Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG28, LepOcu1, whole genome shotgun sequence.
type: Entry
definition: Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG28, LepOcu1, whole genome shotgun sequence.
sequence version: NC_023206.1
sequence date: 2016-01-08
sequence: sequence
division: CON
label: NC_023206.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA221149
dblink: SAMN00706774
keyword: WGS
keyword: RefSeq
source: Lepisosteus oculatus (spotted gar)
organism: Lepisosteus oculatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM001431.1.\nAssembly name: LepOcu1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Broad Institute on\n2012/01/13. The original whole-genome shotgun project has the\naccession AHAT00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Broad Institute\nAssembly Method :: AllPaths v. R38293\nAssembly Name :: LepOcu1\nGenome Coverage :: 677.5x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Lepisosteus oculatus Annotation\n Release 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 6.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000018
sequence length: 5380255
topology: linear
so has quality: SO_0000987
location: 1..5380255
location: region:1-5380255:1
RO_0002162: 7918

NC_023206
type: RefSeq
SIO_000068: refseq

PRJNA221149
type: BioProject
SIO_000068: bioproject

SAMN00706774
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5380255:1
position: 5380255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-5380255:1:source
so part of: sequence
organism: Lepisosteus oculatus
mol type: genomic DNA
isolate: Spotted Gar 1
sex: female
country: USA: Bayou Chevreuil, St. James Parish, Louisiana
lat lon: 29.91 N 90.80 W
linkage group: LG28

7918
type: Taxonomy
SIO_000068: taxonomy

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 7918
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1702757..1702856
location: region:1702757-1702856:1
so has part: feature:1702757-1702856:1:region

position:1702757:1
position: 1702757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1702856:1
position: 1702856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1702757-1702856:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 7918
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 3619888..3619987
location: region:3619888-3619987:1
so has part: feature:3619888-3619987:1:region

position:3619888:1
position: 3619888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3619987:1
position: 3619987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3619888-3619987:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 7918
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 3971421..3971520
location: region:3971421-3971520:1
so has part: feature:3971421-3971520:1:region

position:3971421:1
position: 3971421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3971520:1
position: 3971520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3971421-3971520:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 7918
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 4609945..4610044
location: region:4609945-4610044:1
so has part: feature:4609945-4610044:1:region

position:4609945:1
position: 4609945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4610044:1
position: 4610044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4609945-4610044:1:region

pfdn6
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: pfdn6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3391..6871)
location: region:3391-6871:-1
so has part: feature:3391-6871:-1:exon
subclass of: SO_0000010

102695758
type: Gene
SIO_000068: ncbigene

position:3391:-1
position: 3391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6871:-1
position: 6871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3391-6871:-1:exon

pfdn6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: pfdn6
product: prefoldin subunit 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006642766.2
SIO_010081: pfdn6
subclass of: SO_0000673
so part of: pfdn6
location: complement(join(3391..3696,5325..5449,5684..5754,6651..6871))
location: region:3391-6871:-1
so has part: feature:6651-6871:-1:exon
so has part: feature:5684-5754:-1:exon
so has part: feature:5325-5449:-1:exon
so has part: feature:3391-3696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6651-6871:-1:exon

position:6651:-1
position: 6651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5684-5754:-1:exon

position:5684:-1
position: 5684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5754:-1
position: 5754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5325-5449:-1:exon

position:5325:-1
position: 5325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5449:-1
position: 5449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3391-3696:-1:exon

position:3696:-1
position: 3696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pfdn6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: pfdn6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prefoldin subunit 6
translation: MAEAIQKRLQTELEKYQQTQKDLSKSMSARQKLEAQLTENNIVKEELDLLEAQNTVYKLIGPVLVKQDLDEAKATVGKRLEYITGEIQRYETLLKELERKSEQHRELLSSLQQEYQRAQGRAAVKV
SIO_010081: pfdn6
subclass of: SO_0000673
so part of: pfdn6
location: complement(join(3576..3696,5325..5449,5684..5754,6651..6714))
location: region:3576-6714:-1
so has part: feature:6651-6714:-1:exon
so has part: feature:5684-5754:-1:exon
so has part: feature:5325-5449:-1:exon
so has part: feature:3576-3696:-1:exon

XP_006642829.1
type: Protein
SIO_000068: ncbiprotein

position:3576:-1
position: 3576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6714:-1
position: 6714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6651-6714:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5684-5754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5325-5449:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3576-3696:-1:exon

mrps12
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: mrps12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8631..13307)
location: region:8631-13307:-1
so has part: feature:8631-13307:-1:exon
subclass of: SO_0000010

102692317
type: Gene
SIO_000068: ncbigene

position:8631:-1
position: 8631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13307:-1
position: 13307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8631-13307:-1:exon

mrps12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mrps12
product: mitochondrial ribosomal protein S12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015338839.1
SIO_010081: mrps12
subclass of: SO_0000673
so part of: mrps12
location: complement(join(8631..9324,10218..10284,13132..13307))
location: region:8631-13307:-1
so has part: feature:13132-13307:-1:exon
so has part: feature:10218-10284:-1:exon
so has part: feature:8631-9324:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13132-13307:-1:exon

position:13132:-1
position: 13132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10218-10284:-1:exon

position:10218:-1
position: 10218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10284:-1
position: 10284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8631-9324:-1:exon

position:9324:-1
position: 9324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mrps12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mrps12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S12, mitochondrial
translation: MALLSNLRPVVSALLWGVHGAGGVASWPLAPLRGMATLNQMHRQGRPRPEPPRVSPTFGRPQLKGVVLKTLIRKPKKPNSANRKCARVRLSNGREVVCFIPGEGHNLQEHNIVLVEGGRTQDLPGVKLKVVRGKYDCAHVQKKKQ
SIO_010081: mrps12
subclass of: SO_0000673
so part of: mrps12
location: complement(join(8936..9324,10218..10266))
location: region:8936-10266:-1
so has part: feature:10218-10266:-1:exon
so has part: feature:8936-9324:-1:exon

XP_015194325.1
type: Protein
SIO_000068: ncbiprotein

position:8936:-1
position: 8936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10266:-1
position: 10266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10218-10266:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8936-9324:-1:exon

mrpl11
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: mrpl11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13581..35675
location: region:13581-35675:1
so has part: feature:13581-35675:1:exon
subclass of: SO_0000010

102692521
type: Gene
SIO_000068: ncbigene

position:13581:1
position: 13581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35675:1
position: 35675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13581-35675:1:exon

mrpl11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mrpl11
product: mitochondrial ribosomal protein L11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015338836.1
SIO_010081: mrpl11
subclass of: SO_0000673
so part of: mrpl11
location: join(13581..13809,16037..16166,29977..30072,30151..30244,31249..31408,32703..32829,35480..35675)
location: region:13581-35675:1
so has part: feature:13581-13809:1:exon
so has part: feature:16037-16166:1:exon
so has part: feature:29977-30072:1:exon
so has part: feature:30151-30244:1:exon
so has part: feature:31249-31408:1:exon
so has part: feature:32703-32829:1:exon
so has part: feature:35480-35675:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13581-13809:1:exon

position:13809:1
position: 13809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16037-16166:1:exon

position:16037:1
position: 16037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16166:1
position: 16166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:29977-30072:1:exon

position:29977:1
position: 29977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30072:1
position: 30072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:30151-30244:1:exon

position:30151:1
position: 30151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30244:1
position: 30244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:31249-31408:1:exon

position:31249:1
position: 31249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31408:1
position: 31408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:32703-32829:1:exon

position:32703:1
position: 32703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32829:1
position: 32829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:35480-35675:1:exon

position:35480:1
position: 35480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mrpl11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mrpl11
product: mitochondrial ribosomal protein L11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015338837.1
SIO_010081: mrpl11
subclass of: SO_0000673
so part of: mrpl11
location: join(13581..13809,16037..16166,29977..30072,30151..30244,31249..31408,32703..32829,35207..35256,35480..35622)
location: region:13581-35622:1
so has part: feature:13581-13809:1:exon
so has part: feature:16037-16166:1:exon
so has part: feature:29977-30072:1:exon
so has part: feature:30151-30244:1:exon
so has part: feature:31249-31408:1:exon
so has part: feature:32703-32829:1:exon
so has part: feature:35207-35256:1:exon
so has part: feature:35480-35622:1:exon

position:35622:1
position: 35622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13581-13809:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16037-16166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29977-30072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30151-30244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31249-31408:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32703-32829:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:35207-35256:1:exon

position:35207:1
position: 35207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35256:1
position: 35256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:35480-35622:1:exon

mrpl11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mrpl11
product: mitochondrial ribosomal protein L11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_015338838.1
SIO_010081: mrpl11
subclass of: SO_0000673
so part of: mrpl11
location: join(13583..13809,16037..16166,29977..30072,30151..30244,31249..31408,32703..32829,35135..35562)
location: region:13583-35562:1
so has part: feature:13583-13809:1:exon
so has part: feature:16037-16166:1:exon
so has part: feature:29977-30072:1:exon
so has part: feature:30151-30244:1:exon
so has part: feature:31249-31408:1:exon
so has part: feature:32703-32829:1:exon
so has part: feature:35135-35562:1:exon

position:13583:1
position: 13583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35562:1
position: 35562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13583-13809:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16037-16166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29977-30072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30151-30244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31249-31408:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32703-32829:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:35135-35562:1:exon

position:35135:1
position: 35135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mrpl11
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7918
gene: mrpl11
product: mitochondrial ribosomal protein L11, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_001477367.1
SIO_010081: mrpl11
so part of: mrpl11
location: join(13583..13809,16037..16166,29977..30072,30151..30244,31249..31408,32703..32829,35135..35256,35480..35503)
location: region:13583-35503:1
so has part: feature:13583-13809:1:exon
so has part: feature:16037-16166:1:exon
so has part: feature:29977-30072:1:exon
so has part: feature:30151-30244:1:exon
so has part: feature:31249-31408:1:exon
so has part: feature:32703-32829:1:exon
so has part: feature:35135-35256:1:exon
so has part: feature:35480-35503:1:exon

position:35503:1
position: 35503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13583-13809:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16037-16166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29977-30072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30151-30244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31249-31408:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32703-32829:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:35135-35256:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:35480-35503:1:exon

mrpl11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mrpl11
product: mitochondrial ribosomal protein L11, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006642751.2
SIO_010081: mrpl11
subclass of: SO_0000673
so part of: mrpl11
location: join(13589..13809,16037..16166,29977..30072,30151..30244,31249..31408,31751..32026)
location: region:13589-32026:1
so has part: feature:13589-13809:1:exon
so has part: feature:16037-16166:1:exon
so has part: feature:29977-30072:1:exon
so has part: feature:30151-30244:1:exon
so has part: feature:31249-31408:1:exon
so has part: feature:31751-32026:1:exon

position:13589:1
position: 13589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32026:1
position: 32026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13589-13809:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16037-16166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29977-30072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30151-30244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31249-31408:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31751-32026:1:exon

position:31751:1
position: 31751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mrpl11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mrpl11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L11, mitochondrial isoform X1
translation: MSKAARAVKVVKKADVGNVIRTIVRAGQAAPGPPLGPILGQRGIPIGQFCKDFNEKTKDIKEGIPLPIKIFVKPDRTYELKISQPTVSYFLKAAAGLEKGAGRTGHEVAGMVSVRHVYEIAQVKVKDESFALQNASLATVVKSIIGTAQSLGIKVVNKSLLLSLWLLPVVTTRGHHNTSSEGSLWLSTLCCQTVIPLSSLRCTRRSAPAKRPHASAFLSIEHLSEKNASSSTTLQFPAV
SIO_010081: mrpl11
subclass of: SO_0000673
so part of: mrpl11
location: join(16044..16166,29977..30072,30151..30244,31249..31408,32703..32829,35480..35599)
location: region:16044-35599:1
so has part: feature:16044-16166:1:exon
so has part: feature:29977-30072:1:exon
so has part: feature:30151-30244:1:exon
so has part: feature:31249-31408:1:exon
so has part: feature:32703-32829:1:exon
so has part: feature:35480-35599:1:exon

XP_015194322.1
type: Protein
SIO_000068: ncbiprotein

position:16044:1
position: 16044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35599:1
position: 35599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16044-16166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29977-30072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:30151-30244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31249-31408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:32703-32829:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:35480-35599:1:exon

mrpl11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mrpl11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L11, mitochondrial isoform X2
translation: MSKAARAVKVVKKADVGNVIRTIVRAGQAAPGPPLGPILGQRGIPIGQFCKDFNEKTKDIKEGIPLPIKIFVKPDRTYELKISQPTVSYFLKAAAGLEKGAGRTGHEVAGMVSVRHVYEIAQVKVKDESFALQNASLATVVKSIIGTAQSLGIKVVNKSLLLSLWLLPVVTTRGHHNTSSEGSLWLSTLCCQTVIPLSSLFQPQLWKVKELSYGELSDVQEDQHQQRGHMHRPSYP
SIO_010081: mrpl11
subclass of: SO_0000673
so part of: mrpl11
location: join(16044..16166,29977..30072,30151..30244,31249..31408,32703..32829,35207..35256,35480..35540)
location: region:16044-35540:1
so has part: feature:16044-16166:1:exon
so has part: feature:29977-30072:1:exon
so has part: feature:30151-30244:1:exon
so has part: feature:31249-31408:1:exon
so has part: feature:32703-32829:1:exon
so has part: feature:35207-35256:1:exon
so has part: feature:35480-35540:1:exon

XP_015194323.1
type: Protein
SIO_000068: ncbiprotein

position:35540:1
position: 35540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16044-16166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29977-30072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:30151-30244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31249-31408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:32703-32829:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:35207-35256:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:35480-35540:1:exon

mrpl11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mrpl11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L11, mitochondrial isoform X3
translation: MSKAARAVKVVKKADVGNVIRTIVRAGQAAPGPPLGPILGQRGIPIGQFCKDFNEKTKDIKEGIPLPIKIFVKPDRTYELKISQPTVSYFLKAAAGLEKGAGRTGHEVAGMVSVRHVYEIAQVKVKDESFALQNASLATVVKSIIGTAQSLGIKVVNKSLLLSLWLLPVVTTRGHHNTSSEGSLWLSTLCCQTVIPLSSLACF
SIO_010081: mrpl11
subclass of: SO_0000673
so part of: mrpl11
location: join(16044..16166,29977..30072,30151..30244,31249..31408,32703..32829,35135..35146)
location: region:16044-35146:1
so has part: feature:16044-16166:1:exon
so has part: feature:29977-30072:1:exon
so has part: feature:30151-30244:1:exon
so has part: feature:31249-31408:1:exon
so has part: feature:32703-32829:1:exon
so has part: feature:35135-35146:1:exon

XP_015194324.1
type: Protein
SIO_000068: ncbiprotein

position:35146:1
position: 35146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16044-16166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29977-30072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:30151-30244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31249-31408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:32703-32829:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:35135-35146:1:exon

mrpl11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mrpl11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L11, mitochondrial isoform X4
translation: MSKAARAVKVVKKADVGNVIRTIVRAGQAAPGPPLGPILGQRGIPIGQFCKDFNEKTKDIKEGIPLPIKIFVKPDRTYELKISQPTVSYFLKAAAGLEKGAGRTGHEVAGMVSVRHVYEIAQVKVKDESFALQNASLATVVKSIIGTAQSLGIKVVNNLSAEEYAAFLQQKEERLRQEQEAAAAELTVSSKKK
SIO_010081: mrpl11
subclass of: SO_0000673
so part of: mrpl11
location: join(16044..16166,29977..30072,30151..30244,31249..31408,31751..31859)
location: region:16044-31859:1
so has part: feature:16044-16166:1:exon
so has part: feature:29977-30072:1:exon
so has part: feature:30151-30244:1:exon
so has part: feature:31249-31408:1:exon
so has part: feature:31751-31859:1:exon

XP_006642814.1
type: Protein
SIO_000068: ncbiprotein

position:31859:1
position: 31859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16044-16166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29977-30072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:30151-30244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31249-31408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31751-31859:1:exon

LOC107075873
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(16174..26167)
location: region:16174-26167:-1
so has part: feature:16174-26167:-1:exon
subclass of: SO_0000010

107075873
type: Gene
SIO_000068: ncbigene

position:16174:-1
position: 16174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26167:-1
position: 26167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16174-26167:-1:exon

LOC107075873
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7918
gene: LOC107075873
product: transmembrane protein 121-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001477366.1
SIO_010081: LOC107075873
so part of: LOC107075873
location: complement(join(16174..16505,18838..19972,22369..22485,24825..26167))
location: region:16174-26167:-1
so has part: feature:24825-26167:-1:exon
so has part: feature:22369-22485:-1:exon
so has part: feature:18838-19972:-1:exon
so has part: feature:16174-16505:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24825-26167:-1:exon

position:24825:-1
position: 24825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22369-22485:-1:exon

position:22369:-1
position: 22369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22485:-1
position: 22485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18838-19972:-1:exon

position:18838:-1
position: 18838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19972:-1
position: 19972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16174-16505:-1:exon

position:16505:-1
position: 16505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107075873
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107075873
product: transmembrane protein 121-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015338835.1
SIO_010081: LOC107075873
subclass of: SO_0000673
so part of: LOC107075873
location: complement(join(17337..19972,24825..26167))
location: region:17337-26167:-1
so has part: feature:24825-26167:-1:exon
so has part: feature:17337-19972:-1:exon

position:17337:-1
position: 17337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24825-26167:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17337-19972:-1:exon

LOC107075873
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107075873
product: transmembrane protein 121-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015338834.1
SIO_010081: LOC107075873
subclass of: SO_0000673
so part of: LOC107075873
location: complement(join(17337..19972,22369..22485,24825..26167))
location: region:17337-26167:-1
so has part: feature:24825-26167:-1:exon
so has part: feature:22369-22485:-1:exon
so has part: feature:17337-19972:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24825-26167:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22369-22485:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17337-19972:-1:exon

LOC107075873
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107075873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 121-like isoform X1
translation: MSAALGSGCGVQCSMAPPPPTNKPHVCMSAIVIVSTMAVMDVYLVEQNLGPKKIGVCIMVLVGDLCFLIVLRYVAVWVGAEVKTAKRGYAMVLWFLFIFVLEIKLYFVYQNYKSDRRAPDPLARKTLTLLLSISIPSLFVILVATDHMEYVTGFRKKEDLRNRLFWVVIDLLDVLDIQANLWEPQKKALPLWAEGLIFFYCYVLLLVLPCVSLSEISMQGENIVPHRMMVYPILSLATINVVTLFIRGGNMLWYHDPRVSTVFLGKNVLAIVIKLCAVLRYPRQLAESSQGLGPELGSTSLRHRHALAAPLPLSHAHTPPAPFDGTEPTEDSLGPSFITREL
SIO_010081: LOC107075873
subclass of: SO_0000673
so part of: LOC107075873
location: complement(join(18966..19972,22369..22390))
location: region:18966-22390:-1
so has part: feature:22369-22390:-1:exon
so has part: feature:18966-19972:-1:exon

XP_015194320.1
type: Protein
SIO_000068: ncbiprotein

position:18966:-1
position: 18966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22390:-1
position: 22390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22369-22390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18966-19972:-1:exon

LOC107075873
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107075873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 121-like isoform X2
translation: MAPPPPTNKPHVCMSAIVIVSTMAVMDVYLVEQNLGPKKIGVCIMVLVGDLCFLIVLRYVAVWVGAEVKTAKRGYAMVLWFLFIFVLEIKLYFVYQNYKSDRRAPDPLARKTLTLLLSISIPSLFVILVATDHMEYVTGFRKKEDLRNRLFWVVIDLLDVLDIQANLWEPQKKALPLWAEGLIFFYCYVLLLVLPCVSLSEISMQGENIVPHRMMVYPILSLATINVVTLFIRGGNMLWYHDPRVSTVFLGKNVLAIVIKLCAVLRYPRQLAESSQGLGPELGSTSLRHRHALAAPLPLSHAHTPPAPFDGTEPTEDSLGPSFITREL
SIO_010081: LOC107075873
subclass of: SO_0000673
so part of: LOC107075873
location: complement(18966..19952)
location: region:18966-19952:-1
so has part: feature:18966-19952:-1:exon

XP_015194321.1
type: Protein
SIO_000068: ncbiprotein

position:19952:-1
position: 19952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18966-19952:-1:exon

npas4
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: npas4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(35673..42363)
location: region:35673-42363:-1
so has part: feature:35673-42363:-1:exon
subclass of: SO_0000010

102695952
type: Gene
SIO_000068: ncbigene

position:35673:-1
position: 35673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42363:-1
position: 42363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35673-42363:-1:exon

npas4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: npas4
product: neuronal PAS domain protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338740.1
SIO_010081: npas4
subclass of: SO_0000673
so part of: npas4
location: complement(join(35673..37358,37704..39151,39244..39427,40792..40939,41381..41535,42001..42363))
location: region:35673-42363:-1
so has part: feature:42001-42363:-1:exon
so has part: feature:41381-41535:-1:exon
so has part: feature:40792-40939:-1:exon
so has part: feature:39244-39427:-1:exon
so has part: feature:37704-39151:-1:exon
so has part: feature:35673-37358:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42001-42363:-1:exon

position:42001:-1
position: 42001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:41381-41535:-1:exon

position:41381:-1
position: 41381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41535:-1
position: 41535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:40792-40939:-1:exon

position:40792:-1
position: 40792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40939:-1
position: 40939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:39244-39427:-1:exon

position:39244:-1
position: 39244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39427:-1
position: 39427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:37704-39151:-1:exon

position:37704:-1
position: 37704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39151:-1
position: 39151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:35673-37358:-1:exon

position:37358:-1
position: 37358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

npas4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: npas4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal PAS domain-containing protein 4
translation: MYRSTKGASKARRDQINAEIRNLKELLPISEADKARLSYLHIMSLACMYTRKSVFFSQGTGTQEESGAFLSFQELSEFVQALSGFLLVMTSEGKLLYLSENVTEHLGHSMVDLVAQGDSVYDIIDPTDHFVMRSNLLPSPAAAAGENRSVPPGRLCLCSVPLGTPAHAALCSPSAVSEAGDGKVELVVRLQARDSSWVWIYALLQLEARENPISCHNYVISDAEAWSLRQQLASEESQLAFVLRATASYQESLLQSPGQLSSPDQVFTPSSGGLSVQSFDFGSVCPADSGQELSDEAGAGGSQGAAALGPDEPMQLGGTRSSISSAEEEPPAPGQQPPGDALDFFARNCAFLPFQADPLLPGPPPKEFVCTPPYTPQQGGCSFLFGAPDQTFPPSETTPSELFFPLDSCSSAAYEKLPPTPDSPGDGDCTVMTVPEVRGPLYIDVPMVPEGLLTPEASPIKQPFSFFSYSEKERAEISLLAEQISTLAEGLSSALYPDPLFGAKHAHVARSSSLPAGVPPVPPQPGLLVDFSQLKPWKSIDFSLLAEDASLFEENVFESILKDFSSSSSSSSSPPSPSVPSLAAAPPLPPAKVGGQVTARRPAPQFGGTVGGAGSSPLSLDAADPRVEAAHPSSVAGVAAGGVPLAAPLSPPSTDLSPEEQSFLEELASYEPVFEASASSCPCDGFHDELYQLRNHMQDNFHEDGSGRDPPF
SIO_010081: npas4
subclass of: SO_0000673
so part of: npas4
location: complement(join(37330..37358,37704..39151,39244..39427,40792..40939,41381..41535,42001..42175))
location: region:37330-42175:-1
so has part: feature:42001-42175:-1:exon
so has part: feature:41381-41535:-1:exon
so has part: feature:40792-40939:-1:exon
so has part: feature:39244-39427:-1:exon
so has part: feature:37704-39151:-1:exon
so has part: feature:37330-37358:-1:exon

XP_015194226.1
type: Protein
SIO_000068: ncbiprotein

position:37330:-1
position: 37330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42175:-1
position: 42175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42001-42175:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41381-41535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:40792-40939:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39244-39427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37704-39151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37330-37358:-1:exon

efemp2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: efemp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(55649..60486)
location: region:55649-60486:-1
so has part: feature:55649-60486:-1:exon
subclass of: SO_0000010

102692725
type: Gene
SIO_000068: ncbigene

position:55649:-1
position: 55649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60486:-1
position: 60486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55649-60486:-1:exon

efemp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: efemp2
product: EGF containing fibulin-like extracellular matrix protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_006642752.2
SIO_010081: efemp2
subclass of: SO_0000673
so part of: efemp2
location: complement(join(55649..56362,56804..56999,57086..57212,57312..57431,57902..58021,58452..58568,58816..58938,59787..60017,60113..60161,60345..60486))
location: region:55649-60486:-1
so has part: feature:60345-60486:-1:exon
so has part: feature:60113-60161:-1:exon
so has part: feature:59787-60017:-1:exon
so has part: feature:58816-58938:-1:exon
so has part: feature:58452-58568:-1:exon
so has part: feature:57902-58021:-1:exon
so has part: feature:57312-57431:-1:exon
so has part: feature:57086-57212:-1:exon
so has part: feature:56804-56999:-1:exon
so has part: feature:55649-56362:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60345-60486:-1:exon

position:60345:-1
position: 60345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:60113-60161:-1:exon

position:60113:-1
position: 60113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60161:-1
position: 60161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:59787-60017:-1:exon

position:59787:-1
position: 59787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60017:-1
position: 60017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:58816-58938:-1:exon

position:58816:-1
position: 58816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58938:-1
position: 58938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:58452-58568:-1:exon

position:58452:-1
position: 58452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58568:-1
position: 58568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:57902-58021:-1:exon

position:57902:-1
position: 57902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58021:-1
position: 58021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:57312-57431:-1:exon

position:57312:-1
position: 57312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57431:-1
position: 57431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:57086-57212:-1:exon

position:57086:-1
position: 57086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57212:-1
position: 57212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:56804-56999:-1:exon

position:56804:-1
position: 56804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56999:-1
position: 56999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:55649-56362:-1:exon

position:56362:-1
position: 56362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

efemp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: efemp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EGF-containing fibulin-like extracellular matrix protein 2
translation: MRPLWVVLLTCALHTAISQEPSESDAFTECTDGYQWDAQTLHCKDINECETIPDACKGEMKCFNHYGGYLCLPRSASVIANNEVNAGAGDPSQSPASLPAAGHTPFNPCSLGYEPQGDTCADVDECEQDLHDCQPSQLCINTAGSFTCQCPDGYRKIGTECVDIDECRYRYCQHRCVNSPGSFSCQCEPGFQLAGNNRSCVDVDECDMGAPCQQRCYNTYGTFACRCEQGYELGEDGFACNDIDECSYSSYLCQYRCVNEPGRFSCVCPEGYQLLGTRLCQDINECETGAHQCSESQTCVNIHGGYQCVETNRCQEPYVQVSDNRCVCPVTKPGCRELPFSIVHRYMSITSDRSVPSDIFQIQATSVYPGAYNTFRIRSGDEQGDFYIRQINNISAMLVLARAVTGPREFVLDLEMISVNPLMSYQTSSALRLAVYVGPYAF
SIO_010081: efemp2
subclass of: SO_0000673
so part of: efemp2
location: complement(join(56201..56362,56804..56999,57086..57212,57312..57431,57902..58021,58452..58568,58816..58938,59787..60017,60113..60161,60345..60428))
location: region:56201-60428:-1
so has part: feature:60345-60428:-1:exon
so has part: feature:60113-60161:-1:exon
so has part: feature:59787-60017:-1:exon
so has part: feature:58816-58938:-1:exon
so has part: feature:58452-58568:-1:exon
so has part: feature:57902-58021:-1:exon
so has part: feature:57312-57431:-1:exon
so has part: feature:57086-57212:-1:exon
so has part: feature:56804-56999:-1:exon
so has part: feature:56201-56362:-1:exon

XP_006642815.1
type: Protein
SIO_000068: ncbiprotein

position:56201:-1
position: 56201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60428:-1
position: 60428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60345-60428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60113-60161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59787-60017:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58816-58938:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58452-58568:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57902-58021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57312-57431:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:57086-57212:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56804-56999:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:56201-56362:-1:exon

fibp
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: fibp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(68972..71227)
location: region:68972-71227:-1
so has part: feature:68972-71227:-1:exon
subclass of: SO_0000010

102696353
type: Gene
SIO_000068: ncbigene

position:68972:-1
position: 68972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71227:-1
position: 71227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68972-71227:-1:exon

fibp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: fibp
product: fibroblast growth factor (acidic) intracellular binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015338828.1
SIO_010081: fibp
subclass of: SO_0000673
so part of: fibp
location: complement(join(68972..69175,69434..69531,69898..69984,70068..70131,70379..70487,70874..71007,71097..71227))
location: region:68972-71227:-1
so has part: feature:71097-71227:-1:exon
so has part: feature:70874-71007:-1:exon
so has part: feature:70379-70487:-1:exon
so has part: feature:70068-70131:-1:exon
so has part: feature:69898-69984:-1:exon
so has part: feature:69434-69531:-1:exon
so has part: feature:68972-69175:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71097-71227:-1:exon

position:71097:-1
position: 71097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:70874-71007:-1:exon

position:70874:-1
position: 70874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71007:-1
position: 71007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:70379-70487:-1:exon

position:70379:-1
position: 70379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70487:-1
position: 70487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:70068-70131:-1:exon

position:70068:-1
position: 70068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70131:-1
position: 70131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:69898-69984:-1:exon

position:69898:-1
position: 69898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69984:-1
position: 69984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:69434-69531:-1:exon

position:69434:-1
position: 69434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69531:-1
position: 69531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:68972-69175:-1:exon

position:69175:-1
position: 69175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fibp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: fibp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acidic fibroblast growth factor intracellular-binding protein
translation: MKGPLVENIQQHFLLSDRLARDYAAIVFFANSRFETGKKKLQYLTFEDFAFCASQLIQYWTVGAVDSMVEDMDVDLDKEFLQDLKDLKILITDKDMLDQHKSLVCTALRGKVQVFAEMEANFKNLSRSLVNIAAKLMHTKDARDLFIDLVEKFIEPCRSDRWILNDVRVFLTQYTNSARALDAFRHQAIWERYMGVMKSCILKMYHE
SIO_010081: fibp
subclass of: SO_0000673
so part of: fibp
location: complement(join(69106..69175,69434..69531,69898..69984,70068..70131,70379..70487,70874..71007,71097..71158))
location: region:69106-71158:-1
so has part: feature:71097-71158:-1:exon
so has part: feature:70874-71007:-1:exon
so has part: feature:70379-70487:-1:exon
so has part: feature:70068-70131:-1:exon
so has part: feature:69898-69984:-1:exon
so has part: feature:69434-69531:-1:exon
so has part: feature:69106-69175:-1:exon

XP_015194314.1
type: Protein
SIO_000068: ncbiprotein

position:69106:-1
position: 69106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71158:-1
position: 71158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71097-71158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:70874-71007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:70379-70487:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:70068-70131:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:69898-69984:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69434-69531:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69106-69175:-1:exon

ccdc85b
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ccdc85b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 76049..79245
location: region:76049-79245:1
so has part: feature:76049-79245:1:exon
subclass of: SO_0000010

102693058
type: Gene
SIO_000068: ncbigene

position:76049:1
position: 76049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79245:1
position: 79245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76049-79245:1:exon

ccdc85b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ccdc85b
product: coiled-coil domain containing 85B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015338846.1
SIO_010081: ccdc85b
subclass of: SO_0000673
so part of: ccdc85b
location: join(76049..78653,78699..79245)
location: region:76049-79245:1
so has part: feature:76049-78653:1:exon
so has part: feature:78699-79245:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:76049-78653:1:exon

position:78653:1
position: 78653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:78699-79245:1:exon

position:78699:1
position: 78699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ccdc85b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ccdc85b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 85B
translation: MGSGDAERAQRELGRLSDEDLLRSSKEELVARLRREEADKIAALLQRGRLIAEVNRQLQGHLLEVRELKAVNQRLQQDNRELRDLCCFLDDDRLKAKRLAREWQLFGQHAARVLRDDLGGYLQKLAELERLQGALLRENLDLKELCLVLEEECVGRAEGSPAGSSELSLPCLARDLGDGSSSTGSVGSPDQLHAACSPED
SIO_010081: ccdc85b
subclass of: SO_0000673
so part of: ccdc85b
location: 77184..77786
location: region:77184-77786:1
so has part: feature:77184-77786:1:exon

XP_015194332.1
type: Protein
SIO_000068: ncbiprotein

position:77184:1
position: 77184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77786:1
position: 77786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77184-77786:1:exon

fosl1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: fosl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(79119..86677)
location: region:79119-86677:-1
so has part: feature:79119-86677:-1:exon
subclass of: SO_0000010

102696740
type: Gene
SIO_000068: ncbigene

position:79119:-1
position: 79119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86677:-1
position: 86677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79119-86677:-1:exon

fosl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: fosl1
product: FOS-like antigen 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015338845.1
SIO_010081: fosl1
subclass of: SO_0000673
so part of: fosl1
location: complement(join(79119..80280,80954..81061,83330..83563,86627..86677))
location: region:79119-86677:-1
so has part: feature:86627-86677:-1:exon
so has part: feature:83330-83563:-1:exon
so has part: feature:80954-81061:-1:exon
so has part: feature:79119-80280:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86627-86677:-1:exon

position:86627:-1
position: 86627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:83330-83563:-1:exon

position:83330:-1
position: 83330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83563:-1
position: 83563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80954-81061:-1:exon

position:80954:-1
position: 80954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81061:-1
position: 81061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:79119-80280:-1:exon

position:80280:-1
position: 80280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fosl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: fosl1
product: FOS-like antigen 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015338844.1
SIO_010081: fosl1
subclass of: SO_0000673
so part of: fosl1
location: complement(join(79119..80280,80954..81061,83330..83563,84831..85416))
location: region:79119-85416:-1
so has part: feature:84831-85416:-1:exon
so has part: feature:83330-83563:-1:exon
so has part: feature:80954-81061:-1:exon
so has part: feature:79119-80280:-1:exon

position:85416:-1
position: 85416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84831-85416:-1:exon

position:84831:-1
position: 84831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:83330-83563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80954-81061:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:79119-80280:-1:exon

fosl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: fosl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fos-related antigen 1 isoform X2
translation: MCPARAPSTPPSKQGGSDTVPFVPSLNAITSSQDLQWMVQPAMLSGPQGSPRLPYYPCAAPLPLPGASGRPGVIRAVGVAGSARRRHDEHLSPEELERRRVRRERNKLAAAKCRNRRRELTETLQTETDELESAKSRLQKEIAELEKEKEKLELVLEAHRPICKIQESDSDSDPPPGLSALRPVKSEPARAREPPSSSSSSSSATAQTQGRPKTRLPPKIRLPASSAPDADALHTPVLLTTPSLTPFTASLVFTYPPSPLDSGAGAAAAPPAARAQPCGAAHRRSSSSGEQSSDSLNSPTLLAL
SIO_010081: fosl1
subclass of: SO_0000673
so part of: fosl1
location: complement(join(79744..80280,80954..81061,83330..83563,86627..86662))
location: region:79744-86662:-1
so has part: feature:86627-86662:-1:exon
so has part: feature:83330-83563:-1:exon
so has part: feature:80954-81061:-1:exon
so has part: feature:79744-80280:-1:exon

XP_015194331.1
type: Protein
SIO_000068: ncbiprotein

position:79744:-1
position: 79744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86662:-1
position: 86662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86627-86662:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83330-83563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80954-81061:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:79744-80280:-1:exon

fosl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: fosl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fos-related antigen 1 isoform X1
translation: MFRDYGSNCSGGSGGPFGGPGASRAPNPGGADRSGAAQLQKQGGSDTVPFVPSLNAITSSQDLQWMVQPAMLSGPQGSPRLPYYPCAAPLPLPGASGRPGVIRAVGVAGSARRRHDEHLSPEELERRRVRRERNKLAAAKCRNRRRELTETLQTETDELESAKSRLQKEIAELEKEKEKLELVLEAHRPICKIQESDSDSDPPPGLSALRPVKSEPARAREPPSSSSSSSSATAQTQGRPKTRLPPKIRLPASSAPDADALHTPVLLTTPSLTPFTASLVFTYPPSPLDSGAGAAAAPPAARAQPCGAAHRRSSSSGEQSSDSLNSPTLLAL
SIO_010081: fosl1
subclass of: SO_0000673
so part of: fosl1
location: complement(join(79744..80280,80954..81061,83330..83563,84831..84950))
location: region:79744-84950:-1
so has part: feature:84831-84950:-1:exon
so has part: feature:83330-83563:-1:exon
so has part: feature:80954-81061:-1:exon
so has part: feature:79744-80280:-1:exon

XP_015194330.1
type: Protein
SIO_000068: ncbiprotein

position:84950:-1
position: 84950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84831-84950:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83330-83563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80954-81061:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:79744-80280:-1:exon

mus81
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: mus81
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(90299..95948)
location: region:90299-95948:-1
so has part: feature:90299-95948:-1:exon
subclass of: SO_0000010

102696939
type: Gene
SIO_000068: ncbigene

position:90299:-1
position: 90299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95948:-1
position: 95948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90299-95948:-1:exon

mus81
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mus81
product: MUS81 structure-specific endonuclease subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015338734.1
SIO_010081: mus81
subclass of: SO_0000673
so part of: mus81
location: complement(join(90299..90650,90769..90852,91266..91369,91689..91820,91916..92011,92091..92207,92324..92431,92540..92667,92771..92968,93686..93847,94280..94368,94508..94588,94687..94791,94897..95000,95205..95334,95410..95948))
location: region:90299-95948:-1
so has part: feature:95410-95948:-1:exon
so has part: feature:95205-95334:-1:exon
so has part: feature:94897-95000:-1:exon
so has part: feature:94687-94791:-1:exon
so has part: feature:94508-94588:-1:exon
so has part: feature:94280-94368:-1:exon
so has part: feature:93686-93847:-1:exon
so has part: feature:92771-92968:-1:exon
so has part: feature:92540-92667:-1:exon
so has part: feature:92324-92431:-1:exon
so has part: feature:92091-92207:-1:exon
so has part: feature:91916-92011:-1:exon
so has part: feature:91689-91820:-1:exon
so has part: feature:91266-91369:-1:exon
so has part: feature:90769-90852:-1:exon
so has part: feature:90299-90650:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95410-95948:-1:exon

position:95410:-1
position: 95410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:95205-95334:-1:exon

position:95205:-1
position: 95205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95334:-1
position: 95334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:94897-95000:-1:exon

position:94897:-1
position: 94897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95000:-1
position: 95000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:94687-94791:-1:exon

position:94687:-1
position: 94687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94791:-1
position: 94791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:94508-94588:-1:exon

position:94508:-1
position: 94508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94588:-1
position: 94588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:94280-94368:-1:exon

position:94280:-1
position: 94280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94368:-1
position: 94368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:93686-93847:-1:exon

position:93686:-1
position: 93686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93847:-1
position: 93847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:92771-92968:-1:exon

position:92771:-1
position: 92771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92968:-1
position: 92968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:92540-92667:-1:exon

position:92540:-1
position: 92540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92667:-1
position: 92667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:92324-92431:-1:exon

position:92324:-1
position: 92324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92431:-1
position: 92431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:92091-92207:-1:exon

position:92091:-1
position: 92091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92207:-1
position: 92207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:91916-92011:-1:exon

position:91916:-1
position: 91916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92011:-1
position: 92011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:91689-91820:-1:exon

position:91689:-1
position: 91689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91820:-1
position: 91820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:91266-91369:-1:exon

position:91266:-1
position: 91266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91369:-1
position: 91369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:90769-90852:-1:exon

position:90769:-1
position: 90769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90852:-1
position: 90852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:90299-90650:-1:exon

position:90650:-1
position: 90650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mus81
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mus81
product: MUS81 structure-specific endonuclease subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015338735.1
SIO_010081: mus81
subclass of: SO_0000673
so part of: mus81
location: complement(join(90299..90650,90769..90852,91266..91369,91689..91820,91916..92011,92091..92207,92324..92431,92540..92667,92771..92965,93686..93847,94280..94368,94508..94588,94687..94794,94897..95000,95205..95334,95410..95948))
location: region:90299-95948:-1
so has part: feature:95410-95948:-1:exon
so has part: feature:95205-95334:-1:exon
so has part: feature:94897-95000:-1:exon
so has part: feature:94687-94794:-1:exon
so has part: feature:94508-94588:-1:exon
so has part: feature:94280-94368:-1:exon
so has part: feature:93686-93847:-1:exon
so has part: feature:92771-92965:-1:exon
so has part: feature:92540-92667:-1:exon
so has part: feature:92324-92431:-1:exon
so has part: feature:92091-92207:-1:exon
so has part: feature:91916-92011:-1:exon
so has part: feature:91689-91820:-1:exon
so has part: feature:91266-91369:-1:exon
so has part: feature:90769-90852:-1:exon
so has part: feature:90299-90650:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95410-95948:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95205-95334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94897-95000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94687-94794:-1:exon

position:94794:-1
position: 94794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:94508-94588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94280-94368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93686-93847:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92771-92965:-1:exon

position:92965:-1
position: 92965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:92540-92667:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92324-92431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92091-92207:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91916-92011:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91689-91820:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:91266-91369:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:90769-90852:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:90299-90650:-1:exon

mus81
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mus81
product: MUS81 structure-specific endonuclease subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015338733.1
SIO_010081: mus81
subclass of: SO_0000673
so part of: mus81
location: complement(join(90299..90650,90769..90852,91266..91369,91689..91820,91916..92011,92091..92207,92324..92431,92540..92667,92771..92968,93686..93847,94280..94368,94508..94588,94687..94794,94897..95000,95205..95334,95410..95947))
location: region:90299-95947:-1
so has part: feature:95410-95947:-1:exon
so has part: feature:95205-95334:-1:exon
so has part: feature:94897-95000:-1:exon
so has part: feature:94687-94794:-1:exon
so has part: feature:94508-94588:-1:exon
so has part: feature:94280-94368:-1:exon
so has part: feature:93686-93847:-1:exon
so has part: feature:92771-92968:-1:exon
so has part: feature:92540-92667:-1:exon
so has part: feature:92324-92431:-1:exon
so has part: feature:92091-92207:-1:exon
so has part: feature:91916-92011:-1:exon
so has part: feature:91689-91820:-1:exon
so has part: feature:91266-91369:-1:exon
so has part: feature:90769-90852:-1:exon
so has part: feature:90299-90650:-1:exon

position:95947:-1
position: 95947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95410-95947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95205-95334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94897-95000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94687-94794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94508-94588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94280-94368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93686-93847:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92771-92968:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92540-92667:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92324-92431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92091-92207:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91916-92011:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91689-91820:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:91266-91369:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:90769-90852:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:90299-90650:-1:exon

mus81
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mus81
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: crossover junction endonuclease MUS81 isoform X2
translation: MASGQVQFGRKRAVPGCPNPLFLRWLTELRDSAAEKGQRTQFTYQKAIGSLRKYPLPLRNGREAKILQHFGDGICRILDERLEQYYSEHGPDAPIHSLPEDDAPPPRRNRSAEPPPERPQASPRRRQPAGGGGRRAREYVPQKGSGGYAVLVALYRHSQAAGSCGFLLKSELQREAQPLCDKSFTLPEPGSKYTAWSSVSTLIQKDLLLKTHSPARYSLTEKGRELAERLEKRGSPLKDGAQGSQTVDLTEEEEEEGEEEPQPGETRTECSEEEPAVALPARTGAEDPGLSGAGNSQASGSSKASWGGSSDPTPEVTLLPGTFEILLCVDFIETTGGSSARKQELVLELRRNGVQFDVRKLHVGDFLWVARQRVDFVPAARPPSTRAGAGLHRGAEENGRLVWEHHRRPLPGAEVPAQALWAEEADIPGGELSICNSPEPPREHSEPGHRQHTGCGWVFRQAHAGCPRVCCLPHGHDPVLAEDLREPHPAESLRGRGLGCPAPTAPPLADTPLLSSHLHRLQPGSCEEQGSDGEGSLCSTANADQWHLWRQGCSSSRAVQHCEQSAAGLRQLHHRAGEGETAVLRPIRQTAQESGPRAEPHSVPAVLHARAPALEGLEVPGERWTLGTARRPGQGGGRSSAPRPASRRQEGSSGATAMALPAEEEEEEEGGATSAL
SIO_010081: mus81
subclass of: SO_0000673
so part of: mus81
location: complement(join(90396..90650,90769..90852,91266..91369,91689..91820,91916..92011,92091..92207,92324..92431,92540..92667,92771..92968,93686..93847,94280..94368,94508..94588,94687..94791,94897..95000,95205..95334,95410..95547))
location: region:90396-95547:-1
so has part: feature:95410-95547:-1:exon
so has part: feature:95205-95334:-1:exon
so has part: feature:94897-95000:-1:exon
so has part: feature:94687-94791:-1:exon
so has part: feature:94508-94588:-1:exon
so has part: feature:94280-94368:-1:exon
so has part: feature:93686-93847:-1:exon
so has part: feature:92771-92968:-1:exon
so has part: feature:92540-92667:-1:exon
so has part: feature:92324-92431:-1:exon
so has part: feature:92091-92207:-1:exon
so has part: feature:91916-92011:-1:exon
so has part: feature:91689-91820:-1:exon
so has part: feature:91266-91369:-1:exon
so has part: feature:90769-90852:-1:exon
so has part: feature:90396-90650:-1:exon

XP_015194220.1
type: Protein
SIO_000068: ncbiprotein

position:90396:-1
position: 90396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95547:-1
position: 95547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95410-95547:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95205-95334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94897-95000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94687-94791:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94508-94588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94280-94368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93686-93847:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92771-92968:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92540-92667:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92324-92431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92091-92207:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91916-92011:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91689-91820:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:91266-91369:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:90769-90852:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:90396-90650:-1:exon

mus81
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mus81
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: crossover junction endonuclease MUS81 isoform X3
translation: MASGQVQFGRKRAVPGCPNPLFLRWLTELRDSAAEKGQRTQFTYQKAIGSLRKYPLPLRNGREAKILQHFGDGICRILDERLEQYYSEHGPDAPIHSLPEDDAPPPRRNRSAEPPPERPQASPRKRRQPAGGGGRRAREYVPQKGSGGYAVLVALYRHSQAAGSCGFLLKSELQREAQPLCDKSFTLPEPGSKYTAWSSVSTLIQKDLLLKTHSPARYSLTEKGRELAERLEKRGSPLKDGAQGSQTVDLTEEEEEEGEEEPQPGETRTECEEEPAVALPARTGAEDPGLSGAGNSQASGSSKASWGGSSDPTPEVTLLPGTFEILLCVDFIETTGGSSARKQELVLELRRNGVQFDVRKLHVGDFLWVARQRVDFVPAARPPSTRAGAGLHRGAEENGRLVWEHHRRPLPGAEVPAQALWAEEADIPGGELSICNSPEPPREHSEPGHRQHTGCGWVFRQAHAGCPRVCCLPHGHDPVLAEDLREPHPAESLRGRGLGCPAPTAPPLADTPLLSSHLHRLQPGSCEEQGSDGEGSLCSTANADQWHLWRQGCSSSRAVQHCEQSAAGLRQLHHRAGEGETAVLRPIRQTAQESGPRAEPHSVPAVLHARAPALEGLEVPGERWTLGTARRPGQGGGRSSAPRPASRRQEGSSGATAMALPAEEEEEEEGGATSAL
SIO_010081: mus81
subclass of: SO_0000673
so part of: mus81
location: complement(join(90396..90650,90769..90852,91266..91369,91689..91820,91916..92011,92091..92207,92324..92431,92540..92667,92771..92965,93686..93847,94280..94368,94508..94588,94687..94794,94897..95000,95205..95334,95410..95547))
location: region:90396-95547:-1
so has part: feature:95410-95547:-1:exon
so has part: feature:95205-95334:-1:exon
so has part: feature:94897-95000:-1:exon
so has part: feature:94687-94794:-1:exon
so has part: feature:94508-94588:-1:exon
so has part: feature:94280-94368:-1:exon
so has part: feature:93686-93847:-1:exon
so has part: feature:92771-92965:-1:exon
so has part: feature:92540-92667:-1:exon
so has part: feature:92324-92431:-1:exon
so has part: feature:92091-92207:-1:exon
so has part: feature:91916-92011:-1:exon
so has part: feature:91689-91820:-1:exon
so has part: feature:91266-91369:-1:exon
so has part: feature:90769-90852:-1:exon
so has part: feature:90396-90650:-1:exon

XP_015194221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95410-95547:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95205-95334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94897-95000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94687-94794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94508-94588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94280-94368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93686-93847:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92771-92965:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92540-92667:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92324-92431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92091-92207:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91916-92011:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91689-91820:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:91266-91369:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:90769-90852:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:90396-90650:-1:exon

mus81
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mus81
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: crossover junction endonuclease MUS81 isoform X1
translation: MASGQVQFGRKRAVPGCPNPLFLRWLTELRDSAAEKGQRTQFTYQKAIGSLRKYPLPLRNGREAKILQHFGDGICRILDERLEQYYSEHGPDAPIHSLPEDDAPPPRRNRSAEPPPERPQASPRKRRQPAGGGGRRAREYVPQKGSGGYAVLVALYRHSQAAGSCGFLLKSELQREAQPLCDKSFTLPEPGSKYTAWSSVSTLIQKDLLLKTHSPARYSLTEKGRELAERLEKRGSPLKDGAQGSQTVDLTEEEEEEGEEEPQPGETRTECSEEEPAVALPARTGAEDPGLSGAGNSQASGSSKASWGGSSDPTPEVTLLPGTFEILLCVDFIETTGGSSARKQELVLELRRNGVQFDVRKLHVGDFLWVARQRVDFVPAARPPSTRAGAGLHRGAEENGRLVWEHHRRPLPGAEVPAQALWAEEADIPGGELSICNSPEPPREHSEPGHRQHTGCGWVFRQAHAGCPRVCCLPHGHDPVLAEDLREPHPAESLRGRGLGCPAPTAPPLADTPLLSSHLHRLQPGSCEEQGSDGEGSLCSTANADQWHLWRQGCSSSRAVQHCEQSAAGLRQLHHRAGEGETAVLRPIRQTAQESGPRAEPHSVPAVLHARAPALEGLEVPGERWTLGTARRPGQGGGRSSAPRPASRRQEGSSGATAMALPAEEEEEEEGGATSAL
SIO_010081: mus81
subclass of: SO_0000673
so part of: mus81
location: complement(join(90396..90650,90769..90852,91266..91369,91689..91820,91916..92011,92091..92207,92324..92431,92540..92667,92771..92968,93686..93847,94280..94368,94508..94588,94687..94794,94897..95000,95205..95334,95410..95547))
location: region:90396-95547:-1
so has part: feature:95410-95547:-1:exon
so has part: feature:95205-95334:-1:exon
so has part: feature:94897-95000:-1:exon
so has part: feature:94687-94794:-1:exon
so has part: feature:94508-94588:-1:exon
so has part: feature:94280-94368:-1:exon
so has part: feature:93686-93847:-1:exon
so has part: feature:92771-92968:-1:exon
so has part: feature:92540-92667:-1:exon
so has part: feature:92324-92431:-1:exon
so has part: feature:92091-92207:-1:exon
so has part: feature:91916-92011:-1:exon
so has part: feature:91689-91820:-1:exon
so has part: feature:91266-91369:-1:exon
so has part: feature:90769-90852:-1:exon
so has part: feature:90396-90650:-1:exon

XP_015194219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95410-95547:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95205-95334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94897-95000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94687-94794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94508-94588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94280-94368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93686-93847:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92771-92968:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92540-92667:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92324-92431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92091-92207:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91916-92011:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91689-91820:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:91266-91369:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:90769-90852:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:90396-90650:-1:exon

mus81
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mus81
product: MUS81 structure-specific endonuclease subunit, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006642770.2
SIO_010081: mus81
subclass of: SO_0000673
so part of: mus81
location: complement(join(90492..90650,90769..90852,91266..91369,91689..91820,91916..92011,92091..92207,92324..92436,92540..92667,92771..92968,93686..93847,94280..94368,94508..94588,94687..94794,94897..95000,95205..95334,95410..95946))
location: region:90492-95946:-1
so has part: feature:95410-95946:-1:exon
so has part: feature:95205-95334:-1:exon
so has part: feature:94897-95000:-1:exon
so has part: feature:94687-94794:-1:exon
so has part: feature:94508-94588:-1:exon
so has part: feature:94280-94368:-1:exon
so has part: feature:93686-93847:-1:exon
so has part: feature:92771-92968:-1:exon
so has part: feature:92540-92667:-1:exon
so has part: feature:92324-92436:-1:exon
so has part: feature:92091-92207:-1:exon
so has part: feature:91916-92011:-1:exon
so has part: feature:91689-91820:-1:exon
so has part: feature:91266-91369:-1:exon
so has part: feature:90769-90852:-1:exon
so has part: feature:90492-90650:-1:exon

position:90492:-1
position: 90492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95946:-1
position: 95946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95410-95946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95205-95334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94897-95000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94687-94794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94508-94588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94280-94368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93686-93847:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92771-92968:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92540-92667:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92324-92436:-1:exon

position:92436:-1
position: 92436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:92091-92207:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91916-92011:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91689-91820:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:91266-91369:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:90769-90852:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:90492-90650:-1:exon

mus81
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mus81
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: crossover junction endonuclease MUS81 isoform X4
translation: MASGQVQFGRKRAVPGCPNPLFLRWLTELRDSAAEKGQRTQFTYQKAIGSLRKYPLPLRNGREAKILQHFGDGICRILDERLEQYYSEHGPDAPIHSLPEDDAPPPRRNRSAEPPPERPQASPRKRRQPAGGGGRRAREYVPQKGSGGYAVLVALYRHSQAAGSCGFLLKSELQREAQPLCDKSFTLPEPGSKYTAWSSVSTLIQKDLLLKTHSPARYSLTEKGRELAERLEKRGSPLKDGAQGSQTVDLTEEEEEEGEEEPQPGETRTECSEEEPAVALPARTGAEDPGLSGAGNSQASGSSKASWGGSSDPTPEVTLLPGTFEILLCVDFIETTGGSSARKQELVLELRRNGVQFDVRKLHVGDFLWVARQRVDFVPGQLRAPPARELVLDYIVERKRMDDLCGSIIDGRFREQKFRLKRCGLRKPIYLVENYRSATHLSLPESTLSQAIVNTQVVDGFFVKRTQDVRESAAYLTVMTRFLQRIYANRTLQSRSGDEDWGVLPPQPPPSPTPPCSLLTFTDFNQGAVKNKAQTVKEVFARQLMQISGISGDKAAAVLEQYSTVSSLLQAYDSCTTEQERERLLSSVRYGKLHRNLGPVLSRTVCQLYCTPGPLP
SIO_010081: mus81
subclass of: SO_0000673
so part of: mus81
location: complement(join(90584..90650,90769..90852,91266..91369,91689..91820,91916..92011,92091..92207,92324..92436,92540..92667,92771..92968,93686..93847,94280..94368,94508..94588,94687..94794,94897..95000,95205..95334,95410..95547))
location: region:90584-95547:-1
so has part: feature:95410-95547:-1:exon
so has part: feature:95205-95334:-1:exon
so has part: feature:94897-95000:-1:exon
so has part: feature:94687-94794:-1:exon
so has part: feature:94508-94588:-1:exon
so has part: feature:94280-94368:-1:exon
so has part: feature:93686-93847:-1:exon
so has part: feature:92771-92968:-1:exon
so has part: feature:92540-92667:-1:exon
so has part: feature:92324-92436:-1:exon
so has part: feature:92091-92207:-1:exon
so has part: feature:91916-92011:-1:exon
so has part: feature:91689-91820:-1:exon
so has part: feature:91266-91369:-1:exon
so has part: feature:90769-90852:-1:exon
so has part: feature:90584-90650:-1:exon

XP_006642833.1
type: Protein
SIO_000068: ncbiprotein

position:90584:-1
position: 90584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95410-95547:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95205-95334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94897-95000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94687-94794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94508-94588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94280-94368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93686-93847:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92771-92968:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92540-92667:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92324-92436:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92091-92207:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:91916-92011:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91689-91820:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:91266-91369:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:90769-90852:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:90584-90650:-1:exon

ovol1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ovol1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(97209..103583)
location: region:97209-103583:-1
so has part: feature:97209-103583:-1:exon
subclass of: SO_0000010

102697129
type: Gene
SIO_000068: ncbigene

position:97209:-1
position: 97209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103583:-1
position: 103583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97209-103583:-1:exon

ovol1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ovol1
product: ovo-like zinc finger 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_006642771.2
SIO_010081: ovol1
subclass of: SO_0000673
so part of: ovol1
location: complement(join(97209..98747,99305..99494,99644..99849,103023..103583))
location: region:97209-103583:-1
so has part: feature:103023-103583:-1:exon
so has part: feature:99644-99849:-1:exon
so has part: feature:99305-99494:-1:exon
so has part: feature:97209-98747:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103023-103583:-1:exon

position:103023:-1
position: 103023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:99644-99849:-1:exon

position:99644:-1
position: 99644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99849:-1
position: 99849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:99305-99494:-1:exon

position:99305:-1
position: 99305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99494:-1
position: 99494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:97209-98747:-1:exon

position:98747:-1
position: 98747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ovol1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ovol1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative transcription factor Ovo-like 1
translation: MPRAFLVKKPCVSPGKRNWSDLPDDERGEIYIPVSLGVSTCLEESEASPAESALCLSTRPPHTPTLPHAAELPSCTAQGTGQSSEVNGSCLKKTTYVRSKMKVTTGEPPSGELFTCQVCQKSFQFQRMLNRHMKCHNDSKRHLCTYCGKGFNDTFDLKRHVRTHTGVRPYKCGQCEKAFTQRCSLESHMKKIHGVTQQYAYKERRSKLYVCEDCGYTAPTQDSLLQHLHDAHPHSPLLRKTTAKRLAGALHCGSPLQSDDEPQP
SIO_010081: ovol1
subclass of: SO_0000673
so part of: ovol1
location: complement(join(98449..98747,99305..99494,99644..99849,103023..103122))
location: region:98449-103122:-1
so has part: feature:103023-103122:-1:exon
so has part: feature:99644-99849:-1:exon
so has part: feature:99305-99494:-1:exon
so has part: feature:98449-98747:-1:exon

XP_006642834.1
type: Protein
SIO_000068: ncbiprotein

position:98449:-1
position: 98449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103122:-1
position: 103122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103023-103122:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99644-99849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99305-99494:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98449-98747:-1:exon

cfl1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: cfl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(111618..114003)
location: region:111618-114003:-1
so has part: feature:111618-114003:-1:exon
subclass of: SO_0000010

102693264
type: Gene
SIO_000068: ncbigene

position:111618:-1
position: 111618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114003:-1
position: 114003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111618-114003:-1:exon

cfl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cfl1
product: cofilin 1 (non-muscle)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006642755.2
SIO_010081: cfl1
subclass of: SO_0000673
so part of: cfl1
location: complement(join(111618..111955,113812..114003))
location: region:111618-114003:-1
so has part: feature:113812-114003:-1:exon
so has part: feature:111618-111955:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113812-114003:-1:exon

position:113812:-1
position: 113812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:111618-111955:-1:exon

position:111955:-1
position: 111955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cfl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cfl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cofilin-1
translation: MNPCGRRARSPDAAPSPYGGAACLAPVLSVRDPGQTSKCLEQLIQLCSPAPRSSQADKMTSGVTVTDDVIMVFNEMKVRKAQAGEEEKRRRKKAVLFCLSEDKKHIVLEEGREILLGEVGTTIDDPYLHFVKMLPPDDCRYALYDATYETKETKKEDLVFIFW
SIO_010081: cfl1
subclass of: SO_0000673
so part of: cfl1
location: complement(join(111641..111955,113812..113988))
location: region:111641-113988:-1
so has part: feature:113812-113988:-1:exon
so has part: feature:111641-111955:-1:exon

XP_006642818.2
type: Protein
SIO_000068: ncbiprotein

position:111641:-1
position: 111641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113988:-1
position: 113988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113812-113988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111641-111955:-1:exon

LOC102697332
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102697332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(118179..124921)
location: region:118179-124921:-1
so has part: feature:118179-124921:-1:exon
subclass of: SO_0000010

102697332
type: Gene
SIO_000068: ncbigene

position:118179:-1
position: 118179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124921:-1
position: 124921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118179-124921:-1:exon

LOC102697332
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102697332
product: atlastin-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015338738.1
SIO_010081: LOC102697332
subclass of: SO_0000673
so part of: LOC102697332
location: complement(join(118179..118455,118547..118978,119215..119286,120182..120238,120714..120841,121205..121343,121696..121788,122500..122556,122660..122710,122948..123052,123770..123907,124693..124921))
location: region:118179-124921:-1
so has part: feature:124693-124921:-1:exon
so has part: feature:123770-123907:-1:exon
so has part: feature:122948-123052:-1:exon
so has part: feature:122660-122710:-1:exon
so has part: feature:122500-122556:-1:exon
so has part: feature:121696-121788:-1:exon
so has part: feature:121205-121343:-1:exon
so has part: feature:120714-120841:-1:exon
so has part: feature:120182-120238:-1:exon
so has part: feature:119215-119286:-1:exon
so has part: feature:118547-118978:-1:exon
so has part: feature:118179-118455:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124693-124921:-1:exon

position:124693:-1
position: 124693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:123770-123907:-1:exon

position:123770:-1
position: 123770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123907:-1
position: 123907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:122948-123052:-1:exon

position:122948:-1
position: 122948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123052:-1
position: 123052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:122660-122710:-1:exon

position:122660:-1
position: 122660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122710:-1
position: 122710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:122500-122556:-1:exon

position:122500:-1
position: 122500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122556:-1
position: 122556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:121696-121788:-1:exon

position:121696:-1
position: 121696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121788:-1
position: 121788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:121205-121343:-1:exon

position:121205:-1
position: 121205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121343:-1
position: 121343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:120714-120841:-1:exon

position:120714:-1
position: 120714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120841:-1
position: 120841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:120182-120238:-1:exon

position:120182:-1
position: 120182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120238:-1
position: 120238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:119215-119286:-1:exon

position:119215:-1
position: 119215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119286:-1
position: 119286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:118547-118978:-1:exon

position:118547:-1
position: 118547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118978:-1
position: 118978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:118179-118455:-1:exon

position:118455:-1
position: 118455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102697332
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102697332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: atlastin-3-like
translation: MGGASEPRPVQIVSVHKEDHSFSLDAKALEAVLLRPEVRDLDVAVVSVAGAFRKGKSFLLDFMLRYMKRKDEAGDWLGSDTEPLTGFSWRGGSDPETTGIQIWSEVFVVEKPNGKEVAVLLMDTQGAFDSQSTVKDCATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFLKPFQSLMFLIRDWSFPYEYSYGLKGGMQFLDKRLQVKDAQHEEIQTVRKHIHSCFSNVSCFLLPHPGLKVATSPSFSGQLSDIAAEFKSELQTFIPLVLQPQKLMEKEINGAKVTCRGLLEYFKAYIKIYQGEDLPHPKSMLQATAEANNLAAVAAAKDLYYKQMEKVCGGDLPYVAPESLEEKHAFHCAEALELFGRTKKMGGATFSERYRQQLAGDLEQLWADFQKHNQSKNVFSAFRTPAVLFVLLAGLYLLSGLAGFVGLALVAGLCNCGIGLALAAMLAWALIRYSGQYREVGQAIDSSAGFMLEKATVVINSTRGAAVQQGKKSS
SIO_010081: LOC102697332
subclass of: SO_0000673
so part of: LOC102697332
location: complement(join(118393..118455,118547..118978,119215..119286,120182..120238,120714..120841,121205..121343,121696..121788,122500..122556,122660..122710,122948..123052,123770..123907,124693..124902))
location: region:118393-124902:-1
so has part: feature:124693-124902:-1:exon
so has part: feature:123770-123907:-1:exon
so has part: feature:122948-123052:-1:exon
so has part: feature:122660-122710:-1:exon
so has part: feature:122500-122556:-1:exon
so has part: feature:121696-121788:-1:exon
so has part: feature:121205-121343:-1:exon
so has part: feature:120714-120841:-1:exon
so has part: feature:120182-120238:-1:exon
so has part: feature:119215-119286:-1:exon
so has part: feature:118547-118978:-1:exon
so has part: feature:118393-118455:-1:exon

XP_015194224.1
type: Protein
SIO_000068: ncbiprotein

position:118393:-1
position: 118393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124902:-1
position: 124902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124693-124902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123770-123907:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:122948-123052:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122660-122710:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122500-122556:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:121696-121788:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:121205-121343:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120714-120841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120182-120238:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:119215-119286:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:118547-118978:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:118393-118455:-1:exon

LOC107075843
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075843
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(130424..137319)
location: region:130424-137319:-1
so has part: feature:130424-137319:-1:exon
subclass of: SO_0000010

107075843
type: Gene
SIO_000068: ncbigene

position:130424:-1
position: 130424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137319:-1
position: 137319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130424-137319:-1:exon

LOC107075843
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107075843
product: uncharacterized LOC107075843
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338741.1
SIO_010081: LOC107075843
subclass of: SO_0000673
so part of: LOC107075843
location: complement(join(130424..131044,131198..131670,136532..137091,137308..137319))
location: region:130424-137319:-1
so has part: feature:137308-137319:-1:exon
so has part: feature:136532-137091:-1:exon
so has part: feature:131198-131670:-1:exon
so has part: feature:130424-131044:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137308-137319:-1:exon

position:137308:-1
position: 137308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:136532-137091:-1:exon

position:136532:-1
position: 136532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137091:-1
position: 137091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:131198-131670:-1:exon

position:131198:-1
position: 131198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131670:-1
position: 131670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:130424-131044:-1:exon

position:131044:-1
position: 131044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107075843
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107075843
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107075843
translation: MGLLVSAAPGPSSAWRPGSDVLSDTDLPPRADTPPAETLALREAGVSSPQTGAFSRSVTAPQTGRSRGPGTPSPPPRRTCERALHGGRRAGEDGVSVSTFLSLLPTSLPAPSSRQDRPEQDRPAVLTRVSAVQAEVRDPEPLRALPGETCPAFMSQKENLPPPPLRFLGNQRTLCEPPTGPHLKTQRRRIPETDARRVSLETSAIRDFLAAPPSPTLGGRRRRLAWGGAEAGEGVPRAGEQEEGGGDRERAETDAGSAPQGAAAQRGHSPSRGASCSPQGERVGSLLDSLGSLAVMHSKLAETCRGYGQGRPHSARRDCLHGDSYCGQGRHGNHFHSHTRAPSPSHSHRLTPSHSPSHTRAPSPSHSHCLTPSHSRDRGVQAGAGGPVQGSGSDPAVGSSGLGSLGNLGSPPRTGAASAASGSQTGLSSSGRGSLECGGAPLGDPCSPTPPPERGRGSQRSSGAGLAGVRKGDRPREEPLGAVGSLAVLKDFFR
SIO_010081: LOC107075843
subclass of: SO_0000673
so part of: LOC107075843
location: complement(join(130605..131044,131198..131670,136532..137091,137308..137319))
location: region:130605-137319:-1
so has part: feature:137308-137319:-1:exon
so has part: feature:136532-137091:-1:exon
so has part: feature:131198-131670:-1:exon
so has part: feature:130605-131044:-1:exon

XP_015194227.1
type: Protein
SIO_000068: ncbiprotein

position:130605:-1
position: 130605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137308-137319:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136532-137091:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:131198-131670:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130605-131044:-1:exon

LOC102697524
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102697524
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 135968..140759
location: region:135968-140759:1
so has part: feature:135968-140759:1:exon
subclass of: SO_0000010

102697524
type: Gene
SIO_000068: ncbigene

position:135968:1
position: 135968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140759:1
position: 140759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135968-140759:1:exon

LOC102697524
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102697524
product: forkhead box protein N2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_006642773.2
SIO_010081: LOC102697524
subclass of: SO_0000673
so part of: LOC102697524
location: join(135968..136723,137535..137994,138751..138860,138974..139035,139485..140759)
location: region:135968-140759:1
so has part: feature:135968-136723:1:exon
so has part: feature:137535-137994:1:exon
so has part: feature:138751-138860:1:exon
so has part: feature:138974-139035:1:exon
so has part: feature:139485-140759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:135968-136723:1:exon

position:136723:1
position: 136723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:137535-137994:1:exon

position:137535:1
position: 137535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137994:1
position: 137994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:138751-138860:1:exon

position:138751:1
position: 138751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138860:1
position: 138860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:138974-139035:1:exon

position:138974:1
position: 138974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139035:1
position: 139035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:139485-140759:1:exon

position:139485:1
position: 139485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102697524
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102697524
product: forkhead box protein N2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015338739.1
SIO_010081: LOC102697524
subclass of: SO_0000673
so part of: LOC102697524
location: join(135968..136722,137530..137994,138751..138860,138974..139035,139485..140759)
location: region:135968-140759:1
so has part: feature:135968-136722:1:exon
so has part: feature:137530-137994:1:exon
so has part: feature:138751-138860:1:exon
so has part: feature:138974-139035:1:exon
so has part: feature:139485-140759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:135968-136722:1:exon

position:136722:1
position: 136722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:137530-137994:1:exon

position:137530:1
position: 137530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:138751-138860:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138974-139035:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:139485-140759:1:exon

LOC102697524
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102697524
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein N2-like
translation: MEPADARLCPAPALRPLPAPAPPAAWREPGSGELGLQGCADEDLTCLSWLHQSTDLLHELRLGETQPPQSPPSPPAKPPYSFSSLIFMAIEGSPHKQLPVKEIYQWILSSFPYYRLAPAGWKNSVRHNLSLSKCFLRVGREQGRSVGKGSLWSVAPEYRSVLLEALRKTNSLNTVHTLPGLSEVTVSGETVVCGAERVEYNEPLSPSLPLSPAPVLLGDPGPWETSPVPSDPSEDHNYSIYQLATSLAGGVALQLEVGVEEELVAMEAMELGVAEKDPLADSGYIEYHEYLVLPGEPGLDLETVEILQLDQELQEAAGSLLNLAGGGYSH
SIO_010081: LOC102697524
subclass of: SO_0000673
so part of: LOC102697524
location: join(137563..137994,138751..138860,138974..139035,139485..139873)
location: region:137563-139873:1
so has part: feature:137563-137994:1:exon
so has part: feature:138751-138860:1:exon
so has part: feature:138974-139035:1:exon
so has part: feature:139485-139873:1:exon

XP_006642836.1
type: Protein
SIO_000068: ncbiprotein

position:137563:1
position: 137563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139873:1
position: 139873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137563-137994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138751-138860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138974-139035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139485-139873:1:exon

LOC102697524
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102697524
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein N2-like
translation: MEPADARLCPAPALRPLPAPAPPAAWREPGSGELGLQGCADEDLTCLSWLHQSTDLLHELRLGETQPPQSPPSPPAKPPYSFSSLIFMAIEGSPHKQLPVKEIYQWILSSFPYYRLAPAGWKNSVRHNLSLSKCFLRVGREQGRSVGKGSLWSVAPEYRSVLLEALRKTNSLNTVHTLPGLSEVTVSGETVVCGAERVEYNEPLSPSLPLSPAPVLLGDPGPWETSPVPSDPSEDHNYSIYQLATSLAGGVALQLEVGVEEELVAMEAMELGVAEKDPLADSGYIEYHEYLVLPGEPGLDLETVEILQLDQELQEAAGSLLNLAGGGYSH
SIO_010081: LOC102697524
subclass of: SO_0000673
so part of: LOC102697524
location: join(137563..137994,138751..138860,138974..139035,139485..139873)
location: region:137563-139873:1
so has part: feature:137563-137994:1:exon
so has part: feature:138751-138860:1:exon
so has part: feature:138974-139035:1:exon
so has part: feature:139485-139873:1:exon

XP_015194225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137563-137994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138751-138860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138974-139035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139485-139873:1:exon

tmem223
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: tmem223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(142858..143841)
location: region:142858-143841:-1
so has part: feature:142858-143841:-1:exon
subclass of: SO_0000010

102697718
type: Gene
SIO_000068: ncbigene

position:142858:-1
position: 142858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143841:-1
position: 143841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142858-143841:-1:exon

tmem223
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: tmem223
product: transmembrane protein 223
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338736.1
SIO_010081: tmem223
subclass of: SO_0000673
so part of: tmem223
location: complement(142858..143841)
location: region:142858-143841:-1
so has part: feature:142858-143841:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142858-143841:-1:exon

tmem223
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: tmem223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 223
translation: MSFRLVLHSLCGRYRLLQGFELGPLCRFGPGVTRQCSAGTARSGWVSGLLALRSGLDQAFGAKRRTLSRFSRTGGGGSLAQPARGIVSTNVPKDVLLFEHERTGFFRLMGLFCAGQFVFWTYLAHFAFTSLRDTGLRDAVIVGEEARNLPKLGGVSLNLGSDKWRYGFTGSCLTLGKSVDRPAGGQSSSCPVCSNSVWTGQFLDCVQ
SIO_010081: tmem223
subclass of: SO_0000673
so part of: tmem223
location: complement(143022..143645)
location: region:143022-143645:-1
so has part: feature:143022-143645:-1:exon

XP_015194222.1
type: Protein
SIO_000068: ncbiprotein

position:143022:-1
position: 143022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143645:-1
position: 143645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143022-143645:-1:exon

LOC102697917
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102697917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(144119..146743)
location: region:144119-146743:-1
so has part: feature:144119-146743:-1:exon
subclass of: SO_0000010

102697917
type: Gene
SIO_000068: ncbigene

position:144119:-1
position: 144119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146743:-1
position: 146743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144119-146743:-1:exon

LOC102697917
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102697917
product: protein YIF1A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006642775.2
SIO_010081: LOC102697917
subclass of: SO_0000673
so part of: LOC102697917
location: complement(join(144119..145077,145154..145247,146096..146251,146343..146400,146614..146743))
location: region:144119-146743:-1
so has part: feature:146614-146743:-1:exon
so has part: feature:146343-146400:-1:exon
so has part: feature:146096-146251:-1:exon
so has part: feature:145154-145247:-1:exon
so has part: feature:144119-145077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146614-146743:-1:exon

position:146614:-1
position: 146614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146343-146400:-1:exon

position:146343:-1
position: 146343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146400:-1
position: 146400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:146096-146251:-1:exon

position:146096:-1
position: 146096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146251:-1
position: 146251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:145154-145247:-1:exon

position:145154:-1
position: 145154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145247:-1
position: 145247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:144119-145077:-1:exon

position:145077:-1
position: 145077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102697917
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102697917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein YIF1A-like
translation: MNKLIELILFLQDWEVRYHRDSPMTPRHDVNAPDLYIPTMAFITYILLAGMALGIQQRFSPEVLGLCASTALVWIIIEVLALLLSLYLVTVHSDLTTFDLLAYCGYKYVGMILTVLCGLLFGSDGYYVALAWSSCALMYFIVRSLRMKILSSVSADGMGGHNSRNRLRMYITVATAAFQPIIIYWLTFHLIR
SIO_010081: LOC102697917
subclass of: SO_0000673
so part of: LOC102697917
location: complement(join(144922..145077,145154..145247,146096..146251,146343..146400,146614..146728))
location: region:144922-146728:-1
so has part: feature:146614-146728:-1:exon
so has part: feature:146343-146400:-1:exon
so has part: feature:146096-146251:-1:exon
so has part: feature:145154-145247:-1:exon
so has part: feature:144922-145077:-1:exon

XP_006642838.1
type: Protein
SIO_000068: ncbiprotein

position:144922:-1
position: 144922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146728:-1
position: 146728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146614-146728:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146343-146400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146096-146251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145154-145247:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144922-145077:-1:exon

LOC107075863
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075863
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 155524..158595
location: region:155524-158595:1
so has part: feature:155524-158595:1:exon
subclass of: SO_0000011

107075863
type: Gene
SIO_000068: ncbigene

position:155524:1
position: 155524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158595:1
position: 158595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155524-158595:1:exon

LOC107075863
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075863
product: uncharacterized LOC107075863
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001477358.1
SIO_010081: LOC107075863
subclass of: SO_0000673
so part of: LOC107075863
location: join(155524..155726,156471..156739,158185..158595)
location: region:155524-158595:1
so has part: feature:155524-155726:1:exon
so has part: feature:156471-156739:1:exon
so has part: feature:158185-158595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155524-155726:1:exon

position:155726:1
position: 155726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:156471-156739:1:exon

position:156471:1
position: 156471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156739:1
position: 156739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:158185-158595:1:exon

position:158185:1
position: 158185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102693466
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102693466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 161559..171996
location: region:161559-171996:1
so has part: feature:161559-171996:1:exon
subclass of: SO_0000010

102693466
type: Gene
SIO_000068: ncbigene

position:161559:1
position: 161559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171996:1
position: 171996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161559-171996:1:exon

LOC102693466
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102693466
product: EH domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 23 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_006642756.2
SIO_010081: LOC102693466
subclass of: SO_0000673
so part of: LOC102693466
location: join(161559..161987,164829..164926,169793..170236,170976..171996)
location: region:161559-171996:1
so has part: feature:161559-161987:1:exon
so has part: feature:164829-164926:1:exon
so has part: feature:169793-170236:1:exon
so has part: feature:170976-171996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:161559-161987:1:exon

position:161987:1
position: 161987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:164829-164926:1:exon

position:164829:1
position: 164829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164926:1
position: 164926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:169793-170236:1:exon

position:169793:1
position: 169793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170236:1
position: 170236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:170976-171996:1:exon

position:170976:1
position: 170976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102693466
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102693466
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:171011..171013,aa:OTHER)
product: LOW QUALITY PROTEIN: EH domain-containing protein 1-like
translation: MFSWASKDGRRKKDPELFQTVSDGLRRLYRNKLLPLEDAYRFHDFHSPALEDADFDNKPMVLLVGQYSTGKTTFIRHLMEQDFPGMRIGPEPTTDSFIAVMYGEQEGVVPGNALVVDPKKPFRKLNAFGNAFLNRFMCAQMPNPVLESISIIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRIILLFDAHKLDISDEFSEVIRALKNHEDKMRVVLNKADQIETQQLMRVYGALMWSLGKIVNTPEVVRVYIGSFWAQPLLVPDNRKLFEAEEQDLFRDIQGLPRNAALRKLNDLIKRARLAKVTARRRAARLRHDSSSSRPLRPXLLLLSPRKAVTPPPLSVQELLATQDFSKFQSLKPKLMEAVEDMLANDIARLMTLVRQEEAAMPSQAVKGGAFEGTMNGPFGHGYGEGAGEGIDEIEWVVGRDKPNYDEIFYTLSPVNGKVSGASAKREMVKSKLPNTVLGKIWKLADVDKDGFLDDEEFALANHLIKVKLEGHELPADLPPHLVPPSKRGTAQ
SIO_010081: LOC102693466
subclass of: SO_0000673
so part of: LOC102693466
location: join(161584..161987,164829..164926,169793..170236,170976..171595)
location: region:161584-171595:1
so has part: feature:161584-161987:1:exon
so has part: feature:164829-164926:1:exon
so has part: feature:169793-170236:1:exon
so has part: feature:170976-171595:1:exon

XP_006642819.1
type: Protein
SIO_000068: ncbiprotein

position:161584:1
position: 161584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171595:1
position: 171595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161584-161987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164829-164926:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:169793-170236:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170976-171595:1:exon

LOC107075844
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075844
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 179069..183271
location: region:179069-183271:1
so has part: feature:179069-183271:1:exon
subclass of: SO_0000010

107075844
type: Gene
SIO_000068: ncbigene

position:179069:1
position: 179069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183271:1
position: 183271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179069-183271:1:exon

LOC107075844
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107075844
product: dapper homolog 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338742.1
SIO_010081: LOC107075844
subclass of: SO_0000673
so part of: LOC107075844
location: join(179069..179127,180709..180962,181067..181261,181360..182073,183216..183271)
location: region:179069-183271:1
so has part: feature:179069-179127:1:exon
so has part: feature:180709-180962:1:exon
so has part: feature:181067-181261:1:exon
so has part: feature:181360-182073:1:exon
so has part: feature:183216-183271:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179069-179127:1:exon

position:179127:1
position: 179127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:180709-180962:1:exon

position:180709:1
position: 180709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180962:1
position: 180962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:181067-181261:1:exon

position:181067:1
position: 181067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181261:1
position: 181261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:181360-182073:1:exon

position:181360:1
position: 181360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182073:1
position: 182073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:183216-183271:1:exon

position:183216:1
position: 183216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107075844
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107075844
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dapper homolog 2-like
translation: MEEERGMDEVEERERGEEGRINDHPDCVAHGLQSLCSCCPERPRGPLGSSAERCASLQTPGCEDSADCRWSAVSWDALALPDPEAVSADPPGAARPTCDSRPSSGFYSVSGSSLSASCGSVCSEGPGGPWARRPHSADHSAAQWPGARLQPAPLQQTRPERGERRPVSTGDLEILRGFLSLSDLCPGLGGRSPGSPSTSSHRPPASFCWDPRFPLDPKFCSDLVSRKTKEVYPYPSPLHAVALQSPLYAPCGASNPEPDEGGGGEEVPRCPCGPSPPDPPGPARADRYIGQLLRRYRRRPGSVLLSALDPGPAGRWQAKSLSLSSVCSGSTSSTLTGGALPSVPSLGSLGSSGSTPQAVWGGRRWVPSPAEDEEGRSDRGGSLRGLGGDGLYRGKHYSRVLVRAATLVRKSFEDVHSKTHSREAL
SIO_010081: LOC107075844
subclass of: SO_0000673
so part of: LOC107075844
location: join(179069..179127,180709..180962,181067..181261,181360..182073,183216..183271)
location: region:179069-183271:1
so has part: feature:179069-179127:1:exon
so has part: feature:180709-180962:1:exon
so has part: feature:181067-181261:1:exon
so has part: feature:181360-182073:1:exon
so has part: feature:183216-183271:1:exon

XP_015194228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179069-179127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180709-180962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181067-181261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:181360-182073:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:183216-183271:1:exon

ttc9c
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ttc9c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(183517..188290)
location: region:183517-188290:-1
so has part: feature:183517-188290:-1:exon
subclass of: SO_0000010

102698114
type: Gene
SIO_000068: ncbigene

position:183517:-1
position: 183517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188290:-1
position: 188290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183517-188290:-1:exon

ttc9c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ttc9c
product: tetratricopeptide repeat domain 9C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338743.1
SIO_010081: ttc9c
subclass of: SO_0000673
so part of: ttc9c
location: complement(join(183517..183580,185269..185326,186236..186418,187235..187586,188187..188290))
location: region:183517-188290:-1
so has part: feature:188187-188290:-1:exon
so has part: feature:187235-187586:-1:exon
so has part: feature:186236-186418:-1:exon
so has part: feature:185269-185326:-1:exon
so has part: feature:183517-183580:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188187-188290:-1:exon

position:188187:-1
position: 188187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:187235-187586:-1:exon

position:187235:-1
position: 187235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187586:-1
position: 187586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:186236-186418:-1:exon

position:186236:-1
position: 186236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186418:-1
position: 186418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:185269-185326:-1:exon

position:185269:-1
position: 185269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185326:-1
position: 185326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:183517-183580:-1:exon

position:183580:-1
position: 183580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ttc9c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ttc9c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 9C
translation: MAEEGAAGWGAELGPEGAGSERGPGEGPAGCSRGGAGPGAPEAEAQLQEAVLRKAQGNELYRDRRYRAAIGKYHRALLLLRGLDPEVTAPMRSFVAQRAVLSAQQEALLRSTQVDCYNNLAACLLQRPLVDYARVREYSLRVLRWREGDVKALYRAGVATLQLGDPRTARQYLLQASRGQPHDANVRKYLRLTEERLSSDHENPSRRLLSSSSVKAKKFISA
SIO_010081: ttc9c
subclass of: SO_0000673
so part of: ttc9c
location: complement(join(183517..183580,185269..185326,186236..186418,187235..187586,188187..188198))
location: region:183517-188198:-1
so has part: feature:188187-188198:-1:exon
so has part: feature:187235-187586:-1:exon
so has part: feature:186236-186418:-1:exon
so has part: feature:185269-185326:-1:exon
so has part: feature:183517-183580:-1:exon

XP_015194229.1
type: Protein
SIO_000068: ncbiprotein

position:188198:-1
position: 188198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188187-188198:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187235-187586:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186236-186418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185269-185326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:183517-183580:-1:exon

LOC102698316
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102698316
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 188861..192217
location: region:188861-192217:1
so has part: feature:188861-192217:1:exon
subclass of: SO_0000010

102698316
type: Gene
SIO_000068: ncbigene

position:188861:1
position: 188861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192217:1
position: 192217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188861-192217:1:exon

LOC102698316
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102698316
product: transmembrane protein 179-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006642777.2
SIO_010081: LOC102698316
subclass of: SO_0000673
so part of: LOC102698316
location: join(188861..189345,189437..189574,189920..189998,190252..192217)
location: region:188861-192217:1
so has part: feature:188861-189345:1:exon
so has part: feature:189437-189574:1:exon
so has part: feature:189920-189998:1:exon
so has part: feature:190252-192217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188861-189345:1:exon

position:189345:1
position: 189345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:189437-189574:1:exon

position:189437:1
position: 189437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189574:1
position: 189574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:189920-189998:1:exon

position:189920:1
position: 189920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189998:1
position: 189998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:190252-192217:1:exon

position:190252:1
position: 190252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102698316
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102698316
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 179-like
translation: MAPQRRLLLAHGAAYALSVLGGLLTVVPLALNGSHFKGRCLLFSRGHWRPEGGLGAPRLQVLEWGPPAACQLPAFVGVFTVLFGAVQSWRSLFYLQRGHDDTPLCSALTLLLSASLLLLSLGSSVTLSLGFQSWCDTVTGQQAAPFSCAEAQATPLYLDVDTTAFYSELTWAQAGLWGVSVLWLALSVLSFLRLYCSHRREVLGPCLAREKELLLGLGCDPQPMTSHPCTHEHPAGHFI
SIO_010081: LOC102698316
subclass of: SO_0000673
so part of: LOC102698316
location: join(189044..189345,189437..189574,189920..189998,190252..190452)
location: region:189044-190452:1
so has part: feature:189044-189345:1:exon
so has part: feature:189437-189574:1:exon
so has part: feature:189920-189998:1:exon
so has part: feature:190252-190452:1:exon

XP_006642840.1
type: Protein
SIO_000068: ncbiprotein

position:189044:1
position: 189044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190452:1
position: 190452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189044-189345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:189437-189574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:189920-189998:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:190252-190452:1:exon

hnrnpul2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: hnrnpul2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 192212..198717
location: region:192212-198717:1
so has part: feature:192212-198717:1:exon
subclass of: SO_0000010

102698518
type: Gene
SIO_000068: ncbigene

position:192212:1
position: 192212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198717:1
position: 198717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192212-198717:1:exon

hnrnpul2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: hnrnpul2
product: heterogeneous nuclear ribonucleoprotein U-like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338744.1
SIO_010081: hnrnpul2
subclass of: SO_0000673
so part of: hnrnpul2
location: join(192212..192781,194320..194554,194648..194747,194847..194905,196558..196861,196957..197172,197392..197462,197556..197663,198341..198717)
location: region:192212-198717:1
so has part: feature:192212-192781:1:exon
so has part: feature:194320-194554:1:exon
so has part: feature:194648-194747:1:exon
so has part: feature:194847-194905:1:exon
so has part: feature:196558-196861:1:exon
so has part: feature:196957-197172:1:exon
so has part: feature:197392-197462:1:exon
so has part: feature:197556-197663:1:exon
so has part: feature:198341-198717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:192212-192781:1:exon

position:192781:1
position: 192781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194320-194554:1:exon

position:194320:1
position: 194320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194554:1
position: 194554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:194648-194747:1:exon

position:194648:1
position: 194648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194747:1
position: 194747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:194847-194905:1:exon

position:194847:1
position: 194847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194905:1
position: 194905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:196558-196861:1:exon

position:196558:1
position: 196558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196861:1
position: 196861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:196957-197172:1:exon

position:196957:1
position: 196957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197172:1
position: 197172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:197392-197462:1:exon

position:197392:1
position: 197392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197462:1
position: 197462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:197556-197663:1:exon

position:197556:1
position: 197556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197663:1
position: 197663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:198341-198717:1:exon

position:198341:1
position: 198341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hnrnpul2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: hnrnpul2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein U-like protein 2
translation: MSALDVKKLKVAELRTELQQRGLDTRGLKADLVERLLAAIEAETAGAAPGEAGDVGPTEVDAGEPQEAPGGETEAVELTAGDQQSIAGVEEEEEEEEEEEVAQATEAESARPEPLEALGPSDAGPQPPEQAPREAETPVEAAPPTVDVQPDPKPLSEAEEAVSPAQASPAPSPQRPAAQEPQVMLSRGSLYLGGSPGGVCVLCNGSPPCLSPPDNSDLHFEVGKGALGGQPLFSERFPFLWSGCRVTHGVAQGQVGFEAKFVRKLSDKELQPDDPEVPVLRVGWSVDGSSFQLGEDDLSYGYDGRGKKVTGGQVGFVVEGVGFVPGGAGRVQAEAVGFLWCGGLVLLREPSLCARPLQANVYSSAQRRKLLRFKGFQRKAVVVFPTDEEWKRRLGLLQQEEGEEVPEISLLKVKVSFTLPQCSEVLDEVLFSELTKEETEKLLLGYKEEARRLLPAPPKRKKNRNRRKPPPQPGRPPRPGDRDRGYGGGRGGYIQRPYGQPQPYWGPQRGEYRPFFSQYCTEYDTFYNRGYNPQRYRDYYRQYTGEWDRYYQDQDRYGYSGGHRNYNYGGGGNYRGYR
SIO_010081: hnrnpul2
subclass of: SO_0000673
so part of: hnrnpul2
location: join(192237..192781,194320..194554,194648..194747,194847..194905,196558..196861,196957..197172,197392..197462,197556..197663,198341..198439)
location: region:192237-198439:1
so has part: feature:192237-192781:1:exon
so has part: feature:194320-194554:1:exon
so has part: feature:194648-194747:1:exon
so has part: feature:194847-194905:1:exon
so has part: feature:196558-196861:1:exon
so has part: feature:196957-197172:1:exon
so has part: feature:197392-197462:1:exon
so has part: feature:197556-197663:1:exon
so has part: feature:198341-198439:1:exon

XP_015194230.1
type: Protein
SIO_000068: ncbiprotein

position:192237:1
position: 192237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198439:1
position: 198439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192237-192781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194320-194554:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194648-194747:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194847-194905:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196558-196861:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196957-197172:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197392-197462:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197556-197663:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198341-198439:1:exon

LOC102698726
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102698726
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 200781..>210719
location: region:200781-210719:1
so has part: feature:200781-210719:1:exon
subclass of: SO_0000010

102698726
type: Gene
SIO_000068: ncbigene

position:200781:1
position: 200781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210719:1
position: 210719
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200781-210719:1:exon

LOC102698726
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102698726
product: serine/threonine-protein kinase MRCK alpha-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338745.1
SIO_010081: LOC102698726
subclass of: SO_0000673
so part of: LOC102698726
location: join(200781..200911,201249..201330,201804..201902,207687..207770,207866..207961,208096..208193,209449..209542,209780..209980,210417..>210719)
location: region:200781-210719:1
so has part: feature:200781-200911:1:exon
so has part: feature:201249-201330:1:exon
so has part: feature:201804-201902:1:exon
so has part: feature:207687-207770:1:exon
so has part: feature:207866-207961:1:exon
so has part: feature:208096-208193:1:exon
so has part: feature:209449-209542:1:exon
so has part: feature:209780-209980:1:exon
so has part: feature:210417-210719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200781-200911:1:exon

position:200911:1
position: 200911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:201249-201330:1:exon

position:201249:1
position: 201249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201330:1
position: 201330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:201804-201902:1:exon

position:201804:1
position: 201804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201902:1
position: 201902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:207687-207770:1:exon

position:207687:1
position: 207687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207770:1
position: 207770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:207866-207961:1:exon

position:207866:1
position: 207866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207961:1
position: 207961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:208096-208193:1:exon

position:208096:1
position: 208096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208193:1
position: 208193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:209449-209542:1:exon

position:209449:1
position: 209449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209542:1
position: 209542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:209780-209980:1:exon

position:209780:1
position: 209780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209980:1
position: 209980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:210417-210719:1:exon

position:210417:1
position: 210417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102698726
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102698726
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase MRCK alpha-like
translation: MGDPGWWSFRIPGVTFSRGAGSRPRAVRVEPGVQGLGGTGGGRRSSMKTGAGAPSLGGDAEPRFHQAGRTPSSSPGCKTPGEKTGGAGRADWLKALSIKRTASQVAVVKLKDTERVFAMKILHKWEMIKRADTACFREERDVLVKGDNQWITTLHYAFQDDKYLYLVMGSSLSSQYLVMGSSLSSQYLVMGSSLSSQDIKPDNVLIDMNGHIKLADFGSCLRLGSDGKVQSSVAVGTPDYISPEILQAMEDGRGRYGTECDWWSLGVCMYELLFGETPFYAESLLETYSKIMNHKEHLKFPSDVTDVSAEAKDLIGQLICDHDSRLGQKGIQDFRDHPFFQGIKWDRIRSSTPPHIPDVSSPADTSNFDVDDESLKNPVSNPSTPSEPLPVCLSIR
SIO_010081: LOC102698726
subclass of: SO_0000673
so part of: LOC102698726
location: join(200781..200911,201249..201330,201804..201902,207687..207770,207866..207961,208096..208193,209449..209542,209780..209980,210417..>210719)
location: region:200781-210719:1
so has part: feature:200781-200911:1:exon
so has part: feature:201249-201330:1:exon
so has part: feature:201804-201902:1:exon
so has part: feature:207687-207770:1:exon
so has part: feature:207866-207961:1:exon
so has part: feature:208096-208193:1:exon
so has part: feature:209449-209542:1:exon
so has part: feature:209780-209980:1:exon
so has part: feature:210417-210719:1:exon

XP_015194231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200781-200911:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201249-201330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201804-201902:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207687-207770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:207866-207961:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:208096-208193:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:209449-209542:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209780-209980:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210417-210719:1:exon

lrrn4cl
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: lrrn4cl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 225594..228506
location: region:225594-228506:1
so has part: feature:225594-228506:1:exon
subclass of: SO_0000010

102698924
type: Gene
SIO_000068: ncbigene

position:225594:1
position: 225594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228506:1
position: 228506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225594-228506:1:exon

lrrn4cl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: lrrn4cl
product: LRRN4 C-terminal like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_006642780.2
SIO_010081: lrrn4cl
subclass of: SO_0000673
so part of: lrrn4cl
location: join(225594..225755,227597..228506)
location: region:225594-228506:1
so has part: feature:225594-225755:1:exon
so has part: feature:227597-228506:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:225594-225755:1:exon

position:225755:1
position: 225755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227597-228506:1:exon

position:227597:1
position: 227597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

lrrn4cl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: lrrn4cl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LRRN4 C-terminal-like protein
translation: MATNQKTAFLRPFLFILTLIGCCSTDPGSRTGTSPATTRARIIYETGLDFGAYESEDGGEPAGGPRTPAPRPAPASRAGRQVCDYDPCRHEQTPCAALREASGCLCPGVSGPTVTPEPPRLREVVQQGSEVRVHWCAPTSTVERYWVTVEGGAPLVFGERSRVAALAGGMYEVCVAAENGAGRSAPSCSLPQATADASLALQAGLIGGALLLLLLLSLGGLLLWRRRRAHRRAALSAGGLGNPTFGSEPPL
SIO_010081: lrrn4cl
subclass of: SO_0000673
so part of: lrrn4cl
location: 227602..228357
location: region:227602-228357:1
so has part: feature:227602-228357:1:exon

XP_006642843.1
type: Protein
SIO_000068: ncbiprotein

position:227602:1
position: 227602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228357:1
position: 228357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227602-228357:1:exon

LOC107075850
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 230227..235618
location: region:230227-235618:1
so has part: feature:230227-235618:1:exon
subclass of: SO_0000010

107075850
type: Gene
SIO_000068: ncbigene

position:230227:1
position: 230227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235618:1
position: 235618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230227-235618:1:exon

LOC107075850
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107075850
product: pollen-specific leucine-rich repeat extensin-like protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015338793.1
SIO_010081: LOC107075850
subclass of: SO_0000673
so part of: LOC107075850
location: join(230227..230757,231256..231374,231449..231520,231719..231790,232525..232602,233732..235618)
location: region:230227-235618:1
so has part: feature:230227-230757:1:exon
so has part: feature:231256-231374:1:exon
so has part: feature:231449-231520:1:exon
so has part: feature:231719-231790:1:exon
so has part: feature:232525-232602:1:exon
so has part: feature:233732-235618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230227-230757:1:exon

position:230757:1
position: 230757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:231256-231374:1:exon

position:231256:1
position: 231256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231374:1
position: 231374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:231449-231520:1:exon

position:231449:1
position: 231449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231520:1
position: 231520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:231719-231790:1:exon

position:231719:1
position: 231719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231790:1
position: 231790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:232525-232602:1:exon

position:232525:1
position: 232525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232602:1
position: 232602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:233732-235618:1:exon

position:233732:1
position: 233732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107075850
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107075850
product: pollen-specific leucine-rich repeat extensin-like protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015338794.1
SIO_010081: LOC107075850
subclass of: SO_0000673
so part of: LOC107075850
location: join(230227..230757,231256..231374,231449..231520,231719..231790,232525..232602,233735..235618)
location: region:230227-235618:1
so has part: feature:230227-230757:1:exon
so has part: feature:231256-231374:1:exon
so has part: feature:231449-231520:1:exon
so has part: feature:231719-231790:1:exon
so has part: feature:232525-232602:1:exon
so has part: feature:233735-235618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230227-230757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231256-231374:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231449-231520:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:231719-231790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232525-232602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233735-235618:1:exon

position:233735:1
position: 233735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107075850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107075850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETD1B-like isoform X1
translation: MPHCRAFGCSEHSGRRQNLGPGLEKVKLFAFPRDRQLAKRWVTNMGTDIGPLDRFLDEIRHDVHSNKYRLCSRHFTPEMFRRDLEAELTNTEPRLLLKAGAVPTVFPHSKQPARRGRKRKAISALEEQQASSLRAGGAEATGGSKRKRRPASRAAASLQTRKSKGKRVQKRKRRGRNTRDKTAVSVSRETLRFYADASSQMPSQPLQQEPEPAEPSWLFEGVVGRTWEGAGAGVRPALDSRSSVAGSRSVPRESGVKQEGPGDQRDLELRRWPSECVKEEEEECPLGIPGLPKPEPVETAELPGSSPPAGILPVLVKTEAPDVGPALPSLKPERSSPPHARSECRLQTCPESARDTRESWSGPAERPDLGSQLPDIKEENPGWRLPLESALVPAEDRRDSRPARLLSPLSPAQAILVRLPPTGTARAPVQLLLLPALIRGVPGEQPSSASRPAMSSPGSGVSTPVLNPVPTAVSSLVSRPMSSPVPTAVSSTVPTTVCSPMLTAVSKPMSSSVSSSVPRPVSSSVSSSGLALLPVREALPAGVETAPAPGRPPQPPVLPPAPPPQ
SIO_010081: LOC107075850
subclass of: SO_0000673
so part of: LOC107075850
location: join(230490..230757,231256..231374,231449..231520,231719..231790,232525..232602,233732..234820)
location: region:230490-234820:1
so has part: feature:230490-230757:1:exon
so has part: feature:231256-231374:1:exon
so has part: feature:231449-231520:1:exon
so has part: feature:231719-231790:1:exon
so has part: feature:232525-232602:1:exon
so has part: feature:233732-234820:1:exon

XP_015194279.1
type: Protein
SIO_000068: ncbiprotein

position:230490:1
position: 230490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234820:1
position: 234820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230490-230757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231256-231374:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231449-231520:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:231719-231790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232525-232602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233732-234820:1:exon

LOC107075850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107075850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2
translation: MPHCRAFGCSEHSGRRQNLGPGLEKVKLFAFPRDRQLAKRWVTNMGTDIGPLDRFLDEIRHDVHSNKYRLCSRHFTPEMFRRDLEAELTNTEPRLLLKAGAVPTVFPHSKQPARRGRKRKAISALEEQQASSLRAGGAEATGGSKRKRRPASRAAASLQTRKSKGKRVQKRKRRGRNTRDKTAVSVSRETLRFYADASSQMPSPLQQEPEPAEPSWLFEGVVGRTWEGAGAGVRPALDSRSSVAGSRSVPRESGVKQEGPGDQRDLELRRWPSECVKEEEEECPLGIPGLPKPEPVETAELPGSSPPAGILPVLVKTEAPDVGPALPSLKPERSSPPHARSECRLQTCPESARDTRESWSGPAERPDLGSQLPDIKEENPGWRLPLESALVPAEDRRDSRPARLLSPLSPAQAILVRLPPTGTARAPVQLLLLPALIRGVPGEQPSSASRPAMSSPGSGVSTPVLNPVPTAVSSLVSRPMSSPVPTAVSSTVPTTVCSPMLTAVSKPMSSSVSSSVPRPVSSSVSSSGLALLPVREALPAGVETAPAPGRPPQPPVLPPAPPPQ
SIO_010081: LOC107075850
subclass of: SO_0000673
so part of: LOC107075850
location: join(230490..230757,231256..231374,231449..231520,231719..231790,232525..232602,233735..234820)
location: region:230490-234820:1
so has part: feature:230490-230757:1:exon
so has part: feature:231256-231374:1:exon
so has part: feature:231449-231520:1:exon
so has part: feature:231719-231790:1:exon
so has part: feature:232525-232602:1:exon
so has part: feature:233735-234820:1:exon

XP_015194280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230490-230757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231256-231374:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231449-231520:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:231719-231790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232525-232602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233735-234820:1:exon

LOC102699116
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102699116
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(240446..270484)
location: region:240446-270484:-1
so has part: feature:240446-270484:-1:exon
subclass of: SO_0000010

102699116
type: Gene
SIO_000068: ncbigene

position:240446:-1
position: 240446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270484:-1
position: 270484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240446-270484:-1:exon

LOC102699116
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102699116
product: ribosomal protein S6 kinase alpha-5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338746.1
SIO_010081: LOC102699116
subclass of: SO_0000673
so part of: LOC102699116
location: complement(join(240446..241290,241894..242057,242468..242627,242862..243053,243178..243399,268630..268711,268806..268957,269329..269469,269971..270054,270423..270484))
location: region:240446-270484:-1
so has part: feature:270423-270484:-1:exon
so has part: feature:269971-270054:-1:exon
so has part: feature:269329-269469:-1:exon
so has part: feature:268806-268957:-1:exon
so has part: feature:268630-268711:-1:exon
so has part: feature:243178-243399:-1:exon
so has part: feature:242862-243053:-1:exon
so has part: feature:242468-242627:-1:exon
so has part: feature:241894-242057:-1:exon
so has part: feature:240446-241290:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270423-270484:-1:exon

position:270423:-1
position: 270423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:269971-270054:-1:exon

position:269971:-1
position: 269971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270054:-1
position: 270054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:269329-269469:-1:exon

position:269329:-1
position: 269329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269469:-1
position: 269469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:268806-268957:-1:exon

position:268806:-1
position: 268806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268957:-1
position: 268957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:268630-268711:-1:exon

position:268630:-1
position: 268630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268711:-1
position: 268711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:243178-243399:-1:exon

position:243178:-1
position: 243178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243399:-1
position: 243399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:242862-243053:-1:exon

position:242862:-1
position: 242862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243053:-1
position: 243053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:242468-242627:-1:exon

position:242468:-1
position: 242468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242627:-1
position: 242627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:241894-242057:-1:exon

position:241894:-1
position: 241894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242057:-1
position: 242057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:240446-241290:-1:exon

position:241290:-1
position: 241290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102699116
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102699116
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein S6 kinase alpha-5-like
translation: MQDLFTSMAQHIQGLLAQRDSYLERIAELCQEQESLQAQTGLLPPSLARLDDASQGLSVQLADSKAKLRRLRQELEDKGEQLLDYKQEVQAMEAELKKLRQETHTHTHTGSALSLALSQYHMYLVLELLEGGELLERIKRKKLFAEGEASLLMKSLVSAVSFMHDVGVVHRDLKPENLLFADEGEDAALKVIDFGFARLCPAGSMPLQTPCFTLQYAAPELFHSAGYDQACDLWSLGVILYTMLSGQVPFQSGQKGMTSSHAADIMRKIKEGDFSLEGEAWRGVSEEAKDLVRGLLTVDPAKRLKMSVLRENEWLQNGGALSSTPLRTPDVLESCGPTVRTYVNATYKAFNRGKREGFFLKSVDNAPLAKRRKMKMTSTGVETRRSSSSSSSSSSSSSSSHPRAPPPPGSTTPES
SIO_010081: LOC102699116
subclass of: SO_0000673
so part of: LOC102699116
location: complement(join(241087..241290,241894..242057,242468..242627,242862..243053,243178..243399,268630..268711,268806..268957,269329..269400))
location: region:241087-269400:-1
so has part: feature:269329-269400:-1:exon
so has part: feature:268806-268957:-1:exon
so has part: feature:268630-268711:-1:exon
so has part: feature:243178-243399:-1:exon
so has part: feature:242862-243053:-1:exon
so has part: feature:242468-242627:-1:exon
so has part: feature:241894-242057:-1:exon
so has part: feature:241087-241290:-1:exon

XP_015194232.1
type: Protein
SIO_000068: ncbiprotein

position:241087:-1
position: 241087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269400:-1
position: 269400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269329-269400:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268806-268957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268630-268711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243178-243399:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242862-243053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:242468-242627:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241894-242057:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241087-241290:-1:exon

LOC102682207
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102682207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(276172..280374)
location: region:276172-280374:-1
so has part: feature:276172-280374:-1:exon
subclass of: SO_0000010

102682207
type: Gene
SIO_000068: ncbigene

position:276172:-1
position: 276172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280374:-1
position: 280374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276172-280374:-1:exon

LOC102682207
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102682207
product: RDS/peripherin-like protein xRDS35
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015338797.1
SIO_010081: LOC102682207
subclass of: SO_0000673
so part of: LOC102682207
location: complement(join(276172..277000,277598..277844,279313..280374))
location: region:276172-280374:-1
so has part: feature:279313-280374:-1:exon
so has part: feature:277598-277844:-1:exon
so has part: feature:276172-277000:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279313-280374:-1:exon

position:279313:-1
position: 279313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:277598-277844:-1:exon

position:277598:-1
position: 277598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277844:-1
position: 277844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:276172-277000:-1:exon

position:277000:-1
position: 277000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102682207
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102682207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RDS/peripherin-like protein xRDS35
translation: MVLMKVKFPFQRRVRLAQGLWLLSWLATMAGAFTFALGVFLKTELRRRSEVMDNAEIHAVPNTLMVVGLASLGINFFSGRICQDSLDAARFPRWKALLPPFFATALLFTLLMLVAVVMSYAMKGNLEESLKIGLKNGIRFYKDTDTPGRCFQKQTIDRLQMEFQCCGNSNFKDWFEVQWISNRYLDFSAKEVKDRVKSNVDGRYLVDGVPFSCCNPSSPRPCIQYRLTNNSAHYNYEFQTEDLNIFTRGCREALVNYYMGLMNTIGAGVLSVFLLQMSVLVSLRYLQTAMEGMVGKENTECDTEGYLLEKGVKETLKGFMDAFLKLFQTNQVTMDPEGGAPNEGAPKEGEKPATSGK
SIO_010081: LOC102682207
subclass of: SO_0000673
so part of: LOC102682207
location: complement(join(276755..277000,277598..277844,279313..279893))
location: region:276755-279893:-1
so has part: feature:279313-279893:-1:exon
so has part: feature:277598-277844:-1:exon
so has part: feature:276755-277000:-1:exon

XP_015194283.1
type: Protein
SIO_000068: ncbiprotein

position:276755:-1
position: 276755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279893:-1
position: 279893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279313-279893:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277598-277844:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276755-277000:-1:exon

ganab
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ganab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(282769..294433)
location: region:282769-294433:-1
so has part: feature:282769-294433:-1:exon
subclass of: SO_0000010

102682409
type: Gene
SIO_000068: ncbigene

position:282769:-1
position: 282769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294433:-1
position: 294433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282769-294433:-1:exon

ganab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ganab
product: glucosidase, alpha; neutral AB
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338747.1
SIO_010081: ganab
subclass of: SO_0000673
so part of: ganab
location: complement(join(282769..283198,283361..283461,283558..283670,283840..283953,284058..284169,286996..287107,287408..287534,287782..288118,289800..289875,289968..290073,290370..290442,291453..291701,293685..293812,293961..294069,294236..294433))
location: region:282769-294433:-1
so has part: feature:294236-294433:-1:exon
so has part: feature:293961-294069:-1:exon
so has part: feature:293685-293812:-1:exon
so has part: feature:291453-291701:-1:exon
so has part: feature:290370-290442:-1:exon
so has part: feature:289968-290073:-1:exon
so has part: feature:289800-289875:-1:exon
so has part: feature:287782-288118:-1:exon
so has part: feature:287408-287534:-1:exon
so has part: feature:286996-287107:-1:exon
so has part: feature:284058-284169:-1:exon
so has part: feature:283840-283953:-1:exon
so has part: feature:283558-283670:-1:exon
so has part: feature:283361-283461:-1:exon
so has part: feature:282769-283198:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294236-294433:-1:exon

position:294236:-1
position: 294236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:293961-294069:-1:exon

position:293961:-1
position: 293961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294069:-1
position: 294069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:293685-293812:-1:exon

position:293685:-1
position: 293685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293812:-1
position: 293812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:291453-291701:-1:exon

position:291453:-1
position: 291453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291701:-1
position: 291701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:290370-290442:-1:exon

position:290370:-1
position: 290370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290442:-1
position: 290442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:289968-290073:-1:exon

position:289968:-1
position: 289968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290073:-1
position: 290073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:289800-289875:-1:exon

position:289800:-1
position: 289800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289875:-1
position: 289875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:287782-288118:-1:exon

position:287782:-1
position: 287782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288118:-1
position: 288118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:287408-287534:-1:exon

position:287408:-1
position: 287408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287534:-1
position: 287534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:286996-287107:-1:exon

position:286996:-1
position: 286996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287107:-1
position: 287107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:284058-284169:-1:exon

position:284058:-1
position: 284058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284169:-1
position: 284169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:283840-283953:-1:exon

position:283840:-1
position: 283840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283953:-1
position: 283953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:283558-283670:-1:exon

position:283558:-1
position: 283558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283670:-1
position: 283670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:283361-283461:-1:exon

position:283361:-1
position: 283361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283461:-1
position: 283461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:282769-283198:-1:exon

position:283198:-1
position: 283198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ganab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ganab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neutral alpha-glucosidase AB
translation: MLRLCLAGLTLSALCLQQVQAVDRSNFKTCEQSSFCKRQRAVQPGQSPYRALLDTLQLSDSRLSLQLLNEHNKVKLLLELYGLQGNMTRIKINELKPLRPRFEVPDVLIRDPPAYPVHRALALMLPLRSGAPSCSMSGPRSGVGFPDASALSEAPRLKSHVVSLCFSPVCVRLRRPSLSHKISSTVGGLWDSLRSAFSSDARKEEEEEGAESQDAGAQPAGEKAADGEAETKQQQQQEEDQQGMWEETFKTHSDTKPHGPSSISLDFSLPGVEHVYGIPEHGDSWDRSWQRGGGGGARTPASVQQAHERRVSPPAPPGTQALPPLFALAYHQCRWNYNDQEDVAAVDAGFDEHDIPYDFIWLDIEHTDGKRYFTWDPNKFPAPKDMLQALQAKKRKMVAIVDPHIKVDSGYKIHNEIRSKGFYTKNKDGGDYEGWCWPGNAGYPDFTNPEMRSWWANMFAYDQYEVRTAPLLFPGGVTRLSLSPCLPQVWYDVHTFQKHSGGQHLYIPVTLSSIPVFQRGGSIVPRKNRVRRSSSCMTSDPYTLYVALSPEGEAEGELFVDDEHTFRFESEHQFIHRRFVFARGTLSSHNADPSGHFSSDSWVERVVILGASRPSVALLLIPDGSQSPLEFDFEERASVLTLRKPAVNVAADWTILLR
SIO_010081: ganab
subclass of: SO_0000673
so part of: ganab
location: complement(join(283089..283198,283361..283461,283558..283670,283840..283953,284058..284169,286996..287107,287408..287534,287782..288118,289800..289875,289968..290073,290370..290442,291453..291701,293685..293812,293961..294069,294236..294345))
location: region:283089-294345:-1
so has part: feature:294236-294345:-1:exon
so has part: feature:293961-294069:-1:exon
so has part: feature:293685-293812:-1:exon
so has part: feature:291453-291701:-1:exon
so has part: feature:290370-290442:-1:exon
so has part: feature:289968-290073:-1:exon
so has part: feature:289800-289875:-1:exon
so has part: feature:287782-288118:-1:exon
so has part: feature:287408-287534:-1:exon
so has part: feature:286996-287107:-1:exon
so has part: feature:284058-284169:-1:exon
so has part: feature:283840-283953:-1:exon
so has part: feature:283558-283670:-1:exon
so has part: feature:283361-283461:-1:exon
so has part: feature:283089-283198:-1:exon

XP_015194233.1
type: Protein
SIO_000068: ncbiprotein

position:283089:-1
position: 283089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294345:-1
position: 294345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294236-294345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293961-294069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293685-293812:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:291453-291701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:290370-290442:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:289968-290073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289800-289875:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287782-288118:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287408-287534:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286996-287107:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:284058-284169:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:283840-283953:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:283558-283670:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:283361-283461:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:283089-283198:-1:exon

LOC107075859
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075859
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 301342..302628
location: region:301342-302628:1
so has part: feature:301342-302628:1:exon
subclass of: SO_0000011

107075859
type: Gene
SIO_000068: ncbigene

position:301342:1
position: 301342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302628:1
position: 302628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301342-302628:1:exon

LOC107075859
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075859
product: uncharacterized LOC107075859
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_001477354.1
SIO_010081: LOC107075859
subclass of: SO_0000673
so part of: LOC107075859
location: join(301342..301416,301916..301954,302488..302628)
location: region:301342-302628:1
so has part: feature:301342-301416:1:exon
so has part: feature:301916-301954:1:exon
so has part: feature:302488-302628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:301342-301416:1:exon

position:301416:1
position: 301416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301916-301954:1:exon

position:301916:1
position: 301916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301954:1
position: 301954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:302488-302628:1:exon

position:302488:1
position: 302488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nudt22
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: nudt22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(312455..>313648)
location: region:312455-313648:-1
so has part: feature:312455-313648:-1:exon
subclass of: SO_0000010

107075845
type: Gene
SIO_000068: ncbigene

position:312455:-1
position: 312455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313648:-1
position: 313648
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312455-313648:-1:exon

nudt22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: nudt22
product: nudix hydrolase 22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015338748.1
SIO_010081: nudt22
subclass of: SO_0000673
so part of: nudt22
location: complement(join(312455..312571,312724..312831,313394..>313648))
location: region:312455-313648:-1
so has part: feature:313394-313648:-1:exon
so has part: feature:312724-312831:-1:exon
so has part: feature:312455-312571:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:313394-313648:-1:exon

position:313394:-1
position: 313394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:312724-312831:-1:exon

position:312724:-1
position: 312724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312831:-1
position: 312831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:312455-312571:-1:exon

position:312571:-1
position: 312571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nudt22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: nudt22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoside diphosphate-linked moiety X motif 22
translation: PALSLLLGLTCYRDFLGTNWSAEAQALRSRGAAELGDPLAFLAQPLGVGGVVVTADGLVVFLRRSLKVGEAPGLIDIPGGHPEPKTVAPEVSEDSITVEQLCGRRVVRELFSSVLTEIRDEVNVPLACLSEPVLLGIALNHTSAGRPSAEFYIRYCWTR
SIO_010081: nudt22
subclass of: SO_0000673
so part of: nudt22
location: complement(join(312455..312571,312724..312831,313394..>313648))
location: region:312455-313648:-1
so has part: feature:313394-313648:-1:exon
so has part: feature:312724-312831:-1:exon
so has part: feature:312455-312571:-1:exon

XP_015194234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313394-313648:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:312724-312831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312455-312571:-1:exon

vegfb
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: vegfb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 330896..333200
location: region:330896-333200:1
so has part: feature:330896-333200:1:exon
subclass of: SO_0000010

107075858
type: Gene
SIO_000068: ncbigene

position:330896:1
position: 330896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333200:1
position: 333200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330896-333200:1:exon

vegfb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: vegfb
product: vascular endothelial growth factor B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015338823.1
SIO_010081: vegfb
subclass of: SO_0000673
so part of: vegfb
location: join(330896..330995,332073..332105,332962..333200)
location: region:330896-333200:1
so has part: feature:330896-330995:1:exon
so has part: feature:332073-332105:1:exon
so has part: feature:332962-333200:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:330896-330995:1:exon

position:330995:1
position: 330995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:332073-332105:1:exon

position:332073:1
position: 332073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332105:1
position: 332105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:332962-333200:1:exon

position:332962:1
position: 332962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

vegfb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: vegfb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial growth factor B
translation: MKTTYMKHELVQMPFTEHSQCECRLKKAVHLVPLRQCQPCVGRRRVLDPGTCECRCSATARSCQLKGRTLNRHACR
SIO_010081: vegfb
subclass of: SO_0000673
so part of: vegfb
location: join(330925..330995,332073..332105,332962..333088)
location: region:330925-333088:1
so has part: feature:330925-330995:1:exon
so has part: feature:332073-332105:1:exon
so has part: feature:332962-333088:1:exon

XP_015194309.1
type: Protein
SIO_000068: ncbiprotein

position:330925:1
position: 330925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333088:1
position: 333088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330925-330995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:332073-332105:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:332962-333088:1:exon

stx5
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: stx5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 337825..345878
location: region:337825-345878:1
so has part: feature:337825-345878:1:exon
subclass of: SO_0000010

102693662
type: Gene
SIO_000068: ncbigene

position:337825:1
position: 337825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345878:1
position: 345878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337825-345878:1:exon

stx5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: stx5
product: syntaxin 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015338798.1
SIO_010081: stx5
subclass of: SO_0000673
so part of: stx5
location: join(337825..337910,338535..338633,339385..339598,339819..339889,340057..340112,340205..340275,340516..340632,341500..341556,341973..342054,342730..342830,342922..343043,343676..345878)
location: region:337825-345878:1
so has part: feature:337825-337910:1:exon
so has part: feature:338535-338633:1:exon
so has part: feature:339385-339598:1:exon
so has part: feature:339819-339889:1:exon
so has part: feature:340057-340112:1:exon
so has part: feature:340205-340275:1:exon
so has part: feature:340516-340632:1:exon
so has part: feature:341500-341556:1:exon
so has part: feature:341973-342054:1:exon
so has part: feature:342730-342830:1:exon
so has part: feature:342922-343043:1:exon
so has part: feature:343676-345878:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:337825-337910:1:exon

position:337910:1
position: 337910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:338535-338633:1:exon

position:338535:1
position: 338535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338633:1
position: 338633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:339385-339598:1:exon

position:339385:1
position: 339385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339598:1
position: 339598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:339819-339889:1:exon

position:339819:1
position: 339819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339889:1
position: 339889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:340057-340112:1:exon

position:340057:1
position: 340057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340112:1
position: 340112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:340205-340275:1:exon

position:340205:1
position: 340205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340275:1
position: 340275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:340516-340632:1:exon

position:340516:1
position: 340516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340632:1
position: 340632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:341500-341556:1:exon

position:341500:1
position: 341500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341556:1
position: 341556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:341973-342054:1:exon

position:341973:1
position: 341973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342054:1
position: 342054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:342730-342830:1:exon

position:342730:1
position: 342730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342830:1
position: 342830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:342922-343043:1:exon

position:342922:1
position: 342922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343043:1
position: 343043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:343676-345878:1:exon

position:343676:1
position: 343676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

stx5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: stx5
product: syntaxin 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006642757.2
SIO_010081: stx5
subclass of: SO_0000673
so part of: stx5
location: join(337825..337910,339385..339598,339819..339889,340057..340112,340205..340275,340516..340632,341500..341556,341973..342054,342730..342830,342922..343043,343676..345878)
location: region:337825-345878:1
so has part: feature:337825-337910:1:exon
so has part: feature:339385-339598:1:exon
so has part: feature:339819-339889:1:exon
so has part: feature:340057-340112:1:exon
so has part: feature:340205-340275:1:exon
so has part: feature:340516-340632:1:exon
so has part: feature:341500-341556:1:exon
so has part: feature:341973-342054:1:exon
so has part: feature:342730-342830:1:exon
so has part: feature:342922-343043:1:exon
so has part: feature:343676-345878:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:337825-337910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339385-339598:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:339819-339889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340057-340112:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340205-340275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:340516-340632:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:341500-341556:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:341973-342054:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342730-342830:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342922-343043:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:343676-345878:1:exon

stx5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: stx5
product: syntaxin 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015338799.1
SIO_010081: stx5
subclass of: SO_0000673
so part of: stx5
location: join(337852..337945,338535..338633,339385..339598,339819..339889,340057..340112,340205..340275,340516..340632,341500..341556,341973..342054,342730..342830,342922..343043,343676..345878)
location: region:337852-345878:1
so has part: feature:337852-337945:1:exon
so has part: feature:338535-338633:1:exon
so has part: feature:339385-339598:1:exon
so has part: feature:339819-339889:1:exon
so has part: feature:340057-340112:1:exon
so has part: feature:340205-340275:1:exon
so has part: feature:340516-340632:1:exon
so has part: feature:341500-341556:1:exon
so has part: feature:341973-342054:1:exon
so has part: feature:342730-342830:1:exon
so has part: feature:342922-343043:1:exon
so has part: feature:343676-345878:1:exon

position:337852:1
position: 337852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337852-337945:1:exon

position:337945:1
position: 337945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:338535-338633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:339385-339598:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339819-339889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340057-340112:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:340205-340275:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340516-340632:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:341500-341556:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341973-342054:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342730-342830:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342922-343043:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:343676-345878:1:exon

stx5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: stx5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-5
translation: MYTRRRHGSRSTEQGVYLGPSQTQAQDCPPPAGPPPLPVATDNAMSGRDRTQEFLSACKSLQGRQNGVQVHKPALSAVKQRSDFTIMAKRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDLVRSRGGQSGRHIQTHSNTIVVSLQSKLATMSNDFKSVLEVRTENLKQQRSRREHFSQAPVSSSPLHANNFGSSVLLRDDSPRSADVSIDMDARASQQLQLLDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDANVEDTQLNVEAAHGEILKYFQSVTSNRWLMVKIFLILIIFFVVFVVFLA
SIO_010081: stx5
subclass of: SO_0000673
so part of: stx5
location: join(339404..339598,339819..339889,340057..340112,340205..340275,340516..340632,341500..341556,341973..342054,342730..342830,342922..343043,343676..343835)
location: region:339404-343835:1
so has part: feature:339404-339598:1:exon
so has part: feature:339819-339889:1:exon
so has part: feature:340057-340112:1:exon
so has part: feature:340205-340275:1:exon
so has part: feature:340516-340632:1:exon
so has part: feature:341500-341556:1:exon
so has part: feature:341973-342054:1:exon
so has part: feature:342730-342830:1:exon
so has part: feature:342922-343043:1:exon
so has part: feature:343676-343835:1:exon

XP_006642820.1
type: Protein
SIO_000068: ncbiprotein

position:339404:1
position: 339404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343835:1
position: 343835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339404-339598:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339819-339889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340057-340112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340205-340275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340516-340632:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:341500-341556:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:341973-342054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342730-342830:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342922-343043:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:343676-343835:1:exon

stx5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: stx5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-5
translation: MYTRRRHGSRSTEQGVYLGPSQTQAQDCPPPAGPPPLPVATDNAMSGRDRTQEFLSACKSLQGRQNGVQVHKPALSAVKQRSDFTIMAKRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDLVRSRGGQSGRHIQTHSNTIVVSLQSKLATMSNDFKSVLEVRTENLKQQRSRREHFSQAPVSSSPLHANNFGSSVLLRDDSPRSADVSIDMDARASQQLQLLDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDANVEDTQLNVEAAHGEILKYFQSVTSNRWLMVKIFLILIIFFVVFVVFLA
SIO_010081: stx5
subclass of: SO_0000673
so part of: stx5
location: join(339404..339598,339819..339889,340057..340112,340205..340275,340516..340632,341500..341556,341973..342054,342730..342830,342922..343043,343676..343835)
location: region:339404-343835:1
so has part: feature:339404-339598:1:exon
so has part: feature:339819-339889:1:exon
so has part: feature:340057-340112:1:exon
so has part: feature:340205-340275:1:exon
so has part: feature:340516-340632:1:exon
so has part: feature:341500-341556:1:exon
so has part: feature:341973-342054:1:exon
so has part: feature:342730-342830:1:exon
so has part: feature:342922-343043:1:exon
so has part: feature:343676-343835:1:exon

XP_015194284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339404-339598:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339819-339889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340057-340112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340205-340275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340516-340632:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:341500-341556:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:341973-342054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342730-342830:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342922-343043:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:343676-343835:1:exon

stx5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: stx5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-5
translation: MYTRRRHGSRSTEQGVYLGPSQTQAQDCPPPAGPPPLPVATDNAMSGRDRTQEFLSACKSLQGRQNGVQVHKPALSAVKQRSDFTIMAKRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDLVRSRGGQSGRHIQTHSNTIVVSLQSKLATMSNDFKSVLEVRTENLKQQRSRREHFSQAPVSSSPLHANNFGSSVLLRDDSPRSADVSIDMDARASQQLQLLDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDANVEDTQLNVEAAHGEILKYFQSVTSNRWLMVKIFLILIIFFVVFVVFLA
SIO_010081: stx5
subclass of: SO_0000673
so part of: stx5
location: join(339404..339598,339819..339889,340057..340112,340205..340275,340516..340632,341500..341556,341973..342054,342730..342830,342922..343043,343676..343835)
location: region:339404-343835:1
so has part: feature:339404-339598:1:exon
so has part: feature:339819-339889:1:exon
so has part: feature:340057-340112:1:exon
so has part: feature:340205-340275:1:exon
so has part: feature:340516-340632:1:exon
so has part: feature:341500-341556:1:exon
so has part: feature:341973-342054:1:exon
so has part: feature:342730-342830:1:exon
so has part: feature:342922-343043:1:exon
so has part: feature:343676-343835:1:exon

XP_015194285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339404-339598:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339819-339889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340057-340112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340205-340275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340516-340632:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:341500-341556:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:341973-342054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342730-342830:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342922-343043:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:343676-343835:1:exon

LOC107075854
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075854
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(346727..347841)
location: region:346727-347841:-1
so has part: feature:346727-347841:-1:exon
subclass of: SO_0000010

107075854
type: Gene
SIO_000068: ncbigene

position:346727:-1
position: 346727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347841:-1
position: 347841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346727-347841:-1:exon

LOC107075854
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107075854
product: protein RD3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338819.1
SIO_010081: LOC107075854
subclass of: SO_0000673
so part of: LOC107075854
location: complement(346727..347841)
location: region:346727-347841:-1
so has part: feature:346727-347841:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:346727-347841:-1:exon

LOC107075854
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107075854
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein RD3-like
translation: MTLPGPLPTLPRVRKLVTEFEPDVHEVSRIFRSVLRDSLEEEEEREERRLQSRWEKRRSKSLSLVSFKSRLRVNPFRGAGSALPEDELWRGEEEAGLGLARRVRSMPEITPLEERAAQS
SIO_010081: LOC107075854
subclass of: SO_0000673
so part of: LOC107075854
location: complement(347358..347717)
location: region:347358-347717:-1
so has part: feature:347358-347717:-1:exon

XP_015194305.1
type: Protein
SIO_000068: ncbiprotein

position:347358:-1
position: 347358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347717:-1
position: 347717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347358-347717:-1:exon

LOC102682814
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102682814
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(402532..408903)
location: region:402532-408903:-1
so has part: feature:402532-408903:-1:exon
subclass of: SO_0000010

102682814
type: Gene
SIO_000068: ncbigene

position:402532:-1
position: 402532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408903:-1
position: 408903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402532-408903:-1:exon

LOC102682814
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102682814
product: transforming growth factor beta-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338749.1
SIO_010081: LOC102682814
subclass of: SO_0000673
so part of: LOC102682814
location: complement(join(402532..404329,405097..405250,405338..406160,407937..408903))
location: region:402532-408903:-1
so has part: feature:407937-408903:-1:exon
so has part: feature:405338-406160:-1:exon
so has part: feature:405097-405250:-1:exon
so has part: feature:402532-404329:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:407937-408903:-1:exon

position:407937:-1
position: 407937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:405338-406160:-1:exon

position:405338:-1
position: 405338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406160:-1
position: 406160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:405097-405250:-1:exon

position:405097:-1
position: 405097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405250:-1
position: 405250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:402532-404329:-1:exon

position:404329:-1
position: 404329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102682814
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102682814
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transforming growth factor beta-2-like
translation: MAPLSLWLAAHLALLLDLAGPAGGFSTCQGLDLKEYRDKRIRAVRGQILSKLRIAEPPEAALAPPAPEVAPEVMLLYNSTRELVREHARLAESACERESSEEDYYAKEVQRVDMLPPSHGHWYLYLSVTGQSSGICTSLSLGRALVSVPLCPSATGQGRCICTSLSLGRALVSVPLCHWAELWYLYLSVHLPLVSLPLCLWAGHWYLSFCHWAGHWYLYLSVHLPLGRALVSVPHCHWAEHWYLYLSVHLPLGRALVSVPLCHWAELWYLYLSVHLPLGRALVSVPLCHWAELWYLYLSVTGQSSGICTSLSLGRALVSVPLCPSVSLTFLSLSGLDDQLIKQYKKSGSKGSKFDISTKTPHLILTLLPTDRLESPAKKGRERRAAGDTPTCSRNADQSCCLHSLYIDFRRDLNWRWIHEPKGYKANFCAGSCPYLWSADMHYSRILPLYNKLNPEASVSPCCVPQELEPLTIIYFVGRNPRVEQLSNMVVKSCKCR
SIO_010081: LOC102682814
subclass of: SO_0000673
so part of: LOC102682814
location: complement(join(404171..404329,405097..405250,405338..406160,407937..408294))
location: region:404171-408294:-1
so has part: feature:407937-408294:-1:exon
so has part: feature:405338-406160:-1:exon
so has part: feature:405097-405250:-1:exon
so has part: feature:404171-404329:-1:exon

XP_015194235.1
type: Protein
SIO_000068: ncbiprotein

position:404171:-1
position: 404171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408294:-1
position: 408294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407937-408294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405338-406160:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405097-405250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404171-404329:-1:exon

trmt112
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: trmt112
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<431995..433490)
location: region:431995-433490:-1
so has part: feature:431995-433490:-1:exon
subclass of: SO_0000010

102683013
type: Gene
SIO_000068: ncbigene

position:431995:-1
position: 431995
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:433490:-1
position: 433490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431995-433490:-1:exon

trmt112
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: trmt112
product: tRNA methyltransferase 11-2 homolog (S. cerevisiae)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015338750.1
SIO_010081: trmt112
subclass of: SO_0000673
so part of: trmt112
location: complement(join(<431995..432111,432190..432291,433171..433490))
location: region:431995-433490:-1
so has part: feature:433171-433490:-1:exon
so has part: feature:432190-432291:-1:exon
so has part: feature:431995-432111:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:433171-433490:-1:exon

position:433171:-1
position: 433171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:432190-432291:-1:exon

position:432190:-1
position: 432190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432291:-1
position: 432291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:431995-432111:-1:exon

position:432111:-1
position: 432111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

trmt112
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: trmt112
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multifunctional methyltransferase subunit TRM112-like protein
translation: MKLITHNMLTSHVKGVTKGYPLLIKATEVQVSEVEFNPEFLSRMIPKLEWGVLVQAADSLGHLNDLPNELAPEHEKDEEFLRRVHRVLLEVSWYCAHS
SIO_010081: trmt112
subclass of: SO_0000673
so part of: trmt112
location: complement(join(<431995..432111,432190..432291,433171..433245))
location: region:431995-433245:-1
so has part: feature:433171-433245:-1:exon
so has part: feature:432190-432291:-1:exon
so has part: feature:431995-432111:-1:exon

XP_015194236.1
type: Protein
SIO_000068: ncbiprotein

position:433245:-1
position: 433245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433171-433245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:432190-432291:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:431995-432111:-1:exon

LOC107075865
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 433510..436505
location: region:433510-436505:1
so has part: feature:433510-436505:1:exon
subclass of: SO_0000011

107075865
type: Gene
SIO_000068: ncbigene

position:433510:1
position: 433510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436505:1
position: 436505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433510-436505:1:exon

LOC107075865
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075865
product: uncharacterized LOC107075865
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_001477360.1
SIO_010081: LOC107075865
subclass of: SO_0000673
so part of: LOC107075865
location: join(433510..433606,434779..434894,436279..436505)
location: region:433510-436505:1
so has part: feature:433510-433606:1:exon
so has part: feature:434779-434894:1:exon
so has part: feature:436279-436505:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:433510-433606:1:exon

position:433606:1
position: 433606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:434779-434894:1:exon

position:434779:1
position: 434779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434894:1
position: 434894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:436279-436505:1:exon

position:436279:1
position: 436279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

atg2a
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: atg2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(441765..465127)
location: region:441765-465127:-1
so has part: feature:441765-465127:-1:exon
subclass of: SO_0000010

102683217
type: Gene
SIO_000068: ncbigene

position:441765:-1
position: 441765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465127:-1
position: 465127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441765-465127:-1:exon

atg2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: atg2a
product: autophagy related 2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338751.1
SIO_010081: atg2a
subclass of: SO_0000673
so part of: atg2a
location: complement(join(441765..442193,443044..443273,450485..450689,450799..450969,451090..451166,451260..451330,452023..452115,452371..452477,452564..452644,452748..452932,453050..453200,453273..453427,453510..453568,455185..455327,455423..455588,455676..455805,457179..457290,457801..457947,458592..458690,459496..459646,459914..460169,460252..460327,460461..460585,461460..461627,461758..461857,461992..462147,462280..462418,462518..462620,462742..462891,463452..463614,464651..465127))
location: region:441765-465127:-1
so has part: feature:464651-465127:-1:exon
so has part: feature:463452-463614:-1:exon
so has part: feature:462742-462891:-1:exon
so has part: feature:462518-462620:-1:exon
so has part: feature:462280-462418:-1:exon
so has part: feature:461992-462147:-1:exon
so has part: feature:461758-461857:-1:exon
so has part: feature:461460-461627:-1:exon
so has part: feature:460461-460585:-1:exon
so has part: feature:460252-460327:-1:exon
so has part: feature:459914-460169:-1:exon
so has part: feature:459496-459646:-1:exon
so has part: feature:458592-458690:-1:exon
so has part: feature:457801-457947:-1:exon
so has part: feature:457179-457290:-1:exon
so has part: feature:455676-455805:-1:exon
so has part: feature:455423-455588:-1:exon
so has part: feature:455185-455327:-1:exon
so has part: feature:453510-453568:-1:exon
so has part: feature:453273-453427:-1:exon
so has part: feature:453050-453200:-1:exon
so has part: feature:452748-452932:-1:exon
so has part: feature:452564-452644:-1:exon
so has part: feature:452371-452477:-1:exon
so has part: feature:452023-452115:-1:exon
so has part: feature:451260-451330:-1:exon
so has part: feature:451090-451166:-1:exon
so has part: feature:450799-450969:-1:exon
so has part: feature:450485-450689:-1:exon
so has part: feature:443044-443273:-1:exon
so has part: feature:441765-442193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464651-465127:-1:exon

position:464651:-1
position: 464651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:463452-463614:-1:exon

position:463452:-1
position: 463452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463614:-1
position: 463614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:462742-462891:-1:exon

position:462742:-1
position: 462742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462891:-1
position: 462891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:462518-462620:-1:exon

position:462518:-1
position: 462518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462620:-1
position: 462620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:462280-462418:-1:exon

position:462280:-1
position: 462280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462418:-1
position: 462418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:461992-462147:-1:exon

position:461992:-1
position: 461992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462147:-1
position: 462147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:461758-461857:-1:exon

position:461758:-1
position: 461758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461857:-1
position: 461857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:461460-461627:-1:exon

position:461460:-1
position: 461460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461627:-1
position: 461627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:460461-460585:-1:exon

position:460461:-1
position: 460461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460585:-1
position: 460585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:460252-460327:-1:exon

position:460252:-1
position: 460252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460327:-1
position: 460327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:459914-460169:-1:exon

position:459914:-1
position: 459914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460169:-1
position: 460169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:459496-459646:-1:exon

position:459496:-1
position: 459496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459646:-1
position: 459646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:458592-458690:-1:exon

position:458592:-1
position: 458592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458690:-1
position: 458690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:457801-457947:-1:exon

position:457801:-1
position: 457801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457947:-1
position: 457947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:457179-457290:-1:exon

position:457179:-1
position: 457179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457290:-1
position: 457290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:455676-455805:-1:exon

position:455676:-1
position: 455676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455805:-1
position: 455805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:455423-455588:-1:exon

position:455423:-1
position: 455423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455588:-1
position: 455588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:455185-455327:-1:exon

position:455185:-1
position: 455185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455327:-1
position: 455327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:453510-453568:-1:exon

position:453510:-1
position: 453510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453568:-1
position: 453568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:453273-453427:-1:exon

position:453273:-1
position: 453273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453427:-1
position: 453427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:453050-453200:-1:exon

position:453050:-1
position: 453050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453200:-1
position: 453200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:452748-452932:-1:exon

position:452748:-1
position: 452748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452932:-1
position: 452932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:452564-452644:-1:exon

position:452564:-1
position: 452564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452644:-1
position: 452644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:452371-452477:-1:exon

position:452371:-1
position: 452371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452477:-1
position: 452477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:452023-452115:-1:exon

position:452023:-1
position: 452023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452115:-1
position: 452115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:451260-451330:-1:exon

position:451260:-1
position: 451260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451330:-1
position: 451330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:451090-451166:-1:exon

position:451090:-1
position: 451090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451166:-1
position: 451166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:450799-450969:-1:exon

position:450799:-1
position: 450799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450969:-1
position: 450969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:450485-450689:-1:exon

position:450485:-1
position: 450485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450689:-1
position: 450689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:443044-443273:-1:exon

position:443044:-1
position: 443044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443273:-1
position: 443273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:441765-442193:-1:exon

position:442193:-1
position: 442193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

atg2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: atg2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy-related protein 2 homolog A
translation: MSRWLLPWSGSLKKRACRYLLQHYLGHFLQERLTLDQLSLDLYNGSGVIRDISLDVWSVNELLESVGAPLELVDGFVSSIAVTIPWAALVTDHCTVEIQGLQLTCRPKYRTSTTWDSQGWSSCMTSSMQLAQECLKDPPEASEEPPAPLEGLEMFAQTIETVLRRIRVTFLDTIVRVEHQPLDSDTGVALEVHIKRLDYCDEAVRDSSQALPVDIHQPPAVLHKILQLSAVQLLYEATGGSQAEVPPGSDSEGDSLATGDRESGPQRPQLIGMCSGVMETSVKIKQNSALPGPKLELEGKMGCVHLLLSPGQIAHLSDLLSVLCVETEPSRGADGGRSRPLGSEDLRLIEEDLGRQLSAETADRGQTSEEEEEQSFLGSLDNTEMFYSMGVGMSSSLASLRSASELSDSGMDSSAHSQLSALAAGLMVTSPRRYPVPGALSSLQAGPRLSGRLSQRPPAEPLKTDALLRLSLGGLTLTLLEQEPSPAGQQGEPSPGEVSRVFFQELGFFKDAVFSGRDFTPLRESFAKACPHSHLRLTGSAVQVTCEWKSSGRRAREMTSDLSFSRLELLECLRGPESPGEPQYTEVLLFQNPSAFTFGQTAKPCAQIHYRLSESTSRRGAVRQRLVRSDSTVRVELGEFTAELDLDLLTRLDLIFRALSAEAQSHAQRDQPQCSELHSSVTLLSPLAVLRLRFPVPDLRPGPERPSDLTLPAPRLSGVYEDGEGGSFPCIRVQKASDPQGSGQDGIPSVVVRLSSPEPSSGPWEAGVEHSLEGDLGSVESPCELRQRESSPFSSNRTMFETEEMVIPADQEEMLAFQSQCVSQSQYVLEVTLPLATVLLPSKEAYQSLYNRCQAVLVSVICAGLGDLCSSYSDSEEEEPQFISAEETLRHRGAELQLGPTHSLLSLTIHIGRGRLTCMADSKGESGQKVEQCHGELVLDVEGGKIFSVTQHRGDPFLNFLCLESQKVELYHHAIVPDSPLPERLEMPSFTPPDHLEPTIYPSEAGVSSVAGRESRRQMLSTAIKITLDPARGVKEFLVALGLQGATLRHRMSSSYQSWHEQLVDFLDVIDEPILGYTPPAVITVLHTHLLSCAVDYRPLYLPVRMLFTAESFSLSSNIIVDTATFHLRFILDDSALYLSDRCDSDTVDLRRDYVCVLDIDLLELAITTWRASEDSKLTQPLFELRCSNNVVHLHTCADSCATLVNLLQYLVSHGDLHPPPQPHPPTEIAGQRLPLSESPASLPPCLPAETAEINQCDLTDALIDTEKSQQDEEAGAGEGKERRGSGLSVLIAACCVCVRACVPRLSRAPPSTVPPTQPAPAERQACPSPQATAETVYDILSPAPPLCRALSDRRHAHRRPAQPADLREGVAKAYDTVREGVIDTAQTICVMASRGHEQKGLPGAVGGVLRQIPPTVVRPLIVATEATSNLLGGMRNQIKPDARKEDFLKWRTEDSQE
SIO_010081: atg2a
subclass of: SO_0000673
so part of: atg2a
location: complement(join(441957..442193,443044..443273,450485..450689,450799..450969,451090..451166,451260..451330,452023..452115,452371..452477,452564..452644,452748..452932,453050..453200,453273..453427,453510..453568,455185..455327,455423..455588,455676..455805,457179..457290,457801..457947,458592..458690,459496..459646,459914..460169,460252..460327,460461..460585,461460..461627,461758..461857,461992..462147,462280..462418,462518..462620,462742..462891,463452..463614,464651..464821))
location: region:441957-464821:-1
so has part: feature:464651-464821:-1:exon
so has part: feature:463452-463614:-1:exon
so has part: feature:462742-462891:-1:exon
so has part: feature:462518-462620:-1:exon
so has part: feature:462280-462418:-1:exon
so has part: feature:461992-462147:-1:exon
so has part: feature:461758-461857:-1:exon
so has part: feature:461460-461627:-1:exon
so has part: feature:460461-460585:-1:exon
so has part: feature:460252-460327:-1:exon
so has part: feature:459914-460169:-1:exon
so has part: feature:459496-459646:-1:exon
so has part: feature:458592-458690:-1:exon
so has part: feature:457801-457947:-1:exon
so has part: feature:457179-457290:-1:exon
so has part: feature:455676-455805:-1:exon
so has part: feature:455423-455588:-1:exon
so has part: feature:455185-455327:-1:exon
so has part: feature:453510-453568:-1:exon
so has part: feature:453273-453427:-1:exon
so has part: feature:453050-453200:-1:exon
so has part: feature:452748-452932:-1:exon
so has part: feature:452564-452644:-1:exon
so has part: feature:452371-452477:-1:exon
so has part: feature:452023-452115:-1:exon
so has part: feature:451260-451330:-1:exon
so has part: feature:451090-451166:-1:exon
so has part: feature:450799-450969:-1:exon
so has part: feature:450485-450689:-1:exon
so has part: feature:443044-443273:-1:exon
so has part: feature:441957-442193:-1:exon

XP_015194237.1
type: Protein
SIO_000068: ncbiprotein

position:441957:-1
position: 441957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464821:-1
position: 464821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464651-464821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463452-463614:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:462742-462891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:462518-462620:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462280-462418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461992-462147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:461758-461857:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:461460-461627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:460461-460585:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:460252-460327:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:459914-460169:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:459496-459646:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:458592-458690:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:457801-457947:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:457179-457290:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:455676-455805:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:455423-455588:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:455185-455327:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:453510-453568:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453273-453427:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:453050-453200:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:452748-452932:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:452564-452644:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:452371-452477:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:452023-452115:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:451260-451330:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:451090-451166:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:450799-450969:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:450485-450689:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:443044-443273:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:441957-442193:-1:exon

nxf1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: nxf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(466761..484233)
location: region:466761-484233:-1
so has part: feature:466761-484233:-1:exon
subclass of: SO_0000010

102683418
type: Gene
SIO_000068: ncbigene

position:466761:-1
position: 466761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484233:-1
position: 484233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466761-484233:-1:exon

nxf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: nxf1
product: nuclear RNA export factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338752.1
SIO_010081: nxf1
subclass of: SO_0000673
so part of: nxf1
location: complement(join(466761..467128,469354..469414,469497..469679,469773..469845,470352..470394,470509..470624,471097..471155,471695..471802,471991..472016,477346..477666,477794..477901,478266..478354,478448..478517,479257..479337,479422..479526,479883..480030,483694..483850,484206..484233))
location: region:466761-484233:-1
so has part: feature:484206-484233:-1:exon
so has part: feature:483694-483850:-1:exon
so has part: feature:479883-480030:-1:exon
so has part: feature:479422-479526:-1:exon
so has part: feature:479257-479337:-1:exon
so has part: feature:478448-478517:-1:exon
so has part: feature:478266-478354:-1:exon
so has part: feature:477794-477901:-1:exon
so has part: feature:477346-477666:-1:exon
so has part: feature:471991-472016:-1:exon
so has part: feature:471695-471802:-1:exon
so has part: feature:471097-471155:-1:exon
so has part: feature:470509-470624:-1:exon
so has part: feature:470352-470394:-1:exon
so has part: feature:469773-469845:-1:exon
so has part: feature:469497-469679:-1:exon
so has part: feature:469354-469414:-1:exon
so has part: feature:466761-467128:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:484206-484233:-1:exon

position:484206:-1
position: 484206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:483694-483850:-1:exon

position:483694:-1
position: 483694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483850:-1
position: 483850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:479883-480030:-1:exon

position:479883:-1
position: 479883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480030:-1
position: 480030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:479422-479526:-1:exon

position:479422:-1
position: 479422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479526:-1
position: 479526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:479257-479337:-1:exon

position:479257:-1
position: 479257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479337:-1
position: 479337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:478448-478517:-1:exon

position:478448:-1
position: 478448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478517:-1
position: 478517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:478266-478354:-1:exon

position:478266:-1
position: 478266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478354:-1
position: 478354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:477794-477901:-1:exon

position:477794:-1
position: 477794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477901:-1
position: 477901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:477346-477666:-1:exon

position:477346:-1
position: 477346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477666:-1
position: 477666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:471991-472016:-1:exon

position:471991:-1
position: 471991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472016:-1
position: 472016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:471695-471802:-1:exon

position:471695:-1
position: 471695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471802:-1
position: 471802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:471097-471155:-1:exon

position:471097:-1
position: 471097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471155:-1
position: 471155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:470509-470624:-1:exon

position:470509:-1
position: 470509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470624:-1
position: 470624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:470352-470394:-1:exon

position:470352:-1
position: 470352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470394:-1
position: 470394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:469773-469845:-1:exon

position:469773:-1
position: 469773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469845:-1
position: 469845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:469497-469679:-1:exon

position:469497:-1
position: 469497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469679:-1
position: 469679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:469354-469414:-1:exon

position:469354:-1
position: 469354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469414:-1
position: 469414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:466761-467128:-1:exon

position:467128:-1
position: 467128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nxf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: nxf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear RNA export factor 1
translation: MADEGRYYSAARWSHGPPVAQNSGQAEVSPQPLRSCALPRGPQAPGSGSLPTPLTLAVLSFQAQSLTGGHRGQSFRSFCLLLQIPYGKKYDKTWLITALQNLCTVPFTPVQYHCEGNKAMFYIEDATTANALSKVSRKITDTDGYKVSVIMNPSPPPPSIQSELKPEDLEHMKQCMSKRFDAPQQALDLNSIRTDPDLLSHNIEVILNRKNCMQAVNKIIEENIPELVSLNLSNNRLYKLDDMAELVGRVPTLKILNLSHNELKTERELDKIKGFKLEELWLDRNPLCNHFKDQSTYIRSVRRRAGAAGRGGGGVGFVQGGTSWPELVLFCAHWPTDTPTWGERGRRGGQATGWSGPTGRVLGSHGALLCLILHFLQQYYSVYDTADRQPLLDAYHDGASFSISIPNSSQNPSRSSLGDYLKDSRNIKRLKDPTMRFRLLKHTRLNVVAFLNELPKTQHDINCFVVDVNTYTNTLLSFTVSGVFKEVDGKSRDSVRAFSRAFIAVPAGNAGLCIVNDQLFVRNATTEEIRKAFATPAPTPSSSPVPTLSAAQQEMLNAFSLQSGMNLEWSQKCLQDNEWDFSRAAHIFTQLKAQDKIPPAAFMK
SIO_010081: nxf1
subclass of: SO_0000673
so part of: nxf1
location: complement(join(467090..467128,469354..469414,469497..469679,469773..469845,470352..470394,470509..470624,471097..471155,471695..471802,471991..472016,477346..477666,477794..477901,478266..478354,478448..478517,479257..479337,479422..479526,479883..480030,483694..483850,484206..484233))
location: region:467090-484233:-1
so has part: feature:484206-484233:-1:exon
so has part: feature:483694-483850:-1:exon
so has part: feature:479883-480030:-1:exon
so has part: feature:479422-479526:-1:exon
so has part: feature:479257-479337:-1:exon
so has part: feature:478448-478517:-1:exon
so has part: feature:478266-478354:-1:exon
so has part: feature:477794-477901:-1:exon
so has part: feature:477346-477666:-1:exon
so has part: feature:471991-472016:-1:exon
so has part: feature:471695-471802:-1:exon
so has part: feature:471097-471155:-1:exon
so has part: feature:470509-470624:-1:exon
so has part: feature:470352-470394:-1:exon
so has part: feature:469773-469845:-1:exon
so has part: feature:469497-469679:-1:exon
so has part: feature:469354-469414:-1:exon
so has part: feature:467090-467128:-1:exon

XP_015194238.1
type: Protein
SIO_000068: ncbiprotein

position:467090:-1
position: 467090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484206-484233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:483694-483850:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479883-480030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479422-479526:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479257-479337:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478448-478517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478266-478354:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477794-477901:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:477346-477666:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:471991-472016:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:471695-471802:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:471097-471155:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:470509-470624:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:470352-470394:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:469773-469845:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:469497-469679:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:469354-469414:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:467090-467128:-1:exon

LOC107075857
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(491358..492103)
location: region:491358-492103:-1
so has part: feature:491358-492103:-1:exon
subclass of: SO_0000010

107075857
type: Gene
SIO_000068: ncbigene

position:491358:-1
position: 491358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492103:-1
position: 492103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491358-492103:-1:exon

LOC107075857
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107075857
product: inositol-trisphosphate 3-kinase A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_015338822.1
SIO_010081: LOC107075857
subclass of: SO_0000673
so part of: LOC107075857
location: complement(join(491358..491758,491946..492103))
location: region:491358-492103:-1
so has part: feature:491946-492103:-1:exon
so has part: feature:491358-491758:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:491946-492103:-1:exon

position:491946:-1
position: 491946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:491358-491758:-1:exon

position:491758:-1
position: 491758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107075857
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107075857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol-trisphosphate 3-kinase A-like
translation: MSDVLRPFVPQYRGPTTRGGQTYLRLEDLLSGLDSPVIMDCKMGVSSCPSETALPVDTVIHCHWISPERLHILGAGVSVDK
SIO_010081: LOC107075857
subclass of: SO_0000673
so part of: LOC107075857
location: complement(join(491650..491758,491946..492082))
location: region:491650-492082:-1
so has part: feature:491946-492082:-1:exon
so has part: feature:491650-491758:-1:exon

XP_015194308.1
type: Protein
SIO_000068: ncbiprotein

position:491650:-1
position: 491650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492082:-1
position: 492082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491946-492082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:491650-491758:-1:exon

bscl2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: bscl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(500142..507455)
location: region:500142-507455:-1
so has part: feature:500142-507455:-1:exon
subclass of: SO_0000010

102683626
type: Gene
SIO_000068: ncbigene

position:500142:-1
position: 500142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507455:-1
position: 507455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500142-507455:-1:exon

bscl2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: bscl2
product: Berardinelli-Seip congenital lipodystrophy 2 (seipin)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338754.1
SIO_010081: bscl2
subclass of: SO_0000673
so part of: bscl2
location: complement(join(500142..500290,500750..500833,500908..501003,501682..501760,501850..501991,502093..502190,502411..502600,504204..504431,504607..504708,505646..505947,507380..507455))
location: region:500142-507455:-1
so has part: feature:507380-507455:-1:exon
so has part: feature:505646-505947:-1:exon
so has part: feature:504607-504708:-1:exon
so has part: feature:504204-504431:-1:exon
so has part: feature:502411-502600:-1:exon
so has part: feature:502093-502190:-1:exon
so has part: feature:501850-501991:-1:exon
so has part: feature:501682-501760:-1:exon
so has part: feature:500908-501003:-1:exon
so has part: feature:500750-500833:-1:exon
so has part: feature:500142-500290:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:507380-507455:-1:exon

position:507380:-1
position: 507380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:505646-505947:-1:exon

position:505646:-1
position: 505646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505947:-1
position: 505947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:504607-504708:-1:exon

position:504607:-1
position: 504607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504708:-1
position: 504708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:504204-504431:-1:exon

position:504204:-1
position: 504204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504431:-1
position: 504431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:502411-502600:-1:exon

position:502411:-1
position: 502411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502600:-1
position: 502600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:502093-502190:-1:exon

position:502093:-1
position: 502093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502190:-1
position: 502190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:501850-501991:-1:exon

position:501850:-1
position: 501850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501991:-1
position: 501991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:501682-501760:-1:exon

position:501682:-1
position: 501682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501760:-1
position: 501760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:500908-501003:-1:exon

position:500908:-1
position: 500908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501003:-1
position: 501003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:500750-500833:-1:exon

position:500750:-1
position: 500750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500833:-1
position: 500833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:500142-500290:-1:exon

position:500290:-1
position: 500290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

bscl2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: bscl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: seipin
translation: MGAGAAPALQWLQEWAAVSVLRARRTLLQAAVLLCVLVLLLWVAIFLYGSFYYSYMPTVSFATPVHYVYSCVIAVLPSCRLSPPVSQQAMLHYRSSLLETLATLFFSPLLLSGMAEQKQLLEVELYSDYRENSYVPTVGALLEIQTRRIQIYSAQLRIHAHFTGIRYLLYNFPVTSAVIGVASNFAFLSVIVLFSYLQFIWGGLWPRDQIRVQVSMGDQVRLQQRREEVRRRMRAPSAQTQVTHAAGGASAGADTGAGPSGLTGSEPARTKDELDAVREEALETIGSLSGHPDLQQHYSGETE
SIO_010081: bscl2
subclass of: SO_0000673
so part of: bscl2
location: complement(join(500277..500290,500750..500833,500908..501003,501682..501760,501850..501991,502093..502190,502411..502600,504204..504412))
location: region:500277-504412:-1
so has part: feature:504204-504412:-1:exon
so has part: feature:502411-502600:-1:exon
so has part: feature:502093-502190:-1:exon
so has part: feature:501850-501991:-1:exon
so has part: feature:501682-501760:-1:exon
so has part: feature:500908-501003:-1:exon
so has part: feature:500750-500833:-1:exon
so has part: feature:500277-500290:-1:exon

XP_015194240.1
type: Protein
SIO_000068: ncbiprotein

position:500277:-1
position: 500277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504412:-1
position: 504412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504204-504412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502411-502600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:502093-502190:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501850-501991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:501682-501760:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:500908-501003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:500750-500833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:500277-500290:-1:exon

gng3
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: gng3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 508247..511572
location: region:508247-511572:1
so has part: feature:508247-511572:1:exon
subclass of: SO_0000010

102693860
type: Gene
SIO_000068: ncbigene

position:508247:1
position: 508247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511572:1
position: 511572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508247-511572:1:exon

gng3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: gng3
product: guanine nucleotide binding protein (G protein), gamma 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_006642758.2
SIO_010081: gng3
subclass of: SO_0000673
so part of: gng3
location: join(508247..508430,509758..509857,510320..510444,511298..511572)
location: region:508247-511572:1
so has part: feature:508247-508430:1:exon
so has part: feature:509758-509857:1:exon
so has part: feature:510320-510444:1:exon
so has part: feature:511298-511572:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:508247-508430:1:exon

position:508430:1
position: 508430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:509758-509857:1:exon

position:509758:1
position: 509758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509857:1
position: 509857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:510320-510444:1:exon

position:510320:1
position: 510320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510444:1
position: 510444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:511298-511572:1:exon

position:511298:1
position: 511298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gng3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: gng3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-3
translation: MKGDTPLNSTMSIGQARKLVEQLKIEASMCRIKVSKAAADLMAYCDAHACEDPLITPVPTSENPFREKKFFCALLPCRSDPASRLPAAACLCAPAAPARV
SIO_010081: gng3
subclass of: SO_0000673
so part of: gng3
location: join(509759..509857,510320..510444,511298..511376)
location: region:509759-511376:1
so has part: feature:509759-509857:1:exon
so has part: feature:510320-510444:1:exon
so has part: feature:511298-511376:1:exon

XP_006642821.2
type: Protein
SIO_000068: ncbiprotein

position:509759:1
position: 509759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511376:1
position: 511376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509759-509857:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510320-510444:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:511298-511376:1:exon

LOC102684038
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102684038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(513232..519865)
location: region:513232-519865:-1
so has part: feature:513232-519865:-1:exon
subclass of: SO_0000010

102684038
type: Gene
SIO_000068: ncbigene

position:513232:-1
position: 513232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519865:-1
position: 519865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513232-519865:-1:exon

LOC102684038
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102684038
product: adenylosuccinate synthetase isozyme 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338755.1
SIO_010081: LOC102684038
subclass of: SO_0000673
so part of: LOC102684038
location: complement(join(513232..513302,513647..513796,513924..514021,514164..514359,519096..519222,519616..519865))
location: region:513232-519865:-1
so has part: feature:519616-519865:-1:exon
so has part: feature:519096-519222:-1:exon
so has part: feature:514164-514359:-1:exon
so has part: feature:513924-514021:-1:exon
so has part: feature:513647-513796:-1:exon
so has part: feature:513232-513302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:519616-519865:-1:exon

position:519616:-1
position: 519616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:519096-519222:-1:exon

position:519096:-1
position: 519096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519222:-1
position: 519222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:514164-514359:-1:exon

position:514164:-1
position: 514164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514359:-1
position: 514359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:513924-514021:-1:exon

position:513924:-1
position: 513924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514021:-1
position: 514021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:513647-513796:-1:exon

position:513647:-1
position: 513647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513796:-1
position: 513796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:513232-513302:-1:exon

position:513302:-1
position: 513302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102684038
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102684038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylosuccinate synthetase isozyme 2-like
translation: MAADGVVTNGREQASLNGEPDAKRARVPAEPRNQVTVVLGAQWGDEGKGKVVDLLAMDADIVCRCQGGNNAGHTVVVDGVEYDFHLLPSGVLNRNAISFIGGSRHELSLSVCVCSWLCGPVLTRLPVVVPLQEIGALLQARGREFGVTTGRPRRCGWLDLVLVQYAHMINGFTALALTKLDILDTLKEIKVGVAYTVNGQTIPSFPANLDTLSQVSVQYETLPGWECSTEGVRSFGDLPPKAQAYVRFVENYLQVPVKWIGVGKSRESMIKLF
SIO_010081: LOC102684038
subclass of: SO_0000673
so part of: LOC102684038
location: complement(join(513250..513302,513647..513796,513924..514021,514164..514359,519096..519222,519616..519813))
location: region:513250-519813:-1
so has part: feature:519616-519813:-1:exon
so has part: feature:519096-519222:-1:exon
so has part: feature:514164-514359:-1:exon
so has part: feature:513924-514021:-1:exon
so has part: feature:513647-513796:-1:exon
so has part: feature:513250-513302:-1:exon

XP_015194241.1
type: Protein
SIO_000068: ncbiprotein

position:513250:-1
position: 513250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519813:-1
position: 519813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519616-519813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519096-519222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:514164-514359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513924-514021:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:513647-513796:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:513250-513302:-1:exon

LOC107075864
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075864
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(521338..522364)
location: region:521338-522364:-1
so has part: feature:521338-522364:-1:exon
subclass of: SO_0000011

107075864
type: Gene
SIO_000068: ncbigene

position:521338:-1
position: 521338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522364:-1
position: 522364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521338-522364:-1:exon

LOC107075864
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075864
product: uncharacterized LOC107075864
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_001477359.1
SIO_010081: LOC107075864
subclass of: SO_0000673
so part of: LOC107075864
location: complement(join(521338..521964,522168..522364))
location: region:521338-522364:-1
so has part: feature:522168-522364:-1:exon
so has part: feature:521338-521964:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:522168-522364:-1:exon

position:522168:-1
position: 522168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:521338-521964:-1:exon

position:521964:-1
position: 521964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

zbtb3
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: zbtb3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(529783..530690)
location: region:529783-530690:-1
so has part: feature:529783-530690:-1:exon
subclass of: SO_0000010

107075853
type: Gene
SIO_000068: ncbigene

position:529783:-1
position: 529783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530690:-1
position: 530690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529783-530690:-1:exon

zbtb3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: zbtb3
product: zinc finger and BTB domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338814.1
SIO_010081: zbtb3
subclass of: SO_0000673
so part of: zbtb3
location: complement(529783..530690)
location: region:529783-530690:-1
so has part: feature:529783-530690:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529783-530690:-1:exon

zbtb3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: zbtb3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 3
translation: MEGMFQRRGRAEEEEEEYVEGLGAGEEEEEVLAMHMGNPPFLPSHHLLHAHLPHAHAEALTFHPALVSPPSPTSGPGAPGGPPSFPGLLAPPSSSSSSSSTSHLAPLHAPPDQIYFHDFQDPLGPYVEDVPTCATCGKTFSCAYTLRRHAIVHTRERPYECRYCYRSYTQSGDLYRHIRKAHNQDLPLKRSRTDSEPPSLG
SIO_010081: zbtb3
subclass of: SO_0000673
so part of: zbtb3
location: complement(530021..530626)
location: region:530021-530626:-1
so has part: feature:530021-530626:-1:exon

XP_015194300.1
type: Protein
SIO_000068: ncbiprotein

position:530021:-1
position: 530021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530626:-1
position: 530626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530021-530626:-1:exon

trpt1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: trpt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 533746..537275
location: region:533746-537275:1
so has part: feature:533746-537275:1:exon
subclass of: SO_0000010

102684238
type: Gene
SIO_000068: ncbigene

position:533746:1
position: 533746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537275:1
position: 537275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533746-537275:1:exon

trpt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: trpt1
product: tRNA phosphotransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015338811.1
SIO_010081: trpt1
subclass of: SO_0000673
so part of: trpt1
location: join(533746..533997,534887..534944,535419..535565,535840..535921,536049..536218,536328..536505,536582..536638,536716..536826,537013..537275)
location: region:533746-537275:1
so has part: feature:533746-533997:1:exon
so has part: feature:534887-534944:1:exon
so has part: feature:535419-535565:1:exon
so has part: feature:535840-535921:1:exon
so has part: feature:536049-536218:1:exon
so has part: feature:536328-536505:1:exon
so has part: feature:536582-536638:1:exon
so has part: feature:536716-536826:1:exon
so has part: feature:537013-537275:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:533746-533997:1:exon

position:533997:1
position: 533997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:534887-534944:1:exon

position:534887:1
position: 534887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534944:1
position: 534944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:535419-535565:1:exon

position:535419:1
position: 535419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535565:1
position: 535565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:535840-535921:1:exon

position:535840:1
position: 535840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535921:1
position: 535921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:536049-536218:1:exon

position:536049:1
position: 536049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536218:1
position: 536218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:536328-536505:1:exon

position:536328:1
position: 536328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536505:1
position: 536505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:536582-536638:1:exon

position:536582:1
position: 536582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536638:1
position: 536638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:536716-536826:1:exon

position:536716:1
position: 536716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536826:1
position: 536826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:537013-537275:1:exon

position:537013:1
position: 537013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trpt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: trpt1
product: tRNA phosphotransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_015338810.1
SIO_010081: trpt1
subclass of: SO_0000673
so part of: trpt1
location: join(534352..534430,534887..534944,535419..535565,535840..535921,536049..536218,536328..536505,536582..536638,536716..536826,537013..537275)
location: region:534352-537275:1
so has part: feature:534352-534430:1:exon
so has part: feature:534887-534944:1:exon
so has part: feature:535419-535565:1:exon
so has part: feature:535840-535921:1:exon
so has part: feature:536049-536218:1:exon
so has part: feature:536328-536505:1:exon
so has part: feature:536582-536638:1:exon
so has part: feature:536716-536826:1:exon
so has part: feature:537013-537275:1:exon

position:534352:1
position: 534352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534352-534430:1:exon

position:534430:1
position: 534430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:534887-534944:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535419-535565:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:535840-535921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536049-536218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536328-536505:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536582-536638:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:536716-536826:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:537013-537275:1:exon

trpt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: trpt1
product: tRNA phosphotransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015338809.1
SIO_010081: trpt1
subclass of: SO_0000673
so part of: trpt1
location: join(534951..535045,535419..535565,535840..535921,536049..536218,536328..536505,536582..536638,536716..536826,537013..537275)
location: region:534951-537275:1
so has part: feature:534951-535045:1:exon
so has part: feature:535419-535565:1:exon
so has part: feature:535840-535921:1:exon
so has part: feature:536049-536218:1:exon
so has part: feature:536328-536505:1:exon
so has part: feature:536582-536638:1:exon
so has part: feature:536716-536826:1:exon
so has part: feature:537013-537275:1:exon

position:534951:1
position: 534951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534951-535045:1:exon

position:535045:1
position: 535045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:535419-535565:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535840-535921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536049-536218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536328-536505:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536582-536638:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536716-536826:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537013-537275:1:exon

trpt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: trpt1
product: tRNA phosphotransferase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015338812.1
SIO_010081: trpt1
subclass of: SO_0000673
so part of: trpt1
location: join(534956..535045,535840..535921,536049..536218,536328..536505,536582..536638,536716..536826,537013..537275)
location: region:534956-537275:1
so has part: feature:534956-535045:1:exon
so has part: feature:535840-535921:1:exon
so has part: feature:536049-536218:1:exon
so has part: feature:536328-536505:1:exon
so has part: feature:536582-536638:1:exon
so has part: feature:536716-536826:1:exon
so has part: feature:537013-537275:1:exon

position:534956:1
position: 534956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534956-535045:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535840-535921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536049-536218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536328-536505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536582-536638:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536716-536826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:537013-537275:1:exon

trpt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: trpt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA 2'-phosphotransferase 1 isoform X1
translation: MDRGRRGGGGGRGGRHRSRRSEQDPDVRLSKALSFALRHGASQLGLDMSSDGFVSVAELLSRPQFRAYSLADVRRVVETNDKQRFRLRPRPGDGRLEIRANQGHSVQVDDLELTPVVPGSDNVPSCAVHGTYLRHWESIRSRGLSRMSRTHIHLSPGLPGEEGVVSGMRGDCSLAIFIDVSGALQDGIPFFWSDNGVILTPGDAEGRLAPRYFARALRLTEPRRELPLEPRGGVAGEQLTTPTPQ
SIO_010081: trpt1
subclass of: SO_0000673
so part of: trpt1
location: join(535497..535565,535840..535921,536049..536218,536328..536505,536582..536638,536716..536826,537013..537083)
location: region:535497-537083:1
so has part: feature:535497-535565:1:exon
so has part: feature:535840-535921:1:exon
so has part: feature:536049-536218:1:exon
so has part: feature:536328-536505:1:exon
so has part: feature:536582-536638:1:exon
so has part: feature:536716-536826:1:exon
so has part: feature:537013-537083:1:exon

XP_015194295.1
type: Protein
SIO_000068: ncbiprotein

position:535497:1
position: 535497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537083:1
position: 537083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535497-535565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535840-535921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536049-536218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536328-536505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536582-536638:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536716-536826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:537013-537083:1:exon

trpt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: trpt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA 2'-phosphotransferase 1 isoform X1
translation: MDRGRRGGGGGRGGRHRSRRSEQDPDVRLSKALSFALRHGASQLGLDMSSDGFVSVAELLSRPQFRAYSLADVRRVVETNDKQRFRLRPRPGDGRLEIRANQGHSVQVDDLELTPVVPGSDNVPSCAVHGTYLRHWESIRSRGLSRMSRTHIHLSPGLPGEEGVVSGMRGDCSLAIFIDVSGALQDGIPFFWSDNGVILTPGDAEGRLAPRYFARALRLTEPRRELPLEPRGGVAGEQLTTPTPQ
SIO_010081: trpt1
subclass of: SO_0000673
so part of: trpt1
location: join(535497..535565,535840..535921,536049..536218,536328..536505,536582..536638,536716..536826,537013..537083)
location: region:535497-537083:1
so has part: feature:535497-535565:1:exon
so has part: feature:535840-535921:1:exon
so has part: feature:536049-536218:1:exon
so has part: feature:536328-536505:1:exon
so has part: feature:536582-536638:1:exon
so has part: feature:536716-536826:1:exon
so has part: feature:537013-537083:1:exon

XP_015194296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535497-535565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535840-535921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536049-536218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536328-536505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536582-536638:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536716-536826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:537013-537083:1:exon

trpt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: trpt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA 2'-phosphotransferase 1 isoform X1
translation: MDRGRRGGGGGRGGRHRSRRSEQDPDVRLSKALSFALRHGASQLGLDMSSDGFVSVAELLSRPQFRAYSLADVRRVVETNDKQRFRLRPRPGDGRLEIRANQGHSVQVDDLELTPVVPGSDNVPSCAVHGTYLRHWESIRSRGLSRMSRTHIHLSPGLPGEEGVVSGMRGDCSLAIFIDVSGALQDGIPFFWSDNGVILTPGDAEGRLAPRYFARALRLTEPRRELPLEPRGGVAGEQLTTPTPQ
SIO_010081: trpt1
subclass of: SO_0000673
so part of: trpt1
location: join(535497..535565,535840..535921,536049..536218,536328..536505,536582..536638,536716..536826,537013..537083)
location: region:535497-537083:1
so has part: feature:535497-535565:1:exon
so has part: feature:535840-535921:1:exon
so has part: feature:536049-536218:1:exon
so has part: feature:536328-536505:1:exon
so has part: feature:536582-536638:1:exon
so has part: feature:536716-536826:1:exon
so has part: feature:537013-537083:1:exon

XP_015194297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:535497-535565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535840-535921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536049-536218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536328-536505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536582-536638:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536716-536826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:537013-537083:1:exon

trpt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: trpt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA 2'-phosphotransferase 1 isoform X2
translation: MSSDGFVSVAELLSRPQFRAYSLADVRRVVETNDKQRFRLRPRPGDGRLEIRANQGHSVQVDDLELTPVVPGSDNVPSCAVHGTYLRHWESIRSRGLSRMSRTHIHLSPGLPGEEGVVSGMRGDCSLAIFIDVSGALQDGIPFFWSDNGVILTPGDAEGRLAPRYFARALRLTEPRRELPLEPRGGVAGEQLTTPTPQ
SIO_010081: trpt1
subclass of: SO_0000673
so part of: trpt1
location: join(535912..535921,536049..536218,536328..536505,536582..536638,536716..536826,537013..537083)
location: region:535912-537083:1
so has part: feature:535912-535921:1:exon
so has part: feature:536049-536218:1:exon
so has part: feature:536328-536505:1:exon
so has part: feature:536582-536638:1:exon
so has part: feature:536716-536826:1:exon
so has part: feature:537013-537083:1:exon

XP_015194298.1
type: Protein
SIO_000068: ncbiprotein

position:535912:1
position: 535912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535912-535921:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536049-536218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536328-536505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536582-536638:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536716-536826:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:537013-537083:1:exon

fermt3
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: fermt3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(538471..>542451)
location: region:538471-542451:-1
so has part: feature:538471-542451:-1:exon
subclass of: SO_0000010

102684431
type: Gene
SIO_000068: ncbigene

position:538471:-1
position: 538471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542451:-1
position: 542451
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538471-542451:-1:exon

fermt3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: fermt3
product: fermitin family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015338756.1
SIO_010081: fermt3
subclass of: SO_0000673
so part of: fermt3
location: complement(join(538471..538650,539179..539320,539499..539623,539913..540128,540487..540593,541503..541627,541713..541762,542037..542168,542266..>542451))
location: region:538471-542451:-1
so has part: feature:542266-542451:-1:exon
so has part: feature:542037-542168:-1:exon
so has part: feature:541713-541762:-1:exon
so has part: feature:541503-541627:-1:exon
so has part: feature:540487-540593:-1:exon
so has part: feature:539913-540128:-1:exon
so has part: feature:539499-539623:-1:exon
so has part: feature:539179-539320:-1:exon
so has part: feature:538471-538650:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:542266-542451:-1:exon

position:542266:-1
position: 542266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:542037-542168:-1:exon

position:542037:-1
position: 542037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542168:-1
position: 542168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:541713-541762:-1:exon

position:541713:-1
position: 541713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541762:-1
position: 541762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:541503-541627:-1:exon

position:541503:-1
position: 541503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541627:-1
position: 541627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:540487-540593:-1:exon

position:540487:-1
position: 540487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540593:-1
position: 540593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:539913-540128:-1:exon

position:539913:-1
position: 539913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540128:-1
position: 540128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:539499-539623:-1:exon

position:539499:-1
position: 539499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539623:-1
position: 539623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:539179-539320:-1:exon

position:539179:-1
position: 539179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539320:-1
position: 539320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:538471-538650:-1:exon

position:538650:-1
position: 538650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fermt3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: fermt3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fermitin family homolog 3
translation: CVSSLCACLSLSLCVCGVNRTLLCSQYDAVRITQLYEQARWAILLEEIDCTEEEMMLFAALQYHVNKLSQTEPSLGATSPAMDDLDSALQSLEVKMEGETTSIDMLESMMAVPELKAYLKIFRPKRLTLKGYKQYWFVFKDTSISYYKSQEEGFGEPIQQMNLKGCEVAPDVNVAGQKFCIKLLIPAPEGMNEVYLRCENEKQYSQWMGACRLASKGKTMADSTYASEVANIQAFLAMQRSNPGPQPSATDETINTQSLVSPRYQKKYKAKQLTPRILEAHQNVAQLSLLEATMKFIQIWQSLPDFGVSYFVVRFKGCRKDEVLGIANNRLIRIDLAVGDVVKTWRYNNMRQWNVNWDIRQVAIEFEGNINVAFSCVTADCKIVHEYIGGYIFMSTRTKEQSDSLNEELFHKLTGGHEAL
SIO_010081: fermt3
subclass of: SO_0000673
so part of: fermt3
location: complement(join(538471..538650,539179..539320,539499..539623,539913..540128,540487..540593,541503..541627,541713..541762,542037..542168,542266..>542451))
location: region:538471-542451:-1
so has part: feature:542266-542451:-1:exon
so has part: feature:542037-542168:-1:exon
so has part: feature:541713-541762:-1:exon
so has part: feature:541503-541627:-1:exon
so has part: feature:540487-540593:-1:exon
so has part: feature:539913-540128:-1:exon
so has part: feature:539499-539623:-1:exon
so has part: feature:539179-539320:-1:exon
so has part: feature:538471-538650:-1:exon

XP_015194242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:542266-542451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542037-542168:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:541713-541762:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541503-541627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:540487-540593:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:539913-540128:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539499-539623:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539179-539320:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:538471-538650:-1:exon

macrod1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: macrod1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 570504..618457
location: region:570504-618457:1
so has part: feature:570504-618457:1:exon
subclass of: SO_0000010

102684627
type: Gene
SIO_000068: ncbigene

position:570504:1
position: 570504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618457:1
position: 618457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570504-618457:1:exon

macrod1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: macrod1
product: MACRO domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015338757.1
SIO_010081: macrod1
subclass of: SO_0000673
so part of: macrod1
location: join(570504..570648,605255..605284,609394..609510,614721..614845,615078..615108,615959..616032,618325..618457)
location: region:570504-618457:1
so has part: feature:570504-570648:1:exon
so has part: feature:605255-605284:1:exon
so has part: feature:609394-609510:1:exon
so has part: feature:614721-614845:1:exon
so has part: feature:615078-615108:1:exon
so has part: feature:615959-616032:1:exon
so has part: feature:618325-618457:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:570504-570648:1:exon

position:570648:1
position: 570648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:605255-605284:1:exon

position:605255:1
position: 605255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605284:1
position: 605284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:609394-609510:1:exon

position:609394:1
position: 609394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609510:1
position: 609510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:614721-614845:1:exon

position:614721:1
position: 614721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614845:1
position: 614845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:615078-615108:1:exon

position:615078:1
position: 615078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615108:1
position: 615108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:615959-616032:1:exon

position:615959:1
position: 615959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616032:1
position: 616032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:618325-618457:1:exon

position:618325:1
position: 618325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

macrod1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: macrod1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: O-acetyl-ADP-ribose deacetylase MACROD1
translation: MIRFWGSPLFAGQPKGEVHFKSNESLNPKISLFRGDITKLEVDAVVNAANKTLLGGGGVDGAIHRGAGPLLKKECSTLGGCETGQAKLTGAYGLPSKYVIHTVGPIVQTGSVGDRERQALRNCYWSCLETARAQQLRTVAFPCISTGVYGYPPSEAADVALRTVREYLDTHGSQVRRCGANCESVPAQTPDPQPVPLGPSVPLPCLQCSRAQ
SIO_010081: macrod1
subclass of: SO_0000673
so part of: macrod1
location: join(570504..570648,605255..605284,609394..609510,614721..614845,615078..615108,615959..616032,618325..618441)
location: region:570504-618441:1
so has part: feature:570504-570648:1:exon
so has part: feature:605255-605284:1:exon
so has part: feature:609394-609510:1:exon
so has part: feature:614721-614845:1:exon
so has part: feature:615078-615108:1:exon
so has part: feature:615959-616032:1:exon
so has part: feature:618325-618441:1:exon

XP_015194243.1
type: Protein
SIO_000068: ncbiprotein

position:618441:1
position: 618441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570504-570648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:605255-605284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609394-609510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614721-614845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615078-615108:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:615959-616032:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:618325-618441:1:exon

LOC107075867
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(577444..604066)
location: region:577444-604066:-1
so has part: feature:577444-604066:-1:exon
subclass of: SO_0000011

107075867
type: Gene
SIO_000068: ncbigene

position:577444:-1
position: 577444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604066:-1
position: 604066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577444-604066:-1:exon

LOC107075867
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075867
product: uncharacterized LOC107075867
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_001477362.1
SIO_010081: LOC107075867
subclass of: SO_0000673
so part of: LOC107075867
location: complement(join(577444..577705,587997..588549,601353..601893,603996..604066))
location: region:577444-604066:-1
so has part: feature:603996-604066:-1:exon
so has part: feature:601353-601893:-1:exon
so has part: feature:587997-588549:-1:exon
so has part: feature:577444-577705:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:603996-604066:-1:exon

position:603996:-1
position: 603996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:601353-601893:-1:exon

position:601353:-1
position: 601353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601893:-1
position: 601893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:587997-588549:-1:exon

position:587997:-1
position: 587997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588549:-1
position: 588549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:577444-577705:-1:exon

position:577705:-1
position: 577705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102684825
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102684825
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(625345..648601)
location: region:625345-648601:-1
so has part: feature:625345-648601:-1:exon
subclass of: SO_0000010

102684825
type: Gene
SIO_000068: ncbigene

position:625345:-1
position: 625345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648601:-1
position: 648601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625345-648601:-1:exon

LOC102684825
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102684825
product: neuroblast differentiation-associated protein AHNAK-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338758.1
SIO_010081: LOC102684825
subclass of: SO_0000673
so part of: LOC102684825
location: complement(join(625345..628277,629462..630706,634037..635154,645170..646061,648302..648601))
location: region:625345-648601:-1
so has part: feature:648302-648601:-1:exon
so has part: feature:645170-646061:-1:exon
so has part: feature:634037-635154:-1:exon
so has part: feature:629462-630706:-1:exon
so has part: feature:625345-628277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:648302-648601:-1:exon

position:648302:-1
position: 648302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:645170-646061:-1:exon

position:645170:-1
position: 645170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646061:-1
position: 646061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:634037-635154:-1:exon

position:634037:-1
position: 634037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635154:-1
position: 635154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:629462-630706:-1:exon

position:629462:-1
position: 629462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630706:-1
position: 630706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:625345-628277:-1:exon

position:628277:-1
position: 628277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102684825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102684825
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroblast differentiation-associated protein AHNAK-like
translation: MRLELRRPLWETRPLDTGRCSPLRADSPGRGAGRGPLLLLGPRGRARPLAVASFTQQQTERRKGKSSRKESGNAILLPLGAAGAEGGLTPGLPQWRRHLVKIKPRLRSEDLAEGADVHTEQHSSTGSDGSTITTTFTRRVTTYTVDLPGGASPELKVRAPRPEDVHSSQIRVPHISFGGRGAEGSGEGGTASASEVRWAGGLRTATTTTTTTTTAAAASEAGSGGPAGEASEKTIHFKVPGFGLSGAKVEGVSGVSGVSGVSAAGDGGARMPGGKMIITETYRIGGREVEVPSSRFCGGRVDVALPGAPGDPRIAGAARSGDARVSGVGISGARVSGSGAEVSGTGVEAGLKAAGVKVDVGGPGVPSVDVSTSKTAGISISGPRLEGDLKAPKVGIKNFSLKGPKVKGDAELPKIEGDLKVTKPDIEGPDLEVKSQEGGFKMPKFKMPKFGFKGPKVEGPDVDINLPKADIDIKGPKIEGNIKAPKIDVEGPEVDIEGPEGKIKGPKFKMPSVSGPKISMPDVDFNLKGPKVKGEVDVPKIKGDIKAPNVDIEGPDIKLEAPDIDVKGPEGGFKMPKFKMPKFGFKGPHVEGPDVDINLPKADIDIKGPKIEGGIKGPKIDVEGPDVDIEGPEGKIKGPKFKMPSITGPKISMPDVDFNLKGPKIEGDIKGPKVDIDAPDVSLEGPDVDIEGPEGGFKMPKIKMPKFGFKGPKVEGPDISGDIKGPEVNIEGPDVDIEGPEGKIKGPKFKMPHISGPNIKMPDFNLKGPKIEGDFKGPKVDIDAPDVSFEGPDVDIEGPEGGFKMPKIKMPKFGFKGPKVEGPDVDLSGDIKGPEVNIEGPDVEIERPEFKLPKFKGPKFGIKSPKLEGPEVELPSAEIDVSGPKIKGDIRVPGMDLDVNAPGADIDLKSPDFSVEGPDANIKMPKVKKPKFGLGIKSPKADVKLPEGDVSLEAPDVNLKGKKGKFKMPKVKAKGKKPDLSVDVKSPELDVDIGSPDVNLKGPKVKKPLFGKLHFPDVEFDIKSPKIKGDASVSGGLKTPDMDLSSPNLKADIQTPDAELPDVSMEGPDVKVKKPKIKMPKFNISGPKLKTPDLDLKGPKLDAELSGPDVSVDAPDVDLEGPEVKGKGKFKMPGFKMSAPKVSGPDFDLNLKGPKIKGDVDVSGDIKGPRLDIEGPDMNIEGPEGGPGFKMPSLDIKAPKISAPDIDINLKGPKIKTPKADVNIEGGDIDVEGPEGGFKMPKVKMPKFGFKDPKLEGPEIDVRPLKAGVDISGDIAGPKVNFEGPDVSVPNVDVSLKGPKVKGDISGPRVEGGIKGPDVNVEGPDVDIEGGLKMPKIKMPKFGIKGPRLEGPEGDFNLSGPKIQGDIKGPKVDVSGPSMDIKSGDLELETPEIKGKKSKFKFPRFGFGSPKLEGPDLDVKMKGPKLSGDFDGSADVSLSGSPLQGGIQGPSLDLGAPDVNVKGPKISGGAGGGLHVKGGAGVGVDAPGLEASGGGLDFGDAKVTFPKLKVPKFGIALPQLEGPEMGVDVGTGGAAGAGASLQGPSIGGHLGSPSLEVTGPEVKAGGGGAGGKAKIKMPKFFGKSKAKGGSAADLSLQGPELEVSSGAAGVKASKGLSLSSGELLSGDLSAGGGAGIRVSPAGKSASLDLLKKPRHRSSSLSDDAGVPSPSSPTGHLEAEGGGDLSFEAGGAKVKGKKGKLKFGTFGGFGSKSKGSYEVTLGEEGEARVEGAGGVSLPAKKSRISSSSSSDSGTRGGFRFPRVELAVSKK
SIO_010081: LOC102684825
subclass of: SO_0000673
so part of: LOC102684825
location: complement(join(626523..628277,629462..630706,634037..635154,645170..646061,648302..648601))
location: region:626523-648601:-1
so has part: feature:648302-648601:-1:exon
so has part: feature:645170-646061:-1:exon
so has part: feature:634037-635154:-1:exon
so has part: feature:629462-630706:-1:exon
so has part: feature:626523-628277:-1:exon

XP_015194244.1
type: Protein
SIO_000068: ncbiprotein

position:626523:-1
position: 626523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648302-648601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645170-646061:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634037-635154:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:629462-630706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626523-628277:-1:exon

LOC102685022
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102685022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(699916..709090)
location: region:699916-709090:-1
so has part: feature:699916-709090:-1:exon
subclass of: SO_0000010

102685022
type: Gene
SIO_000068: ncbigene

position:699916:-1
position: 699916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709090:-1
position: 709090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699916-709090:-1:exon

LOC102685022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102685022
product: phospholipase D3-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015338790.1
SIO_010081: LOC102685022
subclass of: SO_0000673
so part of: LOC102685022
location: complement(join(699916..701101,702250..702349,702449..702754,702862..703065,703145..703272,703380..703494,704026..704209,704550..704791,705040..705897,706573..706767,708862..709090))
location: region:699916-709090:-1
so has part: feature:708862-709090:-1:exon
so has part: feature:706573-706767:-1:exon
so has part: feature:705040-705897:-1:exon
so has part: feature:704550-704791:-1:exon
so has part: feature:704026-704209:-1:exon
so has part: feature:703380-703494:-1:exon
so has part: feature:703145-703272:-1:exon
so has part: feature:702862-703065:-1:exon
so has part: feature:702449-702754:-1:exon
so has part: feature:702250-702349:-1:exon
so has part: feature:699916-701101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708862-709090:-1:exon

position:708862:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:706573-706767:-1:exon

position:706573:-1
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reference: sequence
type: ReverseStrandPosition
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position:706767:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:705040-705897:-1:exon

position:705040:-1
position: 705040
reference: sequence
type: ReverseStrandPosition
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position:705897:-1
position: 705897
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:704550-704791:-1:exon

position:704550:-1
position: 704550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704791:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:704026-704209:-1:exon

position:704026:-1
position: 704026
reference: sequence
type: ReverseStrandPosition
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position:704209:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:703380-703494:-1:exon

position:703380:-1
position: 703380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703494:-1
position: 703494
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:703145-703272:-1:exon

position:703145:-1
position: 703145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703272:-1
position: 703272
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:702862-703065:-1:exon

position:702862:-1
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reference: sequence
type: ReverseStrandPosition
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position:703065:-1
position: 703065
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:702449-702754:-1:exon

position:702449:-1
position: 702449
reference: sequence
type: ReverseStrandPosition
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position:702754:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:702250-702349:-1:exon

position:702250:-1
position: 702250
reference: sequence
type: ReverseStrandPosition
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position:702349:-1
position: 702349
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:699916-701101:-1:exon

position:701101:-1
position: 701101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102685022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102685022
product: phospholipase D3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015338785.1
SIO_010081: LOC102685022
subclass of: SO_0000673
so part of: LOC102685022
location: complement(join(699916..701101,702250..702349,702449..702754,702862..703065,703145..703272,703380..703494,704026..704209,704550..704791,705040..705897,706573..706767,707228..707671,708862..709090))
location: region:699916-709090:-1
so has part: feature:708862-709090:-1:exon
so has part: feature:707228-707671:-1:exon
so has part: feature:706573-706767:-1:exon
so has part: feature:705040-705897:-1:exon
so has part: feature:704550-704791:-1:exon
so has part: feature:704026-704209:-1:exon
so has part: feature:703380-703494:-1:exon
so has part: feature:703145-703272:-1:exon
so has part: feature:702862-703065:-1:exon
so has part: feature:702449-702754:-1:exon
so has part: feature:702250-702349:-1:exon
so has part: feature:699916-701101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708862-709090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:707228-707671:-1:exon

position:707228:-1
position: 707228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707671:-1
position: 707671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:706573-706767:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:705040-705897:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704550-704791:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704026-704209:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703380-703494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703145-703272:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702862-703065:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:702449-702754:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:702250-702349:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:699916-701101:-1:exon

LOC102685022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102685022
product: phospholipase D3-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015338789.1
SIO_010081: LOC102685022
subclass of: SO_0000673
so part of: LOC102685022
location: complement(join(699916..701101,702250..702349,702449..702754,702862..703065,703145..703272,703380..703494,704026..704209,704550..704791,705040..705897,706573..706767,708717..709090))
location: region:699916-709090:-1
so has part: feature:708717-709090:-1:exon
so has part: feature:706573-706767:-1:exon
so has part: feature:705040-705897:-1:exon
so has part: feature:704550-704791:-1:exon
so has part: feature:704026-704209:-1:exon
so has part: feature:703380-703494:-1:exon
so has part: feature:703145-703272:-1:exon
so has part: feature:702862-703065:-1:exon
so has part: feature:702449-702754:-1:exon
so has part: feature:702250-702349:-1:exon
so has part: feature:699916-701101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708717-709090:-1:exon

position:708717:-1
position: 708717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:706573-706767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:705040-705897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704550-704791:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704026-704209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703380-703494:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703145-703272:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:702862-703065:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702449-702754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:702250-702349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:699916-701101:-1:exon

LOC102685022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102685022
product: phospholipase D3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015338784.1
SIO_010081: LOC102685022
subclass of: SO_0000673
so part of: LOC102685022
location: complement(join(699916..701101,702250..702349,702449..702754,702862..703065,703145..703272,703380..703494,704026..704209,704550..704791,705040..705897,706573..706767,707228..707671,708717..709090))
location: region:699916-709090:-1
so has part: feature:708717-709090:-1:exon
so has part: feature:707228-707671:-1:exon
so has part: feature:706573-706767:-1:exon
so has part: feature:705040-705897:-1:exon
so has part: feature:704550-704791:-1:exon
so has part: feature:704026-704209:-1:exon
so has part: feature:703380-703494:-1:exon
so has part: feature:703145-703272:-1:exon
so has part: feature:702862-703065:-1:exon
so has part: feature:702449-702754:-1:exon
so has part: feature:702250-702349:-1:exon
so has part: feature:699916-701101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708717-709090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:707228-707671:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:706573-706767:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:705040-705897:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704550-704791:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704026-704209:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703380-703494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703145-703272:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702862-703065:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:702449-702754:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:702250-702349:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:699916-701101:-1:exon

LOC102685022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102685022
product: phospholipase D3-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015338788.1
SIO_010081: LOC102685022
subclass of: SO_0000673
so part of: LOC102685022
location: complement(join(699916..701101,702250..702349,702449..702754,702862..703065,703145..703272,703380..703494,704026..704209,704550..704791,705040..705897,706573..706767,707328..708207))
location: region:699916-708207:-1
so has part: feature:707328-708207:-1:exon
so has part: feature:706573-706767:-1:exon
so has part: feature:705040-705897:-1:exon
so has part: feature:704550-704791:-1:exon
so has part: feature:704026-704209:-1:exon
so has part: feature:703380-703494:-1:exon
so has part: feature:703145-703272:-1:exon
so has part: feature:702862-703065:-1:exon
so has part: feature:702449-702754:-1:exon
so has part: feature:702250-702349:-1:exon
so has part: feature:699916-701101:-1:exon

position:708207:-1
position: 708207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707328-708207:-1:exon

position:707328:-1
position: 707328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:706573-706767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:705040-705897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704550-704791:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704026-704209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703380-703494:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703145-703272:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:702862-703065:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702449-702754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:702250-702349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:699916-701101:-1:exon

LOC102685022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102685022
product: phospholipase D3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015338786.1
SIO_010081: LOC102685022
subclass of: SO_0000673
so part of: LOC102685022
location: complement(join(699916..701101,702250..702349,702449..702754,702862..703065,703145..703272,703380..703494,704026..704209,704550..704740,705040..705897,706573..706767,707228..708207))
location: region:699916-708207:-1
so has part: feature:707228-708207:-1:exon
so has part: feature:706573-706767:-1:exon
so has part: feature:705040-705897:-1:exon
so has part: feature:704550-704740:-1:exon
so has part: feature:704026-704209:-1:exon
so has part: feature:703380-703494:-1:exon
so has part: feature:703145-703272:-1:exon
so has part: feature:702862-703065:-1:exon
so has part: feature:702449-702754:-1:exon
so has part: feature:702250-702349:-1:exon
so has part: feature:699916-701101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:707228-708207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:706573-706767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:705040-705897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704550-704740:-1:exon

position:704740:-1
position: 704740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:704026-704209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703380-703494:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703145-703272:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:702862-703065:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702449-702754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:702250-702349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:699916-701101:-1:exon

LOC102685022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102685022
product: phospholipase D3-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015338791.1
SIO_010081: LOC102685022
subclass of: SO_0000673
so part of: LOC102685022
location: complement(join(699916..701101,702250..702349,702449..702754,702862..703065,703145..703272,703380..703494,704026..704209,704550..704791,705040..705897,706573..706767,706901..707221))
location: region:699916-707221:-1
so has part: feature:706901-707221:-1:exon
so has part: feature:706573-706767:-1:exon
so has part: feature:705040-705897:-1:exon
so has part: feature:704550-704791:-1:exon
so has part: feature:704026-704209:-1:exon
so has part: feature:703380-703494:-1:exon
so has part: feature:703145-703272:-1:exon
so has part: feature:702862-703065:-1:exon
so has part: feature:702449-702754:-1:exon
so has part: feature:702250-702349:-1:exon
so has part: feature:699916-701101:-1:exon

position:707221:-1
position: 707221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706901-707221:-1:exon

position:706901:-1
position: 706901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:706573-706767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:705040-705897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704550-704791:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704026-704209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703380-703494:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703145-703272:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:702862-703065:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702449-702754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:702250-702349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:699916-701101:-1:exon

LOC102685022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102685022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase D3-like isoform X2
translation: MGRRRSARLARAETPLRRSARLRDTLGGPVEEVVDMSAEQSEGEDAQDLQPRPGIRAHHSASGDPAPVEPEPESELEEPEARGRGRPRQHPQLDSMCPSVILRRLDLEDREGEETEPPRAAAPKAPTSRIPTFQSSGARLLRPVDRPPLGKPPPSQLPVRPWERAAKPHLELGWSDTALSPRPALRAETGTPRPEAAQEAGAGALAPETRGGQLERGTPAPRAEATSREASKTQPRRGPPVPSEAKPREDTPPASEEGGEEAEAEREEVGSEVGSEAEREEAGSEAEEKEAGEEEVDSEAEEKEVGSEAGEEEAEQEEAAPEAEAEGEEVGSEAEAEAEREAVVFEVGARSEKPALNPRGRRAAGGREARQEGAGRPGPRGRLRRYCSTLLCLLPPLLLLLGGGGLFLWPSGRPGLAGALLAPLDLDWLWAGDLWARQEACGSDCSLSLLESLPEGLEYPPGSPRLTPISQAWRDLLHRANHSVSIAAFYLTLRDTDLEASEPSALEGKRVFEALRGLPARGVGLRIAVNSPQTYPRDTDDLALAGAEVRPVYLQNLTGGILHTKLWEVDGQHAYLGSANMDWRSLTQVKELAVSVTNCSCLARDVSRLFQAYWLLGSPAGGAVPARWPRRLSALSSAQRPLQLQLNGLPAEVYLSSAPPPLSADGRTDDLSAILGVISDARRFVYVSVMDFLPASRYTEPARFWPPIDSALRAAACARGVEVRLLVSCWPHSDQPMFVFLESLGVLNHPPLSCTLHVKVFEVPSTKEQKMIPYARVNHAKYMVTDRVAYIGTSNWSENYFTHTAGVGLVVNQTGAPAGAGKRSVQSDLQAVFERDWDSGFAQPLSSEHAHHCGARESA
SIO_010081: LOC102685022
subclass of: SO_0000673
so part of: LOC102685022
location: complement(join(700896..701101,702250..702349,702449..702754,702862..703065,703145..703272,703380..703494,704026..704209,704550..704740,705040..705897,706573..706767,707228..707320))
location: region:700896-707320:-1
so has part: feature:707228-707320:-1:exon
so has part: feature:706573-706767:-1:exon
so has part: feature:705040-705897:-1:exon
so has part: feature:704550-704740:-1:exon
so has part: feature:704026-704209:-1:exon
so has part: feature:703380-703494:-1:exon
so has part: feature:703145-703272:-1:exon
so has part: feature:702862-703065:-1:exon
so has part: feature:702449-702754:-1:exon
so has part: feature:702250-702349:-1:exon
so has part: feature:700896-701101:-1:exon

XP_015194272.1
type: Protein
SIO_000068: ncbiprotein

position:700896:-1
position: 700896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707320:-1
position: 707320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707228-707320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:706573-706767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:705040-705897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704550-704740:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704026-704209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703380-703494:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703145-703272:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:702862-703065:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702449-702754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:702250-702349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:700896-701101:-1:exon

LOC102685022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102685022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102685022 isoform X1
translation: MGRRRSARLARAETPLRRSARLRDTLGGPVEEVVDMSAEQSEGEDAQDLQPRPGIRAHHSASGDPAPVEPEPESELEEPEARGRGRPRQHPQLDSMCPSVILRRLDLEDREGEETEPPRAAAPKAPTSRIPTFQSSGARLLRPVDRPPLGKPPPSQLPVRPWERAAKPHLELGWSDTALSPRPALRAETGTPRPEAAQEAGAGALAPETRGGQLERGTPAPRAEATSREASKTQPRRGPPVPSEAKPREDTPPASEEGGEEAEAEREEVGSEVGSEAEREEAGSEAEEKEAGEEEVDSEAEEKEVGSEAGEEEAEQEEAAPEAEAEGEEVGSEAEAEAEREAVVFEVGARSEKPALNPRGRRAAGGREARQEGAGRPGPRGRQTGSPWRLTGLLSPSLQLRRYCSTLLCLLPPLLLLLGGGGLFLWPSGRPGLAGALLAPLDLDWLWAGDLWARQEACGSDCSLSLLESLPEGLEYPPGSPRLTPISQAWRDLLHRANHSVSIAAFYLTLRDTDLEASEPSALEGKRVFEALRGLPARGVGLRIAVNSPQTYPRDTDDLALAGAEVRPVYLQNLTGGILHTKLWEVDGQHAYLGSANMDWRSLTQVKELAVSVTNCSCLARDVSRLFQAYWLLGSPAGGAVPARWPRRLSALSSAQRPLQLQLNGLPAEVYLSSAPPPLSADGRTDDLSAILGVISDARRFVYVSVMDFLPASRYTEPARFWPPIDSALRAAACARGVEVRLLVSCWPHSDQPMFVFLESLGVLNHPPLSCTLHVKVFEVPSTKEQKMIPYARVNHAKYMVTDRVAYIGTSNWSENYFTHTAGVGLVVNQTGAPAGAGKRSVQSDLQAVFERDWDSGFAQPLSSEHAHHCGARESA
SIO_010081: LOC102685022
subclass of: SO_0000673
so part of: LOC102685022
location: complement(join(700896..701101,702250..702349,702449..702754,702862..703065,703145..703272,703380..703494,704026..704209,704550..704791,705040..705897,706573..706767,707228..707320))
location: region:700896-707320:-1
so has part: feature:707228-707320:-1:exon
so has part: feature:706573-706767:-1:exon
so has part: feature:705040-705897:-1:exon
so has part: feature:704550-704791:-1:exon
so has part: feature:704026-704209:-1:exon
so has part: feature:703380-703494:-1:exon
so has part: feature:703145-703272:-1:exon
so has part: feature:702862-703065:-1:exon
so has part: feature:702449-702754:-1:exon
so has part: feature:702250-702349:-1:exon
so has part: feature:700896-701101:-1:exon

XP_015194270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:707228-707320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:706573-706767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:705040-705897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704550-704791:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704026-704209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703380-703494:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703145-703272:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:702862-703065:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702449-702754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:702250-702349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:700896-701101:-1:exon

LOC102685022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102685022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102685022 isoform X1
translation: MGRRRSARLARAETPLRRSARLRDTLGGPVEEVVDMSAEQSEGEDAQDLQPRPGIRAHHSASGDPAPVEPEPESELEEPEARGRGRPRQHPQLDSMCPSVILRRLDLEDREGEETEPPRAAAPKAPTSRIPTFQSSGARLLRPVDRPPLGKPPPSQLPVRPWERAAKPHLELGWSDTALSPRPALRAETGTPRPEAAQEAGAGALAPETRGGQLERGTPAPRAEATSREASKTQPRRGPPVPSEAKPREDTPPASEEGGEEAEAEREEVGSEVGSEAEREEAGSEAEEKEAGEEEVDSEAEEKEVGSEAGEEEAEQEEAAPEAEAEGEEVGSEAEAEAEREAVVFEVGARSEKPALNPRGRRAAGGREARQEGAGRPGPRGRQTGSPWRLTGLLSPSLQLRRYCSTLLCLLPPLLLLLGGGGLFLWPSGRPGLAGALLAPLDLDWLWAGDLWARQEACGSDCSLSLLESLPEGLEYPPGSPRLTPISQAWRDLLHRANHSVSIAAFYLTLRDTDLEASEPSALEGKRVFEALRGLPARGVGLRIAVNSPQTYPRDTDDLALAGAEVRPVYLQNLTGGILHTKLWEVDGQHAYLGSANMDWRSLTQVKELAVSVTNCSCLARDVSRLFQAYWLLGSPAGGAVPARWPRRLSALSSAQRPLQLQLNGLPAEVYLSSAPPPLSADGRTDDLSAILGVISDARRFVYVSVMDFLPASRYTEPARFWPPIDSALRAAACARGVEVRLLVSCWPHSDQPMFVFLESLGVLNHPPLSCTLHVKVFEVPSTKEQKMIPYARVNHAKYMVTDRVAYIGTSNWSENYFTHTAGVGLVVNQTGAPAGAGKRSVQSDLQAVFERDWDSGFAQPLSSEHAHHCGARESA
SIO_010081: LOC102685022
subclass of: SO_0000673
so part of: LOC102685022
location: complement(join(700896..701101,702250..702349,702449..702754,702862..703065,703145..703272,703380..703494,704026..704209,704550..704791,705040..705897,706573..706767,707228..707320))
location: region:700896-707320:-1
so has part: feature:707228-707320:-1:exon
so has part: feature:706573-706767:-1:exon
so has part: feature:705040-705897:-1:exon
so has part: feature:704550-704791:-1:exon
so has part: feature:704026-704209:-1:exon
so has part: feature:703380-703494:-1:exon
so has part: feature:703145-703272:-1:exon
so has part: feature:702862-703065:-1:exon
so has part: feature:702449-702754:-1:exon
so has part: feature:702250-702349:-1:exon
so has part: feature:700896-701101:-1:exon

XP_015194271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:707228-707320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:706573-706767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:705040-705897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704550-704791:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704026-704209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703380-703494:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703145-703272:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:702862-703065:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702449-702754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:702250-702349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:700896-701101:-1:exon

LOC102685022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102685022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase D3-like isoform X3
translation: MSAEQSEGEDAQDLQPRPGIRAHHSASGDPAPVEPEPESELEEPEARGRGRPRQHPQLDSMCPSVILRRLDLEDREGEETEPPRAAAPKAPTSRIPTFQSSGARLLRPVDRPPLGKPPPSQLPVRPWERAAKPHLELGWSDTALSPRPALRAETGTPRPEAAQEAGAGALAPETRGGQLERGTPAPRAEATSREASKTQPRRGPPVPSEAKPREDTPPASEEGGEEAEAEREEVGSEVGSEAEREEAGSEAEEKEAGEEEVDSEAEEKEVGSEAGEEEAEQEEAAPEAEAEGEEVGSEAEAEAEREAVVFEVGARSEKPALNPRGRRAAGGREARQEGAGRPGPRGRQTGSPWRLTGLLSPSLQLRRYCSTLLCLLPPLLLLLGGGGLFLWPSGRPGLAGALLAPLDLDWLWAGDLWARQEACGSDCSLSLLESLPEGLEYPPGSPRLTPISQAWRDLLHRANHSVSIAAFYLTLRDTDLEASEPSALEGKRVFEALRGLPARGVGLRIAVNSPQTYPRDTDDLALAGAEVRPVYLQNLTGGILHTKLWEVDGQHAYLGSANMDWRSLTQVKELAVSVTNCSCLARDVSRLFQAYWLLGSPAGGAVPARWPRRLSALSSAQRPLQLQLNGLPAEVYLSSAPPPLSADGRTDDLSAILGVISDARRFVYVSVMDFLPASRYTEPARFWPPIDSALRAAACARGVEVRLLVSCWPHSDQPMFVFLESLGVLNHPPLSCTLHVKVFEVPSTKEQKMIPYARVNHAKYMVTDRVAYIGTSNWSENYFTHTAGVGLVVNQTGAPAGAGKRSVQSDLQAVFERDWDSGFAQPLSSEHAHHCGARESA
SIO_010081: LOC102685022
subclass of: SO_0000673
so part of: LOC102685022
location: complement(join(700896..701101,702250..702349,702449..702754,702862..703065,703145..703272,703380..703494,704026..704209,704550..704791,705040..705897,706573..706755))
location: region:700896-706755:-1
so has part: feature:706573-706755:-1:exon
so has part: feature:705040-705897:-1:exon
so has part: feature:704550-704791:-1:exon
so has part: feature:704026-704209:-1:exon
so has part: feature:703380-703494:-1:exon
so has part: feature:703145-703272:-1:exon
so has part: feature:702862-703065:-1:exon
so has part: feature:702449-702754:-1:exon
so has part: feature:702250-702349:-1:exon
so has part: feature:700896-701101:-1:exon

XP_015194274.1
type: Protein
SIO_000068: ncbiprotein

position:706755:-1
position: 706755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706573-706755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705040-705897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704550-704791:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704026-704209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703380-703494:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703145-703272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:702862-703065:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:702449-702754:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702250-702349:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:700896-701101:-1:exon

LOC102685022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102685022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase D3-like isoform X3
translation: MSAEQSEGEDAQDLQPRPGIRAHHSASGDPAPVEPEPESELEEPEARGRGRPRQHPQLDSMCPSVILRRLDLEDREGEETEPPRAAAPKAPTSRIPTFQSSGARLLRPVDRPPLGKPPPSQLPVRPWERAAKPHLELGWSDTALSPRPALRAETGTPRPEAAQEAGAGALAPETRGGQLERGTPAPRAEATSREASKTQPRRGPPVPSEAKPREDTPPASEEGGEEAEAEREEVGSEVGSEAEREEAGSEAEEKEAGEEEVDSEAEEKEVGSEAGEEEAEQEEAAPEAEAEGEEVGSEAEAEAEREAVVFEVGARSEKPALNPRGRRAAGGREARQEGAGRPGPRGRQTGSPWRLTGLLSPSLQLRRYCSTLLCLLPPLLLLLGGGGLFLWPSGRPGLAGALLAPLDLDWLWAGDLWARQEACGSDCSLSLLESLPEGLEYPPGSPRLTPISQAWRDLLHRANHSVSIAAFYLTLRDTDLEASEPSALEGKRVFEALRGLPARGVGLRIAVNSPQTYPRDTDDLALAGAEVRPVYLQNLTGGILHTKLWEVDGQHAYLGSANMDWRSLTQVKELAVSVTNCSCLARDVSRLFQAYWLLGSPAGGAVPARWPRRLSALSSAQRPLQLQLNGLPAEVYLSSAPPPLSADGRTDDLSAILGVISDARRFVYVSVMDFLPASRYTEPARFWPPIDSALRAAACARGVEVRLLVSCWPHSDQPMFVFLESLGVLNHPPLSCTLHVKVFEVPSTKEQKMIPYARVNHAKYMVTDRVAYIGTSNWSENYFTHTAGVGLVVNQTGAPAGAGKRSVQSDLQAVFERDWDSGFAQPLSSEHAHHCGARESA
SIO_010081: LOC102685022
subclass of: SO_0000673
so part of: LOC102685022
location: complement(join(700896..701101,702250..702349,702449..702754,702862..703065,703145..703272,703380..703494,704026..704209,704550..704791,705040..705897,706573..706755))
location: region:700896-706755:-1
so has part: feature:706573-706755:-1:exon
so has part: feature:705040-705897:-1:exon
so has part: feature:704550-704791:-1:exon
so has part: feature:704026-704209:-1:exon
so has part: feature:703380-703494:-1:exon
so has part: feature:703145-703272:-1:exon
so has part: feature:702862-703065:-1:exon
so has part: feature:702449-702754:-1:exon
so has part: feature:702250-702349:-1:exon
so has part: feature:700896-701101:-1:exon

XP_015194275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:706573-706755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705040-705897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704550-704791:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704026-704209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703380-703494:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703145-703272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:702862-703065:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:702449-702754:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702250-702349:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:700896-701101:-1:exon

LOC102685022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102685022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase D3-like isoform X3
translation: MSAEQSEGEDAQDLQPRPGIRAHHSASGDPAPVEPEPESELEEPEARGRGRPRQHPQLDSMCPSVILRRLDLEDREGEETEPPRAAAPKAPTSRIPTFQSSGARLLRPVDRPPLGKPPPSQLPVRPWERAAKPHLELGWSDTALSPRPALRAETGTPRPEAAQEAGAGALAPETRGGQLERGTPAPRAEATSREASKTQPRRGPPVPSEAKPREDTPPASEEGGEEAEAEREEVGSEVGSEAEREEAGSEAEEKEAGEEEVDSEAEEKEVGSEAGEEEAEQEEAAPEAEAEGEEVGSEAEAEAEREAVVFEVGARSEKPALNPRGRRAAGGREARQEGAGRPGPRGRQTGSPWRLTGLLSPSLQLRRYCSTLLCLLPPLLLLLGGGGLFLWPSGRPGLAGALLAPLDLDWLWAGDLWARQEACGSDCSLSLLESLPEGLEYPPGSPRLTPISQAWRDLLHRANHSVSIAAFYLTLRDTDLEASEPSALEGKRVFEALRGLPARGVGLRIAVNSPQTYPRDTDDLALAGAEVRPVYLQNLTGGILHTKLWEVDGQHAYLGSANMDWRSLTQVKELAVSVTNCSCLARDVSRLFQAYWLLGSPAGGAVPARWPRRLSALSSAQRPLQLQLNGLPAEVYLSSAPPPLSADGRTDDLSAILGVISDARRFVYVSVMDFLPASRYTEPARFWPPIDSALRAAACARGVEVRLLVSCWPHSDQPMFVFLESLGVLNHPPLSCTLHVKVFEVPSTKEQKMIPYARVNHAKYMVTDRVAYIGTSNWSENYFTHTAGVGLVVNQTGAPAGAGKRSVQSDLQAVFERDWDSGFAQPLSSEHAHHCGARESA
SIO_010081: LOC102685022
subclass of: SO_0000673
so part of: LOC102685022
location: complement(join(700896..701101,702250..702349,702449..702754,702862..703065,703145..703272,703380..703494,704026..704209,704550..704791,705040..705897,706573..706755))
location: region:700896-706755:-1
so has part: feature:706573-706755:-1:exon
so has part: feature:705040-705897:-1:exon
so has part: feature:704550-704791:-1:exon
so has part: feature:704026-704209:-1:exon
so has part: feature:703380-703494:-1:exon
so has part: feature:703145-703272:-1:exon
so has part: feature:702862-703065:-1:exon
so has part: feature:702449-702754:-1:exon
so has part: feature:702250-702349:-1:exon
so has part: feature:700896-701101:-1:exon

XP_015194276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:706573-706755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705040-705897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704550-704791:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704026-704209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703380-703494:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703145-703272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:702862-703065:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:702449-702754:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702250-702349:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:700896-701101:-1:exon

LOC102685022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102685022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase D3-like isoform X3
translation: MSAEQSEGEDAQDLQPRPGIRAHHSASGDPAPVEPEPESELEEPEARGRGRPRQHPQLDSMCPSVILRRLDLEDREGEETEPPRAAAPKAPTSRIPTFQSSGARLLRPVDRPPLGKPPPSQLPVRPWERAAKPHLELGWSDTALSPRPALRAETGTPRPEAAQEAGAGALAPETRGGQLERGTPAPRAEATSREASKTQPRRGPPVPSEAKPREDTPPASEEGGEEAEAEREEVGSEVGSEAEREEAGSEAEEKEAGEEEVDSEAEEKEVGSEAGEEEAEQEEAAPEAEAEGEEVGSEAEAEAEREAVVFEVGARSEKPALNPRGRRAAGGREARQEGAGRPGPRGRQTGSPWRLTGLLSPSLQLRRYCSTLLCLLPPLLLLLGGGGLFLWPSGRPGLAGALLAPLDLDWLWAGDLWARQEACGSDCSLSLLESLPEGLEYPPGSPRLTPISQAWRDLLHRANHSVSIAAFYLTLRDTDLEASEPSALEGKRVFEALRGLPARGVGLRIAVNSPQTYPRDTDDLALAGAEVRPVYLQNLTGGILHTKLWEVDGQHAYLGSANMDWRSLTQVKELAVSVTNCSCLARDVSRLFQAYWLLGSPAGGAVPARWPRRLSALSSAQRPLQLQLNGLPAEVYLSSAPPPLSADGRTDDLSAILGVISDARRFVYVSVMDFLPASRYTEPARFWPPIDSALRAAACARGVEVRLLVSCWPHSDQPMFVFLESLGVLNHPPLSCTLHVKVFEVPSTKEQKMIPYARVNHAKYMVTDRVAYIGTSNWSENYFTHTAGVGLVVNQTGAPAGAGKRSVQSDLQAVFERDWDSGFAQPLSSEHAHHCGARESA
SIO_010081: LOC102685022
subclass of: SO_0000673
so part of: LOC102685022
location: complement(join(700896..701101,702250..702349,702449..702754,702862..703065,703145..703272,703380..703494,704026..704209,704550..704791,705040..705897,706573..706755))
location: region:700896-706755:-1
so has part: feature:706573-706755:-1:exon
so has part: feature:705040-705897:-1:exon
so has part: feature:704550-704791:-1:exon
so has part: feature:704026-704209:-1:exon
so has part: feature:703380-703494:-1:exon
so has part: feature:703145-703272:-1:exon
so has part: feature:702862-703065:-1:exon
so has part: feature:702449-702754:-1:exon
so has part: feature:702250-702349:-1:exon
so has part: feature:700896-701101:-1:exon

XP_015194277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:706573-706755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705040-705897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704550-704791:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704026-704209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703380-703494:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703145-703272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:702862-703065:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:702449-702754:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702250-702349:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:700896-701101:-1:exon

LOC107075866
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075866
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 709831..711056
location: region:709831-711056:1
so has part: feature:709831-711056:1:exon
subclass of: SO_0000011

107075866
type: Gene
SIO_000068: ncbigene

position:709831:1
position: 709831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711056:1
position: 711056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709831-711056:1:exon

LOC107075866
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075866
product: uncharacterized LOC107075866
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_001477361.1
SIO_010081: LOC107075866
subclass of: SO_0000673
so part of: LOC107075866
location: join(709831..710378,710490..710694,710827..711056)
location: region:709831-711056:1
so has part: feature:709831-710378:1:exon
so has part: feature:710490-710694:1:exon
so has part: feature:710827-711056:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:709831-710378:1:exon

position:710378:1
position: 710378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:710490-710694:1:exon

position:710490:1
position: 710490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710694:1
position: 710694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:710827-711056:1:exon

position:710827:1
position: 710827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

syvn1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: syvn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(715203..>724172)
location: region:715203-724172:-1
so has part: feature:715203-724172:-1:exon
subclass of: SO_0000010

102685422
type: Gene
SIO_000068: ncbigene

position:715203:-1
position: 715203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724172:-1
position: 724172
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715203-724172:-1:exon

syvn1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: syvn1
product: synoviolin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338759.1
SIO_010081: syvn1
subclass of: SO_0000673
so part of: syvn1
location: complement(join(715203..715381,715588..715680,718937..719026,719178..719335,719455..719571,720040..720105,720462..720561,720713..720839,721333..721436,723772..723820,723957..>724172))
location: region:715203-724172:-1
so has part: feature:723957-724172:-1:exon
so has part: feature:723772-723820:-1:exon
so has part: feature:721333-721436:-1:exon
so has part: feature:720713-720839:-1:exon
so has part: feature:720462-720561:-1:exon
so has part: feature:720040-720105:-1:exon
so has part: feature:719455-719571:-1:exon
so has part: feature:719178-719335:-1:exon
so has part: feature:718937-719026:-1:exon
so has part: feature:715588-715680:-1:exon
so has part: feature:715203-715381:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:723957-724172:-1:exon

position:723957:-1
position: 723957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:723772-723820:-1:exon

position:723772:-1
position: 723772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723820:-1
position: 723820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:721333-721436:-1:exon

position:721333:-1
position: 721333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721436:-1
position: 721436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:720713-720839:-1:exon

position:720713:-1
position: 720713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720839:-1
position: 720839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:720462-720561:-1:exon

position:720462:-1
position: 720462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720561:-1
position: 720561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:720040-720105:-1:exon

position:720040:-1
position: 720040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720105:-1
position: 720105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:719455-719571:-1:exon

position:719455:-1
position: 719455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719571:-1
position: 719571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:719178-719335:-1:exon

position:719178:-1
position: 719178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719335:-1
position: 719335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:718937-719026:-1:exon

position:718937:-1
position: 718937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719026:-1
position: 719026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:715588-715680:-1:exon

position:715588:-1
position: 715588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715680:-1
position: 715680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:715203-715381:-1:exon

position:715381:-1
position: 715381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

syvn1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: syvn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase synoviolin
translation: PGRQCRNPAGQSVSRSVSLFQHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHFRVLSLMVLLGILDFLFVSHACHSIITRGASVQLVFGFEYAILLTMVLTTFIKYALHTADLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTFPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQATDNVCIICREEMVTGAKRLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASLPNQTPAPPPAQPPAPPPAANPAGVAPGNVPPGMMPPFPPAMFPFWGPFPAAPPPAGPPPPGPGEPQSAPMWPQENPKWIREDGGGLGQWAENRKQPPGGERGAIQRGAVWSKTPIIWVSRQSCTVQTAAIAPSGSELQGRTHLLGLDR
SIO_010081: syvn1
subclass of: SO_0000673
so part of: syvn1
location: complement(join(715203..715381,715588..715680,718937..719026,719178..719335,719455..719571,720040..720105,720462..720561,720713..720839,721333..721436,723772..723820,723957..>724172))
location: region:715203-724172:-1
so has part: feature:723957-724172:-1:exon
so has part: feature:723772-723820:-1:exon
so has part: feature:721333-721436:-1:exon
so has part: feature:720713-720839:-1:exon
so has part: feature:720462-720561:-1:exon
so has part: feature:720040-720105:-1:exon
so has part: feature:719455-719571:-1:exon
so has part: feature:719178-719335:-1:exon
so has part: feature:718937-719026:-1:exon
so has part: feature:715588-715680:-1:exon
so has part: feature:715203-715381:-1:exon

XP_015194245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:723957-724172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723772-723820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:721333-721436:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:720713-720839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:720462-720561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:720040-720105:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:719455-719571:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:719178-719335:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:718937-719026:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:715588-715680:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:715203-715381:-1:exon

LOC107075860
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 735270..736270
location: region:735270-736270:1
so has part: feature:735270-736270:1:exon
subclass of: SO_0000011

107075860
type: Gene
SIO_000068: ncbigene

position:735270:1
position: 735270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736270:1
position: 736270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735270-736270:1:exon

LOC107075860
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075860
product: uncharacterized LOC107075860
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_001477355.1
SIO_010081: LOC107075860
subclass of: SO_0000673
so part of: LOC107075860
location: join(735270..735699,735745..736270)
location: region:735270-736270:1
so has part: feature:735270-735699:1:exon
so has part: feature:735745-736270:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:735270-735699:1:exon

position:735699:1
position: 735699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:735745-736270:1:exon

position:735745:1
position: 735745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107075847
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(753073..755367)
location: region:753073-755367:-1
so has part: feature:753073-755367:-1:exon
subclass of: SO_0000010

107075847
type: Gene
SIO_000068: ncbigene

position:753073:-1
position: 753073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755367:-1
position: 755367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753073-755367:-1:exon

LOC107075847
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107075847
product: solute carrier family 22 member 6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338760.1
SIO_010081: LOC107075847
subclass of: SO_0000673
so part of: LOC107075847
location: complement(join(753073..753166,753578..753655,753934..754042,754764..754978,755356..755367))
location: region:753073-755367:-1
so has part: feature:755356-755367:-1:exon
so has part: feature:754764-754978:-1:exon
so has part: feature:753934-754042:-1:exon
so has part: feature:753578-753655:-1:exon
so has part: feature:753073-753166:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:755356-755367:-1:exon

position:755356:-1
position: 755356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:754764-754978:-1:exon

position:754764:-1
position: 754764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754978:-1
position: 754978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:753934-754042:-1:exon

position:753934:-1
position: 753934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754042:-1
position: 754042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:753578-753655:-1:exon

position:753578:-1
position: 753578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753655:-1
position: 753655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:753073-753166:-1:exon

position:753166:-1
position: 753166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107075847
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107075847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 22 member 6-like
translation: MDLQKFGVGIYLIQVIFGAVDIPAKLLIMATMSTLGRRPSLSGALTFAGTAVLANLLVPHDLQTLRTCLAVLGKGCLAASFQCCYLYSAELYPTVIRQNGMGWVSMMARLGAMVAPLVQLLGEAQGQKAAKAPPKKEELVLKEVKHSLLKEAI
SIO_010081: LOC107075847
subclass of: SO_0000673
so part of: LOC107075847
location: complement(join(753073..753166,753578..753655,753934..754042,754764..754944))
location: region:753073-754944:-1
so has part: feature:754764-754944:-1:exon
so has part: feature:753934-754042:-1:exon
so has part: feature:753578-753655:-1:exon
so has part: feature:753073-753166:-1:exon

XP_015194246.1
type: Protein
SIO_000068: ncbiprotein

position:754944:-1
position: 754944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754764-754944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:753934-754042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:753578-753655:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:753073-753166:-1:exon

LOC102685634
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102685634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(769928..784228)
location: region:769928-784228:-1
so has part: feature:769928-784228:-1:exon
subclass of: SO_0000010

102685634
type: Gene
SIO_000068: ncbigene

position:769928:-1
position: 769928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784228:-1
position: 784228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:769928-784228:-1:exon

LOC102685634
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102685634
product: calpain-1 catalytic subunit-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015338805.1
SIO_010081: LOC102685634
subclass of: SO_0000673
so part of: LOC102685634
location: complement(join(769928..770019,770441..770524,772162..772330,772674..772807,775046..775164,775815..775884,776403..776672,784054..784228))
location: region:769928-784228:-1
so has part: feature:784054-784228:-1:exon
so has part: feature:776403-776672:-1:exon
so has part: feature:775815-775884:-1:exon
so has part: feature:775046-775164:-1:exon
so has part: feature:772674-772807:-1:exon
so has part: feature:772162-772330:-1:exon
so has part: feature:770441-770524:-1:exon
so has part: feature:769928-770019:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:784054-784228:-1:exon

position:784054:-1
position: 784054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:776403-776672:-1:exon

position:776403:-1
position: 776403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776672:-1
position: 776672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:775815-775884:-1:exon

position:775815:-1
position: 775815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775884:-1
position: 775884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:775046-775164:-1:exon

position:775046:-1
position: 775046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775164:-1
position: 775164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:772674-772807:-1:exon

position:772674:-1
position: 772674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772807:-1
position: 772807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:772162-772330:-1:exon

position:772162:-1
position: 772162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772330:-1
position: 772330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:770441-770524:-1:exon

position:770441:-1
position: 770441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770524:-1
position: 770524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:769928-770019:-1:exon

position:770019:-1
position: 770019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102685634
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102685634
product: calpain-1 catalytic subunit-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015338804.1
SIO_010081: LOC102685634
subclass of: SO_0000673
so part of: LOC102685634
location: complement(join(769928..770019,770441..770524,772162..772330,772674..772807,775046..775164,775815..775884,776403..776776,784054..784228))
location: region:769928-784228:-1
so has part: feature:784054-784228:-1:exon
so has part: feature:776403-776776:-1:exon
so has part: feature:775815-775884:-1:exon
so has part: feature:775046-775164:-1:exon
so has part: feature:772674-772807:-1:exon
so has part: feature:772162-772330:-1:exon
so has part: feature:770441-770524:-1:exon
so has part: feature:769928-770019:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:784054-784228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:776403-776776:-1:exon

position:776776:-1
position: 776776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:775815-775884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775046-775164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:772674-772807:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:772162-772330:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:770441-770524:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:769928-770019:-1:exon

LOC102685634
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102685634
product: calpain-1 catalytic subunit-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015338803.1
SIO_010081: LOC102685634
subclass of: SO_0000673
so part of: LOC102685634
location: complement(join(769928..770019,770441..770524,772162..772330,772674..772807,775046..775164,775815..775884,776403..777195,784054..784228))
location: region:769928-784228:-1
so has part: feature:784054-784228:-1:exon
so has part: feature:776403-777195:-1:exon
so has part: feature:775815-775884:-1:exon
so has part: feature:775046-775164:-1:exon
so has part: feature:772674-772807:-1:exon
so has part: feature:772162-772330:-1:exon
so has part: feature:770441-770524:-1:exon
so has part: feature:769928-770019:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:784054-784228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:776403-777195:-1:exon

position:777195:-1
position: 777195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:775815-775884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775046-775164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:772674-772807:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:772162-772330:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:770441-770524:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:769928-770019:-1:exon

LOC102685634
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102685634
product: calpain-1 catalytic subunit-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015338802.1
SIO_010081: LOC102685634
subclass of: SO_0000673
so part of: LOC102685634
location: complement(join(769928..770019,770441..770524,771024..771173,772312..772330,772674..772807,775046..775164,775815..775884,776403..777198,784054..784228))
location: region:769928-784228:-1
so has part: feature:784054-784228:-1:exon
so has part: feature:776403-777198:-1:exon
so has part: feature:775815-775884:-1:exon
so has part: feature:775046-775164:-1:exon
so has part: feature:772674-772807:-1:exon
so has part: feature:772312-772330:-1:exon
so has part: feature:771024-771173:-1:exon
so has part: feature:770441-770524:-1:exon
so has part: feature:769928-770019:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:784054-784228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:776403-777198:-1:exon

position:777198:-1
position: 777198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:775815-775884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775046-775164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:772674-772807:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:772312-772330:-1:exon

position:772312:-1
position: 772312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:771024-771173:-1:exon

position:771024:-1
position: 771024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771173:-1
position: 771173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:770441-770524:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:769928-770019:-1:exon

LOC102685634
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102685634
product: calpain-1 catalytic subunit-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015338800.1
SIO_010081: LOC102685634
subclass of: SO_0000673
so part of: LOC102685634
location: complement(join(769928..770019,770441..770524,772162..772330,772674..772807,775046..775164,775815..775884,776403..777198,784054..784228))
location: region:769928-784228:-1
so has part: feature:784054-784228:-1:exon
so has part: feature:776403-777198:-1:exon
so has part: feature:775815-775884:-1:exon
so has part: feature:775046-775164:-1:exon
so has part: feature:772674-772807:-1:exon
so has part: feature:772162-772330:-1:exon
so has part: feature:770441-770524:-1:exon
so has part: feature:769928-770019:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:784054-784228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:776403-777198:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:775815-775884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775046-775164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:772674-772807:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:772162-772330:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:770441-770524:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:769928-770019:-1:exon

LOC102685634
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102685634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calpain-1 catalytic subunit-like isoform X2
translation: MAVVEQVFASGMAARLRSQWDREGGLGQHHQAVKYLGQDYETLRDHCLQNRTLFKDDAFPAEPSSLGFKELGPRSGKTQGVRWLRPGDICSNPQFIVGGATRTDICQGALGDCWLLAAIASLTLNDTVLHRVVPHGQSFQSQYAGIFHFQFWQFGEWVDVVIDDRLPARDGKLLFVHSAEGNEFWSALLEKAYAKVNGCYEALSGGSTSEGFEDFTGGVTEMYELRKPPSDLFTIVSKAVERGSLLGCSIDITSNLDMEAVTFKKLVKGHAYSVTGVEEVVCRGLPTKLVRIRNPWGEVEWTGAWSDK
SIO_010081: LOC102685634
subclass of: SO_0000673
so part of: LOC102685634
location: complement(join(769930..770019,770441..770524,771024..771173,772312..772330,772674..772807,775046..775164,775815..775884,776403..776663))
location: region:769930-776663:-1
so has part: feature:776403-776663:-1:exon
so has part: feature:775815-775884:-1:exon
so has part: feature:775046-775164:-1:exon
so has part: feature:772674-772807:-1:exon
so has part: feature:772312-772330:-1:exon
so has part: feature:771024-771173:-1:exon
so has part: feature:770441-770524:-1:exon
so has part: feature:769930-770019:-1:exon

XP_015194288.1
type: Protein
SIO_000068: ncbiprotein

position:769930:-1
position: 769930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776663:-1
position: 776663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:776403-776663:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775815-775884:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:775046-775164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:772674-772807:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:772312-772330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:771024-771173:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:770441-770524:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:769930-770019:-1:exon

LOC102685634
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102685634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calpain-1 catalytic subunit-like isoform X1
translation: MAVVEQVFASGMAARLRSQWDREGGLGQHHQAVKYLGQDYETLRDHCLQNRTLFKDDAFPAEPSSLGFKELGPRSGKTQGVRWLRPGDICSNPQFIVGGATRTDICQGALGDCWLLAAIASLTLNDTVLHRVVPHGQSFQSQYAGIFHFQFWQFGEWVDVVIDDRLPARDGKLLFVHSAEGNEFWSALLEKAYAKVNGCYEALSGGSTSEGFEDFTGGVTEMYELRKPPSDLFTIVSKAVERGSLLGCSIDITSNLDMEAVTFKKLVKGHAYSVTGVEEVVCRGLPTKLVRIRNPWGEVEWTGAWSDK
SIO_010081: LOC102685634
subclass of: SO_0000673
so part of: LOC102685634
location: complement(join(769930..770019,770441..770524,772162..772330,772674..772807,775046..775164,775815..775884,776403..776663))
location: region:769930-776663:-1
so has part: feature:776403-776663:-1:exon
so has part: feature:775815-775884:-1:exon
so has part: feature:775046-775164:-1:exon
so has part: feature:772674-772807:-1:exon
so has part: feature:772162-772330:-1:exon
so has part: feature:770441-770524:-1:exon
so has part: feature:769930-770019:-1:exon

XP_015194286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:776403-776663:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775815-775884:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:775046-775164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:772674-772807:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:772162-772330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:770441-770524:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:769930-770019:-1:exon

LOC102685634
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102685634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calpain-1 catalytic subunit-like isoform X1
translation: MAVVEQVFASGMAARLRSQWDREGGLGQHHQAVKYLGQDYETLRDHCLQNRTLFKDDAFPAEPSSLGFKELGPRSGKTQGVRWLRPGDICSNPQFIVGGATRTDICQGALGDCWLLAAIASLTLNDTVLHRVVPHGQSFQSQYAGIFHFQFWQFGEWVDVVIDDRLPARDGKLLFVHSAEGNEFWSALLEKAYAKVNGCYEALSGGSTSEGFEDFTGGVTEMYELRKPPSDLFTIVSKAVERGSLLGCSIDITSNLDMEAVTFKKLVKGHAYSVTGVEEVVCRGLPTKLVRIRNPWGEVEWTGAWSDK
SIO_010081: LOC102685634
subclass of: SO_0000673
so part of: LOC102685634
location: complement(join(769930..770019,770441..770524,772162..772330,772674..772807,775046..775164,775815..775884,776403..776663))
location: region:769930-776663:-1
so has part: feature:776403-776663:-1:exon
so has part: feature:775815-775884:-1:exon
so has part: feature:775046-775164:-1:exon
so has part: feature:772674-772807:-1:exon
so has part: feature:772162-772330:-1:exon
so has part: feature:770441-770524:-1:exon
so has part: feature:769930-770019:-1:exon

XP_015194289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:776403-776663:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775815-775884:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:775046-775164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:772674-772807:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:772162-772330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:770441-770524:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:769930-770019:-1:exon

LOC102685634
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102685634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calpain-1 catalytic subunit-like isoform X1
translation: MAVVEQVFASGMAARLRSQWDREGGLGQHHQAVKYLGQDYETLRDHCLQNRTLFKDDAFPAEPSSLGFKELGPRSGKTQGVRWLRPGDICSNPQFIVGGATRTDICQGALGDCWLLAAIASLTLNDTVLHRVVPHGQSFQSQYAGIFHFQFWQFGEWVDVVIDDRLPARDGKLLFVHSAEGNEFWSALLEKAYAKVNGCYEALSGGSTSEGFEDFTGGVTEMYELRKPPSDLFTIVSKAVERGSLLGCSIDITSNLDMEAVTFKKLVKGHAYSVTGVEEVVCRGLPTKLVRIRNPWGEVEWTGAWSDK
SIO_010081: LOC102685634
subclass of: SO_0000673
so part of: LOC102685634
location: complement(join(769930..770019,770441..770524,772162..772330,772674..772807,775046..775164,775815..775884,776403..776663))
location: region:769930-776663:-1
so has part: feature:776403-776663:-1:exon
so has part: feature:775815-775884:-1:exon
so has part: feature:775046-775164:-1:exon
so has part: feature:772674-772807:-1:exon
so has part: feature:772162-772330:-1:exon
so has part: feature:770441-770524:-1:exon
so has part: feature:769930-770019:-1:exon

XP_015194290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:776403-776663:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775815-775884:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:775046-775164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:772674-772807:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:772162-772330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:770441-770524:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:769930-770019:-1:exon

LOC102685634
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102685634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calpain-1 catalytic subunit-like isoform X1
translation: MAVVEQVFASGMAARLRSQWDREGGLGQHHQAVKYLGQDYETLRDHCLQNRTLFKDDAFPAEPSSLGFKELGPRSGKTQGVRWLRPGDICSNPQFIVGGATRTDICQGALGDCWLLAAIASLTLNDTVLHRVVPHGQSFQSQYAGIFHFQFWQFGEWVDVVIDDRLPARDGKLLFVHSAEGNEFWSALLEKAYAKVNGCYEALSGGSTSEGFEDFTGGVTEMYELRKPPSDLFTIVSKAVERGSLLGCSIDITSNLDMEAVTFKKLVKGHAYSVTGVEEVVCRGLPTKLVRIRNPWGEVEWTGAWSDK
SIO_010081: LOC102685634
subclass of: SO_0000673
so part of: LOC102685634
location: complement(join(769930..770019,770441..770524,772162..772330,772674..772807,775046..775164,775815..775884,776403..776663))
location: region:769930-776663:-1
so has part: feature:776403-776663:-1:exon
so has part: feature:775815-775884:-1:exon
so has part: feature:775046-775164:-1:exon
so has part: feature:772674-772807:-1:exon
so has part: feature:772162-772330:-1:exon
so has part: feature:770441-770524:-1:exon
so has part: feature:769930-770019:-1:exon

XP_015194291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:776403-776663:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775815-775884:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:775046-775164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:772674-772807:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:772162-772330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:770441-770524:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:769930-770019:-1:exon

LOC107075862
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075862
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(801241..803259)
location: region:801241-803259:-1
so has part: feature:801241-803259:-1:exon
subclass of: SO_0000011

107075862
type: Gene
SIO_000068: ncbigene

position:801241:-1
position: 801241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803259:-1
position: 803259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:801241-803259:-1:exon

LOC107075862
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075862
product: uncharacterized LOC107075862
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_001477357.1
SIO_010081: LOC107075862
subclass of: SO_0000673
so part of: LOC107075862
location: complement(join(801241..801329,802483..802551,803129..803259))
location: region:801241-803259:-1
so has part: feature:803129-803259:-1:exon
so has part: feature:802483-802551:-1:exon
so has part: feature:801241-801329:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:803129-803259:-1:exon

position:803129:-1
position: 803129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:802483-802551:-1:exon

position:802483:-1
position: 802483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802551:-1
position: 802551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:801241-801329:-1:exon

position:801329:-1
position: 801329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107075861
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075861
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(807972..808960)
location: region:807972-808960:-1
so has part: feature:807972-808960:-1:exon
subclass of: SO_0000011

107075861
type: Gene
SIO_000068: ncbigene

position:807972:-1
position: 807972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808960:-1
position: 808960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807972-808960:-1:exon

LOC107075861
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075861
product: uncharacterized LOC107075861
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_001477356.1
SIO_010081: LOC107075861
subclass of: SO_0000673
so part of: LOC107075861
location: complement(join(807972..808520,808884..808960))
location: region:807972-808960:-1
so has part: feature:808884-808960:-1:exon
so has part: feature:807972-808520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:808884-808960:-1:exon

position:808884:-1
position: 808884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:807972-808520:-1:exon

position:808520:-1
position: 808520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

klc2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: klc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<812218..818972)
location: region:812218-818972:-1
so has part: feature:812218-818972:-1:exon
subclass of: SO_0000010

102685837
type: Gene
SIO_000068: ncbigene

position:812218:-1
position: 812218
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:818972:-1
position: 818972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812218-818972:-1:exon

klc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: klc2
product: kinesin light chain 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338761.1
SIO_010081: klc2
subclass of: SO_0000673
so part of: klc2
location: complement(join(<812218..812316,812528..812701,813270..813459,814000..814042,814954..815026,815410..815640,816418..816688,818248..818972))
location: region:812218-818972:-1
so has part: feature:818248-818972:-1:exon
so has part: feature:816418-816688:-1:exon
so has part: feature:815410-815640:-1:exon
so has part: feature:814954-815026:-1:exon
so has part: feature:814000-814042:-1:exon
so has part: feature:813270-813459:-1:exon
so has part: feature:812528-812701:-1:exon
so has part: feature:812218-812316:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:818248-818972:-1:exon

position:818248:-1
position: 818248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:816418-816688:-1:exon

position:816418:-1
position: 816418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816688:-1
position: 816688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:815410-815640:-1:exon

position:815410:-1
position: 815410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815640:-1
position: 815640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:814954-815026:-1:exon

position:814954:-1
position: 814954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815026:-1
position: 815026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:814000-814042:-1:exon

position:814000:-1
position: 814000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814042:-1
position: 814042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:813270-813459:-1:exon

position:813270:-1
position: 813270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813459:-1
position: 813459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:812528-812701:-1:exon

position:812528:-1
position: 812528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812701:-1
position: 812701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:812218-812316:-1:exon

position:812316:-1
position: 812316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

klc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: klc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin light chain 2
translation: MSAMVLPRDEPLERLSQDEIVLSTKAVMQGLETLRSEHAALLAALLDGVALPDGSQLPAAQEKSGLLRKSLDAIELGLGEAQVLIALSSHLSAVEAEKQKLRAQVRRLCQENQWLRDELAGTQQRLQRSEQSVAQLEEEKKHLEFMNQIRKFDDDVSPSDEKTSEAPKDSLDDLFPNDDDQGSEPPAPQLNTLALVCRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYREAEPLCKRALEIREKVLGKYHPDVAKQLNNLALLCQNQGKYQEVEYYYQRALEIYQAKLGADDPNVAKTKNNLATCYLKQGKFKDAECLYKEILTRAHEKEFGSVN
SIO_010081: klc2
subclass of: SO_0000673
so part of: klc2
location: complement(join(<812218..812316,812528..812701,813270..813459,814000..814042,814954..815026,815410..815640,816418..816663))
location: region:812218-816663:-1
so has part: feature:816418-816663:-1:exon
so has part: feature:815410-815640:-1:exon
so has part: feature:814954-815026:-1:exon
so has part: feature:814000-814042:-1:exon
so has part: feature:813270-813459:-1:exon
so has part: feature:812528-812701:-1:exon
so has part: feature:812218-812316:-1:exon

XP_015194247.1
type: Protein
SIO_000068: ncbiprotein

position:816663:-1
position: 816663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:816418-816663:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815410-815640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:814954-815026:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:814000-814042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:813270-813459:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:812528-812701:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:812218-812316:-1:exon

pacs1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: pacs1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(820572..840294)
location: region:820572-840294:-1
so has part: feature:820572-840294:-1:exon
subclass of: SO_0000010

102686040
type: Gene
SIO_000068: ncbigene

position:820572:-1
position: 820572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840294:-1
position: 840294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:820572-840294:-1:exon

pacs1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: pacs1
product: phosphofurin acidic cluster sorting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338762.1
SIO_010081: pacs1
subclass of: SO_0000673
so part of: pacs1
location: complement(join(820572..822041,822501..822620,823638..823873,824104..824251,824451..824493,824580..824650,826502..826818,826994..827100,827223..827327,827783..827915,827995..828017,830317..830568,832728..832747,832834..832936,833401..833492,833616..833760,833979..834104,835116..835205,835294..835381,839760..840294))
location: region:820572-840294:-1
so has part: feature:839760-840294:-1:exon
so has part: feature:835294-835381:-1:exon
so has part: feature:835116-835205:-1:exon
so has part: feature:833979-834104:-1:exon
so has part: feature:833616-833760:-1:exon
so has part: feature:833401-833492:-1:exon
so has part: feature:832834-832936:-1:exon
so has part: feature:832728-832747:-1:exon
so has part: feature:830317-830568:-1:exon
so has part: feature:827995-828017:-1:exon
so has part: feature:827783-827915:-1:exon
so has part: feature:827223-827327:-1:exon
so has part: feature:826994-827100:-1:exon
so has part: feature:826502-826818:-1:exon
so has part: feature:824580-824650:-1:exon
so has part: feature:824451-824493:-1:exon
so has part: feature:824104-824251:-1:exon
so has part: feature:823638-823873:-1:exon
so has part: feature:822501-822620:-1:exon
so has part: feature:820572-822041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:839760-840294:-1:exon

position:839760:-1
position: 839760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:835294-835381:-1:exon

position:835294:-1
position: 835294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835381:-1
position: 835381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:835116-835205:-1:exon

position:835116:-1
position: 835116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835205:-1
position: 835205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:833979-834104:-1:exon

position:833979:-1
position: 833979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834104:-1
position: 834104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:833616-833760:-1:exon

position:833616:-1
position: 833616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833760:-1
position: 833760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:833401-833492:-1:exon

position:833401:-1
position: 833401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833492:-1
position: 833492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:832834-832936:-1:exon

position:832834:-1
position: 832834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832936:-1
position: 832936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:832728-832747:-1:exon

position:832728:-1
position: 832728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832747:-1
position: 832747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:830317-830568:-1:exon

position:830317:-1
position: 830317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830568:-1
position: 830568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:827995-828017:-1:exon

position:827995:-1
position: 827995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828017:-1
position: 828017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:827783-827915:-1:exon

position:827783:-1
position: 827783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827915:-1
position: 827915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:827223-827327:-1:exon

position:827223:-1
position: 827223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827327:-1
position: 827327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:826994-827100:-1:exon

position:826994:-1
position: 826994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827100:-1
position: 827100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:826502-826818:-1:exon

position:826502:-1
position: 826502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826818:-1
position: 826818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:824580-824650:-1:exon

position:824580:-1
position: 824580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824650:-1
position: 824650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:824451-824493:-1:exon

position:824451:-1
position: 824451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824493:-1
position: 824493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:824104-824251:-1:exon

position:824104:-1
position: 824104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824251:-1
position: 824251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:823638-823873:-1:exon

position:823638:-1
position: 823638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823873:-1
position: 823873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:822501-822620:-1:exon

position:822501:-1
position: 822501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822620:-1
position: 822620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:820572-822041:-1:exon

position:822041:-1
position: 822041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pacs1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: pacs1
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(826524..826526),aa:OTHER)
product: LOW QUALITY PROTEIN: phosphofurin acidic cluster sorting protein 1
translation: MSERGGGGGSGGGGGGGGLPRAGGAPSPHLQPPKPVTIASARPVQMNLYATWEVDRSLPSCVPRLFNLTLKKLVMLKELDKDLTSVVIAVKLQGSKRILRSNEILLSAAGLTETDLQLSFSLQYPHFLKRDANKLQIMLQRRKRYKNRTILGYKTLALGLINMAEVMQHPSEGAQVLGLHSNVKDAAVPVAEIRIYSLSSQPIDHEGPKAKLSDRSPDIDNYSEDEEESFSSEQEGSDDPAHGQYLFDEDYEVGKMKKSRRKLTSTASITRVNVSLAAWHRESDPVGFGLEHVSREQIQEVEEDLDELYDSLYNPSDSGPEMEETESILSTPKPKLRSAQLVPCQGGVGLGSGEGAWPVHRLGRGSGGGTQSTPSPRLDGGHTPRQRRSTPFRDRQQSKPLSERTNSSDSERSPELSHSTQVPRKVVYDQLNQILVSDTALPENLILVNITDWQGQFVADLLHAQKLPVVCTCSGAEIQAVLSAVLTRIQKFCNCNSSMPRPVKVAAVGGQSYLGSILRFFVTQLANKTSDWLNHMRFLVVPLGKVPAGRGRAGGAGVPGRNLGEVTRRVQPRDLKGAVKRVDATPRISXKSELLDVDCSNPPSLSRHDEDSYQKFIPFIGVVKVGLIEPSPASAGADADEGGATSLAVPSTSPPSHGSGVGLVKEAAATPPPSPSMSSGLAVLGSPSMPHGVDAIGLQVDYWVALGGERKKEGERRDTGSKNTLKSTFRSVQVSRLPGAAGEGPPGLNTMSMTVVTKEKNKKVPTIFLGKKPKEKEVDSKSQVIEGISRLICSAKQQQTILRVSIDGVEWNDVKFFQLAAQWPTHVKYFPVGLFSYSKPAS
SIO_010081: pacs1
subclass of: SO_0000673
so part of: pacs1
location: complement(join(821923..822041,822501..822620,823638..823873,824104..824251,824451..824493,824580..824650,826502..826818,826994..827100,827223..827327,827783..827915,827995..828017,830317..830568,832728..832747,832834..832936,833401..833492,833616..833760,833979..834104,835116..835205,835294..835381,839760..839950))
location: region:821923-839950:-1
so has part: feature:839760-839950:-1:exon
so has part: feature:835294-835381:-1:exon
so has part: feature:835116-835205:-1:exon
so has part: feature:833979-834104:-1:exon
so has part: feature:833616-833760:-1:exon
so has part: feature:833401-833492:-1:exon
so has part: feature:832834-832936:-1:exon
so has part: feature:832728-832747:-1:exon
so has part: feature:830317-830568:-1:exon
so has part: feature:827995-828017:-1:exon
so has part: feature:827783-827915:-1:exon
so has part: feature:827223-827327:-1:exon
so has part: feature:826994-827100:-1:exon
so has part: feature:826502-826818:-1:exon
so has part: feature:824580-824650:-1:exon
so has part: feature:824451-824493:-1:exon
so has part: feature:824104-824251:-1:exon
so has part: feature:823638-823873:-1:exon
so has part: feature:822501-822620:-1:exon
so has part: feature:821923-822041:-1:exon

XP_015194248.1
type: Protein
SIO_000068: ncbiprotein

position:821923:-1
position: 821923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839950:-1
position: 839950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:839760-839950:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:835294-835381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835116-835205:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833979-834104:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:833616-833760:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833401-833492:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:832834-832936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:832728-832747:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830317-830568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:827995-828017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:827783-827915:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:827223-827327:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:826994-827100:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:826502-826818:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:824580-824650:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:824451-824493:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:824104-824251:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:823638-823873:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:822501-822620:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:821923-822041:-1:exon

zdhhc24
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: zdhhc24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 864398..869278
location: region:864398-869278:1
so has part: feature:864398-869278:1:exon
subclass of: SO_0000010

102686451
type: Gene
SIO_000068: ncbigene

position:864398:1
position: 864398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869278:1
position: 869278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864398-869278:1:exon

zdhhc24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: zdhhc24
product: zinc finger, DHHC-type containing 24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_006642801.2
SIO_010081: zdhhc24
subclass of: SO_0000673
so part of: zdhhc24
location: join(864398..866344,866698..866960,867944..869278)
location: region:864398-869278:1
so has part: feature:864398-866344:1:exon
so has part: feature:866698-866960:1:exon
so has part: feature:867944-869278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:864398-866344:1:exon

position:866344:1
position: 866344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:866698-866960:1:exon

position:866698:1
position: 866698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866960:1
position: 866960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:867944-869278:1:exon

position:867944:1
position: 867944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

zdhhc24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: zdhhc24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable palmitoyltransferase ZDHHC24
translation: MRSFCYRTWGRLERACRRLPVVVNTLLVLSITAEVSYLVLAEAPGRAGWTAPWKAAHLGAQAFMLGNIAWNSVLFLRTDPSVRGVFLGGEGMGQGWRYCYSCETHTPPRCSHCHDCGVCVLRRDHHCVFFGQCVGFRNYRYFLSSLLFMWAGLLYAVVLNTEVFLLVLSEGLTLHSALLLLAPWAFLFFHAALMLRGQTTREWYSSRRPYSLGWRRNLQECLGRRWYLAWLCPLIPSPLPGDGIHFRVTGPLDPAGN
SIO_010081: zdhhc24
subclass of: SO_0000673
so part of: zdhhc24
location: join(866055..866344,866698..866960,867944..868164)
location: region:866055-868164:1
so has part: feature:866055-866344:1:exon
so has part: feature:866698-866960:1:exon
so has part: feature:867944-868164:1:exon

XP_006642864.1
type: Protein
SIO_000068: ncbiprotein

position:866055:1
position: 866055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868164:1
position: 868164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:866055-866344:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:866698-866960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:867944-868164:1:exon

catsper1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: catsper1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(868701..877252)
location: region:868701-877252:-1
so has part: feature:868701-877252:-1:exon
subclass of: SO_0000010

107075851
type: Gene
SIO_000068: ncbigene

position:868701:-1
position: 868701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877252:-1
position: 877252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:868701-877252:-1:exon

catsper1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: catsper1
product: cation channel, sperm associated 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338795.1
SIO_010081: catsper1
subclass of: SO_0000673
so part of: catsper1
location: complement(join(868701..868793,869923..870037,870546..870630,870752..870803,871522..871594,871729..871792,872732..872875,873219..873310,873858..874017,874567..874680,874760..874969,875559..875699,876642..876927,877000..877252))
location: region:868701-877252:-1
so has part: feature:877000-877252:-1:exon
so has part: feature:876642-876927:-1:exon
so has part: feature:875559-875699:-1:exon
so has part: feature:874760-874969:-1:exon
so has part: feature:874567-874680:-1:exon
so has part: feature:873858-874017:-1:exon
so has part: feature:873219-873310:-1:exon
so has part: feature:872732-872875:-1:exon
so has part: feature:871729-871792:-1:exon
so has part: feature:871522-871594:-1:exon
so has part: feature:870752-870803:-1:exon
so has part: feature:870546-870630:-1:exon
so has part: feature:869923-870037:-1:exon
so has part: feature:868701-868793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:877000-877252:-1:exon

position:877000:-1
position: 877000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:876642-876927:-1:exon

position:876642:-1
position: 876642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876927:-1
position: 876927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:875559-875699:-1:exon

position:875559:-1
position: 875559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875699:-1
position: 875699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:874760-874969:-1:exon

position:874760:-1
position: 874760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874969:-1
position: 874969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:874567-874680:-1:exon

position:874567:-1
position: 874567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874680:-1
position: 874680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:873858-874017:-1:exon

position:873858:-1
position: 873858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874017:-1
position: 874017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:873219-873310:-1:exon

position:873219:-1
position: 873219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873310:-1
position: 873310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:872732-872875:-1:exon

position:872732:-1
position: 872732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872875:-1
position: 872875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:871729-871792:-1:exon

position:871729:-1
position: 871729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871792:-1
position: 871792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:871522-871594:-1:exon

position:871522:-1
position: 871522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871594:-1
position: 871594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:870752-870803:-1:exon

position:870752:-1
position: 870752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870803:-1
position: 870803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:870546-870630:-1:exon

position:870546:-1
position: 870546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870630:-1
position: 870630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:869923-870037:-1:exon

position:869923:-1
position: 869923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870037:-1
position: 870037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:868701-868793:-1:exon

position:868793:-1
position: 868793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

catsper1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: catsper1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cation channel sperm-associated protein 1
translation: MDLPVAPGERRGGTAVQERPSGQTLHPRQRQPNLASLRDTERHHLPVLPVASPGGRRQARERIFSTCEVPEAVIQQLIRSSERDRRQRALQARRSCLGRAWGALLDRCRLLYQIVFAFTESRPLDNFLLAVVVLNTGALVAQTFDSVAVRGGWFFSAMDASFLSIYLMEFALKVFVWGRVYFRNAWNILDFVIVFMSLVDFVLPLIQSTSSFSSGNASTVFRILRIFKGIRAIRAFRVLRTIRFLQNLQAIMSTCLQSLQSMGAIIVLMFTFLFMFAVIFREMFSVSDPDRFGSMFKTIFTLFQLLTLDDWAYIYSTSRDQGYPYIIIFLVLYIVVEYFTFLNLFIAVLVDNFQLAIKRRMERKKDKSCTLDDSEDDTAALKKKGQPSGEQDNETFLQRAIQQNYSQNKFSKREVQLMTSYFRLLAAIDLQHHAFRSQGATLDRVVDTFFEAAEEEEEECHRQEKD
SIO_010081: catsper1
subclass of: SO_0000673
so part of: catsper1
location: complement(join(868746..868793,869923..870037,870546..870630,870752..870803,871522..871594,871729..871792,872732..872875,873219..873310,873858..874017,874567..874680,874760..874969,875559..875699,876642..876744))
location: region:868746-876744:-1
so has part: feature:876642-876744:-1:exon
so has part: feature:875559-875699:-1:exon
so has part: feature:874760-874969:-1:exon
so has part: feature:874567-874680:-1:exon
so has part: feature:873858-874017:-1:exon
so has part: feature:873219-873310:-1:exon
so has part: feature:872732-872875:-1:exon
so has part: feature:871729-871792:-1:exon
so has part: feature:871522-871594:-1:exon
so has part: feature:870752-870803:-1:exon
so has part: feature:870546-870630:-1:exon
so has part: feature:869923-870037:-1:exon
so has part: feature:868746-868793:-1:exon

XP_015194281.1
type: Protein
SIO_000068: ncbiprotein

position:868746:-1
position: 868746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876744:-1
position: 876744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:876642-876744:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875559-875699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:874760-874969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:874567-874680:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873858-874017:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:873219-873310:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:872732-872875:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:871729-871792:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:871522-871594:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:870752-870803:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:870546-870630:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:869923-870037:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:868746-868793:-1:exon

LOC102686652
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102686652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <881842..>892191
location: region:881842-892191:1
so has part: feature:881842-892191:1:exon
subclass of: SO_0000010

102686652
type: Gene
SIO_000068: ncbigene

position:881842:1
position: 881842
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:892191:1
position: 892191
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881842-892191:1:exon

LOC102686652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102686652
product: serine/threonine-protein kinase D3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338764.1
SIO_010081: LOC102686652
subclass of: SO_0000673
so part of: LOC102686652
location: join(<881842..882055,882433..882581,884655..885066,885842..885971,886324..886447,886646..886723,887490..887712,888089..888117,888862..888975,889826..889996,890117..890215,891035..891302,892106..>892191)
location: region:881842-892191:1
so has part: feature:881842-882055:1:exon
so has part: feature:882433-882581:1:exon
so has part: feature:884655-885066:1:exon
so has part: feature:885842-885971:1:exon
so has part: feature:886324-886447:1:exon
so has part: feature:886646-886723:1:exon
so has part: feature:887490-887712:1:exon
so has part: feature:888089-888117:1:exon
so has part: feature:888862-888975:1:exon
so has part: feature:889826-889996:1:exon
so has part: feature:890117-890215:1:exon
so has part: feature:891035-891302:1:exon
so has part: feature:892106-892191:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:881842-882055:1:exon

position:882055:1
position: 882055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:882433-882581:1:exon

position:882433:1
position: 882433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882581:1
position: 882581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:884655-885066:1:exon

position:884655:1
position: 884655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885066:1
position: 885066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:885842-885971:1:exon

position:885842:1
position: 885842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885971:1
position: 885971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:886324-886447:1:exon

position:886324:1
position: 886324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886447:1
position: 886447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:886646-886723:1:exon

position:886646:1
position: 886646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886723:1
position: 886723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:887490-887712:1:exon

position:887490:1
position: 887490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887712:1
position: 887712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:888089-888117:1:exon

position:888089:1
position: 888089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888117:1
position: 888117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:888862-888975:1:exon

position:888862:1
position: 888862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888975:1
position: 888975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:889826-889996:1:exon

position:889826:1
position: 889826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889996:1
position: 889996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:890117-890215:1:exon

position:890117:1
position: 890117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890215:1
position: 890215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:891035-891302:1:exon

position:891035:1
position: 891035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891302:1
position: 891302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:892106-892191:1:exon

position:892106:1
position: 892106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102686652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102686652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase D3-like
translation: CLSVSLCLPVALCVSVCPRVPVSPQAPDCSVAGLGEKVLLFRHEPGSENVLRRLSGGDALQEGDLIEVVLSGSASLTALKLCPHALAVHSYRTPTFCHHCGEMLWGLVRQGLKCAGRPRRSIPIVAPNPIPIVAPIPSPIPIVTPSPIPVVAPIPNPIPIPIVSPIPIIRPVPIPFLFAFPSPTPIPIPTPSPSPNPVPMAVPAVCLSAPPLPADCKLNCHRSCAPLVPSACPGEKSPPNGQGEEPQALTGPRPSWTLEADLSSNADAEEASGLTGEASEEPSFEQDPFADEEGPGPGSPISPCFSSNIPLMRLVQSVRQCKRRGSGTLREGWLLHHTCADPLRKRHYWHLDSKSITLFQNDTGTKFYKELPLSEILQVRGPGHLSVATGDAGGHSFELVTSSLTYCVSESGAAGGEALGWERAVRQALMPVHGSAQLGQDREGTGSRAEERPVDISTVYQIFADEVLGSGQFGIVYGGEPPGWDPAAPVPLFQNLHHPGVVNLEGMFETPEHIFVVMEKLHGDMLEMILSSERGRLPERTARFLVTQILEALRYLHFKNVAHCDLKPENVLLASPDPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLGAHGYNRALDMWAVGVVLYVSLSGTFPFNEDEDIGQQIRSAAFMYPENIWAHVSPEAISLISHLLQVAVKRRFSVGKALGHPWLQ
SIO_010081: LOC102686652
subclass of: SO_0000673
so part of: LOC102686652
location: join(<881842..882055,882433..882581,884655..885066,885842..885971,886324..886447,886646..886723,887490..887712,888089..888117,888862..888975,889826..889996,890117..890215,891035..891302,892106..>892191)
location: region:881842-892191:1
so has part: feature:881842-882055:1:exon
so has part: feature:882433-882581:1:exon
so has part: feature:884655-885066:1:exon
so has part: feature:885842-885971:1:exon
so has part: feature:886324-886447:1:exon
so has part: feature:886646-886723:1:exon
so has part: feature:887490-887712:1:exon
so has part: feature:888089-888117:1:exon
so has part: feature:888862-888975:1:exon
so has part: feature:889826-889996:1:exon
so has part: feature:890117-890215:1:exon
so has part: feature:891035-891302:1:exon
so has part: feature:892106-892191:1:exon

XP_015194250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:881842-882055:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:882433-882581:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:884655-885066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:885842-885971:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:886324-886447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:886646-886723:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:887490-887712:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:888089-888117:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888862-888975:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889826-889996:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:890117-890215:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:891035-891302:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:892106-892191:1:exon

actn3
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: actn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(895296..905906)
location: region:895296-905906:-1
so has part: feature:895296-905906:-1:exon
subclass of: SO_0000010

102686858
type: Gene
SIO_000068: ncbigene

position:895296:-1
position: 895296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905906:-1
position: 905906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:895296-905906:-1:exon

actn3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: actn3
product: actinin, alpha 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 36 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015338792.1
SIO_010081: actn3
subclass of: SO_0000673
so part of: actn3
location: complement(join(895296..895678,895781..895939,896843..896908,898259..898405,898496..898675,899019..899153,899838..900020,900534..900674,901033..901141,901413..901563,901673..901820,902517..902747,903469..903561,904271..904356,904564..904645,905381..905459,905808..905906))
location: region:895296-905906:-1
so has part: feature:905808-905906:-1:exon
so has part: feature:905381-905459:-1:exon
so has part: feature:904564-904645:-1:exon
so has part: feature:904271-904356:-1:exon
so has part: feature:903469-903561:-1:exon
so has part: feature:902517-902747:-1:exon
so has part: feature:901673-901820:-1:exon
so has part: feature:901413-901563:-1:exon
so has part: feature:901033-901141:-1:exon
so has part: feature:900534-900674:-1:exon
so has part: feature:899838-900020:-1:exon
so has part: feature:899019-899153:-1:exon
so has part: feature:898496-898675:-1:exon
so has part: feature:898259-898405:-1:exon
so has part: feature:896843-896908:-1:exon
so has part: feature:895781-895939:-1:exon
so has part: feature:895296-895678:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:905808-905906:-1:exon

position:905808:-1
position: 905808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:905381-905459:-1:exon

position:905381:-1
position: 905381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905459:-1
position: 905459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:904564-904645:-1:exon

position:904564:-1
position: 904564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904645:-1
position: 904645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:904271-904356:-1:exon

position:904271:-1
position: 904271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904356:-1
position: 904356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:903469-903561:-1:exon

position:903469:-1
position: 903469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903561:-1
position: 903561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:902517-902747:-1:exon

position:902517:-1
position: 902517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902747:-1
position: 902747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:901673-901820:-1:exon

position:901673:-1
position: 901673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901820:-1
position: 901820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:901413-901563:-1:exon

position:901413:-1
position: 901413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901563:-1
position: 901563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:901033-901141:-1:exon

position:901033:-1
position: 901033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901141:-1
position: 901141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:900534-900674:-1:exon

position:900534:-1
position: 900534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900674:-1
position: 900674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:899838-900020:-1:exon

position:899838:-1
position: 899838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900020:-1
position: 900020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:899019-899153:-1:exon

position:899019:-1
position: 899019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899153:-1
position: 899153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:898496-898675:-1:exon

position:898496:-1
position: 898496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898675:-1
position: 898675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:898259-898405:-1:exon

position:898259:-1
position: 898259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898405:-1
position: 898405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:896843-896908:-1:exon

position:896843:-1
position: 896843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896908:-1
position: 896908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:895781-895939:-1:exon

position:895781:-1
position: 895781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895939:-1
position: 895939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:895296-895678:-1:exon

position:895678:-1
position: 895678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

actn3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: actn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-actinin-3
translation: MLDAEDIVNTPKPDEKAIMTYVSCFYHAFAGAEQAETAANRICKVLAVNQENEKLMEEYEKLASELLEWIRRTIPWLENRVAEQTMRAMQQKLEDFRDYRRVHKPPRVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDIANAWKGLEQVEKGYEEWLLTEIRRLERLDHLAEKFKQKCALHETWTRGKEELLSQKDYESASLMEIRALMRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAATVNSRCQGICDQWDNLGTLTQKRRDALERVEKLWETIDQLYLEFAKRAAPFNNWMDGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADKERMATMGIHSEILKIAQTYGIKLSGINPYTNLSSQDISNKWEAVKQLVPLRDQMLQEELARQQANERLRRQFAAQANVIGPWIQTKMEEIGHISVEMAGSLEEQMNQLKQYEQNIINYKSNIDKLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQLNEFRASFNHFDRKRNGMMDPDDFRACLISMGYDLGEVEFARIMTLVDPNNTGVVTFQAFIDFMTRETAETDTAEQVMASFKILASDKSYITVEELRRELPPEQAEYCISRMTKYVGTDAQPGALDYISFSSALYGESDL
SIO_010081: actn3
subclass of: SO_0000673
so part of: actn3
location: complement(join(895520..895678,895781..895939,896843..896908,898259..898405,898496..898675,899019..899153,899838..900020,900534..900674,901033..901141,901413..901563,901673..901820,902517..902747,903469..903561,904271..904356,904564..904579))
location: region:895520-904579:-1
so has part: feature:904564-904579:-1:exon
so has part: feature:904271-904356:-1:exon
so has part: feature:903469-903561:-1:exon
so has part: feature:902517-902747:-1:exon
so has part: feature:901673-901820:-1:exon
so has part: feature:901413-901563:-1:exon
so has part: feature:901033-901141:-1:exon
so has part: feature:900534-900674:-1:exon
so has part: feature:899838-900020:-1:exon
so has part: feature:899019-899153:-1:exon
so has part: feature:898496-898675:-1:exon
so has part: feature:898259-898405:-1:exon
so has part: feature:896843-896908:-1:exon
so has part: feature:895781-895939:-1:exon
so has part: feature:895520-895678:-1:exon

XP_015194278.1
type: Protein
SIO_000068: ncbiprotein

position:895520:-1
position: 895520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904579:-1
position: 904579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:904564-904579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:904271-904356:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:903469-903561:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:902517-902747:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:901673-901820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901413-901563:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:901033-901141:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:900534-900674:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:899838-900020:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:899019-899153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:898496-898675:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:898259-898405:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:896843-896908:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:895781-895939:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:895520-895678:-1:exon

ccs
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ccs
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(940540..943161)
location: region:940540-943161:-1
so has part: feature:940540-943161:-1:exon
subclass of: SO_0000010

102687058
type: Gene
SIO_000068: ncbigene

position:940540:-1
position: 940540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943161:-1
position: 943161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:940540-943161:-1:exon

ccs
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ccs
product: copper chaperone for superoxide dismutase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338765.1
SIO_010081: ccs
subclass of: SO_0000673
so part of: ccs
location: complement(join(940540..940585,940694..940871,941586..941723,941926..943161))
location: region:940540-943161:-1
so has part: feature:941926-943161:-1:exon
so has part: feature:941586-941723:-1:exon
so has part: feature:940694-940871:-1:exon
so has part: feature:940540-940585:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:941926-943161:-1:exon

position:941926:-1
position: 941926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:941586-941723:-1:exon

position:941586:-1
position: 941586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941723:-1
position: 941723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:940694-940871:-1:exon

position:940694:-1
position: 940694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940871:-1
position: 940871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:940540-940585:-1:exon

position:940585:-1
position: 940585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ccs
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ccs
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copper chaperone for superoxide dismutase
translation: MSCDSCAGAVRASLEGVPGVRSVAVDRQREEVLVDTTLTAREVQELIEATGRRAVLKGMGVSEQGDLGVAVAMLEGPGPVQGVVRFLQVSEGLCLIDGTIDGLRPGPHGLHVHEFGDLTHDCLREVAQGSGSRPPTTF
SIO_010081: ccs
subclass of: SO_0000673
so part of: ccs
location: complement(join(940540..940585,940694..940871,941586..941723,941926..941980))
location: region:940540-941980:-1
so has part: feature:941926-941980:-1:exon
so has part: feature:941586-941723:-1:exon
so has part: feature:940694-940871:-1:exon
so has part: feature:940540-940585:-1:exon

XP_015194251.1
type: Protein
SIO_000068: ncbiprotein

position:941980:-1
position: 941980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941926-941980:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:941586-941723:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:940694-940871:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940540-940585:-1:exon

dpp3
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: dpp3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(990143..999227)
location: region:990143-999227:-1
so has part: feature:990143-999227:-1:exon
subclass of: SO_0000010

102687464
type: Gene
SIO_000068: ncbigene

position:990143:-1
position: 990143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999227:-1
position: 999227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:990143-999227:-1:exon

dpp3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: dpp3
product: dipeptidyl-peptidase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338766.1
SIO_010081: dpp3
subclass of: SO_0000673
so part of: dpp3
location: complement(join(990143..990584,990689..990851,995748..995947,996158..996216,996433..996563,998671..998832,999112..999227))
location: region:990143-999227:-1
so has part: feature:999112-999227:-1:exon
so has part: feature:998671-998832:-1:exon
so has part: feature:996433-996563:-1:exon
so has part: feature:996158-996216:-1:exon
so has part: feature:995748-995947:-1:exon
so has part: feature:990689-990851:-1:exon
so has part: feature:990143-990584:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:999112-999227:-1:exon

position:999112:-1
position: 999112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:998671-998832:-1:exon

position:998671:-1
position: 998671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998832:-1
position: 998832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:996433-996563:-1:exon

position:996433:-1
position: 996433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996563:-1
position: 996563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:996158-996216:-1:exon

position:996158:-1
position: 996158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996216:-1
position: 996216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:995748-995947:-1:exon

position:995748:-1
position: 995748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995947:-1
position: 995947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:990689-990851:-1:exon

position:990689:-1
position: 990689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990851:-1
position: 990851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:990143-990584:-1:exon

position:990584:-1
position: 990584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dpp3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: dpp3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dipeptidyl peptidase 3
translation: MGNYKSFGDTKFIPNLPQEKLKALVWQSQVFRDNPDQMEELWSTCGDLMYSLEERQKQLGLGEEARLGLGVGEYAAGENQRRMLEEYVRSFTFGSVEAHKEGSRFWIKDRGPIVECYIGFIESYRDPFGSRGEFEGFVAVVNKAMSARFARLVGSAEVLLPELPWPSEFEKDRFLRPDFTSLDVLTFAGSGIPAGINIPNCEVHKATADVEGGRALYEGYSAVTDDEPPHFLRLRQTVLLRKEPRKMFVQANTRVKGEAVELLEYEGTAAGLIRSFADRFPEDAERIEDGLLELSRRDAPCWC
SIO_010081: dpp3
subclass of: SO_0000673
so part of: dpp3
location: complement(join(990442..990584,990689..990851,995748..995947,996158..996216,996433..996563,998671..998832,999112..999165))
location: region:990442-999165:-1
so has part: feature:999112-999165:-1:exon
so has part: feature:998671-998832:-1:exon
so has part: feature:996433-996563:-1:exon
so has part: feature:996158-996216:-1:exon
so has part: feature:995748-995947:-1:exon
so has part: feature:990689-990851:-1:exon
so has part: feature:990442-990584:-1:exon

XP_015194252.1
type: Protein
SIO_000068: ncbiprotein

position:990442:-1
position: 990442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999165:-1
position: 999165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:999112-999165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:998671-998832:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:996433-996563:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:996158-996216:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:995748-995947:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:990689-990851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:990442-990584:-1:exon

LOC102687670
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102687670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1010370..1024962
location: region:1010370-1024962:1
so has part: feature:1010370-1024962:1:exon
subclass of: SO_0000010

102687670
type: Gene
SIO_000068: ncbigene

position:1010370:1
position: 1010370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024962:1
position: 1024962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010370-1024962:1:exon

LOC102687670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102687670
product: endothelial PAS domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338767.1
SIO_010081: LOC102687670
subclass of: SO_0000673
so part of: LOC102687670
location: join(1010370..1010586,1017650..1017756,1017847..1017994,1018276..1018588,1019624..1019725,1020375..1020718,1022154..1022305,1022706..1022939,1024515..1024962)
location: region:1010370-1024962:1
so has part: feature:1010370-1010586:1:exon
so has part: feature:1017650-1017756:1:exon
so has part: feature:1017847-1017994:1:exon
so has part: feature:1018276-1018588:1:exon
so has part: feature:1019624-1019725:1:exon
so has part: feature:1020375-1020718:1:exon
so has part: feature:1022154-1022305:1:exon
so has part: feature:1022706-1022939:1:exon
so has part: feature:1024515-1024962:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1010370-1010586:1:exon

position:1010586:1
position: 1010586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1017650-1017756:1:exon

position:1017650:1
position: 1017650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1017756:1
position: 1017756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1017847-1017994:1:exon

position:1017847:1
position: 1017847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1017994:1
position: 1017994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1018276-1018588:1:exon

position:1018276:1
position: 1018276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1018588:1
position: 1018588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1019624-1019725:1:exon

position:1019624:1
position: 1019624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1019725:1
position: 1019725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1020375-1020718:1:exon

position:1020375:1
position: 1020375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020718:1
position: 1020718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1022154-1022305:1:exon

position:1022154:1
position: 1022154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022305:1
position: 1022305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1022706-1022939:1:exon

position:1022706:1
position: 1022706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022939:1
position: 1022939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1024515-1024962:1:exon

position:1024515:1
position: 1024515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102687670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102687670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial PAS domain-containing protein 1-like
translation: MSEARKKRVVELTGYEESELLGRSVYQYYHALDSRHILKTHHNLFSKGQSSTGQYRLLVKRGGYVWVETDATVVYNSRSGQPQSVICVNYILSEPLESEVIFSLEQTEDLSPCPVAGEPLPLCAPLSGGWGQLARAPAETTTALYWERGQPGEPCATRSPGAQWGWMYITLWLLHQFCTSASGGQQGPESIRSRVNRHPDSVEGGVDEGTGPLMERLLEWSFDRQVQHHQQQDFTEADLDTLAPYIPMDGEDFQLAPIVEEGARGPLGAGSFSGPLLSLGTPDRQGCGRPAPSVLGPQSSPSLPRPPALSGPPQRGALWPPRLPVRGPSCPRGPPQPPRAAGTRPSWTDSAASRPQCGCHQAWERDHAAPLWKRTKLPLELRPGTQATGDPSWWSSALSPTLPGTEVCGCSRAPQGSVPWAPAYTGALGTPPGYTGATGTPPGYTGALGTPPGYTGTPGMPSRHPFSSSAPPRSGGVTGVSRVLPVLSPWECEVNAPLGPASSLLDGAEILSALDQAATRLEELGTL
SIO_010081: LOC102687670
subclass of: SO_0000673
so part of: LOC102687670
location: join(1010564..1010586,1017650..1017756,1017847..1017994,1018276..1018588,1019624..1019725,1020375..1020718,1022154..1022305,1022706..1022939,1024515..1024675)
location: region:1010564-1024675:1
so has part: feature:1010564-1010586:1:exon
so has part: feature:1017650-1017756:1:exon
so has part: feature:1017847-1017994:1:exon
so has part: feature:1018276-1018588:1:exon
so has part: feature:1019624-1019725:1:exon
so has part: feature:1020375-1020718:1:exon
so has part: feature:1022154-1022305:1:exon
so has part: feature:1022706-1022939:1:exon
so has part: feature:1024515-1024675:1:exon

XP_015194253.1
type: Protein
SIO_000068: ncbiprotein

position:1010564:1
position: 1010564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024675:1
position: 1024675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010564-1010586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1017650-1017756:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1017847-1017994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1018276-1018588:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1019624-1019725:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1020375-1020718:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1022154-1022305:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1022706-1022939:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1024515-1024675:1:exon

LOC102694060
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102694060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1031153..1036774)
location: region:1031153-1036774:-1
so has part: feature:1031153-1036774:-1:exon
subclass of: SO_0000010

102694060
type: Gene
SIO_000068: ncbigene

position:1031153:-1
position: 1031153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1036774:-1
position: 1036774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1031153-1036774:-1:exon

LOC102694060
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102694060
product: homeobox protein SIX6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_006642759.2
SIO_010081: LOC102694060
subclass of: SO_0000673
so part of: LOC102694060
location: complement(join(1031153..1031545,1035703..1036774))
location: region:1031153-1036774:-1
so has part: feature:1035703-1036774:-1:exon
so has part: feature:1031153-1031545:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1035703-1036774:-1:exon

position:1035703:-1
position: 1035703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1031153-1031545:-1:exon

position:1031545:-1
position: 1031545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102694060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102694060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein SIX6-like
translation: MFPLPMFTPEQVARVCENLEETGDIERLARFLWSLPAAVPGSAGEALSRHESVVRARALVAFHGGNFEALYRILQTHRFTRQSHARLQALWLDAHYREAERLRGRPLGPVEKYRIRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSRKRHLAQATGLTPTQVGNWFKNRRQRDRAASAKNR
SIO_010081: LOC102694060
subclass of: SO_0000673
so part of: LOC102694060
location: complement(join(1031378..1031545,1035703..1036110))
location: region:1031378-1036110:-1
so has part: feature:1035703-1036110:-1:exon
so has part: feature:1031378-1031545:-1:exon

XP_006642822.1
type: Protein
SIO_000068: ncbiprotein

position:1031378:-1
position: 1031378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1036110:-1
position: 1036110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1035703-1036110:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1031378-1031545:-1:exon

b4gat1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: b4gat1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1046406..1050144)
location: region:1046406-1050144:-1
so has part: feature:1046406-1050144:-1:exon
subclass of: SO_0000010

102694260
type: Gene
SIO_000068: ncbigene

position:1046406:-1
position: 1046406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050144:-1
position: 1050144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046406-1050144:-1:exon

b4gat1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: b4gat1
product: beta-1,4-glucuronyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006642760.2
SIO_010081: b4gat1
subclass of: SO_0000673
so part of: b4gat1
location: complement(join(1046406..1047577,1048769..1050144))
location: region:1046406-1050144:-1
so has part: feature:1048769-1050144:-1:exon
so has part: feature:1046406-1047577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1048769-1050144:-1:exon

position:1048769:-1
position: 1048769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1046406-1047577:-1:exon

position:1047577:-1
position: 1047577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

b4gat1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: b4gat1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,4-glucuronyltransferase 1
translation: MHLPKNCSLFKMALGALAAVALLQLLYLSFLSRLHGRQQRYRYSELFGAAARRGARPAQRDAHKERLKFSLATGGIFDGSGQYRVYKNLLQSDFSAGRRPEAPALALATHTSINNLHQLGPLLERWQAPLSVAVFAHGADARLATALAYALSVFCPGVRALVDLHLVCPSGEAASFPAEDRAPFAGLGDCGGVWARLEAQRGRLRNYALGGNVSYPNNLLRNVARGAAEEGAPYVLVADVDMVPSADLPRLFLGLLRRRRPAPREVFVVPAFEIRHARRVPAAKAELLQLYQVGEVRPFYEELCPRCQAPTNYSQWVNWRGRGAGAELEVAYTLAWTDPWEPFYIGARGLPPFDESFRQYGFNRISQACELHVAGYRFSVLSSAFLVHRGFKVAGEFHAQKEEENRQNRVLFRRFKEGLKAKYPSSTRRC
SIO_010081: b4gat1
subclass of: SO_0000673
so part of: b4gat1
location: complement(join(1047386..1047577,1048769..1049869))
location: region:1047386-1049869:-1
so has part: feature:1048769-1049869:-1:exon
so has part: feature:1047386-1047577:-1:exon

XP_006642823.1
type: Protein
SIO_000068: ncbiprotein

position:1047386:-1
position: 1047386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049869:-1
position: 1049869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048769-1049869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1047386-1047577:-1:exon

trnas-gcu
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: trnas-gcu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1051163..1051244
location: region:1051163-1051244:1
so has part: feature:1051163-1051244:1:exon
subclass of: SO_0000663

102659345
type: Gene
SIO_000068: ncbigene

position:1051163:1
position: 1051163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1051244:1
position: 1051244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051163-1051244:1:exon

trnas-gcu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7918
gene: trnas-gcu
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon GCU); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1051196..1051198,aa:Ser,seq:gct)
SIO_010081: trnas-gcu
subclass of: SO_0000673
so part of: trnas-gcu
location: 1051163..1051244
location: region:1051163-1051244:1
so has part: feature:1051163-1051244:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1051163-1051244:1:exon

pfdn2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: pfdn2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1052400..1057128)
location: region:1052400-1057128:-1
so has part: feature:1052400-1057128:-1:exon
subclass of: SO_0000010

102687869
type: Gene
SIO_000068: ncbigene

position:1052400:-1
position: 1052400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1057128:-1
position: 1057128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052400-1057128:-1:exon

pfdn2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: pfdn2
product: prefoldin subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338768.1
SIO_010081: pfdn2
subclass of: SO_0000673
so part of: pfdn2
location: complement(join(1052400..1052858,1056807..1057128))
location: region:1052400-1057128:-1
so has part: feature:1056807-1057128:-1:exon
so has part: feature:1052400-1052858:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1056807-1057128:-1:exon

position:1056807:-1
position: 1056807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1052400-1052858:-1:exon

position:1052858:-1
position: 1052858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pfdn2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: pfdn2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prefoldin subunit 2
translation: MAASSASSGGTAGGKSNSGGGKQSGPTAEQVTPEAGGEPRSPGLPGLGRGGGGRGGVGMRRLIARSPEPSAATRAAPISGNTSSNAIAAVRRHDGTRHGEGENHTTFIYFFCSRFIRWCESDELASCVCADPSPRPLSQISKIVESLNAQMQTKGRELNEYRERYNIRLVGEEEGAGKAAGSANRESDGGGGGSKGGAGVLVS
SIO_010081: pfdn2
subclass of: SO_0000673
so part of: pfdn2
location: complement(join(1052543..1052858,1056807..1057102))
location: region:1052543-1057102:-1
so has part: feature:1056807-1057102:-1:exon
so has part: feature:1052543-1052858:-1:exon

XP_015194254.1
type: Protein
SIO_000068: ncbiprotein

position:1052543:-1
position: 1052543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1057102:-1
position: 1057102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1056807-1057102:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1052543-1052858:-1:exon

nit1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: nit1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1057221..1061950
location: region:1057221-1061950:1
so has part: feature:1057221-1061950:1:exon
subclass of: SO_0000010

102688076
type: Gene
SIO_000068: ncbigene

position:1057221:1
position: 1057221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061950:1
position: 1061950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057221-1061950:1:exon

nit1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: nit1
product: nitrilase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_006642808.2
SIO_010081: nit1
subclass of: SO_0000673
so part of: nit1
location: join(1057221..1057308,1057869..1058029,1058706..1058936,1059148..1059251,1059790..1059926,1060492..1060617,1061262..1061950)
location: region:1057221-1061950:1
so has part: feature:1057221-1057308:1:exon
so has part: feature:1057869-1058029:1:exon
so has part: feature:1058706-1058936:1:exon
so has part: feature:1059148-1059251:1:exon
so has part: feature:1059790-1059926:1:exon
so has part: feature:1060492-1060617:1:exon
so has part: feature:1061262-1061950:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1057221-1057308:1:exon

position:1057308:1
position: 1057308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1057869-1058029:1:exon

position:1057869:1
position: 1057869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058029:1
position: 1058029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1058706-1058936:1:exon

position:1058706:1
position: 1058706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058936:1
position: 1058936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1059148-1059251:1:exon

position:1059148:1
position: 1059148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059251:1
position: 1059251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1059790-1059926:1:exon

position:1059790:1
position: 1059790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059926:1
position: 1059926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1060492-1060617:1:exon

position:1060492:1
position: 1060492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060617:1
position: 1060617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1061262-1061950:1:exon

position:1061262:1
position: 1061262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nit1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: nit1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nitrilase homolog 1
translation: MLRRGTLWSRASYAWSTALRYTSFTSRRARPGDQERMSSRKPVAALCQVTSTPDKEANFCSCEGLVERAREGGACMAFLPEGFDFIGSGREETLELAEALEGETVGRYAALARKLGIWLSLGGFHERGEDWERDRRIYNSHVILDDQGRIAAVYRKCHLFDVELTGRGVSLKESSFTIPGPCIVPPVQTPLGKLGLGVCYDLRFPEFSLALVRKGAEILTYPSAFTVATGTAHWEVLLRARAIETQCFVLAAAQVGRHHARRASFGHALALGPWGEVLGACGATEPGLALVEVDLQRLREVRRDMPLQQHRRGEQFYSQD
SIO_010081: nit1
subclass of: SO_0000673
so part of: nit1
location: join(1057923..1058029,1058706..1058936,1059148..1059251,1059790..1059926,1060492..1060617,1061262..1061519)
location: region:1057923-1061519:1
so has part: feature:1057923-1058029:1:exon
so has part: feature:1058706-1058936:1:exon
so has part: feature:1059148-1059251:1:exon
so has part: feature:1059790-1059926:1:exon
so has part: feature:1060492-1060617:1:exon
so has part: feature:1061262-1061519:1:exon

XP_006642871.2
type: Protein
SIO_000068: ncbiprotein

position:1057923:1
position: 1057923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061519:1
position: 1061519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057923-1058029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1058706-1058936:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059148-1059251:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1059790-1059926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1060492-1060617:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1061262-1061519:1:exon

LOC102688280
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102688280
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1062054..1065973
location: region:1062054-1065973:1
so has part: feature:1062054-1065973:1:exon
subclass of: SO_0000010

102688280
type: Gene
SIO_000068: ncbigene

position:1062054:1
position: 1062054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1065973:1
position: 1065973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062054-1065973:1:exon

LOC102688280
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102688280
product: collagen alpha-1(III) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338769.1
SIO_010081: LOC102688280
subclass of: SO_0000673
so part of: LOC102688280
location: join(1062054..1063285,1064023..1064214,1064687..1064791,1065882..1065973)
location: region:1062054-1065973:1
so has part: feature:1062054-1063285:1:exon
so has part: feature:1064023-1064214:1:exon
so has part: feature:1064687-1064791:1:exon
so has part: feature:1065882-1065973:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1062054-1063285:1:exon

position:1063285:1
position: 1063285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1064023-1064214:1:exon

position:1064023:1
position: 1064023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064214:1
position: 1064214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1064687-1064791:1:exon

position:1064687:1
position: 1064687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064791:1
position: 1064791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1065882-1065973:1:exon

position:1065882:1
position: 1065882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102688280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102688280
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(III) chain-like
translation: MVLQRAVNTTSRSNGDLQRAAMSRKRSRFFSAVAEPPDLKKVFMDSAGQSDDDFADLGAEPELQVSVSEIADHLGRSISWALDAALRQIRRVVSARIRVLRLELQDKTAEIEVLRARLETAGSGPVSVPARGPAALGARPPPAGQPAIRPGDLRKLKAGAPEIKKEKVNAICDYLMKDKNARSKSGAWCGGAAPSGTDKERVPSSPPPLWAEPGPEEQPGGGAVEGGPVSEELFALLPSHGKLLDRYHGPDSAGDLSPGNSPRYLQPGVQLFKSDMGPAPSDPGDEGPPGDAPPAPAGGPAEQTWGPLGSAGDGVPIRAPEGVERLEGGGPGPRAQAEACLCPFCGTFCPSAAFLGEHLKAAHQGDAAGADPCVSPGGQGLERGRQRDPDNKSVLK
SIO_010081: LOC102688280
subclass of: SO_0000673
so part of: LOC102688280
location: join(1062484..1063285,1064023..1064214,1064687..1064791,1065882..1065973)
location: region:1062484-1065973:1
so has part: feature:1062484-1063285:1:exon
so has part: feature:1064023-1064214:1:exon
so has part: feature:1064687-1064791:1:exon
so has part: feature:1065882-1065973:1:exon

XP_015194255.1
type: Protein
SIO_000068: ncbiprotein

position:1062484:1
position: 1062484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062484-1063285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064023-1064214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1064687-1064791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1065882-1065973:1:exon

LOC102694454
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102694454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1074294..1076933
location: region:1074294-1076933:1
so has part: feature:1074294-1076933:1:exon
subclass of: SO_0000010

102694454
type: Gene
SIO_000068: ncbigene

position:1074294:1
position: 1074294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076933:1
position: 1076933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1074294-1076933:1:exon

LOC102694454
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102694454
product: somatostatin receptor type 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_006642761.2
SIO_010081: LOC102694454
subclass of: SO_0000673
so part of: LOC102694454
location: join(1074294..1074915,1075297..1076933)
location: region:1074294-1076933:1
so has part: feature:1074294-1074915:1:exon
so has part: feature:1075297-1076933:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1074294-1074915:1:exon

position:1074915:1
position: 1074915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1075297-1076933:1:exon

position:1075297:1
position: 1075297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102694454
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102694454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: somatostatin receptor type 1-like
translation: MAAGNGTTEPPSDPPFNASLGYGEPEQDVSKIVIPSIYALVCCVGLTGNAMVIYVILKYAKMKTATNIYILNLAIADELFMLSVPFLATAAALRRWPFGALACRLVLSVDGINMFTSVFCLTVLSVDRYIAVAHPIRAARYRRPTVAKAINVCVWALSLVVILPIIVFAGTVPRGDGGVECNFLWPEPSWSEAFVVYTFLLGFLLPVAAICLCYCLIVAKMRAVALRAGWLQRRRSEKKITRMVLLVVTVFVACWLPFYVAQLLSVFRRPPDPVVNQLFVVLSYANSGANPILYGFVSDNFRRSFQRLVCLRWMDSRLDAEQVDYCAVALRRPVPCGPRASPKEPLASEMVYHNGTCNSRTTTL
SIO_010081: LOC102694454
subclass of: SO_0000673
so part of: LOC102694454
location: 1075486..1076580
location: region:1075486-1076580:1
so has part: feature:1075486-1076580:1:exon

XP_006642824.2
type: Protein
SIO_000068: ncbiprotein

position:1075486:1
position: 1075486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076580:1
position: 1076580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075486-1076580:1:exon

cd248
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: cd248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1084752..1089383)
location: region:1084752-1089383:-1
so has part: feature:1084752-1089383:-1:exon
subclass of: SO_0000010

102688488
type: Gene
SIO_000068: ncbigene

position:1084752:-1
position: 1084752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089383:-1
position: 1089383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1084752-1089383:-1:exon

cd248
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cd248
product: CD248 molecule
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338770.1
SIO_010081: cd248
subclass of: SO_0000673
so part of: cd248
location: complement(join(1084752..1087478,1088081..1089383))
location: region:1084752-1089383:-1
so has part: feature:1088081-1089383:-1:exon
so has part: feature:1084752-1087478:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1088081-1089383:-1:exon

position:1088081:-1
position: 1088081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1084752-1087478:-1:exon

position:1087478:-1
position: 1087478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cd248
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cd248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endosialin
translation: MGPLWRSCLLASLLWLAGAGQAQDLGERDALCRPGGCYAVYFQRKTFLDAWRSCRDRGGNLATVKRPEEAALIHELFSGLEPRAAARARARIWIGLQRQPRQCSATRPLRGFTWITGDQDTQYTHWLREDSPSTCAAPRCVVMTHSQDPRDRQDNLKWQDGSCTLPVDGYLCRYAYRGMCPPLESEGGGPVLYSTPFHLVSALLSHVPFGSVASVPCPEGTRGDQSALCLQREDGGTGWSREAPFCSDAPRDWCRRDNGGCQHLCRAADAHYYCECLEGYELGADGQSCGPADACRGDPCEFECHAAGGGFLCACPEGYLFGWAPELPGWPTDTPPLDWPTDTPPPEWPTDTPHPDLPTDTPLLDWPTDTPPLDWPTDTPHPDLPTDTPLLDWPTDTPPPHWPTDTPHPDLPTDTPLLDWPTDTPALDWPTDTPHPDRPTDTPPPHWPTDTPPLDWPTDTPALDWLTYQPGLVWVPPDFGWETDTPPEGLTTTHPENRGRPTSGRAAPPDPTPDRWRTGRIGEVPPSTPPAAASEHQGAPSPGTPGATAAAAGSGGRASPEDEEGGTSGWHSPPSPPSTAGPPGTPTPPAPGSEAPPGGTSRQRRDNSWLLVALLVPLSIFVVVMVALGIVYCTRCAVRPRSKSVADCYRWITSSAGKQGV
SIO_010081: cd248
subclass of: SO_0000673
so part of: cd248
location: complement(join(1086452..1087478,1088081..1089039))
location: region:1086452-1089039:-1
so has part: feature:1088081-1089039:-1:exon
so has part: feature:1086452-1087478:-1:exon

XP_015194256.1
type: Protein
SIO_000068: ncbiprotein

position:1086452:-1
position: 1086452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089039:-1
position: 1089039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1088081-1089039:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1086452-1087478:-1:exon

rce1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: rce1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1109553..1116215)
location: region:1109553-1116215:-1
so has part: feature:1109553-1116215:-1:exon
subclass of: SO_0000010

102688688
type: Gene
SIO_000068: ncbigene

position:1109553:-1
position: 1109553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116215:-1
position: 1116215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109553-1116215:-1:exon

rce1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: rce1
product: Ras converting CAAX endopeptidase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338771.1
SIO_010081: rce1
subclass of: SO_0000673
so part of: rce1
location: complement(join(1109553..1109640,1112248..1112485,1113230..1113316,1114895..1114973,1115132..1115215,1115731..1116215))
location: region:1109553-1116215:-1
so has part: feature:1115731-1116215:-1:exon
so has part: feature:1115132-1115215:-1:exon
so has part: feature:1114895-1114973:-1:exon
so has part: feature:1113230-1113316:-1:exon
so has part: feature:1112248-1112485:-1:exon
so has part: feature:1109553-1109640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1115731-1116215:-1:exon

position:1115731:-1
position: 1115731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1115132-1115215:-1:exon

position:1115132:-1
position: 1115132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1115215:-1
position: 1115215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1114895-1114973:-1:exon

position:1114895:-1
position: 1114895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114973:-1
position: 1114973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1113230-1113316:-1:exon

position:1113230:-1
position: 1113230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1113316:-1
position: 1113316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1112248-1112485:-1:exon

position:1112248:-1
position: 1112248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112485:-1
position: 1112485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1109553-1109640:-1:exon

position:1109640:-1
position: 1109640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rce1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: rce1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CAAX prenyl protease 2
translation: MGVRPSPPLLALMGIRLEGLIPAATLPLLLTMVLFLGPLIQMAMDCPWDFIDGLKVGIVPRLPAHFHHVIELLRFRQGTVLGIFLSAVFQFSYTAVFGAYTAFIFIRTGECLTLPCMCVCVCVCVCVWPCCPSLSAPGLYVSLFLSQPLCWVVLCCCAGLSLSPCVGSSWVRGLPLNSAALVVGSGRTPALMGVD
SIO_010081: rce1
subclass of: SO_0000673
so part of: rce1
location: complement(join(1109553..1109640,1112248..1112485,1113230..1113316,1114895..1114973,1115132..1115215,1115731..1115742))
location: region:1109553-1115742:-1
so has part: feature:1115731-1115742:-1:exon
so has part: feature:1115132-1115215:-1:exon
so has part: feature:1114895-1114973:-1:exon
so has part: feature:1113230-1113316:-1:exon
so has part: feature:1112248-1112485:-1:exon
so has part: feature:1109553-1109640:-1:exon

XP_015194257.1
type: Protein
SIO_000068: ncbiprotein

position:1115742:-1
position: 1115742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115731-1115742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115132-1115215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1114895-1114973:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1113230-1113316:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1112248-1112485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1109553-1109640:-1:exon

LOC107075855
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075855
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1117897..1124136
location: region:1117897-1124136:1
so has part: feature:1117897-1124136:1:exon
subclass of: SO_0000010

107075855
type: Gene
SIO_000068: ncbigene

position:1117897:1
position: 1117897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124136:1
position: 1124136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1117897-1124136:1:exon

LOC107075855
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107075855
product: E3 ubiquitin-protein ligase pellino homolog 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015338820.1
SIO_010081: LOC107075855
subclass of: SO_0000673
so part of: LOC107075855
location: join(1117897..1118138,1123320..1123497,1123974..1124136)
location: region:1117897-1124136:1
so has part: feature:1117897-1118138:1:exon
so has part: feature:1123320-1123497:1:exon
so has part: feature:1123974-1124136:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1117897-1118138:1:exon

position:1118138:1
position: 1118138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1123320-1123497:1:exon

position:1123320:1
position: 1123320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123497:1
position: 1123497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1123974-1124136:1:exon

position:1123974:1
position: 1123974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107075855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107075855
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase pellino homolog 3-like
translation: MVLEGSSEALCPPPSLDLRPSPPPGSGPHPHEGDREAAKYGELIVLGYNGCLANGDKGRRRSRLALYKRPKANGVKPDVIHNISTPLVSKVRTPP
SIO_010081: LOC107075855
subclass of: SO_0000673
so part of: LOC107075855
location: join(1123358..1123497,1123974..1124121)
location: region:1123358-1124121:1
so has part: feature:1123358-1123497:1:exon
so has part: feature:1123974-1124121:1:exon

XP_015194306.1
type: Protein
SIO_000068: ncbiprotein

position:1123358:1
position: 1123358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124121:1
position: 1124121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1123358-1123497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1123974-1124121:1:exon

LOC102694651
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102694651
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1136975..1143005)
location: region:1136975-1143005:-1
so has part: feature:1136975-1143005:-1:exon
subclass of: SO_0000010

102694651
type: Gene
SIO_000068: ncbigene

position:1136975:-1
position: 1136975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143005:-1
position: 1143005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1136975-1143005:-1:exon

LOC102694651
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102694651
product: ras-related protein Rab-1B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338772.1
SIO_010081: LOC102694651
subclass of: SO_0000673
so part of: LOC102694651
location: complement(join(1136975..1138466,1140232..1140442,1141779..1141851,1142783..1143005))
location: region:1136975-1143005:-1
so has part: feature:1142783-1143005:-1:exon
so has part: feature:1141779-1141851:-1:exon
so has part: feature:1140232-1140442:-1:exon
so has part: feature:1136975-1138466:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1142783-1143005:-1:exon

position:1142783:-1
position: 1142783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1141779-1141851:-1:exon

position:1141779:-1
position: 1141779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141851:-1
position: 1141851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1140232-1140442:-1:exon

position:1140232:-1
position: 1140232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140442:-1
position: 1140442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1136975-1138466:-1:exon

position:1138466:-1
position: 1138466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102694651
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102694651
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-1B-like
translation: MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIVSEGPPAPPRRRGAGSRADRREGASATAGFCERLGSDIYVMSSLNLQRHAPASLCSQEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGGDKPHLKIESTPVRQSGGGCC
SIO_010081: LOC102694651
subclass of: SO_0000673
so part of: LOC102694651
location: complement(join(1138216..1138466,1140232..1140442,1141779..1141851,1142783..1142796))
location: region:1138216-1142796:-1
so has part: feature:1142783-1142796:-1:exon
so has part: feature:1141779-1141851:-1:exon
so has part: feature:1140232-1140442:-1:exon
so has part: feature:1138216-1138466:-1:exon

XP_015194258.1
type: Protein
SIO_000068: ncbiprotein

position:1138216:-1
position: 1138216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1142796:-1
position: 1142796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1142783-1142796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1141779-1141851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1140232-1140442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1138216-1138466:-1:exon

LOC102688887
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102688887
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1144561..1151535)
location: region:1144561-1151535:-1
so has part: feature:1144561-1151535:-1:exon
subclass of: SO_0000010

102688887
type: Gene
SIO_000068: ncbigene

position:1144561:-1
position: 1144561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151535:-1
position: 1151535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1144561-1151535:-1:exon

LOC102688887
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102688887
product: HRAS-like suppressor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015338815.1
SIO_010081: LOC102688887
subclass of: SO_0000673
so part of: LOC102688887
location: complement(join(1144561..1145320,1147786..1148054,1148629..1148731,1149209..1149387,1151428..1151535))
location: region:1144561-1151535:-1
so has part: feature:1151428-1151535:-1:exon
so has part: feature:1149209-1149387:-1:exon
so has part: feature:1148629-1148731:-1:exon
so has part: feature:1147786-1148054:-1:exon
so has part: feature:1144561-1145320:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1151428-1151535:-1:exon

position:1151428:-1
position: 1151428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1149209-1149387:-1:exon

position:1149209:-1
position: 1149209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149387:-1
position: 1149387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1148629-1148731:-1:exon

position:1148629:-1
position: 1148629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148731:-1
position: 1148731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1147786-1148054:-1:exon

position:1147786:-1
position: 1147786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148054:-1
position: 1148054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1144561-1145320:-1:exon

position:1145320:-1
position: 1145320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102688887
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102688887
product: HRAS-like suppressor 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015338818.1
SIO_010081: LOC102688887
subclass of: SO_0000673
so part of: LOC102688887
location: complement(join(1144561..1145320,1147786..1148054,1148629..1148731,1149209..1149342,1151428..1151523))
location: region:1144561-1151523:-1
so has part: feature:1151428-1151523:-1:exon
so has part: feature:1149209-1149342:-1:exon
so has part: feature:1148629-1148731:-1:exon
so has part: feature:1147786-1148054:-1:exon
so has part: feature:1144561-1145320:-1:exon

position:1151523:-1
position: 1151523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1151428-1151523:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149209-1149342:-1:exon

position:1149342:-1
position: 1149342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1148629-1148731:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147786-1148054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144561-1145320:-1:exon

LOC102688887
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102688887
product: HRAS-like suppressor 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015338817.1
SIO_010081: LOC102688887
subclass of: SO_0000673
so part of: LOC102688887
location: complement(join(1144561..1145320,1147786..1148054,1148629..1148731,1149209..1149342,1151068..1151234,1151428..1151522))
location: region:1144561-1151522:-1
so has part: feature:1151428-1151522:-1:exon
so has part: feature:1151068-1151234:-1:exon
so has part: feature:1149209-1149342:-1:exon
so has part: feature:1148629-1148731:-1:exon
so has part: feature:1147786-1148054:-1:exon
so has part: feature:1144561-1145320:-1:exon

position:1151522:-1
position: 1151522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1151428-1151522:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151068-1151234:-1:exon

position:1151068:-1
position: 1151068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151234:-1
position: 1151234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1149209-1149342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1148629-1148731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1147786-1148054:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144561-1145320:-1:exon

LOC102688887
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102688887
product: HRAS-like suppressor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015338816.1
SIO_010081: LOC102688887
subclass of: SO_0000673
so part of: LOC102688887
location: complement(join(1144561..1145320,1147786..1148054,1148629..1148731,1149209..1149387,1151068..1151234,1151428..1151522))
location: region:1144561-1151522:-1
so has part: feature:1151428-1151522:-1:exon
so has part: feature:1151068-1151234:-1:exon
so has part: feature:1149209-1149387:-1:exon
so has part: feature:1148629-1148731:-1:exon
so has part: feature:1147786-1148054:-1:exon
so has part: feature:1144561-1145320:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1151428-1151522:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151068-1151234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1149209-1149387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1148629-1148731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1147786-1148054:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144561-1145320:-1:exon

LOC102688887
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102688887
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HRAS-like suppressor 3
translation: MSAFWDEVKPGDLIEIFRLGYQHWALYVGNGYIVHLAPPSEVAGAGPSSMMSLTCDKAVVKRERLRRVAGDDRFRVNNALDRKRRPRPAYEIVKDAESLVGKWLEYSVVTSNCEHFVNELRYGTAESLQVQDTVTAVVTATVVLGAVGAMVSLFSNRKERNNKKW
SIO_010081: LOC102688887
subclass of: SO_0000673
so part of: LOC102688887
location: complement(join(1145210..1145320,1147786..1148054,1148629..1148731,1149209..1149223))
location: region:1145210-1149223:-1
so has part: feature:1149209-1149223:-1:exon
so has part: feature:1148629-1148731:-1:exon
so has part: feature:1147786-1148054:-1:exon
so has part: feature:1145210-1145320:-1:exon

XP_015194301.1
type: Protein
SIO_000068: ncbiprotein

position:1145210:-1
position: 1145210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149223:-1
position: 1149223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149209-1149223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148629-1148731:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147786-1148054:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1145210-1145320:-1:exon

LOC102688887
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102688887
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HRAS-like suppressor 3
translation: MSAFWDEVKPGDLIEIFRLGYQHWALYVGNGYIVHLAPPSEVAGAGPSSMMSLTCDKAVVKRERLRRVAGDDRFRVNNALDRKRRPRPAYEIVKDAESLVGKWLEYSVVTSNCEHFVNELRYGTAESLQVQDTVTAVVTATVVLGAVGAMVSLFSNRKERNNKKW
SIO_010081: LOC102688887
subclass of: SO_0000673
so part of: LOC102688887
location: complement(join(1145210..1145320,1147786..1148054,1148629..1148731,1149209..1149223))
location: region:1145210-1149223:-1
so has part: feature:1149209-1149223:-1:exon
so has part: feature:1148629-1148731:-1:exon
so has part: feature:1147786-1148054:-1:exon
so has part: feature:1145210-1145320:-1:exon

XP_015194302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1149209-1149223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148629-1148731:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147786-1148054:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1145210-1145320:-1:exon

LOC102688887
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102688887
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HRAS-like suppressor 3
translation: MSAFWDEVKPGDLIEIFRLGYQHWALYVGNGYIVHLAPPSEVAGAGPSSMMSLTCDKAVVKRERLRRVAGDDRFRVNNALDRKRRPRPAYEIVKDAESLVGKWLEYSVVTSNCEHFVNELRYGTAESLQVQDTVTAVVTATVVLGAVGAMVSLFSNRKERNNKKW
SIO_010081: LOC102688887
subclass of: SO_0000673
so part of: LOC102688887
location: complement(join(1145210..1145320,1147786..1148054,1148629..1148731,1149209..1149223))
location: region:1145210-1149223:-1
so has part: feature:1149209-1149223:-1:exon
so has part: feature:1148629-1148731:-1:exon
so has part: feature:1147786-1148054:-1:exon
so has part: feature:1145210-1145320:-1:exon

XP_015194303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1149209-1149223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148629-1148731:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147786-1148054:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1145210-1145320:-1:exon

LOC102688887
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102688887
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HRAS-like suppressor 3
translation: MSAFWDEVKPGDLIEIFRLGYQHWALYVGNGYIVHLAPPSEVAGAGPSSMMSLTCDKAVVKRERLRRVAGDDRFRVNNALDRKRRPRPAYEIVKDAESLVGKWLEYSVVTSNCEHFVNELRYGTAESLQVQDTVTAVVTATVVLGAVGAMVSLFSNRKERNNKKW
SIO_010081: LOC102688887
subclass of: SO_0000673
so part of: LOC102688887
location: complement(join(1145210..1145320,1147786..1148054,1148629..1148731,1149209..1149223))
location: region:1145210-1149223:-1
so has part: feature:1149209-1149223:-1:exon
so has part: feature:1148629-1148731:-1:exon
so has part: feature:1147786-1148054:-1:exon
so has part: feature:1145210-1145320:-1:exon

XP_015194304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1149209-1149223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148629-1148731:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147786-1148054:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1145210-1145320:-1:exon

LOC107075869
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1153400..1184184
location: region:1153400-1184184:1
so has part: feature:1153400-1184184:1:exon
subclass of: SO_0000011

107075869
type: Gene
SIO_000068: ncbigene

position:1153400:1
position: 1153400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1184184:1
position: 1184184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1153400-1184184:1:exon

LOC107075869
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075869
product: uncharacterized LOC107075869
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001477364.1
SIO_010081: LOC107075869
subclass of: SO_0000673
so part of: LOC107075869
location: join(1153400..1153521,1180899..1180994,1183756..1184184)
location: region:1153400-1184184:1
so has part: feature:1153400-1153521:1:exon
so has part: feature:1180899-1180994:1:exon
so has part: feature:1183756-1184184:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1153400-1153521:1:exon

position:1153521:1
position: 1153521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1180899-1180994:1:exon

position:1180899:1
position: 1180899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180994:1
position: 1180994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1183756-1184184:1:exon

position:1183756:1
position: 1183756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102689090
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102689090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1185419..1191985)
location: region:1185419-1191985:-1
so has part: feature:1185419-1191985:-1:exon
subclass of: SO_0000010

102689090
type: Gene
SIO_000068: ncbigene

position:1185419:-1
position: 1185419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1191985:-1
position: 1191985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1185419-1191985:-1:exon

LOC102689090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102689090
product: N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338773.1
SIO_010081: LOC102689090
subclass of: SO_0000673
so part of: LOC102689090
location: complement(join(1185419..1186521,1186624..1187899,1191579..1191985))
location: region:1185419-1191985:-1
so has part: feature:1191579-1191985:-1:exon
so has part: feature:1186624-1187899:-1:exon
so has part: feature:1185419-1186521:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1191579-1191985:-1:exon

position:1191579:-1
position: 1191579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1186624-1187899:-1:exon

position:1186624:-1
position: 1186624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187899:-1
position: 1187899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1185419-1186521:-1:exon

position:1186521:-1
position: 1186521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102689090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102689090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like
translation: MTEMRKKLFLCLPCICLVNLFLYGFVFLSVSLSHHPPASGASRDKLRPSPGQPVQAGGAFWATGLDESALWNLLQHMLDRRHNPLLRANASRPAGNGSEPPEGGATPGPRPPLAGIWAEQREWSGPCRRDPRMAAHLGDFNTLPGHVQDFVVSMHCREYPLLIDQPRLCQGGAPTLLLAIKSQVGNFENRQAIRETWGRGGQLGPWTVQTVFLLGRQDPSLGSYPDLGGLLQLEQQLHPDILQWDFRDTFFNLTLKDVLFLRWFARHCPAAGFVFKGDDDVFLNTGELLRFLAAQEAAGASRDLFVGEVIVQAAPMRDPALKYFVPESFFKGGYPPYAGGGGVVYSGPLALRLARVTERVTLFPIDDVYLGMCLLRLGVAPSTHPGFRTFDIEEKDRAEPCGMCLLRLGVAPSTHPGFRTFDIEEKDRAEPCAHRHLLLVHRRSPSQTIALWRRLTDPQLQC
SIO_010081: LOC102689090
subclass of: SO_0000673
so part of: LOC102689090
location: complement(join(1186336..1186521,1186624..1187826))
location: region:1186336-1187826:-1
so has part: feature:1186624-1187826:-1:exon
so has part: feature:1186336-1186521:-1:exon

XP_015194259.1
type: Protein
SIO_000068: ncbiprotein

position:1186336:-1
position: 1186336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187826:-1
position: 1187826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1186624-1187826:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1186336-1186521:-1:exon

LOC102689296
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102689296
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1198564..1204668)
location: region:1198564-1204668:-1
so has part: feature:1198564-1204668:-1:exon
subclass of: SO_0000010

102689296
type: Gene
SIO_000068: ncbigene

position:1198564:-1
position: 1198564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204668:-1
position: 1204668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1198564-1204668:-1:exon

LOC102689296
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102689296
product: dual specificity protein phosphatase 10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_006642814.2
SIO_010081: LOC102689296
subclass of: SO_0000673
so part of: LOC102689296
location: complement(join(1198564..1199006,1204482..1204668))
location: region:1198564-1204668:-1
so has part: feature:1204482-1204668:-1:exon
so has part: feature:1198564-1199006:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1204482-1204668:-1:exon

position:1204482:-1
position: 1204482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1198564-1199006:-1:exon

position:1199006:-1
position: 1199006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102689296
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102689296
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein phosphatase 10-like
translation: MCYSDETPGEESSESLPPRSGLVRSGPVASANEPASVDAVGGGPFSREGEGEMPAPALLEQEKEAHQCRKGVLIHCQAGVSRSATIVIAYLMKHSLMTMTDAYKYVKGRRPVISPNLNFMGQLLEFENDLNSGVTPRILTPKLTGVETEV
SIO_010081: LOC102689296
subclass of: SO_0000673
so part of: LOC102689296
location: complement(join(1198741..1199006,1204482..1204668))
location: region:1198741-1204668:-1
so has part: feature:1204482-1204668:-1:exon
so has part: feature:1198741-1199006:-1:exon

XP_006642877.1
type: Protein
SIO_000068: ncbiprotein

position:1198741:-1
position: 1198741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1204482-1204668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1198741-1199006:-1:exon

LOC102695370
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102695370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1210305..1219098
location: region:1210305-1219098:1
so has part: feature:1210305-1219098:1:exon
subclass of: SO_0000010

102695370
type: Gene
SIO_000068: ncbigene

position:1210305:1
position: 1210305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1219098:1
position: 1219098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1210305-1219098:1:exon

LOC102695370
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102695370
product: uncharacterized LOC102695370
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338774.1
SIO_010081: LOC102695370
subclass of: SO_0000673
so part of: LOC102695370
location: join(1210305..1210547,1211918..1212085,1212378..1212477,1212934..1212984,1213497..1213701,1214117..1214248,1214790..1214977,1215366..1215562,1215817..1215908,1216367..1216519,1217676..1217813,1217952..1218199,1218656..1219098)
location: region:1210305-1219098:1
so has part: feature:1210305-1210547:1:exon
so has part: feature:1211918-1212085:1:exon
so has part: feature:1212378-1212477:1:exon
so has part: feature:1212934-1212984:1:exon
so has part: feature:1213497-1213701:1:exon
so has part: feature:1214117-1214248:1:exon
so has part: feature:1214790-1214977:1:exon
so has part: feature:1215366-1215562:1:exon
so has part: feature:1215817-1215908:1:exon
so has part: feature:1216367-1216519:1:exon
so has part: feature:1217676-1217813:1:exon
so has part: feature:1217952-1218199:1:exon
so has part: feature:1218656-1219098:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1210305-1210547:1:exon

position:1210547:1
position: 1210547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1211918-1212085:1:exon

position:1211918:1
position: 1211918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1212085:1
position: 1212085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1212378-1212477:1:exon

position:1212378:1
position: 1212378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1212477:1
position: 1212477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1212934-1212984:1:exon

position:1212934:1
position: 1212934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1212984:1
position: 1212984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1213497-1213701:1:exon

position:1213497:1
position: 1213497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1213701:1
position: 1213701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1214117-1214248:1:exon

position:1214117:1
position: 1214117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1214248:1
position: 1214248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1214790-1214977:1:exon

position:1214790:1
position: 1214790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1214977:1
position: 1214977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1215366-1215562:1:exon

position:1215366:1
position: 1215366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215562:1
position: 1215562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1215817-1215908:1:exon

position:1215817:1
position: 1215817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215908:1
position: 1215908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1216367-1216519:1:exon

position:1216367:1
position: 1216367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1216519:1
position: 1216519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1217676-1217813:1:exon

position:1217676:1
position: 1217676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217813:1
position: 1217813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1217952-1218199:1:exon

position:1217952:1
position: 1217952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218199:1
position: 1218199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1218656-1219098:1:exon

position:1218656:1
position: 1218656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102695370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102695370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102695370
translation: MGDLAFYVVFGTEERPRKLWSDGACGQFSVGVPAVPPELLVVFGCGEWAPGGAEVAVELRGPGEEALPLGKLTPHCRCLLWEPGRSADWEKWASKMGSSGLSLRLRVQGEEDSARAGQQGSQEPTTEATTTPPSGRAKRKRGQLGWEEGQGQENVPPSVPPAEAQRRVRSHPRPGHTRPFTPVQPCRPEGKSKAPACGAEPSGRWGHTLCPIGSQTAILIGGQGSRMQFCKDPMWKLCTEDLSWVAAETIADGPTPDCRIGHTATFDPEKKRIYVFGGSKNKKWFNDVHILDTVSWRWTMVEAQGKVPPLAYHTCSLFRGELFVLGGVFPRPHPEPDGCSDSLYIFNPELGIWYQPIVLGDRPAPRSGHSACVIRGKIYIFGGWDTPICYNDTHALDLGLMEFSAVEVRGAPPSPRRYNCTLCFFFVFFLVVVPNQKCQLQSPQYQEQMKCRSVVDSCGALRVQVSGGQLWGSESAGQWWTVGDSGGQLCGSESAGQWWTLGDSGGQWWGTESYGQWGTVVDVPFRPGTVPGRSRCWGLTVRTPSLAESSTWTAIVHPLLTATPRAGHTIVALGGAEQDPADPEGPEGPEPRPHALLVFGGGDNEGAFFSDRLTLKIDELLGQ
SIO_010081: LOC102695370
subclass of: SO_0000673
so part of: LOC102695370
location: join(1210486..1210547,1211918..1212085,1212378..1212477,1212934..1212984,1213497..1213701,1214117..1214248,1214790..1214977,1215366..1215562,1215817..1215908,1216367..1216519,1217676..1217813,1217952..1218199,1218656..1218793)
location: region:1210486-1218793:1
so has part: feature:1210486-1210547:1:exon
so has part: feature:1211918-1212085:1:exon
so has part: feature:1212378-1212477:1:exon
so has part: feature:1212934-1212984:1:exon
so has part: feature:1213497-1213701:1:exon
so has part: feature:1214117-1214248:1:exon
so has part: feature:1214790-1214977:1:exon
so has part: feature:1215366-1215562:1:exon
so has part: feature:1215817-1215908:1:exon
so has part: feature:1216367-1216519:1:exon
so has part: feature:1217676-1217813:1:exon
so has part: feature:1217952-1218199:1:exon
so has part: feature:1218656-1218793:1:exon

XP_015194260.1
type: Protein
SIO_000068: ncbiprotein

position:1210486:1
position: 1210486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218793:1
position: 1218793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1210486-1210547:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1211918-1212085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1212378-1212477:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1212934-1212984:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1213497-1213701:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1214117-1214248:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1214790-1214977:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1215366-1215562:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1215817-1215908:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1216367-1216519:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1217676-1217813:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1217952-1218199:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1218656-1218793:1:exon

mark2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: mark2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1239348..1261623
location: region:1239348-1261623:1
so has part: feature:1239348-1261623:1:exon
subclass of: SO_0000010

102689704
type: Gene
SIO_000068: ncbigene

position:1239348:1
position: 1239348
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1261623:1
position: 1261623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239348-1261623:1:exon

mark2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mark2
product: MAP/microtubule affinity-regulating kinase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015338775.1
SIO_010081: mark2
subclass of: SO_0000673
so part of: mark2
location: join(<1239348..1239479,1242140..1242188,1243142..1243207,1243362..1243432,1243757..1243813,1244097..1244333,1245527..1245646,1245930..1246032,1246235..1246347,1246589..1246721,1246846..1247012,1247253..1247350,1251422..1251685,1257058..1257102,1259665..1261623)
location: region:1239348-1261623:1
so has part: feature:1239348-1239479:1:exon
so has part: feature:1242140-1242188:1:exon
so has part: feature:1243142-1243207:1:exon
so has part: feature:1243362-1243432:1:exon
so has part: feature:1243757-1243813:1:exon
so has part: feature:1244097-1244333:1:exon
so has part: feature:1245527-1245646:1:exon
so has part: feature:1245930-1246032:1:exon
so has part: feature:1246235-1246347:1:exon
so has part: feature:1246589-1246721:1:exon
so has part: feature:1246846-1247012:1:exon
so has part: feature:1247253-1247350:1:exon
so has part: feature:1251422-1251685:1:exon
so has part: feature:1257058-1257102:1:exon
so has part: feature:1259665-1261623:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1239348-1239479:1:exon

position:1239479:1
position: 1239479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1242140-1242188:1:exon

position:1242140:1
position: 1242140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1242188:1
position: 1242188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1243142-1243207:1:exon

position:1243142:1
position: 1243142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243207:1
position: 1243207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1243362-1243432:1:exon

position:1243362:1
position: 1243362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243432:1
position: 1243432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1243757-1243813:1:exon

position:1243757:1
position: 1243757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243813:1
position: 1243813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1244097-1244333:1:exon

position:1244097:1
position: 1244097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244333:1
position: 1244333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1245527-1245646:1:exon

position:1245527:1
position: 1245527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245646:1
position: 1245646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1245930-1246032:1:exon

position:1245930:1
position: 1245930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246032:1
position: 1246032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1246235-1246347:1:exon

position:1246235:1
position: 1246235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246347:1
position: 1246347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1246589-1246721:1:exon

position:1246589:1
position: 1246589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246721:1
position: 1246721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1246846-1247012:1:exon

position:1246846:1
position: 1246846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1247012:1
position: 1247012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1247253-1247350:1:exon

position:1247253:1
position: 1247253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1247350:1
position: 1247350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1251422-1251685:1:exon

position:1251422:1
position: 1251422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251685:1
position: 1251685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1257058-1257102:1:exon

position:1257058:1
position: 1257058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1257102:1
position: 1257102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1259665-1261623:1:exon

position:1259665:1
position: 1259665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mark2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mark2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase MARK2
translation: TEPCEGVPRTECLELSSNPLYVPPFQVAVKIIDKTQLNSSSLQKLFREVRIMKLLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKCIVHRDLKAENLLLDADMNIKIADFGFSNEFTLGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPAKRGSLEQQIMKDRWMNVGHEDEELKPYLEPEPDYKDPKRTEVMIQMGYTQEEIQDSLVNQKYNEIMATYLLLDYRTSELDDGGNLSIKPRPGSDLTNSNVQSPPHKVQRSVSSQKPRRQADQGSSVSSSSSKRSQSGASDTKHHSEDTGRKGSGSSAKVPASPLTPADRKKGTPTPSTNSILSTGTSRSRNSPLMERATLGQGTVQNGKDSTAPQRVPAASPSAHNISSAAVTDRTNFPRGVASRSTFHAGQQRATRDQHAGAYNGPPASPSLSHGNSQARRGGASGIFSKFTSKFVRRNPYEGENKDLDDGSRPMLSSGSAEKEKEKDENSRDPKDSKPRSLRFTWSMKTTSSMEPGEMMKEIRKVLESNSCAYELRERYMLLCVAGSPARDDYVQWEMEVCKLPRLSLNGVRFKRISGSSIAFKNIASKVANELKL
SIO_010081: mark2
subclass of: SO_0000673
so part of: mark2
location: join(<1239348..1239479,1242140..1242188,1243142..1243207,1243362..1243432,1243757..1243813,1244097..1244333,1245527..1245646,1245930..1246032,1246235..1246347,1246589..1246721,1246846..1247012,1247253..1247350,1251422..1251685,1257058..1257102,1259665..1260040)
location: region:1239348-1260040:1
so has part: feature:1239348-1239479:1:exon
so has part: feature:1242140-1242188:1:exon
so has part: feature:1243142-1243207:1:exon
so has part: feature:1243362-1243432:1:exon
so has part: feature:1243757-1243813:1:exon
so has part: feature:1244097-1244333:1:exon
so has part: feature:1245527-1245646:1:exon
so has part: feature:1245930-1246032:1:exon
so has part: feature:1246235-1246347:1:exon
so has part: feature:1246589-1246721:1:exon
so has part: feature:1246846-1247012:1:exon
so has part: feature:1247253-1247350:1:exon
so has part: feature:1251422-1251685:1:exon
so has part: feature:1257058-1257102:1:exon
so has part: feature:1259665-1260040:1:exon

XP_015194261.1
type: Protein
SIO_000068: ncbiprotein

position:1260040:1
position: 1260040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239348-1239479:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1242140-1242188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1243142-1243207:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1243362-1243432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1243757-1243813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1244097-1244333:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1245527-1245646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1245930-1246032:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1246235-1246347:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1246589-1246721:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1246846-1247012:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1247253-1247350:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1251422-1251685:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1257058-1257102:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1259665-1260040:1:exon

LOC102689905
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102689905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1260163..1271863)
location: region:1260163-1271863:-1
so has part: feature:1260163-1271863:-1:exon
subclass of: SO_0000010

102689905
type: Gene
SIO_000068: ncbigene

position:1260163:-1
position: 1260163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271863:-1
position: 1271863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1260163-1271863:-1:exon

LOC102689905
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102689905
product: REST corepressor 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015338776.1
SIO_010081: LOC102689905
subclass of: SO_0000673
so part of: LOC102689905
location: complement(join(1260163..1260362,1260438..1260680,1262464..1262659,1263407..1263478,1263579..1263814,1264217..1264274,1264372..1264449,1264535..1264759,1265801..1265867,1266623..1266747,1267099..1267260,1267400..1267452,1267732..1267812,1268195..1268251,1269377..1269500,1271264..1271344,1271668..1271863))
location: region:1260163-1271863:-1
so has part: feature:1271668-1271863:-1:exon
so has part: feature:1271264-1271344:-1:exon
so has part: feature:1269377-1269500:-1:exon
so has part: feature:1268195-1268251:-1:exon
so has part: feature:1267732-1267812:-1:exon
so has part: feature:1267400-1267452:-1:exon
so has part: feature:1267099-1267260:-1:exon
so has part: feature:1266623-1266747:-1:exon
so has part: feature:1265801-1265867:-1:exon
so has part: feature:1264535-1264759:-1:exon
so has part: feature:1264372-1264449:-1:exon
so has part: feature:1264217-1264274:-1:exon
so has part: feature:1263579-1263814:-1:exon
so has part: feature:1263407-1263478:-1:exon
so has part: feature:1262464-1262659:-1:exon
so has part: feature:1260438-1260680:-1:exon
so has part: feature:1260163-1260362:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1271668-1271863:-1:exon

position:1271668:-1
position: 1271668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1271264-1271344:-1:exon

position:1271264:-1
position: 1271264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271344:-1
position: 1271344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1269377-1269500:-1:exon

position:1269377:-1
position: 1269377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1269500:-1
position: 1269500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1268195-1268251:-1:exon

position:1268195:-1
position: 1268195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1268251:-1
position: 1268251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1267732-1267812:-1:exon

position:1267732:-1
position: 1267732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267812:-1
position: 1267812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1267400-1267452:-1:exon

position:1267400:-1
position: 1267400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267452:-1
position: 1267452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1267099-1267260:-1:exon

position:1267099:-1
position: 1267099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267260:-1
position: 1267260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1266623-1266747:-1:exon

position:1266623:-1
position: 1266623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1266747:-1
position: 1266747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1265801-1265867:-1:exon

position:1265801:-1
position: 1265801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1265867:-1
position: 1265867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1264535-1264759:-1:exon