Clupea harengus chromosome 24, Ch_v2.0.2, whole genome shotgun sequence.
type: Entry
definition: Clupea harengus chromosome 24, Ch_v2.0.2, whole genome shotgun sequence.
sequence version: NC_045175.1
sequence date: 2021-07-27
sequence: sequence
division: CON
label: NC_045175.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA587748
dblink: SAMEA5339254
keyword: WGS
keyword: RefSeq
source: Clupea harengus (Atlantic herring)
organism: Clupea harengus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupea.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR535880.1.\nAssembly name: Ch_v2.0.2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the UPPSALA UNIVERISTY on\n2019/04/16. The original whole-genome shotgun project has the\naccession CAADHV000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Clupea harengus Annotation Release\n 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 20091098
topology: linear
so has quality: SO_0000987
location: 1..20091098
location: region:1-20091098:1
RO_0002162: 7950

NC_045175
type: RefSeq
SIO_000068: refseq

PRJNA587748
type: BioProject
SIO_000068: bioproject

SAMEA5339254
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20091098:1
position: 20091098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-20091098:1:source
so part of: sequence
organism: Clupea harengus
mol type: genomic DNA
chromosome: 24

7950
type: Taxonomy
SIO_000068: taxonomy

LOC122128784
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC122128784
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5894..6419
location: region:5894-6419:1
so has part: feature:5894-6419:1:exon
subclass of: SO_0000011

122128784
type: Gene
SIO_000068: ncbigene

position:5894:1
position: 5894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6419:1
position: 6419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5894-6419:1:exon

LOC122128784
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7950
nc RNA class: lncRNA
gene: LOC122128784
product: uncharacterized LOC122128784
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_006151608.1
SIO_010081: LOC122128784
subclass of: SO_0000673
so part of: LOC122128784
location: join(5894..5976,6191..6233,6338..6419)
location: region:5894-6419:1
so has part: feature:5894-5976:1:exon
so has part: feature:6191-6233:1:exon
so has part: feature:6338-6419:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5894-5976:1:exon

position:5976:1
position: 5976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6191-6233:1:exon

position:6191:1
position: 6191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6233:1
position: 6233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6338-6419:1:exon

position:6338:1
position: 6338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116219362
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116219362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(18643..25933)
location: region:18643-25933:-1
so has part: feature:18643-25933:-1:exon
subclass of: SO_0000010

116219362
type: Gene
SIO_000068: ncbigene

position:18643:-1
position: 18643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25933:-1
position: 25933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18643-25933:-1:exon

LOC116219362
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC116219362
product: interferon-induced protein 44-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042703572.1
SIO_010081: LOC116219362
subclass of: SO_0000673
so part of: LOC116219362
location: complement(join(18643..19075,19694..19791,20421..20595,21054..21203,22018..22216,22484..22517,23261..23560,23720..23808,25803..25933))
location: region:18643-25933:-1
so has part: feature:25803-25933:-1:exon
so has part: feature:23720-23808:-1:exon
so has part: feature:23261-23560:-1:exon
so has part: feature:22484-22517:-1:exon
so has part: feature:22018-22216:-1:exon
so has part: feature:21054-21203:-1:exon
so has part: feature:20421-20595:-1:exon
so has part: feature:19694-19791:-1:exon
so has part: feature:18643-19075:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25803-25933:-1:exon

position:25803:-1
position: 25803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23720-23808:-1:exon

position:23720:-1
position: 23720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23808:-1
position: 23808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:23261-23560:-1:exon

position:23261:-1
position: 23261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23560:-1
position: 23560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:22484-22517:-1:exon

position:22484:-1
position: 22484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22517:-1
position: 22517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:22018-22216:-1:exon

position:22018:-1
position: 22018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22216:-1
position: 22216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:21054-21203:-1:exon

position:21054:-1
position: 21054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21203:-1
position: 21203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:20421-20595:-1:exon

position:20421:-1
position: 20421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20595:-1
position: 20595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:19694-19791:-1:exon

position:19694:-1
position: 19694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19791:-1
position: 19791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:18643-19075:-1:exon

position:19075:-1
position: 19075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116219362
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC116219362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced protein 44-like
translation: MGTAPLAPQLKGNSTFNQNTDITGISVKRGQDITFRCDANCEVYGTWKKDGLTLHNDGRIIITEPTQYRCFNLTIRDATDEDEGEYTLKLSKWRGDASGSAKVKVLDYAVAWRKIDHQRNDTVKTALREFTPSNPEAQRLRFLLHGPVGAGKSSMANSVNTVFQGRTTVNAHAAPSTGKSETTTYNMYEIKDQHGRKLSFVFNDIMGLEGTETGGVLTADIISALKGHVKDGYKFNPSSPLSGGLYYNNNPTLDEKVHCLVSVMPAHKILLLEETHGLIMKMREVRDVAKNLEIPHVLLMTHVDSCPLVKEDLDKIYFSKKIKIAMENCSVKLGVPMNRIFPVKNYHEENCVDEKVDCVILDALDNIVNFANDYVIRQIE
SIO_010081: LOC116219362
subclass of: SO_0000673
so part of: LOC116219362
location: complement(join(18908..19075,19694..19791,20421..20595,21054..21203,22018..22216,22484..22517,23261..23560,23720..23738))
location: region:18908-23738:-1
so has part: feature:23720-23738:-1:exon
so has part: feature:23261-23560:-1:exon
so has part: feature:22484-22517:-1:exon
so has part: feature:22018-22216:-1:exon
so has part: feature:21054-21203:-1:exon
so has part: feature:20421-20595:-1:exon
so has part: feature:19694-19791:-1:exon
so has part: feature:18908-19075:-1:exon

XP_042559506.1
type: Protein
SIO_000068: ncbiprotein

position:18908:-1
position: 18908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23738:-1
position: 23738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23720-23738:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23261-23560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22484-22517:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22018-22216:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21054-21203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20421-20595:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:19694-19791:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:18908-19075:-1:exon

LOC116219318
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116219318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(28173..36110)
location: region:28173-36110:-1
so has part: feature:28173-36110:-1:exon
subclass of: SO_0000010

116219318
type: Gene
SIO_000068: ncbigene

position:28173:-1
position: 28173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36110:-1
position: 36110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28173-36110:-1:exon

LOC116219318
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC116219318
product: interferon-induced protein 44-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031562522.2
SIO_010081: LOC116219318
subclass of: SO_0000673
so part of: LOC116219318
location: complement(join(28173..28413,29148..29245,30313..30487,30910..31059,31643..31838,32187..32220,32454..32702,33743..33757,33923..34011,35959..36110))
location: region:28173-36110:-1
so has part: feature:35959-36110:-1:exon
so has part: feature:33923-34011:-1:exon
so has part: feature:33743-33757:-1:exon
so has part: feature:32454-32702:-1:exon
so has part: feature:32187-32220:-1:exon
so has part: feature:31643-31838:-1:exon
so has part: feature:30910-31059:-1:exon
so has part: feature:30313-30487:-1:exon
so has part: feature:29148-29245:-1:exon
so has part: feature:28173-28413:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35959-36110:-1:exon

position:35959:-1
position: 35959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33923-34011:-1:exon

position:33923:-1
position: 33923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34011:-1
position: 34011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:33743-33757:-1:exon

position:33743:-1
position: 33743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33757:-1
position: 33757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:32454-32702:-1:exon

position:32454:-1
position: 32454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32702:-1
position: 32702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:32187-32220:-1:exon

position:32187:-1
position: 32187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32220:-1
position: 32220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:31643-31838:-1:exon

position:31643:-1
position: 31643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31838:-1
position: 31838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:30910-31059:-1:exon

position:30910:-1
position: 30910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31059:-1
position: 31059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:30313-30487:-1:exon

position:30313:-1
position: 30313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30487:-1
position: 30487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:29148-29245:-1:exon

position:29148:-1
position: 29148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29245:-1
position: 29245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:28173-28413:-1:exon

position:28413:-1
position: 28413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116219318
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC116219318
product: interferon-induced protein 44-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031562521.2
SIO_010081: LOC116219318
subclass of: SO_0000673
so part of: LOC116219318
location: complement(join(28175..28413,29148..29245,30313..30487,30910..31059,31643..31841,32187..32220,32454..32702,33743..33757,33923..34011,35959..36105))
location: region:28175-36105:-1
so has part: feature:35959-36105:-1:exon
so has part: feature:33923-34011:-1:exon
so has part: feature:33743-33757:-1:exon
so has part: feature:32454-32702:-1:exon
so has part: feature:32187-32220:-1:exon
so has part: feature:31643-31841:-1:exon
so has part: feature:30910-31059:-1:exon
so has part: feature:30313-30487:-1:exon
so has part: feature:29148-29245:-1:exon
so has part: feature:28175-28413:-1:exon

position:28175:-1
position: 28175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36105:-1
position: 36105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35959-36105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33923-34011:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33743-33757:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:32454-32702:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:32187-32220:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31643-31841:-1:exon

position:31841:-1
position: 31841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:30910-31059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:30313-30487:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29148-29245:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28175-28413:-1:exon

LOC116219318
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC116219318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced protein 44-like isoform X2
translation: MGTAPSAPKLKAISVKRGHNITFRWDANCEVDGTWKKDGLTLHNGGRINITEPTQYLCFNLTIRDATDEDEGEYTLKLSNWHGDASGSAKVKVLDFAVAWRKIDHQNDKVKTAQREFTPSNPEAQRLRFLLHGPVGAGKSSIANSVNTVFQGRTTVNAHAAPSTGKSETTTYNMYEVKDEQGRKLSFVFNDIMGLEGTETGGVLTADIISALKGHIKDGYEFNPSSSLSAGLYYNNNPTLDEKVHCLVSVIPADKILLLEESHGLIKKMREVRDVAKNLDIPHVVLMTHVDSCPLVKEDLDKIYFSKKIKIAMENCSVKLGIPMNRIFPVKNYHEENRVDEKVDCVILDALDNIVNFANDYVIRQIE
SIO_010081: LOC116219318
subclass of: SO_0000673
so part of: LOC116219318
location: complement(join(28246..28413,29148..29245,30313..30487,30910..31059,31643..31838,32187..32220,32454..32702,33743..33757,33923..33941))
location: region:28246-33941:-1
so has part: feature:33923-33941:-1:exon
so has part: feature:33743-33757:-1:exon
so has part: feature:32454-32702:-1:exon
so has part: feature:32187-32220:-1:exon
so has part: feature:31643-31838:-1:exon
so has part: feature:30910-31059:-1:exon
so has part: feature:30313-30487:-1:exon
so has part: feature:29148-29245:-1:exon
so has part: feature:28246-28413:-1:exon

XP_031418382.1
type: Protein
SIO_000068: ncbiprotein

position:28246:-1
position: 28246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33941:-1
position: 33941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33923-33941:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33743-33757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32454-32702:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:32187-32220:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31643-31838:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30910-31059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30313-30487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29148-29245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28246-28413:-1:exon

LOC116219318
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC116219318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced protein 44-like isoform X1
translation: MGTAPSAPKLKAISVKRGHNITFRWDANCEVDGTWKKDGLTLHNGGRINITEPTQYLCFNLTIRDATDEDEGEYTLKLSNWHGDASGSAKVKVLDFAVAWRKIDHQRNDKVKTAQREFTPSNPEAQRLRFLLHGPVGAGKSSIANSVNTVFQGRTTVNAHAAPSTGKSETTTYNMYEVKDEQGRKLSFVFNDIMGLEGTETGGVLTADIISALKGHIKDGYEFNPSSSLSAGLYYNNNPTLDEKVHCLVSVIPADKILLLEESHGLIKKMREVRDVAKNLDIPHVVLMTHVDSCPLVKEDLDKIYFSKKIKIAMENCSVKLGIPMNRIFPVKNYHEENRVDEKVDCVILDALDNIVNFANDYVIRQIE
SIO_010081: LOC116219318
subclass of: SO_0000673
so part of: LOC116219318
location: complement(join(28246..28413,29148..29245,30313..30487,30910..31059,31643..31841,32187..32220,32454..32702,33743..33757,33923..33941))
location: region:28246-33941:-1
so has part: feature:33923-33941:-1:exon
so has part: feature:33743-33757:-1:exon
so has part: feature:32454-32702:-1:exon
so has part: feature:32187-32220:-1:exon
so has part: feature:31643-31841:-1:exon
so has part: feature:30910-31059:-1:exon
so has part: feature:30313-30487:-1:exon
so has part: feature:29148-29245:-1:exon
so has part: feature:28246-28413:-1:exon

XP_031418381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33923-33941:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33743-33757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32454-32702:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:32187-32220:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31643-31841:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30910-31059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30313-30487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29148-29245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28246-28413:-1:exon

LOC116219363
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116219363
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 36715..39215
location: region:36715-39215:1
so has part: feature:36715-39215:1:exon
subclass of: SO_0000010

116219363
type: Gene
SIO_000068: ncbigene

position:36715:1
position: 36715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39215:1
position: 39215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36715-39215:1:exon

LOC116219363
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC116219363
product: uncharacterized LOC116219363
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031562644.1
SIO_010081: LOC116219363
subclass of: SO_0000673
so part of: LOC116219363
location: join(36715..37021,37737..38798,39009..39083,39172..39215)
location: region:36715-39215:1
so has part: feature:36715-37021:1:exon
so has part: feature:37737-38798:1:exon
so has part: feature:39009-39083:1:exon
so has part: feature:39172-39215:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36715-37021:1:exon

position:37021:1
position: 37021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37737-38798:1:exon

position:37737:1
position: 37737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38798:1
position: 38798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:39009-39083:1:exon

position:39009:1
position: 39009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39083:1
position: 39083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:39172-39215:1:exon

position:39172:1
position: 39172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116219363
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC116219363
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116219363
translation: MKWTCKLCPFSTYNQRNIRRHYTLKHGHHSRFCPLPCIFTDCFFTFRRQVDLNRHLFKQHGKQQEKGSSDPLTFQILCALCSFCEHCNLKQYLSHLRSHLKNKETVKCPYQDCSFQSTVYSTFTGHLSRYHSSAGIKNLRLELVRNHLCENGEEAQDNTDLLSFNEPVADVLENVEITDEVCLQRKLASLFLRMQTLLHVSKTATQEIIDEFYEVSVLTGELSKKSIEQVLSQHNISLEPSTFTLIADTLDKSVPLSFLSKSGELGTEHKRASFFRQNVKIIEPVEYFLDSAKGRKEVHVPLLPVLTELLNRDDVLDKALDEDVGSNCGFYKSFLDGKYFQENIFFSAEPLLRDIEQLETKGVYIERLGGCVQGFVQEAGRIFRPVK
SIO_010081: LOC116219363
subclass of: SO_0000673
so part of: LOC116219363
location: join(37754..38798,39009..39083,39172..39215)
location: region:37754-39215:1
so has part: feature:37754-38798:1:exon
so has part: feature:39009-39083:1:exon
so has part: feature:39172-39215:1:exon

XP_031418504.1
type: Protein
SIO_000068: ncbiprotein

position:37754:1
position: 37754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37754-38798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39009-39083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:39172-39215:1:exon

LOC116219161
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116219161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 39401..40835
location: region:39401-40835:1
so has part: feature:39401-40835:1:exon
subclass of: SO_0000011

116219161
type: Gene
SIO_000068: ncbigene

position:39401:1
position: 39401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40835:1
position: 40835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39401-40835:1:exon

LOC116219161
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7950
nc RNA class: lncRNA
gene: LOC116219161
product: uncharacterized LOC116219161
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004163096.2
SIO_010081: LOC116219161
subclass of: SO_0000673
so part of: LOC116219161
location: join(39401..39565,40310..40417,40555..40835)
location: region:39401-40835:1
so has part: feature:39401-39565:1:exon
so has part: feature:40310-40417:1:exon
so has part: feature:40555-40835:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39401-39565:1:exon

position:39565:1
position: 39565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:40310-40417:1:exon

position:40310:1
position: 40310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40417:1
position: 40417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:40555-40835:1:exon

position:40555:1
position: 40555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116219364
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116219364
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 40886..43087
location: region:40886-43087:1
so has part: feature:40886-43087:1:exon
subclass of: SO_0000010

116219364
type: Gene
SIO_000068: ncbigene

position:40886:1
position: 40886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43087:1
position: 43087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40886-43087:1:exon

LOC116219364
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC116219364
product: uncharacterized LOC116219364
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_042703647.1
SIO_010081: LOC116219364
subclass of: SO_0000673
so part of: LOC116219364
location: join(40886..41521,41759..41911,42019..42108,42316..43087)
location: region:40886-43087:1
so has part: feature:40886-41521:1:exon
so has part: feature:41759-41911:1:exon
so has part: feature:42019-42108:1:exon
so has part: feature:42316-43087:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40886-41521:1:exon

position:41521:1
position: 41521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:41759-41911:1:exon

position:41759:1
position: 41759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41911:1
position: 41911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:42019-42108:1:exon

position:42019:1
position: 42019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42108:1
position: 42108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:42316-43087:1:exon

position:42316:1
position: 42316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116219364
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC116219364
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116219364
translation: MKNWSEPFSIPTFSYDVELKLKRGNEAYAKDGSRIEVLKGLKSEILDRLVGEMFRIDAYPSQVQIEEVAKALVEKHPCLREVGSTDGWYCWKYSLNFKMGNYRHKLRAAGCTAVLVNKTRMFEDGKTKRKIKKPRRSETNFLPDIPDEDTFTSLEEDRKTLLMEFKKVNPNNKIIDAAMANTYALRRKEIVDDEPLVSVVKSRWPALLSERQILAEFSRLMSTDLLSSFFGGLDEYLPRFLDLFRKKDHIAELQDIARWLDAHDSNQNKRTAVLLGMPHFLREEPSSFLKTCEPTDPVEDTLKGTSVGILIVSEEIGRYVVPIETNDICLVLEEQLAVMNISDIPKAFGLMMGLMYALNVDYPKHLKYTFEVMQKLFLNVGGCSCSSRVNGLRNRLLYKKL
SIO_010081: LOC116219364
subclass of: SO_0000673
so part of: LOC116219364
location: join(40886..41521,41759..41911,42019..42108,42316..42642)
location: region:40886-42642:1
so has part: feature:40886-41521:1:exon
so has part: feature:41759-41911:1:exon
so has part: feature:42019-42108:1:exon
so has part: feature:42316-42642:1:exon

XP_042559581.1
type: Protein
SIO_000068: ncbiprotein

position:42642:1
position: 42642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40886-41521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41759-41911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42019-42108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:42316-42642:1:exon

LOC116219365
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116219365
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 59415..59934
location: region:59415-59934:1
so has part: feature:59415-59934:1:exon
subclass of: SO_0000010

116219365
type: Gene
SIO_000068: ncbigene

position:59415:1
position: 59415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59934:1
position: 59934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59415-59934:1:exon

LOC116219365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC116219365
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immunoglobulin kappa variable 1-27-like
SIO_010081: LOC116219365
subclass of: SO_0000673
so part of: LOC116219365
location: join(59415..59460,59609..59934)
location: region:59415-59934:1
so has part: feature:59415-59460:1:exon
so has part: feature:59609-59934:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59415-59460:1:exon

position:59460:1
position: 59460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59609-59934:1:exon

position:59609:1
position: 59609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116219365
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 7950
gene: LOC116219365
standard name: immunoglobulin kappa variable 1-27-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
SIO_010081: LOC116219365
subclass of: SO_0000673
so part of: LOC116219365
location: join(59415..59460,59609..59934)
location: region:59415-59934:1
so has part: feature:59415-59460:1:exon
so has part: feature:59609-59934:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59415-59460:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59609-59934:1:exon

LOC122128812
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC122128812
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 61982..65983
location: region:61982-65983:1
so has part: feature:61982-65983:1:exon
subclass of: SO_0000010

122128812
type: Gene
SIO_000068: ncbigene

position:61982:1
position: 61982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65983:1
position: 65983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61982-65983:1:exon

LOC122128812
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC122128812
product: uncharacterized LOC122128812
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_042703648.1
SIO_010081: LOC122128812
subclass of: SO_0000673
so part of: LOC122128812
location: join(61982..62020,62157..65983)
location: region:61982-65983:1
so has part: feature:61982-62020:1:exon
so has part: feature:62157-65983:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61982-62020:1:exon

position:62020:1
position: 62020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:62157-65983:1:exon

position:62157:1
position: 62157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122128812
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC122128812
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC122128812
translation: MAAEALGKTLDQLKKYRMVAKTSLTKQANYLSRKAGYLTELELRQEFAKLSADSRKVIEANDDYRTGLEAELAAKEDGKDDVLSLEQDADLSKYGSECEQKFNDVKQIVQTNLWSRYGSEMLEAAFEEAEKACRHTYGLPVESSNCEGFEIQHNVVGKLIKETSDAFAAWESWIPAAEERDFRKRSRELRVAYNELDMRKGEFARARRISVEKQGTGVKQEHTGPTIPVVRIKPTKLPTFSGCKRDFHRWRTDWESLQKQGEPTGSPEVKKIQLLDSVEEKIVKDLRLSTYSTADDVFRVLANRYGNKCAIALEIVDELEKIQPVRGNQPRKVVDLIQTIGKALADLTDLGSTGAIKNPLVVRSLESKLPEGLKKDWLMFMVDPSNDVTEDKHFDMLLAFLKKQEEIFERLEHLQITDKPESSDKAERTFNKKYASTQATKGEDAEDGCIICGDEKHKDRIFFCKKFRALKLSEKEAAVERIGACRECLGCHEYDDGCRDTYLCRNVDCKKRGSSDHHFFLCPRGNSKRRELEKPQTDDRDKKNLTEEQKRFLGELTPELAERCRKAFTNNSSNVSCPAKNQVSLLKESGLRELPVIMMLMEVTANAGQKIGALVDLASDTNYITHKAAKRLNLRSEKITLIVHGVGGMATKVATRRYLLRVRIKTSKGTERAHELICYGLKEIAKVHRAVKPEELTRFFPEVEPEELRRPEQIELLISHREGRLAPQRVKVVGDLVLWESPLGKTVGGAHPDLFEQVNMTAHESKTHFARSMRTAAIKYEEIPAEVPFMTKTVHMQDTIGEARHTAATHRDVLECKEARRILEEDSYTDDVLTSHNNANRLSKVTKEIEEILQAGGFSLKPWVQSTQSGRQERGVADTTTRTPSETHKTFVLPSQSAEEVVTDARDSISKLQRKAFSAVMTRGQVKRCRGVTTQDHTKAEDSVEKNDTDPTHLIVCPDASGTDPEMRQGEVVLRVALSNSAFKNLLEVNRFSCLSRLVNVVAWVRRAADSWLGLKNQTPKKSKWEASPSKEEGSYEVKDEVKKRVRLKVWGIVFSCMASRAIHTDIVSDMSAEGFHSKLSPAGASLRGDPGDFQFEGYPYKRLRVIQSEVNKFWKKWCQLAGPNLFVRSKWHAPEKSDVTSLGSGTRSSSGRCAVRL
SIO_010081: LOC122128812
subclass of: SO_0000673
so part of: LOC122128812
location: 62507..65983
location: region:62507-65983:1
so has part: feature:62507-65983:1:exon

XP_042559582.1
type: Protein
SIO_000068: ncbiprotein

position:62507:1
position: 62507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62507-65983:1:exon

LOC116219212
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116219212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 149385..150996
location: region:149385-150996:1
so has part: feature:149385-150996:1:exon
subclass of: SO_0000011

116219212
type: Gene
SIO_000068: ncbigene

position:149385:1
position: 149385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150996:1
position: 150996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149385-150996:1:exon

LOC116219212
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7950
nc RNA class: lncRNA
gene: LOC116219212
product: uncharacterized LOC116219212
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004163120.2
SIO_010081: LOC116219212
subclass of: SO_0000673
so part of: LOC116219212
location: join(149385..149615,150525..150564,150664..150996)
location: region:149385-150996:1
so has part: feature:149385-149615:1:exon
so has part: feature:150525-150564:1:exon
so has part: feature:150664-150996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:149385-149615:1:exon

position:149615:1
position: 149615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:150525-150564:1:exon

position:150525:1
position: 150525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150564:1
position: 150564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:150664-150996:1:exon

position:150664:1
position: 150664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105906189
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105906189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(166683..189838)
location: region:166683-189838:-1
so has part: feature:166683-189838:-1:exon
subclass of: SO_0000010

105906189
type: Gene
SIO_000068: ncbigene

position:166683:-1
position: 166683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189838:-1
position: 189838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166683-189838:-1:exon

LOC105906189
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105906189
product: interferon-induced protein 44-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031562338.1
SIO_010081: LOC105906189
subclass of: SO_0000673
so part of: LOC105906189
location: complement(join(166683..166921,171025..171125,172205..172379,173601..173750,186834..187032,187268..187752,189822..189838))
location: region:166683-189838:-1
so has part: feature:189822-189838:-1:exon
so has part: feature:187268-187752:-1:exon
so has part: feature:186834-187032:-1:exon
so has part: feature:173601-173750:-1:exon
so has part: feature:172205-172379:-1:exon
so has part: feature:171025-171125:-1:exon
so has part: feature:166683-166921:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189822-189838:-1:exon

position:189822:-1
position: 189822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:187268-187752:-1:exon

position:187268:-1
position: 187268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187752:-1
position: 187752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:186834-187032:-1:exon

position:186834:-1
position: 186834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187032:-1
position: 187032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:173601-173750:-1:exon

position:173601:-1
position: 173601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173750:-1
position: 173750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:172205-172379:-1:exon

position:172205:-1
position: 172205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172379:-1
position: 172379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:171025-171125:-1:exon

position:171025:-1
position: 171025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171125:-1
position: 171125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:166683-166921:-1:exon

position:166921:-1
position: 166921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105906189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105906189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced protein 44-like
translation: MLCVCIAEYNVAWRKIDSQENYPVKTNLQKFTPGSPEARRLRFLLHGPVGAGKSSIANSINSVFQGRIKRNAHVAPSSGESETKKYKTYEIKDQQGKKLSFVFNDMMGVEYTETGGVLTADIISALKGHIKDGYVFNELSPLSDGLYYNSNPTLDDKVHCLVSVISADKILLLEETHGLIKKMREVRVVAKNLDIPHVVLMTHVDSCCPLVKDDLDKIYISKKIKQAMQDCSIKLGVSMNRIFPMKNYHEELDINEKVDALILHVLHNIVDYANDYVIEQTED
SIO_010081: LOC105906189
subclass of: SO_0000673
so part of: LOC105906189
location: complement(join(166751..166921,171025..171125,172205..172379,173601..173750,186834..187032,187268..187323))
location: region:166751-187323:-1
so has part: feature:187268-187323:-1:exon
so has part: feature:186834-187032:-1:exon
so has part: feature:173601-173750:-1:exon
so has part: feature:172205-172379:-1:exon
so has part: feature:171025-171125:-1:exon
so has part: feature:166751-166921:-1:exon

XP_031418198.1
type: Protein
SIO_000068: ncbiprotein

position:166751:-1
position: 166751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187323:-1
position: 187323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187268-187323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186834-187032:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:173601-173750:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172205-172379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171025-171125:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:166751-166921:-1:exon

LOC116219339
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116219339
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 204418..205130
location: region:204418-205130:1
so has part: feature:204418-205130:1:exon
subclass of: SO_0000011

116219339
type: Gene
SIO_000068: ncbigene

position:204418:1
position: 204418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205130:1
position: 205130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204418-205130:1:exon

LOC116219339
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7950
nc RNA class: lncRNA
gene: LOC116219339
product: uncharacterized LOC116219339
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004163166.1
SIO_010081: LOC116219339
subclass of: SO_0000673
so part of: LOC116219339
location: join(204418..204443,204688..204753,205100..205130)
location: region:204418-205130:1
so has part: feature:204418-204443:1:exon
so has part: feature:204688-204753:1:exon
so has part: feature:205100-205130:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204418-204443:1:exon

position:204443:1
position: 204443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:204688-204753:1:exon

position:204688:1
position: 204688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204753:1
position: 204753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:205100-205130:1:exon

position:205100:1
position: 205100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116219336
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116219336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(226672..246505)
location: region:226672-246505:-1
so has part: feature:226672-246505:-1:exon
subclass of: SO_0000010

116219336
type: Gene
SIO_000068: ncbigene

position:226672:-1
position: 226672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246505:-1
position: 246505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226672-246505:-1:exon

LOC116219336
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC116219336
product: interferon-induced protein 44-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_031562589.2
SIO_010081: LOC116219336
subclass of: SO_0000673
so part of: LOC116219336
location: complement(join(226672..227680,228128..228228,235915..236089,238175..238324,245289..245487,245879..245912,246109..246505))
location: region:226672-246505:-1
so has part: feature:246109-246505:-1:exon
so has part: feature:245879-245912:-1:exon
so has part: feature:245289-245487:-1:exon
so has part: feature:238175-238324:-1:exon
so has part: feature:235915-236089:-1:exon
so has part: feature:228128-228228:-1:exon
so has part: feature:226672-227680:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246109-246505:-1:exon

position:246109:-1
position: 246109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245879-245912:-1:exon

position:245879:-1
position: 245879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245912:-1
position: 245912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:245289-245487:-1:exon

position:245289:-1
position: 245289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245487:-1
position: 245487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:238175-238324:-1:exon

position:238175:-1
position: 238175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238324:-1
position: 238324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:235915-236089:-1:exon

position:235915:-1
position: 235915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236089:-1
position: 236089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:228128-228228:-1:exon

position:228128:-1
position: 228128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228228:-1
position: 228228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:226672-227680:-1:exon

position:227680:-1
position: 227680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116219336
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC116219336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced protein 44-like
translation: MLHTAKNRTFDTLMSYYILYIICVFLNLFISDISVKRGQAITFWWDANCEVKGKWKKDGLTLHNGGRITINQSEDSLSFSLTISKATGEDEGGYTLELSNRKGQVSGSAKVKLLDYALAWRTMDCQANDAVKTALREFRPSNPEAQRLRFLLHGPVGAGKSSIVNSINTVFQGRIKVNAHAPPGTDTTETKTYKTHKIENQQGNELSFVFNDLMGLERQKRCGVLPDDIISAIKGHIIDGYEFNPTSELKTGRYYNSNPTLDDKVHCLVCVIPANKIPLLEEHDIVIMKMKEVGDDVKILEIPRVVLMTHVDKCCPLVNEDLGKIYFSKKVKIAMQDCSIKLGVPMNCIFPVKNYHEENCLDKKMDCLILDALNKIVDFANDYVKKQIE
SIO_010081: LOC116219336
subclass of: SO_0000673
so part of: LOC116219336
location: complement(join(227513..227680,228128..228228,235915..236089,238175..238324,245289..245487,245879..245912,246109..246451))
location: region:227513-246451:-1
so has part: feature:246109-246451:-1:exon
so has part: feature:245879-245912:-1:exon
so has part: feature:245289-245487:-1:exon
so has part: feature:238175-238324:-1:exon
so has part: feature:235915-236089:-1:exon
so has part: feature:228128-228228:-1:exon
so has part: feature:227513-227680:-1:exon

XP_031418449.2
type: Protein
SIO_000068: ncbiprotein

position:227513:-1
position: 227513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246451:-1
position: 246451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246109-246451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245879-245912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245289-245487:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:238175-238324:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235915-236089:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228128-228228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227513-227680:-1:exon

LOC116219154
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116219154
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(304948..306963)
location: region:304948-306963:-1
so has part: feature:304948-306963:-1:exon
subclass of: SO_0000010

116219154
type: Gene
SIO_000068: ncbigene

position:304948:-1
position: 304948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306963:-1
position: 306963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304948-306963:-1:exon

LOC116219154
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC116219154
product: deleted in malignant brain tumors 1 protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031562159.2
SIO_010081: LOC116219154
subclass of: SO_0000673
so part of: LOC116219154
location: complement(join(304948..305444,305912..306963))
location: region:304948-306963:-1
so has part: feature:305912-306963:-1:exon
so has part: feature:304948-305444:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:305912-306963:-1:exon

position:305912:-1
position: 305912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:304948-305444:-1:exon

position:305444:-1
position: 305444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116219154
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC116219154
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deleted in malignant brain tumors 1 protein-like
translation: MNTSSVLCHQLNCGRAVAVVGAEWFGEGSGSIWPDVFVCEGNETGLSECGISWWSRAACSHRQDAGVICSGSSFPLDNGTVRLSGRSRCEGEVEVLFSQRWRRVLLDSWNRSEASVVCRQLACGSADGFSGSAETEVDGCVSGFRCSGHETHLRNCSTPHMLNCSSILHVTIVCSGVYISKSDSDPVAELSICLSAIICTNHELSHLTIIHSTH
SIO_010081: LOC116219154
subclass of: SO_0000673
so part of: LOC116219154
location: complement(join(305011..305444,305912..306122))
location: region:305011-306122:-1
so has part: feature:305912-306122:-1:exon
so has part: feature:305011-305444:-1:exon

XP_031418019.1
type: Protein
SIO_000068: ncbiprotein

position:305011:-1
position: 305011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306122:-1
position: 306122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305912-306122:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305011-305444:-1:exon

LOC116219369
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116219369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(309411..313239)
location: region:309411-313239:-1
so has part: feature:309411-313239:-1:exon

116219369
type: Gene
SIO_000068: ncbigene

position:309411:-1
position: 309411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313239:-1
position: 313239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309411-313239:-1:exon

LOC116219369
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219369
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219369
subclass of: SO_0000673
so part of: LOC116219369
location: complement(309411..309789)
location: region:309411-309789:-1
so has part: feature:309411-309789:-1:exon

position:309789:-1
position: 309789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309411-309789:-1:exon

LOC116219369
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219369
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219369
subclass of: SO_0000673
so part of: LOC116219369
location: complement(310351..310517)
location: region:310351-310517:-1
so has part: feature:310351-310517:-1:exon

position:310351:-1
position: 310351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310517:-1
position: 310517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310351-310517:-1:exon

LOC116219369
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219369
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219369
subclass of: SO_0000673
so part of: LOC116219369
location: complement(310800..310896)
location: region:310800-310896:-1
so has part: feature:310800-310896:-1:exon

position:310800:-1
position: 310800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310896:-1
position: 310896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310800-310896:-1:exon

LOC116219369
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219369
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219369
subclass of: SO_0000673
so part of: LOC116219369
location: complement(311126..311300)
location: region:311126-311300:-1
so has part: feature:311126-311300:-1:exon

position:311126:-1
position: 311126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311300:-1
position: 311300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311126-311300:-1:exon

LOC116219369
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219369
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219369
subclass of: SO_0000673
so part of: LOC116219369
location: complement(313187..313239)
location: region:313187-313239:-1
so has part: feature:313187-313239:-1:exon

position:313187:-1
position: 313187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313187-313239:-1:exon

LOC105892661
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105892661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 322045..327243
location: region:322045-327243:1
so has part: feature:322045-327243:1:exon
subclass of: SO_0000010

105892661
type: Gene
SIO_000068: ncbigene

position:322045:1
position: 322045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327243:1
position: 327243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322045-327243:1:exon

LOC105892661
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105892661
product: microfibril-associated glycoprotein 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031562157.2
SIO_010081: LOC105892661
subclass of: SO_0000673
so part of: LOC105892661
location: join(322045..323221,323438..323461,324162..324374,324624..324720,324983..325150,326193..327243)
location: region:322045-327243:1
so has part: feature:322045-323221:1:exon
so has part: feature:323438-323461:1:exon
so has part: feature:324162-324374:1:exon
so has part: feature:324624-324720:1:exon
so has part: feature:324983-325150:1:exon
so has part: feature:326193-327243:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:322045-323221:1:exon

position:323221:1
position: 323221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:323438-323461:1:exon

position:323438:1
position: 323438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323461:1
position: 323461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:324162-324374:1:exon

position:324162:1
position: 324162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324374:1
position: 324374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:324624-324720:1:exon

position:324624:1
position: 324624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324720:1
position: 324720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:324983-325150:1:exon

position:324983:1
position: 324983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325150:1
position: 325150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:326193-327243:1:exon

position:326193:1
position: 326193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105892661
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105892661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microfibril-associated glycoprotein 4-like
translation: MMVYWSLALLLPLLVQSLPITEEDLPIDCEDVFRNGSIHNGVYTIYPVGQEVPMEVYCDMGCTDNENHQSHWTVIMRRMDGTVNFDRPYSHYEEGFGNKNGEYWLGLQNMHLLTYRTKYMLRVDMEDFEGGKVYALYGTFFLESESDGYRLRVIDFSNGGAGDSLANHNGQRFSTFDRDQDAWYWGQCNQDHKWGGFWFHHCTNANTNGRYQWKNYRVNDGSGLNWSGWTVSSLKAISMKVRRLSLDD
SIO_010081: LOC105892661
subclass of: SO_0000673
so part of: LOC105892661
location: join(323456..323461,324162..324374,324624..324720,324983..325150,326193..326455)
location: region:323456-326455:1
so has part: feature:323456-323461:1:exon
so has part: feature:324162-324374:1:exon
so has part: feature:324624-324720:1:exon
so has part: feature:324983-325150:1:exon
so has part: feature:326193-326455:1:exon

XP_031418017.1
type: Protein
SIO_000068: ncbiprotein

position:323456:1
position: 323456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326455:1
position: 326455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323456-323461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324162-324374:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324624-324720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:324983-325150:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:326193-326455:1:exon

LOC122128738
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC122128738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(335281..337202)
location: region:335281-337202:-1
so has part: feature:335281-337202:-1:exon
subclass of: SO_0000011

122128738
type: Gene
SIO_000068: ncbigene

position:335281:-1
position: 335281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337202:-1
position: 337202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335281-337202:-1:exon

LOC122128738
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7950
nc RNA class: lncRNA
gene: LOC122128738
product: uncharacterized LOC122128738
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_006151594.1
SIO_010081: LOC122128738
subclass of: SO_0000673
so part of: LOC122128738
location: complement(join(335281..335732,336153..336209,336580..336669,336809..336883,337037..337202))
location: region:335281-337202:-1
so has part: feature:337037-337202:-1:exon
so has part: feature:336809-336883:-1:exon
so has part: feature:336580-336669:-1:exon
so has part: feature:336153-336209:-1:exon
so has part: feature:335281-335732:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:337037-337202:-1:exon

position:337037:-1
position: 337037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336809-336883:-1:exon

position:336809:-1
position: 336809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336883:-1
position: 336883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:336580-336669:-1:exon

position:336580:-1
position: 336580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336669:-1
position: 336669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:336153-336209:-1:exon

position:336153:-1
position: 336153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336209:-1
position: 336209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:335281-335732:-1:exon

position:335732:-1
position: 335732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105910454
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105910454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(340589..352739)
location: region:340589-352739:-1
so has part: feature:340589-352739:-1:exon
subclass of: SO_0000010

105910454
type: Gene
SIO_000068: ncbigene

position:340589:-1
position: 340589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352739:-1
position: 352739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340589-352739:-1:exon

LOC105910454
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105910454
product: scavenger receptor cysteine-rich type 1 protein M130-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031562647.2
SIO_010081: LOC105910454
subclass of: SO_0000673
so part of: LOC105910454
location: complement(join(340589..340935,341406..341615,341881..342195,342753..343067,343586..343900,344046..344357,344996..345175,345506..345694,345789..346097,349258..349354,352611..352739))
location: region:340589-352739:-1
so has part: feature:352611-352739:-1:exon
so has part: feature:349258-349354:-1:exon
so has part: feature:345789-346097:-1:exon
so has part: feature:345506-345694:-1:exon
so has part: feature:344996-345175:-1:exon
so has part: feature:344046-344357:-1:exon
so has part: feature:343586-343900:-1:exon
so has part: feature:342753-343067:-1:exon
so has part: feature:341881-342195:-1:exon
so has part: feature:341406-341615:-1:exon
so has part: feature:340589-340935:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352611-352739:-1:exon

position:352611:-1
position: 352611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:349258-349354:-1:exon

position:349258:-1
position: 349258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349354:-1
position: 349354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:345789-346097:-1:exon

position:345789:-1
position: 345789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346097:-1
position: 346097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:345506-345694:-1:exon

position:345506:-1
position: 345506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345694:-1
position: 345694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:344996-345175:-1:exon

position:344996:-1
position: 344996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345175:-1
position: 345175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:344046-344357:-1:exon

position:344046:-1
position: 344046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344357:-1
position: 344357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:343586-343900:-1:exon

position:343586:-1
position: 343586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343900:-1
position: 343900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:342753-343067:-1:exon

position:342753:-1
position: 342753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343067:-1
position: 343067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:341881-342195:-1:exon

position:341881:-1
position: 341881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342195:-1
position: 342195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:341406-341615:-1:exon

position:341406:-1
position: 341406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341615:-1
position: 341615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:340589-340935:-1:exon

position:340935:-1
position: 340935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105910454
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105910454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scavenger receptor cysteine-rich type 1 protein M130-like
translation: MCKLGRGTETQRQTSESKAQGRGIGNKRYNTEKGTIIQGKKEISQAAPPPPLSVRDFDLEPAAMPASKAILAAESPRVPRLSNGSKFCSGRVELLHNTTWASVCGAAFDWQDAEVVCRELDCGAPVEVLGAAAFGEGKGQLWSEEIQCGGNETHIQLCPTSALNHSCSHENDVGLTCRDALRLVNGSSRCSGRVEVLHRQQWGSVCGNGWDPRDAAVVCRELGCGDAIEALKGAYFGPGSGRVKLVGRSHCSGRVELLHKETRHTVCDAAFDWQDAEVVCRDLDCGAPVEVQVWSEEIQCREHRAPKLVNGSHQCSGRVEVEHGITWGTVCDAAFDWQDAEVVCRELDCGALVEVLGASAFGEGKEQMWSEEIQCGGNETHIQLCPTSALNHSCSHDRDVGLVCSGYTDARLANGTDSCSGRVELKYLSEWGTVCDASWDMNASSVLCHHLNCGRAVAVVGAEWFGEGSGSIWPDVFVCEGNETGLSECGISSWSRAACSHRQDAGVICSGSSFPLDNGTVRLSGRSRCEGEVEVLFSQRWRRVLLDSWNRSEASVVCRQLACGSAVGFSGSAETEGDGCVSGFRCSGHETHLGNCSTPQMLNCSSSLHVTIVCSGHRPVRLVGSGGDCAGRLEVSHNGSWGTVCDDSWDIEDAQVVCRQLQCGTALRAEVPASFHPGDVPIWLSEVGCAGDETSLWECPSAGWGRHDCSHKEDVWVMCSEFIQLRQNTNDYEPCKGVIEVYYNGTWGKICFNDMDKDTGSVICQQLGCVGFGKTYAVGSTIGQRLSPPRCAPGLRLVGGLTHCSGRVEVLLQGKWGTVCDDSWDKKDAQVVCRQLDCGEPVDVGGEQGTFGRGNGAIWLDEVNCTGNEHHLLDCCRAPLKQIDCTHKEDAWVNCTGGGAPTCCR
SIO_010081: LOC105910454
subclass of: SO_0000673
so part of: LOC105910454
location: complement(join(340589..340935,341406..341615,341881..342195,342753..343067,343586..343900,344046..344357,344996..345175,345506..345694,345789..346097,349258..349354,352611..352739))
location: region:340589-352739:-1
so has part: feature:352611-352739:-1:exon
so has part: feature:349258-349354:-1:exon
so has part: feature:345789-346097:-1:exon
so has part: feature:345506-345694:-1:exon
so has part: feature:344996-345175:-1:exon
so has part: feature:344046-344357:-1:exon
so has part: feature:343586-343900:-1:exon
so has part: feature:342753-343067:-1:exon
so has part: feature:341881-342195:-1:exon
so has part: feature:341406-341615:-1:exon
so has part: feature:340589-340935:-1:exon

XP_031418507.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352611-352739:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:349258-349354:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:345789-346097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345506-345694:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:344996-345175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344046-344357:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343586-343900:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342753-343067:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341881-342195:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:341406-341615:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340589-340935:-1:exon

LOC116219370
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116219370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(371611..381424)
location: region:371611-381424:-1
so has part: feature:371611-381424:-1:exon
subclass of: SO_0000010

116219370
type: Gene
SIO_000068: ncbigene

position:371611:-1
position: 371611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381424:-1
position: 381424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371611-381424:-1:exon

LOC116219370
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC116219370
product: anoctamin-9-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042703649.1
SIO_010081: LOC116219370
subclass of: SO_0000673
so part of: LOC116219370
location: complement(join(371611..371692,371976..372090,374224..374371,374606..374758,375421..375617,375929..375960,376186..376243,376605..376695,376876..376912,377253..377420,379289..379371,379833..379893,380168..380261,380547..380681,381408..381424))
location: region:371611-381424:-1
so has part: feature:381408-381424:-1:exon
so has part: feature:380547-380681:-1:exon
so has part: feature:380168-380261:-1:exon
so has part: feature:379833-379893:-1:exon
so has part: feature:379289-379371:-1:exon
so has part: feature:377253-377420:-1:exon
so has part: feature:376876-376912:-1:exon
so has part: feature:376605-376695:-1:exon
so has part: feature:376186-376243:-1:exon
so has part: feature:375929-375960:-1:exon
so has part: feature:375421-375617:-1:exon
so has part: feature:374606-374758:-1:exon
so has part: feature:374224-374371:-1:exon
so has part: feature:371976-372090:-1:exon
so has part: feature:371611-371692:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:381408-381424:-1:exon

position:381408:-1
position: 381408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:380547-380681:-1:exon

position:380547:-1
position: 380547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380681:-1
position: 380681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:380168-380261:-1:exon

position:380168:-1
position: 380168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380261:-1
position: 380261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:379833-379893:-1:exon

position:379833:-1
position: 379833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379893:-1
position: 379893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:379289-379371:-1:exon

position:379289:-1
position: 379289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379371:-1
position: 379371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:377253-377420:-1:exon

position:377253:-1
position: 377253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377420:-1
position: 377420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:376876-376912:-1:exon

position:376876:-1
position: 376876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376912:-1
position: 376912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:376605-376695:-1:exon

position:376605:-1
position: 376605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376695:-1
position: 376695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:376186-376243:-1:exon

position:376186:-1
position: 376186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376243:-1
position: 376243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:375929-375960:-1:exon

position:375929:-1
position: 375929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375960:-1
position: 375960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:375421-375617:-1:exon

position:375421:-1
position: 375421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375617:-1
position: 375617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:374606-374758:-1:exon

position:374606:-1
position: 374606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374758:-1
position: 374758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:374224-374371:-1:exon

position:374224:-1
position: 374224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374371:-1
position: 374371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:371976-372090:-1:exon

position:371976:-1
position: 371976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372090:-1
position: 372090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:371611-371692:-1:exon

position:371692:-1
position: 371692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116219370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC116219370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-9-like
translation: MYDLSWEYFGEKVALYYLWLGWYTFLLVPAVVVGVIIVLYGLAFFKTSPLIQEVCASPVIMCPRCDKECNVTKLNETCSYAKVSQLFDNEGTVAFAMFMAIWATLFLELWKRHRAKYVSRWKVSVWNDEELIVIIGLTHALVVSRLVVRVFLSEQDHWGLLKKHADSAAVMLGAILHYITMQVMTRVDRVVAFKLCEIATERSFTVKMFTFQFFTLFSSLIYIAFFLGRINGHPGNYVRLAGKWRLQETLNNIFEFTIPWFQRCFRQTKAKKLQRSCGNCYRKACRRKDGKVEPCDTCKIRDWMQNYHLNDVNAFSLFNEYLEMVMQFSFTTIFVAVFPLAPLLALINNLFEIRLDAMKMVSLERRLVPKKTNNIGVWTKVLDAIGVLAVIANGLVIGISSDFIPRLVYRYHYGPCANGTATDLDCMTGYINDTLISSHLQGLHPPADDVRRWSRHSQRHTVQL
SIO_010081: LOC116219370
subclass of: SO_0000673
so part of: LOC116219370
location: complement(join(371687..371692,371976..372090,374224..374371,374606..374758,375421..375617,375929..375960,376186..376243,376605..376695,376876..376912,377253..377420,379289..379371,379833..379893,380168..380261,380547..380681,381408..381424))
location: region:371687-381424:-1
so has part: feature:381408-381424:-1:exon
so has part: feature:380547-380681:-1:exon
so has part: feature:380168-380261:-1:exon
so has part: feature:379833-379893:-1:exon
so has part: feature:379289-379371:-1:exon
so has part: feature:377253-377420:-1:exon
so has part: feature:376876-376912:-1:exon
so has part: feature:376605-376695:-1:exon
so has part: feature:376186-376243:-1:exon
so has part: feature:375929-375960:-1:exon
so has part: feature:375421-375617:-1:exon
so has part: feature:374606-374758:-1:exon
so has part: feature:374224-374371:-1:exon
so has part: feature:371976-372090:-1:exon
so has part: feature:371687-371692:-1:exon

XP_042559583.1
type: Protein
SIO_000068: ncbiprotein

position:371687:-1
position: 371687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381408-381424:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:380547-380681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:380168-380261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:379833-379893:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379289-379371:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:377253-377420:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:376876-376912:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:376605-376695:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:376186-376243:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:375929-375960:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:375421-375617:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:374606-374758:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:374224-374371:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:371976-372090:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:371687-371692:-1:exon

LOC122128813
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC122128813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(382249..385754)
location: region:382249-385754:-1
so has part: feature:382249-385754:-1:exon
subclass of: SO_0000010

122128813
type: Gene
SIO_000068: ncbigene

position:382249:-1
position: 382249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385754:-1
position: 385754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382249-385754:-1:exon

LOC122128813
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC122128813
product: scavenger receptor cysteine-rich type 1 protein M130-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042703650.1
SIO_010081: LOC122128813
subclass of: SO_0000673
so part of: LOC122128813
location: complement(join(382249..382340,383359..383673,384225..384539,385048..385754))
location: region:382249-385754:-1
so has part: feature:385048-385754:-1:exon
so has part: feature:384225-384539:-1:exon
so has part: feature:383359-383673:-1:exon
so has part: feature:382249-382340:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:385048-385754:-1:exon

position:385048:-1
position: 385048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:384225-384539:-1:exon

position:384225:-1
position: 384225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384539:-1
position: 384539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:383359-383673:-1:exon

position:383359:-1
position: 383359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383673:-1
position: 383673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:382249-382340:-1:exon

position:382340:-1
position: 382340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122128813
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC122128813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scavenger receptor cysteine-rich type 1 protein M130-like
translation: MKTKASSLSLPCPGYTDARLANGTDSCSGRVELKYLSEWGTVCDASWDMNASSVLCHQLNCGRAVAVVGAEWFGEGSGSIWPDVFVCEGNETGLSECGITWWSRAACSHRQDAGVICSGSFFPLDNGTVRLSGRSRCEGEVEVLFSQRWRRVLLDSWNRSEASVVCRQLACGSAVGFSGSAETEGDGCVSGFRCSGHETHLGNCSTPQMLNCSSSLHVTIVCSGHQPVRLVGSGGDCAGRLEVSHNGSWGTVCDDSWDREDAQVVCRQLQCGTALRAEVPASFHPGDVPIWLSEVGCAGDETSLWECPSAGWGHHDCSHKEDVWVMCSGKVGDGCDDSWDKKDAQVVCRQLDCGSLWM
SIO_010081: LOC122128813
subclass of: SO_0000673
so part of: LOC122128813
location: complement(join(382249..382340,383359..383673,384225..384539,385048..385402))
location: region:382249-385402:-1
so has part: feature:385048-385402:-1:exon
so has part: feature:384225-384539:-1:exon
so has part: feature:383359-383673:-1:exon
so has part: feature:382249-382340:-1:exon

XP_042559584.1
type: Protein
SIO_000068: ncbiprotein

position:385402:-1
position: 385402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385048-385402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384225-384539:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383359-383673:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:382249-382340:-1:exon

LOC122128814
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC122128814
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(386280..387833)
location: region:386280-387833:-1
so has part: feature:386280-387833:-1:exon
subclass of: SO_0000010

122128814
type: Gene
SIO_000068: ncbigene

position:386280:-1
position: 386280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387833:-1
position: 387833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386280-387833:-1:exon

LOC122128814
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC122128814
product: deleted in malignant brain tumors 1 protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042703651.1
SIO_010081: LOC122128814
subclass of: SO_0000673
so part of: LOC122128814
location: complement(join(386280..386721,387052..387360,387530..387833))
location: region:386280-387833:-1
so has part: feature:387530-387833:-1:exon
so has part: feature:387052-387360:-1:exon
so has part: feature:386280-386721:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:387530-387833:-1:exon

position:387530:-1
position: 387530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:387052-387360:-1:exon

position:387052:-1
position: 387052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387360:-1
position: 387360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:386280-386721:-1:exon

position:386721:-1
position: 386721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122128814
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC122128814
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deleted in malignant brain tumors 1 protein
translation: MRARLSNGSKPCSGRVELLQETRHTVCEAAFDRQDAEVVCRELDCGAPVEVLGAATFGEGKGQVWSEEIQCGGNETQIHLCPTSALKTNCSHDKDVGLVCSDPLRLVNGSSRCSGRVEVYHAGEWGSVCGNGWDPRDAAVVCRELGCGEAIEALKDAYFGPGSGSIWMSDVQCVGSESTLKDCRSQRWVAENCGHHQDAGVMCSGVKLVGRSHCSGRVELLHTETKHTVCDAAFDWQDAKVVCRELDCGAPVEVLGAAAFGEGKGQVWSEEIQCGGNETQIQLCPTSALNVNCSHDRDVGLVCSGNVRVYI
SIO_010081: LOC122128814
subclass of: SO_0000673
so part of: LOC122128814
location: complement(join(386399..386721,387052..387360,387530..387833))
location: region:386399-387833:-1
so has part: feature:387530-387833:-1:exon
so has part: feature:387052-387360:-1:exon
so has part: feature:386399-386721:-1:exon

XP_042559585.1
type: Protein
SIO_000068: ncbiprotein

position:386399:-1
position: 386399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387530-387833:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387052-387360:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:386399-386721:-1:exon

LOC105895424
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105895424
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 413088..442613
location: region:413088-442613:1
so has part: feature:413088-442613:1:exon
subclass of: SO_0000010

105895424
type: Gene
SIO_000068: ncbigene

position:413088:1
position: 413088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442613:1
position: 442613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413088-442613:1:exon

LOC105895424
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105895424
product: deleted in malignant brain tumors 1 protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042703652.1
SIO_010081: LOC105895424
subclass of: SO_0000673
so part of: LOC105895424
location: join(413088..413283,413539..413847,435807..436115,436210..436518,436723..436986,442480..442613)
location: region:413088-442613:1
so has part: feature:413088-413283:1:exon
so has part: feature:413539-413847:1:exon
so has part: feature:435807-436115:1:exon
so has part: feature:436210-436518:1:exon
so has part: feature:436723-436986:1:exon
so has part: feature:442480-442613:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:413088-413283:1:exon

position:413283:1
position: 413283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:413539-413847:1:exon

position:413539:1
position: 413539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413847:1
position: 413847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:435807-436115:1:exon

position:435807:1
position: 435807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436115:1
position: 436115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:436210-436518:1:exon

position:436210:1
position: 436210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436518:1
position: 436518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:436723-436986:1:exon

position:436723:1
position: 436723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436986:1
position: 436986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:442480-442613:1:exon

position:442480:1
position: 442480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105895424
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105895424
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deleted in malignant brain tumors 1 protein-like
translation: MVTSSVIGGSGDALGLGGAGRAQLFEVRVAFSAEPQTQSFCCGEMKMEGCLWVILLSSVVLANQEDAVRLVNGGSRCSGRVEVNHQGEWGTVCDHLWDMTDAAVVCRELGCGDAVKAPVRAHFGQGSGRIWMTGVDCKGSESTLKHCGHYGWAFQGCDHHLDAGVICSDRVSRLSNGSKSCSGRVELFHKTTWASVCGAAFDWQDAEVVCRELDCGAPVEVLGTAAFGEGKGQVWSEEIQCGGNETQIQLCPTSALNINCSHENDVGLTCRDDLRLVNGSSRCSGRVEVYHAGEWGSVCGNGWDLLDAAVVCRELDCGDAIEALKGAYFGPGSGSIWMSDVQCLGSESTVKDCWSQRWVTKNCGHHQDAGVICSGVKLVGRSHCSGRVELLHTETKHTVCDAAFDWQDAKVVCRELDCGAPVEVLGAAAFGEGKKQMWSEEIQCGGNETQIQLCPTSALNVNSFTELMNCSKWILKLVKHFHNFHFKVPVLMLLQCCLKLTPQAGQ
SIO_010081: LOC105895424
subclass of: SO_0000673
so part of: LOC105895424
location: join(413088..413283,413539..413847,435807..436115,436210..436518,436723..436986,442480..442613)
location: region:413088-442613:1
so has part: feature:413088-413283:1:exon
so has part: feature:413539-413847:1:exon
so has part: feature:435807-436115:1:exon
so has part: feature:436210-436518:1:exon
so has part: feature:436723-436986:1:exon
so has part: feature:442480-442613:1:exon

XP_042559586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:413088-413283:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413539-413847:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435807-436115:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:436210-436518:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436723-436986:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:442480-442613:1:exon

LOC105909990
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105909990
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 455224..457583
location: region:455224-457583:1
so has part: feature:455224-457583:1:exon
subclass of: SO_0000011

105909990
type: Gene
SIO_000068: ncbigene

position:455224:1
position: 455224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457583:1
position: 457583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455224-457583:1:exon

LOC105909990
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7950
nc RNA class: lncRNA
gene: LOC105909990
product: uncharacterized LOC105909990
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006151599.1
SIO_010081: LOC105909990
subclass of: SO_0000673
so part of: LOC105909990
location: join(455224..455334,456077..456244,456803..457583)
location: region:455224-457583:1
so has part: feature:455224-455334:1:exon
so has part: feature:456077-456244:1:exon
so has part: feature:456803-457583:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:455224-455334:1:exon

position:455334:1
position: 455334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:456077-456244:1:exon

position:456077:1
position: 456077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456244:1
position: 456244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:456803-457583:1:exon

position:456803:1
position: 456803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105908845
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105908845
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(478838..497330)
location: region:478838-497330:-1
so has part: feature:478838-497330:-1:exon
subclass of: SO_0000010

105908845
type: Gene
SIO_000068: ncbigene

position:478838:-1
position: 478838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497330:-1
position: 497330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478838-497330:-1:exon

LOC105908845
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105908845
product: synaptogyrin-1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_012837405.3
SIO_010081: LOC105908845
subclass of: SO_0000673
so part of: LOC105908845
location: complement(join(478838..481234,483130..483275,485768..486005,496542..497330))
location: region:478838-497330:-1
so has part: feature:496542-497330:-1:exon
so has part: feature:485768-486005:-1:exon
so has part: feature:483130-483275:-1:exon
so has part: feature:478838-481234:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:496542-497330:-1:exon

position:496542:-1
position: 496542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:485768-486005:-1:exon

position:485768:-1
position: 485768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486005:-1
position: 486005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:483130-483275:-1:exon

position:483130:-1
position: 483130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483275:-1
position: 483275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:478838-481234:-1:exon

position:481234:-1
position: 481234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105908845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105908845
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptogyrin-1 isoform X1
translation: MEGMAYGAGKAGGAFDPITFVQQPHTILRIVSWLFAIVIFGSIANEGYVNRPDEAEEYCIFNRNQNACNYAVGMGTMAFLCCLGFLALDVYFPQISSVKDRKKAVLADVGVSAFWAFMWFVGFCLLANQWQVSKHEDNPLREGGDAARAAITFSFFSIFTWAALSFLAYKRYLLGADSALFSTEYTDPSQDVAAAPYSAFSAGDGDLGSPGGGGGSGSYQQTNATDAFDGSAGYQRQDY
SIO_010081: LOC105908845
subclass of: SO_0000673
so part of: LOC105908845
location: complement(join(480998..481234,483130..483275,485768..486005,496542..496640))
location: region:480998-496640:-1
so has part: feature:496542-496640:-1:exon
so has part: feature:485768-486005:-1:exon
so has part: feature:483130-483275:-1:exon
so has part: feature:480998-481234:-1:exon

XP_012692859.2
type: Protein
SIO_000068: ncbiprotein

position:480998:-1
position: 480998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496640:-1
position: 496640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496542-496640:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:485768-486005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483130-483275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480998-481234:-1:exon

LOC105908845
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105908845
product: synaptogyrin-1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031562125.2
SIO_010081: LOC105908845
subclass of: SO_0000673
so part of: LOC105908845
location: complement(join(482401..482642,483130..483275,485768..486005,496542..497330))
location: region:482401-497330:-1
so has part: feature:496542-497330:-1:exon
so has part: feature:485768-486005:-1:exon
so has part: feature:483130-483275:-1:exon
so has part: feature:482401-482642:-1:exon

position:482401:-1
position: 482401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496542-497330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:485768-486005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483130-483275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:482401-482642:-1:exon

position:482642:-1
position: 482642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105908845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105908845
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptogyrin-1 isoform X2
translation: MEGMAYGAGKAGGAFDPITFVQQPHTILRIVSWLFAIVIFGSIANEGYVNRPDEAEEYCIFNRNQNACNYAVGMGTMAFLCCLGFLALDVYFPQISSVKDRKKAVLADVGVSAFWAFMWFVGFCLLANQWQVSKHEDNPLREGGDAARAAITFSFFSIFTWGGLMLMALEKLRTVSFEEEYNKLFTPQPPPPII
SIO_010081: LOC105908845
subclass of: SO_0000673
so part of: LOC105908845
location: complement(join(482541..482642,483130..483275,485768..486005,496542..496640))
location: region:482541-496640:-1
so has part: feature:496542-496640:-1:exon
so has part: feature:485768-486005:-1:exon
so has part: feature:483130-483275:-1:exon
so has part: feature:482541-482642:-1:exon

XP_031417985.1
type: Protein
SIO_000068: ncbiprotein

position:482541:-1
position: 482541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496542-496640:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:485768-486005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483130-483275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:482541-482642:-1:exon

ift27
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: ift27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 497642..505122
location: region:497642-505122:1
so has part: feature:497642-505122:1:exon
subclass of: SO_0000010

105908847
type: Gene
SIO_000068: ncbigene

position:497642:1
position: 497642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505122:1
position: 505122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497642-505122:1:exon

ift27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: ift27
product: intraflagellar transport 27 homolog (Chlamydomonas)
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_012837406.3
SIO_010081: ift27
subclass of: SO_0000673
so part of: ift27
location: join(497642..497893,498356..498435,501445..501504,502012..502071,502376..502493,503958..504067,504794..505122)
location: region:497642-505122:1
so has part: feature:497642-497893:1:exon
so has part: feature:498356-498435:1:exon
so has part: feature:501445-501504:1:exon
so has part: feature:502012-502071:1:exon
so has part: feature:502376-502493:1:exon
so has part: feature:503958-504067:1:exon
so has part: feature:504794-505122:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:497642-497893:1:exon

position:497893:1
position: 497893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:498356-498435:1:exon

position:498356:1
position: 498356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498435:1
position: 498435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:501445-501504:1:exon

position:501445:1
position: 501445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501504:1
position: 501504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:502012-502071:1:exon

position:502012:1
position: 502012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502071:1
position: 502071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:502376-502493:1:exon

position:502376:1
position: 502376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502493:1
position: 502493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:503958-504067:1:exon

position:503958:1
position: 503958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504067:1
position: 504067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:504794-505122:1:exon

position:504794:1
position: 504794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ift27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: ift27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 27 homolog
translation: MVKLRARCILVGDAAVGKSALSQMFRSDGAHFQKIYSMTAGVELLTKSVNVPNTSDSVELYIFDSPGREIFAEASEKMWGQPSVMCLVFDISSEASFSSCGRWLERVRAHCQGLQVPGVLVGNKSDLSSRREVETATAQEWAQSQGMEYFETSAKEMESCDAPFICLAQAFHTLYQDRLNTIQSIVSP
SIO_010081: ift27
subclass of: SO_0000673
so part of: ift27
location: join(497860..497893,498356..498435,501445..501504,502012..502071,502376..502493,503958..504067,504794..504898)
location: region:497860-504898:1
so has part: feature:497860-497893:1:exon
so has part: feature:498356-498435:1:exon
so has part: feature:501445-501504:1:exon
so has part: feature:502012-502071:1:exon
so has part: feature:502376-502493:1:exon
so has part: feature:503958-504067:1:exon
so has part: feature:504794-504898:1:exon

XP_012692860.2
type: Protein
SIO_000068: ncbiprotein

position:497860:1
position: 497860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504898:1
position: 504898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497860-497893:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:498356-498435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501445-501504:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502012-502071:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:502376-502493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:503958-504067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:504794-504898:1:exon

LOC105908858
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105908858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(510716..573012)
location: region:510716-573012:-1
so has part: feature:510716-573012:-1:exon
subclass of: SO_0000010

105908858
type: Gene
SIO_000068: ncbigene

position:510716:-1
position: 510716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573012:-1
position: 573012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510716-573012:-1:exon

LOC105908858
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105908858
product: voltage-dependent calcium channel gamma-2 subunit
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_031562335.2
SIO_010081: LOC105908858
subclass of: SO_0000673
so part of: LOC105908858
location: complement(join(510716..512130,514053..514193,528674..528757,570858..573012))
location: region:510716-573012:-1
so has part: feature:570858-573012:-1:exon
so has part: feature:528674-528757:-1:exon
so has part: feature:514053-514193:-1:exon
so has part: feature:510716-512130:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:570858-573012:-1:exon

position:570858:-1
position: 570858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:528674-528757:-1:exon

position:528674:-1
position: 528674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528757:-1
position: 528757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:514053-514193:-1:exon

position:514053:-1
position: 514053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514193:-1
position: 514193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:510716-512130:-1:exon

position:512130:-1
position: 512130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105908858
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105908858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel gamma-2 subunit
translation: MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRGVCKVKSNNENETSKKNEEVMTHSGLWRTCCLEGNFKGLCKQIDHFPEDTDYTADAAEYFLRAVRASSIFPILSVIMLFMAGLCIAASEFYKSRHNIILSAGIFFVSAGLSNIIGIIVYISANAGDPSKSDSKKNSYSYGWSFYFGALSFIMAEMVGVLAVHMFIDRHREVRAAEARSQGAAARGRRPGPGGGSGGGADYLQGSAITRIPSYRYRYRRRSSSRSTDPSHSRDNSPVGLKGFGALPSTEINMYTMSRGGGGGGGGGNGGGGGGDTLKTSHGTPTTTYNSERDHNFLQVHNCIPKDLKDSGHGNAANRRTTPV
SIO_010081: LOC105908858
subclass of: SO_0000673
so part of: LOC105908858
location: complement(join(511490..512130,514053..514193,528674..528757,570858..571068))
location: region:511490-571068:-1
so has part: feature:570858-571068:-1:exon
so has part: feature:528674-528757:-1:exon
so has part: feature:514053-514193:-1:exon
so has part: feature:511490-512130:-1:exon

XP_031418195.1
type: Protein
SIO_000068: ncbiprotein

position:511490:-1
position: 511490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571068:-1
position: 571068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570858-571068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528674-528757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:514053-514193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:511490-512130:-1:exon

eif3d
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: eif3d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(586002..593685)
location: region:586002-593685:-1
so has part: feature:586002-593685:-1:exon
subclass of: SO_0000010

105908859
type: Gene
SIO_000068: ncbigene

position:586002:-1
position: 586002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593685:-1
position: 593685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586002-593685:-1:exon

eif3d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: eif3d
product: eukaryotic translation initiation factor 3, subunit D
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_012837419.3
SIO_010081: eif3d
subclass of: SO_0000673
so part of: eif3d
location: complement(join(586002..586155,586695..586788,587574..587766,588134..588276,588605..588734,588930..589015,589333..589463,589714..589861,590048..590180,590777..590892,591229..591301,591432..591517,591762..591898,592008..592053,592647..592772,593593..593685))
location: region:586002-593685:-1
so has part: feature:593593-593685:-1:exon
so has part: feature:592647-592772:-1:exon
so has part: feature:592008-592053:-1:exon
so has part: feature:591762-591898:-1:exon
so has part: feature:591432-591517:-1:exon
so has part: feature:591229-591301:-1:exon
so has part: feature:590777-590892:-1:exon
so has part: feature:590048-590180:-1:exon
so has part: feature:589714-589861:-1:exon
so has part: feature:589333-589463:-1:exon
so has part: feature:588930-589015:-1:exon
so has part: feature:588605-588734:-1:exon
so has part: feature:588134-588276:-1:exon
so has part: feature:587574-587766:-1:exon
so has part: feature:586695-586788:-1:exon
so has part: feature:586002-586155:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:593593-593685:-1:exon

position:593593:-1
position: 593593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:592647-592772:-1:exon

position:592647:-1
position: 592647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592772:-1
position: 592772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:592008-592053:-1:exon

position:592008:-1
position: 592008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592053:-1
position: 592053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:591762-591898:-1:exon

position:591762:-1
position: 591762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591898:-1
position: 591898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:591432-591517:-1:exon

position:591432:-1
position: 591432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591517:-1
position: 591517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:591229-591301:-1:exon

position:591229:-1
position: 591229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591301:-1
position: 591301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:590777-590892:-1:exon

position:590777:-1
position: 590777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590892:-1
position: 590892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:590048-590180:-1:exon

position:590048:-1
position: 590048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590180:-1
position: 590180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:589714-589861:-1:exon

position:589714:-1
position: 589714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589861:-1
position: 589861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:589333-589463:-1:exon

position:589333:-1
position: 589333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589463:-1
position: 589463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:588930-589015:-1:exon

position:588930:-1
position: 588930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589015:-1
position: 589015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:588605-588734:-1:exon

position:588605:-1
position: 588605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588734:-1
position: 588734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:588134-588276:-1:exon

position:588134:-1
position: 588134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588276:-1
position: 588276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:587574-587766:-1:exon

position:587574:-1
position: 587574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587766:-1
position: 587766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:586695-586788:-1:exon

position:586695:-1
position: 586695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586788:-1
position: 586788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:586002-586155:-1:exon

position:586155:-1
position: 586155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

eif3d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: eif3d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 3 subunit D
translation: MAKFLAPVIQDNPSGWGPCAVPDKFKDMPYQPFSKGDRLGKVADWTGATYQDKRYTNKYSSQFGGGSQYAYFHEEDEASFQLVDTAKTQKTAYQRNRLRFAQRNLRRDKDRRNVAQFNMQTLPKSAKQKERDRMRLQKKFQKQFGVRQKWDQKSQLKPRDSSVEVRSDWEVKEEMDFPRLMKMRYMEVEDPTDIECCGALEYYDKAFDRVTTRNEKQLKSIKRIFHTVTTTDDPVIRKLAKTQGNVFATDAILATLMCCTRSVNSWDIIVQRVGNKLFFDKRDNSDFDLLTVSETANEPPQDEGNSFNSPRNLAMEATYINHNFSQQCLKMGGERYKFPNSNPFVEEDADKNEVASVAYRYRRWKLGEDIDLIVRCEHDGVMTGASGEVSFINMKTLNEWDSRHCNGVDWRQKLDSQRGAVLATELKNNSYKLARWTCCAMLAGSEYLKLGYVSRYHVKDSARHVILGTQQFKPNEFASQINLSMENAWGILRCVIDICRKLDEGKYLILKDPNKQVIRIYSLPDGTFSSDEDEDEEEDEEDDEEEDEEPL
SIO_010081: eif3d
subclass of: SO_0000673
so part of: eif3d
location: complement(join(586139..586155,586695..586788,587574..587766,588134..588276,588605..588734,588930..589015,589333..589463,589714..589861,590048..590180,590777..590892,591229..591301,591432..591517,591762..591898,592008..592053,592647..592769))
location: region:586139-592769:-1
so has part: feature:592647-592769:-1:exon
so has part: feature:592008-592053:-1:exon
so has part: feature:591762-591898:-1:exon
so has part: feature:591432-591517:-1:exon
so has part: feature:591229-591301:-1:exon
so has part: feature:590777-590892:-1:exon
so has part: feature:590048-590180:-1:exon
so has part: feature:589714-589861:-1:exon
so has part: feature:589333-589463:-1:exon
so has part: feature:588930-589015:-1:exon
so has part: feature:588605-588734:-1:exon
so has part: feature:588134-588276:-1:exon
so has part: feature:587574-587766:-1:exon
so has part: feature:586695-586788:-1:exon
so has part: feature:586139-586155:-1:exon

XP_012692873.1
type: Protein
SIO_000068: ncbiprotein

position:586139:-1
position: 586139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592769:-1
position: 592769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592647-592769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:592008-592053:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:591762-591898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:591432-591517:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:591229-591301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:590777-590892:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:590048-590180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:589714-589861:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:589333-589463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:588930-589015:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:588605-588734:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:588134-588276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:587574-587766:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:586695-586788:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:586139-586155:-1:exon

LOC105908860
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105908860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 593754..598637
location: region:593754-598637:1
so has part: feature:593754-598637:1:exon
subclass of: SO_0000010

105908860
type: Gene
SIO_000068: ncbigene

position:593754:1
position: 593754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598637:1
position: 598637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593754-598637:1:exon

LOC105908860
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105908860
product: protein CutA homolog, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_031561899.1
SIO_010081: LOC105908860
subclass of: SO_0000673
so part of: LOC105908860
location: join(593754..593948,594267..594346,596527..596675,596895..596954,597758..597803,598134..598183,598312..598637)
location: region:593754-598637:1
so has part: feature:593754-593948:1:exon
so has part: feature:594267-594346:1:exon
so has part: feature:596527-596675:1:exon
so has part: feature:596895-596954:1:exon
so has part: feature:597758-597803:1:exon
so has part: feature:598134-598183:1:exon
so has part: feature:598312-598637:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:593754-593948:1:exon

position:593948:1
position: 593948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:594267-594346:1:exon

position:594267:1
position: 594267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594346:1
position: 594346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:596527-596675:1:exon

position:596527:1
position: 596527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596675:1
position: 596675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:596895-596954:1:exon

position:596895:1
position: 596895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596954:1
position: 596954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:597758-597803:1:exon

position:597758:1
position: 597758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597803:1
position: 597803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:598134-598183:1:exon

position:598134:1
position: 598134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598183:1
position: 598183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:598312-598637:1:exon

position:598312:1
position: 598312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105908860
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105908860
product: protein CutA homolog, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_012837421.2
SIO_010081: LOC105908860
subclass of: SO_0000673
so part of: LOC105908860
location: join(593754..593948,596527..596675,596895..596954,597758..597803,598134..598183,598312..598637)
location: region:593754-598637:1
so has part: feature:593754-593948:1:exon
so has part: feature:596527-596675:1:exon
so has part: feature:596895-596954:1:exon
so has part: feature:597758-597803:1:exon
so has part: feature:598134-598183:1:exon
so has part: feature:598312-598637:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:593754-593948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596527-596675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596895-596954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:597758-597803:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:598134-598183:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598312-598637:1:exon

LOC105908860
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105908860
product: protein CutA homolog, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_031561900.1
SIO_010081: LOC105908860
subclass of: SO_0000673
so part of: LOC105908860
location: join(593754..593948,596531..596675,596895..596954,597758..597803,598134..598183,598312..598637)
location: region:593754-598637:1
so has part: feature:593754-593948:1:exon
so has part: feature:596531-596675:1:exon
so has part: feature:596895-596954:1:exon
so has part: feature:597758-597803:1:exon
so has part: feature:598134-598183:1:exon
so has part: feature:598312-598637:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:593754-593948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596531-596675:1:exon

position:596531:1
position: 596531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:596895-596954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:597758-597803:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:598134-598183:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598312-598637:1:exon

LOC105908860
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105908860
product: protein CutA homolog, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_012837420.3
SIO_010081: LOC105908860
subclass of: SO_0000673
so part of: LOC105908860
location: join(594210..594346,596527..596675,596895..596954,597758..597803,598134..598183,598312..598637)
location: region:594210-598637:1
so has part: feature:594210-594346:1:exon
so has part: feature:596527-596675:1:exon
so has part: feature:596895-596954:1:exon
so has part: feature:597758-597803:1:exon
so has part: feature:598134-598183:1:exon
so has part: feature:598312-598637:1:exon

position:594210:1
position: 594210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594210-594346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596527-596675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596895-596954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:597758-597803:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:598134-598183:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598312-598637:1:exon

LOC105908860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105908860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CutA homolog isoform X1
translation: MRFGLADGLQSGTLKAVVVTVLLSGLMLPVLRTVGLRAFSMASETYSSGTHSAAFVTCPNDTVAKELARGIVEKKLAACVNIVPKITSVYEWQGKIQEDSEVLLMIKTRTSKVTELAEYVRSNHPYEVAEVISLPIDQGNPPYLKWIGEVVPE
SIO_010081: LOC105908860
subclass of: SO_0000673
so part of: LOC105908860
location: join(594290..594346,596527..596675,596895..596954,597758..597803,598134..598183,598312..598411)
location: region:594290-598411:1
so has part: feature:594290-594346:1:exon
so has part: feature:596527-596675:1:exon
so has part: feature:596895-596954:1:exon
so has part: feature:597758-597803:1:exon
so has part: feature:598134-598183:1:exon
so has part: feature:598312-598411:1:exon

XP_031417759.1
type: Protein
SIO_000068: ncbiprotein

position:594290:1
position: 594290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598411:1
position: 598411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594290-594346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596527-596675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596895-596954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:597758-597803:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:598134-598183:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598312-598411:1:exon

LOC105908860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105908860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CutA homolog isoform X1
translation: MRFGLADGLQSGTLKAVVVTVLLSGLMLPVLRTVGLRAFSMASETYSSGTHSAAFVTCPNDTVAKELARGIVEKKLAACVNIVPKITSVYEWQGKIQEDSEVLLMIKTRTSKVTELAEYVRSNHPYEVAEVISLPIDQGNPPYLKWIGEVVPE
SIO_010081: LOC105908860
subclass of: SO_0000673
so part of: LOC105908860
location: join(594290..594346,596527..596675,596895..596954,597758..597803,598134..598183,598312..598411)
location: region:594290-598411:1
so has part: feature:594290-594346:1:exon
so has part: feature:596527-596675:1:exon
so has part: feature:596895-596954:1:exon
so has part: feature:597758-597803:1:exon
so has part: feature:598134-598183:1:exon
so has part: feature:598312-598411:1:exon

XP_012692874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:594290-594346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596527-596675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596895-596954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:597758-597803:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:598134-598183:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598312-598411:1:exon

LOC105908860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105908860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CutA homolog isoform X2
translation: MLPVLRTVGLRAFSMASETYSSGTHSAAFVTCPNDTVAKELARGIVEKKLAACVNIVPKITSVYEWQGKIQEDSEVLLMIKTRTSKVTELAEYVRSNHPYEVAEVISLPIDQGNPPYLKWIGEVVPE
SIO_010081: LOC105908860
subclass of: SO_0000673
so part of: LOC105908860
location: join(596548..596675,596895..596954,597758..597803,598134..598183,598312..598411)
location: region:596548-598411:1
so has part: feature:596548-596675:1:exon
so has part: feature:596895-596954:1:exon
so has part: feature:597758-597803:1:exon
so has part: feature:598134-598183:1:exon
so has part: feature:598312-598411:1:exon

XP_031417760.1
type: Protein
SIO_000068: ncbiprotein

position:596548:1
position: 596548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596548-596675:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596895-596954:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:597758-597803:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:598134-598183:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:598312-598411:1:exon

LOC105908860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105908860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CutA homolog isoform X2
translation: MLPVLRTVGLRAFSMASETYSSGTHSAAFVTCPNDTVAKELARGIVEKKLAACVNIVPKITSVYEWQGKIQEDSEVLLMIKTRTSKVTELAEYVRSNHPYEVAEVISLPIDQGNPPYLKWIGEVVPE
SIO_010081: LOC105908860
subclass of: SO_0000673
so part of: LOC105908860
location: join(596548..596675,596895..596954,597758..597803,598134..598183,598312..598411)
location: region:596548-598411:1
so has part: feature:596548-596675:1:exon
so has part: feature:596895-596954:1:exon
so has part: feature:597758-597803:1:exon
so has part: feature:598134-598183:1:exon
so has part: feature:598312-598411:1:exon

XP_012692875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:596548-596675:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596895-596954:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:597758-597803:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:598134-598183:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:598312-598411:1:exon

LOC105908848
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105908848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(601770..604993)
location: region:601770-604993:-1
so has part: feature:601770-604993:-1:exon
subclass of: SO_0000010

105908848
type: Gene
SIO_000068: ncbigene

position:601770:-1
position: 601770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604993:-1
position: 604993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601770-604993:-1:exon

LOC105908848
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105908848
product: somatostatin receptor type 5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_031562652.2
SIO_010081: LOC105908848
subclass of: SO_0000673
so part of: LOC105908848
location: complement(join(601770..603056,604250..604993))
location: region:601770-604993:-1
so has part: feature:604250-604993:-1:exon
so has part: feature:601770-603056:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:604250-604993:-1:exon

position:604250:-1
position: 604250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:601770-603056:-1:exon

position:603056:-1
position: 603056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105908848
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105908848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: somatostatin receptor type 5
translation: MHLDAATSLSLMPPSTLWENASFHLGDDAHLLLNDSSGQNWTLAGGGDDFRGGFVPSVAGVLIPLIYVAVCVVGLGGNTLVIHIVLHYLRTESVTNIYILNLAIADELFMLGLPFLAVQNALLSWPFGSLMCRLVMTVDAINQFTSIFCLTVMSIDRYLAVVHPLRSARWRQPRVAKAVNATVWAVSMVTVLPVVVFADVLRDDGNCSIVWPEPAEVWKASFIIYTSTLGFFGPLLVICMCYLLIVVKVRKAGRKARAVSVRRRKSERKITRMVVVVVAVFVLCWLPFYILNIVNLLVLLPGEFRGLYYFVVVLSYANSCANPILYGFLSDNFKRGFRKALCRSSRRVENLRGARGGGGGQMGEQQKHPGGKARGDGHLPAEQGATREQDIQGSLRAIVNPEEKKEDEEEEEEEEEEEEEEEEEEGEGEQEGVTQEKDTVQMVDICKITQNGNRNGVGEGSRGPLQQNGKLEVGFGQGTSNGGSPGPGSTVVIPLVVNGARSGNVRPLTDVSVEHSSVLEISYL
SIO_010081: LOC105908848
subclass of: SO_0000673
so part of: LOC105908848
location: complement(join(602226..603056,604250..604993))
location: region:602226-604993:-1
so has part: feature:604250-604993:-1:exon
so has part: feature:602226-603056:-1:exon

XP_031418512.1
type: Protein
SIO_000068: ncbiprotein

position:602226:-1
position: 602226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604250-604993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602226-603056:-1:exon

cyth4b
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: cyth4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 635844..650443
location: region:635844-650443:1
so has part: feature:635844-650443:1:exon
subclass of: SO_0000010

105908857
type: Gene
SIO_000068: ncbigene

position:635844:1
position: 635844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650443:1
position: 650443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635844-650443:1:exon

cyth4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: cyth4b
product: cytohesin 4b
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_012837417.3
SIO_010081: cyth4b
subclass of: SO_0000673
so part of: cyth4b
location: join(635844..636219,639205..639287,639790..639854,640200..640266,642159..642277,642820..642900,643872..643984,644362..644510,645125..645236,645479..645555,646219..646290,646706..646860,649248..650443)
location: region:635844-650443:1
so has part: feature:635844-636219:1:exon
so has part: feature:639205-639287:1:exon
so has part: feature:639790-639854:1:exon
so has part: feature:640200-640266:1:exon
so has part: feature:642159-642277:1:exon
so has part: feature:642820-642900:1:exon
so has part: feature:643872-643984:1:exon
so has part: feature:644362-644510:1:exon
so has part: feature:645125-645236:1:exon
so has part: feature:645479-645555:1:exon
so has part: feature:646219-646290:1:exon
so has part: feature:646706-646860:1:exon
so has part: feature:649248-650443:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:635844-636219:1:exon

position:636219:1
position: 636219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:639205-639287:1:exon

position:639205:1
position: 639205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639287:1
position: 639287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:639790-639854:1:exon

position:639790:1
position: 639790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639854:1
position: 639854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:640200-640266:1:exon

position:640200:1
position: 640200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640266:1
position: 640266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:642159-642277:1:exon

position:642159:1
position: 642159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642277:1
position: 642277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:642820-642900:1:exon

position:642820:1
position: 642820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642900:1
position: 642900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:643872-643984:1:exon

position:643872:1
position: 643872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643984:1
position: 643984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:644362-644510:1:exon

position:644362:1
position: 644362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644510:1
position: 644510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:645125-645236:1:exon

position:645125:1
position: 645125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645236:1
position: 645236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:645479-645555:1:exon

position:645479:1
position: 645479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645555:1
position: 645555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:646219-646290:1:exon

position:646219:1
position: 646219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646290:1
position: 646290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:646706-646860:1:exon

position:646706:1
position: 646706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646860:1
position: 646860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:649248-650443:1:exon

position:649248:1
position: 649248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cyth4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: cyth4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytohesin 4b
translation: MTECCHPVAMDFTAAEKQELEHIKVHKQDLLDDIQKLKMAIENVMAGIQDFESTEESKLIERGKQLSRGKKKFNMDPKKGVNYLVENKLLEKTPQRLAEFLYKEDGLNKTAIGDFLGEREELHLQTLKAFVELHEFSDLNLVQALRQFLWSFRLPGEAQKIDRMMETFATRYCDCNAAVFQSTDTCYILSFAIIMLNTSLHNPNVKEKTTLERFFSMNRGINNGEDLPNELLTKLYDSIRNEPFKIPEDDGNDLTHTFFNPDREGWLLKIGGRVKTWKRRWFILTDNCLYYFEHTTDKEPRGIIPLENLCVKEVACPRKPYCLELFHPNSKGQKIKACKTETDGRVVEGKHQSYMISAGTAEERDDWIESIRASITKDPFYDLVSVRKRKVINQAAQD
SIO_010081: cyth4b
subclass of: SO_0000673
so part of: cyth4b
location: join(636198..636219,639205..639287,639790..639854,640200..640266,642159..642277,642820..642900,643872..643984,644362..644510,645125..645236,645479..645555,646219..646290,646706..646860,649248..649329)
location: region:636198-649329:1
so has part: feature:636198-636219:1:exon
so has part: feature:639205-639287:1:exon
so has part: feature:639790-639854:1:exon
so has part: feature:640200-640266:1:exon
so has part: feature:642159-642277:1:exon
so has part: feature:642820-642900:1:exon
so has part: feature:643872-643984:1:exon
so has part: feature:644362-644510:1:exon
so has part: feature:645125-645236:1:exon
so has part: feature:645479-645555:1:exon
so has part: feature:646219-646290:1:exon
so has part: feature:646706-646860:1:exon
so has part: feature:649248-649329:1:exon

XP_012692871.1
type: Protein
SIO_000068: ncbiprotein

position:636198:1
position: 636198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649329:1
position: 649329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636198-636219:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639205-639287:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639790-639854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:640200-640266:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:642159-642277:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642820-642900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:643872-643984:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:644362-644510:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:645125-645236:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:645479-645555:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:646219-646290:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:646706-646860:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:649248-649329:1:exon

LOC105908849
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105908849
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(652287..663545)
location: region:652287-663545:-1
so has part: feature:652287-663545:-1:exon
subclass of: SO_0000010

105908849
type: Gene
SIO_000068: ncbigene

position:652287:-1
position: 652287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663545:-1
position: 663545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652287-663545:-1:exon

LOC105908849
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105908849
product: protein FAM83F-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031562202.2
SIO_010081: LOC105908849
subclass of: SO_0000673
so part of: LOC105908849
location: complement(join(652287..652943,653112..653845,654710..654831,655430..655597,662762..663545))
location: region:652287-663545:-1
so has part: feature:662762-663545:-1:exon
so has part: feature:655430-655597:-1:exon
so has part: feature:654710-654831:-1:exon
so has part: feature:653112-653845:-1:exon
so has part: feature:652287-652943:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662762-663545:-1:exon

position:662762:-1
position: 662762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:655430-655597:-1:exon

position:655430:-1
position: 655430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655597:-1
position: 655597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:654710-654831:-1:exon

position:654710:-1
position: 654710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654831:-1
position: 654831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:653112-653845:-1:exon

position:653112:-1
position: 653112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653845:-1
position: 653845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:652287-652943:-1:exon

position:652943:-1
position: 652943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105908849
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105908849
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM83F-like
translation: MADSQLECMDDGHINEKIPESRPEFMYSEEQRVALELLLKEGDGAFKTQLKTDNTKDFLSAREIKWIRDTVKEYQTNEEDDSTSSATTESKKIEGSTSSLHSTYWPQLSDTEVPPLDLGWPSGGFFKGVTRVAVHTSPPKQNAPHIKEVVRRLIQEANKVLAIVMDLLTDLHILQDLLDAAAKRGVAVYIILDIRGAPHFLDMCNRLQVGSQHLRHIRVRTVSGTGFQLSFGTIPGTLGSKYMLVDGDKVMFGSYSFSWSSFRMDRNMMTILSGQVVDFFDNDFRELYAVSEKLDLYKEFHISRPAVPTAPVRVASVESKRPPLPATTSRFQVSLGDSKGAGGDLKVPAHKYYNPKYQLAFGSPPGLPTSLQDVHTERGPSTAGLGGPTLTPEQTQSRASSERLDKLAPLPAQTGGAKKSRTSLRNFFRSKQNSQKVQNKDEAVVTTPSSSPTSKTANGTADSSFEDLPEPVAPKGKNRRLSKLGLKSQSLMTLNTGEENGSKSRKKSQKCIQS
SIO_010081: LOC105908849
subclass of: SO_0000673
so part of: LOC105908849
location: complement(join(652900..652943,653112..653845,654710..654831,655430..655597,662762..663238))
location: region:652900-663238:-1
so has part: feature:662762-663238:-1:exon
so has part: feature:655430-655597:-1:exon
so has part: feature:654710-654831:-1:exon
so has part: feature:653112-653845:-1:exon
so has part: feature:652900-652943:-1:exon

XP_031418062.1
type: Protein
SIO_000068: ncbiprotein

position:652900:-1
position: 652900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663238:-1
position: 663238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662762-663238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:655430-655597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654710-654831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:653112-653845:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:652900-652943:-1:exon

grap2b
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: grap2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(663621..673602)
location: region:663621-673602:-1
so has part: feature:663621-673602:-1:exon
subclass of: SO_0000010

105908850
type: Gene
SIO_000068: ncbigene

position:663621:-1
position: 663621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673602:-1
position: 673602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663621-673602:-1:exon

grap2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: grap2b
product: GRB2 related adaptor protein 2b, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042703538.1
SIO_010081: grap2b
subclass of: SO_0000673
so part of: grap2b
location: complement(join(663621..664008,664373..664447,664682..664717,665129..665167,665405..665449,666165..666327,669433..669552,670128..670219,670707..670819,673077..673172,673267..673602))
location: region:663621-673602:-1
so has part: feature:673267-673602:-1:exon
so has part: feature:673077-673172:-1:exon
so has part: feature:670707-670819:-1:exon
so has part: feature:670128-670219:-1:exon
so has part: feature:669433-669552:-1:exon
so has part: feature:666165-666327:-1:exon
so has part: feature:665405-665449:-1:exon
so has part: feature:665129-665167:-1:exon
so has part: feature:664682-664717:-1:exon
so has part: feature:664373-664447:-1:exon
so has part: feature:663621-664008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673267-673602:-1:exon

position:673267:-1
position: 673267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:673077-673172:-1:exon

position:673077:-1
position: 673077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673172:-1
position: 673172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:670707-670819:-1:exon

position:670707:-1
position: 670707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670819:-1
position: 670819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:670128-670219:-1:exon

position:670128:-1
position: 670128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670219:-1
position: 670219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:669433-669552:-1:exon

position:669433:-1
position: 669433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669552:-1
position: 669552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:666165-666327:-1:exon

position:666165:-1
position: 666165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666327:-1
position: 666327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:665405-665449:-1:exon

position:665405:-1
position: 665405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665449:-1
position: 665449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:665129-665167:-1:exon

position:665129:-1
position: 665129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665167:-1
position: 665167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:664682-664717:-1:exon

position:664682:-1
position: 664682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664717:-1
position: 664717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:664373-664447:-1:exon

position:664373:-1
position: 664373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664447:-1
position: 664447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:663621-664008:-1:exon

position:664008:-1
position: 664008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

grap2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: grap2b
product: GRB2 related adaptor protein 2b, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_031562206.2
SIO_010081: grap2b
subclass of: SO_0000673
so part of: grap2b
location: complement(join(663621..664008,664373..664447,664682..664717,665129..665167,665405..665449,666165..666327,669433..669552,670128..670219,670707..670819,673077..673602))
location: region:663621-673602:-1
so has part: feature:673077-673602:-1:exon
so has part: feature:670707-670819:-1:exon
so has part: feature:670128-670219:-1:exon
so has part: feature:669433-669552:-1:exon
so has part: feature:666165-666327:-1:exon
so has part: feature:665405-665449:-1:exon
so has part: feature:665129-665167:-1:exon
so has part: feature:664682-664717:-1:exon
so has part: feature:664373-664447:-1:exon
so has part: feature:663621-664008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673077-673602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:670707-670819:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:670128-670219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669433-669552:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:666165-666327:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:665405-665449:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:665129-665167:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:664682-664717:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:664373-664447:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:663621-664008:-1:exon

grap2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: grap2b
product: GRB2 related adaptor protein 2b, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_031562205.2
SIO_010081: grap2b
subclass of: SO_0000673
so part of: grap2b
location: complement(join(663621..664008,664373..664447,664682..664717,665129..665167,665405..665449,666165..666327,669433..669552,670128..670219,670707..670819,673073..673172,673267..673599))
location: region:663621-673599:-1
so has part: feature:673267-673599:-1:exon
so has part: feature:673073-673172:-1:exon
so has part: feature:670707-670819:-1:exon
so has part: feature:670128-670219:-1:exon
so has part: feature:669433-669552:-1:exon
so has part: feature:666165-666327:-1:exon
so has part: feature:665405-665449:-1:exon
so has part: feature:665129-665167:-1:exon
so has part: feature:664682-664717:-1:exon
so has part: feature:664373-664447:-1:exon
so has part: feature:663621-664008:-1:exon

position:673599:-1
position: 673599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673267-673599:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:673073-673172:-1:exon

position:673073:-1
position: 673073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:670707-670819:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670128-670219:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669433-669552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:666165-666327:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:665405-665449:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665129-665167:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:664682-664717:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:664373-664447:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:663621-664008:-1:exon

grap2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: grap2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRB2-related adapter protein 2b
translation: MEANGKFDFTATAEDELSFKKGDTLKILGTNDDWFKAEMHGQEGFVPKNYLSIDLPSWFQENTGRHEAQETLLSRPVGSFIIRGSQSSPGDFSISVRHENDVQHFKVMRDSRGQYYLWTERFTSINKMVEYYTKSSISKHSRILLRDTDQQPHGFRGPPEPVPPQQSFRGLPEPVPPQQSFRLPEPSPPQQERGRSTTRSFGALPPRPSEPLPPPQPATLKVKAMYDFSAEEKDELDFGSGDVIEVLDQTDPSWWRGRLRGREGLFPSNYTTPL
SIO_010081: grap2b
subclass of: SO_0000673
so part of: grap2b
location: complement(join(663832..664008,664373..664447,664682..664717,665129..665167,665405..665449,666165..666327,669433..669552,670128..670219,670707..670784))
location: region:663832-670784:-1
so has part: feature:670707-670784:-1:exon
so has part: feature:670128-670219:-1:exon
so has part: feature:669433-669552:-1:exon
so has part: feature:666165-666327:-1:exon
so has part: feature:665405-665449:-1:exon
so has part: feature:665129-665167:-1:exon
so has part: feature:664682-664717:-1:exon
so has part: feature:664373-664447:-1:exon
so has part: feature:663832-664008:-1:exon

XP_031418065.1
type: Protein
SIO_000068: ncbiprotein

position:663832:-1
position: 663832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670784:-1
position: 670784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670707-670784:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:670128-670219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:669433-669552:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666165-666327:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:665405-665449:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:665129-665167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:664682-664717:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:664373-664447:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:663832-664008:-1:exon

grap2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: grap2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRB2-related adapter protein 2b
translation: MEANGKFDFTATAEDELSFKKGDTLKILGTNDDWFKAEMHGQEGFVPKNYLSIDLPSWFQENTGRHEAQETLLSRPVGSFIIRGSQSSPGDFSISVRHENDVQHFKVMRDSRGQYYLWTERFTSINKMVEYYTKSSISKHSRILLRDTDQQPHGFRGPPEPVPPQQSFRGLPEPVPPQQSFRLPEPSPPQQERGRSTTRSFGALPPRPSEPLPPPQPATLKVKAMYDFSAEEKDELDFGSGDVIEVLDQTDPSWWRGRLRGREGLFPSNYTTPL
SIO_010081: grap2b
subclass of: SO_0000673
so part of: grap2b
location: complement(join(663832..664008,664373..664447,664682..664717,665129..665167,665405..665449,666165..666327,669433..669552,670128..670219,670707..670784))
location: region:663832-670784:-1
so has part: feature:670707-670784:-1:exon
so has part: feature:670128-670219:-1:exon
so has part: feature:669433-669552:-1:exon
so has part: feature:666165-666327:-1:exon
so has part: feature:665405-665449:-1:exon
so has part: feature:665129-665167:-1:exon
so has part: feature:664682-664717:-1:exon
so has part: feature:664373-664447:-1:exon
so has part: feature:663832-664008:-1:exon

XP_031418066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:670707-670784:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:670128-670219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:669433-669552:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666165-666327:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:665405-665449:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:665129-665167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:664682-664717:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:664373-664447:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:663832-664008:-1:exon

grap2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: grap2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRB2-related adapter protein 2b
translation: MEANGKFDFTATAEDELSFKKGDTLKILGTNDDWFKAEMHGQEGFVPKNYLSIDLPSWFQENTGRHEAQETLLSRPVGSFIIRGSQSSPGDFSISVRHENDVQHFKVMRDSRGQYYLWTERFTSINKMVEYYTKSSISKHSRILLRDTDQQPHGFRGPPEPVPPQQSFRGLPEPVPPQQSFRLPEPSPPQQERGRSTTRSFGALPPRPSEPLPPPQPATLKVKAMYDFSAEEKDELDFGSGDVIEVLDQTDPSWWRGRLRGREGLFPSNYTTPL
SIO_010081: grap2b
subclass of: SO_0000673
so part of: grap2b
location: complement(join(663832..664008,664373..664447,664682..664717,665129..665167,665405..665449,666165..666327,669433..669552,670128..670219,670707..670784))
location: region:663832-670784:-1
so has part: feature:670707-670784:-1:exon
so has part: feature:670128-670219:-1:exon
so has part: feature:669433-669552:-1:exon
so has part: feature:666165-666327:-1:exon
so has part: feature:665405-665449:-1:exon
so has part: feature:665129-665167:-1:exon
so has part: feature:664682-664717:-1:exon
so has part: feature:664373-664447:-1:exon
so has part: feature:663832-664008:-1:exon

XP_042559472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:670707-670784:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:670128-670219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:669433-669552:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666165-666327:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:665405-665449:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:665129-665167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:664682-664717:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:664373-664447:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:663832-664008:-1:exon

LOC105908852
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105908852
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 784553..854062
location: region:784553-854062:1
so has part: feature:784553-854062:1:exon
subclass of: SO_0000010

105908852
type: Gene
SIO_000068: ncbigene

position:784553:1
position: 784553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854062:1
position: 854062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784553-854062:1:exon

LOC105908852
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105908852
product: voltage-dependent T-type calcium channel subunit alpha-1I-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031562653.2
SIO_010081: LOC105908852
subclass of: SO_0000673
so part of: LOC105908852
location: join(784553..784729,787674..787807,801160..801257,807826..807985,821993..822335,823112..823204,829346..829739,830400..830776,836660..836811,837353..837538,838501..838618,838872..839027,839358..839448,841337..841503,849570..850103,851239..851339,853675..854062)
location: region:784553-854062:1
so has part: feature:784553-784729:1:exon
so has part: feature:787674-787807:1:exon
so has part: feature:801160-801257:1:exon
so has part: feature:807826-807985:1:exon
so has part: feature:821993-822335:1:exon
so has part: feature:823112-823204:1:exon
so has part: feature:829346-829739:1:exon
so has part: feature:830400-830776:1:exon
so has part: feature:836660-836811:1:exon
so has part: feature:837353-837538:1:exon
so has part: feature:838501-838618:1:exon
so has part: feature:838872-839027:1:exon
so has part: feature:839358-839448:1:exon
so has part: feature:841337-841503:1:exon
so has part: feature:849570-850103:1:exon
so has part: feature:851239-851339:1:exon
so has part: feature:853675-854062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:784553-784729:1:exon

position:784729:1
position: 784729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:787674-787807:1:exon

position:787674:1
position: 787674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787807:1
position: 787807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:801160-801257:1:exon

position:801160:1
position: 801160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801257:1
position: 801257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:807826-807985:1:exon

position:807826:1
position: 807826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807985:1
position: 807985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:821993-822335:1:exon

position:821993:1
position: 821993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822335:1
position: 822335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:823112-823204:1:exon

position:823112:1
position: 823112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823204:1
position: 823204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:829346-829739:1:exon

position:829346:1
position: 829346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829739:1
position: 829739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:830400-830776:1:exon

position:830400:1
position: 830400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830776:1
position: 830776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:836660-836811:1:exon

position:836660:1
position: 836660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836811:1
position: 836811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:837353-837538:1:exon

position:837353:1
position: 837353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837538:1
position: 837538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:838501-838618:1:exon

position:838501:1
position: 838501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838618:1
position: 838618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:838872-839027:1:exon

position:838872:1
position: 838872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839027:1
position: 839027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:839358-839448:1:exon

position:839358:1
position: 839358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839448:1
position: 839448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:841337-841503:1:exon

position:841337:1
position: 841337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:841503:1
position: 841503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:849570-850103:1:exon

position:849570:1
position: 849570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850103:1
position: 850103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:851239-851339:1:exon

position:851239:1
position: 851239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851339:1
position: 851339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:853675-854062:1:exon

position:853675:1
position: 853675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105908852
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105908852
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent T-type calcium channel subunit alpha-1I-like
translation: MSLCLPNETSARWIGLNRECSTWFERVSMMVILLNCVTLGMYQPCENIDCSSDRCQILQYFDAFIYIFFAVEMVVKMVALGIFGRRCYLGDTWNRLDFFIVMAGVVEYSLDLQNINLTAIRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYPAENFTLTTGITLPKPYYQLDEDDERPFICSLALDNGIMSCQDVPARREGGRACCLNKNDVLHRQTLGLGPEPLVNGSASGDGLCVNWNQYYTRCRTGHSNPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIIGSFFMINLCLVVIATQFSETKQREHQLMQEQRAQCLSSSTLASMAAEPGDCYEELFQLVCHVLRKARRRTVAFLRRLWECPGGGGGGGKPGAEKTGGTGAAGTGVNEGGRGAEMANVNGGERGRLRQIPMDSHCPHCSKAEHISADNPTDPAVTPTAEACPYCSAALSLIDGAGPGDGSANGDKEAGDAGETDGKGDQSEGEGKVERRTCQGRCRGVWVEVRIKLWGIVESKYFNRGIMIAILINTISMGIEHHEQPEELTNILEICNIVFTSMFALEMMLKLTAFGFFSYLRNAYNIFDGIIVIISVCEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTEAGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPLAALYFVALMTFGNYILFNLLIAILVEGFQAEGDANRSYSDDDRSSSNFDESEKHKDSLQLSDPKICTLTPNGHLEMGSLSAALGVFAAERRSFALGSRKSSIISLGKASLEQRSLSLRHSRRSSIYHHWGRPPLPPPQHILSRRSSWNSLGRQVRGGSLRVRGTSSRPYPSEHESLLAPHPSLPHPSHPHLAHLPPPLLLSRRYPHRRDRRALSLELPQLLLMPASSGSPLSQQYPQQQTHLPLPLKKTSSREKAAGEHQDCNGKAPAGPLAPLLGEVFPQVNSRKGELEEEVDYTLCFRVQKMIEVYRPDWCETRGDWSVYLFSPQNKFRQLCQSIIAHKLFDYVVLAFIFLNCITVALERPKIHQGSLVSPRHRPQTPSTHPGPPQASSPTEAPDTSPNPLHSPWTSYRPLHLLKPQAPPQTHSTHPGPLHLLKPQAPPQTPSTHPGPPTGLFTY
SIO_010081: LOC105908852
subclass of: SO_0000673
so part of: LOC105908852
location: join(784553..784729,787674..787807,801160..801257,807826..807985,821993..822335,823112..823204,829346..829739,830400..830776,836660..836811,837353..837538,838501..838618,838872..839027,839358..839448,841337..841503,849570..850103,851239..851339,853675..854062)
location: region:784553-854062:1
so has part: feature:784553-784729:1:exon
so has part: feature:787674-787807:1:exon
so has part: feature:801160-801257:1:exon
so has part: feature:807826-807985:1:exon
so has part: feature:821993-822335:1:exon
so has part: feature:823112-823204:1:exon
so has part: feature:829346-829739:1:exon
so has part: feature:830400-830776:1:exon
so has part: feature:836660-836811:1:exon
so has part: feature:837353-837538:1:exon
so has part: feature:838501-838618:1:exon
so has part: feature:838872-839027:1:exon
so has part: feature:839358-839448:1:exon
so has part: feature:841337-841503:1:exon
so has part: feature:849570-850103:1:exon
so has part: feature:851239-851339:1:exon
so has part: feature:853675-854062:1:exon

XP_031418513.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:784553-784729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:787674-787807:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:801160-801257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:807826-807985:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:821993-822335:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:823112-823204:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:829346-829739:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830400-830776:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:836660-836811:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:837353-837538:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:838501-838618:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:838872-839027:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:839358-839448:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:841337-841503:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:849570-850103:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:851239-851339:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:853675-854062:1:exon

LOC122128815
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC122128815
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 854412..889020
location: region:854412-889020:1
so has part: feature:854412-889020:1:exon
subclass of: SO_0000010

122128815
type: Gene
SIO_000068: ncbigene

position:854412:1
position: 854412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889020:1
position: 889020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854412-889020:1:exon

LOC122128815
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC122128815
product: voltage-dependent T-type calcium channel subunit alpha-1I-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042703653.1
SIO_010081: LOC122128815
subclass of: SO_0000673
so part of: LOC122128815
location: join(854412..854528,859441..859619,860150..860276,860765..860890,861128..861217,861630..861822,864679..864830,866106..866215,867834..867967,869343..869413,872556..872634,873180..873301,873728..874198,881909..882055,886963..887097,888588..889020)
location: region:854412-889020:1
so has part: feature:854412-854528:1:exon
so has part: feature:859441-859619:1:exon
so has part: feature:860150-860276:1:exon
so has part: feature:860765-860890:1:exon
so has part: feature:861128-861217:1:exon
so has part: feature:861630-861822:1:exon
so has part: feature:864679-864830:1:exon
so has part: feature:866106-866215:1:exon
so has part: feature:867834-867967:1:exon
so has part: feature:869343-869413:1:exon
so has part: feature:872556-872634:1:exon
so has part: feature:873180-873301:1:exon
so has part: feature:873728-874198:1:exon
so has part: feature:881909-882055:1:exon
so has part: feature:886963-887097:1:exon
so has part: feature:888588-889020:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:854412-854528:1:exon

position:854528:1
position: 854528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:859441-859619:1:exon

position:859441:1
position: 859441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859619:1
position: 859619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:860150-860276:1:exon

position:860150:1
position: 860150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860276:1
position: 860276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:860765-860890:1:exon

position:860765:1
position: 860765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860890:1
position: 860890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:861128-861217:1:exon

position:861128:1
position: 861128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861217:1
position: 861217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:861630-861822:1:exon

position:861630:1
position: 861630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861822:1
position: 861822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:864679-864830:1:exon

position:864679:1
position: 864679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864830:1
position: 864830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:866106-866215:1:exon

position:866106:1
position: 866106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866215:1
position: 866215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:867834-867967:1:exon

position:867834:1
position: 867834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867967:1
position: 867967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:869343-869413:1:exon

position:869343:1
position: 869343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869413:1
position: 869413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:872556-872634:1:exon

position:872556:1
position: 872556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872634:1
position: 872634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:873180-873301:1:exon

position:873180:1
position: 873180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873301:1
position: 873301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:873728-874198:1:exon

position:873728:1
position: 873728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874198:1
position: 874198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:881909-882055:1:exon

position:881909:1
position: 881909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882055:1
position: 882055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:886963-887097:1:exon

position:886963:1
position: 886963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887097:1
position: 887097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:888588-889020:1:exon

position:888588:1
position: 888588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122128815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC122128815
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent T-type calcium channel subunit alpha-1I-like
translation: MDINFIYVSLFFLSPQERVFLTVSNYIFTAIFVAEMTVKVVSKGLYLGERAYLRSSWNILDGFLVFVSLVDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYYCVGLDVKNITNKSDCLSANYRWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGIDQQPVMNYSPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQNQEVEEAKRREEKRLRRMERKRRKAQKVPYYANYGHVRLMIHTFCTSHHLDIFITLIICVNVVTMSLEHYSQPQSLETTLKFCNYFFTTTFVIETALKLVSFGVRRFFKVRWNQLDLAIVLLSVMGIILEEIEINASLPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNEEFTCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPAGEYNCNPSLQFISPMYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAMEDAEMDAEIELELAQSGLCCLGGVGAAAGGAGAAAAAGVGGSVGPGVDRGGGGGGRGGVGEMGCRHQGVTAASPHCPHGASSPRLMGHDACSCRRLYSPAQENQWLDSVSLLIKDSLEGEMLMIDNLSGSVFHHYSSPPVCRDCHHHPQEIQLAEVEQASLMSEQLSDKSSSLALPDDLSLDDHSVYQLLVRDSKEERGSSDSHSSEELRSSQARCGGSQTHSPQRKEGETGLLDVSLGPQSPAQRLLLLQQHQHTPTNSRGNTPAPRDGDTHPPQRVSLLLYPSSQWCFCHFPSQQPEGPVIHTNTTVLLMYELYEL
SIO_010081: LOC122128815
subclass of: SO_0000673
so part of: LOC122128815
location: join(854412..854528,859441..859619,860150..860276,860765..860890,861128..861217,861630..861822,864679..864830,866106..866215,867834..867967,869343..869413,872556..872634,873180..873301,873728..874198,881909..882055,886963..887097,888588..888959)
location: region:854412-888959:1
so has part: feature:854412-854528:1:exon
so has part: feature:859441-859619:1:exon
so has part: feature:860150-860276:1:exon
so has part: feature:860765-860890:1:exon
so has part: feature:861128-861217:1:exon
so has part: feature:861630-861822:1:exon
so has part: feature:864679-864830:1:exon
so has part: feature:866106-866215:1:exon
so has part: feature:867834-867967:1:exon
so has part: feature:869343-869413:1:exon
so has part: feature:872556-872634:1:exon
so has part: feature:873180-873301:1:exon
so has part: feature:873728-874198:1:exon
so has part: feature:881909-882055:1:exon
so has part: feature:886963-887097:1:exon
so has part: feature:888588-888959:1:exon

XP_042559587.1
type: Protein
SIO_000068: ncbiprotein

position:888959:1
position: 888959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854412-854528:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:859441-859619:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:860150-860276:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:860765-860890:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:861128-861217:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:861630-861822:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:864679-864830:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:866106-866215:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:867834-867967:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:869343-869413:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:872556-872634:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:873180-873301:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:873728-874198:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:881909-882055:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:886963-887097:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:888588-888959:1:exon

LOC116218999
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116218999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 889006..897594
location: region:889006-897594:1
so has part: feature:889006-897594:1:exon
subclass of: SO_0000010

116218999
type: Gene
SIO_000068: ncbigene

position:889006:1
position: 889006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897594:1
position: 897594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:889006-897594:1:exon

LOC116218999
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC116218999
product: voltage-dependent T-type calcium channel subunit alpha-1I-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_031561805.2
SIO_010081: LOC116218999
subclass of: SO_0000673
so part of: LOC116218999
location: join(889006..889372,890076..897594)
location: region:889006-897594:1
so has part: feature:889006-889372:1:exon
so has part: feature:890076-897594:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:889006-889372:1:exon

position:889372:1
position: 889372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:890076-897594:1:exon

position:890076:1
position: 890076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116218999
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC116218999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent T-type calcium channel subunit alpha-1I-like
translation: MPEPIDHPSIQPSDIHISPADGEELGGYISGAGGGGGGGGNSRGASPLFHLPAEFFHPASAVSQGSPVTGVVPADRVGSRLTSPASWASLRSPGANSRVVGSQHPSCSNSSLATGSSEGSLHTTLEEGLSFSISPPLPRDRDRDRPLLCPIPPPTTPSPRRQRRGAAGGRPSACFSLQATRGHQRSLSSCGGSSSSPSCPRQDSMDPSDEDTGLGMGIEGTSGCGSSQAGNSEHLSETLSSLSLTSLLCASSLAPPLVKKCNSTGNLEQGGGGLSVRSKDGRQLYGMEAQGYLSNPWTEEERGMGGVGGDRVPAGCLGVKSSSQTMDTGSRKNR
SIO_010081: LOC116218999
subclass of: SO_0000673
so part of: LOC116218999
location: join(889064..889372,890076..890771)
location: region:889064-890771:1
so has part: feature:889064-889372:1:exon
so has part: feature:890076-890771:1:exon

XP_031417665.1
type: Protein
SIO_000068: ncbiprotein

position:889064:1
position: 889064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890771:1
position: 890771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:889064-889372:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890076-890771:1:exon

zgc:92360
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: zgc:92360
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 910203..927003
location: region:910203-927003:1
so has part: feature:910203-927003:1:exon
subclass of: SO_0000010

105908856
type: Gene
SIO_000068: ncbigene

position:910203:1
position: 910203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927003:1
position: 927003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910203-927003:1:exon

zgc:92360
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: zgc:92360
product: uncharacterized protein LOC436988 homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_012837416.3
SIO_010081: zgc:92360
subclass of: SO_0000673
so part of: zgc:92360
location: join(910203..910710,914653..914783,915607..915698,919143..919225,919317..919429,920641..920787,921373..921456,921990..922052,922824..922895,925074..925305,926254..927003)
location: region:910203-927003:1
so has part: feature:910203-910710:1:exon
so has part: feature:914653-914783:1:exon
so has part: feature:915607-915698:1:exon
so has part: feature:919143-919225:1:exon
so has part: feature:919317-919429:1:exon
so has part: feature:920641-920787:1:exon
so has part: feature:921373-921456:1:exon
so has part: feature:921990-922052:1:exon
so has part: feature:922824-922895:1:exon
so has part: feature:925074-925305:1:exon
so has part: feature:926254-927003:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:910203-910710:1:exon

position:910710:1
position: 910710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:914653-914783:1:exon

position:914653:1
position: 914653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914783:1
position: 914783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:915607-915698:1:exon

position:915607:1
position: 915607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915698:1
position: 915698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:919143-919225:1:exon

position:919143:1
position: 919143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919225:1
position: 919225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:919317-919429:1:exon

position:919317:1
position: 919317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919429:1
position: 919429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:920641-920787:1:exon

position:920641:1
position: 920641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920787:1
position: 920787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:921373-921456:1:exon

position:921373:1
position: 921373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921456:1
position: 921456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:921990-922052:1:exon

position:921990:1
position: 921990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922052:1
position: 922052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:922824-922895:1:exon

position:922824:1
position: 922824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922895:1
position: 922895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:925074-925305:1:exon

position:925074:1
position: 925074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925305:1
position: 925305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:926254-927003:1:exon

position:926254:1
position: 926254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

zgc:92360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: zgc:92360
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP with dual PH domain-containing protein 1
translation: MSGNERAIRALRELLQKPGNQACADCGAPGPEWGSCSLGVFICLGCSGIHRNIPDIGKVKSLTLSHWEDSEVQFMAENGNAVAKSRYEAAVPVYYYKPTYKDGQVLRQQWIRAKYERKEFTEAGKKLTYEEATRDGMLMKRGRDNGQFLSRRFVLSEWEGTLKYFTKYDAKEPKAVIKMDTINASFQPEKIGNPNGLQITYLKDYSTRNIFVFHENGKEIVDWFNSIRAVQLHYLSVAFPGATDAELRPKLTRNFLKEGYMEKTGPRQTEGFKKRWFTLDHRRLMYFKDPLDAFAKGEVFLGNGELGYSASAGLPAGTHCNGSWSYGITILTPERSFLFTCETESEQQDWLRLFNGVLITQMSPQEYSMEALYKYKH
SIO_010081: zgc:92360
subclass of: SO_0000673
so part of: zgc:92360
location: join(910623..910710,914653..914783,915607..915698,919143..919225,919317..919429,920641..920787,921373..921456,921990..922052,922824..922895,925074..925305,926254..926282)
location: region:910623-926282:1
so has part: feature:910623-910710:1:exon
so has part: feature:914653-914783:1:exon
so has part: feature:915607-915698:1:exon
so has part: feature:919143-919225:1:exon
so has part: feature:919317-919429:1:exon
so has part: feature:920641-920787:1:exon
so has part: feature:921373-921456:1:exon
so has part: feature:921990-922052:1:exon
so has part: feature:922824-922895:1:exon
so has part: feature:925074-925305:1:exon
so has part: feature:926254-926282:1:exon

XP_012692870.1
type: Protein
SIO_000068: ncbiprotein

position:910623:1
position: 910623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926282:1
position: 926282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910623-910710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:914653-914783:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:915607-915698:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:919143-919225:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:919317-919429:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:920641-920787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:921373-921456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:921990-922052:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922824-922895:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:925074-925305:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:926254-926282:1:exon

LOC105908853
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105908853
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 927698..929207
location: region:927698-929207:1
so has part: feature:927698-929207:1:exon
subclass of: SO_0000010

105908853
type: Gene
SIO_000068: ncbigene

position:927698:1
position: 927698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929207:1
position: 929207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927698-929207:1:exon

LOC105908853
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105908853
product: urotensin-2 receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012837413.3
SIO_010081: LOC105908853
subclass of: SO_0000673
so part of: LOC105908853
location: 927698..929207
location: region:927698-929207:1
so has part: feature:927698-929207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:927698-929207:1:exon

LOC105908853
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105908853
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: urotensin-2 receptor
translation: MNQTPNVTSASGGGGSGAGGGGGGGGGSGAWVTSLLGATLLSMCVLGMAGNLYTLLVMRSAVLRRTGSMYVFILNLAMADLLYLGTIPFVVCTYFAHNWFFGETGCRILLSLDLLTMHASVFVLVAMSLERYRAVAAPFRARRSSNVRTHWLTALALWLLAFMLTLPMMVMIRLREGRPSSAGLVKRICFPTWTPEAFRAYLTVLFITSMLVPGLVMVGLYAGLAKRYWAAQANLARRSGGPGGGGERSVSSSSSRKRRRSLKHKVVAMIFSIVVCYWACFLPFWGWQLVKLFSPESLRELSPAAHTYVNFFVTCLTYGNSCVNPLLYTLLTRNYKDYLAQRSHSAGSSRTEVGSAAAGAPIAAGTQDL
SIO_010081: LOC105908853
subclass of: SO_0000673
so part of: LOC105908853
location: 928098..929207
location: region:928098-929207:1
so has part: feature:928098-929207:1:exon

XP_012692867.2
type: Protein
SIO_000068: ncbiprotein

position:928098:1
position: 928098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928098-929207:1:exon

lgals2b
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: lgals2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(932536..935939)
location: region:932536-935939:-1
so has part: feature:932536-935939:-1:exon
subclass of: SO_0000010

105908854
type: Gene
SIO_000068: ncbigene

position:932536:-1
position: 932536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935939:-1
position: 935939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932536-935939:-1:exon

lgals2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: lgals2b
product: lectin, galactoside-binding, soluble, 2b
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_012837414.3
SIO_010081: lgals2b
subclass of: SO_0000673
so part of: lgals2b
location: complement(join(932536..932988,933554..933725,934017..934093,935804..935939))
location: region:932536-935939:-1
so has part: feature:935804-935939:-1:exon
so has part: feature:934017-934093:-1:exon
so has part: feature:933554-933725:-1:exon
so has part: feature:932536-932988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:935804-935939:-1:exon

position:935804:-1
position: 935804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:934017-934093:-1:exon

position:934017:-1
position: 934017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934093:-1
position: 934093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:933554-933725:-1:exon

position:933554:-1
position: 933554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933725:-1
position: 933725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:932536-932988:-1:exon

position:932988:-1
position: 932988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lgals2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: lgals2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lectin, galactoside-binding, soluble, 2b
translation: MVVVKDMSFKAGQELKISGKAKEATAFYIEIGHDDDAIALHFNPRFDSHGDCNTIVCNSKQGGAWMDEHRESCFPFQPDEAFKVIITFNNETFYINLPDGTMMHFPNRFGDDKFKYIHFGGDAKMHSIKIK
SIO_010081: lgals2b
subclass of: SO_0000673
so part of: lgals2b
location: complement(join(932842..932988,933554..933725,934017..934093))
location: region:932842-934093:-1
so has part: feature:934017-934093:-1:exon
so has part: feature:933554-933725:-1:exon
so has part: feature:932842-932988:-1:exon

XP_012692868.1
type: Protein
SIO_000068: ncbiprotein

position:932842:-1
position: 932842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934017-934093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933554-933725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:932842-932988:-1:exon

LOC116219329
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116219329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 950066..955351
location: region:950066-955351:1
so has part: feature:950066-955351:1:exon
subclass of: SO_0000010

116219329
type: Gene
SIO_000068: ncbigene

position:950066:1
position: 950066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955351:1
position: 955351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950066-955351:1:exon

LOC116219329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC116219329
product: GTP-binding protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031562557.2
SIO_010081: LOC116219329
subclass of: SO_0000673
so part of: LOC116219329
location: join(950066..950142,951700..951888,952454..952565,954774..955351)
location: region:950066-955351:1
so has part: feature:950066-950142:1:exon
so has part: feature:951700-951888:1:exon
so has part: feature:952454-952565:1:exon
so has part: feature:954774-955351:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:950066-950142:1:exon

position:950142:1
position: 950142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:951700-951888:1:exon

position:951700:1
position: 951700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951888:1
position: 951888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:952454-952565:1:exon

position:952454:1
position: 952454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952565:1
position: 952565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:954774-955351:1:exon

position:954774:1
position: 954774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116219329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC116219329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP-binding protein 1-like isoform X1
translation: MATPPRIQPSYSPVTIEIIGMAATESSLCPSPIAVADTVVPACMFAPDRGNDDDPSGGDCYEDGEAHNGESEGHLDLTSKMVLVSPTGEQYDVLFRQLRERMDEGCGETIYVVGMGSDGADYGLNEQDMEASVATVQSLCETVEADIILLRERAETGGNVRDYLIRRRVGDADFLEVR
SIO_010081: LOC116219329
subclass of: SO_0000673
so part of: LOC116219329
location: join(950092..950142,951700..951888,952454..952565,954774..954958)
location: region:950092-954958:1
so has part: feature:950092-950142:1:exon
so has part: feature:951700-951888:1:exon
so has part: feature:952454-952565:1:exon
so has part: feature:954774-954958:1:exon

XP_031418417.1
type: Protein
SIO_000068: ncbiprotein

position:950092:1
position: 950092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954958:1
position: 954958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950092-950142:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:951700-951888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:952454-952565:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:954774-954958:1:exon

LOC116219329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC116219329
product: GTP-binding protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_031562560.2
SIO_010081: LOC116219329
subclass of: SO_0000673
so part of: LOC116219329
location: join(951158..951308,951700..951888,952454..952565,954774..955351)
location: region:951158-955351:1
so has part: feature:951158-951308:1:exon
so has part: feature:951700-951888:1:exon
so has part: feature:952454-952565:1:exon
so has part: feature:954774-955351:1:exon

position:951158:1
position: 951158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:951158-951308:1:exon

position:951308:1
position: 951308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:951700-951888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:952454-952565:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:954774-955351:1:exon

LOC116219329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC116219329
product: GTP-binding protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031562558.1
SIO_010081: LOC116219329
subclass of: SO_0000673
so part of: LOC116219329
location: join(951271..951333,951700..951888,952454..952565,954774..955351)
location: region:951271-955351:1
so has part: feature:951271-951333:1:exon
so has part: feature:951700-951888:1:exon
so has part: feature:952454-952565:1:exon
so has part: feature:954774-955351:1:exon

position:951271:1
position: 951271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:951271-951333:1:exon

position:951333:1
position: 951333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:951700-951888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:952454-952565:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:954774-955351:1:exon

LOC116219329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC116219329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP-binding protein 1-like isoform X2
translation: MAATESSLCPSPIAVADTVVPACMFAPDRGNDDDPSGGDCYEDGEAHNGESEGHLDLTSKMVLVSPTGEQYDVLFRQLRERMDEGCGETIYVVGMGSDGADYGLNEQDMEASVATVQSLCETVEADIILLRERAETGGNVRDYLIRRRVGDADFLEVR
SIO_010081: LOC116219329
subclass of: SO_0000673
so part of: LOC116219329
location: join(951709..951888,952454..952565,954774..954958)
location: region:951709-954958:1
so has part: feature:951709-951888:1:exon
so has part: feature:952454-952565:1:exon
so has part: feature:954774-954958:1:exon

XP_031418418.1
type: Protein
SIO_000068: ncbiprotein

position:951709:1
position: 951709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:951709-951888:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:952454-952565:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:954774-954958:1:exon

LOC116219329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC116219329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP-binding protein 1-like isoform X2
translation: MAATESSLCPSPIAVADTVVPACMFAPDRGNDDDPSGGDCYEDGEAHNGESEGHLDLTSKMVLVSPTGEQYDVLFRQLRERMDEGCGETIYVVGMGSDGADYGLNEQDMEASVATVQSLCETVEADIILLRERAETGGNVRDYLIRRRVGDADFLEVR
SIO_010081: LOC116219329
subclass of: SO_0000673
so part of: LOC116219329
location: join(951709..951888,952454..952565,954774..954958)
location: region:951709-954958:1
so has part: feature:951709-951888:1:exon
so has part: feature:952454-952565:1:exon
so has part: feature:954774-954958:1:exon

XP_031418420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:951709-951888:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:952454-952565:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:954774-954958:1:exon

LOC105900261
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105900261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 963498..980967
location: region:963498-980967:1
so has part: feature:963498-980967:1:exon
subclass of: SO_0000010

105900261
type: Gene
SIO_000068: ncbigene

position:963498:1
position: 963498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980967:1
position: 980967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:963498-980967:1:exon

LOC105900261
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105900261
product: GTP-binding protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031561910.2
SIO_010081: LOC105900261
subclass of: SO_0000673
so part of: LOC105900261
location: join(963498..963517,964944..965132,965698..965809,968082..968262,971755..971938,973674..973838,974424..974547,974719..974833,975995..976139,976822..977140,977760..977938,978387..978542,979244..979294,980787..980967)
location: region:963498-980967:1
so has part: feature:963498-963517:1:exon
so has part: feature:964944-965132:1:exon
so has part: feature:965698-965809:1:exon
so has part: feature:968082-968262:1:exon
so has part: feature:971755-971938:1:exon
so has part: feature:973674-973838:1:exon
so has part: feature:974424-974547:1:exon
so has part: feature:974719-974833:1:exon
so has part: feature:975995-976139:1:exon
so has part: feature:976822-977140:1:exon
so has part: feature:977760-977938:1:exon
so has part: feature:978387-978542:1:exon
so has part: feature:979244-979294:1:exon
so has part: feature:980787-980967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:963498-963517:1:exon

position:963517:1
position: 963517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:964944-965132:1:exon

position:964944:1
position: 964944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965132:1
position: 965132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:965698-965809:1:exon

position:965698:1
position: 965698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965809:1
position: 965809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:968082-968262:1:exon

position:968082:1
position: 968082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968262:1
position: 968262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:971755-971938:1:exon

position:971755:1
position: 971755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971938:1
position: 971938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:973674-973838:1:exon

position:973674:1
position: 973674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973838:1
position: 973838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:974424-974547:1:exon

position:974424:1
position: 974424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974547:1
position: 974547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:974719-974833:1:exon

position:974719:1
position: 974719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974833:1
position: 974833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:975995-976139:1:exon

position:975995:1
position: 975995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976139:1
position: 976139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:976822-977140:1:exon

position:976822:1
position: 976822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977140:1
position: 977140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:977760-977938:1:exon

position:977760:1
position: 977760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977938:1
position: 977938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:978387-978542:1:exon

position:978387:1
position: 978387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978542:1
position: 978542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:979244-979294:1:exon

position:979244:1
position: 979244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979294:1
position: 979294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:980787-980967:1:exon

position:980787:1
position: 980787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105900261
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105900261
product: GTP-binding protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_031561909.2
SIO_010081: LOC105900261
subclass of: SO_0000673
so part of: LOC105900261
location: join(964467..964552,964944..965132,965698..965809,968082..968262,971755..971938,973674..973838,974424..974547,974719..974833,975995..976139,976822..977140,977760..977938,978387..978542,979244..979294,980787..980966)
location: region:964467-980966:1
so has part: feature:964467-964552:1:exon
so has part: feature:964944-965132:1:exon
so has part: feature:965698-965809:1:exon
so has part: feature:968082-968262:1:exon
so has part: feature:971755-971938:1:exon
so has part: feature:973674-973838:1:exon
so has part: feature:974424-974547:1:exon
so has part: feature:974719-974833:1:exon
so has part: feature:975995-976139:1:exon
so has part: feature:976822-977140:1:exon
so has part: feature:977760-977938:1:exon
so has part: feature:978387-978542:1:exon
so has part: feature:979244-979294:1:exon
so has part: feature:980787-980966:1:exon

position:964467:1
position: 964467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980966:1
position: 980966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964467-964552:1:exon

position:964552:1
position: 964552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:964944-965132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:965698-965809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968082-968262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:971755-971938:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:973674-973838:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:974424-974547:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:974719-974833:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:975995-976139:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:976822-977140:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:977760-977938:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:978387-978542:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:979244-979294:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:980787-980966:1:exon

LOC105900261
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105900261
product: GTP-binding protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031561912.2
SIO_010081: LOC105900261
subclass of: SO_0000673
so part of: LOC105900261
location: join(964518..964577,964944..965132,965698..965809,968082..968262,971755..971938,973674..973838,974424..974547,974719..974833,975995..976139,976822..977140,977760..977938,978387..978542,979244..979294,980787..980966)
location: region:964518-980966:1
so has part: feature:964518-964577:1:exon
so has part: feature:964944-965132:1:exon
so has part: feature:965698-965809:1:exon
so has part: feature:968082-968262:1:exon
so has part: feature:971755-971938:1:exon
so has part: feature:973674-973838:1:exon
so has part: feature:974424-974547:1:exon
so has part: feature:974719-974833:1:exon
so has part: feature:975995-976139:1:exon
so has part: feature:976822-977140:1:exon
so has part: feature:977760-977938:1:exon
so has part: feature:978387-978542:1:exon
so has part: feature:979244-979294:1:exon
so has part: feature:980787-980966:1:exon

position:964518:1
position: 964518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964518-964577:1:exon

position:964577:1
position: 964577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:964944-965132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:965698-965809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968082-968262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:971755-971938:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:973674-973838:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:974424-974547:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:974719-974833:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:975995-976139:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:976822-977140:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:977760-977938:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:978387-978542:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:979244-979294:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:980787-980966:1:exon

LOC105900261
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105900261
product: GTP-binding protein 1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031561911.2
SIO_010081: LOC105900261
subclass of: SO_0000673
so part of: LOC105900261
location: join(964519..964577,964944..965132,965698..965809,968082..968262,971755..971938,973674..973838,974424..974547,974719..974833,975995..976139,976822..977140,977760..977938,978387..978542,980787..980961)
location: region:964519-980961:1
so has part: feature:964519-964577:1:exon
so has part: feature:964944-965132:1:exon
so has part: feature:965698-965809:1:exon
so has part: feature:968082-968262:1:exon
so has part: feature:971755-971938:1:exon
so has part: feature:973674-973838:1:exon
so has part: feature:974424-974547:1:exon
so has part: feature:974719-974833:1:exon
so has part: feature:975995-976139:1:exon
so has part: feature:976822-977140:1:exon
so has part: feature:977760-977938:1:exon
so has part: feature:978387-978542:1:exon
so has part: feature:980787-980961:1:exon

position:964519:1
position: 964519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980961:1
position: 980961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964519-964577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:964944-965132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:965698-965809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968082-968262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:971755-971938:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:973674-973838:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:974424-974547:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:974719-974833:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:975995-976139:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:976822-977140:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:977760-977938:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:978387-978542:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:980787-980961:1:exon

LOC105900261
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105900261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP-binding protein 1-like isoform X1
translation: MAATESSLCPSPIAVADTVVPACMFAPDRGSDDDPSGGDCYEDGEAHNGESEGHLDLTSKMVLVSPTGEQYDVLFRQLRERMDEGCGETIYVVGMGSDGADYGLNEQDMEASVATVQSLCETVEADIILLRERAETGGNVRDYLIRRRVGDADFLEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEMESGRTSSVGNDILGFDQHGQVVNKPDSHGGSLDWTKICERSSKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQNKDDVIVTASNFSSERMCPIFQISNVTGENMELLKMFLNLLSSRTTFRDDEPAEFQIDDTYSVPGVGTVVSGTTLRGLIRLNDTLLLGPDPLGSFIPIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLSPLACWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILTMNRDCLRTGDKALVHFRFIKTPEYLHVEQRLVFREGRTKAVGTISKLLQSANNMTSHSKPQLLKMQSSKKTFLREDGTTVSNEEAGLLEDGQSSAQQQPLGEEDLQSRDGNKENKPKQGGGGRRRGGQRHRGKGLTSLLVAPPAAGAAGSS
SIO_010081: LOC105900261
subclass of: SO_0000673
so part of: LOC105900261
location: join(964953..965132,965698..965809,968082..968262,971755..971938,973674..973838,974424..974547,974719..974833,975995..976139,976822..977140,977760..977938,978387..978542,979244..979294,980787..980897)
location: region:964953-980897:1
so has part: feature:964953-965132:1:exon
so has part: feature:965698-965809:1:exon
so has part: feature:968082-968262:1:exon
so has part: feature:971755-971938:1:exon
so has part: feature:973674-973838:1:exon
so has part: feature:974424-974547:1:exon
so has part: feature:974719-974833:1:exon
so has part: feature:975995-976139:1:exon
so has part: feature:976822-977140:1:exon
so has part: feature:977760-977938:1:exon
so has part: feature:978387-978542:1:exon
so has part: feature:979244-979294:1:exon
so has part: feature:980787-980897:1:exon

XP_031417769.1
type: Protein
SIO_000068: ncbiprotein

position:964953:1
position: 964953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980897:1
position: 980897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964953-965132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:965698-965809:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:968082-968262:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971755-971938:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:973674-973838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:974424-974547:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:974719-974833:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:975995-976139:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:976822-977140:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:977760-977938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:978387-978542:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:979244-979294:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:980787-980897:1:exon

LOC105900261
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105900261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP-binding protein 1-like isoform X1
translation: MAATESSLCPSPIAVADTVVPACMFAPDRGSDDDPSGGDCYEDGEAHNGESEGHLDLTSKMVLVSPTGEQYDVLFRQLRERMDEGCGETIYVVGMGSDGADYGLNEQDMEASVATVQSLCETVEADIILLRERAETGGNVRDYLIRRRVGDADFLEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEMESGRTSSVGNDILGFDQHGQVVNKPDSHGGSLDWTKICERSSKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQNKDDVIVTASNFSSERMCPIFQISNVTGENMELLKMFLNLLSSRTTFRDDEPAEFQIDDTYSVPGVGTVVSGTTLRGLIRLNDTLLLGPDPLGSFIPIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLSPLACWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILTMNRDCLRTGDKALVHFRFIKTPEYLHVEQRLVFREGRTKAVGTISKLLQSANNMTSHSKPQLLKMQSSKKTFLREDGTTVSNEEAGLLEDGQSSAQQQPLGEEDLQSRDGNKENKPKQGGGGRRRGGQRHRGKGLTSLLVAPPAAGAAGSS
SIO_010081: LOC105900261
subclass of: SO_0000673
so part of: LOC105900261
location: join(964953..965132,965698..965809,968082..968262,971755..971938,973674..973838,974424..974547,974719..974833,975995..976139,976822..977140,977760..977938,978387..978542,979244..979294,980787..980897)
location: region:964953-980897:1
so has part: feature:964953-965132:1:exon
so has part: feature:965698-965809:1:exon
so has part: feature:968082-968262:1:exon
so has part: feature:971755-971938:1:exon
so has part: feature:973674-973838:1:exon
so has part: feature:974424-974547:1:exon
so has part: feature:974719-974833:1:exon
so has part: feature:975995-976139:1:exon
so has part: feature:976822-977140:1:exon
so has part: feature:977760-977938:1:exon
so has part: feature:978387-978542:1:exon
so has part: feature:979244-979294:1:exon
so has part: feature:980787-980897:1:exon

XP_031417770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:964953-965132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:965698-965809:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:968082-968262:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971755-971938:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:973674-973838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:974424-974547:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:974719-974833:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:975995-976139:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:976822-977140:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:977760-977938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:978387-978542:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:979244-979294:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:980787-980897:1:exon

LOC105900261
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105900261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP-binding protein 1-like isoform X1
translation: MAATESSLCPSPIAVADTVVPACMFAPDRGSDDDPSGGDCYEDGEAHNGESEGHLDLTSKMVLVSPTGEQYDVLFRQLRERMDEGCGETIYVVGMGSDGADYGLNEQDMEASVATVQSLCETVEADIILLRERAETGGNVRDYLIRRRVGDADFLEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEMESGRTSSVGNDILGFDQHGQVVNKPDSHGGSLDWTKICERSSKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQNKDDVIVTASNFSSERMCPIFQISNVTGENMELLKMFLNLLSSRTTFRDDEPAEFQIDDTYSVPGVGTVVSGTTLRGLIRLNDTLLLGPDPLGSFIPIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLSPLACWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILTMNRDCLRTGDKALVHFRFIKTPEYLHVEQRLVFREGRTKAVGTISKLLQSANNMTSHSKPQLLKMQSSKKTFLREDGTTVSNEEAGLLEDGQSSAQQQPLGEEDLQSRDGNKENKPKQGGGGRRRGGQRHRGKGLTSLLVAPPAAGAAGSS
SIO_010081: LOC105900261
subclass of: SO_0000673
so part of: LOC105900261
location: join(964953..965132,965698..965809,968082..968262,971755..971938,973674..973838,974424..974547,974719..974833,975995..976139,976822..977140,977760..977938,978387..978542,979244..979294,980787..980897)
location: region:964953-980897:1
so has part: feature:964953-965132:1:exon
so has part: feature:965698-965809:1:exon
so has part: feature:968082-968262:1:exon
so has part: feature:971755-971938:1:exon
so has part: feature:973674-973838:1:exon
so has part: feature:974424-974547:1:exon
so has part: feature:974719-974833:1:exon
so has part: feature:975995-976139:1:exon
so has part: feature:976822-977140:1:exon
so has part: feature:977760-977938:1:exon
so has part: feature:978387-978542:1:exon
so has part: feature:979244-979294:1:exon
so has part: feature:980787-980897:1:exon

XP_031417772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:964953-965132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:965698-965809:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:968082-968262:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971755-971938:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:973674-973838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:974424-974547:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:974719-974833:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:975995-976139:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:976822-977140:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:977760-977938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:978387-978542:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:979244-979294:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:980787-980897:1:exon

LOC105900261
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105900261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP-binding protein 1-like isoform X2
translation: MAATESSLCPSPIAVADTVVPACMFAPDRGSDDDPSGGDCYEDGEAHNGESEGHLDLTSKMVLVSPTGEQYDVLFRQLRERMDEGCGETIYVVGMGSDGADYGLNEQDMEASVATVQSLCETVEADIILLRERAETGGNVRDYLIRRRVGDADFLEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEMESGRTSSVGNDILGFDQHGQVVNKPDSHGGSLDWTKICERSSKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQNKDDVIVTASNFSSERMCPIFQISNVTGENMELLKMFLNLLSSRTTFRDDEPAEFQIDDTYSVPGVGTVVSGTTLRGLIRLNDTLLLGPDPLGSFIPIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLSPLACWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILTMNRDCLRTGDKALVHFRFIKTPEYLHVEQRLVFREGRTKAVGTISKLLQSANNMTSHSKPQLLKMQSSKKTFLREDGTTVSNEEAGLLEDGQSSAQQQPKQGGGGRRRGGQRHRGKGLTSLLVAPPAAGAAGSS
SIO_010081: LOC105900261
subclass of: SO_0000673
so part of: LOC105900261
location: join(964953..965132,965698..965809,968082..968262,971755..971938,973674..973838,974424..974547,974719..974833,975995..976139,976822..977140,977760..977938,978387..978542,980787..980897)
location: region:964953-980897:1
so has part: feature:964953-965132:1:exon
so has part: feature:965698-965809:1:exon
so has part: feature:968082-968262:1:exon
so has part: feature:971755-971938:1:exon
so has part: feature:973674-973838:1:exon
so has part: feature:974424-974547:1:exon
so has part: feature:974719-974833:1:exon
so has part: feature:975995-976139:1:exon
so has part: feature:976822-977140:1:exon
so has part: feature:977760-977938:1:exon
so has part: feature:978387-978542:1:exon
so has part: feature:980787-980897:1:exon

XP_031417771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:964953-965132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:965698-965809:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:968082-968262:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971755-971938:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:973674-973838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:974424-974547:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:974719-974833:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:975995-976139:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:976822-977140:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:977760-977938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:978387-978542:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:980787-980897:1:exon

LOC105900237
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105900237
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1022739..1026425
location: region:1022739-1026425:1
so has part: feature:1022739-1026425:1:exon

105900237
type: Gene
SIO_000068: ncbigene

position:1022739:1
position: 1022739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026425:1
position: 1026425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1022739-1026425:1:exon

LOC105900237
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC105900237
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC105900237
subclass of: SO_0000673
so part of: LOC105900237
location: 1022739..1022855
location: region:1022739-1022855:1
so has part: feature:1022739-1022855:1:exon

position:1022855:1
position: 1022855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1022739-1022855:1:exon

LOC105900237
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC105900237
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC105900237
subclass of: SO_0000673
so part of: LOC105900237
location: 1023088..1023290
location: region:1023088-1023290:1
so has part: feature:1023088-1023290:1:exon

position:1023088:1
position: 1023088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023290:1
position: 1023290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023088-1023290:1:exon

LOC105900237
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC105900237
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC105900237
subclass of: SO_0000673
so part of: LOC105900237
location: 1023946..1024153
location: region:1023946-1024153:1
so has part: feature:1023946-1024153:1:exon

position:1023946:1
position: 1023946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024153:1
position: 1024153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023946-1024153:1:exon

LOC105900237
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC105900237
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC105900237
subclass of: SO_0000673
so part of: LOC105900237
location: 1024455..1024542
location: region:1024455-1024542:1
so has part: feature:1024455-1024542:1:exon

position:1024455:1
position: 1024455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024542:1
position: 1024542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1024455-1024542:1:exon

LOC105900237
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC105900237
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC105900237
subclass of: SO_0000673
so part of: LOC105900237
location: 1024651..1024745
location: region:1024651-1024745:1
so has part: feature:1024651-1024745:1:exon

position:1024651:1
position: 1024651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024745:1
position: 1024745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1024651-1024745:1:exon

LOC105900237
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC105900237
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC105900237
subclass of: SO_0000673
so part of: LOC105900237
location: 1025160..1025343
location: region:1025160-1025343:1
so has part: feature:1025160-1025343:1:exon

position:1025160:1
position: 1025160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025343:1
position: 1025343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025160-1025343:1:exon

LOC105900237
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC105900237
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC105900237
subclass of: SO_0000673
so part of: LOC105900237
location: 1025602..1026425
location: region:1025602-1026425:1
so has part: feature:1025602-1026425:1:exon

position:1025602:1
position: 1025602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025602-1026425:1:exon

LOC105900238
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105900238
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1108204..1229284)
location: region:1108204-1229284:-1
so has part: feature:1108204-1229284:-1:exon
subclass of: SO_0000010

105900238
type: Gene
SIO_000068: ncbigene

position:1108204:-1
position: 1108204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229284:-1
position: 1229284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1108204-1229284:-1:exon

LOC105900238
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105900238
product: protein phosphatase 1 regulatory subunit 29-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031562109.1
SIO_010081: LOC105900238
subclass of: SO_0000673
so part of: LOC105900238
location: complement(join(1108204..1112267,1171547..1171858,1229204..1229284))
location: region:1108204-1229284:-1
so has part: feature:1229204-1229284:-1:exon
so has part: feature:1171547-1171858:-1:exon
so has part: feature:1108204-1112267:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1229204-1229284:-1:exon

position:1229204:-1
position: 1229204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1171547-1171858:-1:exon

position:1171547:-1
position: 1171547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171858:-1
position: 1171858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1108204-1112267:-1:exon

position:1112267:-1
position: 1112267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105900238
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105900238
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 29-like
translation: MASRTCPPSGTPLSLSLLLALPVIALVSLCLPGLARGDCWLIEGEKGYVWLAICSQNQPPYETFPLQINNTVQDLRLNENKLKAIFFSSLSRFANLTELNLTKNEISYIEDGAFASQANLQVLQLGYNKLTNLTEGVLRGLGRMNSLFLQHNLIEVIATNAFWECPSLSSLDLSSNKLARIDPNTFTILNRLIVCELAGNPFHCGCELYSFLTWLEAFNNVTRTYDRLQCETPKELFTYPLLSPVPGHGRNARTILGSACRDGMIFPGIPSLPPDLDGSGYGPDTAQSGPYHQPTATSTSHPSYSISLKLHTVTPHSASLLVQLPSPFKKMYILTQYNHTSVADIVNLKLKKEVVTLNNLTPHTNYTFCVASIRNSQRYNHTCVDFTTRVATLEGVDSSRSTTTHYIMTILGCLFGMVIVLGLVYYCLRRRRMKEEKEKSISVKKTILEMRYGPEAAAAAVNDPSTLQKLHEQSHHHHHGKMPSSTSSSLGMLHGSANTSSSRLSSLPQVEKMATAFSEALASSKGNYMDIRTSAGGEVCDGGVPGTGGVVMRCENGPNGGEDSDDDGRGSTSEISTIAKEVDKVNQIINNCIDALKLDSVAVAAAAAATVTTADNLVPPSPACITTLPQRLIPLSPGITESCHVLASPKIAPPPHVPLVLPLSERPGISGGGFLSPPYRDPPPVTAARPMQRQVSADAAVVVVAPGKTRCSVSSSGGSVNSACMYSLDVPEPRSPNLCKYPDKGSPVRCGEVPLERLPLVGVQGSGGGGGGSGTRGGGGGGGGSGGGGGCGGVGGGGGGVGGGGTGHQQQHHLEVHPDYHCSEHRHSFPALYYEGATDSPAQKASFLKPLTHTKRDAAYSQLSPRHHNYSGYSSSPEYSSENTLRIWERFRPYKKSPREEAYIAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL
SIO_010081: LOC105900238
subclass of: SO_0000673
so part of: LOC105900238
location: complement(1109064..1111880)
location: region:1109064-1111880:-1
so has part: feature:1109064-1111880:-1:exon

XP_031417969.1
type: Protein
SIO_000068: ncbiprotein

position:1109064:-1
position: 1109064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1111880:-1
position: 1111880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109064-1111880:-1:exon

LOC116219173
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116219173
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1260643..1262538
location: region:1260643-1262538:1
so has part: feature:1260643-1262538:1:exon
subclass of: SO_0000011

116219173
type: Gene
SIO_000068: ncbigene

position:1260643:1
position: 1260643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262538:1
position: 1262538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1260643-1262538:1:exon

LOC116219173
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7950
nc RNA class: lncRNA
gene: LOC116219173
product: uncharacterized LOC116219173
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004163103.1
SIO_010081: LOC116219173
subclass of: SO_0000673
so part of: LOC116219173
location: join(1260643..1260730,1261508..1262538)
location: region:1260643-1262538:1
so has part: feature:1260643-1260730:1:exon
so has part: feature:1261508-1262538:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1260643-1260730:1:exon

position:1260730:1
position: 1260730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1261508-1262538:1:exon

position:1261508:1
position: 1261508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116219373
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1294623..1310222
location: region:1294623-1310222:1
so has part: feature:1294623-1310222:1:exon

116219373
type: Gene
SIO_000068: ncbigene

position:1294623:1
position: 1294623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1310222:1
position: 1310222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294623-1310222:1:exon

LOC116219373
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219373
subclass of: SO_0000673
so part of: LOC116219373
location: 1294623..1295720
location: region:1294623-1295720:1
so has part: feature:1294623-1295720:1:exon

position:1295720:1
position: 1295720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294623-1295720:1:exon

LOC116219373
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219373
subclass of: SO_0000673
so part of: LOC116219373
location: 1295815..1296003
location: region:1295815-1296003:1
so has part: feature:1295815-1296003:1:exon

position:1295815:1
position: 1295815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296003:1
position: 1296003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295815-1296003:1:exon

LOC116219373
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219373
subclass of: SO_0000673
so part of: LOC116219373
location: 1296479..1296604
location: region:1296479-1296604:1
so has part: feature:1296479-1296604:1:exon

position:1296479:1
position: 1296479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296604:1
position: 1296604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296479-1296604:1:exon

LOC116219373
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219373
subclass of: SO_0000673
so part of: LOC116219373
location: 1296868..1296968
location: region:1296868-1296968:1
so has part: feature:1296868-1296968:1:exon

position:1296868:1
position: 1296868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296968:1
position: 1296968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296868-1296968:1:exon

LOC116219373
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219373
subclass of: SO_0000673
so part of: LOC116219373
location: 1297117..1297243
location: region:1297117-1297243:1
so has part: feature:1297117-1297243:1:exon

position:1297117:1
position: 1297117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297243:1
position: 1297243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1297117-1297243:1:exon

LOC116219373
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219373
subclass of: SO_0000673
so part of: LOC116219373
location: 1297548..1297704
location: region:1297548-1297704:1
so has part: feature:1297548-1297704:1:exon

position:1297548:1
position: 1297548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297704:1
position: 1297704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1297548-1297704:1:exon

LOC116219373
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219373
subclass of: SO_0000673
so part of: LOC116219373
location: 1297814..1297928
location: region:1297814-1297928:1
so has part: feature:1297814-1297928:1:exon

position:1297814:1
position: 1297814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297928:1
position: 1297928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1297814-1297928:1:exon

LOC116219373
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219373
subclass of: SO_0000673
so part of: LOC116219373
location: 1298438..1298549
location: region:1298438-1298549:1
so has part: feature:1298438-1298549:1:exon

position:1298438:1
position: 1298438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298549:1
position: 1298549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298438-1298549:1:exon

LOC116219373
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219373
subclass of: SO_0000673
so part of: LOC116219373
location: 1298974..1299075
location: region:1298974-1299075:1
so has part: feature:1298974-1299075:1:exon

position:1298974:1
position: 1298974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299075:1
position: 1299075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298974-1299075:1:exon

LOC116219373
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219373
subclass of: SO_0000673
so part of: LOC116219373
location: 1299408..1299509
location: region:1299408-1299509:1
so has part: feature:1299408-1299509:1:exon

position:1299408:1
position: 1299408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299509:1
position: 1299509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1299408-1299509:1:exon

LOC116219373
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219373
subclass of: SO_0000673
so part of: LOC116219373
location: 1300356..1300443
location: region:1300356-1300443:1
so has part: feature:1300356-1300443:1:exon

position:1300356:1
position: 1300356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300443:1
position: 1300443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1300356-1300443:1:exon

LOC116219373
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219373
subclass of: SO_0000673
so part of: LOC116219373
location: 1300950..1301113
location: region:1300950-1301113:1
so has part: feature:1300950-1301113:1:exon

position:1300950:1
position: 1300950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1301113:1
position: 1301113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1300950-1301113:1:exon

LOC116219373
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219373
subclass of: SO_0000673
so part of: LOC116219373
location: 1301466..1301614
location: region:1301466-1301614:1
so has part: feature:1301466-1301614:1:exon

position:1301466:1
position: 1301466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1301614:1
position: 1301614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1301466-1301614:1:exon

LOC116219373
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219373
subclass of: SO_0000673
so part of: LOC116219373
location: 1302543..1302654
location: region:1302543-1302654:1
so has part: feature:1302543-1302654:1:exon

position:1302543:1
position: 1302543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1302654:1
position: 1302654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1302543-1302654:1:exon

LOC116219373
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219373
subclass of: SO_0000673
so part of: LOC116219373
location: 1303328..1303464
location: region:1303328-1303464:1
so has part: feature:1303328-1303464:1:exon

position:1303328:1
position: 1303328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1303464:1
position: 1303464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1303328-1303464:1:exon

LOC116219373
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219373
subclass of: SO_0000673
so part of: LOC116219373
location: 1303667..1303849
location: region:1303667-1303849:1
so has part: feature:1303667-1303849:1:exon

position:1303667:1
position: 1303667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1303849:1
position: 1303849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1303667-1303849:1:exon

LOC116219373
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219373
subclass of: SO_0000673
so part of: LOC116219373
location: 1304389..1304521
location: region:1304389-1304521:1
so has part: feature:1304389-1304521:1:exon

position:1304389:1
position: 1304389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1304521:1
position: 1304521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1304389-1304521:1:exon

LOC116219373
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116219373
subclass of: SO_0000673
so part of: LOC116219373
location: 1310043..1310222
location: region:1310043-1310222:1
so has part: feature:1310043-1310222:1:exon

position:1310043:1
position: 1310043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1310043-1310222:1:exon

LOC116219374
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116219374
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1310332..1314473
location: region:1310332-1314473:1
so has part: feature:1310332-1314473:1:exon
subclass of: SO_0000010

116219374
type: Gene
SIO_000068: ncbigene

position:1310332:1
position: 1310332
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1314473:1
position: 1314473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1310332-1314473:1:exon

LOC116219374
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC116219374
product: tRNA (guanine(26)-N(2))-dimethyltransferase-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_031562654.2
SIO_010081: LOC116219374
subclass of: SO_0000673
so part of: LOC116219374
location: join(<1310332..1310472,1310770..1310855,1312225..1312333,1312668..1312744,1312934..1313053,1313186..1313300,1313900..1314473)
location: region:1310332-1314473:1
so has part: feature:1310332-1310472:1:exon
so has part: feature:1310770-1310855:1:exon
so has part: feature:1312225-1312333:1:exon
so has part: feature:1312668-1312744:1:exon
so has part: feature:1312934-1313053:1:exon
so has part: feature:1313186-1313300:1:exon
so has part: feature:1313900-1314473:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1310332-1310472:1:exon

position:1310472:1
position: 1310472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1310770-1310855:1:exon

position:1310770:1
position: 1310770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1310855:1
position: 1310855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1312225-1312333:1:exon

position:1312225:1
position: 1312225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1312333:1
position: 1312333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1312668-1312744:1:exon

position:1312668:1
position: 1312668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1312744:1
position: 1312744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1312934-1313053:1:exon

position:1312934:1
position: 1312934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1313053:1
position: 1313053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1313186-1313300:1:exon

position:1313186:1
position: 1313186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1313300:1
position: 1313300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1313900-1314473:1:exon

position:1313900:1
position: 1313900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116219374
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC116219374
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase-like
translation: PQLGGPIWADPIHDIEFVQKVLSAVSTNPSRFGTSKRIEGMLSMMTEELPDVPLYYALDHLCSTVHCNTPAMLQFRSALLHAGYRVSMSHASRNGLKTDAPPGVIWDLLRCWEKANPVKRERLSETSPAFRILSTEPTLQACFDVREDANPQSRKRHLVRFQENPQANWGPKARAKDSGGISSELEDKRKLCQNKRKNQVTDASQLKNFPCKRFRKGTCTHGDKCCYSHESASDEADKME
SIO_010081: LOC116219374
subclass of: SO_0000673
so part of: LOC116219374
location: join(<1310332..1310472,1310770..1310855,1312225..1312333,1312668..1312744,1312934..1313053,1313186..1313300,1313900..1313974)
location: region:1310332-1313974:1
so has part: feature:1310332-1310472:1:exon
so has part: feature:1310770-1310855:1:exon
so has part: feature:1312225-1312333:1:exon
so has part: feature:1312668-1312744:1:exon
so has part: feature:1312934-1313053:1:exon
so has part: feature:1313186-1313300:1:exon
so has part: feature:1313900-1313974:1:exon

XP_031418514.2
type: Protein
SIO_000068: ncbiprotein

position:1313974:1
position: 1313974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1310332-1310472:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1310770-1310855:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1312225-1312333:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1312668-1312744:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1312934-1313053:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1313186-1313300:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1313900-1313974:1:exon

man2b1
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: man2b1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1314978..1328896)
location: region:1314978-1328896:-1
so has part: feature:1314978-1328896:-1:exon
subclass of: SO_0000010

105900241
type: Gene
SIO_000068: ncbigene

position:1314978:-1
position: 1314978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1328896:-1
position: 1328896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1314978-1328896:-1:exon

man2b1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: man2b1
product: mannosidase, alpha, class 2B, member 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_031561895.2
SIO_010081: man2b1
subclass of: SO_0000673
so part of: man2b1
location: complement(join(1314978..1315684,1316167..1316269,1316740..1316889,1317394..1317618,1317963..1318043,1318693..1318780,1319023..1319124,1319294..1319412,1319578..1319698,1321077..1321174,1321570..1321752,1322066..1322182,1322342..1322449,1322853..1322962,1323308..1323386,1324339..1324459,1325178..1325377,1325660..1325805,1326484..1326616,1326942..1327135,1327634..1327807,1328401..1328503,1328755..1328896))
location: region:1314978-1328896:-1
so has part: feature:1328755-1328896:-1:exon
so has part: feature:1328401-1328503:-1:exon
so has part: feature:1327634-1327807:-1:exon
so has part: feature:1326942-1327135:-1:exon
so has part: feature:1326484-1326616:-1:exon
so has part: feature:1325660-1325805:-1:exon
so has part: feature:1325178-1325377:-1:exon
so has part: feature:1324339-1324459:-1:exon
so has part: feature:1323308-1323386:-1:exon
so has part: feature:1322853-1322962:-1:exon
so has part: feature:1322342-1322449:-1:exon
so has part: feature:1322066-1322182:-1:exon
so has part: feature:1321570-1321752:-1:exon
so has part: feature:1321077-1321174:-1:exon
so has part: feature:1319578-1319698:-1:exon
so has part: feature:1319294-1319412:-1:exon
so has part: feature:1319023-1319124:-1:exon
so has part: feature:1318693-1318780:-1:exon
so has part: feature:1317963-1318043:-1:exon
so has part: feature:1317394-1317618:-1:exon
so has part: feature:1316740-1316889:-1:exon
so has part: feature:1316167-1316269:-1:exon
so has part: feature:1314978-1315684:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1328755-1328896:-1:exon

position:1328755:-1
position: 1328755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1328401-1328503:-1:exon

position:1328401:-1
position: 1328401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1328503:-1
position: 1328503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1327634-1327807:-1:exon

position:1327634:-1
position: 1327634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327807:-1
position: 1327807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1326942-1327135:-1:exon

position:1326942:-1
position: 1326942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327135:-1
position: 1327135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1326484-1326616:-1:exon

position:1326484:-1
position: 1326484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1326616:-1
position: 1326616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1325660-1325805:-1:exon

position:1325660:-1
position: 1325660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1325805:-1
position: 1325805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1325178-1325377:-1:exon

position:1325178:-1
position: 1325178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1325377:-1
position: 1325377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1324339-1324459:-1:exon

position:1324339:-1
position: 1324339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1324459:-1
position: 1324459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1323308-1323386:-1:exon

position:1323308:-1
position: 1323308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1323386:-1
position: 1323386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1322853-1322962:-1:exon

position:1322853:-1
position: 1322853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1322962:-1
position: 1322962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1322342-1322449:-1:exon

position:1322342:-1
position: 1322342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1322449:-1
position: 1322449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1322066-1322182:-1:exon

position:1322066:-1
position: 1322066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1322182:-1
position: 1322182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1321570-1321752:-1:exon

position:1321570:-1
position: 1321570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1321752:-1
position: 1321752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1321077-1321174:-1:exon

position:1321077:-1
position: 1321077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1321174:-1
position: 1321174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1319578-1319698:-1:exon

position:1319578:-1
position: 1319578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1319698:-1
position: 1319698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1319294-1319412:-1:exon

position:1319294:-1
position: 1319294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1319412:-1
position: 1319412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1319023-1319124:-1:exon

position:1319023:-1
position: 1319023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1319124:-1
position: 1319124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1318693-1318780:-1:exon

position:1318693:-1
position: 1318693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1318780:-1
position: 1318780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1317963-1318043:-1:exon

position:1317963:-1
position: 1317963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1318043:-1
position: 1318043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1317394-1317618:-1:exon

position:1317394:-1
position: 1317394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1317618:-1
position: 1317618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1316740-1316889:-1:exon

position:1316740:-1
position: 1316740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1316889:-1
position: 1316889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1316167-1316269:-1:exon

position:1316167:-1
position: 1316167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1316269:-1
position: 1316269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1314978-1315684:-1:exon

position:1315684:-1
position: 1315684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

man2b1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: man2b1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal alpha-mannosidase
translation: MAAYQYTAVLVFSLLQASVSGFPTNIRDPVCGYKSCPATQPSMLNVHLVPHTHDDVGWLKTVDQYYYGDRNDIQHAGVQYILDSVVEELQKDPSRRFIYVESAFFYRWWKQQNQATRSIVTQLVNEGRLEFINGGWCMSDEATTHYSAVIDQMTLGLRFLNDTFGPCGRPRVAWHIDPFGHAREHASIFAQMGYDGFFFGRLDYQDKDRRKKTKELELLWRASESLSAPTADLFTGILPNGYNPPDGFCWDQSCEDAPIRDDPDLEDFNVDDMVQMFLETAHNQSKFYKSNHIIMTMGSDFQYENANLWYKNMDKLIRYVNGQQAAGSRVNVLYSTPSCYLQELHRANTTWALKTDDFFPYADDAHDFWTGYFTSRPALKRYERLSNSHLQTCNQLEVLGGPKSRSGPFGKGDSDTMRKAMAVAQHHDAVSGTEKQHVANDYARRLATGWAHCQVLVRNSLAVLSGSDARRFFCENLNISVCSLTETSKMFTMNVYNPLARPVSWSVRLPVNGSAYSVTDAQGKPVTNEVIPLSKATMALRGQRGSALNELVFQVQAPPLGYTTYSISLLQNRPPPPPPRPKAPLTMQNKFLKVTFDPATGLLSSLSNLETKQSIKLSQNFYWYNASAGNNEESDQPSGAYIFRPNCSTPFIISKTAKIQTVQNGVVQEVRQWFSPWVSQVVRLYAESRELELEWTVGPVPVEDALGKEVISRLDTDINTSGYFYTDSNGREVLERRRDYRPTWDLLQSEPIAGNYYPINSRAFIKDKESQLTVVTDRSQGGSSIVDGSLEIMLHRRLLYDDVRGVAEPLNETGEAGAEGLVVRGRLLLTLTPPDTAADAHRPLAQAQVLQPLLSFQKGPAQPSTRLQFSGLQAALPPAVHLLTVSQWDYDSVLLRLEHQYQSKESKAFSQPVTVNLQKLFSNLEVLGATEMSLGANQWKSEMSRLDWRPSSDAGAPPPKRPADPSSLDVTLHPMEIRTFLLRVWQS
SIO_010081: man2b1
subclass of: SO_0000673
so part of: man2b1
location: complement(join(1315578..1315684,1316167..1316269,1316740..1316889,1317394..1317618,1317963..1318043,1318693..1318780,1319023..1319124,1319294..1319412,1319578..1319698,1321077..1321174,1321570..1321752,1322066..1322182,1322342..1322449,1322853..1322962,1323308..1323386,1324339..1324459,1325178..1325377,1325660..1325805,1326484..1326616,1326942..1327135,1327634..1327807,1328401..1328503,1328755..1328856))
location: region:1315578-1328856:-1
so has part: feature:1328755-1328856:-1:exon
so has part: feature:1328401-1328503:-1:exon
so has part: feature:1327634-1327807:-1:exon
so has part: feature:1326942-1327135:-1:exon
so has part: feature:1326484-1326616:-1:exon
so has part: feature:1325660-1325805:-1:exon
so has part: feature:1325178-1325377:-1:exon
so has part: feature:1324339-1324459:-1:exon
so has part: feature:1323308-1323386:-1:exon
so has part: feature:1322853-1322962:-1:exon
so has part: feature:1322342-1322449:-1:exon
so has part: feature:1322066-1322182:-1:exon
so has part: feature:1321570-1321752:-1:exon
so has part: feature:1321077-1321174:-1:exon
so has part: feature:1319578-1319698:-1:exon
so has part: feature:1319294-1319412:-1:exon
so has part: feature:1319023-1319124:-1:exon
so has part: feature:1318693-1318780:-1:exon
so has part: feature:1317963-1318043:-1:exon
so has part: feature:1317394-1317618:-1:exon
so has part: feature:1316740-1316889:-1:exon
so has part: feature:1316167-1316269:-1:exon
so has part: feature:1315578-1315684:-1:exon

XP_031417755.1
type: Protein
SIO_000068: ncbiprotein

position:1315578:-1
position: 1315578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1328856:-1
position: 1328856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1328755-1328856:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1328401-1328503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1327634-1327807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1326942-1327135:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1326484-1326616:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1325660-1325805:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1325178-1325377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1324339-1324459:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1323308-1323386:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1322853-1322962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322342-1322449:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1322066-1322182:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1321570-1321752:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1321077-1321174:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1319578-1319698:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1319294-1319412:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1319023-1319124:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1318693-1318780:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1317963-1318043:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1317394-1317618:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1316740-1316889:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1316167-1316269:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1315578-1315684:-1:exon

LOC105900240
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105900240
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1329099..1339906)
location: region:1329099-1339906:-1
so has part: feature:1329099-1339906:-1:exon
subclass of: SO_0000010

105900240
type: Gene
SIO_000068: ncbigene

position:1329099:-1
position: 1329099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1339906:-1
position: 1339906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1329099-1339906:-1:exon

LOC105900240
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105900240
product: E3 ubiquitin/ISG15 ligase TRIM25-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031561897.2
SIO_010081: LOC105900240
subclass of: SO_0000673
so part of: LOC105900240
location: complement(join(1329099..1331577,1332897..1332977,1333761..1333805,1335079..1335238,1336325..1336558,1338462..1338557,1339033..1339906))
location: region:1329099-1339906:-1
so has part: feature:1339033-1339906:-1:exon
so has part: feature:1338462-1338557:-1:exon
so has part: feature:1336325-1336558:-1:exon
so has part: feature:1335079-1335238:-1:exon
so has part: feature:1333761-1333805:-1:exon
so has part: feature:1332897-1332977:-1:exon
so has part: feature:1329099-1331577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1339033-1339906:-1:exon

position:1339033:-1
position: 1339033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1338462-1338557:-1:exon

position:1338462:-1
position: 1338462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338557:-1
position: 1338557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1336325-1336558:-1:exon

position:1336325:-1
position: 1336325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1336558:-1
position: 1336558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1335079-1335238:-1:exon

position:1335079:-1
position: 1335079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335238:-1
position: 1335238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1333761-1333805:-1:exon

position:1333761:-1
position: 1333761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333805:-1
position: 1333805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1332897-1332977:-1:exon

position:1332897:-1
position: 1332897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1332977:-1
position: 1332977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1329099-1331577:-1:exon

position:1331577:-1
position: 1331577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105900240
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105900240
product: E3 ubiquitin/ISG15 ligase TRIM25-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031561896.2
SIO_010081: LOC105900240
subclass of: SO_0000673
so part of: LOC105900240
location: complement(join(1329099..1331577,1332897..1332977,1333568..1333621,1333761..1333805,1335079..1335238,1336325..1336558,1338462..1338557,1339033..1339905))
location: region:1329099-1339905:-1
so has part: feature:1339033-1339905:-1:exon
so has part: feature:1338462-1338557:-1:exon
so has part: feature:1336325-1336558:-1:exon
so has part: feature:1335079-1335238:-1:exon
so has part: feature:1333761-1333805:-1:exon
so has part: feature:1333568-1333621:-1:exon
so has part: feature:1332897-1332977:-1:exon
so has part: feature:1329099-1331577:-1:exon

position:1339905:-1
position: 1339905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1339033-1339905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1338462-1338557:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1336325-1336558:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335079-1335238:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1333761-1333805:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1333568-1333621:-1:exon

position:1333568:-1
position: 1333568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333621:-1
position: 1333621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1332897-1332977:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1329099-1331577:-1:exon

LOC105900240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105900240
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin/ISG15 ligase TRIM25-like isoform X2
translation: MAQANISVTESQFRCPICLDILNDPVSIPCGHTYCMLCMNSYWDQAVSGPYSCPQCRETFSPRPVLRRNTVLAEVVEKLKLTDALSSTAPELYRGVGDVPCDFCSIDGKLKAVKSCLACLASYCELHVAPHREVGTLRRHKLVAAIDNLPDRLCAQHRLGLEGGGPDTEASEWSGDCLLCESDQEELHHVDTQRARRQAQLQDSQRTVQLRIRSGERELEECQQTFESLKCSAGAVREESEVLFGELAQRMEKAGQEVRARLEARERAVLGRVEHSGEELRCELDELRRREQEMSQLLLSEDNAHFLQAAPLLCILPASGRRPRAAGVPTECFRATRRALCHLRSRMEELCGEEVDKISRAVNDSAAHPVSAESQKVSVPIAFPVSILALQPSDQRMRSTFLRYACRLTLDPDTAHPTLFLMDGPQGAHCGEEPQAYPLHPLRFDSVAQVLCKEGQFGGASYWEVEWQGGGWVDVGVTYRAVGRKGGGKPCLLGRNDNSWRLRCTHAGYAAWHDNRKITVAAEPSPRIGVFLDRHKGELSFYRLANTVELLHMFRCPFSQPLYPAFRLDLDSTLLICPLERGNGDSSTT
SIO_010081: LOC105900240
subclass of: SO_0000673
so part of: LOC105900240
location: complement(join(1331018..1331577,1332897..1332977,1333761..1333805,1335079..1335238,1336325..1336558,1338462..1338557,1339033..1339626))
location: region:1331018-1339626:-1
so has part: feature:1339033-1339626:-1:exon
so has part: feature:1338462-1338557:-1:exon
so has part: feature:1336325-1336558:-1:exon
so has part: feature:1335079-1335238:-1:exon
so has part: feature:1333761-1333805:-1:exon
so has part: feature:1332897-1332977:-1:exon
so has part: feature:1331018-1331577:-1:exon

XP_031417757.1
type: Protein
SIO_000068: ncbiprotein

position:1331018:-1
position: 1331018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1339626:-1
position: 1339626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1339033-1339626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1338462-1338557:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1336325-1336558:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335079-1335238:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1333761-1333805:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1332897-1332977:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1331018-1331577:-1:exon

LOC105900240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105900240
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
translation: MAQANISVTESQFRCPICLDILNDPVSIPCGHTYCMLCMNSYWDQAVSGPYSCPQCRETFSPRPVLRRNTVLAEVVEKLKLTDALSSTAPELYRGVGDVPCDFCSIDGKLKAVKSCLACLASYCELHVAPHREVGTLRRHKLVAAIDNLPDRLCAQHRLGLEGGGPDTEASEWSGDCLLCESDQEELHHVDTQRARRQAQLQDSQRTVQLRIRSGERELEECQQTFESLKCSAGAVREESEVLFGELAQRMEKAGQEVRARLEARERAVLGRVEHSGEELRCELDELRRREQEMSQLLLSEDNAHFLQAAPLLCILPASGRRPRAAGVPTECFRATRRALCHLRSRMEELCGEEVDKISRAVNDSAAHPVSAESQKAWSPGASHNKNTDRQSQSVSVPIAFPVSILALQPSDQRMRSTFLRYACRLTLDPDTAHPTLFLMDGPQGAHCGEEPQAYPLHPLRFDSVAQVLCKEGQFGGASYWEVEWQGGGWVDVGVTYRAVGRKGGGKPCLLGRNDNSWRLRCTHAGYAAWHDNRKITVAAEPSPRIGVFLDRHKGELSFYRLANTVELLHMFRCPFSQPLYPAFRLDLDSTLLICPLERGNGDSSTT
SIO_010081: LOC105900240
subclass of: SO_0000673
so part of: LOC105900240
location: complement(join(1331018..1331577,1332897..1332977,1333568..1333621,1333761..1333805,1335079..1335238,1336325..1336558,1338462..1338557,1339033..1339626))
location: region:1331018-1339626:-1
so has part: feature:1339033-1339626:-1:exon
so has part: feature:1338462-1338557:-1:exon
so has part: feature:1336325-1336558:-1:exon
so has part: feature:1335079-1335238:-1:exon
so has part: feature:1333761-1333805:-1:exon
so has part: feature:1333568-1333621:-1:exon
so has part: feature:1332897-1332977:-1:exon
so has part: feature:1331018-1331577:-1:exon

XP_031417756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1339033-1339626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1338462-1338557:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1336325-1336558:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335079-1335238:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1333761-1333805:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1333568-1333621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1332897-1332977:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1331018-1331577:-1:exon

LOC105900259
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105900259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1344288..1348654)
location: region:1344288-1348654:-1
so has part: feature:1344288-1348654:-1:exon
subclass of: SO_0000010

105900259
type: Gene
SIO_000068: ncbigene

position:1344288:-1
position: 1344288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348654:-1
position: 1348654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1344288-1348654:-1:exon

LOC105900259
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105900259
product: amine sulfotransferase-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_012827522.3
SIO_010081: LOC105900259
subclass of: SO_0000673
so part of: LOC105900259
location: complement(join(1344288..1344969,1345321..1345501,1345641..1345735,1346259..1346385,1346806..1347011,1348289..1348654))
location: region:1344288-1348654:-1
so has part: feature:1348289-1348654:-1:exon
so has part: feature:1346806-1347011:-1:exon
so has part: feature:1346259-1346385:-1:exon
so has part: feature:1345641-1345735:-1:exon
so has part: feature:1345321-1345501:-1:exon
so has part: feature:1344288-1344969:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1348289-1348654:-1:exon

position:1348289:-1
position: 1348289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1346806-1347011:-1:exon

position:1346806:-1
position: 1346806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347011:-1
position: 1347011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1346259-1346385:-1:exon

position:1346259:-1
position: 1346259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346385:-1
position: 1346385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1345641-1345735:-1:exon

position:1345641:-1
position: 1345641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345735:-1
position: 1345735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1345321-1345501:-1:exon

position:1345321:-1
position: 1345321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345501:-1
position: 1345501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1344288-1344969:-1:exon

position:1344969:-1
position: 1344969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105900259
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105900259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amine sulfotransferase-like
translation: MAQQEYKLLGDKLFAYKGTVFPVDDTQELTTEYIDSLENFEIKDSDVFVVTFPKSGTVWTQRIVTLIYEEDFPELENEVTFLRMPWLEFLEKGKDYSTRPSPRLFCSHLQQHLMPRGLQQHRGKIIYVMRNPKDAMVSYFHFAKFMKKLDSPPDYDEMLDKFFTGWMIGGRWFDHVKGWHTNKDNYNILFLTYEEMIKDLRSVVVRICEFVGKNLSDAAIDSVVERVTFKNMKNDAKANYEFLPEDVKDPTKGKFLRKGTIGDWKNSLTVAQSERFDQVYQERMRNLPLQFIWDVKELHG
SIO_010081: LOC105900259
subclass of: SO_0000673
so part of: LOC105900259
location: complement(join(1344842..1344969,1345321..1345501,1345641..1345735,1346259..1346385,1346806..1347011,1348289..1348454))
location: region:1344842-1348454:-1
so has part: feature:1348289-1348454:-1:exon
so has part: feature:1346806-1347011:-1:exon
so has part: feature:1346259-1346385:-1:exon
so has part: feature:1345641-1345735:-1:exon
so has part: feature:1345321-1345501:-1:exon
so has part: feature:1344842-1344969:-1:exon

XP_012682976.2
type: Protein
SIO_000068: ncbiprotein

position:1344842:-1
position: 1344842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348454:-1
position: 1348454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1348289-1348454:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1346806-1347011:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1346259-1346385:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1345641-1345735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1345321-1345501:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1344842-1344969:-1:exon

LOC105900239
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105900239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1357099..1369841
location: region:1357099-1369841:1
so has part: feature:1357099-1369841:1:exon
subclass of: SO_0000010

105900239
type: Gene
SIO_000068: ncbigene

position:1357099:1
position: 1357099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1369841:1
position: 1369841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1357099-1369841:1:exon

LOC105900239
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105900239
product: beta-1,3-N-acetylglucosaminyltransferase manic fringe
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031562317.2
SIO_010081: LOC105900239
subclass of: SO_0000673
so part of: LOC105900239
location: join(1357099..1358150,1368043..1368088,1368460..1368562,1369429..1369841)
location: region:1357099-1369841:1
so has part: feature:1357099-1358150:1:exon
so has part: feature:1368043-1368088:1:exon
so has part: feature:1368460-1368562:1:exon
so has part: feature:1369429-1369841:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1357099-1358150:1:exon

position:1358150:1
position: 1358150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1368043-1368088:1:exon

position:1368043:1
position: 1368043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1368088:1
position: 1368088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1368460-1368562:1:exon

position:1368460:1
position: 1368460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1368562:1
position: 1368562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1369429-1369841:1:exon

position:1369429:1
position: 1369429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105900239
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105900239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,3-N-acetylglucosaminyltransferase manic fringe
translation: MATATKRIIKKLLRTLSGVLLTFFIVVLVDLQLRTRHSLTPFAAGPGERSSQAVNSLSKDRNVLSKSSDRGQSDNIHQDGSRRKNKDREFSPAPWPRLQPQDVFIAVKTTGRFHRTRLDLLLETWISITKEHTYIFTDTPDEDIASKGHNLILTNCPPEHSHQALSCKMAAEYDHFMASDKRWLCHVDDDNYLNPGALLSLLSAFPLDSDIYVGKPSLDRPMKAHELLEGNKTVSVPTVPQCNAKAPPLSIRALWLSLVSCLAF
SIO_010081: LOC105900239
subclass of: SO_0000673
so part of: LOC105900239
location: join(1357755..1358150,1368043..1368088,1368460..1368562,1369429..1369678)
location: region:1357755-1369678:1
so has part: feature:1357755-1358150:1:exon
so has part: feature:1368043-1368088:1:exon
so has part: feature:1368460-1368562:1:exon
so has part: feature:1369429-1369678:1:exon

XP_031418177.1
type: Protein
SIO_000068: ncbiprotein

position:1357755:1
position: 1357755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1369678:1
position: 1369678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1357755-1358150:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1368043-1368088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368460-1368562:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1369429-1369678:1:exon

LOC116219376
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116219376
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1372968..1377463
location: region:1372968-1377463:1
so has part: feature:1372968-1377463:1:exon
subclass of: SO_0000010

116219376
type: Gene
SIO_000068: ncbigene

position:1372968:1
position: 1372968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1377463:1
position: 1377463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1372968-1377463:1:exon

LOC116219376
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC116219376
product: tripartite motif-containing protein 14-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_042703641.1
SIO_010081: LOC116219376
subclass of: SO_0000673
so part of: LOC116219376
location: join(1372968..1373619,1373770..1373823,1374407..1374487,1376273..1377463)
location: region:1372968-1377463:1
so has part: feature:1372968-1373619:1:exon
so has part: feature:1373770-1373823:1:exon
so has part: feature:1374407-1374487:1:exon
so has part: feature:1376273-1377463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1372968-1373619:1:exon

position:1373619:1
position: 1373619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1373770-1373823:1:exon

position:1373770:1
position: 1373770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373823:1
position: 1373823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1374407-1374487:1:exon

position:1374407:1
position: 1374407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1374487:1
position: 1374487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1376273-1377463:1:exon

position:1376273:1
position: 1376273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116219376
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC116219376
product: tripartite motif-containing protein 14-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_042703642.1
SIO_010081: LOC116219376
subclass of: SO_0000673
so part of: LOC116219376
location: join(1372968..1373619,1374407..1374487,1376273..1377463)
location: region:1372968-1377463:1
so has part: feature:1372968-1373619:1:exon
so has part: feature:1374407-1374487:1:exon
so has part: feature:1376273-1377463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1372968-1373619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1374407-1374487:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376273-1377463:1:exon

LOC116219376
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC116219376
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 14-like
translation: MRSTFLRYACRLTLDPDTAHPTLFLMDGPQGAHCGEEPQAYPLHPLRFDSVAQVLCKEGQFGGASYWEVEWQGGGWVDVGVTYRAVGRKGGGKPCLLGRNDNSWRLRCTHAGYAAWHDNRKITVAAEPSPRIGVFLDRHKGELSFYRLANTVELLHMFRCPFSQPLYPAFRLDLDSTLLICPLERGNGDSSTT
SIO_010081: LOC116219376
subclass of: SO_0000673
so part of: LOC116219376
location: join(1374466..1374487,1376273..1376832)
location: region:1374466-1376832:1
so has part: feature:1374466-1374487:1:exon
so has part: feature:1376273-1376832:1:exon

XP_042559575.1
type: Protein
SIO_000068: ncbiprotein

position:1374466:1
position: 1374466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376832:1
position: 1376832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1374466-1374487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1376273-1376832:1:exon

LOC116219376
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC116219376
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 14-like
translation: MRSTFLRYACRLTLDPDTAHPTLFLMDGPQGAHCGEEPQAYPLHPLRFDSVAQVLCKEGQFGGASYWEVEWQGGGWVDVGVTYRAVGRKGGGKPCLLGRNDNSWRLRCTHAGYAAWHDNRKITVAAEPSPRIGVFLDRHKGELSFYRLANTVELLHMFRCPFSQPLYPAFRLDLDSTLLICPLERGNGDSSTT
SIO_010081: LOC116219376
subclass of: SO_0000673
so part of: LOC116219376
location: join(1374466..1374487,1376273..1376832)
location: region:1374466-1376832:1
so has part: feature:1374466-1374487:1:exon
so has part: feature:1376273-1376832:1:exon

XP_042559576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1374466-1374487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1376273-1376832:1:exon

LOC116219159
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC116219159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1378954..1392795
location: region:1378954-1392795:1
so has part: feature:1378954-1392795:1:exon

116219159
type: Gene
SIO_000068: ncbigene

position:1378954:1
position: 1378954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1392795:1
position: 1392795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378954-1392795:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1378954..1379094
location: region:1378954-1379094:1
so has part: feature:1378954-1379094:1:exon

position:1379094:1
position: 1379094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378954-1379094:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1379346..1379448
location: region:1379346-1379448:1
so has part: feature:1379346-1379448:1:exon

position:1379346:1
position: 1379346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1379448:1
position: 1379448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1379346-1379448:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1380028..1380199
location: region:1380028-1380199:1
so has part: feature:1380028-1380199:1:exon

position:1380028:1
position: 1380028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1380199:1
position: 1380199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1380028-1380199:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1380668..1380863
location: region:1380668-1380863:1
so has part: feature:1380668-1380863:1:exon

position:1380668:1
position: 1380668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1380863:1
position: 1380863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1380668-1380863:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1381189..1381320
location: region:1381189-1381320:1
so has part: feature:1381189-1381320:1:exon

position:1381189:1
position: 1381189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1381320:1
position: 1381320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1381189-1381320:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1382010..1382155
location: region:1382010-1382155:1
so has part: feature:1382010-1382155:1:exon

position:1382010:1
position: 1382010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382155:1
position: 1382155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382010-1382155:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1382406..1382605
location: region:1382406-1382605:1
so has part: feature:1382406-1382605:1:exon

position:1382406:1
position: 1382406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382605:1
position: 1382605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382406-1382605:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1383329..1383449
location: region:1383329-1383449:1
so has part: feature:1383329-1383449:1:exon

position:1383329:1
position: 1383329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383449:1
position: 1383449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383329-1383449:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1384401..1384485
location: region:1384401-1384485:1
so has part: feature:1384401-1384485:1:exon

position:1384401:1
position: 1384401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384485:1
position: 1384485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1384401-1384485:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1384829..1384941
location: region:1384829-1384941:1
so has part: feature:1384829-1384941:1:exon

position:1384829:1
position: 1384829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384941:1
position: 1384941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1384829-1384941:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1385343..1385450
location: region:1385343-1385450:1
so has part: feature:1385343-1385450:1:exon

position:1385343:1
position: 1385343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385450:1
position: 1385450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1385343-1385450:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1385616..1385732
location: region:1385616-1385732:1
so has part: feature:1385616-1385732:1:exon

position:1385616:1
position: 1385616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385732:1
position: 1385732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1385616-1385732:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1386040..1386222
location: region:1386040-1386222:1
so has part: feature:1386040-1386222:1:exon

position:1386040:1
position: 1386040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386222:1
position: 1386222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1386040-1386222:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1386612..1386709
location: region:1386612-1386709:1
so has part: feature:1386612-1386709:1:exon

position:1386612:1
position: 1386612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386709:1
position: 1386709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1386612-1386709:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1388097..1388217
location: region:1388097-1388217:1
so has part: feature:1388097-1388217:1:exon

position:1388097:1
position: 1388097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1388217:1
position: 1388217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1388097-1388217:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1388376..1388494
location: region:1388376-1388494:1
so has part: feature:1388376-1388494:1:exon

position:1388376:1
position: 1388376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1388494:1
position: 1388494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1388376-1388494:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1388664..1388765
location: region:1388664-1388765:1
so has part: feature:1388664-1388765:1:exon

position:1388664:1
position: 1388664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1388765:1
position: 1388765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1388664-1388765:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1389008..1389095
location: region:1389008-1389095:1
so has part: feature:1389008-1389095:1:exon

position:1389008:1
position: 1389008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1389095:1
position: 1389095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389008-1389095:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1389743..1389823
location: region:1389743-1389823:1
so has part: feature:1389743-1389823:1:exon

position:1389743:1
position: 1389743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1389823:1
position: 1389823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389743-1389823:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1390182..1390406
location: region:1390182-1390406:1
so has part: feature:1390182-1390406:1:exon

position:1390182:1
position: 1390182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390406:1
position: 1390406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1390182-1390406:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1390914..1391063
location: region:1390914-1391063:1
so has part: feature:1390914-1391063:1:exon

position:1390914:1
position: 1390914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1391063:1
position: 1391063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1390914-1391063:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1391515..1391617
location: region:1391515-1391617:1
so has part: feature:1391515-1391617:1:exon

position:1391515:1
position: 1391515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1391617:1
position: 1391617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1391515-1391617:1:exon

LOC116219159
type: Exon
subclass of: SO_0000147
RO_0002162: 7950
gene: LOC116219159
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC116219159
subclass of: SO_0000673
so part of: LOC116219159
location: 1392100..1392795
location: region:1392100-1392795:1
so has part: feature:1392100-1392795:1:exon

position:1392100:1
position: 1392100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1392100-1392795:1:exon

trmt1
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: trmt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1393732..1407385)
location: region:1393732-1407385:-1
so has part: feature:1393732-1407385:-1:exon
subclass of: SO_0000010

105900260
type: Gene
SIO_000068: ncbigene

position:1393732:-1
position: 1393732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1407385:-1
position: 1407385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1393732-1407385:-1:exon

trmt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: trmt1
product: tRNA methyltransferase 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031561930.2
SIO_010081: trmt1
subclass of: SO_0000673
so part of: trmt1
location: complement(join(1393732..1393876,1394474..1394588,1394700..1394840,1395047..1395123,1395440..1395548,1396752..1396837,1397118..1397252,1398745..1398814,1399008..1399091,1401113..1401261,1401512..1401624,1402140..1402255,1402703..1402890,1403149..1403392,1403527..1403872,1407083..1407385))
location: region:1393732-1407385:-1
so has part: feature:1407083-1407385:-1:exon
so has part: feature:1403527-1403872:-1:exon
so has part: feature:1403149-1403392:-1:exon
so has part: feature:1402703-1402890:-1:exon
so has part: feature:1402140-1402255:-1:exon
so has part: feature:1401512-1401624:-1:exon
so has part: feature:1401113-1401261:-1:exon
so has part: feature:1399008-1399091:-1:exon
so has part: feature:1398745-1398814:-1:exon
so has part: feature:1397118-1397252:-1:exon
so has part: feature:1396752-1396837:-1:exon
so has part: feature:1395440-1395548:-1:exon
so has part: feature:1395047-1395123:-1:exon
so has part: feature:1394700-1394840:-1:exon
so has part: feature:1394474-1394588:-1:exon
so has part: feature:1393732-1393876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1407083-1407385:-1:exon

position:1407083:-1
position: 1407083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1403527-1403872:-1:exon

position:1403527:-1
position: 1403527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1403872:-1
position: 1403872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1403149-1403392:-1:exon

position:1403149:-1
position: 1403149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1403392:-1
position: 1403392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1402703-1402890:-1:exon

position:1402703:-1
position: 1402703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1402890:-1
position: 1402890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1402140-1402255:-1:exon

position:1402140:-1
position: 1402140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1402255:-1
position: 1402255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1401512-1401624:-1:exon

position:1401512:-1
position: 1401512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1401624:-1
position: 1401624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1401113-1401261:-1:exon

position:1401113:-1
position: 1401113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1401261:-1
position: 1401261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1399008-1399091:-1:exon

position:1399008:-1
position: 1399008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1399091:-1
position: 1399091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1398745-1398814:-1:exon

position:1398745:-1
position: 1398745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398814:-1
position: 1398814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1397118-1397252:-1:exon

position:1397118:-1
position: 1397118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1397252:-1
position: 1397252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1396752-1396837:-1:exon

position:1396752:-1
position: 1396752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1396837:-1
position: 1396837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1395440-1395548:-1:exon

position:1395440:-1
position: 1395440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1395548:-1
position: 1395548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1395047-1395123:-1:exon

position:1395047:-1
position: 1395047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1395123:-1
position: 1395123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1394700-1394840:-1:exon

position:1394700:-1
position: 1394700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394840:-1
position: 1394840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1394474-1394588:-1:exon

position:1394474:-1
position: 1394474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394588:-1
position: 1394588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1393732-1393876:-1:exon

position:1393876:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

trmt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: trmt1
product: tRNA methyltransferase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031561929.2
SIO_010081: trmt1
subclass of: SO_0000673
so part of: trmt1
location: complement(join(1393732..1393876,1394474..1394588,1394700..1394840,1395047..1395123,1395440..1395548,1396752..1396837,1397118..1397252,1398745..1398814,1399008..1399091,1401113..1401261,1401512..1401624,1402140..1402255,1402703..1402890,1403149..1403392,1403527..1403872,1405293..1405382))
location: region:1393732-1405382:-1
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position:1405382:-1
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reference: sequence
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urn:…
SIO_000300: 1
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position:1405293:-1
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reference: sequence
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urn:…
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urn:…
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SIO_000628: feature:1393732-1393876:-1:exon

trmt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: trmt1
product: tRNA methyltransferase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031561926.2
SIO_010081: trmt1
subclass of: SO_0000673
so part of: trmt1
location: complement(join(1393732..1393876,1394474..1394588,1394700..1394840,1395047..1395123,1395440..1395548,1396752..1396837,1397118..1397252,1398745..1398814,1399008..1399091,1401113..1401261,1401512..1401624,1402140..1402255,1402703..1402890,1403149..1403392,1403527..1403872,1404316..1405094))
location: region:1393732-1405094:-1
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position:1405094:-1
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reference: sequence
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urn:…
SIO_000300: 1
SIO_000628: feature:1404316-1405094:-1:exon

position:1404316:-1
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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:1403527-1403872:-1:exon

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urn:…
SIO_000300: 16
SIO_000628: feature:1393732-1393876:-1:exon

trmt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: trmt1
product: tRNA methyltransferase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031561927.2
SIO_010081: trmt1
subclass of: SO_0000673
so part of: trmt1
location: complement(join(1393732..1393876,1394474..1394588,1394700..1394840,1395047..1395123,1395440..1395548,1396752..1396837,1397118..1397252,1398745..1398814,1399008..1399091,1401113..1401261,1401512..1401624,1402140..1402255,1402703..1402890,1403149..1403392,1403527..1403885,1404316..1405094))
location: region:1393732-1405094:-1
so has part: feature:1404316-1405094:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:1404316-1405094:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1403527-1403885:-1:exon

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reference: sequence
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urn:…
SIO_000300: 3
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urn:…
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SIO_000628: feature:1393732-1393876:-1:exon

trmt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: trmt1
product: tRNA methyltransferase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031561928.2
SIO_010081: trmt1
subclass of: SO_0000673
so part of: trmt1
location: complement(join(1393732..1393876,1394474..1394588,1394700..1394840,1395047..1395123,1395440..1395548,1396752..1396837,1397118..1397252,1398745..1398814,1399008..1399091,1401113..1401261,1401512..1401624,1402140..1402255,1402703..1402890,1403149..1403392,1403527..1403872,1404024..1404081,1404316..1405094))
location: region:1393732-1405094:-1
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urn:…
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SIO_000628: feature:1404316-1405094:-1:exon

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SIO_000300: 2
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reference: sequence
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urn:…
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SIO_000628: feature:1403527-1403872:-1:exon

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SIO_000300: 4
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urn:…
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SIO_000628: feature:1393732-1393876:-1:exon

trmt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: trmt1
product: tRNA methyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031561924.2
SIO_010081: trmt1
subclass of: SO_0000673
so part of: trmt1
location: complement(join(1393732..1393876,1394474..1394588,1394721..1394840,1395047..1395123,1395440..1395548,1396752..1396837,1397118..1397252,1398745..1398814,1399008..1399091,1401113..1401261,1401512..1401624,1402140..1402255,1402703..1402890,1403149..1403392,1403527..1403885,1404024..1404081,1404316..1405094))
location: region:1393732-1405094:-1
so has part: feature:1404316-1405094:-1:exon
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urn:…
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SIO_000300: 2
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SIO_000300: 15
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urn:…
SIO_000300: 16
SIO_000628: feature:1394474-1394588:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1393732-1393876:-1:exon

trmt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: trmt1
product: tRNA methyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031561923.2
SIO_010081: trmt1
subclass of: SO_0000673
so part of: trmt1
location: complement(join(1393732..1393876,1394474..1394588,1394700..1394840,1395047..1395123,1395440..1395548,1396752..1396837,1397118..1397252,1398745..1398814,1399008..1399091,1401113..1401261,1401512..1401624,1402140..1402255,1402703..1402890,1403149..1403392,1403527..1403885,1404024..1404081,1404316..1405094))
location: region:1393732-1405094:-1
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urn:…
SIO_000300: 1
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SIO_000628: feature:1396752-1396837:-1:exon

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urn:…
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SIO_000628: feature:1393732-1393876:-1:exon

trmt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: trmt1
product: tRNA methyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031561925.2
SIO_010081: trmt1
subclass of: SO_0000673
so part of: trmt1
location: complement(join(1393732..1393876,1394474..1394588,1394700..1394840,1395047..1395123,1395440..1395548,1396752..1396837,1397118..1397252,1398745..1398814,1399008..1399091,1401113..1401261,1401512..1401624,1402140..1402255,1402703..1402890,1403149..1403392,1403527..1403872,1403954..1403990))
location: region:1393732-1403990:-1
so has part: feature:1403954-1403990:-1:exon
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so has part: feature:1399008-1399091:-1:exon
so has part: feature:1398745-1398814:-1:exon
so has part: feature:1397118-1397252:-1:exon
so has part: feature:1396752-1396837:-1:exon
so has part: feature:1395440-1395548:-1:exon
so has part: feature:1395047-1395123:-1:exon
so has part: feature:1394700-1394840:-1:exon
so has part: feature:1394474-1394588:-1:exon
so has part: feature:1393732-1393876:-1:exon

position:1403990:-1
position: 1403990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1403954-1403990:-1:exon

position:1403954:-1
position: 1403954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1403527-1403872:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1403149-1403392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1402703-1402890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1402140-1402255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1401512-1401624:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1401113-1401261:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1399008-1399091:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1398745-1398814:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1397118-1397252:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1396752-1396837:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1395440-1395548:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1395047-1395123:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1394700-1394840:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1394474-1394588:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1393732-1393876:-1:exon

trmt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: trmt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X2
translation: MTTSGYATRRFEVAFGSEVLCAGQEQGVPCMLPKAAQLLCLTAVRVSLQDLRKVSFRGLRTIELLRTPQSNTTADGAGALMDVVTTTTSSGNGNQTCTPETELLPGETEVREGKAAICFPSANEVFYNPVQEFNRDLTCAVITEYARERLAQRGVRIVVPGEKERVVVCLSEDNESSETQKTTEQQQQGKEGENETEKGGDKKEEEESFVTASVGERCEKGLRVLEGLAASGLRSVRFALEVPGLLNVTANDFSAKAAALIARNVRHNGVAHLVQASQRDASMVMYEARGKKERFDVIDLDPYGSPSSFLDAAVQAVGEGGLLCITCTDMAVMAGNSGETCYSKYGSVSIKARFCHEMALRVILHSLDQRANVYQRYIEPLLSASVDFYIRVFVRVRTGQATVKNSASKQALVYNCVGCGAFHLQRMGKRMSHGKNMKYSAAIGPPVGTSCEHCGQRHQLGGPIWADPIHDIEFVQKVLSAVSTNPSRFGTSKRIEGMLSMMTEELPDVPLYYALDHLCSTVHCNTPAMLQFRSALLHAGYRVSMSHASRNGLKTDAPPGVIWDLLRCWEKANPVKRERLSETSPAFRILSTEPTLQACFDVREDANPQSRKRHLVRFQENPQANWGPKARAKDSGGISSELEDKRKLCQNKRKNQVTDASQLKNFPCKRFRKGTCTHGDKCCYSHESASDEADKME
SIO_010081: trmt1
subclass of: SO_0000673
so part of: trmt1
location: complement(join(1393802..1393876,1394474..1394588,1394721..1394840,1395047..1395123,1395440..1395548,1396752..1396837,1397118..1397252,1398745..1398814,1399008..1399091,1401113..1401261,1401512..1401624,1402140..1402255,1402703..1402890,1403149..1403392,1403527..1403885,1404024..1404077))
location: region:1393802-1404077:-1
so has part: feature:1404024-1404077:-1:exon
so has part: feature:1403527-1403885:-1:exon
so has part: feature:1403149-1403392:-1:exon
so has part: feature:1402703-1402890:-1:exon
so has part: feature:1402140-1402255:-1:exon
so has part: feature:1401512-1401624:-1:exon
so has part: feature:1401113-1401261:-1:exon
so has part: feature:1399008-1399091:-1:exon
so has part: feature:1398745-1398814:-1:exon
so has part: feature:1397118-1397252:-1:exon
so has part: feature:1396752-1396837:-1:exon
so has part: feature:1395440-1395548:-1:exon
so has part: feature:1395047-1395123:-1:exon
so has part: feature:1394721-1394840:-1:exon
so has part: feature:1394474-1394588:-1:exon
so has part: feature:1393802-1393876:-1:exon

XP_031417784.1
type: Protein
SIO_000068: ncbiprotein

position:1393802:-1
position: 1393802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404077:-1
position: 1404077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1404024-1404077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1403527-1403885:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1403149-1403392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1402703-1402890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1402140-1402255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1401512-1401624:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1401113-1401261:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1399008-1399091:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1398745-1398814:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1397118-1397252:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1396752-1396837:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1395440-1395548:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1395047-1395123:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1394721-1394840:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1394474-1394588:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1393802-1393876:-1:exon

trmt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: trmt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X1
translation: MTTSGYATRRFEVAFGSEVLCAGQEQGVPCMLPKAAQLLCLTAVRVSLQDLRKVSFRGLRTIELLRTPQSNTTADGAGALMDVVTTTTSSGNGNQTCTPETELLPGETEVREGKAAICFPSANEVFYNPVQEFNRDLTCAVITEYARERLAQRGVRIVVPGEKERVVVCLSEDNESSETQKTTEQQQQGKEGENETEKGGDKKEEEESFVTASVGERCEKGLRVLEGLAASGLRSVRFALEVPGLLNVTANDFSAKAAALIARNVRHNGVAHLVQASQRDASMVMYEARGKKERFDVIDLDPYGSPSSFLDAAVQAVGEGGLLCITCTDMAVMAGNSGETCYSKYGSVSIKARFCHEMALRVILHSLDQRANVYQRYIEPLLSASVDFYIRVFVRVRTGQATVKNSASKQALVYNCVGCGAFHLQRMGKRMSHGKNMKYSAAIGPPVGTSCEHCGQRHQLGGPIWADPIHDIEFVQKVLSAVSTNPSRFGTSKRIEGMLSMMTEELPDVPLYYALDHLCSTVHCNTPAMLQFRSALLHAGYRVSMSHASRNGLKTDAPPGVIWDLLRCWEKANPVKRERLSETSPAFRILSTEPTLQACFDVREDANPQSRKRHLVRFQENPQANWGPKARAKDRWATHSTHGGISSELEDKRKLCQNKRKNQVTDASQLKNFPCKRFRKGTCTHGDKCCYSHESASDEADKME
SIO_010081: trmt1
subclass of: SO_0000673
so part of: trmt1
location: complement(join(1393802..1393876,1394474..1394588,1394700..1394840,1395047..1395123,1395440..1395548,1396752..1396837,1397118..1397252,1398745..1398814,1399008..1399091,1401113..1401261,1401512..1401624,1402140..1402255,1402703..1402890,1403149..1403392,1403527..1403885,1404024..1404077))
location: region:1393802-1404077:-1
so has part: feature:1404024-1404077:-1:exon
so has part: feature:1403527-1403885:-1:exon
so has part: feature:1403149-1403392:-1:exon
so has part: feature:1402703-1402890:-1:exon
so has part: feature:1402140-1402255:-1:exon
so has part: feature:1401512-1401624:-1:exon
so has part: feature:1401113-1401261:-1:exon
so has part: feature:1399008-1399091:-1:exon
so has part: feature:1398745-1398814:-1:exon
so has part: feature:1397118-1397252:-1:exon
so has part: feature:1396752-1396837:-1:exon
so has part: feature:1395440-1395548:-1:exon
so has part: feature:1395047-1395123:-1:exon
so has part: feature:1394700-1394840:-1:exon
so has part: feature:1394474-1394588:-1:exon
so has part: feature:1393802-1393876:-1:exon

XP_031417783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1404024-1404077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1403527-1403885:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1403149-1403392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1402703-1402890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1402140-1402255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1401512-1401624:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1401113-1401261:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1399008-1399091:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1398745-1398814:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1397118-1397252:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1396752-1396837:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1395440-1395548:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1395047-1395123:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1394700-1394840:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1394474-1394588:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1393802-1393876:-1:exon

trmt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: trmt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X3
translation: MKRDSHERQEQGVPCMLPKAAQLLCLTAVRVSLQDLRKVSFRGLRTIELLRTPQSNTTADGAGALMDVVTTTTSSGNGNQTCTPETELLPGETEVREGKAAICFPSANEVFYNPVQEFNRDLTCAVITEYARERLAQRGVRIVVPGEKERVVVCLSEDNESSETQKTTEQQQQGKEGENETEKGGDKKEEEESFVTASVGERCEKGLRVLEGLAASGLRSVRFALEVPGLLNVTANDFSAKAAALIARNVRHNGVAHLVQASQRDASMVMYEARGKKERFDVIDLDPYGSPSSFLDAAVQAVGEGGLLCITCTDMAVMAGNSGETCYSKYGSVSIKARFCHEMALRVILHSLDQRANVYQRYIEPLLSASVDFYIRVFVRVRTGQATVKNSASKQALVYNCVGCGAFHLQRMGKRMSHGKNMKYSAAIGPPVGTSCEHCGQRHQLGGPIWADPIHDIEFVQKVLSAVSTNPSRFGTSKRIEGMLSMMTEELPDVPLYYALDHLCSTVHCNTPAMLQFRSALLHAGYRVSMSHASRNGLKTDAPPGVIWDLLRCWEKANPVKRERLSETSPAFRILSTEPTLQACFDVREDANPQSRKRHLVRFQENPQANWGPKARAKDRWATHSTHGGISSELEDKRKLCQNKRKNQVTDASQLKNFPCKRFRKGTCTHGDKCCYSHESASDEADKME
SIO_010081: trmt1
subclass of: SO_0000673
so part of: trmt1
location: complement(join(1393802..1393876,1394474..1394588,1394700..1394840,1395047..1395123,1395440..1395548,1396752..1396837,1397118..1397252,1398745..1398814,1399008..1399091,1401113..1401261,1401512..1401624,1402140..1402255,1402703..1402890,1403149..1403392,1403527..1403872,1403954..1403975))
location: region:1393802-1403975:-1
so has part: feature:1403954-1403975:-1:exon
so has part: feature:1403527-1403872:-1:exon
so has part: feature:1403149-1403392:-1:exon
so has part: feature:1402703-1402890:-1:exon
so has part: feature:1402140-1402255:-1:exon
so has part: feature:1401512-1401624:-1:exon
so has part: feature:1401113-1401261:-1:exon
so has part: feature:1399008-1399091:-1:exon
so has part: feature:1398745-1398814:-1:exon
so has part: feature:1397118-1397252:-1:exon
so has part: feature:1396752-1396837:-1:exon
so has part: feature:1395440-1395548:-1:exon
so has part: feature:1395047-1395123:-1:exon
so has part: feature:1394700-1394840:-1:exon
so has part: feature:1394474-1394588:-1:exon
so has part: feature:1393802-1393876:-1:exon

XP_031417785.1
type: Protein
SIO_000068: ncbiprotein

position:1403975:-1
position: 1403975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1403954-1403975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1403527-1403872:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1403149-1403392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1402703-1402890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1402140-1402255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1401512-1401624:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1401113-1401261:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1399008-1399091:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1398745-1398814:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1397118-1397252:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1396752-1396837:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1395440-1395548:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1395047-1395123:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1394700-1394840:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1394474-1394588:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1393802-1393876:-1:exon

trmt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: trmt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X4
translation: MLPKAAQLLCLTAVRVSLQDLRKVSFRGLRTIELLRTPQSNTTADGAGALMDVVTTTTSSGNGNQTCTPETELLPGETEVREGKAAICFPSANEVFYNPVQEFNRDLTCAVITEYARERLAQRGVRIVVPGEKERVVVCLSEDNESSETQKTTEQQQQGKEGENETEKGGDKKEEEESFVTASVGERCEKGLRVLEGLAASGLRSVRFALEVPGLLNVTANDFSAKAAALIARNVRHNGVAHLVQASQRDASMVMYEARGKKERFDVIDLDPYGSPSSFLDAAVQAVGEGGLLCITCTDMAVMAGNSGETCYSKYGSVSIKARFCHEMALRVILHSLDQRANVYQRYIEPLLSASVDFYIRVFVRVRTGQATVKNSASKQALVYNCVGCGAFHLQRMGKRMSHGKNMKYSAAIGPPVGTSCEHCGQRHQLGGPIWADPIHDIEFVQKVLSAVSTNPSRFGTSKRIEGMLSMMTEELPDVPLYYALDHLCSTVHCNTPAMLQFRSALLHAGYRVSMSHASRNGLKTDAPPGVIWDLLRCWEKANPVKRERLSETSPAFRILSTEPTLQACFDVREDANPQSRKRHLVRFQENPQANWGPKARAKDRWATHSTHGGISSELEDKRKLCQNKRKNQVTDASQLKNFPCKRFRKGTCTHGDKCCYSHESASDEADKME
SIO_010081: trmt1
subclass of: SO_0000673
so part of: trmt1
location: complement(join(1393802..1393876,1394474..1394588,1394700..1394840,1395047..1395123,1395440..1395548,1396752..1396837,1397118..1397252,1398745..1398814,1399008..1399091,1401113..1401261,1401512..1401624,1402140..1402255,1402703..1402890,1403149..1403392,1403527..1403849))
location: region:1393802-1403849:-1
so has part: feature:1403527-1403849:-1:exon
so has part: feature:1403149-1403392:-1:exon
so has part: feature:1402703-1402890:-1:exon
so has part: feature:1402140-1402255:-1:exon
so has part: feature:1401512-1401624:-1:exon
so has part: feature:1401113-1401261:-1:exon
so has part: feature:1399008-1399091:-1:exon
so has part: feature:1398745-1398814:-1:exon
so has part: feature:1397118-1397252:-1:exon
so has part: feature:1396752-1396837:-1:exon
so has part: feature:1395440-1395548:-1:exon
so has part: feature:1395047-1395123:-1:exon
so has part: feature:1394700-1394840:-1:exon
so has part: feature:1394474-1394588:-1:exon
so has part: feature:1393802-1393876:-1:exon

XP_031417786.1
type: Protein
SIO_000068: ncbiprotein

position:1403849:-1
position: 1403849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1403527-1403849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1403149-1403392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1402703-1402890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1402140-1402255:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1401512-1401624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1401113-1401261:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399008-1399091:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1398745-1398814:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1397118-1397252:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1396752-1396837:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1395440-1395548:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1395047-1395123:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1394700-1394840:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1394474-1394588:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1393802-1393876:-1:exon

trmt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: trmt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X4
translation: MLPKAAQLLCLTAVRVSLQDLRKVSFRGLRTIELLRTPQSNTTADGAGALMDVVTTTTSSGNGNQTCTPETELLPGETEVREGKAAICFPSANEVFYNPVQEFNRDLTCAVITEYARERLAQRGVRIVVPGEKERVVVCLSEDNESSETQKTTEQQQQGKEGENETEKGGDKKEEEESFVTASVGERCEKGLRVLEGLAASGLRSVRFALEVPGLLNVTANDFSAKAAALIARNVRHNGVAHLVQASQRDASMVMYEARGKKERFDVIDLDPYGSPSSFLDAAVQAVGEGGLLCITCTDMAVMAGNSGETCYSKYGSVSIKARFCHEMALRVILHSLDQRANVYQRYIEPLLSASVDFYIRVFVRVRTGQATVKNSASKQALVYNCVGCGAFHLQRMGKRMSHGKNMKYSAAIGPPVGTSCEHCGQRHQLGGPIWADPIHDIEFVQKVLSAVSTNPSRFGTSKRIEGMLSMMTEELPDVPLYYALDHLCSTVHCNTPAMLQFRSALLHAGYRVSMSHASRNGLKTDAPPGVIWDLLRCWEKANPVKRERLSETSPAFRILSTEPTLQACFDVREDANPQSRKRHLVRFQENPQANWGPKARAKDRWATHSTHGGISSELEDKRKLCQNKRKNQVTDASQLKNFPCKRFRKGTCTHGDKCCYSHESASDEADKME
SIO_010081: trmt1
subclass of: SO_0000673
so part of: trmt1
location: complement(join(1393802..1393876,1394474..1394588,1394700..1394840,1395047..1395123,1395440..1395548,1396752..1396837,1397118..1397252,1398745..1398814,1399008..1399091,1401113..1401261,1401512..1401624,1402140..1402255,1402703..1402890,1403149..1403392,1403527..1403849))
location: region:1393802-1403849:-1
so has part: feature:1403527-1403849:-1:exon
so has part: feature:1403149-1403392:-1:exon
so has part: feature:1402703-1402890:-1:exon
so has part: feature:1402140-1402255:-1:exon
so has part: feature:1401512-1401624:-1:exon
so has part: feature:1401113-1401261:-1:exon
so has part: feature:1399008-1399091:-1:exon
so has part: feature:1398745-1398814:-1:exon
so has part: feature:1397118-1397252:-1:exon
so has part: feature:1396752-1396837:-1:exon
so has part: feature:1395440-1395548:-1:exon
so has part: feature:1395047-1395123:-1:exon
so has part: feature:1394700-1394840:-1:exon
so has part: feature:1394474-1394588:-1:exon
so has part: feature:1393802-1393876:-1:exon

XP_031417787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1403527-1403849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1403149-1403392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1402703-1402890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1402140-1402255:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1401512-1401624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1401113-1401261:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399008-1399091:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1398745-1398814:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1397118-1397252:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1396752-1396837:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1395440-1395548:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1395047-1395123:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1394700-1394840:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1394474-1394588:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1393802-1393876:-1:exon

trmt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: trmt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X4
translation: MLPKAAQLLCLTAVRVSLQDLRKVSFRGLRTIELLRTPQSNTTADGAGALMDVVTTTTSSGNGNQTCTPETELLPGETEVREGKAAICFPSANEVFYNPVQEFNRDLTCAVITEYARERLAQRGVRIVVPGEKERVVVCLSEDNESSETQKTTEQQQQGKEGENETEKGGDKKEEEESFVTASVGERCEKGLRVLEGLAASGLRSVRFALEVPGLLNVTANDFSAKAAALIARNVRHNGVAHLVQASQRDASMVMYEARGKKERFDVIDLDPYGSPSSFLDAAVQAVGEGGLLCITCTDMAVMAGNSGETCYSKYGSVSIKARFCHEMALRVILHSLDQRANVYQRYIEPLLSASVDFYIRVFVRVRTGQATVKNSASKQALVYNCVGCGAFHLQRMGKRMSHGKNMKYSAAIGPPVGTSCEHCGQRHQLGGPIWADPIHDIEFVQKVLSAVSTNPSRFGTSKRIEGMLSMMTEELPDVPLYYALDHLCSTVHCNTPAMLQFRSALLHAGYRVSMSHASRNGLKTDAPPGVIWDLLRCWEKANPVKRERLSETSPAFRILSTEPTLQACFDVREDANPQSRKRHLVRFQENPQANWGPKARAKDRWATHSTHGGISSELEDKRKLCQNKRKNQVTDASQLKNFPCKRFRKGTCTHGDKCCYSHESASDEADKME
SIO_010081: trmt1
subclass of: SO_0000673
so part of: trmt1
location: complement(join(1393802..1393876,1394474..1394588,1394700..1394840,1395047..1395123,1395440..1395548,1396752..1396837,1397118..1397252,1398745..1398814,1399008..1399091,1401113..1401261,1401512..1401624,1402140..1402255,1402703..1402890,1403149..1403392,1403527..1403849))
location: region:1393802-1403849:-1
so has part: feature:1403527-1403849:-1:exon
so has part: feature:1403149-1403392:-1:exon
so has part: feature:1402703-1402890:-1:exon
so has part: feature:1402140-1402255:-1:exon
so has part: feature:1401512-1401624:-1:exon
so has part: feature:1401113-1401261:-1:exon
so has part: feature:1399008-1399091:-1:exon
so has part: feature:1398745-1398814:-1:exon
so has part: feature:1397118-1397252:-1:exon
so has part: feature:1396752-1396837:-1:exon
so has part: feature:1395440-1395548:-1:exon
so has part: feature:1395047-1395123:-1:exon
so has part: feature:1394700-1394840:-1:exon
so has part: feature:1394474-1394588:-1:exon
so has part: feature:1393802-1393876:-1:exon

XP_031417788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1403527-1403849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1403149-1403392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1402703-1402890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1402140-1402255:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1401512-1401624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1401113-1401261:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399008-1399091:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1398745-1398814:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1397118-1397252:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1396752-1396837:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1395440-1395548:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1395047-1395123:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1394700-1394840:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1394474-1394588:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1393802-1393876:-1:exon

trmt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: trmt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X4
translation: MLPKAAQLLCLTAVRVSLQDLRKVSFRGLRTIELLRTPQSNTTADGAGALMDVVTTTTSSGNGNQTCTPETELLPGETEVREGKAAICFPSANEVFYNPVQEFNRDLTCAVITEYARERLAQRGVRIVVPGEKERVVVCLSEDNESSETQKTTEQQQQGKEGENETEKGGDKKEEEESFVTASVGERCEKGLRVLEGLAASGLRSVRFALEVPGLLNVTANDFSAKAAALIARNVRHNGVAHLVQASQRDASMVMYEARGKKERFDVIDLDPYGSPSSFLDAAVQAVGEGGLLCITCTDMAVMAGNSGETCYSKYGSVSIKARFCHEMALRVILHSLDQRANVYQRYIEPLLSASVDFYIRVFVRVRTGQATVKNSASKQALVYNCVGCGAFHLQRMGKRMSHGKNMKYSAAIGPPVGTSCEHCGQRHQLGGPIWADPIHDIEFVQKVLSAVSTNPSRFGTSKRIEGMLSMMTEELPDVPLYYALDHLCSTVHCNTPAMLQFRSALLHAGYRVSMSHASRNGLKTDAPPGVIWDLLRCWEKANPVKRERLSETSPAFRILSTEPTLQACFDVREDANPQSRKRHLVRFQENPQANWGPKARAKDRWATHSTHGGISSELEDKRKLCQNKRKNQVTDASQLKNFPCKRFRKGTCTHGDKCCYSHESASDEADKME
SIO_010081: trmt1
subclass of: SO_0000673
so part of: trmt1
location: complement(join(1393802..1393876,1394474..1394588,1394700..1394840,1395047..1395123,1395440..1395548,1396752..1396837,1397118..1397252,1398745..1398814,1399008..1399091,1401113..1401261,1401512..1401624,1402140..1402255,1402703..1402890,1403149..1403392,1403527..1403849))
location: region:1393802-1403849:-1
so has part: feature:1403527-1403849:-1:exon
so has part: feature:1403149-1403392:-1:exon
so has part: feature:1402703-1402890:-1:exon
so has part: feature:1402140-1402255:-1:exon
so has part: feature:1401512-1401624:-1:exon
so has part: feature:1401113-1401261:-1:exon
so has part: feature:1399008-1399091:-1:exon
so has part: feature:1398745-1398814:-1:exon
so has part: feature:1397118-1397252:-1:exon
so has part: feature:1396752-1396837:-1:exon
so has part: feature:1395440-1395548:-1:exon
so has part: feature:1395047-1395123:-1:exon
so has part: feature:1394700-1394840:-1:exon
so has part: feature:1394474-1394588:-1:exon
so has part: feature:1393802-1393876:-1:exon

XP_031417789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1403527-1403849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1403149-1403392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1402703-1402890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1402140-1402255:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1401512-1401624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1401113-1401261:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399008-1399091:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1398745-1398814:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1397118-1397252:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1396752-1396837:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1395440-1395548:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1395047-1395123:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1394700-1394840:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1394474-1394588:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1393802-1393876:-1:exon

trmt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: trmt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X4
translation: MLPKAAQLLCLTAVRVSLQDLRKVSFRGLRTIELLRTPQSNTTADGAGALMDVVTTTTSSGNGNQTCTPETELLPGETEVREGKAAICFPSANEVFYNPVQEFNRDLTCAVITEYARERLAQRGVRIVVPGEKERVVVCLSEDNESSETQKTTEQQQQGKEGENETEKGGDKKEEEESFVTASVGERCEKGLRVLEGLAASGLRSVRFALEVPGLLNVTANDFSAKAAALIARNVRHNGVAHLVQASQRDASMVMYEARGKKERFDVIDLDPYGSPSSFLDAAVQAVGEGGLLCITCTDMAVMAGNSGETCYSKYGSVSIKARFCHEMALRVILHSLDQRANVYQRYIEPLLSASVDFYIRVFVRVRTGQATVKNSASKQALVYNCVGCGAFHLQRMGKRMSHGKNMKYSAAIGPPVGTSCEHCGQRHQLGGPIWADPIHDIEFVQKVLSAVSTNPSRFGTSKRIEGMLSMMTEELPDVPLYYALDHLCSTVHCNTPAMLQFRSALLHAGYRVSMSHASRNGLKTDAPPGVIWDLLRCWEKANPVKRERLSETSPAFRILSTEPTLQACFDVREDANPQSRKRHLVRFQENPQANWGPKARAKDRWATHSTHGGISSELEDKRKLCQNKRKNQVTDASQLKNFPCKRFRKGTCTHGDKCCYSHESASDEADKME
SIO_010081: trmt1
subclass of: SO_0000673
so part of: trmt1
location: complement(join(1393802..1393876,1394474..1394588,1394700..1394840,1395047..1395123,1395440..1395548,1396752..1396837,1397118..1397252,1398745..1398814,1399008..1399091,1401113..1401261,1401512..1401624,1402140..1402255,1402703..1402890,1403149..1403392,1403527..1403849))
location: region:1393802-1403849:-1
so has part: feature:1403527-1403849:-1:exon
so has part: feature:1403149-1403392:-1:exon
so has part: feature:1402703-1402890:-1:exon
so has part: feature:1402140-1402255:-1:exon
so has part: feature:1401512-1401624:-1:exon
so has part: feature:1401113-1401261:-1:exon
so has part: feature:1399008-1399091:-1:exon
so has part: feature:1398745-1398814:-1:exon
so has part: feature:1397118-1397252:-1:exon
so has part: feature:1396752-1396837:-1:exon
so has part: feature:1395440-1395548:-1:exon
so has part: feature:1395047-1395123:-1:exon
so has part: feature:1394700-1394840:-1:exon
so has part: feature:1394474-1394588:-1:exon
so has part: feature:1393802-1393876:-1:exon

XP_031417790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1403527-1403849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1403149-1403392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1402703-1402890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1402140-1402255:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1401512-1401624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1401113-1401261:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399008-1399091:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1398745-1398814:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1397118-1397252:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1396752-1396837:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1395440-1395548:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1395047-1395123:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1394700-1394840:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1394474-1394588:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1393802-1393876:-1:exon

nacc1b
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: nacc1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1405363..1419253
location: region:1405363-1419253:1
so has part: feature:1405363-1419253:1:exon
subclass of: SO_0000010

105900242
type: Gene
SIO_000068: ncbigene

position:1405363:1
position: 1405363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419253:1
position: 1419253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1405363-1419253:1:exon

nacc1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: nacc1b
product: nucleus accumbens associated 1, BEN and BTB (POZ) domain containing b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_031561932.2
SIO_010081: nacc1b
subclass of: SO_0000673
so part of: nacc1b
location: join(1405363..1405490,1409383..1410590,1412789..1413074,1415719..1415816,1417161..1419253)
location: region:1405363-1419253:1
so has part: feature:1405363-1405490:1:exon
so has part: feature:1409383-1410590:1:exon
so has part: feature:1412789-1413074:1:exon
so has part: feature:1415719-1415816:1:exon
so has part: feature:1417161-1419253:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1405363-1405490:1:exon

position:1405490:1
position: 1405490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1409383-1410590:1:exon

position:1409383:1
position: 1409383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1410590:1
position: 1410590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1412789-1413074:1:exon

position:1412789:1
position: 1412789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1413074:1
position: 1413074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1415719-1415816:1:exon

position:1415719:1
position: 1415719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1415816:1
position: 1415816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1417161-1419253:1:exon

position:1417161:1
position: 1417161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nacc1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: nacc1b
product: nucleus accumbens associated 1, BEN and BTB (POZ) domain containing b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031561931.2
SIO_010081: nacc1b
subclass of: SO_0000673
so part of: nacc1b
location: join(1405571..1405681,1409383..1410590,1412789..1413074,1415719..1415816,1417161..1419253)
location: region:1405571-1419253:1
so has part: feature:1405571-1405681:1:exon
so has part: feature:1409383-1410590:1:exon
so has part: feature:1412789-1413074:1:exon
so has part: feature:1415719-1415816:1:exon
so has part: feature:1417161-1419253:1:exon

position:1405571:1
position: 1405571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1405571-1405681:1:exon

position:1405681:1
position: 1405681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1409383-1410590:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1412789-1413074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1415719-1415816:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417161-1419253:1:exon

nacc1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: nacc1b
product: nucleus accumbens associated 1, BEN and BTB (POZ) domain containing b, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031561934.2
SIO_010081: nacc1b
subclass of: SO_0000673
so part of: nacc1b
location: join(1405572..1405681,1409383..1410590,1412792..1413074,1415719..1415816,1417161..1419252)
location: region:1405572-1419252:1
so has part: feature:1405572-1405681:1:exon
so has part: feature:1409383-1410590:1:exon
so has part: feature:1412792-1413074:1:exon
so has part: feature:1415719-1415816:1:exon
so has part: feature:1417161-1419252:1:exon

position:1405572:1
position: 1405572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419252:1
position: 1419252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1405572-1405681:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1409383-1410590:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1412792-1413074:1:exon

position:1412792:1
position: 1412792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1415719-1415816:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417161-1419252:1:exon

nacc1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: nacc1b
product: nucleus accumbens associated 1, BEN and BTB (POZ) domain containing b, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031561933.2
SIO_010081: nacc1b
subclass of: SO_0000673
so part of: nacc1b
location: join(1405869..1406836,1409383..1410590,1412789..1413074,1415719..1415816,1417161..1419253)
location: region:1405869-1419253:1
so has part: feature:1405869-1406836:1:exon
so has part: feature:1409383-1410590:1:exon
so has part: feature:1412789-1413074:1:exon
so has part: feature:1415719-1415816:1:exon
so has part: feature:1417161-1419253:1:exon

position:1405869:1
position: 1405869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1405869-1406836:1:exon

position:1406836:1
position: 1406836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1409383-1410590:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1412789-1413074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1415719-1415816:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417161-1419253:1:exon

nacc1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: nacc1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleus accumbens-associated protein 1 isoform X1
translation: MAQTLQMAIPNFGNNVLECLNEQRLQGLYCDVSVVVKGHTFKAHRAVLAASSSYFRDLFNASGADGGGTKSGGVVVELPPAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQQIMEKGTEFFLKVSSPSCDSQGLHAEEAPPSEPQSPVTGGGGGAVAMARPSSCLTPLPLVTRVKTEQPQTQPQPQTQQQQPQQQQQQQPPPPLQQQQQQHHQQQQQPEPNSYSVVCTPVAKRLWEGGNRDGGSSGGGGGGMRKAARFSQEAANSRGGGSAGGGVGGGPGGASNQSGMGILGGTTITTNNSGSNSNNNNNNSSSNHPSEGTSPGTLSIYTSDSPISYHDEEEEEEMTDDAEEQYRQICNMYTMYSMLNVGAAAGEELRGWMEGWREREVAGERVDALPDHLTPDTRGRVRVRQELASLPAELIAQIGNRCHPKLYEEGDPAEKLELVSGTSVFISRAQLMNCHVSAGTRHKVLLRRLLASFFDRSTLANSCGTGIRSSTNDPSRKPLDSRVLHAVKFYCQNFAPTFKESEMNAIAADMCTNARRVVRKSWIPKLKLLMADSEAYASFLPEGLKLEADALAAEHGLEAPAAAALEGAEAGPSSADALQGEAGEAGTLF
SIO_010081: nacc1b
subclass of: SO_0000673
so part of: nacc1b
location: join(1409402..1410590,1412789..1413074,1415719..1415816,1417161..1417465)
location: region:1409402-1417465:1
so has part: feature:1409402-1410590:1:exon
so has part: feature:1412789-1413074:1:exon
so has part: feature:1415719-1415816:1:exon
so has part: feature:1417161-1417465:1:exon

XP_031417791.1
type: Protein
SIO_000068: ncbiprotein

position:1409402:1
position: 1409402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1417465:1
position: 1417465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1409402-1410590:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1412789-1413074:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415719-1415816:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1417161-1417465:1:exon

nacc1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: nacc1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleus accumbens-associated protein 1 isoform X1
translation: MAQTLQMAIPNFGNNVLECLNEQRLQGLYCDVSVVVKGHTFKAHRAVLAASSSYFRDLFNASGADGGGTKSGGVVVELPPAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQQIMEKGTEFFLKVSSPSCDSQGLHAEEAPPSEPQSPVTGGGGGAVAMARPSSCLTPLPLVTRVKTEQPQTQPQPQTQQQQPQQQQQQQPPPPLQQQQQQHHQQQQQPEPNSYSVVCTPVAKRLWEGGNRDGGSSGGGGGGMRKAARFSQEAANSRGGGSAGGGVGGGPGGASNQSGMGILGGTTITTNNSGSNSNNNNNNSSSNHPSEGTSPGTLSIYTSDSPISYHDEEEEEEMTDDAEEQYRQICNMYTMYSMLNVGAAAGEELRGWMEGWREREVAGERVDALPDHLTPDTRGRVRVRQELASLPAELIAQIGNRCHPKLYEEGDPAEKLELVSGTSVFISRAQLMNCHVSAGTRHKVLLRRLLASFFDRSTLANSCGTGIRSSTNDPSRKPLDSRVLHAVKFYCQNFAPTFKESEMNAIAADMCTNARRVVRKSWIPKLKLLMADSEAYASFLPEGLKLEADALAAEHGLEAPAAAALEGAEAGPSSADALQGEAGEAGTLF
SIO_010081: nacc1b
subclass of: SO_0000673
so part of: nacc1b
location: join(1409402..1410590,1412789..1413074,1415719..1415816,1417161..1417465)
location: region:1409402-1417465:1
so has part: feature:1409402-1410590:1:exon
so has part: feature:1412789-1413074:1:exon
so has part: feature:1415719-1415816:1:exon
so has part: feature:1417161-1417465:1:exon

XP_031417792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1409402-1410590:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1412789-1413074:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415719-1415816:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1417161-1417465:1:exon

nacc1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: nacc1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleus accumbens-associated protein 1 isoform X1
translation: MAQTLQMAIPNFGNNVLECLNEQRLQGLYCDVSVVVKGHTFKAHRAVLAASSSYFRDLFNASGADGGGTKSGGVVVELPPAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQQIMEKGTEFFLKVSSPSCDSQGLHAEEAPPSEPQSPVTGGGGGAVAMARPSSCLTPLPLVTRVKTEQPQTQPQPQTQQQQPQQQQQQQPPPPLQQQQQQHHQQQQQPEPNSYSVVCTPVAKRLWEGGNRDGGSSGGGGGGMRKAARFSQEAANSRGGGSAGGGVGGGPGGASNQSGMGILGGTTITTNNSGSNSNNNNNNSSSNHPSEGTSPGTLSIYTSDSPISYHDEEEEEEMTDDAEEQYRQICNMYTMYSMLNVGAAAGEELRGWMEGWREREVAGERVDALPDHLTPDTRGRVRVRQELASLPAELIAQIGNRCHPKLYEEGDPAEKLELVSGTSVFISRAQLMNCHVSAGTRHKVLLRRLLASFFDRSTLANSCGTGIRSSTNDPSRKPLDSRVLHAVKFYCQNFAPTFKESEMNAIAADMCTNARRVVRKSWIPKLKLLMADSEAYASFLPEGLKLEADALAAEHGLEAPAAAALEGAEAGPSSADALQGEAGEAGTLF
SIO_010081: nacc1b
subclass of: SO_0000673
so part of: nacc1b
location: join(1409402..1410590,1412789..1413074,1415719..1415816,1417161..1417465)
location: region:1409402-1417465:1
so has part: feature:1409402-1410590:1:exon
so has part: feature:1412789-1413074:1:exon
so has part: feature:1415719-1415816:1:exon
so has part: feature:1417161-1417465:1:exon

XP_031417793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1409402-1410590:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1412789-1413074:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415719-1415816:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1417161-1417465:1:exon

nacc1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: nacc1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleus accumbens-associated protein 1 isoform X2
translation: MAQTLQMAIPNFGNNVLECLNEQRLQGLYCDVSVVVKGHTFKAHRAVLAASSSYFRDLFNASGADGGGTKSGGVVVELPPAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQQIMEKGTEFFLKVSSPSCDSQGLHAEEAPPSEPQSPVTGGGGGAVAMARPSSCLTPLPLVTRVKTEQPQTQPQPQTQQQQPQQQQQQQPPPPLQQQQQQHHQQQQQPEPNSYSVVCTPVAKRLWEGGNRDGGSSGGGGGGMRKAARFSQEAANSRGGGSAGGGVGGGPGGASNQSGMGILGGTTITTNNSGSNSNNNNNNSSSNHPSEGTSPGTLSIYTSDSPISYHDEEEEEEMTDDAEEQYRQICNMYTMYSMLNVGAAAGEELRGWMEGWREREAGERVDALPDHLTPDTRGRVRVRQELASLPAELIAQIGNRCHPKLYEEGDPAEKLELVSGTSVFISRAQLMNCHVSAGTRHKVLLRRLLASFFDRSTLANSCGTGIRSSTNDPSRKPLDSRVLHAVKFYCQNFAPTFKESEMNAIAADMCTNARRVVRKSWIPKLKLLMADSEAYASFLPEGLKLEADALAAEHGLEAPAAAALEGAEAGPSSADALQGEAGEAGTLF
SIO_010081: nacc1b
subclass of: SO_0000673
so part of: nacc1b
location: join(1409402..1410590,1412792..1413074,1415719..1415816,1417161..1417465)
location: region:1409402-1417465:1
so has part: feature:1409402-1410590:1:exon
so has part: feature:1412792-1413074:1:exon
so has part: feature:1415719-1415816:1:exon
so has part: feature:1417161-1417465:1:exon

XP_031417794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1409402-1410590:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1412792-1413074:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415719-1415816:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1417161-1417465:1:exon

LOC105900256
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: LOC105900256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1419389..1440201)
location: region:1419389-1440201:-1
so has part: feature:1419389-1440201:-1:exon
subclass of: SO_0000010

105900256
type: Gene
SIO_000068: ncbigene

position:1419389:-1
position: 1419389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1440201:-1
position: 1440201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1419389-1440201:-1:exon

LOC105900256
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7950
gene: LOC105900256
product: syntaxin-10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004163079.2
SIO_010081: LOC105900256
so part of: LOC105900256
location: complement(join(1419389..1419408,1430146..1430420,1431400..1431494,1434415..1434521,1435362..1435463,1435608..1435670,1436672..1436766,1437604..1437773,1438974..1439117,1440077..1440201))
location: region:1419389-1440201:-1
so has part: feature:1440077-1440201:-1:exon
so has part: feature:1438974-1439117:-1:exon
so has part: feature:1437604-1437773:-1:exon
so has part: feature:1436672-1436766:-1:exon
so has part: feature:1435608-1435670:-1:exon
so has part: feature:1435362-1435463:-1:exon
so has part: feature:1434415-1434521:-1:exon
so has part: feature:1431400-1431494:-1:exon
so has part: feature:1430146-1430420:-1:exon
so has part: feature:1419389-1419408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1440077-1440201:-1:exon

position:1440077:-1
position: 1440077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1438974-1439117:-1:exon

position:1438974:-1
position: 1438974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439117:-1
position: 1439117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1437604-1437773:-1:exon

position:1437604:-1
position: 1437604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1437773:-1
position: 1437773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1436672-1436766:-1:exon

position:1436672:-1
position: 1436672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1436766:-1
position: 1436766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1435608-1435670:-1:exon

position:1435608:-1
position: 1435608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1435670:-1
position: 1435670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1435362-1435463:-1:exon

position:1435362:-1
position: 1435362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1435463:-1
position: 1435463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1434415-1434521:-1:exon

position:1434415:-1
position: 1434415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1434521:-1
position: 1434521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1431400-1431494:-1:exon

position:1431400:-1
position: 1431400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1431494:-1
position: 1431494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1430146-1430420:-1:exon

position:1430146:-1
position: 1430146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430420:-1
position: 1430420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1419389-1419408:-1:exon

position:1419408:-1
position: 1419408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105900256
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: LOC105900256
product: syntaxin-10, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_031561883.2
SIO_010081: LOC105900256
subclass of: SO_0000673
so part of: LOC105900256
location: complement(join(1428233..1430420,1431400..1431494,1434415..1434521,1435362..1435463,1435608..1435670,1436672..1436766,1437604..1437773,1438974..1439117,1440077..1440201))
location: region:1428233-1440201:-1
so has part: feature:1440077-1440201:-1:exon
so has part: feature:1438974-1439117:-1:exon
so has part: feature:1437604-1437773:-1:exon
so has part: feature:1436672-1436766:-1:exon
so has part: feature:1435608-1435670:-1:exon
so has part: feature:1435362-1435463:-1:exon
so has part: feature:1434415-1434521:-1:exon
so has part: feature:1431400-1431494:-1:exon
so has part: feature:1428233-1430420:-1:exon

position:1428233:-1
position: 1428233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1440077-1440201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1438974-1439117:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437604-1437773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1436672-1436766:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1435608-1435670:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1435362-1435463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1434415-1434521:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1431400-1431494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1428233-1430420:-1:exon

LOC105900256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: LOC105900256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-10
translation: MSMEDPFFVVKGEVQKALSRARGLFERWEELLQEGTPVSRDELDWSTNELRNCLRAIDWDLEDLHETISIVETNPGKFRLGENELQERRAFVERTRQSVQEMKEQLSSPSAVAQAEKKNREALMAAPSQDRFAGLEPHLVSANSRYIQEQQEQQQLIMQDQDAELELVTGSIRVLKDMSGRIGDELDDQTVMLGEFSEEMDQTGSRMDSVLKKMEKVSHMTSSRRQWCAIGVLITIILVVLILLFAL
SIO_010081: LOC105900256
subclass of: SO_0000673
so part of: LOC105900256
location: complement(join(1430344..1430420,1431400..1431494,1434415..1434521,1435362..1435463,1435608..1435670,1436672..1436766,1437604..1437773,1438974..1439008))
location: region:1430344-1439008:-1
so has part: feature:1438974-1439008:-1:exon
so has part: feature:1437604-1437773:-1:exon
so has part: feature:1436672-1436766:-1:exon
so has part: feature:1435608-1435670:-1:exon
so has part: feature:1435362-1435463:-1:exon
so has part: feature:1434415-1434521:-1:exon
so has part: feature:1431400-1431494:-1:exon
so has part: feature:1430344-1430420:-1:exon

XP_031417743.1
type: Protein
SIO_000068: ncbiprotein

position:1430344:-1
position: 1430344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439008:-1
position: 1439008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1438974-1439008:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1437604-1437773:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1436672-1436766:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1435608-1435670:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1435362-1435463:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1434415-1434521:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1431400-1431494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1430344-1430420:-1:exon

ier2b
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: ier2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1445171..1446625
location: region:1445171-1446625:1
so has part: feature:1445171-1446625:1:exon
subclass of: SO_0000010

105900262
type: Gene
SIO_000068: ncbigene

position:1445171:1
position: 1445171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1446625:1
position: 1446625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1445171-1446625:1:exon

ier2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: ier2b
product: immediate early response 2b
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_031562354.2
SIO_010081: ier2b
subclass of: SO_0000673
so part of: ier2b
location: 1445171..1446625
location: region:1445171-1446625:1
so has part: feature:1445171-1446625:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1445171-1446625:1:exon

ier2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: ier2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immediate early response 2b
translation: MNLNEEAKRIMALSIGKLYSSRTQRGGLRLHRSLLLSLVMRSARDIYHSVQFLNETEEQQHTVPCESQQSAIEEPMDTATDQTVPEVSISTETDPMPNDEGDIKPLKAEDGEWDKENRDSSHCDRHSRKRRGKAAAEPEFLPSKKAKMDIEDDRRVGVLRSSNGNCCRSVEILTLSVPSAIEAF
SIO_010081: ier2b
subclass of: SO_0000673
so part of: ier2b
location: 1445338..1445892
location: region:1445338-1445892:1
so has part: feature:1445338-1445892:1:exon

XP_031418214.1
type: Protein
SIO_000068: ncbiprotein

position:1445338:1
position: 1445338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445892:1
position: 1445892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1445338-1445892:1:exon

cacna1ab
type: Gene
subclass of: SO_0000704
RO_0002162: 7950
gene: cacna1ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1457023..1622011)
location: region:1457023-1622011:-1
so has part: feature:1457023-1622011:-1:exon
subclass of: SO_0000010

105900243
type: Gene
SIO_000068: ncbigene

position:1457023:-1
position: 1457023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1622011:-1
position: 1622011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1457023-1622011:-1:exon

cacna1ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: cacna1ab
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042703636.1
SIO_010081: cacna1ab
subclass of: SO_0000673
so part of: cacna1ab
location: complement(join(1457023..1458187,1459754..1460004,1466199..1466412,1471784..1471897,1473006..1473129,1473683..1473795,1475893..1475993,1478505..1478612,1479407..1479512,1483961..1484057,1487864..1487991,1488735..1488885,1489269..1489360,1489659..1489724,1490497..1490613,1494631..1494714,1495291..1495401,1495789..1495953,1496448..1496649,1496992..1497132,1497608..1497768,1498019..1498118,1505249..1505355,1506003..1506062,1506730..1506859,1507535..1507676,1508549..1508883,1509344..1509876,1510114..1510246,1513625..1513731,1514174..1514241,1514683..1514800,1515054..1515126,1515522..1515653,1516099..1516211,1516649..1516761,1517741..1517950,1518632..1518715,1519160..1519210,1519836..1519951,1521281..1521384,1524238..1524425,1525022..1525174,1525577..1525668,1542375..1542514,1543048..1543153,1576400..1576663,1612424..1612828,1621188..1622011))
location: region:1457023-1622011:-1
so has part: feature:1621188-1622011:-1:exon
so has part: feature:1612424-1612828:-1:exon
so has part: feature:1576400-1576663:-1:exon
so has part: feature:1543048-1543153:-1:exon
so has part: feature:1542375-1542514:-1:exon
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 6
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SIO_000300: 13
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SIO_000300: 15
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SIO_000300: 17
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SIO_000300: 18
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SIO_000300: 19
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SIO_000300: 20
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SIO_000300: 21
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SIO_000300: 22
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
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SIO_000300: 25
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urn:…
SIO_000300: 26
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urn:…
SIO_000300: 27
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SIO_000300: 28
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SIO_000300: 29
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urn:…
SIO_000300: 30
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SIO_000300: 31
SIO_000628: feature:1496448-1496649:-1:exon

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urn:…
SIO_000300: 32
SIO_000628: feature:1495789-1495953:-1:exon

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urn:…
SIO_000300: 33
SIO_000628: feature:1495291-1495401:-1:exon

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urn:…
SIO_000300: 34
SIO_000628: feature:1494631-1494714:-1:exon

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SIO_000300: 35
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SIO_000300: 36
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urn:…
SIO_000300: 37
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SIO_000300: 38
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SIO_000300: 39
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SIO_000300: 40
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SIO_000300: 41
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SIO_000300: 42
SIO_000628: feature:1478505-1478612:-1:exon

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SIO_000300: 44
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SIO_000300: 45
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urn:…
SIO_000300: 46
SIO_000628: feature:1471784-1471897:-1:exon

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urn:…
SIO_000300: 47
SIO_000628: feature:1466199-1466412:-1:exon

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urn:…
SIO_000300: 48
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urn:…
SIO_000300: 49
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cacna1ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: cacna1ab
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042703632.1
SIO_010081: cacna1ab
subclass of: SO_0000673
so part of: cacna1ab
location: complement(join(1457023..1458187,1459754..1460004,1466199..1466412,1471784..1471897,1473006..1473129,1473683..1473795,1475893..1475993,1478505..1478612,1479407..1479512,1483961..1484057,1487864..1487991,1488735..1488885,1489269..1489360,1489659..1489724,1490497..1490613,1494631..1494714,1495291..1495401,1495789..1495953,1496448..1496649,1496992..1497132,1497608..1497768,1498019..1498118,1505249..1505355,1506003..1506062,1506730..1506859,1507535..1507676,1508549..1508883,1509344..1509876,1510114..1510246,1512257..1512307,1513625..1513731,1514174..1514241,1514683..1514800,1515054..1515126,1515522..1515653,1516099..1516211,1516649..1516761,1517741..1517950,1518632..1518715,1519160..1519210,1519836..1519951,1521281..1521384,1524238..1524425,1525022..1525174,1525577..1525668,1542375..1542514,1543048..1543153,1576400..1576663,1612424..1612828,1621188..1622011))
location: region:1457023-1622011:-1
so has part: feature:1621188-1622011:-1:exon
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so has part: feature:1576400-1576663:-1:exon
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so has part: feature:1483961-1484057:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:1621188-1622011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1612424-1612828:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1576400-1576663:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:1542375-1542514:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525577-1525668:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1525022-1525174:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1524238-1524425:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1521281-1521384:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1519836-1519951:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1519160-1519210:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1518632-1518715:-1:exon

urn:…
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cacna1ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: cacna1ab
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042703630.1
SIO_010081: cacna1ab
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cacna1ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: cacna1ab
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042703628.1
SIO_010081: cacna1ab
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cacna1ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: cacna1ab
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042703627.1
SIO_010081: cacna1ab
subclass of: SO_0000673
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cacna1ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: cacna1ab
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042703637.1
SIO_010081: cacna1ab
subclass of: SO_0000673
so part of: cacna1ab
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cacna1ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: cacna1ab
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042703635.1
SIO_010081: cacna1ab
subclass of: SO_0000673
so part of: cacna1ab
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cacna1ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: cacna1ab
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042703634.1
SIO_010081: cacna1ab
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cacna1ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: cacna1ab
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042703631.1
SIO_010081: cacna1ab
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cacna1ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: cacna1ab
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042703629.1
SIO_010081: cacna1ab
subclass of: SO_0000673
so part of: cacna1ab
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location: region:1457023-1622010:-1
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cacna1ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: cacna1ab
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042703633.1
SIO_010081: cacna1ab
subclass of: SO_0000673
so part of: cacna1ab
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location: region:1457023-1622010:-1
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position:1473771:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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cacna1ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7950
gene: cacna1ab
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042703626.1
SIO_010081: cacna1ab
subclass of: SO_0000673
so part of: cacna1ab
location: complement(join(1457023..1458187,1459754..1460004,1466199..1466412,1471784..1471897,1473006..1473129,1473683..1473795,1475893..1475996,1478505..1478612,1479407..1479512,1485512..1485608,1487864..1487991,1488735..1488885,1489269..1489360,1489659..1489724,1490497..1490613,1494631..1494714,1495291..1495401,1495789..1495953,1496448..1496649,1496992..1497132,1497608..1497768,1498019..1498118,1499625..1499636,1505249..1505355,1506003..1506062,1506730..1506859,1507535..1507676,1508549..1508883,1509344..1509876,1510114..1510246,1512257..1512307,1513625..1513731,1514174..1514241,1514683..1514800,1515054..1515126,1515522..1515653,1516099..1516211,1516649..1516761,1517741..1517950,1518632..1518715,1519160..1519210,1519836..1519951,1521281..1521384,1524238..1524425,1525022..1525174,1525577..1525668,1542375..1542514,1543048..1543153,1576400..1576663,1612424..1612828,1621188..1622010))
location: region:1457023-1622010:-1
so has part: feature:1621188-1622010:-1:exon
so has part: feature:1612424-1612828:-1:exon
so has part: feature:1576400-1576663:-1:exon
so has part: feature:1543048-1543153:-1:exon
so has part: feature:1542375-1542514:-1:exon
so has part: feature:1525577-1525668:-1:exon
so has part: feature:1525022-1525174:-1:exon
so has part: feature:1524238-1524425:-1:exon
so has part: feature:1521281-1521384:-1:exon
so has part: feature:1519836-1519951:-1:exon
so has part: feature:1519160-1519210:-1:exon
so has part: feature:1518632-1518715:-1:exon
so has part: feature:1517741-1517950:-1:exon
so has part: feature:1516649-1516761:-1:exon
so has part: feature:1516099-1516211:-1:exon
so has part: feature:1515522-1515653:-1:exon
so has part: feature:1515054-1515126:-1:exon
so has part: feature:1514683-1514800:-1:exon
so has part: feature:1514174-1514241:-1:exon
so has part: feature:1513625-1513731:-1:exon
so has part: feature:1512257-1512307:-1:exon
so has part: feature:1510114-1510246:-1:exon
so has part: feature:1509344-1509876:-1:exon
so has part: feature:1508549-1508883:-1:exon
so has part: feature:1507535-1507676:-1:exon
so has part: feature:1506730-1506859:-1:exon
so has part: feature:1506003-1506062:-1:exon
so has part: feature:1505249-1505355:-1:exon
so has part: feature:1499625-1499636:-1:exon
so has part: feature:1498019-1498118:-1:exon
so has part: feature:1497608-1497768:-1:exon
so has part: feature:1496992-1497132:-1:exon
so has part: feature:1496448-1496649:-1:exon
so has part: feature:1495789-1495953:-1:exon
so has part: feature:1495291-1495401:-1:exon
so has part: feature:1494631-1494714:-1:exon
so has part: feature:1490497-1490613:-1:exon
so has part: feature:1489659-1489724:-1:exon
so has part: feature:1489269-1489360:-1:exon
so has part: feature:1488735-1488885:-1:exon
so has part: feature:1487864-1487991:-1:exon
so has part: feature:1485512-1485608:-1:exon
so has part: feature:1479407-1479512:-1:exon
so has part: feature:1478505-1478612:-1:exon
so has part: feature:1475893-1475996:-1:exon
so has part: feature:1473683-1473795:-1:exon
so has part: feature:1473006-1473129:-1:exon
so has part: feature:1471784-1471897:-1:exon
so has part: feature:1466199-1466412:-1:exon
so has part: feature:1459754-1460004:-1:exon
so has part: feature:1457023-1458187:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1621188-1622010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1612424-1612828:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1576400-1576663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1543048-1543153:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1542375-1542514:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525577-1525668:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1525022-1525174:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1524238-1524425:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1521281-1521384:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1519836-1519951:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1519160-1519210:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1518632-1518715:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1517741-1517950:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1516649-1516761:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1516099-1516211:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1515522-1515653:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1515054-1515126:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1514683-1514800:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1514174-1514241:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1513625-1513731:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1512257-1512307:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1510114-1510246:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1509344-1509876:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1508549-1508883:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1507535-1507676:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1506730-1506859:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1506003-1506062:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1505249-1505355:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1499625-1499636:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1498019-1498118:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1497608-1497768:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1496992-1497132:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1496448-1496649:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1495789-1495953:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1495291-1495401:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1494631-1494714:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1490497-1490613:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1489659-1489724:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1489269-1489360:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1488735-1488885:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1487864-1487991:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1485512-1485608:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1479407-1479512:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1478505-1478612:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1475893-1475996:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1473683-1473795:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1473006-1473129:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1471784-1471897:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1466199-1466412:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1459754-1460004:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1457023-1458187:-1:exon

cacna1ab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: cacna1ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X11
translation: MLSPLCSDGSVIVERAPARWPPQGSSSQRRRPGHFPPPTSGSSVCANPTYYHAVYDVRVEQCREAPPFAFGRRDSGAGGGTGASLYSLVSAGGDALPAPPIRRRGGLVEHRDVIKAHQSHKLQSTPQALRKEWEMARFGDEVPARYGGGGPSQGGPGRGGSRQGGPPAPRVYKQSMAQRARTMALYNPIPVRQSCLTVNRSLFIFSEDNFVRKYAKKITEWPPFEWMILTTIIANCIVLALEQHLPDGDKTPLSERLDDTEPYFIAIFCFESGIKILALGFAFHKGSYLRSGWNVMDFVVVMTGILSTVGSEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFVAILMFAIIGLEFYMGKFHKTCFNNITREIYDKQPCGEALPARLCPEGTVCREYWIGPNYGITQFDNILFAVLTVFQCITMEGWTDMLYYSNDTSGSAYNWMYFVPLIIIGSFFMLNLVLGVLSGEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEDDKNPGNTYDAKRRPTLKKTKTDLLNSEQGADHMGDAVGSPFARGSLKNGKGGDATPFDKRERRLRFFIRKIVKTQAFYWTVLSLVGLNTMCVAAVHYDQPDLLSDFLFYAEFIFLGLFMSEMLIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWALIKPGTSFGISVLRALRLLRIFKVTKYWAPLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDGTPSTNFDTFPAAIMTVFQVLTGEDWNMVMYDGIESQGGVNTGMVFSIFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEETAATNQKIAIQKAKEVAEVSPLSAANLSIAAKEQQKNSKLPKSVWEARTAEIRRQNLMTSREALYNELDAEDAWKTNFRQNRADVKTHLDRPLVVNPQENRNNNTNKPRPGEPPEQALDHSQPCLQQPARHPGGRTGPGGGAGPGAGGLNLAHSLQSLQEEAEEMEEEGGGGGGGGGRRHHHHHHPHHHRHQHRGEGSEGSEQPRRAKQHRRRAAEAGEGEDGNAGGQERRHRRRRHDNTDGCREKCRQHRRKESGLSTSRPIHQALSRQDSQYSEDLDNLRNSSKLFLDQDPEGDLDSEPFYSHSHPERANNLLNLRGPGGRELQPGGGGGGGSSLILFDLSKAPLEHTAIHMPPLYPNAIMQVNKNANTEGNKKDEEKKEEEDDDEGDGDGKPKPMPPFSSCFIMSTTNPFRKCCHYILTLRYFEMCILSVIAMSSIALAAEDPVRPDSAQNNVLRYFDYVFTGVFTFEMLIKMVVLGLFLHQGAYFRDLWNILDFIVVSGALVAFAFTGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFFCTDESKEFERDCRGEYLVYNGNDEVKAQKREWKKYDFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERACIDFAINAKPLTRHMPKNKQSFQYRMWQFVVSPPFEYSIMSLIALNTVVLMMKYNDAPDAYDKVLKNLNIVFTTLFFTECVLKIIAFGILNYFMDAWNIFDFVSVLGSVTDIIVTEFVNNFINLSFLRLFRAARLIKLLRQQETIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGNVDLDEENAINEHNNFRTFIMALMLLFRSATGEAWHDIMLACLGGMPCDPETGNPNPECGSNISYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRISYSDMYQMLRHMCPPLGLGKRCPARVAYKRLLRMDLPVAEDNSVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMMAIWPNLSQKHLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKKLQALREE…
SIO_010081: cacna1ab
subclass of: SO_0000673
so part of: cacna1ab
location: complement(join(1457396..1458187,1459754..1460004,1466199..1466412,1471784..1471897,1473006..1473129,1473683..1473795,1475893..1475993,1478505..1478612,1479407..1479512,1483961..1484057,1487864..1487991,1488735..1488885,1489269..1489360,1489659..1489724,1490497..1490613,1494631..1494714,1495291..1495401,1495789..1495953,1496448..1496649,1496992..1497132,1497608..1497768,1498019..1498118,1505249..1505355,1506003..1506062,1506730..1506859,1507535..1507676,1508549..1508883,1509344..1509876,1510114..1510246,1513625..1513731,1514174..1514241,1514683..1514800,1515054..1515126,1515522..1515653,1516099..1516211,1516649..1516761,1517741..1517950,1518632..1518715,1519160..1519210,1519836..1519951,1521281..1521384,1524238..1524425,1525022..1525174,1525577..1525668,1542375..1542514,1543048..1543153,1576400..1576663,1612424..1612824))
location: region:1457396-1612824:-1
so has part: feature:1612424-1612824:-1:exon
so has part: feature:1576400-1576663:-1:exon
so has part: feature:1543048-1543153:-1:exon
so has part: feature:1542375-1542514:-1:exon
so has part: feature:1525577-1525668:-1:exon
so has part: feature:1525022-1525174:-1:exon
so has part: feature:1524238-1524425:-1:exon
so has part: feature:1521281-1521384:-1:exon
so has part: feature:1519836-1519951:-1:exon
so has part: feature:1519160-1519210:-1:exon
so has part: feature:1518632-1518715:-1:exon
so has part: feature:1517741-1517950:-1:exon
so has part: feature:1516649-1516761:-1:exon
so has part: feature:1516099-1516211:-1:exon
so has part: feature:1515522-1515653:-1:exon
so has part: feature:1515054-1515126:-1:exon
so has part: feature:1514683-1514800:-1:exon
so has part: feature:1514174-1514241:-1:exon
so has part: feature:1513625-1513731:-1:exon
so has part: feature:1510114-1510246:-1:exon
so has part: feature:1509344-1509876:-1:exon
so has part: feature:1508549-1508883:-1:exon
so has part: feature:1507535-1507676:-1:exon
so has part: feature:1506730-1506859:-1:exon
so has part: feature:1506003-1506062:-1:exon
so has part: feature:1505249-1505355:-1:exon
so has part: feature:1498019-1498118:-1:exon
so has part: feature:1497608-1497768:-1:exon
so has part: feature:1496992-1497132:-1:exon
so has part: feature:1496448-1496649:-1:exon
so has part: feature:1495789-1495953:-1:exon
so has part: feature:1495291-1495401:-1:exon
so has part: feature:1494631-1494714:-1:exon
so has part: feature:1490497-1490613:-1:exon
so has part: feature:1489659-1489724:-1:exon
so has part: feature:1489269-1489360:-1:exon
so has part: feature:1488735-1488885:-1:exon
so has part: feature:1487864-1487991:-1:exon
so has part: feature:1483961-1484057:-1:exon
so has part: feature:1479407-1479512:-1:exon
so has part: feature:1478505-1478612:-1:exon
so has part: feature:1475893-1475993:-1:exon
so has part: feature:1473683-1473795:-1:exon
so has part: feature:1473006-1473129:-1:exon
so has part: feature:1471784-1471897:-1:exon
so has part: feature:1466199-1466412:-1:exon
so has part: feature:1459754-1460004:-1:exon
so has part: feature:1457396-1458187:-1:exon

XP_042559570.1
type: Protein
SIO_000068: ncbiprotein

position:1457396:-1
position: 1457396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1612824:-1
position: 1612824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1612424-1612824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1576400-1576663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1543048-1543153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1542375-1542514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1525577-1525668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525022-1525174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1524238-1524425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1521281-1521384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1519836-1519951:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1519160-1519210:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1518632-1518715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1517741-1517950:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1516649-1516761:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1516099-1516211:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1515522-1515653:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1515054-1515126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1514683-1514800:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1514174-1514241:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1513625-1513731:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1510114-1510246:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1509344-1509876:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1508549-1508883:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1507535-1507676:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1506730-1506859:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1506003-1506062:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1505249-1505355:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1498019-1498118:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1497608-1497768:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1496992-1497132:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1496448-1496649:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1495789-1495953:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1495291-1495401:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1494631-1494714:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1490497-1490613:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1489659-1489724:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1489269-1489360:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1488735-1488885:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1487864-1487991:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1483961-1484057:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1479407-1479512:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1478505-1478612:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1475893-1475993:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1473683-1473795:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1473006-1473129:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1471784-1471897:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1466199-1466412:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1459754-1460004:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1457396-1458187:-1:exon

cacna1ab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: cacna1ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X12
translation: MLSPLCSDGSVIVERAPARWPPQGSSSQRRRPGHFPPPTSGSSVCANPTYYHAVYDVRVEQCREAPPFAFGRRDSGAGGGTGASLYSLVSAGGDALPAPPIRRRGGLVEHRDVIKAHQSHKLQSTPQALRKEWEMARFGDEVPARYGGGGPSQGGPGRGGSRQGGPPAPRVYKQSMAQRARTMALYNPIPVRQSCLTVNRSLFIFSEDNFVRKYAKKITEWPPFEWMILTTIIANCIVLALEQHLPDGDKTPLSERLDDTEPYFIAIFCFESGIKILALGFAFHKGSYLRSGWNVMDFVVVMTGILSTVGSEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFVAILMFAIIGLEFYMGKFHKTCFNNITREIYDKQPCGEALPARLCPEGTVCREYWIGPNYGITQFDNILFAVLTVFQCITMEGWTDMLYYSNDTSGSAYNWMYFVPLIIIGSFFMLNLVLGVLSGEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEDDKNPGNTYDAKRRPTLKKTKTDLLNSEQGADHMGDAVGSPFARGSLKNGKGGDATPFDKRERRLRFFIRKIVKTQAFYWTVLSLVGLNTMCVAAVHYDQPDLLSDFLFYAEFIFLGLFMSEMLIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWALIKPGTSFGISVLRALRLLRIFKVTKYWAPLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDGTPSTNFDTFPAAIMTVFQVLTGEDWNMVMYDGIESQGGVNTGMVFSIFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEETAATNQKIAIQKAKEVAEVSPLSAANLSIAAKEQQKNSKLPKSVWEARTAEIRRQNLMTSREALYNELDAEDAWKTNFRQNRADVKTHLDRPLVVNPQENRNNNTNKPRPGEPPEQALDHSQPCLQQPARHPGGRTGPGGGAGPGAGGLNLAHSLQSLQEEAEEMEEEGGGGGGGGGRRHHHHHHPHHHRHQHRGEGSEGSEQPRRAKQHRRRAAEAGEGEDGNAGGQERRHRRRRHDNTDGCREKCRQHRRKESGLSTSRPIHQALSRQDSQYSEDLDNLRNSSKLFLDQDPEGDLDSEPFYSHSHPERANNLLNLRGPGGRELQPGGGGGGGSSLILFDLSKAPLEHTAIHMPPLYPNAIMQVNKNANTEGNKKDEEKKEEEDDDEGDGDGKPKPMPPFSSCFIMSTTNPFRKCCHYILTLRYFEMCILSVIAMSSIALAAEDPVRPDSAQNNVLRYFDYVFTGVFTFEMLIKMVVLGLFLHQGAYFRDLWNILDFIVVSGALVAFAFTGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFFCTDESKEFERDCRGEYLVYNGNDEVKAQKREWKKYDFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERACIDFAINAKPLTRHMPKNKQSFQYRMWQFVVSPPFEYSIMSLIALNTVVLMMKYNDAPDAYDKVLKNLNIVFTTLFFTECVLKIIAFGILNYFMDAWNIFDFVSVLGSVTDIIVTEFVNNFINLSFLRLFRAARLIKLLRQQETIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGNVDLDEENAINEHNNFRTFIMALMLLFRSATGEAWHDIMLACLGGMPCDPETGNPNPECGSNISYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVIDPPLGLGKKCPHRVACKRLLRMDLPVAEDNSVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMMAIWPNLSQKHLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKKLQALREE…
SIO_010081: cacna1ab
subclass of: SO_0000673
so part of: cacna1ab
location: complement(join(1457396..1458187,1459754..1460004,1466199..1466412,1471784..1471897,1473006..1473129,1473683..1473795,1475893..1475993,1478505..1478612,1479407..1479512,1485512..1485608,1487864..1487991,1488735..1488885,1489269..1489360,1489659..1489724,1490497..1490613,1494631..1494714,1495291..1495401,1495789..1495953,1496448..1496649,1496992..1497132,1497608..1497768,1498019..1498118,1505249..1505355,1506003..1506062,1506730..1506859,1507535..1507676,1508549..1508883,1509344..1509876,1510114..1510246,1513625..1513731,1514174..1514241,1514683..1514800,1515054..1515126,1515522..1515653,1516099..1516211,1516649..1516761,1517741..1517950,1518632..1518715,1519160..1519210,1519836..1519951,1521281..1521384,1524238..1524425,1525022..1525174,1525577..1525668,1542375..1542514,1543048..1543153,1576400..1576663,1612424..1612824))
location: region:1457396-1612824:-1
so has part: feature:1612424-1612824:-1:exon
so has part: feature:1576400-1576663:-1:exon
so has part: feature:1543048-1543153:-1:exon
so has part: feature:1542375-1542514:-1:exon
so has part: feature:1525577-1525668:-1:exon
so has part: feature:1525022-1525174:-1:exon
so has part: feature:1524238-1524425:-1:exon
so has part: feature:1521281-1521384:-1:exon
so has part: feature:1519836-1519951:-1:exon
so has part: feature:1519160-1519210:-1:exon
so has part: feature:1518632-1518715:-1:exon
so has part: feature:1517741-1517950:-1:exon
so has part: feature:1516649-1516761:-1:exon
so has part: feature:1516099-1516211:-1:exon
so has part: feature:1515522-1515653:-1:exon
so has part: feature:1515054-1515126:-1:exon
so has part: feature:1514683-1514800:-1:exon
so has part: feature:1514174-1514241:-1:exon
so has part: feature:1513625-1513731:-1:exon
so has part: feature:1510114-1510246:-1:exon
so has part: feature:1509344-1509876:-1:exon
so has part: feature:1508549-1508883:-1:exon
so has part: feature:1507535-1507676:-1:exon
so has part: feature:1506730-1506859:-1:exon
so has part: feature:1506003-1506062:-1:exon
so has part: feature:1505249-1505355:-1:exon
so has part: feature:1498019-1498118:-1:exon
so has part: feature:1497608-1497768:-1:exon
so has part: feature:1496992-1497132:-1:exon
so has part: feature:1496448-1496649:-1:exon
so has part: feature:1495789-1495953:-1:exon
so has part: feature:1495291-1495401:-1:exon
so has part: feature:1494631-1494714:-1:exon
so has part: feature:1490497-1490613:-1:exon
so has part: feature:1489659-1489724:-1:exon
so has part: feature:1489269-1489360:-1:exon
so has part: feature:1488735-1488885:-1:exon
so has part: feature:1487864-1487991:-1:exon
so has part: feature:1485512-1485608:-1:exon
so has part: feature:1479407-1479512:-1:exon
so has part: feature:1478505-1478612:-1:exon
so has part: feature:1475893-1475993:-1:exon
so has part: feature:1473683-1473795:-1:exon
so has part: feature:1473006-1473129:-1:exon
so has part: feature:1471784-1471897:-1:exon
so has part: feature:1466199-1466412:-1:exon
so has part: feature:1459754-1460004:-1:exon
so has part: feature:1457396-1458187:-1:exon

XP_042559571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1612424-1612824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1576400-1576663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1543048-1543153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1542375-1542514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1525577-1525668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525022-1525174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1524238-1524425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1521281-1521384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1519836-1519951:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1519160-1519210:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1518632-1518715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1517741-1517950:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1516649-1516761:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1516099-1516211:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1515522-1515653:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1515054-1515126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1514683-1514800:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1514174-1514241:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1513625-1513731:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1510114-1510246:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1509344-1509876:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1508549-1508883:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1507535-1507676:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1506730-1506859:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1506003-1506062:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1505249-1505355:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1498019-1498118:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1497608-1497768:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1496992-1497132:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1496448-1496649:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1495789-1495953:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1495291-1495401:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1494631-1494714:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1490497-1490613:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1489659-1489724:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1489269-1489360:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1488735-1488885:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1487864-1487991:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1485512-1485608:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1479407-1479512:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1478505-1478612:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1475893-1475993:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1473683-1473795:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1473006-1473129:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1471784-1471897:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1466199-1466412:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1459754-1460004:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1457396-1458187:-1:exon

cacna1ab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: cacna1ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X10
translation: MLSPLCSDGSVIVERAPARWPPQGSSSQRRRPGHFPPPTSGSSVCANPTYYHAVYDVRVEQCREAPPFAFGRRDSGAGGGTGASLYSLVSAGGDALPAPPIRRRGGLVEHRDVIKAHQSHKLQSTPQALRKEWEMARFGDEVPARYGGGGPSQGGPGRGGSRQGGPPAPRVYKQSMAQRARTMALYNPIPVRQSCLTVNRSLFIFSEDNFVRKYAKKITEWPPFEWMILTTIIANCIVLALEQHLPDGDKTPLSERLDDTEPYFIAIFCFESGIKILALGFAFHKGSYLRSGWNVMDFVVVMTGILSTVGSEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFVAILMFAIIGLEFYMGKFHKTCFNNITREIYDKQPCGEALPARLCPEGTVCREYWIGPNYGITQFDNILFAVLTVFQCITMEGWTDMLYYSNDTSGSAYNWMYFVPLIIIGSFFMLNLVLGVLSGEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEDDKNPGNTYDAKRRPTLKKTKTDLLNSEQGADHMGDAVGSPFARGSLKNGKGGDATPFDKRERRLRFFIRKIVKTQAFYWTVLSLVGLNTMCVAAVHYDQPDLLSDFLFYAEFIFLGLFMSEMLIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWALIKPGTSFGISVLRALRLLRIFKVTKYWAPLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDGTPSTNFDTFPAAIMTVFQVLTGEDWNMVMYDGIESQGGVNTGMVFSIFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEETAATNQKIAIQKAKEVAEVSPLSAANLSIAAKEQQKNSKLPKSVWEARTAEIRRQNLMTSREALYNELDAEDAWKTNFRQNRADVKTHLDRPLVVNPQENRNNNTNKPRPGEPPEQALDHSQPCLQQPARHPGGRTGPGGGAGPGAGGLNLAHSLQSLQEEAEEMEEEGGGGGGGGGRRHHHHHHPHHHRHQHRGEGSEGSEQPRRAKQHRRRAAEAGEGEDGNAGGQERRHRRRRHDNTDGCREKCRQHRRKESGLSTSRPIHQALSRQDSQYSEDLDNLRNSSKLFLDQDPEGDLDSEPFYSHSHPERANNLLNLRGPGGRELQPGGGGGGGSSLILFDLSKAPLEHTAIHMPPLYPNAIMQVNKNANTEGNKKDEEKKEEEDDDEGDGDGKPKPMPPFSSCFIMSTTNPFRKCCHYILTLRYFEMCILSVIAMSSIALAAEDPVRPDSAQNNVLRYFDYVFTGVFTFEMLIKMVVLGLFLHQGAYFRDLWNILDFIVVSGALVAFAFTGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFFCTDESKEFERDCRGEYLVYNGNDEVKAQKREWKKYDFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERACIDFAINAKPLTRHMPKNKQSFQYRMWQFVVSPPFEYSIMSLIALNTVVLMMKYNDAPDAYDKVLKNLNIVFTTLFFTECVLKIIAFGILNYFMDAWNIFDFVSVLGSVTDIIVTEFVNNFINLSFLRLFRAARLIKLLRQQETIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGNVDLDEENAINEHNNFRTFIMALMLLFRSATGEAWHDIMLACLGGMPCDPETGNPNPECGSNISYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVIDPPLGLGKKCPHRVACKRLLRMDLPVAEDNSVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMMAIWPNLSQKHLDLLVTPHKSATDLTVGKIYAAMMIMEYYRQSKAKKLQALRE…
SIO_010081: cacna1ab
subclass of: SO_0000673
so part of: cacna1ab
location: complement(join(1457396..1458187,1459754..1460004,1466199..1466412,1471784..1471897,1473006..1473129,1473683..1473795,1475893..1475996,1478505..1478612,1479407..1479512,1485512..1485608,1487864..1487991,1488735..1488885,1489269..1489360,1489659..1489724,1490497..1490613,1494631..1494714,1495291..1495401,1495789..1495953,1496448..1496649,1496992..1497132,1497608..1497768,1498019..1498118,1505249..1505355,1506003..1506062,1506730..1506859,1507535..1507676,1508549..1508883,1509344..1509876,1510114..1510246,1513625..1513731,1514174..1514241,1514683..1514800,1515054..1515126,1515522..1515653,1516099..1516211,1516649..1516761,1517741..1517950,1518632..1518715,1519160..1519210,1519836..1519951,1521281..1521384,1524238..1524425,1525022..1525174,1525577..1525668,1542375..1542514,1543048..1543153,1576400..1576663,1612424..1612824))
location: region:1457396-1612824:-1
so has part: feature:1612424-1612824:-1:exon
so has part: feature:1576400-1576663:-1:exon
so has part: feature:1543048-1543153:-1:exon
so has part: feature:1542375-1542514:-1:exon
so has part: feature:1525577-1525668:-1:exon
so has part: feature:1525022-1525174:-1:exon
so has part: feature:1524238-1524425:-1:exon
so has part: feature:1521281-1521384:-1:exon
so has part: feature:1519836-1519951:-1:exon
so has part: feature:1519160-1519210:-1:exon
so has part: feature:1518632-1518715:-1:exon
so has part: feature:1517741-1517950:-1:exon
so has part: feature:1516649-1516761:-1:exon
so has part: feature:1516099-1516211:-1:exon
so has part: feature:1515522-1515653:-1:exon
so has part: feature:1515054-1515126:-1:exon
so has part: feature:1514683-1514800:-1:exon
so has part: feature:1514174-1514241:-1:exon
so has part: feature:1513625-1513731:-1:exon
so has part: feature:1510114-1510246:-1:exon
so has part: feature:1509344-1509876:-1:exon
so has part: feature:1508549-1508883:-1:exon
so has part: feature:1507535-1507676:-1:exon
so has part: feature:1506730-1506859:-1:exon
so has part: feature:1506003-1506062:-1:exon
so has part: feature:1505249-1505355:-1:exon
so has part: feature:1498019-1498118:-1:exon
so has part: feature:1497608-1497768:-1:exon
so has part: feature:1496992-1497132:-1:exon
so has part: feature:1496448-1496649:-1:exon
so has part: feature:1495789-1495953:-1:exon
so has part: feature:1495291-1495401:-1:exon
so has part: feature:1494631-1494714:-1:exon
so has part: feature:1490497-1490613:-1:exon
so has part: feature:1489659-1489724:-1:exon
so has part: feature:1489269-1489360:-1:exon
so has part: feature:1488735-1488885:-1:exon
so has part: feature:1487864-1487991:-1:exon
so has part: feature:1485512-1485608:-1:exon
so has part: feature:1479407-1479512:-1:exon
so has part: feature:1478505-1478612:-1:exon
so has part: feature:1475893-1475996:-1:exon
so has part: feature:1473683-1473795:-1:exon
so has part: feature:1473006-1473129:-1:exon
so has part: feature:1471784-1471897:-1:exon
so has part: feature:1466199-1466412:-1:exon
so has part: feature:1459754-1460004:-1:exon
so has part: feature:1457396-1458187:-1:exon

XP_042559569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1612424-1612824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1576400-1576663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1543048-1543153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1542375-1542514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1525577-1525668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525022-1525174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1524238-1524425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1521281-1521384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1519836-1519951:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1519160-1519210:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1518632-1518715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1517741-1517950:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1516649-1516761:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1516099-1516211:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1515522-1515653:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1515054-1515126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1514683-1514800:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1514174-1514241:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1513625-1513731:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1510114-1510246:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1509344-1509876:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1508549-1508883:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1507535-1507676:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1506730-1506859:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1506003-1506062:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1505249-1505355:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1498019-1498118:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1497608-1497768:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1496992-1497132:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1496448-1496649:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1495789-1495953:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1495291-1495401:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1494631-1494714:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1490497-1490613:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1489659-1489724:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1489269-1489360:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1488735-1488885:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1487864-1487991:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1485512-1485608:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1479407-1479512:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1478505-1478612:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1475893-1475996:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1473683-1473795:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1473006-1473129:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1471784-1471897:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1466199-1466412:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1459754-1460004:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1457396-1458187:-1:exon

cacna1ab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: cacna1ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X9
translation: MLSPLCSDGSVIVERAPARWPPQGSSSQRRRPGHFPPPTSGSSVCANPTYYHAVYDVRVEQCREAPPFAFGRRDSGAGGGTGASLYSLVSAGGDALPAPPIRRRGGLVEHRDVIKAHQSHKLQSTPQALRKEWEMARFGDEVPARYGGGGPSQGGPGRGGSRQGGPPAPRVYKQSMAQRARTMALYNPIPVRQSCLTVNRSLFIFSEDNFVRKYAKKITEWPPFEWMILTTIIANCIVLALEQHLPDGDKTPLSERLDDTEPYFIAIFCFESGIKILALGFAFHKGSYLRSGWNVMDFVVVMTGILSTVGSEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFVAILMFAIIGLEFYMGKFHKTCFNNITREIYDKQPCGEALPARLCPEGTVCREYWIGPNYGITQFDNILFAVLTVFQCITMEGWTDMLYYSNDTSGSAYNWMYFVPLIIIGSFFMLNLVLGVLSGEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEDDKNPGNTYDAKRRPTLKKTKTDLLNSEQGADHMGDAVGSPFARGSLKNGKGGDATPFDKRERRLRFFIRKIVKTQAFYWTVLSLVGLNTMCVAAVHYDQPDLLSDFLFYAEFIFLGLFMSEMLIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWALIKPGTSFGISVLRALRLLRIFKVTKYWAPLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDGTPSTNFDTFPAAIMTVFQVLTGEDWNMVMYDGIESQGGVNTGMVFSIFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEETAATNQKIAIQKAKEVAEVSPLSAANLSIAAKEQQKNSKLPKSVWEARTAEIRRQNLMTSREALYNELDAEDAWKTNFRQNRADVKTHLDRPLVVNPQENRNNNTNKPRPGEPPEQALDHSQPCLQQPARHPGGRTGPGGGAGPGAGGLNLAHSLQSLQEEAEEMEEEGGGGGGGGGRRHHHHHHPHHHRHQHRGEGSEGSEQPRRAKQHRRRAAEAGEGEDGNAGGQERRHRRRRHDNTDGCREKCRQHRRKESGLSTSRPIHQALSRQDSQYSEDLDNLRNSSKLFLDQDPEGDLDSEPFYSHSHPERANNLLNLRGPGGRELQPGGGGGGGSSLILFDLSKAPLEHTAIHMPPLYPNAIMQVNKNANTEGNKKDEEKKEEEDDDEGDGDGKPKPMPPFSSCFIMSTTNPFRKCCHYILTLRYFEMCILSVIAMSSIALAAEDPVRPDSAQNNVLRYFDYVFTGVFTFEMLIKMVVLGLFLHQGAYFRDLWNILDFIVVSGALVAFAFTSQTRGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFFCTDESKEFERDCRGEYLVYNGNDEVKAQKREWKKYDFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERACIDFAINAKPLTRHMPKNKQSFQYRMWQFVVSPPFEYSIMSLIALNTVVLMMKYNDAPDAYDKVLKNLNIVFTTLFFTECVLKIIAFGILNYFMDAWNIFDFVSVLGSVTDIIVTEFVNNFINLSFLRLFRAARLIKLLRQQETIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGNVDLDEENAINEHNNFRTFIMALMLLFRSATGEAWHDIMLACLGGMPCDPETGNPNPECGSNISYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVIDPPLGLGKKCPHRVACKRLLRMDLPVAEDNSVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMMAIWPNLSQKHLDLLVTPHKSATDLTVGKIYAAMMIMEYYRQSKAKKLQ…
SIO_010081: cacna1ab
subclass of: SO_0000673
so part of: cacna1ab
location: complement(join(1457396..1458187,1459754..1460004,1466199..1466412,1471784..1471897,1473006..1473129,1473683..1473795,1475893..1475996,1478505..1478612,1479407..1479512,1485512..1485608,1487864..1487991,1488735..1488885,1489269..1489360,1489659..1489724,1490497..1490613,1494631..1494714,1495291..1495401,1495789..1495953,1496448..1496649,1496992..1497132,1497608..1497768,1498019..1498118,1499625..1499636,1505249..1505355,1506003..1506062,1506730..1506859,1507535..1507676,1508549..1508883,1509344..1509876,1510114..1510246,1513625..1513731,1514174..1514241,1514683..1514800,1515054..1515126,1515522..1515653,1516099..1516211,1516649..1516761,1517741..1517950,1518632..1518715,1519160..1519210,1519836..1519951,1521281..1521384,1524238..1524425,1525022..1525174,1525577..1525668,1542375..1542514,1543048..1543153,1576400..1576663,1612424..1612824))
location: region:1457396-1612824:-1
so has part: feature:1612424-1612824:-1:exon
so has part: feature:1576400-1576663:-1:exon
so has part: feature:1543048-1543153:-1:exon
so has part: feature:1542375-1542514:-1:exon
so has part: feature:1525577-1525668:-1:exon
so has part: feature:1525022-1525174:-1:exon
so has part: feature:1524238-1524425:-1:exon
so has part: feature:1521281-1521384:-1:exon
so has part: feature:1519836-1519951:-1:exon
so has part: feature:1519160-1519210:-1:exon
so has part: feature:1518632-1518715:-1:exon
so has part: feature:1517741-1517950:-1:exon
so has part: feature:1516649-1516761:-1:exon
so has part: feature:1516099-1516211:-1:exon
so has part: feature:1515522-1515653:-1:exon
so has part: feature:1515054-1515126:-1:exon
so has part: feature:1514683-1514800:-1:exon
so has part: feature:1514174-1514241:-1:exon
so has part: feature:1513625-1513731:-1:exon
so has part: feature:1510114-1510246:-1:exon
so has part: feature:1509344-1509876:-1:exon
so has part: feature:1508549-1508883:-1:exon
so has part: feature:1507535-1507676:-1:exon
so has part: feature:1506730-1506859:-1:exon
so has part: feature:1506003-1506062:-1:exon
so has part: feature:1505249-1505355:-1:exon
so has part: feature:1499625-1499636:-1:exon
so has part: feature:1498019-1498118:-1:exon
so has part: feature:1497608-1497768:-1:exon
so has part: feature:1496992-1497132:-1:exon
so has part: feature:1496448-1496649:-1:exon
so has part: feature:1495789-1495953:-1:exon
so has part: feature:1495291-1495401:-1:exon
so has part: feature:1494631-1494714:-1:exon
so has part: feature:1490497-1490613:-1:exon
so has part: feature:1489659-1489724:-1:exon
so has part: feature:1489269-1489360:-1:exon
so has part: feature:1488735-1488885:-1:exon
so has part: feature:1487864-1487991:-1:exon
so has part: feature:1485512-1485608:-1:exon
so has part: feature:1479407-1479512:-1:exon
so has part: feature:1478505-1478612:-1:exon
so has part: feature:1475893-1475996:-1:exon
so has part: feature:1473683-1473795:-1:exon
so has part: feature:1473006-1473129:-1:exon
so has part: feature:1471784-1471897:-1:exon
so has part: feature:1466199-1466412:-1:exon
so has part: feature:1459754-1460004:-1:exon
so has part: feature:1457396-1458187:-1:exon

XP_042559568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1612424-1612824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1576400-1576663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1543048-1543153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1542375-1542514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1525577-1525668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525022-1525174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1524238-1524425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1521281-1521384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1519836-1519951:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1519160-1519210:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1518632-1518715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1517741-1517950:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1516649-1516761:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1516099-1516211:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1515522-1515653:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1515054-1515126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1514683-1514800:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1514174-1514241:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1513625-1513731:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1510114-1510246:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1509344-1509876:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1508549-1508883:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1507535-1507676:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1506730-1506859:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1506003-1506062:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1505249-1505355:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1499625-1499636:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1498019-1498118:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1497608-1497768:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1496992-1497132:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1496448-1496649:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1495789-1495953:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1495291-1495401:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1494631-1494714:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1490497-1490613:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1489659-1489724:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1489269-1489360:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1488735-1488885:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1487864-1487991:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1485512-1485608:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1479407-1479512:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1478505-1478612:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1475893-1475996:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1473683-1473795:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1473006-1473129:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1471784-1471897:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1466199-1466412:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1459754-1460004:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1457396-1458187:-1:exon

cacna1ab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: cacna1ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X7
translation: MLSPLCSDGSVIVERAPARWPPQGSSSQRRRPGHFPPPTSGSSVCANPTYYHAVYDVRVEQCREAPPFAFGRRDSGAGGGTGASLYSLVSAGGDALPAPPIRRRGGLVEHRDVIKAHQSHKLQSTPQALRKEWEMARFGDEVPARYGGGGPSQGGPGRGGSRQGGPPAPRVYKQSMAQRARTMALYNPIPVRQSCLTVNRSLFIFSEDNFVRKYAKKITEWPPFEWMILTTIIANCIVLALEQHLPDGDKTPLSERLDDTEPYFIAIFCFESGIKILALGFAFHKGSYLRSGWNVMDFVVVMTGILSTVGSEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFVAILMFAIIGLEFYMGKFHKTCFNNITREIYDKQPCGEALPARLCPEGTVCREYWIGPNYGITQFDNILFAVLTVFQCITMEGWTDMLYYSNDTSGSAYNWMYFVPLIIIGSFFMLNLVLGVLSGEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEDDKNPGNTYDAKRRPTLKKTKTDLLNSEQGADHMGDAVGSPFARGSLKNGKGGDATPFDKRERRLRFFIRKIVKTQAFYWTVLSLVGLNTMCVAAVHYDQPDLLSDFLFYAEFIFLGLFMSEMLIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWALIKPGTSFGISVLRALRLLRIFKVTKYWAPLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDGTPSTNFDTFPAAIMTVFQVLTGEDWNMVMYDGIESQGGVNTGMVFSIFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEETAATNQKIAIQKAKEVAEVSPLSAANLSIAAVTVKSERIDATESVLDCKEQQKNSKLPKSVWEARTAEIRRQNLMTSREALYNELDAEDAWKTNFRQNRADVKTHLDRPLVVNPQENRNNNTNKPRPGEPPEQALDHSQPCLQQPARHPGGRTGPGGGAGPGAGGLNLAHSLQSLQEEAEEMEEEGGGGGGGGGRRHHHHHHPHHHRHQHRGEGSEGSEQPRRAKQHRRRAAEAGEGEDGNAGGQERRHRRRRHDNTDGCREKCRQHRRKESGLSTSRPIHQALSRQDSQYSEDLDNLRNSSKLFLDQDPEGDLDSEPFYSHSHPERANNLLNLRGPGGRELQPGGGGGGGSSLILFDLSKAPLEHTAIHMPPLYPNAIMQVNKNANTEGNKKDEEKKEEEDDDEGDGDGKPKPMPPFSSCFIMSTTNPFRKCCHYILTLRYFEMCILSVIAMSSIALAAEDPVRPDSAQNNVLRYFDYVFTGVFTFEMLIKMVVLGLFLHQGAYFRDLWNILDFIVVSGALVAFAFTGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFFCTDESKEFERDCRGEYLVYNGNDEVKAQKREWKKYDFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERACIDFAINAKPLTRHMPKNKQSFQYRMWQFVVSPPFEYSIMSLIALNTVVLMMKYNDAPDAYDKVLKNLNIVFTTLFFTECVLKIIAFGILNYFMDAWNIFDFVSVLGSVTDIIVTEFVNNFINLSFLRLFRAARLIKLLRQQETIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGNVDLDEENAINEHNNFRTFIMALMLLFRSATGEAWHDIMLACLGGMPCDPETGNPNPECGSNISYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRISYSDMYQMLRHMCPPLGLGKRCPARVAYKRLLRMDLPVAEDNSVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMMAIWPNLSQKHLDLLVTPHKSTDLTVGKIYAAMMIM…
SIO_010081: cacna1ab
subclass of: SO_0000673
so part of: cacna1ab
location: complement(join(1457396..1458187,1459754..1460004,1466199..1466412,1471784..1471897,1473006..1473129,1473683..1473795,1475893..1475993,1478505..1478612,1479407..1479512,1483961..1484057,1487864..1487991,1488735..1488885,1489269..1489360,1489659..1489724,1490497..1490613,1494631..1494714,1495291..1495401,1495789..1495953,1496448..1496649,1496992..1497132,1497608..1497768,1498019..1498118,1505249..1505355,1506003..1506062,1506730..1506859,1507535..1507676,1508549..1508883,1509344..1509876,1510114..1510246,1512257..1512307,1513625..1513731,1514174..1514241,1514683..1514800,1515054..1515126,1515522..1515653,1516099..1516211,1516649..1516761,1517741..1517950,1518632..1518715,1519160..1519210,1519836..1519951,1521281..1521384,1524238..1524425,1525022..1525174,1525577..1525668,1542375..1542514,1543048..1543153,1576400..1576663,1612424..1612824))
location: region:1457396-1612824:-1
so has part: feature:1612424-1612824:-1:exon
so has part: feature:1576400-1576663:-1:exon
so has part: feature:1543048-1543153:-1:exon
so has part: feature:1542375-1542514:-1:exon
so has part: feature:1525577-1525668:-1:exon
so has part: feature:1525022-1525174:-1:exon
so has part: feature:1524238-1524425:-1:exon
so has part: feature:1521281-1521384:-1:exon
so has part: feature:1519836-1519951:-1:exon
so has part: feature:1519160-1519210:-1:exon
so has part: feature:1518632-1518715:-1:exon
so has part: feature:1517741-1517950:-1:exon
so has part: feature:1516649-1516761:-1:exon
so has part: feature:1516099-1516211:-1:exon
so has part: feature:1515522-1515653:-1:exon
so has part: feature:1515054-1515126:-1:exon
so has part: feature:1514683-1514800:-1:exon
so has part: feature:1514174-1514241:-1:exon
so has part: feature:1513625-1513731:-1:exon
so has part: feature:1512257-1512307:-1:exon
so has part: feature:1510114-1510246:-1:exon
so has part: feature:1509344-1509876:-1:exon
so has part: feature:1508549-1508883:-1:exon
so has part: feature:1507535-1507676:-1:exon
so has part: feature:1506730-1506859:-1:exon
so has part: feature:1506003-1506062:-1:exon
so has part: feature:1505249-1505355:-1:exon
so has part: feature:1498019-1498118:-1:exon
so has part: feature:1497608-1497768:-1:exon
so has part: feature:1496992-1497132:-1:exon
so has part: feature:1496448-1496649:-1:exon
so has part: feature:1495789-1495953:-1:exon
so has part: feature:1495291-1495401:-1:exon
so has part: feature:1494631-1494714:-1:exon
so has part: feature:1490497-1490613:-1:exon
so has part: feature:1489659-1489724:-1:exon
so has part: feature:1489269-1489360:-1:exon
so has part: feature:1488735-1488885:-1:exon
so has part: feature:1487864-1487991:-1:exon
so has part: feature:1483961-1484057:-1:exon
so has part: feature:1479407-1479512:-1:exon
so has part: feature:1478505-1478612:-1:exon
so has part: feature:1475893-1475993:-1:exon
so has part: feature:1473683-1473795:-1:exon
so has part: feature:1473006-1473129:-1:exon
so has part: feature:1471784-1471897:-1:exon
so has part: feature:1466199-1466412:-1:exon
so has part: feature:1459754-1460004:-1:exon
so has part: feature:1457396-1458187:-1:exon

XP_042559566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1612424-1612824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1576400-1576663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1543048-1543153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1542375-1542514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1525577-1525668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525022-1525174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1524238-1524425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1521281-1521384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1519836-1519951:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1519160-1519210:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1518632-1518715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1517741-1517950:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1516649-1516761:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1516099-1516211:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1515522-1515653:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1515054-1515126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1514683-1514800:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1514174-1514241:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1513625-1513731:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1512257-1512307:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1510114-1510246:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1509344-1509876:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1508549-1508883:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1507535-1507676:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1506730-1506859:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1506003-1506062:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1505249-1505355:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1498019-1498118:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1497608-1497768:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1496992-1497132:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1496448-1496649:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1495789-1495953:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1495291-1495401:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1494631-1494714:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1490497-1490613:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1489659-1489724:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1489269-1489360:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1488735-1488885:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1487864-1487991:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1483961-1484057:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1479407-1479512:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1478505-1478612:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1475893-1475993:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1473683-1473795:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1473006-1473129:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1471784-1471897:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1466199-1466412:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1459754-1460004:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1457396-1458187:-1:exon

cacna1ab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: cacna1ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X5
translation: MLSPLCSDGSVIVERAPARWPPQGSSSQRRRPGHFPPPTSGSSVCANPTYYHAVYDVRVEQCREAPPFAFGRRDSGAGGGTGASLYSLVSAGGDALPAPPIRRRGGLVEHRDVIKAHQSHKLQSTPQALRKEWEMARFGDEVPARYGGGGPSQGGPGRGGSRQGGPPAPRVYKQSMAQRARTMALYNPIPVRQSCLTVNRSLFIFSEDNFVRKYAKKITEWPPFEWMILTTIIANCIVLALEQHLPDGDKTPLSERLDDTEPYFIAIFCFESGIKILALGFAFHKGSYLRSGWNVMDFVVVMTGILSTVGSEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFVAILMFAIIGLEFYMGKFHKTCFNNITREIYDKQPCGEALPARLCPEGTVCREYWIGPNYGITQFDNILFAVLTVFQCITMEGWTDMLYYSNDTSGSAYNWMYFVPLIIIGSFFMLNLVLGVLSGEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEDDKNPGNTYDAKRRPTLKKTKTDLLNSEQGADHMGDAVGSPFARGSLKNGKGGDATPFDKRERRLRFFIRKIVKTQAFYWTVLSLVGLNTMCVAAVHYDQPDLLSDFLFYAEFIFLGLFMSEMLIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWALIKPGTSFGISVLRALRLLRIFKVTKYWAPLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDGTPSTNFDTFPAAIMTVFQVLTGEDWNMVMYDGIESQGGVNTGMVFSIFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEETAATNQKIAIQKAKEVAEVSPLSAANLSIAAVTVKSERIDATESVLDCKEQQKNSKLPKSVWEARTAEIRRQNLMTSREALYNELDAEDAWKTNFRQNRADVKTHLDRPLVVNPQENRNNNTNKPRPGEPPEQALDHSQPCLQQPARHPGGRTGPGGGAGPGAGGLNLAHSLQSLQEEAEEMEEEGGGGGGGGGRRHHHHHHPHHHRHQHRGEGSEGSEQPRRAKQHRRRAAEAGEGEDGNAGGQERRHRRRRHDNTDGCREKCRQHRRKESGLSTSRPIHQALSRQDSQYSEDLDNLRNSSKLFLDQDPEGDLDSEPFYSHSHPERANNLLNLRGPGGRELQPGGGGGGGSSLILFDLSKAPLEHTAIHMPPLYPNAIMQVNKNANTEGNKKDEEKKEEEDDDEGDGDGKPKPMPPFSSCFIMSTTNPFRKCCHYILTLRYFEMCILSVIAMSSIALAAEDPVRPDSAQNNVLRYFDYVFTGVFTFEMLIKMVVLGLFLHQGAYFRDLWNILDFIVVSGALVAFAFTGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFFCTDESKEFERDCRGEYLVYNGNDEVKAQKREWKKYDFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERACIDFAINAKPLTRHMPKNKQSFQYRMWQFVVSPPFEYSIMSLIALNTVVLMMKYNDAPDAYDKVLKNLNIVFTTLFFTECVLKIIAFGILNYFMDAWNIFDFVSVLGSVTDIIVTEFVNNFINLSFLRLFRAARLIKLLRQQETIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGNVDLDEENAINEHNNFRTFIMALMLLFRSATGEAWHDIMLACLGGMPCDPETGNPNPECGSNISYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRISYSDMYQMLRHMCPPLGLGKRCPARVAYKRLLRMDLPVAEDNSVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMMAIWPNLSQKHLDLLVTPHKSATDLTVGKIYAAMMI…
SIO_010081: cacna1ab
subclass of: SO_0000673
so part of: cacna1ab
location: complement(join(1457396..1458187,1459754..1460004,1466199..1466412,1471784..1471897,1473006..1473129,1473683..1473795,1475893..1475996,1478505..1478612,1479407..1479512,1483961..1484057,1487864..1487991,1488735..1488885,1489269..1489360,1489659..1489724,1490497..1490613,1494631..1494714,1495291..1495401,1495789..1495953,1496448..1496649,1496992..1497132,1497608..1497768,1498019..1498118,1505249..1505355,1506003..1506062,1506730..1506859,1507535..1507676,1508549..1508883,1509344..1509876,1510114..1510246,1512257..1512307,1513625..1513731,1514174..1514241,1514683..1514800,1515054..1515126,1515522..1515653,1516099..1516211,1516649..1516761,1517741..1517950,1518632..1518715,1519160..1519210,1519836..1519951,1521281..1521384,1524238..1524425,1525022..1525174,1525577..1525668,1542375..1542514,1543048..1543153,1576400..1576663,1612424..1612824))
location: region:1457396-1612824:-1
so has part: feature:1612424-1612824:-1:exon
so has part: feature:1576400-1576663:-1:exon
so has part: feature:1543048-1543153:-1:exon
so has part: feature:1542375-1542514:-1:exon
so has part: feature:1525577-1525668:-1:exon
so has part: feature:1525022-1525174:-1:exon
so has part: feature:1524238-1524425:-1:exon
so has part: feature:1521281-1521384:-1:exon
so has part: feature:1519836-1519951:-1:exon
so has part: feature:1519160-1519210:-1:exon
so has part: feature:1518632-1518715:-1:exon
so has part: feature:1517741-1517950:-1:exon
so has part: feature:1516649-1516761:-1:exon
so has part: feature:1516099-1516211:-1:exon
so has part: feature:1515522-1515653:-1:exon
so has part: feature:1515054-1515126:-1:exon
so has part: feature:1514683-1514800:-1:exon
so has part: feature:1514174-1514241:-1:exon
so has part: feature:1513625-1513731:-1:exon
so has part: feature:1512257-1512307:-1:exon
so has part: feature:1510114-1510246:-1:exon
so has part: feature:1509344-1509876:-1:exon
so has part: feature:1508549-1508883:-1:exon
so has part: feature:1507535-1507676:-1:exon
so has part: feature:1506730-1506859:-1:exon
so has part: feature:1506003-1506062:-1:exon
so has part: feature:1505249-1505355:-1:exon
so has part: feature:1498019-1498118:-1:exon
so has part: feature:1497608-1497768:-1:exon
so has part: feature:1496992-1497132:-1:exon
so has part: feature:1496448-1496649:-1:exon
so has part: feature:1495789-1495953:-1:exon
so has part: feature:1495291-1495401:-1:exon
so has part: feature:1494631-1494714:-1:exon
so has part: feature:1490497-1490613:-1:exon
so has part: feature:1489659-1489724:-1:exon
so has part: feature:1489269-1489360:-1:exon
so has part: feature:1488735-1488885:-1:exon
so has part: feature:1487864-1487991:-1:exon
so has part: feature:1483961-1484057:-1:exon
so has part: feature:1479407-1479512:-1:exon
so has part: feature:1478505-1478612:-1:exon
so has part: feature:1475893-1475996:-1:exon
so has part: feature:1473683-1473795:-1:exon
so has part: feature:1473006-1473129:-1:exon
so has part: feature:1471784-1471897:-1:exon
so has part: feature:1466199-1466412:-1:exon
so has part: feature:1459754-1460004:-1:exon
so has part: feature:1457396-1458187:-1:exon

XP_042559564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1612424-1612824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1576400-1576663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1543048-1543153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1542375-1542514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1525577-1525668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525022-1525174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1524238-1524425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1521281-1521384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1519836-1519951:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1519160-1519210:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1518632-1518715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1517741-1517950:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1516649-1516761:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1516099-1516211:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1515522-1515653:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1515054-1515126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1514683-1514800:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1514174-1514241:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1513625-1513731:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1512257-1512307:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1510114-1510246:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1509344-1509876:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1508549-1508883:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1507535-1507676:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1506730-1506859:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1506003-1506062:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1505249-1505355:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1498019-1498118:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1497608-1497768:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1496992-1497132:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1496448-1496649:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1495789-1495953:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1495291-1495401:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1494631-1494714:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1490497-1490613:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1489659-1489724:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1489269-1489360:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1488735-1488885:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1487864-1487991:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1483961-1484057:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1479407-1479512:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1478505-1478612:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1475893-1475996:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1473683-1473795:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1473006-1473129:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1471784-1471897:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1466199-1466412:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1459754-1460004:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1457396-1458187:-1:exon

cacna1ab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: cacna1ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X6
translation: MLSPLCSDGSVIVERAPARWPPQGSSSQRRRPGHFPPPTSGSSVCANPTYYHAVYDVRVEQCREAPPFAFGRRDSGAGGGTGASLYSLVSAGGDALPAPPIRRRGGLVEHRDVIKAHQSHKLQSTPQALRKEWEMARFGDEVPARYGGGGPSQGGPGRGGSRQGGPPAPRVYKQSMAQRARTMALYNPIPVRQSCLTVNRSLFIFSEDNFVRKYAKKITEWPPFEWMILTTIIANCIVLALEQHLPDGDKTPLSERLDDTEPYFIAIFCFESGIKILALGFAFHKGSYLRSGWNVMDFVVVMTGILSTVGSEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFVAILMFAIIGLEFYMGKFHKTCFNNITREIYDKQPCGEALPARLCPEGTVCREYWIGPNYGITQFDNILFAVLTVFQCITMEGWTDMLYYSNDTSGSAYNWMYFVPLIIIGSFFMLNLVLGVLSGEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEDDKNPGNTYDAKRRPTLKKTKTDLLNSEQGADHMGDAVGSPFARGSLKNGKGGDATPFDKRERRLRFFIRKIVKTQAFYWTVLSLVGLNTMCVAAVHYDQPDLLSDFLFYAEFIFLGLFMSEMLIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWALIKPGTSFGISVLRALRLLRIFKVTKYWAPLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDGTPSTNFDTFPAAIMTVFQVLTGEDWNMVMYDGIESQGGVNTGMVFSIFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEETAATNQKIAIQKAKEVAEVSPLSAANLSIAAVTVKSERIDATESVLDCKEQQKNSKLPKSVWEARTAEIRRQNLMTSREALYNELDAEDAWKTNFRQNRADVKTHLDRPLVVNPQENRNNNTNKPRPGEPPEQALDHSQPCLQQPARHPGGRTGPGGGAGPGAGGLNLAHSLQSLQEEAEEMEEEGGGGGGGGGRRHHHHHHPHHHRHQHRGEGSEGSEQPRRAKQHRRRAAEAGEGEDGNAGGQERRHRRRRHDNTDGCREKCRQHRRKESGLSTSRPIHQALSRQDSQYSEDLDNLRNSSKLFLDQDPEGDLDSEPFYSHSHPERANNLLNLRGPGGRELQPGGGGGGGSSLILFDLSKAPLEHTAIHMPPLYPNAIMQVNKNANTEGNKKDEEKKEEEDDDEGDGDGKPKPMPPFSSCFIMSTTNPFRKCCHYILTLRYFEMCILSVIAMSSIALAAEDPVRPDSAQNNVLRYFDYVFTGVFTFEMLIKMVVLGLFLHQGAYFRDLWNILDFIVVSGALVAFAFTGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFFCTDESKEFERDCRGEYLVYNGNDEVKAQKREWKKYDFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERACIDFAINAKPLTRHMPKNKQSFQYRMWQFVVSPPFEYSIMSLIALNTVVLMMKYNDAPDAYDKVLKNLNIVFTTLFFTECVLKIIAFGILNYFMDAWNIFDFVSVLGSVTDIIVTEFVNNFINLSFLRLFRAARLIKLLRQQETIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGNVDLDEENAINEHNNFRTFIMALMLLFRSATGEAWHDIMLACLGGMPCDPETGNPNPECGSNISYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVIDPPLGLGKKCPHRVACKRLLRMDLPVAEDNSVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMMAIWPNLSQKHLDLLVTPHKSTDLTVGKIYAAMMIM…
SIO_010081: cacna1ab
subclass of: SO_0000673
so part of: cacna1ab
location: complement(join(1457396..1458187,1459754..1460004,1466199..1466412,1471784..1471897,1473006..1473129,1473683..1473795,1475893..1475993,1478505..1478612,1479407..1479512,1485512..1485608,1487864..1487991,1488735..1488885,1489269..1489360,1489659..1489724,1490497..1490613,1494631..1494714,1495291..1495401,1495789..1495953,1496448..1496649,1496992..1497132,1497608..1497768,1498019..1498118,1505249..1505355,1506003..1506062,1506730..1506859,1507535..1507676,1508549..1508883,1509344..1509876,1510114..1510246,1512257..1512307,1513625..1513731,1514174..1514241,1514683..1514800,1515054..1515126,1515522..1515653,1516099..1516211,1516649..1516761,1517741..1517950,1518632..1518715,1519160..1519210,1519836..1519951,1521281..1521384,1524238..1524425,1525022..1525174,1525577..1525668,1542375..1542514,1543048..1543153,1576400..1576663,1612424..1612824))
location: region:1457396-1612824:-1
so has part: feature:1612424-1612824:-1:exon
so has part: feature:1576400-1576663:-1:exon
so has part: feature:1543048-1543153:-1:exon
so has part: feature:1542375-1542514:-1:exon
so has part: feature:1525577-1525668:-1:exon
so has part: feature:1525022-1525174:-1:exon
so has part: feature:1524238-1524425:-1:exon
so has part: feature:1521281-1521384:-1:exon
so has part: feature:1519836-1519951:-1:exon
so has part: feature:1519160-1519210:-1:exon
so has part: feature:1518632-1518715:-1:exon
so has part: feature:1517741-1517950:-1:exon
so has part: feature:1516649-1516761:-1:exon
so has part: feature:1516099-1516211:-1:exon
so has part: feature:1515522-1515653:-1:exon
so has part: feature:1515054-1515126:-1:exon
so has part: feature:1514683-1514800:-1:exon
so has part: feature:1514174-1514241:-1:exon
so has part: feature:1513625-1513731:-1:exon
so has part: feature:1512257-1512307:-1:exon
so has part: feature:1510114-1510246:-1:exon
so has part: feature:1509344-1509876:-1:exon
so has part: feature:1508549-1508883:-1:exon
so has part: feature:1507535-1507676:-1:exon
so has part: feature:1506730-1506859:-1:exon
so has part: feature:1506003-1506062:-1:exon
so has part: feature:1505249-1505355:-1:exon
so has part: feature:1498019-1498118:-1:exon
so has part: feature:1497608-1497768:-1:exon
so has part: feature:1496992-1497132:-1:exon
so has part: feature:1496448-1496649:-1:exon
so has part: feature:1495789-1495953:-1:exon
so has part: feature:1495291-1495401:-1:exon
so has part: feature:1494631-1494714:-1:exon
so has part: feature:1490497-1490613:-1:exon
so has part: feature:1489659-1489724:-1:exon
so has part: feature:1489269-1489360:-1:exon
so has part: feature:1488735-1488885:-1:exon
so has part: feature:1487864-1487991:-1:exon
so has part: feature:1485512-1485608:-1:exon
so has part: feature:1479407-1479512:-1:exon
so has part: feature:1478505-1478612:-1:exon
so has part: feature:1475893-1475993:-1:exon
so has part: feature:1473683-1473795:-1:exon
so has part: feature:1473006-1473129:-1:exon
so has part: feature:1471784-1471897:-1:exon
so has part: feature:1466199-1466412:-1:exon
so has part: feature:1459754-1460004:-1:exon
so has part: feature:1457396-1458187:-1:exon

XP_042559565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1612424-1612824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1576400-1576663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1543048-1543153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1542375-1542514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1525577-1525668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525022-1525174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1524238-1524425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1521281-1521384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1519836-1519951:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1519160-1519210:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1518632-1518715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1517741-1517950:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1516649-1516761:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1516099-1516211:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1515522-1515653:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1515054-1515126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1514683-1514800:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1514174-1514241:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1513625-1513731:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1512257-1512307:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1510114-1510246:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1509344-1509876:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1508549-1508883:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1507535-1507676:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1506730-1506859:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1506003-1506062:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1505249-1505355:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1498019-1498118:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1497608-1497768:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1496992-1497132:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1496448-1496649:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1495789-1495953:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1495291-1495401:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1494631-1494714:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1490497-1490613:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1489659-1489724:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1489269-1489360:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1488735-1488885:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1487864-1487991:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1485512-1485608:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1479407-1479512:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1478505-1478612:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1475893-1475993:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1473683-1473795:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1473006-1473129:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1471784-1471897:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1466199-1466412:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1459754-1460004:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1457396-1458187:-1:exon

cacna1ab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: cacna1ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X4
translation: MLSPLCSDGSVIVERAPARWPPQGSSSQRRRPGHFPPPTSGSSVCANPTYYHAVYDVRVEQCREAPPFAFGRRDSGAGGGTGASLYSLVSAGGDALPAPPIRRRGGLVEHRDVIKAHQSHKLQSTPQALRKEWEMARFGDEVPARYGGGGPSQGGPGRGGSRQGGPPAPRVYKQSMAQRARTMALYNPIPVRQSCLTVNRSLFIFSEDNFVRKYAKKITEWPPFEWMILTTIIANCIVLALEQHLPDGDKTPLSERLDDTEPYFIAIFCFESGIKILALGFAFHKGSYLRSGWNVMDFVVVMTGILSTVGSEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFVAILMFAIIGLEFYMGKFHKTCFNNITREIYDKQPCGEALPARLCPEGTVCREYWIGPNYGITQFDNILFAVLTVFQCITMEGWTDMLYYSNDTSGSAYNWMYFVPLIIIGSFFMLNLVLGVLSGEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEDDKNPGNTYDAKRRPTLKKTKTDLLNSEQGADHMGDAVGSPFARGSLKNGKGGDATPFDKRERRLRFFIRKIVKTQAFYWTVLSLVGLNTMCVAAVHYDQPDLLSDFLFYAEFIFLGLFMSEMLIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWALIKPGTSFGISVLRALRLLRIFKVTKYWAPLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDGTPSTNFDTFPAAIMTVFQVLTGEDWNMVMYDGIESQGGVNTGMVFSIFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEETAATNQKIAIQKAKEVAEVSPLSAANLSIAAVTVKSERIDATESVLDCKEQQKNSKLPKSVWEARTAEIRRQNLMTSREALYNELDAEDAWKTNFRQNRADVKTHLDRPLVVNPQENRNNNTNKPRPGEPPEQALDHSQPCLQQPARHPGGRTGPGGGAGPGAGGLNLAHSLQSLQEEAEEMEEEGGGGGGGGGRRHHHHHHPHHHRHQHRGEGSEGSEQPRRAKQHRRRAAEAGEGEDGNAGGQERRHRRRRHDNTDGCREKCRQHRRKESGLSTSRPIHQALSRQDSQYSEDLDNLRNSSKLFLDQDPEGDLDSEPFYSHSHPERANNLLNLRGPGGRELQPGGGGGGGSSLILFDLSKAPLEHTAIHMPPLYPNAIMQVNKNANTEGNKKDEEKKEEEDDDEGDGDGKPKPMPPFSSCFIMSTTNPFRKCCHYILTLRYFEMCILSVIAMSSIALAAEDPVRPDSAQNNVLRYFDYVFTGVFTFEMLIKMVVLGLFLHQGAYFRDLWNILDFIVVSGALVAFAFTGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFFCTDESKEFERDCRGEYLVYNGNDEVKAQKREWKKYDFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERACIDFAINAKPLTRHMPKNKQSFQYRMWQFVVSPPFEYSIMSLIALNTVVLMMKYNDAPDAYDKVLKNLNIVFTTLFFTECVLKIIAFGILNYFMDAWNIFDFVSVLGSVTDIIVTEFVNNFINLSFLRLFRAARLIKLLRQQETIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGNVDLDEENAINEHNNFRTFIMALMLLFRSATGEAWHDIMLACLGGMPCDPETGNPNPECGSNISYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVIDPPLGLGKKCPHRVACKRLLRMDLPVAEDNSVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMMAIWPNLSQKHLDLLVTPHKSATDLTVGKIYAAMMI…
SIO_010081: cacna1ab
subclass of: SO_0000673
so part of: cacna1ab
location: complement(join(1457396..1458187,1459754..1460004,1466199..1466412,1471784..1471897,1473006..1473129,1473683..1473795,1475893..1475996,1478505..1478612,1479407..1479512,1485512..1485608,1487864..1487991,1488735..1488885,1489269..1489360,1489659..1489724,1490497..1490613,1494631..1494714,1495291..1495401,1495789..1495953,1496448..1496649,1496992..1497132,1497608..1497768,1498019..1498118,1505249..1505355,1506003..1506062,1506730..1506859,1507535..1507676,1508549..1508883,1509344..1509876,1510114..1510246,1512257..1512307,1513625..1513731,1514174..1514241,1514683..1514800,1515054..1515126,1515522..1515653,1516099..1516211,1516649..1516761,1517741..1517950,1518632..1518715,1519160..1519210,1519836..1519951,1521281..1521384,1524238..1524425,1525022..1525174,1525577..1525668,1542375..1542514,1543048..1543153,1576400..1576663,1612424..1612824))
location: region:1457396-1612824:-1
so has part: feature:1612424-1612824:-1:exon
so has part: feature:1576400-1576663:-1:exon
so has part: feature:1543048-1543153:-1:exon
so has part: feature:1542375-1542514:-1:exon
so has part: feature:1525577-1525668:-1:exon
so has part: feature:1525022-1525174:-1:exon
so has part: feature:1524238-1524425:-1:exon
so has part: feature:1521281-1521384:-1:exon
so has part: feature:1519836-1519951:-1:exon
so has part: feature:1519160-1519210:-1:exon
so has part: feature:1518632-1518715:-1:exon
so has part: feature:1517741-1517950:-1:exon
so has part: feature:1516649-1516761:-1:exon
so has part: feature:1516099-1516211:-1:exon
so has part: feature:1515522-1515653:-1:exon
so has part: feature:1515054-1515126:-1:exon
so has part: feature:1514683-1514800:-1:exon
so has part: feature:1514174-1514241:-1:exon
so has part: feature:1513625-1513731:-1:exon
so has part: feature:1512257-1512307:-1:exon
so has part: feature:1510114-1510246:-1:exon
so has part: feature:1509344-1509876:-1:exon
so has part: feature:1508549-1508883:-1:exon
so has part: feature:1507535-1507676:-1:exon
so has part: feature:1506730-1506859:-1:exon
so has part: feature:1506003-1506062:-1:exon
so has part: feature:1505249-1505355:-1:exon
so has part: feature:1498019-1498118:-1:exon
so has part: feature:1497608-1497768:-1:exon
so has part: feature:1496992-1497132:-1:exon
so has part: feature:1496448-1496649:-1:exon
so has part: feature:1495789-1495953:-1:exon
so has part: feature:1495291-1495401:-1:exon
so has part: feature:1494631-1494714:-1:exon
so has part: feature:1490497-1490613:-1:exon
so has part: feature:1489659-1489724:-1:exon
so has part: feature:1489269-1489360:-1:exon
so has part: feature:1488735-1488885:-1:exon
so has part: feature:1487864-1487991:-1:exon
so has part: feature:1485512-1485608:-1:exon
so has part: feature:1479407-1479512:-1:exon
so has part: feature:1478505-1478612:-1:exon
so has part: feature:1475893-1475996:-1:exon
so has part: feature:1473683-1473795:-1:exon
so has part: feature:1473006-1473129:-1:exon
so has part: feature:1471784-1471897:-1:exon
so has part: feature:1466199-1466412:-1:exon
so has part: feature:1459754-1460004:-1:exon
so has part: feature:1457396-1458187:-1:exon

XP_042559563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1612424-1612824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1576400-1576663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1543048-1543153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1542375-1542514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1525577-1525668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525022-1525174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1524238-1524425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1521281-1521384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1519836-1519951:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1519160-1519210:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1518632-1518715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1517741-1517950:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1516649-1516761:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1516099-1516211:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1515522-1515653:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1515054-1515126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1514683-1514800:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1514174-1514241:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1513625-1513731:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1512257-1512307:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1510114-1510246:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1509344-1509876:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1508549-1508883:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1507535-1507676:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1506730-1506859:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1506003-1506062:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1505249-1505355:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1498019-1498118:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1497608-1497768:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1496992-1497132:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1496448-1496649:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1495789-1495953:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1495291-1495401:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1494631-1494714:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1490497-1490613:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1489659-1489724:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1489269-1489360:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1488735-1488885:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1487864-1487991:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1485512-1485608:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1479407-1479512:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1478505-1478612:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1475893-1475996:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1473683-1473795:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1473006-1473129:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1471784-1471897:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1466199-1466412:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1459754-1460004:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1457396-1458187:-1:exon

cacna1ab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: cacna1ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X3
translation: MLSPLCSDGSVIVERAPARWPPQGSSSQRRRPGHFPPPTSGSSVCANPTYYHAVYDVRVEQCREAPPFAFGRRDSGAGGGTGASLYSLVSAGGDALPAPPIRRRGGLVEHRDVIKAHQSHKLQSTPQALRKEWEMARFGDEVPARYGGGGPSQGGPGRGGSRQGGPPAPRVYKQSMAQRARTMALYNPIPVRQSCLTVNRSLFIFSEDNFVRKYAKKITEWPPFEWMILTTIIANCIVLALEQHLPDGDKTPLSERLDDTEPYFIAIFCFESGIKILALGFAFHKGSYLRSGWNVMDFVVVMTGILSTVGSEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFVAILMFAIIGLEFYMGKFHKTCFNNITREIYDKQPCGEALPARLCPEGTVCREYWIGPNYGITQFDNILFAVLTVFQCITMEGWTDMLYYSNDTSGSAYNWMYFVPLIIIGSFFMLNLVLGVLSGEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEDDKNPGNTYDAKRRPTLKKTKTDLLNSEQGADHMGDAVGSPFARGSLKNGKGGDATPFDKRERRLRFFIRKIVKTQAFYWTVLSLVGLNTMCVAAVHYDQPDLLSDFLFYAEFIFLGLFMSEMLIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWALIKPGTSFGISVLRALRLLRIFKVTKYWAPLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDGTPSTNFDTFPAAIMTVFQVLTGEDWNMVMYDGIESQGGVNTGMVFSIFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEETAATNQKIAIQKAKEVAEVSPLSAANLSIAAVTVKSERIDATESVLDCKEQQKNSKLPKSVWEARTAEIRRQNLMTSREALYNELDAEDAWKTNFRQNRADVKTHLDRPLVVNPQENRNNNTNKPRPGEPPEQALDHSQPCLQQPARHPGGRTGPGGGAGPGAGGLNLAHSLQSLQEEAEEMEEEGGGGGGGGGRRHHHHHHPHHHRHQHRGEGSEGSEQPRRAKQHRRRAAEAGEGEDGNAGGQERRHRRRRHDNTDGCREKCRQHRRKESGLSTSRPIHQALSRQDSQYSEDLDNLRNSSKLFLDQDPEGDLDSEPFYSHSHPERANNLLNLRGPGGRELQPGGGGGGGSSLILFDLSKAPLEHTAIHMPPLYPNAIMQVNKNANTEGNKKDEEKKEEEDDDEGDGDGKPKPMPPFSSCFIMSTTNPFRKCCHYILTLRYFEMCILSVIAMSSIALAAEDPVRPDSAQNNVLRYFDYVFTGVFTFEMLIKMVVLGLFLHQGAYFRDLWNILDFIVVSGALVAFAFTSQTRGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFFCTDESKEFERDCRGEYLVYNGNDEVKAQKREWKKYDFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERACIDFAINAKPLTRHMPKNKQSFQYRMWQFVVSPPFEYSIMSLIALNTVVLMMKYNDAPDAYDKVLKNLNIVFTTLFFTECVLKIIAFGILNYFMDAWNIFDFVSVLGSVTDIIVTEFVNNFINLSFLRLFRAARLIKLLRQQETIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGNVDLDEENAINEHNNFRTFIMALMLLFRSATGEAWHDIMLACLGGMPCDPETGNPNPECGSNISYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRISYSDMYQMLRHMCPPLGLGKRCPARVAYKRLLRMDLPVAEDNSVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMMAIWPNLSQKHLDLLVTPHKSTDLTVGKIYAA…
SIO_010081: cacna1ab
subclass of: SO_0000673
so part of: cacna1ab
location: complement(join(1457396..1458187,1459754..1460004,1466199..1466412,1471784..1471897,1473006..1473129,1473683..1473795,1475893..1475993,1478505..1478612,1479407..1479512,1483961..1484057,1487864..1487991,1488735..1488885,1489269..1489360,1489659..1489724,1490497..1490613,1494631..1494714,1495291..1495401,1495789..1495953,1496448..1496649,1496992..1497132,1497608..1497768,1498019..1498118,1499625..1499636,1505249..1505355,1506003..1506062,1506730..1506859,1507535..1507676,1508549..1508883,1509344..1509876,1510114..1510246,1512257..1512307,1513625..1513731,1514174..1514241,1514683..1514800,1515054..1515126,1515522..1515653,1516099..1516211,1516649..1516761,1517741..1517950,1518632..1518715,1519160..1519210,1519836..1519951,1521281..1521384,1524238..1524425,1525022..1525174,1525577..1525668,1542375..1542514,1543048..1543153,1576400..1576663,1612424..1612824))
location: region:1457396-1612824:-1
so has part: feature:1612424-1612824:-1:exon
so has part: feature:1576400-1576663:-1:exon
so has part: feature:1543048-1543153:-1:exon
so has part: feature:1542375-1542514:-1:exon
so has part: feature:1525577-1525668:-1:exon
so has part: feature:1525022-1525174:-1:exon
so has part: feature:1524238-1524425:-1:exon
so has part: feature:1521281-1521384:-1:exon
so has part: feature:1519836-1519951:-1:exon
so has part: feature:1519160-1519210:-1:exon
so has part: feature:1518632-1518715:-1:exon
so has part: feature:1517741-1517950:-1:exon
so has part: feature:1516649-1516761:-1:exon
so has part: feature:1516099-1516211:-1:exon
so has part: feature:1515522-1515653:-1:exon
so has part: feature:1515054-1515126:-1:exon
so has part: feature:1514683-1514800:-1:exon
so has part: feature:1514174-1514241:-1:exon
so has part: feature:1513625-1513731:-1:exon
so has part: feature:1512257-1512307:-1:exon
so has part: feature:1510114-1510246:-1:exon
so has part: feature:1509344-1509876:-1:exon
so has part: feature:1508549-1508883:-1:exon
so has part: feature:1507535-1507676:-1:exon
so has part: feature:1506730-1506859:-1:exon
so has part: feature:1506003-1506062:-1:exon
so has part: feature:1505249-1505355:-1:exon
so has part: feature:1499625-1499636:-1:exon
so has part: feature:1498019-1498118:-1:exon
so has part: feature:1497608-1497768:-1:exon
so has part: feature:1496992-1497132:-1:exon
so has part: feature:1496448-1496649:-1:exon
so has part: feature:1495789-1495953:-1:exon
so has part: feature:1495291-1495401:-1:exon
so has part: feature:1494631-1494714:-1:exon
so has part: feature:1490497-1490613:-1:exon
so has part: feature:1489659-1489724:-1:exon
so has part: feature:1489269-1489360:-1:exon
so has part: feature:1488735-1488885:-1:exon
so has part: feature:1487864-1487991:-1:exon
so has part: feature:1483961-1484057:-1:exon
so has part: feature:1479407-1479512:-1:exon
so has part: feature:1478505-1478612:-1:exon
so has part: feature:1475893-1475993:-1:exon
so has part: feature:1473683-1473795:-1:exon
so has part: feature:1473006-1473129:-1:exon
so has part: feature:1471784-1471897:-1:exon
so has part: feature:1466199-1466412:-1:exon
so has part: feature:1459754-1460004:-1:exon
so has part: feature:1457396-1458187:-1:exon

XP_042559562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1612424-1612824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1576400-1576663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1543048-1543153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1542375-1542514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1525577-1525668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525022-1525174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1524238-1524425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1521281-1521384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1519836-1519951:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1519160-1519210:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1518632-1518715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1517741-1517950:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1516649-1516761:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1516099-1516211:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1515522-1515653:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1515054-1515126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1514683-1514800:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1514174-1514241:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1513625-1513731:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1512257-1512307:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1510114-1510246:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1509344-1509876:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1508549-1508883:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1507535-1507676:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1506730-1506859:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1506003-1506062:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1505249-1505355:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1499625-1499636:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1498019-1498118:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1497608-1497768:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1496992-1497132:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1496448-1496649:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1495789-1495953:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1495291-1495401:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1494631-1494714:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1490497-1490613:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1489659-1489724:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1489269-1489360:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1488735-1488885:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1487864-1487991:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1483961-1484057:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1479407-1479512:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1478505-1478612:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1475893-1475993:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1473683-1473795:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1473006-1473129:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1471784-1471897:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1466199-1466412:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1459754-1460004:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1457396-1458187:-1:exon

cacna1ab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: cacna1ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X2
translation: MLSPLCSDGSVIVERAPARWPPQGSSSQRRRPGHFPPPTSGSSVCANPTYYHAVYDVRVEQCREAPPFAFGRRDSGAGGGTGASLYSLVSAGGDALPAPPIRRRGGLVEHRDVIKAHQSHKLQSTPQALRKEWEMARFGDEVPARYGGGGPSQGGPGRGGSRQGGPPAPRVYKQSMAQRARTMALYNPIPVRQSCLTVNRSLFIFSEDNFVRKYAKKITEWPPFEWMILTTIIANCIVLALEQHLPDGDKTPLSERLDDTEPYFIAIFCFESGIKILALGFAFHKGSYLRSGWNVMDFVVVMTGILSTVGSEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFVAILMFAIIGLEFYMGKFHKTCFNNITREIYDKQPCGEALPARLCPEGTVCREYWIGPNYGITQFDNILFAVLTVFQCITMEGWTDMLYYSNDTSGSAYNWMYFVPLIIIGSFFMLNLVLGVLSGEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEDDKNPGNTYDAKRRPTLKKTKTDLLNSEQGADHMGDAVGSPFARGSLKNGKGGDATPFDKRERRLRFFIRKIVKTQAFYWTVLSLVGLNTMCVAAVHYDQPDLLSDFLFYAEFIFLGLFMSEMLIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWALIKPGTSFGISVLRALRLLRIFKVTKYWAPLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDGTPSTNFDTFPAAIMTVFQVLTGEDWNMVMYDGIESQGGVNTGMVFSIFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEETAATNQKIAIQKAKEVAEVSPLSAANLSIAAVTVKSERIDATESVLDCKEQQKNSKLPKSVWEARTAEIRRQNLMTSREALYNELDAEDAWKTNFRQNRADVKTHLDRPLVVNPQENRNNNTNKPRPGEPPEQALDHSQPCLQQPARHPGGRTGPGGGAGPGAGGLNLAHSLQSLQEEAEEMEEEGGGGGGGGGRRHHHHHHPHHHRHQHRGEGSEGSEQPRRAKQHRRRAAEAGEGEDGNAGGQERRHRRRRHDNTDGCREKCRQHRRKESGLSTSRPIHQALSRQDSQYSEDLDNLRNSSKLFLDQDPEGDLDSEPFYSHSHPERANNLLNLRGPGGRELQPGGGGGGGSSLILFDLSKAPLEHTAIHMPPLYPNAIMQVNKNANTEGNKKDEEKKEEEDDDEGDGDGKPKPMPPFSSCFIMSTTNPFRKCCHYILTLRYFEMCILSVIAMSSIALAAEDPVRPDSAQNNVLRYFDYVFTGVFTFEMLIKMVVLGLFLHQGAYFRDLWNILDFIVVSGALVAFAFTSQTRGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFFCTDESKEFERDCRGEYLVYNGNDEVKAQKREWKKYDFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERACIDFAINAKPLTRHMPKNKQSFQYRMWQFVVSPPFEYSIMSLIALNTVVLMMKYNDAPDAYDKVLKNLNIVFTTLFFTECVLKIIAFGILNYFMDAWNIFDFVSVLGSVTDIIVTEFVNNFINLSFLRLFRAARLIKLLRQQETIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGNVDLDEENAINEHNNFRTFIMALMLLFRSATGEAWHDIMLACLGGMPCDPETGNPNPECGSNISYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRISYSDMYQMLRHMCPPLGLGKRCPARVAYKRLLRMDLPVAEDNSVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMMAIWPNLSQKHLDLLVTPHKSATDLTVGKIYA…
SIO_010081: cacna1ab
subclass of: SO_0000673
so part of: cacna1ab
location: complement(join(1457396..1458187,1459754..1460004,1466199..1466412,1471784..1471897,1473006..1473129,1473683..1473795,1475893..1475996,1478505..1478612,1479407..1479512,1483961..1484057,1487864..1487991,1488735..1488885,1489269..1489360,1489659..1489724,1490497..1490613,1494631..1494714,1495291..1495401,1495789..1495953,1496448..1496649,1496992..1497132,1497608..1497768,1498019..1498118,1499625..1499636,1505249..1505355,1506003..1506062,1506730..1506859,1507535..1507676,1508549..1508883,1509344..1509876,1510114..1510246,1512257..1512307,1513625..1513731,1514174..1514241,1514683..1514800,1515054..1515126,1515522..1515653,1516099..1516211,1516649..1516761,1517741..1517950,1518632..1518715,1519160..1519210,1519836..1519951,1521281..1521384,1524238..1524425,1525022..1525174,1525577..1525668,1542375..1542514,1543048..1543153,1576400..1576663,1612424..1612824))
location: region:1457396-1612824:-1
so has part: feature:1612424-1612824:-1:exon
so has part: feature:1576400-1576663:-1:exon
so has part: feature:1543048-1543153:-1:exon
so has part: feature:1542375-1542514:-1:exon
so has part: feature:1525577-1525668:-1:exon
so has part: feature:1525022-1525174:-1:exon
so has part: feature:1524238-1524425:-1:exon
so has part: feature:1521281-1521384:-1:exon
so has part: feature:1519836-1519951:-1:exon
so has part: feature:1519160-1519210:-1:exon
so has part: feature:1518632-1518715:-1:exon
so has part: feature:1517741-1517950:-1:exon
so has part: feature:1516649-1516761:-1:exon
so has part: feature:1516099-1516211:-1:exon
so has part: feature:1515522-1515653:-1:exon
so has part: feature:1515054-1515126:-1:exon
so has part: feature:1514683-1514800:-1:exon
so has part: feature:1514174-1514241:-1:exon
so has part: feature:1513625-1513731:-1:exon
so has part: feature:1512257-1512307:-1:exon
so has part: feature:1510114-1510246:-1:exon
so has part: feature:1509344-1509876:-1:exon
so has part: feature:1508549-1508883:-1:exon
so has part: feature:1507535-1507676:-1:exon
so has part: feature:1506730-1506859:-1:exon
so has part: feature:1506003-1506062:-1:exon
so has part: feature:1505249-1505355:-1:exon
so has part: feature:1499625-1499636:-1:exon
so has part: feature:1498019-1498118:-1:exon
so has part: feature:1497608-1497768:-1:exon
so has part: feature:1496992-1497132:-1:exon
so has part: feature:1496448-1496649:-1:exon
so has part: feature:1495789-1495953:-1:exon
so has part: feature:1495291-1495401:-1:exon
so has part: feature:1494631-1494714:-1:exon
so has part: feature:1490497-1490613:-1:exon
so has part: feature:1489659-1489724:-1:exon
so has part: feature:1489269-1489360:-1:exon
so has part: feature:1488735-1488885:-1:exon
so has part: feature:1487864-1487991:-1:exon
so has part: feature:1483961-1484057:-1:exon
so has part: feature:1479407-1479512:-1:exon
so has part: feature:1478505-1478612:-1:exon
so has part: feature:1475893-1475996:-1:exon
so has part: feature:1473683-1473795:-1:exon
so has part: feature:1473006-1473129:-1:exon
so has part: feature:1471784-1471897:-1:exon
so has part: feature:1466199-1466412:-1:exon
so has part: feature:1459754-1460004:-1:exon
so has part: feature:1457396-1458187:-1:exon

XP_042559561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1612424-1612824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1576400-1576663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1543048-1543153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1542375-1542514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1525577-1525668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525022-1525174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1524238-1524425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1521281-1521384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1519836-1519951:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1519160-1519210:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1518632-1518715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1517741-1517950:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1516649-1516761:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1516099-1516211:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1515522-1515653:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1515054-1515126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1514683-1514800:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1514174-1514241:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1513625-1513731:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1512257-1512307:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1510114-1510246:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1509344-1509876:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1508549-1508883:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1507535-1507676:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1506730-1506859:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1506003-1506062:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1505249-1505355:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1499625-1499636:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1498019-1498118:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1497608-1497768:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1496992-1497132:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1496448-1496649:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1495789-1495953:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1495291-1495401:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1494631-1494714:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1490497-1490613:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1489659-1489724:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1489269-1489360:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1488735-1488885:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1487864-1487991:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1483961-1484057:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1479407-1479512:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1478505-1478612:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1475893-1475996:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1473683-1473795:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1473006-1473129:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1471784-1471897:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1466199-1466412:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1459754-1460004:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1457396-1458187:-1:exon

cacna1ab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7950
gene: cacna1ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X8
translation: MLSPLCSDGSVIVERAPARWPPQGSSSQRRRPGHFPPPTSGSSVCANPTYYHAVYDVRVEQCREAPPFAFGRRDSGAGGGTGASLYSLVSAGGDALPAPPIRRRGGLVEHRDVIKAHQSHKLQSTPQALRKEWEMARFGDEVPARYGGGGPSQGGPGRGGSRQGGPPAPRVYKQSMAQRARTMALYNPIPVRQSCLTVNRSLFIFSEDNFVRKYAKKITEWPPFEWMILTTIIANCIVLALEQHLPDGDKTPLSERLDDTEPYFIAIFCFESGIKILALGFAFHKGSYLRSGWNVMDFVVVMTGILSTVGSEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFVAILMFAIIGLEFYMGKFHKTCFNNITREIYDKQPCGEALPARLCPEGTVCREYWIGPNYGITQFDNILFAVLTVFQCITMEGWTDMLYYSNDTSGSAYNWMYFVPLIIIGSFFMLNLVLGVLSGEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEDDKNPGNTYDAKRRPTLKKTKTDLLNSEQGADHMGDAVGSPFARGSLKNGKGGDATPFDKRERRLRFFIRKIVKTQAFYWTVLSLVGLNTMCVAAVHYDQPDLLSDFLFYAEFIFLGLFMSEMLIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWALIKPGTSFGISVLRALRLLRIFKVTKYWAPLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDGTPSTNFDTFPAAIMTVFQVLTGEDWNMVMYDGIESQGGVNTGMVFSIFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEETAATNQKIAIQKAKEVAEVSPLSAANLSIAAVTVKSERIDATESVLDCKEQQKNSKLPKSVWEARTAEIRRQNLMTSREALYNELDAEDAWKTNFRQNRADVKTHLDRPLVVNPQENRNNNTNKPRPGEPPEQALDHSQPCLQQPARHPGGRTGPGGGAGPGAGGLNLAHSLQSLQEEAEEMEEEGGGGGGGGGRRHHHHHHPHHHRHQHRGEGSEGSEQPRRAKQHRRRAAEAGEGEDGNAGGQERRHRRRRHDNTDGCREKCRQHRRKESGLSTSRPIHQALSRQDSQYSEDLDNLRNSSKLFLDQDPEGDLDSEPFYSHSHPERANNLLNLRGPGGRELQPGGGGGGGSSLILFDLSKAPLEHTAIHMPPLYPNAIMQVNKNANTEGNKKDEEKKEEEDDDEGDGDGKPKPMPPFSSCFIMSTTNPFRKCCHYILTLRYFEMCILSVIAMSSIALAAEDPVRPDSAQNNVLRYFDYVFTGVFTFEMLIKMVVLGLFLHQGAYFRDLWNILDFIVVSGALVAFAFTSQTRGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFFCTDESKEFERDCRGEYLVYNGNDEVKAQKREWKKYDFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERACIDFAINAKPLTRHMPKNKQSFQYRMWQFVVSPPFEYSIMSLIALNTVVLMMKYNDAPDAYDKVLKNLNIVFTTLFFTECVLKIIAFGILNYFMDAWNIFDFVSVLGSVTDIIVTEFVNNFINLSFLRLFRAARLIKLLRQQETIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGNVDLDEENAINEHNNFRTFIMALMLLFRSATGEAWHDIMLACLGGMPCDPETGNPNPECGSNISYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVIDPPLGLGKKCPHRVACKRLLRMDLPVAEDNSVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMMAIWPNLSQKHLDLLVTPHKSATDLTVGKIYA…
SIO_010081: cacna1ab
subclass of: SO_0000673
so part of: cacna1ab
location: complement(join(1457396..1458187,1459754..1460004,1466199..1466412,1471784..1471897,1473006..1473129,1473683..1473771,1475893..1475996,1478505..1478612,1479407..1479512,1485512..1485608,1487864..1487991,1488735..1488885,1489269..1489360,1489659..1489724,1490497..1490613,1494631..1494714,1495291..1495401,1495789..1495953,1496448..1496649,1496992..1497132,1497608..1497768,1498019..1498118,1499625..1499636,1505249..1505355,1506003..1506062,1506730..1506859,1507535..1507676,1508549..1508883,1509344..1509876,1510114..1510246,1512257..1512307,1513625..1513731,1514174..1514241,1514683..1514800,1515054..1515126,1515522..1515653,1516099..1516211,1516649..1516761,1517741..1517950,1518632..1518715,1519160..1519210,1519836..1519951,1521281..1521384,1524238..1524425,1525022..1525174,1525577..1525668,1542375..1542514,1543048..1543153,1576400..1576663,1612424..1612824))
location: region:1457396-1612824:-1
so has part: feature:1612424-1612824:-1:exon
so has part: feature:1576400-1576663:-1:exon
so has part: feature:1543048-1543153:-1:exon
so has part: feature:1542375-1542514:-1:exon
so has part: feature:1525577-1525668:-1:exon
so has part: feature:1525022-1525174:-1:exon
so has part: feature:1524238-1524425:-1:exon
so has part: feature:1521281-1521384:-1:exon
so has part: feature:1519836-1519951:-1:exon
so has part: feature:1519160-1519210:-1:exon
so has part: feature:1518632-1518715:-1:exon
so has part: feature:1517741-1517950:-1:exon
so has part: feature:1516649-1516761:-1:exon
so has part: feature:1516099-1516211:-1:exon
so has part: feature:1515522-1515653:-1:exon
so has part: feature:1515054-1515126:-1:exon
so has part: feature:1514683-1514800:-1:exon
so has part: feature:1514174-1514241:-1:exon
so has part: feature:1513625-1513731:-1:exon
so has part: feature:1512257-1512307:-1:exon
so has part: feature:1510114-1510246:-1:exon
so has part: feature:1509344-1509876:-1:exon
so has part: feature:1508549-1508883:-1:exon
so has part: feature:1507535-1507676:-1:exon
so has part: feature:1506730-1506859:-1:exon
so has part: feature:1506003-1506062:-1:exon
so has part: feature:1505249-1505355:-1:exon
so has part: feature:1499625-1499636:-1:exon
so has part: feature:1498019-1498118:-1:exon
so has part: feature:1497608-1497768:-1:exon
so has part: feature:1496992-1497132:-1:exon
so has part: feature:1496448-1496649:-1:exon
so has part: feature:1495789-1495953:-1:exon
so has part: feature:1495291-1495401:-1:exon
so has part: feature:1494631-1494714:-1:exon
so has part: feature:1490497-1490613:-1:exon
so has part: feature:1489659-1489724:-1:exon
so has part: feature:1489269-1489360:-1:exon
so has part: feature:1488735-1488885:-1:exon
so has part: feature:1487864-1487991:-1:exon
so has part: feature:1485512-1485608:-1:exon
so has part: feature:1479407-1479512:-1:exon
so has part: feature:1478505-1478612:-1:exon
so has part: feature:1475893-1475996:-1:exon
so has part: feature:1473683-1473771:-1:exon
so has part: feature:1473006-1473129:-1:exon
so has part: feature:1471784-1471897:-1:exon
so has part: feature:1466199-1466412:-1:exon
so has part: feature:1459754-1460004:-1:exon
so has part: feature:1457396-1458187:-1:exon

XP_042559567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1612424-1612824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1576400-1576663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1543048-1543153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1542375-1542514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1525577-1525668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525022-1525174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1524238-1524425:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1521281-1521384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1519836-1519951:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1519160-1519210:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1518632-1518715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1517741-1517950:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1516649-1516761:-1:exon