Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG26, LepOcu1, whole genome shotgun sequence.
type: Entry
definition: Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG26, LepOcu1, whole genome shotgun sequence.
sequence version: NC_023204.1
sequence date: 2016-01-08
sequence: sequence
division: CON
label: NC_023204.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA221149
dblink: SAMN00706774
keyword: WGS
keyword: RefSeq
source: Lepisosteus oculatus (spotted gar)
organism: Lepisosteus oculatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM001429.1.\nAssembly name: LepOcu1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Broad Institute on\n2012/01/13. The original whole-genome shotgun project has the\naccession AHAT00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Broad Institute\nAssembly Method :: AllPaths v. R38293\nAssembly Name :: LepOcu1\nGenome Coverage :: 677.5x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Lepisosteus oculatus Annotation\n Release 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 6.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000018
sequence length: 13772684
topology: linear
so has quality: SO_0000987
location: 1..13772684
location: region:1-13772684:1
RO_0002162: 7918

NC_023204
type: RefSeq
SIO_000068: refseq

PRJNA221149
type: BioProject
SIO_000068: bioproject

SAMN00706774
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13772684:1
position: 13772684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-13772684:1:source
so part of: sequence
organism: Lepisosteus oculatus
mol type: genomic DNA
isolate: Spotted Gar 1
sex: female
country: USA: Bayou Chevreuil, St. James Parish, Louisiana
lat lon: 29.91 N 90.80 W
linkage group: LG26

7918
type: Taxonomy
SIO_000068: taxonomy

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 7918
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 4693136..4693235
location: region:4693136-4693235:1
so has part: feature:4693136-4693235:1:region

position:4693136:1
position: 4693136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4693235:1
position: 4693235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4693136-4693235:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 7918
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 4702184..4702283
location: region:4702184-4702283:1
so has part: feature:4702184-4702283:1:region

position:4702184:1
position: 4702184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4702283:1
position: 4702283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4702184-4702283:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 7918
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 11096667..11096766
location: region:11096667-11096766:1
so has part: feature:11096667-11096766:1:region

position:11096667:1
position: 11096667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11096766:1
position: 11096766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11096667-11096766:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 7918
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 11529110..11529209
location: region:11529110-11529209:1
so has part: feature:11529110-11529209:1:region

position:11529110:1
position: 11529110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11529209:1
position: 11529209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11529110-11529209:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 7918
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 12959238..12959337
location: region:12959238-12959337:1
so has part: feature:12959238-12959337:1:region

position:12959238:1
position: 12959238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12959337:1
position: 12959337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12959238-12959337:1:region

treh
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: treh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2092..13842)
location: region:2092-13842:-1
so has part: feature:2092-13842:-1:exon
subclass of: SO_0000010

102695430
type: Gene
SIO_000068: ncbigene

position:2092:-1
position: 2092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13842:-1
position: 13842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2092-13842:-1:exon

treh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: treh
product: trehalase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_006642180.2
SIO_010081: treh
subclass of: SO_0000673
so part of: treh
location: complement(join(2092..2974,3299..3352,3542..3654,4428..4539,4719..4936,5012..5200,7023..7072,7666..7788,8395..8511,9389..9481,9669..9769,9851..9938,10288..10435,10825..10925,13544..13842))
location: region:2092-13842:-1
so has part: feature:13544-13842:-1:exon
so has part: feature:10825-10925:-1:exon
so has part: feature:10288-10435:-1:exon
so has part: feature:9851-9938:-1:exon
so has part: feature:9669-9769:-1:exon
so has part: feature:9389-9481:-1:exon
so has part: feature:8395-8511:-1:exon
so has part: feature:7666-7788:-1:exon
so has part: feature:7023-7072:-1:exon
so has part: feature:5012-5200:-1:exon
so has part: feature:4719-4936:-1:exon
so has part: feature:4428-4539:-1:exon
so has part: feature:3542-3654:-1:exon
so has part: feature:3299-3352:-1:exon
so has part: feature:2092-2974:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13544-13842:-1:exon

position:13544:-1
position: 13544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10825-10925:-1:exon

position:10825:-1
position: 10825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10925:-1
position: 10925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10288-10435:-1:exon

position:10288:-1
position: 10288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10435:-1
position: 10435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9851-9938:-1:exon

position:9851:-1
position: 9851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9938:-1
position: 9938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9669-9769:-1:exon

position:9669:-1
position: 9669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9769:-1
position: 9769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9389-9481:-1:exon

position:9389:-1
position: 9389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9481:-1
position: 9481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8395-8511:-1:exon

position:8395:-1
position: 8395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8511:-1
position: 8511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7666-7788:-1:exon

position:7666:-1
position: 7666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7788:-1
position: 7788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7023-7072:-1:exon

position:7023:-1
position: 7023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7072:-1
position: 7072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5012-5200:-1:exon

position:5012:-1
position: 5012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5200:-1
position: 5200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4719-4936:-1:exon

position:4719:-1
position: 4719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4936:-1
position: 4936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4428-4539:-1:exon

position:4428:-1
position: 4428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4539:-1
position: 4539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3542-3654:-1:exon

position:3542:-1
position: 3542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3654:-1
position: 3654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3299-3352:-1:exon

position:3299:-1
position: 3299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3352:-1
position: 3352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2092-2974:-1:exon

position:2974:-1
position: 2974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

treh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: treh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trehalase
translation: MDWALLWTCCLALLPVLRCALPPPCDSEIYCMGEILRQVQLARLFDDDKHFVDMKLKEPPERVLQSFWNLTSRVPGGNLPASQLRKFLEDFFEEPGTEFEPWTPADWHSKPRFLSKIADGRLRRWAKELHQLWKSLGRKVRPDVRVHPELYSLIYTPNPLIVPGGRFRELYYWDSYWVINGLLLSEMQDTARGMIENFLHLVDKYGFVPNGGRVYFERRSQPPFLTLMVESYYRASQDKAFLRTALPILEKEYAFWMQNRSVVLEAAGSRHTLNRYSVEVGQPRPESYTDDLDLAQGLTPEARDRLWMELKAGAESGWDFSSRWFINGSGALRDTHTSAILPADLNALLCRIERTLATFYRALGNSTAARKYDIALERRVKAVRALLWNEERGAWFDYNLLTNASHLAFFPSNMAPLWAQCYSEPSAGERALRYLQSSPASRFPSGLPTSLTDSGQQWDLPNAWPPLQHMVIEGLTRLTSESAEQTAFDLAQRWIRTNWEAYGKHKAMFEKYDVLGDGTPGGGGEYEVQLGFGWTNGVALQLLDRFGDRLSSGGAQALSSGLGVGLLCAALRFLL
SIO_010081: treh
subclass of: SO_0000673
so part of: treh
location: complement(join(2834..2974,3299..3352,3542..3654,4428..4539,4719..4936,5012..5200,7023..7072,7666..7788,8395..8511,9389..9481,9669..9769,9851..9938,10288..10435,10825..10925,13544..13623))
location: region:2834-13623:-1
so has part: feature:13544-13623:-1:exon
so has part: feature:10825-10925:-1:exon
so has part: feature:10288-10435:-1:exon
so has part: feature:9851-9938:-1:exon
so has part: feature:9669-9769:-1:exon
so has part: feature:9389-9481:-1:exon
so has part: feature:8395-8511:-1:exon
so has part: feature:7666-7788:-1:exon
so has part: feature:7023-7072:-1:exon
so has part: feature:5012-5200:-1:exon
so has part: feature:4719-4936:-1:exon
so has part: feature:4428-4539:-1:exon
so has part: feature:3542-3654:-1:exon
so has part: feature:3299-3352:-1:exon
so has part: feature:2834-2974:-1:exon

XP_006642243.2
type: Protein
SIO_000068: ncbiprotein

position:2834:-1
position: 2834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13623:-1
position: 13623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13544-13623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10825-10925:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10288-10435:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9851-9938:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9669-9769:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9389-9481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8395-8511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7666-7788:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7023-7072:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5012-5200:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4719-4936:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4428-4539:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3542-3654:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3299-3352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2834-2974:-1:exon

ddx6
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ddx6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(16799..30249)
location: region:16799-30249:-1
so has part: feature:16799-30249:-1:exon
subclass of: SO_0000010

102688279
type: Gene
SIO_000068: ncbigene

position:16799:-1
position: 16799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30249:-1
position: 30249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16799-30249:-1:exon

ddx6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ddx6
product: DEAD (Asp-Glu-Ala-Asp) box helicase 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006642142.2
SIO_010081: ddx6
subclass of: SO_0000673
so part of: ddx6
location: complement(join(16799..18804,18970..19149,19659..19760,20356..20419,20924..21040,21357..21485,21875..21997,22828..22922,23042..23188,23613..23742,24096..24200,25743..25806,27506..28169,29945..30249))
location: region:16799-30249:-1
so has part: feature:29945-30249:-1:exon
so has part: feature:27506-28169:-1:exon
so has part: feature:25743-25806:-1:exon
so has part: feature:24096-24200:-1:exon
so has part: feature:23613-23742:-1:exon
so has part: feature:23042-23188:-1:exon
so has part: feature:22828-22922:-1:exon
so has part: feature:21875-21997:-1:exon
so has part: feature:21357-21485:-1:exon
so has part: feature:20924-21040:-1:exon
so has part: feature:20356-20419:-1:exon
so has part: feature:19659-19760:-1:exon
so has part: feature:18970-19149:-1:exon
so has part: feature:16799-18804:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29945-30249:-1:exon

position:29945:-1
position: 29945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27506-28169:-1:exon

position:27506:-1
position: 27506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28169:-1
position: 28169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:25743-25806:-1:exon

position:25743:-1
position: 25743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25806:-1
position: 25806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:24096-24200:-1:exon

position:24096:-1
position: 24096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24200:-1
position: 24200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:23613-23742:-1:exon

position:23613:-1
position: 23613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23742:-1
position: 23742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:23042-23188:-1:exon

position:23042:-1
position: 23042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23188:-1
position: 23188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:22828-22922:-1:exon

position:22828:-1
position: 22828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22922:-1
position: 22922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:21875-21997:-1:exon

position:21875:-1
position: 21875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21997:-1
position: 21997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:21357-21485:-1:exon

position:21357:-1
position: 21357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21485:-1
position: 21485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:20924-21040:-1:exon

position:20924:-1
position: 20924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21040:-1
position: 21040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:20356-20419:-1:exon

position:20356:-1
position: 20356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20419:-1
position: 20419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:19659-19760:-1:exon

position:19659:-1
position: 19659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19760:-1
position: 19760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:18970-19149:-1:exon

position:18970:-1
position: 18970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19149:-1
position: 19149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:16799-18804:-1:exon

position:18804:-1
position: 18804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ddx6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ddx6
product: DEAD (Asp-Glu-Ala-Asp) box helicase 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015337558.1
SIO_010081: ddx6
subclass of: SO_0000673
so part of: ddx6
location: complement(join(16799..18804,18970..19149,19659..19760,20356..20419,20924..21040,21357..21485,21875..21997,22828..22922,23042..23188,23613..23742,24096..24200,25743..25806,27506..28169,29543..29748))
location: region:16799-29748:-1
so has part: feature:29543-29748:-1:exon
so has part: feature:27506-28169:-1:exon
so has part: feature:25743-25806:-1:exon
so has part: feature:24096-24200:-1:exon
so has part: feature:23613-23742:-1:exon
so has part: feature:23042-23188:-1:exon
so has part: feature:22828-22922:-1:exon
so has part: feature:21875-21997:-1:exon
so has part: feature:21357-21485:-1:exon
so has part: feature:20924-21040:-1:exon
so has part: feature:20356-20419:-1:exon
so has part: feature:19659-19760:-1:exon
so has part: feature:18970-19149:-1:exon
so has part: feature:16799-18804:-1:exon

position:29748:-1
position: 29748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29543-29748:-1:exon

position:29543:-1
position: 29543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27506-28169:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25743-25806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24096-24200:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23613-23742:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23042-23188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22828-22922:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:21875-21997:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:21357-21485:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:20924-21040:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:20356-20419:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:19659-19760:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:18970-19149:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:16799-18804:-1:exon

ddx6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ddx6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX6
translation: MSTARTENPVILGLSSQNGQIRGPVKPAGGPGGGGGGPPSQPSGQMKTSSAINNGSSQLLPPANTAIKPGDDWKKNLKLPPKDMRMKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKRDCIQAVVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVGQVQMIVLDEADKLLSQDFVQMMEEILSTLPKNRQILLYSATFPLSVQKFMNAHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPGSIDKSLYVAEYHSESGEEAKL
SIO_010081: ddx6
subclass of: SO_0000673
so part of: ddx6
location: complement(join(18974..19149,19659..19760,20356..20419,20924..21040,21357..21485,21875..21997,22828..22922,23042..23188,23613..23742,24096..24200,25743..25806,27506..27708))
location: region:18974-27708:-1
so has part: feature:27506-27708:-1:exon
so has part: feature:25743-25806:-1:exon
so has part: feature:24096-24200:-1:exon
so has part: feature:23613-23742:-1:exon
so has part: feature:23042-23188:-1:exon
so has part: feature:22828-22922:-1:exon
so has part: feature:21875-21997:-1:exon
so has part: feature:21357-21485:-1:exon
so has part: feature:20924-21040:-1:exon
so has part: feature:20356-20419:-1:exon
so has part: feature:19659-19760:-1:exon
so has part: feature:18974-19149:-1:exon

XP_006642205.1
type: Protein
SIO_000068: ncbiprotein

position:18974:-1
position: 18974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27708:-1
position: 27708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27506-27708:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25743-25806:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24096-24200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23613-23742:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23042-23188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22828-22922:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:21875-21997:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:21357-21485:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:20924-21040:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:20356-20419:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:19659-19760:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:18974-19149:-1:exon

ddx6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ddx6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX6
translation: MSTARTENPVILGLSSQNGQIRGPVKPAGGPGGGGGGPPSQPSGQMKTSSAINNGSSQLLPPANTAIKPGDDWKKNLKLPPKDMRMKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKRDCIQAVVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVGQVQMIVLDEADKLLSQDFVQMMEEILSTLPKNRQILLYSATFPLSVQKFMNAHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPGSIDKSLYVAEYHSESGEEAKL
SIO_010081: ddx6
subclass of: SO_0000673
so part of: ddx6
location: complement(join(18974..19149,19659..19760,20356..20419,20924..21040,21357..21485,21875..21997,22828..22922,23042..23188,23613..23742,24096..24200,25743..25806,27506..27708))
location: region:18974-27708:-1
so has part: feature:27506-27708:-1:exon
so has part: feature:25743-25806:-1:exon
so has part: feature:24096-24200:-1:exon
so has part: feature:23613-23742:-1:exon
so has part: feature:23042-23188:-1:exon
so has part: feature:22828-22922:-1:exon
so has part: feature:21875-21997:-1:exon
so has part: feature:21357-21485:-1:exon
so has part: feature:20924-21040:-1:exon
so has part: feature:20356-20419:-1:exon
so has part: feature:19659-19760:-1:exon
so has part: feature:18974-19149:-1:exon

XP_015193044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27506-27708:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25743-25806:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24096-24200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23613-23742:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23042-23188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:22828-22922:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:21875-21997:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:21357-21485:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:20924-21040:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:20356-20419:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:19659-19760:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:18974-19149:-1:exon

cxcr5
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: cxcr5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 31835..42508
location: region:31835-42508:1
so has part: feature:31835-42508:1:exon
subclass of: SO_0000010

102695624
type: Gene
SIO_000068: ncbigene

position:31835:1
position: 31835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42508:1
position: 42508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31835-42508:1:exon

cxcr5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cxcr5
product: chemokine (C-X-C motif) receptor 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015337340.1
SIO_010081: cxcr5
subclass of: SO_0000673
so part of: cxcr5
location: join(31835..31981,32344..32423,41300..42508)
location: region:31835-42508:1
so has part: feature:31835-31981:1:exon
so has part: feature:32344-32423:1:exon
so has part: feature:41300-42508:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31835-31981:1:exon

position:31981:1
position: 31981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:32344-32423:1:exon

position:32344:1
position: 32344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32423:1
position: 32423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:41300-42508:1:exon

position:41300:1
position: 41300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cxcr5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cxcr5
product: chemokine (C-X-C motif) receptor 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015337339.1
SIO_010081: cxcr5
subclass of: SO_0000673
so part of: cxcr5
location: join(32299..32423,41300..42508)
location: region:32299-42508:1
so has part: feature:32299-32423:1:exon
so has part: feature:41300-42508:1:exon

position:32299:1
position: 32299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32299-32423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41300-42508:1:exon

cxcr5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cxcr5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-X-C chemokine receptor type 5
translation: MKQFYNTMPMSFELSLDDVSSLELGDYGINETEGNGTMDSGPFTCDGAAGEDAGLRLFHTVLLPLLYGAVLLLGLLGNGLLLAVLLRRRRGLRVTEVYLLHLALADLLLLLTLPFAMAHAGLGWLFGGFLCRAVGVAHRLNFLCSSLLLACIGFDRYLAIVHAVRSLQSRRLRAVHLTCACVWLLCLALSLPSAAFLSVEPARPNASRQACGFLSHGLHANNWLLTSRLLTHLLCFFLPLAVMLYCYSAVVATLRHSQRGLEKQGAIRLALLITLVFCLCWLPYNVSVLLETLGALGVLEQDCAGRRRLSQATGVTESLGYAHCCLNPLLYAFLGVRFRQDLRRLLASWGCPLGLCSCQDPHARGRERASRMSISEGGPTTSSSLI
SIO_010081: cxcr5
subclass of: SO_0000673
so part of: cxcr5
location: join(32385..32423,41300..42421)
location: region:32385-42421:1
so has part: feature:32385-32423:1:exon
so has part: feature:41300-42421:1:exon

XP_015192825.1
type: Protein
SIO_000068: ncbiprotein

position:32385:1
position: 32385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42421:1
position: 42421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32385-32423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41300-42421:1:exon

cxcr5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cxcr5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-X-C chemokine receptor type 5
translation: MKQFYNTMPMSFELSLDDVSSLELGDYGINETEGNGTMDSGPFTCDGAAGEDAGLRLFHTVLLPLLYGAVLLLGLLGNGLLLAVLLRRRRGLRVTEVYLLHLALADLLLLLTLPFAMAHAGLGWLFGGFLCRAVGVAHRLNFLCSSLLLACIGFDRYLAIVHAVRSLQSRRLRAVHLTCACVWLLCLALSLPSAAFLSVEPARPNASRQACGFLSHGLHANNWLLTSRLLTHLLCFFLPLAVMLYCYSAVVATLRHSQRGLEKQGAIRLALLITLVFCLCWLPYNVSVLLETLGALGVLEQDCAGRRRLSQATGVTESLGYAHCCLNPLLYAFLGVRFRQDLRRLLASWGCPLGLCSCQDPHARGRERASRMSISEGGPTTSSSLI
SIO_010081: cxcr5
subclass of: SO_0000673
so part of: cxcr5
location: join(32385..32423,41300..42421)
location: region:32385-42421:1
so has part: feature:32385-32423:1:exon
so has part: feature:41300-42421:1:exon

XP_015192826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32385-32423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41300-42421:1:exon

bcl9l
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: bcl9l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(46867..71531)
location: region:46867-71531:-1
so has part: feature:46867-71531:-1:exon
subclass of: SO_0000010

102696225
type: Gene
SIO_000068: ncbigene

position:46867:-1
position: 46867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71531:-1
position: 71531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46867-71531:-1:exon

bcl9l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: bcl9l
product: B-cell CLL/lymphoma 9-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015337352.1
SIO_010081: bcl9l
subclass of: SO_0000673
so part of: bcl9l
location: complement(join(46867..48905,49479..49532,49932..50186,50434..51794,53624..53902,54692..54875,56716..56835,58950..59350,60493..60596,69780..71531))
location: region:46867-71531:-1
so has part: feature:69780-71531:-1:exon
so has part: feature:60493-60596:-1:exon
so has part: feature:58950-59350:-1:exon
so has part: feature:56716-56835:-1:exon
so has part: feature:54692-54875:-1:exon
so has part: feature:53624-53902:-1:exon
so has part: feature:50434-51794:-1:exon
so has part: feature:49932-50186:-1:exon
so has part: feature:49479-49532:-1:exon
so has part: feature:46867-48905:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:69780-71531:-1:exon

position:69780:-1
position: 69780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:60493-60596:-1:exon

position:60493:-1
position: 60493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60596:-1
position: 60596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:58950-59350:-1:exon

position:58950:-1
position: 58950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59350:-1
position: 59350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:56716-56835:-1:exon

position:56716:-1
position: 56716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56835:-1
position: 56835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:54692-54875:-1:exon

position:54692:-1
position: 54692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54875:-1
position: 54875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:53624-53902:-1:exon

position:53624:-1
position: 53624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53902:-1
position: 53902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:50434-51794:-1:exon

position:50434:-1
position: 50434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51794:-1
position: 51794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:49932-50186:-1:exon

position:49932:-1
position: 49932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50186:-1
position: 50186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:49479-49532:-1:exon

position:49479:-1
position: 49479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49532:-1
position: 49532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:46867-48905:-1:exon

position:48905:-1
position: 48905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

bcl9l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: bcl9l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell CLL/lymphoma 9-like protein
translation: MHPDNKLTNHGKQVNSTAQSQLQNVIQQPGSACSLGSKGVGAGSHAAKANQISPGSSGLKSAVQAGVALGGPTKGKAKRERSVSADSGEQRDALTPALEPDAKEGVLRTKRRCVLEKKQPYSGDEWCSGADSDDDDKPPAAAHRERSLAGPAQPRPGPSPLGPLSESGSSSAGHGLGAGLHPELGSAPKPLQQVVYVFTTSLANSAAEAVVHGHADSILVFHQQNVPRTKLDQVSEGSPYNSCTGERGPLELLFEVLNIFLCPSLSVKHRLGVPHLSSSANRSGDRGGTPPTAFWDMYPGRRYEEPLPGLDEGLLLGPDGLSPEQAAWRRLQEEYFQEKRRQQDVPPHGHGHAHPRMMPEAGLVTRGPPPPYHSKPGEPQWPGPGAGGQGRLMEGPQDGPRGQRFLGSMQRGPPGAYPGAVLPMDSVGLQRPPRPGWLEDAPPSMGSGLPFQGCYPAPGPPQHLAGDPERLLLEKRPERVGKQAPVGGGGGYPRGDPMEFAGSRALLGSPGGGPAGDMAGSPLGGGLSMSMNVNMSLSLQSGGQQPAAPKLMLGPEEVSRLRAAQNGPGGGGKALPYPGQGPFSGYLPQDAGPDLFGPEQGVSPLGGTSRLSHLPLNPAGRGPGLGPRRPSDLSVSMNPMGSPSLAPPHHLKSPSVSQAPSPSAPGLKSPQLAGPPPPPPTTPSAGTPSLKSPQVVGPSSLGVLSPSGSPGRLKSPSVPVASPSWAASPKTTLPSPGGPPGGKAGGSGVDTGPPLPPRSSNSTPLSQPGSINPSMPFTSSPDAPPSQNPLSLIMSQMSKYAMPSNTPLYHDAIKTIATSDDEMMPDRPLLAAVSMADSPTGSQSGHPFRPREKRGGVGNHQPSQMHLGSQSPMGAVLPGQPPLSHDPAGSLLHPPSPMSVPGGGAPCSVSPMLPHNQLAGYPRLQAPPYPPAPAPEDALAHHHQLHLLGKGLGHAPAPLGEGPDLSEVIRPSATGIPEFDLSRIIPADKPSGTLQYFPRAEPSNPHLASLQSMMAEQPLPPHAHAGLRARAGMCAPPGHLMGRTAMGPPPGAQQQLHHGPHPAVLPPQQHQHGLMVMQPKQRGAPLPADLYAQQGPLMGPPHPQAGLLGPQSLRQRGMSLDSPLGYGPSSMANLPF
SIO_010081: bcl9l
subclass of: SO_0000673
so part of: bcl9l
location: complement(join(48058..48905,49479..49532,49932..50186,50434..51794,53624..53902,54692..54875,56716..56835,58950..59259))
location: region:48058-59259:-1
so has part: feature:58950-59259:-1:exon
so has part: feature:56716-56835:-1:exon
so has part: feature:54692-54875:-1:exon
so has part: feature:53624-53902:-1:exon
so has part: feature:50434-51794:-1:exon
so has part: feature:49932-50186:-1:exon
so has part: feature:49479-49532:-1:exon
so has part: feature:48058-48905:-1:exon

XP_015192838.1
type: Protein
SIO_000068: ncbiprotein

position:48058:-1
position: 48058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59259:-1
position: 59259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58950-59259:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56716-56835:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54692-54875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:53624-53902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50434-51794:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:49932-50186:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49479-49532:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:48058-48905:-1:exon

LOC107075637
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(77306..82175)
location: region:77306-82175:-1
so has part: feature:77306-82175:-1:exon
subclass of: SO_0000011

107075637
type: Gene
SIO_000068: ncbigene

position:77306:-1
position: 77306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82175:-1
position: 82175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77306-82175:-1:exon

LOC107075637
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075637
product: uncharacterized LOC107075637
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001477153.1
SIO_010081: LOC107075637
subclass of: SO_0000673
so part of: LOC107075637
location: complement(join(77306..77474,77573..77776,78532..78590,81588..82175))
location: region:77306-82175:-1
so has part: feature:81588-82175:-1:exon
so has part: feature:78532-78590:-1:exon
so has part: feature:77573-77776:-1:exon
so has part: feature:77306-77474:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81588-82175:-1:exon

position:81588:-1
position: 81588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:78532-78590:-1:exon

position:78532:-1
position: 78532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78590:-1
position: 78590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:77573-77776:-1:exon

position:77573:-1
position: 77573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77776:-1
position: 77776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:77306-77474:-1:exon

position:77474:-1
position: 77474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107075604
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 84680..102892
location: region:84680-102892:1
so has part: feature:84680-102892:1:exon
subclass of: SO_0000010

107075604
type: Gene
SIO_000068: ncbigene

position:84680:1
position: 84680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102892:1
position: 102892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84680-102892:1:exon

LOC107075604
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107075604
product: V-set and immunoglobulin domain-containing protein 10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015337341.1
SIO_010081: LOC107075604
subclass of: SO_0000673
so part of: LOC107075604
location: join(84680..85960,86610..86963,88372..88647,88811..89086,90156..90425,91305..91565,92204..92494,93997..94311,99695..99817,100585..100609,100907..101001,102702..102892)
location: region:84680-102892:1
so has part: feature:84680-85960:1:exon
so has part: feature:86610-86963:1:exon
so has part: feature:88372-88647:1:exon
so has part: feature:88811-89086:1:exon
so has part: feature:90156-90425:1:exon
so has part: feature:91305-91565:1:exon
so has part: feature:92204-92494:1:exon
so has part: feature:93997-94311:1:exon
so has part: feature:99695-99817:1:exon
so has part: feature:100585-100609:1:exon
so has part: feature:100907-101001:1:exon
so has part: feature:102702-102892:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84680-85960:1:exon

position:85960:1
position: 85960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:86610-86963:1:exon

position:86610:1
position: 86610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86963:1
position: 86963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88372-88647:1:exon

position:88372:1
position: 88372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88647:1
position: 88647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:88811-89086:1:exon

position:88811:1
position: 88811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89086:1
position: 89086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:90156-90425:1:exon

position:90156:1
position: 90156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90425:1
position: 90425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:91305-91565:1:exon

position:91305:1
position: 91305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91565:1
position: 91565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:92204-92494:1:exon

position:92204:1
position: 92204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92494:1
position: 92494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:93997-94311:1:exon

position:93997:1
position: 93997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94311:1
position: 94311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:99695-99817:1:exon

position:99695:1
position: 99695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99817:1
position: 99817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:100585-100609:1:exon

position:100585:1
position: 100585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100609:1
position: 100609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:100907-101001:1:exon

position:100907:1
position: 100907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101001:1
position: 101001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:102702-102892:1:exon

position:102702:1
position: 102702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107075604
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107075604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-set and immunoglobulin domain-containing protein 10-like
translation: MGGALAGAHVLSLTLCLLLGVLRGLEILSPGEVEYKRVLTKGVLGRSVVLECGSTLPSIYIWGFTLPGSEGTRALVYNYGQGPRLQKLASSLGEVSVVSASAALVIDRLPLAAEGLYTCQALYESQDGVRLSYFYIQLLVLVPVSKPSVRLSEPTPVESSAAWAQCGLENGTGPVQFEWEREGRGGVRAGVPEADGSLVNLTRVSRNHTGWYSCLARNEVNEQRSDRAWLDVIYGPDEPMINITPYAVTERGFSAVELETVSLLCQAPSNPPSQYVWFYNNSQVSAGQQFTISRILRMHTGYYTCLAQNSYLNTRTKATVTLTVYYLPDSSPTCAVLPASNYTGLLLWCSWEGGSPAAELRWTPSAPGGTGGEAEPTLSNATQIRAGAQTPDNSTFSCRATHPALRAAAQCNVTVVLPPGEPRCFAVATRNNEYLMLSCAWEGGAPRALLWWAAGDGAVLGSSEENANILVFKSSGTYSGKEFVCRAKHPLSAASRQCQLKLEAPVLVTQRSVVSVYEGSDVQLTCVLKATYPASEITWYNNQNQQVWDAPQKYLLHREASWSNLTVRETDGSRDSGQYWCSATNAVGGAQIPITLNVRRYPSPPNVTISKILYNSRQRTEIDLQWATQGSGDLTGFIVEQRLSRRSGAKPAPAGGAWETVAGQIEPQVREHKLGGLDPATQYAFRIIAVNHRTRGHPSEVKTPADPPFNAYPAVIGAAIAGMIVATVGTVLVFQYVVRNRADNPRLHNMFFGIQPAESRENISYPEDEQGPEAGEEGHTPASSTEEAPSGSSPPSQAPPPGDGNEPVNVTITVTATS
SIO_010081: LOC107075604
subclass of: SO_0000673
so part of: LOC107075604
location: join(85891..85960,86610..86963,88372..88647,88811..89086,90156..90425,91305..91565,92204..92494,93997..94311,99695..99817,100585..100609,100907..101001,102702..102802)
location: region:85891-102802:1
so has part: feature:85891-85960:1:exon
so has part: feature:86610-86963:1:exon
so has part: feature:88372-88647:1:exon
so has part: feature:88811-89086:1:exon
so has part: feature:90156-90425:1:exon
so has part: feature:91305-91565:1:exon
so has part: feature:92204-92494:1:exon
so has part: feature:93997-94311:1:exon
so has part: feature:99695-99817:1:exon
so has part: feature:100585-100609:1:exon
so has part: feature:100907-101001:1:exon
so has part: feature:102702-102802:1:exon

XP_015192827.1
type: Protein
SIO_000068: ncbiprotein

position:85891:1
position: 85891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102802:1
position: 102802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85891-85960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86610-86963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88372-88647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88811-89086:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90156-90425:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91305-91565:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:92204-92494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:93997-94311:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:99695-99817:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:100585-100609:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:100907-101001:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:102702-102802:1:exon

cdon
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: cdon
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(109002..144399)
location: region:109002-144399:-1
so has part: feature:109002-144399:-1:exon
subclass of: SO_0000010

102696609
type: Gene
SIO_000068: ncbigene

position:109002:-1
position: 109002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144399:-1
position: 144399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109002-144399:-1:exon

cdon
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cdon
product: cell adhesion associated, oncogene regulated, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015337532.1
SIO_010081: cdon
subclass of: SO_0000673
so part of: cdon
location: complement(join(109002..109473,110619..110866,111899..111978,112104..112291,112366..112587,112750..112872,115476..115581,116216..116397,116747..116953,118660..118785,119362..119536,120217..120494,122478..122747,122949..123248,123339..123482,123697..123843,124172..124450,124646..124767,143849..144047))
location: region:109002-144047:-1
so has part: feature:143849-144047:-1:exon
so has part: feature:124646-124767:-1:exon
so has part: feature:124172-124450:-1:exon
so has part: feature:123697-123843:-1:exon
so has part: feature:123339-123482:-1:exon
so has part: feature:122949-123248:-1:exon
so has part: feature:122478-122747:-1:exon
so has part: feature:120217-120494:-1:exon
so has part: feature:119362-119536:-1:exon
so has part: feature:118660-118785:-1:exon
so has part: feature:116747-116953:-1:exon
so has part: feature:116216-116397:-1:exon
so has part: feature:115476-115581:-1:exon
so has part: feature:112750-112872:-1:exon
so has part: feature:112366-112587:-1:exon
so has part: feature:112104-112291:-1:exon
so has part: feature:111899-111978:-1:exon
so has part: feature:110619-110866:-1:exon
so has part: feature:109002-109473:-1:exon

position:144047:-1
position: 144047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143849-144047:-1:exon

position:143849:-1
position: 143849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124646-124767:-1:exon

position:124646:-1
position: 124646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124767:-1
position: 124767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:124172-124450:-1:exon

position:124172:-1
position: 124172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124450:-1
position: 124450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:123697-123843:-1:exon

position:123697:-1
position: 123697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123843:-1
position: 123843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:123339-123482:-1:exon

position:123339:-1
position: 123339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123482:-1
position: 123482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:122949-123248:-1:exon

position:122949:-1
position: 122949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123248:-1
position: 123248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:122478-122747:-1:exon

position:122478:-1
position: 122478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122747:-1
position: 122747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:120217-120494:-1:exon

position:120217:-1
position: 120217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120494:-1
position: 120494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:119362-119536:-1:exon

position:119362:-1
position: 119362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119536:-1
position: 119536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:118660-118785:-1:exon

position:118660:-1
position: 118660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118785:-1
position: 118785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:116747-116953:-1:exon

position:116747:-1
position: 116747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116953:-1
position: 116953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:116216-116397:-1:exon

position:116216:-1
position: 116216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116397:-1
position: 116397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:115476-115581:-1:exon

position:115476:-1
position: 115476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115581:-1
position: 115581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:112750-112872:-1:exon

position:112750:-1
position: 112750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112872:-1
position: 112872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:112366-112587:-1:exon

position:112366:-1
position: 112366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112587:-1
position: 112587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:112104-112291:-1:exon

position:112104:-1
position: 112104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112291:-1
position: 112291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:111899-111978:-1:exon

position:111899:-1
position: 111899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111978:-1
position: 111978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:110619-110866:-1:exon

position:110619:-1
position: 110619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110866:-1
position: 110866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:109002-109473:-1:exon

position:109473:-1
position: 109473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cdon
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cdon
product: cell adhesion associated, oncogene regulated, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015337529.1
SIO_010081: cdon
subclass of: SO_0000673
so part of: cdon
location: complement(join(109003..109473,110619..110866,111899..111978,112104..112291,112366..112587,112750..112872,115476..115581,116216..116397,116747..116953,118660..118785,119362..119536,120217..120494,122478..122747,122949..123248,123339..123482,123697..123843,124172..124450,124646..124767,144065..144399))
location: region:109003-144399:-1
so has part: feature:144065-144399:-1:exon
so has part: feature:124646-124767:-1:exon
so has part: feature:124172-124450:-1:exon
so has part: feature:123697-123843:-1:exon
so has part: feature:123339-123482:-1:exon
so has part: feature:122949-123248:-1:exon
so has part: feature:122478-122747:-1:exon
so has part: feature:120217-120494:-1:exon
so has part: feature:119362-119536:-1:exon
so has part: feature:118660-118785:-1:exon
so has part: feature:116747-116953:-1:exon
so has part: feature:116216-116397:-1:exon
so has part: feature:115476-115581:-1:exon
so has part: feature:112750-112872:-1:exon
so has part: feature:112366-112587:-1:exon
so has part: feature:112104-112291:-1:exon
so has part: feature:111899-111978:-1:exon
so has part: feature:110619-110866:-1:exon
so has part: feature:109003-109473:-1:exon

position:109003:-1
position: 109003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144065-144399:-1:exon

position:144065:-1
position: 144065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124646-124767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:124172-124450:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123697-123843:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:123339-123482:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122949-123248:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:122478-122747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120217-120494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:119362-119536:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118660-118785:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116747-116953:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:116216-116397:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:115476-115581:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:112750-112872:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:112366-112587:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:112104-112291:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:111899-111978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:110619-110866:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:109003-109473:-1:exon

cdon
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cdon
product: cell adhesion associated, oncogene regulated, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015337530.1
SIO_010081: cdon
subclass of: SO_0000673
so part of: cdon
location: complement(join(109003..109473,110619..110866,111899..111978,112104..112291,112366..112587,112750..112872,115476..115581,116216..116397,116747..116953,118660..118785,119362..119536,120217..120494,122478..122747,122949..123248,123339..123482,123697..123843,124172..124450,124646..124770,144065..144399))
location: region:109003-144399:-1
so has part: feature:144065-144399:-1:exon
so has part: feature:124646-124770:-1:exon
so has part: feature:124172-124450:-1:exon
so has part: feature:123697-123843:-1:exon
so has part: feature:123339-123482:-1:exon
so has part: feature:122949-123248:-1:exon
so has part: feature:122478-122747:-1:exon
so has part: feature:120217-120494:-1:exon
so has part: feature:119362-119536:-1:exon
so has part: feature:118660-118785:-1:exon
so has part: feature:116747-116953:-1:exon
so has part: feature:116216-116397:-1:exon
so has part: feature:115476-115581:-1:exon
so has part: feature:112750-112872:-1:exon
so has part: feature:112366-112587:-1:exon
so has part: feature:112104-112291:-1:exon
so has part: feature:111899-111978:-1:exon
so has part: feature:110619-110866:-1:exon
so has part: feature:109003-109473:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144065-144399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124646-124770:-1:exon

position:124770:-1
position: 124770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:124172-124450:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123697-123843:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:123339-123482:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122949-123248:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:122478-122747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120217-120494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:119362-119536:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118660-118785:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116747-116953:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:116216-116397:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:115476-115581:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:112750-112872:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:112366-112587:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:112104-112291:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:111899-111978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:110619-110866:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:109003-109473:-1:exon

cdon
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cdon
product: cell adhesion associated, oncogene regulated, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015337528.1
SIO_010081: cdon
subclass of: SO_0000673
so part of: cdon
location: complement(join(109003..109473,110619..110866,111899..111978,112104..112291,112366..112587,112750..112872,115476..115581,116216..116397,116747..116953,118660..118785,119362..119536,120217..120494,122478..122747,122949..123248,123339..123482,123697..123843,124172..124450,124646..124767,141542..141657))
location: region:109003-141657:-1
so has part: feature:141542-141657:-1:exon
so has part: feature:124646-124767:-1:exon
so has part: feature:124172-124450:-1:exon
so has part: feature:123697-123843:-1:exon
so has part: feature:123339-123482:-1:exon
so has part: feature:122949-123248:-1:exon
so has part: feature:122478-122747:-1:exon
so has part: feature:120217-120494:-1:exon
so has part: feature:119362-119536:-1:exon
so has part: feature:118660-118785:-1:exon
so has part: feature:116747-116953:-1:exon
so has part: feature:116216-116397:-1:exon
so has part: feature:115476-115581:-1:exon
so has part: feature:112750-112872:-1:exon
so has part: feature:112366-112587:-1:exon
so has part: feature:112104-112291:-1:exon
so has part: feature:111899-111978:-1:exon
so has part: feature:110619-110866:-1:exon
so has part: feature:109003-109473:-1:exon

position:141657:-1
position: 141657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141542-141657:-1:exon

position:141542:-1
position: 141542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124646-124767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:124172-124450:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123697-123843:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:123339-123482:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122949-123248:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:122478-122747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120217-120494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:119362-119536:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118660-118785:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116747-116953:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:116216-116397:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:115476-115581:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:112750-112872:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:112366-112587:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:112104-112291:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:111899-111978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:110619-110866:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:109003-109473:-1:exon

cdon
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cdon
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X1
translation: MRCLLGSRDRPVERACAMDSSLGALPRLVCLSLSLASILGCSCARLSFREEPVSATQRPGGPVLLRCSAQPEEARVSWLWEGRPLDPAALPPELELRPGALAIRALHPPHTGRYFCVAQLGSRAIASRNAHITIAEISAFRDLPRRLVKAEEGGTALIRCQLPPSTPPAVPRFRVRGQWLEQSTGDFFIFPSGSLQIRAVSPQHQGTYRCGAHNPVTQETRLEPHGQRLAVTRPADPAAPAPLRIVYPTSPQTVSVVKAQPLVLECIVAGRPAPAVRWTREGRQVALGPGRRLQHHSLVLDSAARSDGGAYRCSARDQTGRVVSADYTVEVLEPASVSQGLSDRSVSVGSSVNFTCASRGNPAPNVTWLLDSAPLAPSPRLQLSGSSLRIASAGPQDQGVYQCLVDNGIGSAQSSGMLTVQSAPLETSTVGVAPEAPPSAHPVQSDEGEEPPAQEEGLGGSLAPPTERTSDTPTPEAPIITSPPQTHKPDVYDLEWRAGRDWGSPIIAYFVKYRKLDEMGTVLGGWHTVRVPGSEKALRLSELEPSSLYEVLMVARSAGGDGQPAMLTFRTGKERSGPSSRSPHPQGPSPPAGRPEKLPASEALNTHFGVVVHDRVPEAPDRPTISMATESSVYVTWIPRANGGSPITAFRVEYRKQGRSADWVPAADNISPLKLSVEVRSLEPGATYRFRVIAINTYGESPHSAPSRPYHVPAVSTHFTTRPVAGPHISSTDAVSDTQIILRWTYTPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGNKQWHLIGQLQPETSYDIKMQCFNDGGESEYSNVMICETKARQAPGVSPGGGAGAVTPPGPPERGGGGAGGVQSQRGGDMLYLIVGSVLGVMVLILLAFIAMCLWRSRQQSSLHKYDPPGYLYQPAEMSSHVLEYAALPGTSHANGGLRPLPGGCPHLHHKLPGGPPLLAGAHRPHNGGGVYTALPQSDPSDCMSCQNFCNNNRCYTKTNGTFSNGTLPMMHHMSPCQQDGLEMMPLAHVTPGCDTPTVPQCPGELGEEGEKGSMTLPPSQHSCCQAGEYCQLGGRGEELHCREAEGPVLVCWETRGPPVLDCPETAGWISTGTAMDRALGDFSQPELLET
SIO_010081: cdon
subclass of: SO_0000673
so part of: cdon
location: complement(join(109307..109473,110619..110866,111899..111978,112104..112291,112366..112587,112750..112872,115476..115581,116216..116397,116747..116953,118660..118785,119362..119536,120217..120494,122478..122747,122949..123248,123339..123482,123697..123843,124172..124450,124646..124767,141542..141546))
location: region:109307-141546:-1
so has part: feature:141542-141546:-1:exon
so has part: feature:124646-124767:-1:exon
so has part: feature:124172-124450:-1:exon
so has part: feature:123697-123843:-1:exon
so has part: feature:123339-123482:-1:exon
so has part: feature:122949-123248:-1:exon
so has part: feature:122478-122747:-1:exon
so has part: feature:120217-120494:-1:exon
so has part: feature:119362-119536:-1:exon
so has part: feature:118660-118785:-1:exon
so has part: feature:116747-116953:-1:exon
so has part: feature:116216-116397:-1:exon
so has part: feature:115476-115581:-1:exon
so has part: feature:112750-112872:-1:exon
so has part: feature:112366-112587:-1:exon
so has part: feature:112104-112291:-1:exon
so has part: feature:111899-111978:-1:exon
so has part: feature:110619-110866:-1:exon
so has part: feature:109307-109473:-1:exon

XP_015193014.1
type: Protein
SIO_000068: ncbiprotein

position:109307:-1
position: 109307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141546:-1
position: 141546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141542-141546:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124646-124767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:124172-124450:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123697-123843:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:123339-123482:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122949-123248:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:122478-122747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120217-120494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:119362-119536:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118660-118785:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116747-116953:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:116216-116397:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:115476-115581:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:112750-112872:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:112366-112587:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:112104-112291:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:111899-111978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:110619-110866:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:109307-109473:-1:exon

cdon
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cdon
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X2
translation: MDSSLGALPRLVCLSLSLASILGCSCARLSFREEPVSATQRPGGPVLLRCSAQPEEARVSWLWEGRPLDPAALPPELELRPGALAIRALHPPHTGRYFCVAQLGSRAIASRNAHITIAEISAFRDLPRRLVKAEEGGTALIRCQLPPSTPPAVPRFRVRGQWLEQSTGDFFIFPSGSLQIRAVSPQHQGTYRCGAHNPVTQETRLEPHGQRLAVTRPADPAAPAPLRIVYPTSPQTVSVVKAQPLVLECIVAGRPAPAVRWTREGRQVALGPGRRLQHHSLVLDSAARSDGGAYRCSARDQTGRVVSADYTVEVLEPASVSQGLSDRSVSVGSSVNFTCASRGNPAPNVTWLLDSAPLAPSPRLQLSGSSLRIASAGPQDQGVYQCLVDNGIGSAQSSGMLTVQSAPLETSTVGVAPEAPPSAHPVQSDEGEEPPAQEEGLGGSLAPPTERTSDTPTPEAPIITSPPQTHKPDVYDLEWRAGRDWGSPIIAYFVKYRKLDEMGTVLGGWHTVRVPGSEKALRLSELEPSSLYEVLMVARSAGGDGQPAMLTFRTGKERSGPSSRSPHPQGPSPPAGRPEKLPASEALNTHFGVVVHDRVPEAPDRPTISMATESSVYVTWIPRANGGSPITAFRVEYRKQGRSADWVPAADNISPLKLSVEVRSLEPGATYRFRVIAINTYGESPHSAPSRPYHVPAVSTHFTTRPVAGPHISSTDAVSDTQIILRWTYTPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGNKQWHLIGQLQPETSYDIKMQCFNDGGESEYSNVMICETKARQAPGVSPGGGAGAVTPPGPPERGGGGAGGVQSQRGGDMLYLIVGSVLGVMVLILLAFIAMCLWRSRQQSSLHKYDPPGYLYQPAEMSSHVLEYAALPGTSHANGGLRPLPGGCPHLHHKLPGGPPLLAGAHRPHNGGGVYTALPQSDPSDCMSCQNFCNNNRCYTKTNGTFSNGTLPMMHHMSPCQQDGLEMMPLAHVTPGCDTPTVPQCPGELGEEGEKGSMTLPPSQHSCCQAGEYCQLGGRGEELHCREAEGPVLVCWETRGPPVLDCPETAGWISTGTAMDRALGDFSQPELLET
SIO_010081: cdon
subclass of: SO_0000673
so part of: cdon
location: complement(join(109307..109473,110619..110866,111899..111978,112104..112291,112366..112587,112750..112872,115476..115581,116216..116397,116747..116953,118660..118785,119362..119536,120217..120494,122478..122747,122949..123248,123339..123482,123697..123843,124172..124450,124646..124721))
location: region:109307-124721:-1
so has part: feature:124646-124721:-1:exon
so has part: feature:124172-124450:-1:exon
so has part: feature:123697-123843:-1:exon
so has part: feature:123339-123482:-1:exon
so has part: feature:122949-123248:-1:exon
so has part: feature:122478-122747:-1:exon
so has part: feature:120217-120494:-1:exon
so has part: feature:119362-119536:-1:exon
so has part: feature:118660-118785:-1:exon
so has part: feature:116747-116953:-1:exon
so has part: feature:116216-116397:-1:exon
so has part: feature:115476-115581:-1:exon
so has part: feature:112750-112872:-1:exon
so has part: feature:112366-112587:-1:exon
so has part: feature:112104-112291:-1:exon
so has part: feature:111899-111978:-1:exon
so has part: feature:110619-110866:-1:exon
so has part: feature:109307-109473:-1:exon

XP_015193015.1
type: Protein
SIO_000068: ncbiprotein

position:124721:-1
position: 124721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124646-124721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124172-124450:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123697-123843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123339-123482:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122949-123248:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122478-122747:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:120217-120494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:119362-119536:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:118660-118785:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:116747-116953:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116216-116397:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:115476-115581:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:112750-112872:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:112366-112587:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:112104-112291:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:111899-111978:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:110619-110866:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:109307-109473:-1:exon

cdon
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cdon
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X2
translation: MDSSLGALPRLVCLSLSLASILGCSCARLSFREEPVSATQRPGGPVLLRCSAQPEEARVSWLWEGRPLDPAALPPELELRPGALAIRALHPPHTGRYFCVAQLGSRAIASRNAHITIAEISAFRDLPRRLVKAEEGGTALIRCQLPPSTPPAVPRFRVRGQWLEQSTGDFFIFPSGSLQIRAVSPQHQGTYRCGAHNPVTQETRLEPHGQRLAVTRPADPAAPAPLRIVYPTSPQTVSVVKAQPLVLECIVAGRPAPAVRWTREGRQVALGPGRRLQHHSLVLDSAARSDGGAYRCSARDQTGRVVSADYTVEVLEPASVSQGLSDRSVSVGSSVNFTCASRGNPAPNVTWLLDSAPLAPSPRLQLSGSSLRIASAGPQDQGVYQCLVDNGIGSAQSSGMLTVQSAPLETSTVGVAPEAPPSAHPVQSDEGEEPPAQEEGLGGSLAPPTERTSDTPTPEAPIITSPPQTHKPDVYDLEWRAGRDWGSPIIAYFVKYRKLDEMGTVLGGWHTVRVPGSEKALRLSELEPSSLYEVLMVARSAGGDGQPAMLTFRTGKERSGPSSRSPHPQGPSPPAGRPEKLPASEALNTHFGVVVHDRVPEAPDRPTISMATESSVYVTWIPRANGGSPITAFRVEYRKQGRSADWVPAADNISPLKLSVEVRSLEPGATYRFRVIAINTYGESPHSAPSRPYHVPAVSTHFTTRPVAGPHISSTDAVSDTQIILRWTYTPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGNKQWHLIGQLQPETSYDIKMQCFNDGGESEYSNVMICETKARQAPGVSPGGGAGAVTPPGPPERGGGGAGGVQSQRGGDMLYLIVGSVLGVMVLILLAFIAMCLWRSRQQSSLHKYDPPGYLYQPAEMSSHVLEYAALPGTSHANGGLRPLPGGCPHLHHKLPGGPPLLAGAHRPHNGGGVYTALPQSDPSDCMSCQNFCNNNRCYTKTNGTFSNGTLPMMHHMSPCQQDGLEMMPLAHVTPGCDTPTVPQCPGELGEEGEKGSMTLPPSQHSCCQAGEYCQLGGRGEELHCREAEGPVLVCWETRGPPVLDCPETAGWISTGTAMDRALGDFSQPELLET
SIO_010081: cdon
subclass of: SO_0000673
so part of: cdon
location: complement(join(109307..109473,110619..110866,111899..111978,112104..112291,112366..112587,112750..112872,115476..115581,116216..116397,116747..116953,118660..118785,119362..119536,120217..120494,122478..122747,122949..123248,123339..123482,123697..123843,124172..124450,124646..124721))
location: region:109307-124721:-1
so has part: feature:124646-124721:-1:exon
so has part: feature:124172-124450:-1:exon
so has part: feature:123697-123843:-1:exon
so has part: feature:123339-123482:-1:exon
so has part: feature:122949-123248:-1:exon
so has part: feature:122478-122747:-1:exon
so has part: feature:120217-120494:-1:exon
so has part: feature:119362-119536:-1:exon
so has part: feature:118660-118785:-1:exon
so has part: feature:116747-116953:-1:exon
so has part: feature:116216-116397:-1:exon
so has part: feature:115476-115581:-1:exon
so has part: feature:112750-112872:-1:exon
so has part: feature:112366-112587:-1:exon
so has part: feature:112104-112291:-1:exon
so has part: feature:111899-111978:-1:exon
so has part: feature:110619-110866:-1:exon
so has part: feature:109307-109473:-1:exon

XP_015193016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124646-124721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124172-124450:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123697-123843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123339-123482:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122949-123248:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122478-122747:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:120217-120494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:119362-119536:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:118660-118785:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:116747-116953:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116216-116397:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:115476-115581:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:112750-112872:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:112366-112587:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:112104-112291:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:111899-111978:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:110619-110866:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:109307-109473:-1:exon

cdon
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cdon
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X2
translation: MDSSLGALPRLVCLSLSLASILGCSCARLSFREEPVSATQRPGGPVLLRCSAQPEEARVSWLWEGRPLDPAALPPELELRPGALAIRALHPPHTGRYFCVAQLGSRAIASRNAHITIAEISAFRDLPRRLVKAEEGGTALIRCQLPPSTPPAVPRFRVRGQWLEQSTGDFFIFPSGSLQIRAVSPQHQGTYRCGAHNPVTQETRLEPHGQRLAVTRPADPAAPAPLRIVYPTSPQTVSVVKAQPLVLECIVAGRPAPAVRWTREGRQVALGPGRRLQHHSLVLDSAARSDGGAYRCSARDQTGRVVSADYTVEVLEPASVSQGLSDRSVSVGSSVNFTCASRGNPAPNVTWLLDSAPLAPSPRLQLSGSSLRIASAGPQDQGVYQCLVDNGIGSAQSSGMLTVQSAPLETSTVGVAPEAPPSAHPVQSDEGEEPPAQEEGLGGSLAPPTERTSDTPTPEAPIITSPPQTHKPDVYDLEWRAGRDWGSPIIAYFVKYRKLDEMGTVLGGWHTVRVPGSEKALRLSELEPSSLYEVLMVARSAGGDGQPAMLTFRTGKERSGPSSRSPHPQGPSPPAGRPEKLPASEALNTHFGVVVHDRVPEAPDRPTISMATESSVYVTWIPRANGGSPITAFRVEYRKQGRSADWVPAADNISPLKLSVEVRSLEPGATYRFRVIAINTYGESPHSAPSRPYHVPAVSTHFTTRPVAGPHISSTDAVSDTQIILRWTYTPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGNKQWHLIGQLQPETSYDIKMQCFNDGGESEYSNVMICETKARQAPGVSPGGGAGAVTPPGPPERGGGGAGGVQSQRGGDMLYLIVGSVLGVMVLILLAFIAMCLWRSRQQSSLHKYDPPGYLYQPAEMSSHVLEYAALPGTSHANGGLRPLPGGCPHLHHKLPGGPPLLAGAHRPHNGGGVYTALPQSDPSDCMSCQNFCNNNRCYTKTNGTFSNGTLPMMHHMSPCQQDGLEMMPLAHVTPGCDTPTVPQCPGELGEEGEKGSMTLPPSQHSCCQAGEYCQLGGRGEELHCREAEGPVLVCWETRGPPVLDCPETAGWISTGTAMDRALGDFSQPELLET
SIO_010081: cdon
subclass of: SO_0000673
so part of: cdon
location: complement(join(109307..109473,110619..110866,111899..111978,112104..112291,112366..112587,112750..112872,115476..115581,116216..116397,116747..116953,118660..118785,119362..119536,120217..120494,122478..122747,122949..123248,123339..123482,123697..123843,124172..124450,124646..124721))
location: region:109307-124721:-1
so has part: feature:124646-124721:-1:exon
so has part: feature:124172-124450:-1:exon
so has part: feature:123697-123843:-1:exon
so has part: feature:123339-123482:-1:exon
so has part: feature:122949-123248:-1:exon
so has part: feature:122478-122747:-1:exon
so has part: feature:120217-120494:-1:exon
so has part: feature:119362-119536:-1:exon
so has part: feature:118660-118785:-1:exon
so has part: feature:116747-116953:-1:exon
so has part: feature:116216-116397:-1:exon
so has part: feature:115476-115581:-1:exon
so has part: feature:112750-112872:-1:exon
so has part: feature:112366-112587:-1:exon
so has part: feature:112104-112291:-1:exon
so has part: feature:111899-111978:-1:exon
so has part: feature:110619-110866:-1:exon
so has part: feature:109307-109473:-1:exon

XP_015193018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124646-124721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124172-124450:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123697-123843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123339-123482:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122949-123248:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122478-122747:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:120217-120494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:119362-119536:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:118660-118785:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:116747-116953:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116216-116397:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:115476-115581:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:112750-112872:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:112366-112587:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:112104-112291:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:111899-111978:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:110619-110866:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:109307-109473:-1:exon

LOC107075607
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(185520..192034)
location: region:185520-192034:-1
so has part: feature:185520-192034:-1:exon
subclass of: SO_0000010

107075607
type: Gene
SIO_000068: ncbigene

position:185520:-1
position: 185520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192034:-1
position: 192034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185520-192034:-1:exon

LOC107075607
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107075607
product: uncharacterized LOC107075607
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015337353.1
SIO_010081: LOC107075607
subclass of: SO_0000673
so part of: LOC107075607
location: complement(join(185520..186541,186719..186829,186938..187021,187584..187752,188570..188703,189545..189858,191156..191427,191550..192034))
location: region:185520-192034:-1
so has part: feature:191550-192034:-1:exon
so has part: feature:191156-191427:-1:exon
so has part: feature:189545-189858:-1:exon
so has part: feature:188570-188703:-1:exon
so has part: feature:187584-187752:-1:exon
so has part: feature:186938-187021:-1:exon
so has part: feature:186719-186829:-1:exon
so has part: feature:185520-186541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:191550-192034:-1:exon

position:191550:-1
position: 191550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:191156-191427:-1:exon

position:191156:-1
position: 191156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191427:-1
position: 191427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:189545-189858:-1:exon

position:189545:-1
position: 189545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189858:-1
position: 189858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:188570-188703:-1:exon

position:188570:-1
position: 188570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188703:-1
position: 188703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:187584-187752:-1:exon

position:187584:-1
position: 187584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187752:-1
position: 187752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:186938-187021:-1:exon

position:186938:-1
position: 186938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187021:-1
position: 187021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:186719-186829:-1:exon

position:186719:-1
position: 186719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186829:-1
position: 186829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:185520-186541:-1:exon

position:186541:-1
position: 186541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107075607
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107075607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107075607
translation: MNTPSSVEGGLEQTAVLTGRQGAAVRGKKGGFSALTCLATKREFKYRAGSAGTILNGKNAQGVGCPGAAPHCPAAPGPAAGAALFSCPENDTTGSVASTAFQRCLGKAGLLIPLVRPHSCSSEEEGRPGFPGASITCPGRDMSTAGSRVVGAARRGGGLGARGLRWGLLGASCCLALAAAAWARALQGAPLSSRVLLLPGDRPEAPLPGLWAALLSPCLLALLWKLRQARLLRKVGLEWCGDRGGQDGSPTFILLWSFGPRPLLSRGPRPAWLHWVLRVHCPPLGECPRRPGAAPHGFLSSVPLPVSSSSSGARDGCAALTAAQALTDALQLCLGSEPLEETSLPHVQGLTHRLEAVRRSLLSAGGVLSSVASCPPAAGLSDPQKLTDRLQRLSLYLKRRLELLRKLLQAQSKFSDSVQDVLQWERRGCAQLDRLHCRTAESRGREAMVSILKQLESFSSELGQYRNKLELCHTLHSTATRLLQKLDSSSAKFRASVGLQSQGLECGAVWTERLRGANTKQFEEASADFLSLVRLASHFHTHLEFLCKWGCGVAVSVRAEPPPPRPQPPLSQRERASQFFQSTLCGKRRSVSSS
SIO_010081: LOC107075607
subclass of: SO_0000673
so part of: LOC107075607
location: complement(join(186320..186541,186719..186829,186938..187021,187584..187752,188570..188703,189545..189858,191156..191427,191550..192028))
location: region:186320-192028:-1
so has part: feature:191550-192028:-1:exon
so has part: feature:191156-191427:-1:exon
so has part: feature:189545-189858:-1:exon
so has part: feature:188570-188703:-1:exon
so has part: feature:187584-187752:-1:exon
so has part: feature:186938-187021:-1:exon
so has part: feature:186719-186829:-1:exon
so has part: feature:186320-186541:-1:exon

XP_015192839.1
type: Protein
SIO_000068: ncbiprotein

position:186320:-1
position: 186320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192028:-1
position: 192028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191550-192028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191156-191427:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:189545-189858:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188570-188703:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187584-187752:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186938-187021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186719-186829:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:186320-186541:-1:exon

chek1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: chek1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(192157..199555)
location: region:192157-199555:-1
so has part: feature:192157-199555:-1:exon
subclass of: SO_0000010

102696807
type: Gene
SIO_000068: ncbigene

position:192157:-1
position: 192157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199555:-1
position: 199555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192157-199555:-1:exon

chek1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: chek1
product: checkpoint kinase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015337329.1
SIO_010081: chek1
subclass of: SO_0000673
so part of: chek1
location: complement(join(192157..193266,193397..193498,193939..194070,194337..194514,194822..194930,195936..196031,196230..196334,196949..197137,197329..197398,197727..197791,197966..198189,199032..199121,199489..199555))
location: region:192157-199555:-1
so has part: feature:199489-199555:-1:exon
so has part: feature:199032-199121:-1:exon
so has part: feature:197966-198189:-1:exon
so has part: feature:197727-197791:-1:exon
so has part: feature:197329-197398:-1:exon
so has part: feature:196949-197137:-1:exon
so has part: feature:196230-196334:-1:exon
so has part: feature:195936-196031:-1:exon
so has part: feature:194822-194930:-1:exon
so has part: feature:194337-194514:-1:exon
so has part: feature:193939-194070:-1:exon
so has part: feature:193397-193498:-1:exon
so has part: feature:192157-193266:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:199489-199555:-1:exon

position:199489:-1
position: 199489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:199032-199121:-1:exon

position:199032:-1
position: 199032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199121:-1
position: 199121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:197966-198189:-1:exon

position:197966:-1
position: 197966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198189:-1
position: 198189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:197727-197791:-1:exon

position:197727:-1
position: 197727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197791:-1
position: 197791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:197329-197398:-1:exon

position:197329:-1
position: 197329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197398:-1
position: 197398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:196949-197137:-1:exon

position:196949:-1
position: 196949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197137:-1
position: 197137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:196230-196334:-1:exon

position:196230:-1
position: 196230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196334:-1
position: 196334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:195936-196031:-1:exon

position:195936:-1
position: 195936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196031:-1
position: 196031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:194822-194930:-1:exon

position:194822:-1
position: 194822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194930:-1
position: 194930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:194337-194514:-1:exon

position:194337:-1
position: 194337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194514:-1
position: 194514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:193939-194070:-1:exon

position:193939:-1
position: 193939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194070:-1
position: 194070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:193397-193498:-1:exon

position:193397:-1
position: 193397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193498:-1
position: 193498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:192157-193266:-1:exon

position:193266:-1
position: 193266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

chek1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: chek1
product: checkpoint kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015337327.1
SIO_010081: chek1
subclass of: SO_0000673
so part of: chek1
location: complement(join(192157..193266,193397..193498,193939..194070,194337..194514,194822..194930,195936..196031,196230..196334,196949..197137,197329..197398,197727..197791,197966..198189,199032..199121,199243..199552))
location: region:192157-199552:-1
so has part: feature:199243-199552:-1:exon
so has part: feature:199032-199121:-1:exon
so has part: feature:197966-198189:-1:exon
so has part: feature:197727-197791:-1:exon
so has part: feature:197329-197398:-1:exon
so has part: feature:196949-197137:-1:exon
so has part: feature:196230-196334:-1:exon
so has part: feature:195936-196031:-1:exon
so has part: feature:194822-194930:-1:exon
so has part: feature:194337-194514:-1:exon
so has part: feature:193939-194070:-1:exon
so has part: feature:193397-193498:-1:exon
so has part: feature:192157-193266:-1:exon

position:199552:-1
position: 199552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199243-199552:-1:exon

position:199243:-1
position: 199243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:199032-199121:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197966-198189:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197727-197791:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:197329-197398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196949-197137:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:196230-196334:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:195936-196031:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:194822-194930:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:194337-194514:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:193939-194070:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193397-193498:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:192157-193266:-1:exon

chek1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: chek1
product: checkpoint kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_006642184.2
SIO_010081: chek1
subclass of: SO_0000673
so part of: chek1
location: complement(join(192157..193113,193159..193266,193397..193498,193939..194070,194337..194514,194822..194930,195936..196031,196230..196334,196949..197137,197329..197398,197727..197791,197966..198189,199032..199552))
location: region:192157-199552:-1
so has part: feature:199032-199552:-1:exon
so has part: feature:197966-198189:-1:exon
so has part: feature:197727-197791:-1:exon
so has part: feature:197329-197398:-1:exon
so has part: feature:196949-197137:-1:exon
so has part: feature:196230-196334:-1:exon
so has part: feature:195936-196031:-1:exon
so has part: feature:194822-194930:-1:exon
so has part: feature:194337-194514:-1:exon
so has part: feature:193939-194070:-1:exon
so has part: feature:193397-193498:-1:exon
so has part: feature:193159-193266:-1:exon
so has part: feature:192157-193113:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:199032-199552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197966-198189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197727-197791:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197329-197398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196949-197137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196230-196334:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195936-196031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:194822-194930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:194337-194514:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193939-194070:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:193397-193498:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193159-193266:-1:exon

position:193159:-1
position: 193159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:192157-193113:-1:exon

position:193113:-1
position: 193113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

chek1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: chek1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Chk1 isoform X1
translation: MAVPFVQDWDVVQTLGEGAYGEVRLLVNRQTEEAVAVKVVDTSRAADCADNVKKEICIHKMLSHRNIVRFYGHRREGDTHYIFLEYCSGGELFDRIEPDVGMPERDAHRFFQQLVAGVEYLHGIGITHRDIKPENLLLDDRDQLKISDLGLATMFRHRGRERLLSRLCGTLPYVAPELLSRADFHAQPGDVWACGIVLTAMLAGELPWDQPSETCQEYSDWLQGKTFLSPWKKMDAAPLSLLTRILLHDPASRIAIPDIKKDHWFTRGCKSGAQRPPLSSGGQGDSPGLGHKLLRSDSERVPVGRAGSEDRVQFSSSQPEPVTGASSWESSPGSMQAMVQQISFSQPACPEHMLLGSQLLGTPGSSQTPWQRLVKRMTRFFTTLEAEQSCATLRKVCLRMGYTWKQTCTNQVTVSTMDRRNNKLIFKVHLLEMEEKILMDFRLSKGDGLEFKRHFLNIKRQLSDIVSSQKVLLPVA
SIO_010081: chek1
subclass of: SO_0000673
so part of: chek1
location: complement(join(193171..193266,193397..193498,193939..194070,194337..194514,194822..194930,195936..196031,196230..196334,196949..197137,197329..197398,197727..197791,197966..198189,199032..199096))
location: region:193171-199096:-1
so has part: feature:199032-199096:-1:exon
so has part: feature:197966-198189:-1:exon
so has part: feature:197727-197791:-1:exon
so has part: feature:197329-197398:-1:exon
so has part: feature:196949-197137:-1:exon
so has part: feature:196230-196334:-1:exon
so has part: feature:195936-196031:-1:exon
so has part: feature:194822-194930:-1:exon
so has part: feature:194337-194514:-1:exon
so has part: feature:193939-194070:-1:exon
so has part: feature:193397-193498:-1:exon
so has part: feature:193171-193266:-1:exon

XP_006642247.1
type: Protein
SIO_000068: ncbiprotein

position:193171:-1
position: 193171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199096:-1
position: 199096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199032-199096:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197966-198189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197727-197791:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197329-197398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196949-197137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196230-196334:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195936-196031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:194822-194930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:194337-194514:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193939-194070:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:193397-193498:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193171-193266:-1:exon

chek1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: chek1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Chk1 isoform X1
translation: MAVPFVQDWDVVQTLGEGAYGEVRLLVNRQTEEAVAVKVVDTSRAADCADNVKKEICIHKMLSHRNIVRFYGHRREGDTHYIFLEYCSGGELFDRIEPDVGMPERDAHRFFQQLVAGVEYLHGIGITHRDIKPENLLLDDRDQLKISDLGLATMFRHRGRERLLSRLCGTLPYVAPELLSRADFHAQPGDVWACGIVLTAMLAGELPWDQPSETCQEYSDWLQGKTFLSPWKKMDAAPLSLLTRILLHDPASRIAIPDIKKDHWFTRGCKSGAQRPPLSSGGQGDSPGLGHKLLRSDSERVPVGRAGSEDRVQFSSSQPEPVTGASSWESSPGSMQAMVQQISFSQPACPEHMLLGSQLLGTPGSSQTPWQRLVKRMTRFFTTLEAEQSCATLRKVCLRMGYTWKQTCTNQVTVSTMDRRNNKLIFKVHLLEMEEKILMDFRLSKGDGLEFKRHFLNIKRQLSDIVSSQKVLLPVA
SIO_010081: chek1
subclass of: SO_0000673
so part of: chek1
location: complement(join(193171..193266,193397..193498,193939..194070,194337..194514,194822..194930,195936..196031,196230..196334,196949..197137,197329..197398,197727..197791,197966..198189,199032..199096))
location: region:193171-199096:-1
so has part: feature:199032-199096:-1:exon
so has part: feature:197966-198189:-1:exon
so has part: feature:197727-197791:-1:exon
so has part: feature:197329-197398:-1:exon
so has part: feature:196949-197137:-1:exon
so has part: feature:196230-196334:-1:exon
so has part: feature:195936-196031:-1:exon
so has part: feature:194822-194930:-1:exon
so has part: feature:194337-194514:-1:exon
so has part: feature:193939-194070:-1:exon
so has part: feature:193397-193498:-1:exon
so has part: feature:193171-193266:-1:exon

XP_015192813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199032-199096:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197966-198189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197727-197791:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197329-197398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196949-197137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196230-196334:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195936-196031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:194822-194930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:194337-194514:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193939-194070:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:193397-193498:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193171-193266:-1:exon

chek1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: chek1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Chk1 isoform X1
translation: MAVPFVQDWDVVQTLGEGAYGEVRLLVNRQTEEAVAVKVVDTSRAADCADNVKKEICIHKMLSHRNIVRFYGHRREGDTHYIFLEYCSGGELFDRIEPDVGMPERDAHRFFQQLVAGVEYLHGIGITHRDIKPENLLLDDRDQLKISDLGLATMFRHRGRERLLSRLCGTLPYVAPELLSRADFHAQPGDVWACGIVLTAMLAGELPWDQPSETCQEYSDWLQGKTFLSPWKKMDAAPLSLLTRILLHDPASRIAIPDIKKDHWFTRGCKSGAQRPPLSSGGQGDSPGLGHKLLRSDSERVPVGRAGSEDRVQFSSSQPEPVTGASSWESSPGSMQAMVQQISFSQPACPEHMLLGSQLLGTPGSSQTPWQRLVKRMTRFFTTLEAEQSCATLRKVCLRMGYTWKQTCTNQVTVSTMDRRNNKLIFKVHLLEMEEKILMDFRLSKGDGLEFKRHFLNIKRQLSDIVSSQKVLLPVA
SIO_010081: chek1
subclass of: SO_0000673
so part of: chek1
location: complement(join(193171..193266,193397..193498,193939..194070,194337..194514,194822..194930,195936..196031,196230..196334,196949..197137,197329..197398,197727..197791,197966..198189,199032..199096))
location: region:193171-199096:-1
so has part: feature:199032-199096:-1:exon
so has part: feature:197966-198189:-1:exon
so has part: feature:197727-197791:-1:exon
so has part: feature:197329-197398:-1:exon
so has part: feature:196949-197137:-1:exon
so has part: feature:196230-196334:-1:exon
so has part: feature:195936-196031:-1:exon
so has part: feature:194822-194930:-1:exon
so has part: feature:194337-194514:-1:exon
so has part: feature:193939-194070:-1:exon
so has part: feature:193397-193498:-1:exon
so has part: feature:193171-193266:-1:exon

XP_015192815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199032-199096:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197966-198189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197727-197791:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197329-197398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196949-197137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196230-196334:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195936-196031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:194822-194930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:194337-194514:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193939-194070:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:193397-193498:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193171-193266:-1:exon

chek1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: chek1
product: checkpoint kinase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_015337330.1
SIO_010081: chek1
subclass of: SO_0000673
so part of: chek1
location: complement(join(193407..193498,193876..194070,194337..194514,194822..194930,195936..196031,196230..196334,196949..197137,197329..197398,197727..197791,197966..198189,199032..199552))
location: region:193407-199552:-1
so has part: feature:199032-199552:-1:exon
so has part: feature:197966-198189:-1:exon
so has part: feature:197727-197791:-1:exon
so has part: feature:197329-197398:-1:exon
so has part: feature:196949-197137:-1:exon
so has part: feature:196230-196334:-1:exon
so has part: feature:195936-196031:-1:exon
so has part: feature:194822-194930:-1:exon
so has part: feature:194337-194514:-1:exon
so has part: feature:193876-194070:-1:exon
so has part: feature:193407-193498:-1:exon

position:193407:-1
position: 193407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199032-199552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197966-198189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197727-197791:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197329-197398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196949-197137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196230-196334:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195936-196031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:194822-194930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:194337-194514:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193876-194070:-1:exon

position:193876:-1
position: 193876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:193407-193498:-1:exon

chek1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: chek1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Chk1 isoform X2
translation: MAVPFVQDWDVVQTLGEGAYGEVRLLVNRQTEEAVAVKVVDTSRAADCADNVKKEICIHKMLSHRNIVRFYGHRREGDTHYIFLEYCSGGELFDRIEPDVGMPERDAHRFFQQLVAGVEYLHGIGITHRDIKPENLLLDDRDQLKISDLGLATMFRHRGRERLLSRLCGTLPYVAPELLSRADFHAQPGDVWACGIVLTAMLAGELPWDQPSETCQEYSDWLQGKTFLSPWKKMDAAPLSLLTRILLHDPASRIAIPDIKKDHWFTRGCKSGAQRPPLSSGGQGDSPGLGHKLLRSDSERVPVGRAGSEDRVQFSSSQPEPVTGASSWESSPGSMQAMVQQISFSQPACPEHMLLGSQLLGTPGSSQTPWQRLVKRMTRFFTTLEAEQSCATLRKVCLRMGYTWKQTCTNQVPRGAGL
SIO_010081: chek1
subclass of: SO_0000673
so part of: chek1
location: complement(join(193915..194070,194337..194514,194822..194930,195936..196031,196230..196334,196949..197137,197329..197398,197727..197791,197966..198189,199032..199096))
location: region:193915-199096:-1
so has part: feature:199032-199096:-1:exon
so has part: feature:197966-198189:-1:exon
so has part: feature:197727-197791:-1:exon
so has part: feature:197329-197398:-1:exon
so has part: feature:196949-197137:-1:exon
so has part: feature:196230-196334:-1:exon
so has part: feature:195936-196031:-1:exon
so has part: feature:194822-194930:-1:exon
so has part: feature:194337-194514:-1:exon
so has part: feature:193915-194070:-1:exon

XP_015192816.1
type: Protein
SIO_000068: ncbiprotein

position:193915:-1
position: 193915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199032-199096:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197966-198189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197727-197791:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197329-197398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196949-197137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196230-196334:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195936-196031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:194822-194930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:194337-194514:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193915-194070:-1:exon

prdm10
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: prdm10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(200799..229198)
location: region:200799-229198:-1
so has part: feature:200799-229198:-1:exon
subclass of: SO_0000010

102697003
type: Gene
SIO_000068: ncbigene

position:200799:-1
position: 200799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229198:-1
position: 229198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200799-229198:-1:exon

prdm10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: prdm10
product: PR domain containing 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015337354.1
SIO_010081: prdm10
subclass of: SO_0000673
so part of: prdm10
location: complement(join(200799..201743,202387..202493,203327..203739,206317..206564,206686..206796,206962..207141,207269..207441,218649..218952,219112..219123,219398..219661,219972..220092,220352..220863,222757..222870,223440..223721,225050..225291,225422..225623,225950..226024,228724..228885,228995..229198))
location: region:200799-229198:-1
so has part: feature:228995-229198:-1:exon
so has part: feature:228724-228885:-1:exon
so has part: feature:225950-226024:-1:exon
so has part: feature:225422-225623:-1:exon
so has part: feature:225050-225291:-1:exon
so has part: feature:223440-223721:-1:exon
so has part: feature:222757-222870:-1:exon
so has part: feature:220352-220863:-1:exon
so has part: feature:219972-220092:-1:exon
so has part: feature:219398-219661:-1:exon
so has part: feature:219112-219123:-1:exon
so has part: feature:218649-218952:-1:exon
so has part: feature:207269-207441:-1:exon
so has part: feature:206962-207141:-1:exon
so has part: feature:206686-206796:-1:exon
so has part: feature:206317-206564:-1:exon
so has part: feature:203327-203739:-1:exon
so has part: feature:202387-202493:-1:exon
so has part: feature:200799-201743:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228995-229198:-1:exon

position:228995:-1
position: 228995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:228724-228885:-1:exon

position:228724:-1
position: 228724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228885:-1
position: 228885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:225950-226024:-1:exon

position:225950:-1
position: 225950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226024:-1
position: 226024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:225422-225623:-1:exon

position:225422:-1
position: 225422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225623:-1
position: 225623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:225050-225291:-1:exon

position:225050:-1
position: 225050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225291:-1
position: 225291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:223440-223721:-1:exon

position:223440:-1
position: 223440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223721:-1
position: 223721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:222757-222870:-1:exon

position:222757:-1
position: 222757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222870:-1
position: 222870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:220352-220863:-1:exon

position:220352:-1
position: 220352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220863:-1
position: 220863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:219972-220092:-1:exon

position:219972:-1
position: 219972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220092:-1
position: 220092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:219398-219661:-1:exon

position:219398:-1
position: 219398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219661:-1
position: 219661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:219112-219123:-1:exon

position:219112:-1
position: 219112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219123:-1
position: 219123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:218649-218952:-1:exon

position:218649:-1
position: 218649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218952:-1
position: 218952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:207269-207441:-1:exon

position:207269:-1
position: 207269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207441:-1
position: 207441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:206962-207141:-1:exon

position:206962:-1
position: 206962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207141:-1
position: 207141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:206686-206796:-1:exon

position:206686:-1
position: 206686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206796:-1
position: 206796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:206317-206564:-1:exon

position:206317:-1
position: 206317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206564:-1
position: 206564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:203327-203739:-1:exon

position:203327:-1
position: 203327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203739:-1
position: 203739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:202387-202493:-1:exon

position:202387:-1
position: 202387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202493:-1
position: 202493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:200799-201743:-1:exon

position:201743:-1
position: 201743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

prdm10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: prdm10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10
translation: METKQEPPHVWSQAPDGEPGNGTQVHFEGAAVAQIVYSGEQQDRPQQQVVYTADGSSYTSVEPAEHTLVYIHPADGTQMNAANLHVLSNVAETPQAILEPVPQGALSVSNALPSMAGVGGSSSSPLGPLGATDSALDSEGEEEEDEEEGDDSDLDDWEPGPPRPFTPHDLWCEECNNAHPSVCLKHGPLHPIPNRPVLSKARASLPLVLYVDRYLGGVYSKRRIPKRTQFGPVEGPLVRQSELADSYIHLKVCRLEAGKEGEAGEDLWLDLSDEERCNWMMFVRPAQNHLEQNLVAYQYGKDIYYTTIKNIEPKQELKVGPQRGAARSRACVREFCCGREDSFAGVIAVSFRALKPGLELGLLMLEQSGESRIRIQLTHNRHATLALEAGLQASRGACSSGRLLSPAGRAVSIGAEQRRSCPLGSPGGLDSRLPLRALQQVQGDGSLGFSDARPARGSRSAVSVMGLVSSLEVRTGDESSAPQRGGGVSVRIRPVVVVVRSAPSANRWPVCLCAVLREQEKNWPCYECNRRFMSSEQLQQHLNMHDDKLDFLSRAKGRNRGRGRRRFGPGRRPGRPPKFMRLDTPAESSEDRAQELLGFPGKVQFGEGSEGTLNGLKAAEPGGPGADAEPSAQAEPQTVPSEPTPEPPGADPPEPLKDDGDQGSPADPHLTPEDMRRAKRIRMDLQNAALQHLFIRKTFRPFKCSQCGKAFREKDKLDQHLRFHGRDGSCPLTCHVCNKGFLSSAALEGHMRLHSDQKTYSCLFCPESFDRLDLLKEHVGVHLSDGXXLCPLQVKKHVRSFHSEKVYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRIHRSKTLKQKVPSTDFESFMFKCRLCMMGFRRRGMLVNHLSKRHPDMRIDEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATAPVCCPHCSKQYSSKVRACSRLGRHPPPASLFTYGFKASSVCAALLSDEYRVNWGRNWDKKPLIQRNVKMFVCMIRKAVVNGVQGSQVLFSSGLASSSKDSSPFYSQVAGQPLSPSSQQATQELSPSQLQTVTPVTLAQSHTLQTPSSQQQGAVQHAYLPSNWNYRGYSSEIQMMTLPHAQYVIAETGAPVSAVNSGQVKTMSQTHYVISEGQAELDPKQAAVPQSSAPVHPDQLEPQQQAAAQPPAAQYIITTTTNGSGASEVHIAKP
SIO_010081: prdm10
subclass of: SO_0000673
so part of: prdm10
location: complement(join(201546..201743,202387..202493,203327..203739,206317..206564,206686..206796,206962..207141,207269..207441,218649..218952,219112..219123,219398..219661,219972..220092,220352..220863,222757..222870,223440..223721,225050..225291,225422..225623,225950..226024,228724..228885,228995..229066))
location: region:201546-229066:-1
so has part: feature:228995-229066:-1:exon
so has part: feature:228724-228885:-1:exon
so has part: feature:225950-226024:-1:exon
so has part: feature:225422-225623:-1:exon
so has part: feature:225050-225291:-1:exon
so has part: feature:223440-223721:-1:exon
so has part: feature:222757-222870:-1:exon
so has part: feature:220352-220863:-1:exon
so has part: feature:219972-220092:-1:exon
so has part: feature:219398-219661:-1:exon
so has part: feature:219112-219123:-1:exon
so has part: feature:218649-218952:-1:exon
so has part: feature:207269-207441:-1:exon
so has part: feature:206962-207141:-1:exon
so has part: feature:206686-206796:-1:exon
so has part: feature:206317-206564:-1:exon
so has part: feature:203327-203739:-1:exon
so has part: feature:202387-202493:-1:exon
so has part: feature:201546-201743:-1:exon

XP_015192840.1
type: Protein
SIO_000068: ncbiprotein

position:201546:-1
position: 201546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229066:-1
position: 229066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228995-229066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:228724-228885:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225950-226024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225422-225623:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:225050-225291:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223440-223721:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:222757-222870:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:220352-220863:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:219972-220092:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:219398-219661:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:219112-219123:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:218649-218952:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:207269-207441:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:206962-207141:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:206686-206796:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:206317-206564:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:203327-203739:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:202387-202493:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:201546-201743:-1:exon

aplp2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: aplp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 259750..298417
location: region:259750-298417:1
so has part: feature:259750-298417:1:exon
subclass of: SO_0000010

102688487
type: Gene
SIO_000068: ncbigene

position:259750:1
position: 259750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298417:1
position: 298417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259750-298417:1:exon

aplp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: aplp2
product: amyloid beta (A4) precursor-like protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015337471.1
SIO_010081: aplp2
subclass of: SO_0000673
so part of: aplp2
location: join(259750..259940,263240..263369,268056..268168,269494..269711,269906..270111,270378..270545,275774..275904,275994..276068,276192..276350,280290..280418,281296..281395,283254..283418,286448..286483,288856..288938,293434..293508,294944..295099,296318..298417)
location: region:259750-298417:1
so has part: feature:259750-259940:1:exon
so has part: feature:263240-263369:1:exon
so has part: feature:268056-268168:1:exon
so has part: feature:269494-269711:1:exon
so has part: feature:269906-270111:1:exon
so has part: feature:270378-270545:1:exon
so has part: feature:275774-275904:1:exon
so has part: feature:275994-276068:1:exon
so has part: feature:276192-276350:1:exon
so has part: feature:280290-280418:1:exon
so has part: feature:281296-281395:1:exon
so has part: feature:283254-283418:1:exon
so has part: feature:286448-286483:1:exon
so has part: feature:288856-288938:1:exon
so has part: feature:293434-293508:1:exon
so has part: feature:294944-295099:1:exon
so has part: feature:296318-298417:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259750-259940:1:exon

position:259940:1
position: 259940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:263240-263369:1:exon

position:263240:1
position: 263240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263369:1
position: 263369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:268056-268168:1:exon

position:268056:1
position: 268056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268168:1
position: 268168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:269494-269711:1:exon

position:269494:1
position: 269494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269711:1
position: 269711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:269906-270111:1:exon

position:269906:1
position: 269906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270111:1
position: 270111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:270378-270545:1:exon

position:270378:1
position: 270378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270545:1
position: 270545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:275774-275904:1:exon

position:275774:1
position: 275774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275904:1
position: 275904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:275994-276068:1:exon

position:275994:1
position: 275994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276068:1
position: 276068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:276192-276350:1:exon

position:276192:1
position: 276192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276350:1
position: 276350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:280290-280418:1:exon

position:280290:1
position: 280290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280418:1
position: 280418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:281296-281395:1:exon

position:281296:1
position: 281296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281395:1
position: 281395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:283254-283418:1:exon

position:283254:1
position: 283254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283418:1
position: 283418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:286448-286483:1:exon

position:286448:1
position: 286448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286483:1
position: 286483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:288856-288938:1:exon

position:288856:1
position: 288856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288938:1
position: 288938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:293434-293508:1:exon

position:293434:1
position: 293434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293508:1
position: 293508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:294944-295099:1:exon

position:294944:1
position: 294944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295099:1
position: 295099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:296318-298417:1:exon

position:296318:1
position: 296318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

aplp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: aplp2
product: amyloid beta (A4) precursor-like protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015337472.1
SIO_010081: aplp2
subclass of: SO_0000673
so part of: aplp2
location: join(259750..259940,263240..263369,268056..268168,269494..269711,269906..270111,270378..270545,275774..275904,275994..276068,276192..276350,280290..280418,281296..281395,283254..283418,286448..286483,288856..288938,294944..295099,296318..298417)
location: region:259750-298417:1
so has part: feature:259750-259940:1:exon
so has part: feature:263240-263369:1:exon
so has part: feature:268056-268168:1:exon
so has part: feature:269494-269711:1:exon
so has part: feature:269906-270111:1:exon
so has part: feature:270378-270545:1:exon
so has part: feature:275774-275904:1:exon
so has part: feature:275994-276068:1:exon
so has part: feature:276192-276350:1:exon
so has part: feature:280290-280418:1:exon
so has part: feature:281296-281395:1:exon
so has part: feature:283254-283418:1:exon
so has part: feature:286448-286483:1:exon
so has part: feature:288856-288938:1:exon
so has part: feature:294944-295099:1:exon
so has part: feature:296318-298417:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259750-259940:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263240-263369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268056-268168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269494-269711:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269906-270111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270378-270545:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275774-275904:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275994-276068:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276192-276350:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:280290-280418:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:281296-281395:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:283254-283418:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:286448-286483:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:288856-288938:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:294944-295099:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:296318-298417:1:exon

aplp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: aplp2
product: amyloid beta (A4) precursor-like protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015337473.1
SIO_010081: aplp2
subclass of: SO_0000673
so part of: aplp2
location: join(259750..259940,263240..263369,268056..268168,269494..269711,269906..270111,275774..275904,275994..276068,276192..276350,280290..280418,281296..281395,283254..283418,286448..286483,288856..288938,293434..293508,294944..295099,296318..298417)
location: region:259750-298417:1
so has part: feature:259750-259940:1:exon
so has part: feature:263240-263369:1:exon
so has part: feature:268056-268168:1:exon
so has part: feature:269494-269711:1:exon
so has part: feature:269906-270111:1:exon
so has part: feature:275774-275904:1:exon
so has part: feature:275994-276068:1:exon
so has part: feature:276192-276350:1:exon
so has part: feature:280290-280418:1:exon
so has part: feature:281296-281395:1:exon
so has part: feature:283254-283418:1:exon
so has part: feature:286448-286483:1:exon
so has part: feature:288856-288938:1:exon
so has part: feature:293434-293508:1:exon
so has part: feature:294944-295099:1:exon
so has part: feature:296318-298417:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259750-259940:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263240-263369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268056-268168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269494-269711:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269906-270111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:275774-275904:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275994-276068:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276192-276350:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280290-280418:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281296-281395:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:283254-283418:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:286448-286483:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:288856-288938:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:293434-293508:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:294944-295099:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:296318-298417:1:exon

aplp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: aplp2
product: amyloid beta (A4) precursor-like protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_006642143.2
SIO_010081: aplp2
subclass of: SO_0000673
so part of: aplp2
location: join(259751..259940,263240..263369,268056..268168,269494..269711,269906..270111,270378..270545,275774..275904,275994..276068,276192..276350,280290..280418,281296..281395,283254..283418,288856..288938,293434..293508,294944..295099,296318..298417)
location: region:259751-298417:1
so has part: feature:259751-259940:1:exon
so has part: feature:263240-263369:1:exon
so has part: feature:268056-268168:1:exon
so has part: feature:269494-269711:1:exon
so has part: feature:269906-270111:1:exon
so has part: feature:270378-270545:1:exon
so has part: feature:275774-275904:1:exon
so has part: feature:275994-276068:1:exon
so has part: feature:276192-276350:1:exon
so has part: feature:280290-280418:1:exon
so has part: feature:281296-281395:1:exon
so has part: feature:283254-283418:1:exon
so has part: feature:288856-288938:1:exon
so has part: feature:293434-293508:1:exon
so has part: feature:294944-295099:1:exon
so has part: feature:296318-298417:1:exon

position:259751:1
position: 259751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259751-259940:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263240-263369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268056-268168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269494-269711:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269906-270111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270378-270545:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275774-275904:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275994-276068:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276192-276350:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:280290-280418:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:281296-281395:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:283254-283418:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:288856-288938:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:293434-293508:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:294944-295099:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:296318-298417:1:exon

aplp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: aplp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X1
translation: MFCGKLNMHINIQTGRWEPDPSGTKSCLDSKEAILQYCQEMYPELQITNYVEANQPVRIENWCKKGKKQCKGHAHAVVPYKCLVGEFVSDVLLVPEKCKFFHKERMDICVSHRQWHSVAKEACSKGGMVLHTYGMLLPCGIDRFHGTEYVCCPTAHPGEPAPSSPLSQEEEDEEEEIDDVDVEEEEEDEDIVESVAPPEEPSQQGGVEAQEDEEEDEEDEEELDYVYEDEEGDRDEEEEEEQKDTESTQGRPDLDRTFQEVKAVCSLAPETGPCRASMPRWHFDIRQRRCLRFVYGGCAGNRNNFDTEEYCMEVCNRLIPPTPQPTDDVDVYFETPADDKEHSRFQRAKEQLEIRHRHRMERVRKEWEEAERQAKNLPKAERQTLIQHFQAMVESLEEEAASEKQQLVETHLARVEAMLNDRRRLALENYLAALQADPPRPHRILQALKRYVRAENKDRQHTVRHYQHVLAVDPEKAAQMKSQVMTHLRVIEERMNQSLSLLYKVPYVAEEIQDEIDELLQEQRTDMDQFLSSISEAQADVTVSSEESVELPGKPYRPIRVTALGSLPESEGALSDPPRAMKKGSGMSGLDGLMGAEERAINSKGKIGSSVVIDESLDVKEVIYNAERVNGMEDEMESYQPLGEEFSFGSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLSKMQNHGYENPTYKYLEQMQI
SIO_010081: aplp2
subclass of: SO_0000673
so part of: aplp2
location: join(259821..259940,263240..263369,268056..268168,269494..269711,269906..270111,270378..270545,275774..275904,275994..276068,276192..276350,280290..280418,281296..281395,283254..283418,286448..286483,288856..288938,293434..293508,294944..295099,296318..296419)
location: region:259821-296419:1
so has part: feature:259821-259940:1:exon
so has part: feature:263240-263369:1:exon
so has part: feature:268056-268168:1:exon
so has part: feature:269494-269711:1:exon
so has part: feature:269906-270111:1:exon
so has part: feature:270378-270545:1:exon
so has part: feature:275774-275904:1:exon
so has part: feature:275994-276068:1:exon
so has part: feature:276192-276350:1:exon
so has part: feature:280290-280418:1:exon
so has part: feature:281296-281395:1:exon
so has part: feature:283254-283418:1:exon
so has part: feature:286448-286483:1:exon
so has part: feature:288856-288938:1:exon
so has part: feature:293434-293508:1:exon
so has part: feature:294944-295099:1:exon
so has part: feature:296318-296419:1:exon

XP_015192957.1
type: Protein
SIO_000068: ncbiprotein

position:259821:1
position: 259821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296419:1
position: 296419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259821-259940:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263240-263369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268056-268168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269494-269711:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269906-270111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270378-270545:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275774-275904:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275994-276068:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276192-276350:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:280290-280418:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:281296-281395:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:283254-283418:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:286448-286483:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:288856-288938:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:293434-293508:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:294944-295099:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:296318-296419:1:exon

aplp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: aplp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X3
translation: MFCGKLNMHINIQTGRWEPDPSGTKSCLDSKEAILQYCQEMYPELQITNYVEANQPVRIENWCKKGKKQCKGHAHAVVPYKCLVGEFVSDVLLVPEKCKFFHKERMDICVSHRQWHSVAKEACSKGGMVLHTYGMLLPCGIDRFHGTEYVCCPTAHPGEPAPSSPLSQEEEDEEEEIDDVDVEEEEEDEDIVESVAPPEEPSQQGGVEAQEDEEEDEEDEEELDYVYEDEEGDRDEEEEEEQKDTESTQGRPDLDRTFQEVKAVCSLAPETGPCRASMPRWHFDIRQRRCLRFVYGGCAGNRNNFDTEEYCMEVCNRLIPPTPQPTDDVDVYFETPADDKEHSRFQRAKEQLEIRHRHRMERVRKEWEEAERQAKNLPKAERQTLIQHFQAMVESLEEEAASEKQQLVETHLARVEAMLNDRRRLALENYLAALQADPPRPHRILQALKRYVRAENKDRQHTVRHYQHVLAVDPEKAAQMKSQVMTHLRVIEERMNQSLSLLYKVPYVAEEIQDEIDELLQEQRTDMDQFLSSISEAQADVTVSSEESVELPGKPYRPIRVTALGSLPESEGALSDPPRAMKKGSGMSGLDGLMGAEERAINSKGKIGSSVESYQPLGEEFSFGSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLSKMQNHGYENPTYKYLEQMQI
SIO_010081: aplp2
subclass of: SO_0000673
so part of: aplp2
location: join(259821..259940,263240..263369,268056..268168,269494..269711,269906..270111,270378..270545,275774..275904,275994..276068,276192..276350,280290..280418,281296..281395,283254..283418,286448..286483,288856..288938,294944..295099,296318..296419)
location: region:259821-296419:1
so has part: feature:259821-259940:1:exon
so has part: feature:263240-263369:1:exon
so has part: feature:268056-268168:1:exon
so has part: feature:269494-269711:1:exon
so has part: feature:269906-270111:1:exon
so has part: feature:270378-270545:1:exon
so has part: feature:275774-275904:1:exon
so has part: feature:275994-276068:1:exon
so has part: feature:276192-276350:1:exon
so has part: feature:280290-280418:1:exon
so has part: feature:281296-281395:1:exon
so has part: feature:283254-283418:1:exon
so has part: feature:286448-286483:1:exon
so has part: feature:288856-288938:1:exon
so has part: feature:294944-295099:1:exon
so has part: feature:296318-296419:1:exon

XP_015192958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259821-259940:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263240-263369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268056-268168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269494-269711:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269906-270111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270378-270545:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275774-275904:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275994-276068:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276192-276350:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:280290-280418:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:281296-281395:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:283254-283418:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:286448-286483:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:288856-288938:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:294944-295099:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:296318-296419:1:exon

aplp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: aplp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X2
translation: MFCGKLNMHINIQTGRWEPDPSGTKSCLDSKEAILQYCQEMYPELQITNYVEANQPVRIENWCKKGKKQCKGHAHAVVPYKCLVGEFVSDVLLVPEKCKFFHKERMDICVSHRQWHSVAKEACSKGGMVLHTYGMLLPCGIDRFHGTEYVCCPTAHPGEPAPSSPLSQEEEDEEEEIDDVDVEEEEEDEDIVESVAPPEEPSQQGGVEAQEDEEEDEEDEEELDYVYEDEEGDRDEEEEEEQKDTESTQGRPDLDRTFQEVKAVCSLAPETGPCRASMPRWHFDIRQRRCLRFVYGGCAGNRNNFDTEEYCMEVCNRLIPPTPQPTDDVDVYFETPADDKEHSRFQRAKEQLEIRHRHRMERVRKEWEEAERQAKNLPKAERQTLIQHFQAMVESLEEEAASEKQQLVETHLARVEAMLNDRRRLALENYLAALQADPPRPHRILQALKRYVRAENKDRQHTVRHYQHVLAVDPEKAAQMKSQVMTHLRVIEERMNQSLSLLYKVPYVAEEIQDEIDELLQEQRTDMDQFLSSISEAQADVTVSSEESVELPGKPYRPIRVTALGSLPESEGSGMSGLDGLMGAEERAINSKGKIGSSVVIDESLDVKEVIYNAERVNGMEDEMESYQPLGEEFSFGSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLSKMQNHGYENPTYKYLEQMQI
SIO_010081: aplp2
subclass of: SO_0000673
so part of: aplp2
location: join(259821..259940,263240..263369,268056..268168,269494..269711,269906..270111,270378..270545,275774..275904,275994..276068,276192..276350,280290..280418,281296..281395,283254..283418,288856..288938,293434..293508,294944..295099,296318..296419)
location: region:259821-296419:1
so has part: feature:259821-259940:1:exon
so has part: feature:263240-263369:1:exon
so has part: feature:268056-268168:1:exon
so has part: feature:269494-269711:1:exon
so has part: feature:269906-270111:1:exon
so has part: feature:270378-270545:1:exon
so has part: feature:275774-275904:1:exon
so has part: feature:275994-276068:1:exon
so has part: feature:276192-276350:1:exon
so has part: feature:280290-280418:1:exon
so has part: feature:281296-281395:1:exon
so has part: feature:283254-283418:1:exon
so has part: feature:288856-288938:1:exon
so has part: feature:293434-293508:1:exon
so has part: feature:294944-295099:1:exon
so has part: feature:296318-296419:1:exon

XP_006642206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259821-259940:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263240-263369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268056-268168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269494-269711:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269906-270111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270378-270545:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275774-275904:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275994-276068:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276192-276350:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:280290-280418:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:281296-281395:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:283254-283418:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:288856-288938:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:293434-293508:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:294944-295099:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:296318-296419:1:exon

aplp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: aplp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X4
translation: MFCGKLNMHINIQTGRWEPDPSGTKSCLDSKEAILQYCQEMYPELQITNYVEANQPVRIENWCKKGKKQCKGHAHAVVPYKCLVGEFVSDVLLVPEKCKFFHKERMDICVSHRQWHSVAKEACSKGGMVLHTYGMLLPCGIDRFHGTEYVCCPTAHPGEPAPSSPLSQEEEDEEEEIDDVDVEEEEEDEDIVESVAPPEEPSQQGGVEAQEDEEEDEEDEEELDYVYEDEEGDRDEEEEEEQKDTESTQGRPDLDRTFQEVKVPPTPQPTDDVDVYFETPADDKEHSRFQRAKEQLEIRHRHRMERVRKEWEEAERQAKNLPKAERQTLIQHFQAMVESLEEEAASEKQQLVETHLARVEAMLNDRRRLALENYLAALQADPPRPHRILQALKRYVRAENKDRQHTVRHYQHVLAVDPEKAAQMKSQVMTHLRVIEERMNQSLSLLYKVPYVAEEIQDEIDELLQEQRTDMDQFLSSISEAQADVTVSSEESVELPGKPYRPIRVTALGSLPESEGALSDPPRAMKKGSGMSGLDGLMGAEERAINSKGKIGSSVVIDESLDVKEVIYNAERVNGMEDEMESYQPLGEEFSFGSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLSKMQNHGYENPTYKYLEQMQI
SIO_010081: aplp2
subclass of: SO_0000673
so part of: aplp2
location: join(259821..259940,263240..263369,268056..268168,269494..269711,269906..270111,275774..275904,275994..276068,276192..276350,280290..280418,281296..281395,283254..283418,286448..286483,288856..288938,293434..293508,294944..295099,296318..296419)
location: region:259821-296419:1
so has part: feature:259821-259940:1:exon
so has part: feature:263240-263369:1:exon
so has part: feature:268056-268168:1:exon
so has part: feature:269494-269711:1:exon
so has part: feature:269906-270111:1:exon
so has part: feature:275774-275904:1:exon
so has part: feature:275994-276068:1:exon
so has part: feature:276192-276350:1:exon
so has part: feature:280290-280418:1:exon
so has part: feature:281296-281395:1:exon
so has part: feature:283254-283418:1:exon
so has part: feature:286448-286483:1:exon
so has part: feature:288856-288938:1:exon
so has part: feature:293434-293508:1:exon
so has part: feature:294944-295099:1:exon
so has part: feature:296318-296419:1:exon

XP_015192959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259821-259940:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263240-263369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268056-268168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269494-269711:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269906-270111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:275774-275904:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275994-276068:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276192-276350:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280290-280418:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281296-281395:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:283254-283418:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:286448-286483:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:288856-288938:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:293434-293508:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:294944-295099:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:296318-296419:1:exon

st14
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: st14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 300258..320945
location: region:300258-320945:1
so has part: feature:300258-320945:1:exon
subclass of: SO_0000010

102697193
type: Gene
SIO_000068: ncbigene

position:300258:1
position: 300258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320945:1
position: 320945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300258-320945:1:exon

st14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: st14
product: suppression of tumorigenicity 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015337356.1
SIO_010081: st14
subclass of: SO_0000673
so part of: st14
location: join(300258..302141,309233..309392,309686..309816,310357..310427,310947..311119,311652..311687,311773..312007,314262..314459,315005..315163,316125..316144,316251..316493,316844..316957,317047..317117,319800..319982,320203..320945)
location: region:300258-320945:1
so has part: feature:300258-302141:1:exon
so has part: feature:309233-309392:1:exon
so has part: feature:309686-309816:1:exon
so has part: feature:310357-310427:1:exon
so has part: feature:310947-311119:1:exon
so has part: feature:311652-311687:1:exon
so has part: feature:311773-312007:1:exon
so has part: feature:314262-314459:1:exon
so has part: feature:315005-315163:1:exon
so has part: feature:316125-316144:1:exon
so has part: feature:316251-316493:1:exon
so has part: feature:316844-316957:1:exon
so has part: feature:317047-317117:1:exon
so has part: feature:319800-319982:1:exon
so has part: feature:320203-320945:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300258-302141:1:exon

position:302141:1
position: 302141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309233-309392:1:exon

position:309233:1
position: 309233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309392:1
position: 309392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:309686-309816:1:exon

position:309686:1
position: 309686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309816:1
position: 309816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:310357-310427:1:exon

position:310357:1
position: 310357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310427:1
position: 310427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:310947-311119:1:exon

position:310947:1
position: 310947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311119:1
position: 311119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:311652-311687:1:exon

position:311652:1
position: 311652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311687:1
position: 311687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:311773-312007:1:exon

position:311773:1
position: 311773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312007:1
position: 312007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:314262-314459:1:exon

position:314262:1
position: 314262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314459:1
position: 314459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:315005-315163:1:exon

position:315005:1
position: 315005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315163:1
position: 315163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:316125-316144:1:exon

position:316125:1
position: 316125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316144:1
position: 316144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:316251-316493:1:exon

position:316251:1
position: 316251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316493:1
position: 316493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:316844-316957:1:exon

position:316844:1
position: 316844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316957:1
position: 316957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:317047-317117:1:exon

position:317047:1
position: 317047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317117:1
position: 317117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:319800-319982:1:exon

position:319800:1
position: 319800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319982:1
position: 319982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:320203-320945:1:exon

position:320203:1
position: 320203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

st14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: st14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of tumorigenicity 14 protein
translation: MDPLDSGMRYNPKSGDRDWDTSLQFLPAADAKKVEKRRGPGRKMAMAAIVVFAAVVALMTGLLVWHFHFRKEVIVWKMYSGSLRITNQVFIDAYENPNSTEFMELADKVVEELRLIYSKTPELSKHHVASTVEAFSEGSVIAYYLSEFSVPAEQVEAVDRAVGSMETVVAKLQRGSGARRRVSSLTVDSVTSGAVDPRMARDATRTLCRYSLHSRPGQTYTLQSPGFPDSPYPPNTHCEWQLRADPGNVITLEFLTFNLESDCGNDFVKLYDSLVPLESRAMSDSEPLRTQGCYSWLLGALWDLTPRLSLSQVPTEKYVKVRFSKFLLSEPGSMASGRCLKDYVLVNEEKLCGEKLPNTVVSSQSNTMKVTFFSDNSFVDRGFSAQYEAFDPTDRESLDLLPHTAPGHPSGIREWCQSCSNRRVSAETGPVRTRTESRSLMLPHCRCLPPCVCPACEKDQLQCKNSLCKPKFWMCDGVNDCGDNSDEAACECKSGEIKCRNGKCLSEKKKCDGSDDCGDGTDESECGTSVQVQCSEFTYLCKDKVCITKLNPADRCADRCADRSAPTGTVASVLQKAEVRIINDTVCDQLMSGQITSRMICAGVLSGGVDACQGDSGGPLSSAETNGRLFLAGVVSWGDGCARRNKPGVYTRVTQYRGWIKQHTGV
SIO_010081: st14
subclass of: SO_0000673
so part of: st14
location: join(302097..302141,309233..309392,309686..309816,310357..310427,310947..311119,311652..311687,311773..312007,314262..314459,315005..315163,316125..316144,316251..316493,316844..316957,317047..317117,319800..319982,320203..320364)
location: region:302097-320364:1
so has part: feature:302097-302141:1:exon
so has part: feature:309233-309392:1:exon
so has part: feature:309686-309816:1:exon
so has part: feature:310357-310427:1:exon
so has part: feature:310947-311119:1:exon
so has part: feature:311652-311687:1:exon
so has part: feature:311773-312007:1:exon
so has part: feature:314262-314459:1:exon
so has part: feature:315005-315163:1:exon
so has part: feature:316125-316144:1:exon
so has part: feature:316251-316493:1:exon
so has part: feature:316844-316957:1:exon
so has part: feature:317047-317117:1:exon
so has part: feature:319800-319982:1:exon
so has part: feature:320203-320364:1:exon

XP_015192842.1
type: Protein
SIO_000068: ncbiprotein

position:302097:1
position: 302097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320364:1
position: 320364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302097-302141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309233-309392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309686-309816:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:310357-310427:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:310947-311119:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:311652-311687:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311773-312007:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:314262-314459:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315005-315163:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:316125-316144:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:316251-316493:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:316844-316957:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317047-317117:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:319800-319982:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:320203-320364:1:exon

LOC107075635
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075635
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 322715..331149
location: region:322715-331149:1
so has part: feature:322715-331149:1:exon
subclass of: SO_0000010

107075635
type: Gene
SIO_000068: ncbigene

position:322715:1
position: 322715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331149:1
position: 331149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322715-331149:1:exon

LOC107075635
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107075635
product: lipase member H-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015337418.1
SIO_010081: LOC107075635
subclass of: SO_0000673
so part of: LOC107075635
location: join(322715..323024,324457..324812,325178..325286,326037..326138,326848..326955,327211..327378,328895..328987,329829..329940,330277..330459,330787..331149)
location: region:322715-331149:1
so has part: feature:322715-323024:1:exon
so has part: feature:324457-324812:1:exon
so has part: feature:325178-325286:1:exon
so has part: feature:326037-326138:1:exon
so has part: feature:326848-326955:1:exon
so has part: feature:327211-327378:1:exon
so has part: feature:328895-328987:1:exon
so has part: feature:329829-329940:1:exon
so has part: feature:330277-330459:1:exon
so has part: feature:330787-331149:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:322715-323024:1:exon

position:323024:1
position: 323024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:324457-324812:1:exon

position:324457:1
position: 324457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324812:1
position: 324812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:325178-325286:1:exon

position:325178:1
position: 325178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325286:1
position: 325286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:326037-326138:1:exon

position:326037:1
position: 326037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326138:1
position: 326138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:326848-326955:1:exon

position:326848:1
position: 326848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326955:1
position: 326955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:327211-327378:1:exon

position:327211:1
position: 327211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327378:1
position: 327378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:328895-328987:1:exon

position:328895:1
position: 328895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328987:1
position: 328987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:329829-329940:1:exon

position:329829:1
position: 329829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329940:1
position: 329940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:330277-330459:1:exon

position:330277:1
position: 330277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330459:1
position: 330459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:330787-331149:1:exon

position:330787:1
position: 330787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107075635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107075635
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipase member H-like
translation: MFRTLWLFCFLPGPLAGTGASQCPDFLSVAPPALEVRMLGFAAEGGPCGRPLNMTAPGGLGAYPWDPRLPSVLIVHGRRPPQVRPQWVGQLARELLSTQRLNVLAVDWLSPRGRGLVPTARQAGRKLACLIRALLARGSSAETIHLIGFGVGAHIAGNAGAALRGCLGRITGLDPFGPEFTEAGPSVGLDWSDAQFVDVIHANFRPNEPVAALGSARPLGHVDFYIGKGHQLPGCPPGLLDRERYVLCSHWRAHQIFTSSIRSHCPLFAFPCLSRHGFERGQCTHCHTAGLHACPQLGYNTSWVAAERPVPFQQLTALLDVTSAPPFCVTPFLLEFQVGGVTPLRAYLFIQLRGGGVETSSLLLSGSAPVRFQPGKVYRFMVSANRDGDFSHLLLEFYTRRNLYLEWRKRIVHLSQLLLTRLPRDRGVSYFAYDVRAAEGHTVEVRLTKEVATEEEEEEEEEQ
SIO_010081: LOC107075635
subclass of: SO_0000673
so part of: LOC107075635
location: join(322976..323024,324457..324812,325178..325286,326037..326138,326848..326955,327211..327378,328895..328987,329829..329940,330277..330459,330787..330898)
location: region:322976-330898:1
so has part: feature:322976-323024:1:exon
so has part: feature:324457-324812:1:exon
so has part: feature:325178-325286:1:exon
so has part: feature:326037-326138:1:exon
so has part: feature:326848-326955:1:exon
so has part: feature:327211-327378:1:exon
so has part: feature:328895-328987:1:exon
so has part: feature:329829-329940:1:exon
so has part: feature:330277-330459:1:exon
so has part: feature:330787-330898:1:exon

XP_015192904.1
type: Protein
SIO_000068: ncbiprotein

position:322976:1
position: 322976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330898:1
position: 330898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322976-323024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324457-324812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325178-325286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326037-326138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:326848-326955:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:327211-327378:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:328895-328987:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:329829-329940:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:330277-330459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:330787-330898:1:exon

nfrkb
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: nfrkb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 332792..350416
location: region:332792-350416:1
so has part: feature:332792-350416:1:exon
subclass of: SO_0000010

102697396
type: Gene
SIO_000068: ncbigene

position:332792:1
position: 332792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350416:1
position: 350416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332792-350416:1:exon

nfrkb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: nfrkb
product: nuclear factor related to kappaB binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015337357.1
SIO_010081: nfrkb
subclass of: SO_0000673
so part of: nfrkb
location: join(332792..332867,333920..334073,334830..335031,335973..336100,336555..336604,336825..336973,337454..337527,337647..337731,338121..338322,338836..338858,339031..339035,339311..339437,340225..340302,340441..340520,341052..341098,341206..341266,341394..341568,341820..341926,342235..342358,342920..342999,343747..343967,344230..344289,346290..346584,346774..347553,347885..347985,348506..348641,348991..350416)
location: region:332792-350416:1
so has part: feature:332792-332867:1:exon
so has part: feature:333920-334073:1:exon
so has part: feature:334830-335031:1:exon
so has part: feature:335973-336100:1:exon
so has part: feature:336555-336604:1:exon
so has part: feature:336825-336973:1:exon
so has part: feature:337454-337527:1:exon
so has part: feature:337647-337731:1:exon
so has part: feature:338121-338322:1:exon
so has part: feature:338836-338858:1:exon
so has part: feature:339031-339035:1:exon
so has part: feature:339311-339437:1:exon
so has part: feature:340225-340302:1:exon
so has part: feature:340441-340520:1:exon
so has part: feature:341052-341098:1:exon
so has part: feature:341206-341266:1:exon
so has part: feature:341394-341568:1:exon
so has part: feature:341820-341926:1:exon
so has part: feature:342235-342358:1:exon
so has part: feature:342920-342999:1:exon
so has part: feature:343747-343967:1:exon
so has part: feature:344230-344289:1:exon
so has part: feature:346290-346584:1:exon
so has part: feature:346774-347553:1:exon
so has part: feature:347885-347985:1:exon
so has part: feature:348506-348641:1:exon
so has part: feature:348991-350416:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332792-332867:1:exon

position:332867:1
position: 332867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:333920-334073:1:exon

position:333920:1
position: 333920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334073:1
position: 334073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:334830-335031:1:exon

position:334830:1
position: 334830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335031:1
position: 335031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:335973-336100:1:exon

position:335973:1
position: 335973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336100:1
position: 336100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:336555-336604:1:exon

position:336555:1
position: 336555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336604:1
position: 336604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:336825-336973:1:exon

position:336825:1
position: 336825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336973:1
position: 336973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:337454-337527:1:exon

position:337454:1
position: 337454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337527:1
position: 337527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:337647-337731:1:exon

position:337647:1
position: 337647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337731:1
position: 337731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:338121-338322:1:exon

position:338121:1
position: 338121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338322:1
position: 338322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:338836-338858:1:exon

position:338836:1
position: 338836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338858:1
position: 338858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:339031-339035:1:exon

position:339031:1
position: 339031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339035:1
position: 339035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:339311-339437:1:exon

position:339311:1
position: 339311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339437:1
position: 339437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:340225-340302:1:exon

position:340225:1
position: 340225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340302:1
position: 340302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:340441-340520:1:exon

position:340441:1
position: 340441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340520:1
position: 340520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:341052-341098:1:exon

position:341052:1
position: 341052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341098:1
position: 341098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:341206-341266:1:exon

position:341206:1
position: 341206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341266:1
position: 341266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:341394-341568:1:exon

position:341394:1
position: 341394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341568:1
position: 341568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:341820-341926:1:exon

position:341820:1
position: 341820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341926:1
position: 341926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:342235-342358:1:exon

position:342235:1
position: 342235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342358:1
position: 342358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:342920-342999:1:exon

position:342920:1
position: 342920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342999:1
position: 342999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:343747-343967:1:exon

position:343747:1
position: 343747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343967:1
position: 343967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:344230-344289:1:exon

position:344230:1
position: 344230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344289:1
position: 344289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:346290-346584:1:exon

position:346290:1
position: 346290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346584:1
position: 346584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:346774-347553:1:exon

position:346774:1
position: 346774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347553:1
position: 347553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:347885-347985:1:exon

position:347885:1
position: 347885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347985:1
position: 347985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:348506-348641:1:exon

position:348506:1
position: 348506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348641:1
position: 348641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:348991-350416:1:exon

position:348991:1
position: 348991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nfrkb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: nfrkb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor related to kappa-B-binding protein
translation: MDALDHMLTDPLDSGQGGDGRIMEECMLGNTRVSLPEDLLEDPEIFFSVVSDSTWHHVLTDAQRQRLRQLLPHFPEDSAALQDGVLADLFGNQNFRFGNPLHLAQKLFRDGYFNPEVVKYRQLVAKSQRKRCLYSQQQHYHRLLKQILVSRKELLDRARRGGPDLVLKRFTPLCPSVPLSVCADLGSWLPASLLPPSPSQPVALRVLPSLFTQDMKTADKPELTEKDLRAMLRRHREKRRHQPDRPDLLTSDLSLSDIVSRVSAGRKGSIMALVDLGVPKKKAREEKRKKKMRPVKMEPEDPCDVLGPPDAPPAAAAAATVAVVSPEPPAAPLAGVKEEPVEEVHSKTLEERVQQWQASPASTLNPWFSGAPCWSDLVLPALHFLAGESKAGVLCLPAGFSPSVEFQERSQHWKWISPSQDCEKDLNALCQLWLETKDQVVIKPESEEPAEMTPPTPRVWTDYVVRPSTGEERQVFQEQEQQRYDQPHRAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSQEEFERIHQAQAAAAKAKKALQQKPKPAPKLKASAKEAGLKTPGAGEPGQILGLEPAAVPATSLPPTPTTPSPVLPGTPRSPSLPSSSTPTKSGAGPDTVKPSPSVLLVSPPSMPQLGTLLSASHVAFFLHPSSPLTYSAPVSLVPPLREQTVVTVPLRTQSGSSPVQVQASRGQAGLTVAGLASAVTVAKPPAGGPPGSPAASAPAATTLLQSVTGQNIIKQVAITGQLGMKSQPGAGIPLTATNLRIQGKDVLRLPPSSITTDAKGQTVLRITPDMMATLTKSPMATVKLTPDVLNAAAAGGKSISATLHVTPSPASSSAASSSSADSPAIKTCSAPTMAAGGATTLVKMHQEIKAAGDTAIRLMPALAVSMAEQKAKSLSAISSSDSKPAATIRIMPGLGVIPQKPGQAIAVATSAAGAKPTPAVSSGAATVTIATGGVAGAKGVTVGSAVTGAPLSLGTGTATVRQVPVSATVVSSTQPGKLPARITVPLSVLSQPRKSMVTAPILKGSIGTNISGLGRNIILTTMPAGTKLIAGNKPVSFVTAQQLQQLQQQGQAAQVRIQTVPAQQLQQRTAAGSPKPVSTVVVTSAPSPKPTPDPQ
SIO_010081: nfrkb
subclass of: SO_0000673
so part of: nfrkb
location: join(333948..334073,334830..335031,335973..336100,336555..336604,336825..336973,337454..337527,337647..337731,338121..338322,338836..338858,339031..339035,339311..339437,340225..340302,340441..340520,341052..341098,341206..341266,341394..341568,341820..341926,342235..342358,342920..342999,343747..343967,344230..344289,346290..346584,346774..347553,347885..347985,348506..348641,348991..349116)
location: region:333948-349116:1
so has part: feature:333948-334073:1:exon
so has part: feature:334830-335031:1:exon
so has part: feature:335973-336100:1:exon
so has part: feature:336555-336604:1:exon
so has part: feature:336825-336973:1:exon
so has part: feature:337454-337527:1:exon
so has part: feature:337647-337731:1:exon
so has part: feature:338121-338322:1:exon
so has part: feature:338836-338858:1:exon
so has part: feature:339031-339035:1:exon
so has part: feature:339311-339437:1:exon
so has part: feature:340225-340302:1:exon
so has part: feature:340441-340520:1:exon
so has part: feature:341052-341098:1:exon
so has part: feature:341206-341266:1:exon
so has part: feature:341394-341568:1:exon
so has part: feature:341820-341926:1:exon
so has part: feature:342235-342358:1:exon
so has part: feature:342920-342999:1:exon
so has part: feature:343747-343967:1:exon
so has part: feature:344230-344289:1:exon
so has part: feature:346290-346584:1:exon
so has part: feature:346774-347553:1:exon
so has part: feature:347885-347985:1:exon
so has part: feature:348506-348641:1:exon
so has part: feature:348991-349116:1:exon

XP_015192843.1
type: Protein
SIO_000068: ncbiprotein

position:333948:1
position: 333948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349116:1
position: 349116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333948-334073:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334830-335031:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335973-336100:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:336555-336604:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336825-336973:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:337454-337527:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:337647-337731:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:338121-338322:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:338836-338858:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:339031-339035:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:339311-339437:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:340225-340302:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:340441-340520:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:341052-341098:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:341206-341266:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:341394-341568:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:341820-341926:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:342235-342358:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:342920-342999:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:343747-343967:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:344230-344289:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:346290-346584:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:346774-347553:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:347885-347985:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:348506-348641:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:348991-349116:1:exon

tmem45b
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: tmem45b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(352997..355436)
location: region:352997-355436:-1
so has part: feature:352997-355436:-1:exon
subclass of: SO_0000010

102697588
type: Gene
SIO_000068: ncbigene

position:352997:-1
position: 352997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355436:-1
position: 355436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352997-355436:-1:exon

tmem45b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: tmem45b
product: transmembrane protein 45B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015337347.1
SIO_010081: tmem45b
subclass of: SO_0000673
so part of: tmem45b
location: complement(join(352997..353405,353684..353829,354470..354654,355017..355436))
location: region:352997-355436:-1
so has part: feature:355017-355436:-1:exon
so has part: feature:354470-354654:-1:exon
so has part: feature:353684-353829:-1:exon
so has part: feature:352997-353405:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355017-355436:-1:exon

position:355017:-1
position: 355017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:354470-354654:-1:exon

position:354470:-1
position: 354470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354654:-1
position: 354654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:353684-353829:-1:exon

position:353684:-1
position: 353684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353829:-1
position: 353829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:352997-353405:-1:exon

position:353405:-1
position: 353405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tmem45b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: tmem45b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 45B
translation: MAEQFVPDGPHARLYNREDHAWVKLMNWQHSTMYLFYGVSGIADLLTASPLPAPPGLDRLALSLALFVEGFLFYFHVHSRTPLDVHVHSLLLVAVFGGAASTFLEVFLRDSPVLQLFRASLAILQGTWFWQIGFVLYPPGGGEQWDEKDHNNIMFITMCYCWHYAAALLVIAGNYTAVWCCVRRRAAREGEDMEIRLLKTSSSDTSSHKALLQESEEE
SIO_010081: tmem45b
subclass of: SO_0000673
so part of: tmem45b
location: complement(join(353288..353405,353684..353829,354470..354654,355017..355224))
location: region:353288-355224:-1
so has part: feature:355017-355224:-1:exon
so has part: feature:354470-354654:-1:exon
so has part: feature:353684-353829:-1:exon
so has part: feature:353288-353405:-1:exon

XP_015192833.1
type: Protein
SIO_000068: ncbiprotein

position:353288:-1
position: 353288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355224:-1
position: 355224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355017-355224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354470-354654:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:353684-353829:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:353288-353405:-1:exon

LOC107075601
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(360752..362802)
location: region:360752-362802:-1
so has part: feature:360752-362802:-1:exon
subclass of: SO_0000011

107075601
type: Gene
SIO_000068: ncbigene

position:360752:-1
position: 360752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362802:-1
position: 362802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360752-362802:-1:exon

LOC107075601
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075601
product: uncharacterized LOC107075601, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001477115.1
SIO_010081: LOC107075601
subclass of: SO_0000673
so part of: LOC107075601
location: complement(join(360752..360947,361045..361152,361402..361540,362430..362802))
location: region:360752-362802:-1
so has part: feature:362430-362802:-1:exon
so has part: feature:361402-361540:-1:exon
so has part: feature:361045-361152:-1:exon
so has part: feature:360752-360947:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362430-362802:-1:exon

position:362430:-1
position: 362430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:361402-361540:-1:exon

position:361402:-1
position: 361402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361540:-1
position: 361540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:361045-361152:-1:exon

position:361045:-1
position: 361045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361152:-1
position: 361152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:360752-360947:-1:exon

position:360947:-1
position: 360947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107075601
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075601
product: uncharacterized LOC107075601, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001477114.1
SIO_010081: LOC107075601
subclass of: SO_0000673
so part of: LOC107075601
location: complement(join(360752..361152,361402..361540,362430..362797))
location: region:360752-362797:-1
so has part: feature:362430-362797:-1:exon
so has part: feature:361402-361540:-1:exon
so has part: feature:360752-361152:-1:exon

position:362797:-1
position: 362797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362430-362797:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361402-361540:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360752-361152:-1:exon

LOC107075600
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075600
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(368228..368760)
location: region:368228-368760:-1
so has part: feature:368228-368760:-1:exon
subclass of: SO_0000011

107075600
type: Gene
SIO_000068: ncbigene

position:368228:-1
position: 368228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368760:-1
position: 368760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368228-368760:-1:exon

LOC107075600
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075600
product: uncharacterized LOC107075600
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_001477113.1
SIO_010081: LOC107075600
subclass of: SO_0000673
so part of: LOC107075600
location: complement(join(368228..368342,368561..368601,368676..368760))
location: region:368228-368760:-1
so has part: feature:368676-368760:-1:exon
so has part: feature:368561-368601:-1:exon
so has part: feature:368228-368342:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368676-368760:-1:exon

position:368676:-1
position: 368676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:368561-368601:-1:exon

position:368561:-1
position: 368561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368601:-1
position: 368601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:368228-368342:-1:exon

position:368342:-1
position: 368342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107075636
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075636
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 374271..375048
location: region:374271-375048:1
so has part: feature:374271-375048:1:exon
subclass of: SO_0000011

107075636
type: Gene
SIO_000068: ncbigene

position:374271:1
position: 374271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375048:1
position: 375048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374271-375048:1:exon

LOC107075636
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075636
product: uncharacterized LOC107075636
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001477152.1
SIO_010081: LOC107075636
subclass of: SO_0000673
so part of: LOC107075636
location: join(374271..374348,374455..375048)
location: region:374271-375048:1
so has part: feature:374271-374348:1:exon
so has part: feature:374455-375048:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:374271-374348:1:exon

position:374348:1
position: 374348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:374455-375048:1:exon

position:374455:1
position: 374455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

btg4
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: btg4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(376949..395292)
location: region:376949-395292:-1
so has part: feature:376949-395292:-1:exon
subclass of: SO_0000010

102697779
type: Gene
SIO_000068: ncbigene

position:376949:-1
position: 376949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395292:-1
position: 395292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376949-395292:-1:exon

btg4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: btg4
product: BTG family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 51% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015337358.1
SIO_010081: btg4
subclass of: SO_0000673
so part of: btg4
location: complement(join(376949..377034,377211..377319,378252..378414,378898..378978,379133..379230,379875..379947,380031..380354,385516..385661,385883..386093,386724..386815,393420..393481,395166..395292))
location: region:376949-395292:-1
so has part: feature:395166-395292:-1:exon
so has part: feature:393420-393481:-1:exon
so has part: feature:386724-386815:-1:exon
so has part: feature:385883-386093:-1:exon
so has part: feature:385516-385661:-1:exon
so has part: feature:380031-380354:-1:exon
so has part: feature:379875-379947:-1:exon
so has part: feature:379133-379230:-1:exon
so has part: feature:378898-378978:-1:exon
so has part: feature:378252-378414:-1:exon
so has part: feature:377211-377319:-1:exon
so has part: feature:376949-377034:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:395166-395292:-1:exon

position:395166:-1
position: 395166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:393420-393481:-1:exon

position:393420:-1
position: 393420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393481:-1
position: 393481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:386724-386815:-1:exon

position:386724:-1
position: 386724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386815:-1
position: 386815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:385883-386093:-1:exon

position:385883:-1
position: 385883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386093:-1
position: 386093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:385516-385661:-1:exon

position:385516:-1
position: 385516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385661:-1
position: 385661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:380031-380354:-1:exon

position:380031:-1
position: 380031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380354:-1
position: 380354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:379875-379947:-1:exon

position:379875:-1
position: 379875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379947:-1
position: 379947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:379133-379230:-1:exon

position:379133:-1
position: 379133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379230:-1
position: 379230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:378898-378978:-1:exon

position:378898:-1
position: 378898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378978:-1
position: 378978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:378252-378414:-1:exon

position:378252:-1
position: 378252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378414:-1
position: 378414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:377211-377319:-1:exon

position:377211:-1
position: 377211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377319:-1
position: 377319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:376949-377034:-1:exon

position:377034:-1
position: 377034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

btg4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: btg4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BTG4
translation: MKLPPCSELGRLRSGAACDSPQVRLWFRLPTGCISCQFTWLCGVVMDLPPDVTEPRWSPGSARRACQQSDVDYEELGLPREMTVWVDPGEVSCRYGEKNEPISVAVLKGQGENQQLSQRINSAVERATSDYYSGTSSDEEGTSSTGVSQPKTIPTVSNPNSIYQAGDFGPPPAQPWAPYPKRKAYQGDGYYPPHKAHKSYRPSSGFSGPRVDRCICLSGQNGCNWRLPWRQRPGQRQEGDPGLHQRRSGGLAFPVRLQVVDEGPGTGPFAQFSNVQSVLITGYIDSSDTSEGIITYSTDLFYRFNCRYPLEYLLENVPLITSSISAAINGNNGSFISTLSLKIYNDSTYTSQLVVPDTGIQLRTKIYVEVGARNLTGNFNVLLDHCFATPSPFGTTTVKHTFFIGCTKDARTTILANGVGQSSRFLFDAFRFREQLNSTVYLHCVTRLCEPSTCQQLLSTCNSGNGRKRRAAEAFGTETQNSVTVSSGPLQVTDRESGVLFLQLIEAGQVVKHVFVAEKAAET
SIO_010081: btg4
subclass of: SO_0000673
so part of: btg4
location: complement(join(376949..377034,377211..377319,378252..378414,378898..378978,379133..379230,379875..379947,380031..380354,385516..385661,385883..386093,386724..386815,393420..393481,395166..395292))
location: region:376949-395292:-1
so has part: feature:395166-395292:-1:exon
so has part: feature:393420-393481:-1:exon
so has part: feature:386724-386815:-1:exon
so has part: feature:385883-386093:-1:exon
so has part: feature:385516-385661:-1:exon
so has part: feature:380031-380354:-1:exon
so has part: feature:379875-379947:-1:exon
so has part: feature:379133-379230:-1:exon
so has part: feature:378898-378978:-1:exon
so has part: feature:378252-378414:-1:exon
so has part: feature:377211-377319:-1:exon
so has part: feature:376949-377034:-1:exon

XP_015192844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395166-395292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393420-393481:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:386724-386815:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:385883-386093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:385516-385661:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:380031-380354:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:379875-379947:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:379133-379230:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:378898-378978:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:378252-378414:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:377211-377319:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:376949-377034:-1:exon

clg26h11orf88
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: clg26h11orf88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 395891..410980
location: region:395891-410980:1
so has part: feature:395891-410980:1:exon
subclass of: SO_0000010

107075652
type: Gene
SIO_000068: ncbigene

position:395891:1
position: 395891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410980:1
position: 410980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395891-410980:1:exon

clg26h11orf88
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7918
gene: clg26h11orf88
product: chromosome LG26 open reading frame, human C11orf88, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_001477172.1
SIO_010081: clg26h11orf88
so part of: clg26h11orf88
location: join(395891..397592,399246..399284,399376..399446,405937..405996,406738..406790,409373..409492,409948..410980)
location: region:395891-410980:1
so has part: feature:395891-397592:1:exon
so has part: feature:399246-399284:1:exon
so has part: feature:399376-399446:1:exon
so has part: feature:405937-405996:1:exon
so has part: feature:406738-406790:1:exon
so has part: feature:409373-409492:1:exon
so has part: feature:409948-410980:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:395891-397592:1:exon

position:397592:1
position: 397592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:399246-399284:1:exon

position:399246:1
position: 399246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399284:1
position: 399284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:399376-399446:1:exon

position:399376:1
position: 399376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399446:1
position: 399446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:405937-405996:1:exon

position:405937:1
position: 405937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405996:1
position: 405996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:406738-406790:1:exon

position:406738:1
position: 406738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406790:1
position: 406790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:409373-409492:1:exon

position:409373:1
position: 409373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409492:1
position: 409492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:409948-410980:1:exon

position:409948:1
position: 409948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

clg26h11orf88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: clg26h11orf88
product: chromosome LG26 open reading frame, human C11orf88, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015337564.1
SIO_010081: clg26h11orf88
subclass of: SO_0000673
so part of: clg26h11orf88
location: join(395891..397592,399246..399284,399376..399446,405937..405996,406738..406790,409373..410772)
location: region:395891-410772:1
so has part: feature:395891-397592:1:exon
so has part: feature:399246-399284:1:exon
so has part: feature:399376-399446:1:exon
so has part: feature:405937-405996:1:exon
so has part: feature:406738-406790:1:exon
so has part: feature:409373-410772:1:exon

position:410772:1
position: 410772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395891-397592:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399246-399284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399376-399446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405937-405996:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:406738-406790:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:409373-410772:1:exon

clg26h11orf88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: clg26h11orf88
product: chromosome LG26 open reading frame, human C11orf88, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015337565.1
SIO_010081: clg26h11orf88
subclass of: SO_0000673
so part of: clg26h11orf88
location: join(395891..397592,399246..399284,399376..399446,405937..405996,406738..406790,408971..409361)
location: region:395891-409361:1
so has part: feature:395891-397592:1:exon
so has part: feature:399246-399284:1:exon
so has part: feature:399376-399446:1:exon
so has part: feature:405937-405996:1:exon
so has part: feature:406738-406790:1:exon
so has part: feature:408971-409361:1:exon

position:409361:1
position: 409361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395891-397592:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399246-399284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399376-399446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405937-405996:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:406738-406790:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:408971-409361:1:exon

position:408971:1
position: 408971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

clg26h11orf88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: clg26h11orf88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0722 protein C11orf88 homolog isoform X1
translation: MSGRRGPGGPAGFEQYFTVFAGSSVEDVSYAKLFWSSASLNPPLESRLVSGDTRQRLRTAGGPQAQASAVHGLQTTDTRCEEFLHEAYLQQKAEEKQRYLEKAKKREELLALLQKQRADRIRKEKISQPYRPKNSMEAQSPLRPGDQLEEALAQVRALH
SIO_010081: clg26h11orf88
subclass of: SO_0000673
so part of: clg26h11orf88
location: join(397397..397592,399246..399284,399376..399446,405937..405996,406738..406790,409373..409433)
location: region:397397-409433:1
so has part: feature:397397-397592:1:exon
so has part: feature:399246-399284:1:exon
so has part: feature:399376-399446:1:exon
so has part: feature:405937-405996:1:exon
so has part: feature:406738-406790:1:exon
so has part: feature:409373-409433:1:exon

XP_015193050.1
type: Protein
SIO_000068: ncbiprotein

position:397397:1
position: 397397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409433:1
position: 409433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397397-397592:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399246-399284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399376-399446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405937-405996:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:406738-406790:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:409373-409433:1:exon

clg26h11orf88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: clg26h11orf88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0722 protein C11orf88 homolog isoform X2
translation: MSGRRGPGGPAGFEQYFTVFAGSSVEDVSYAKLFWSSASLNPPLESRLVSGDTRQRLRTAGGPQAQASAVHGLQTTDTRCEEFLHEAYLQQKAEEKQRYLEKAKKREELLALLQKQRADRIRKEKISQPYRPKNSMEAQRE
SIO_010081: clg26h11orf88
subclass of: SO_0000673
so part of: clg26h11orf88
location: join(397397..397592,399246..399284,399376..399446,405937..405996,406738..406790,408971..408977)
location: region:397397-408977:1
so has part: feature:397397-397592:1:exon
so has part: feature:399246-399284:1:exon
so has part: feature:399376-399446:1:exon
so has part: feature:405937-405996:1:exon
so has part: feature:406738-406790:1:exon
so has part: feature:408971-408977:1:exon

XP_015193051.1
type: Protein
SIO_000068: ncbiprotein

position:408977:1
position: 408977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397397-397592:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399246-399284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399376-399446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405937-405996:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:406738-406790:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:408971-408977:1:exon

layn
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: layn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 411076..418415
location: region:411076-418415:1
so has part: feature:411076-418415:1:exon
subclass of: SO_0000010

102688943
type: Gene
SIO_000068: ncbigene

position:411076:1
position: 411076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418415:1
position: 418415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411076-418415:1:exon

layn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: layn
product: layilin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015337560.1
SIO_010081: layn
subclass of: SO_0000673
so part of: layn
location: join(411076..411619,412189..412209,413303..413600,413997..414154,415925..415969,417485..417571,417843..417945,418064..418415)
location: region:411076-418415:1
so has part: feature:411076-411619:1:exon
so has part: feature:412189-412209:1:exon
so has part: feature:413303-413600:1:exon
so has part: feature:413997-414154:1:exon
so has part: feature:415925-415969:1:exon
so has part: feature:417485-417571:1:exon
so has part: feature:417843-417945:1:exon
so has part: feature:418064-418415:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:411076-411619:1:exon

position:411619:1
position: 411619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:412189-412209:1:exon

position:412189:1
position: 412189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412209:1
position: 412209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:413303-413600:1:exon

position:413303:1
position: 413303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413600:1
position: 413600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:413997-414154:1:exon

position:413997:1
position: 413997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414154:1
position: 414154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:415925-415969:1:exon

position:415925:1
position: 415925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415969:1
position: 415969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:417485-417571:1:exon

position:417485:1
position: 417485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417571:1
position: 417571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:417843-417945:1:exon

position:417843:1
position: 417843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417945:1
position: 417945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:418064-418415:1:exon

position:418064:1
position: 418064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

layn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: layn
product: layilin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015337563.1
SIO_010081: layn
subclass of: SO_0000673
so part of: layn
location: join(411076..411619,412189..412209,413303..413600,413997..414154,417485..417571,417843..417945,418064..418415)
location: region:411076-418415:1
so has part: feature:411076-411619:1:exon
so has part: feature:412189-412209:1:exon
so has part: feature:413303-413600:1:exon
so has part: feature:413997-414154:1:exon
so has part: feature:417485-417571:1:exon
so has part: feature:417843-417945:1:exon
so has part: feature:418064-418415:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:411076-411619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412189-412209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413303-413600:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413997-414154:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417485-417571:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:417843-417945:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418064-418415:1:exon

layn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: layn
product: layilin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015337562.1
SIO_010081: layn
subclass of: SO_0000673
so part of: layn
location: join(411076..411619,413303..413600,413997..414154,415925..415969,417485..417571,417843..417945,418064..418415)
location: region:411076-418415:1
so has part: feature:411076-411619:1:exon
so has part: feature:413303-413600:1:exon
so has part: feature:413997-414154:1:exon
so has part: feature:415925-415969:1:exon
so has part: feature:417485-417571:1:exon
so has part: feature:417843-417945:1:exon
so has part: feature:418064-418415:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:411076-411619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413303-413600:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413997-414154:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:415925-415969:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417485-417571:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:417843-417945:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418064-418415:1:exon

layn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: layn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: layilin isoform X1
translation: MDFMRLFGTVLALWICPGSASKLFSADGYEPRGQRICRRGTERPCYKIAYFQDSWRKASFEEARRACHSDGGELLSVESENEQQLVERFVRELRASDGDFWIGLRRSPGHRDTSGDCPTQYHWVDGSQATFRNWHWDEPSCGYEVCVVMYHQPSAPPGPGGLYMFQWNDDNCDTKNNFICKYTQEKGPVSTPTANSTHTEAAATSPRPKYPPVTDREEKVDVLMTKSKDNILNIVYIVIPTIPLLLLLLVATGVFCFRLFASRRKERTEACHKEPTLWMSPDRASSPSLDVYHVIRKQHEADLAGTRPDIKITSFRGSSPDDQLSSDYDNMAGNTSESGFATLASTESGFVTNDIYETCQGRGRPNRESGWVENEIYGY
SIO_010081: layn
subclass of: SO_0000673
so part of: layn
location: join(411544..411619,412189..412209,413303..413600,413997..414154,415925..415969,417485..417571,417843..417945,418064..418415)
location: region:411544-418415:1
so has part: feature:411544-411619:1:exon
so has part: feature:412189-412209:1:exon
so has part: feature:413303-413600:1:exon
so has part: feature:413997-414154:1:exon
so has part: feature:415925-415969:1:exon
so has part: feature:417485-417571:1:exon
so has part: feature:417843-417945:1:exon
so has part: feature:418064-418415:1:exon

XP_015193046.1
type: Protein
SIO_000068: ncbiprotein

position:411544:1
position: 411544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411544-411619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412189-412209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413303-413600:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413997-414154:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:415925-415969:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:417485-417571:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:417843-417945:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:418064-418415:1:exon

layn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: layn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: layilin isoform X3
translation: MDFMRLFGTVLALWICPGSASKLFSADGYEPRGQRICRRGTERPCYKIAYFQDSWRKASFEEARRACHSDGGELLSVESENEQQLVERFVRELRASDGDFWIGLRRSPGHRDTSGDCPTQYHWVDGSQATFRNWHWDEPSCGYEVCVVMYHQPSAPPGPGGLYMFQWNDDNCDTKNNFICKYTQEAAATSPRPKYPPVTDREEKVDVLMTKSKDNILNIVYIVIPTIPLLLLLLVATGVFCFRLFASRRKERTEACHKEPTLWMSPDRASSPSLDVYHVIRKQHEADLAGTRPDIKITSFRGSSPDDQLSSDYDNMAGNTSESGFATLASTESGFVTNDIYETCQGRGRPNRESGWVENEIYGY
SIO_010081: layn
subclass of: SO_0000673
so part of: layn
location: join(411544..411619,412189..412209,413303..413600,413997..414154,417485..417571,417843..417945,418064..418415)
location: region:411544-418415:1
so has part: feature:411544-411619:1:exon
so has part: feature:412189-412209:1:exon
so has part: feature:413303-413600:1:exon
so has part: feature:413997-414154:1:exon
so has part: feature:417485-417571:1:exon
so has part: feature:417843-417945:1:exon
so has part: feature:418064-418415:1:exon

XP_015193049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411544-411619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412189-412209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413303-413600:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413997-414154:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417485-417571:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:417843-417945:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418064-418415:1:exon

layn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: layn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: layilin isoform X2
translation: MDFMRLFGTVLALWICPGSASKLFSGQRICRRGTERPCYKIAYFQDSWRKASFEEARRACHSDGGELLSVESENEQQLVERFVRELRASDGDFWIGLRRSPGHRDTSGDCPTQYHWVDGSQATFRNWHWDEPSCGYEVCVVMYHQPSAPPGPGGLYMFQWNDDNCDTKNNFICKYTQEKGPVSTPTANSTHTEAAATSPRPKYPPVTDREEKVDVLMTKSKDNILNIVYIVIPTIPLLLLLLVATGVFCFRLFASRRKERTEACHKEPTLWMSPDRASSPSLDVYHVIRKQHEADLAGTRPDIKITSFRGSSPDDQLSSDYDNMAGNTSESGFATLASTESGFVTNDIYETCQGRGRPNRESGWVENEIYGY
SIO_010081: layn
subclass of: SO_0000673
so part of: layn
location: join(411544..411619,413303..413600,413997..414154,415925..415969,417485..417571,417843..417945,418064..418415)
location: region:411544-418415:1
so has part: feature:411544-411619:1:exon
so has part: feature:413303-413600:1:exon
so has part: feature:413997-414154:1:exon
so has part: feature:415925-415969:1:exon
so has part: feature:417485-417571:1:exon
so has part: feature:417843-417945:1:exon
so has part: feature:418064-418415:1:exon

XP_015193048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411544-411619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413303-413600:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413997-414154:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:415925-415969:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417485-417571:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:417843-417945:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418064-418415:1:exon

sik2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: sik2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 421459..466384
location: region:421459-466384:1
so has part: feature:421459-466384:1:exon
subclass of: SO_0000010

102698176
type: Gene
SIO_000068: ncbigene

position:421459:1
position: 421459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466384:1
position: 466384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421459-466384:1:exon

sik2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: sik2
product: salt inducible kinase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015337359.1
SIO_010081: sik2
subclass of: SO_0000673
so part of: sik2
location: join(421459..421970,433752..433868,436530..436593,448285..448446,455386..455510,456149..456272,457844..458073,458602..458769,459016..459068,459871..460211,460303..460587,463359..463516,464503..464616,465186..465277,465753..466384)
location: region:421459-466384:1
so has part: feature:421459-421970:1:exon
so has part: feature:433752-433868:1:exon
so has part: feature:436530-436593:1:exon
so has part: feature:448285-448446:1:exon
so has part: feature:455386-455510:1:exon
so has part: feature:456149-456272:1:exon
so has part: feature:457844-458073:1:exon
so has part: feature:458602-458769:1:exon
so has part: feature:459016-459068:1:exon
so has part: feature:459871-460211:1:exon
so has part: feature:460303-460587:1:exon
so has part: feature:463359-463516:1:exon
so has part: feature:464503-464616:1:exon
so has part: feature:465186-465277:1:exon
so has part: feature:465753-466384:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:421459-421970:1:exon

position:421970:1
position: 421970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433752-433868:1:exon

position:433752:1
position: 433752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433868:1
position: 433868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:436530-436593:1:exon

position:436530:1
position: 436530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436593:1
position: 436593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:448285-448446:1:exon

position:448285:1
position: 448285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448446:1
position: 448446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:455386-455510:1:exon

position:455386:1
position: 455386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455510:1
position: 455510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:456149-456272:1:exon

position:456149:1
position: 456149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456272:1
position: 456272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:457844-458073:1:exon

position:457844:1
position: 457844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458073:1
position: 458073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:458602-458769:1:exon

position:458602:1
position: 458602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458769:1
position: 458769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:459016-459068:1:exon

position:459016:1
position: 459016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459068:1
position: 459068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:459871-460211:1:exon

position:459871:1
position: 459871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460211:1
position: 460211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:460303-460587:1:exon

position:460303:1
position: 460303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460587:1
position: 460587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:463359-463516:1:exon

position:463359:1
position: 463359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463516:1
position: 463516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:464503-464616:1:exon

position:464503:1
position: 464503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464616:1
position: 464616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:465186-465277:1:exon

position:465186:1
position: 465186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465277:1
position: 465277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:465753-466384:1:exon

position:465753:1
position: 465753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sik2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: sik2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SIK2
translation: MVMADTHQKPTHRGPVRVGFYDIERTLGKGNFAVVKLARHRITKTEVAIKIIDKSQLDSVNLEKIYREVQIMKILDHPHIIKLYQVMETKNMLYLVTEYAKNGEIFDYLASHGRLSEPEARRKFWQILSAVDYCHNRKIVHRDLKAENLLLDGHMNIKIADFGFGNFFQPGEPLATWCGSPPYAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPSLPVLRQRVLEGRFRIPYFMTEDCEHLIRRMLVLDPSKRLTVAQIKEHRWMTLEVPVQRPVLYQQAAAPEEGEAGVGEHNEQVLRLMHSLGIDQHKTIELAQLGRSLSPVALALRVAGAPSQAGCSRLCSPHHSGFYRAVEENGSRQLRGSPQAPTRLRSRKEEEGGREGVELSAGALCECEAGLAPAATCRAVWRRASEPLGRPCRLQVNGCLLDPLPPSTIRKAGPSSPSNMMETSIDEGIETEEPDSEEDPCQAFAALHTSRFGQRRHTLSEVTNQPGMVPSAGKLFNVGHNPSLGSVDSEYDMGFVHSDLSLLEDTPALNEVVLANTSITRMTPPFIGARPANPAMQALSSQKREAHNRSPISFREGRRASDTSLTQGLVAFRQHLQNLARTKGILELNKVQMLYEQMGPSDEPSAQPPLPDLLDAQQRQADLSHPQDGVSVYPGGPHPQILSRRQSLETQYLTHRLQKASLLASSPTSCQMFCKETPRSLEQQLQEHRLHQKRLYLQKQSQLQAYFNQMQIAEGSYPPRQALGHHHESSGSQPGQGVPTQQQPQPSAPQASPPFARVQPPLTPLLEPSPEPLTYEPYLGHYQDLQPMGVPPGLPLQSQPRDPLGYSYPGGDLALPPSPEPLYQEQYQYPAEPGQPPPLGRPEGVPASYEGLALPELHSSFLDCEMMETVDSQHGFVLVN
SIO_010081: sik2
subclass of: SO_0000673
so part of: sik2
location: join(421833..421970,433752..433868,436530..436593,448285..448446,455386..455510,456149..456272,457844..458073,458602..458769,459016..459068,459871..460211,460303..460587,463359..463516,464503..464616,465186..465277,465753..466329)
location: region:421833-466329:1
so has part: feature:421833-421970:1:exon
so has part: feature:433752-433868:1:exon
so has part: feature:436530-436593:1:exon
so has part: feature:448285-448446:1:exon
so has part: feature:455386-455510:1:exon
so has part: feature:456149-456272:1:exon
so has part: feature:457844-458073:1:exon
so has part: feature:458602-458769:1:exon
so has part: feature:459016-459068:1:exon
so has part: feature:459871-460211:1:exon
so has part: feature:460303-460587:1:exon
so has part: feature:463359-463516:1:exon
so has part: feature:464503-464616:1:exon
so has part: feature:465186-465277:1:exon
so has part: feature:465753-466329:1:exon

XP_015192845.1
type: Protein
SIO_000068: ncbiprotein

position:421833:1
position: 421833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466329:1
position: 466329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421833-421970:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433752-433868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436530-436593:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448285-448446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455386-455510:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456149-456272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:457844-458073:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:458602-458769:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:459016-459068:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:459871-460211:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460303-460587:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:463359-463516:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:464503-464616:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:465186-465277:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:465753-466329:1:exon

LOC107075649
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075649
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 423953..427510
location: region:423953-427510:1
so has part: feature:423953-427510:1:exon
subclass of: SO_0000011

107075649
type: Gene
SIO_000068: ncbigene

position:423953:1
position: 423953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427510:1
position: 427510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423953-427510:1:exon

LOC107075649
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075649
product: uncharacterized LOC107075649
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001477165.1
SIO_010081: LOC107075649
subclass of: SO_0000673
so part of: LOC107075649
location: join(423953..424493,424581..424762,427069..427510)
location: region:423953-427510:1
so has part: feature:423953-424493:1:exon
so has part: feature:424581-424762:1:exon
so has part: feature:427069-427510:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:423953-424493:1:exon

position:424493:1
position: 424493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:424581-424762:1:exon

position:424581:1
position: 424581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424762:1
position: 424762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:427069-427510:1:exon

position:427069:1
position: 427069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ppp2r1b
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ppp2r1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(486776..513220)
location: region:486776-513220:-1
so has part: feature:486776-513220:-1:exon
subclass of: SO_0000010

102698381
type: Gene
SIO_000068: ncbigene

position:486776:-1
position: 486776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513220:-1
position: 513220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486776-513220:-1:exon

ppp2r1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ppp2r1b
product: protein phosphatase 2 regulatory subunit A, beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015337544.1
SIO_010081: ppp2r1b
subclass of: SO_0000673
so part of: ppp2r1b
location: complement(join(486776..488372,489468..489559,489929..490071,490868..491022,493406..493466,494091..494264,496432..496566,502372..502442,503735..503849,506122..506277,507147..507294,508133..508365,508777..508877,510870..510960,512851..513028,513146..513220))
location: region:486776-513220:-1
so has part: feature:513146-513220:-1:exon
so has part: feature:512851-513028:-1:exon
so has part: feature:510870-510960:-1:exon
so has part: feature:508777-508877:-1:exon
so has part: feature:508133-508365:-1:exon
so has part: feature:507147-507294:-1:exon
so has part: feature:506122-506277:-1:exon
so has part: feature:503735-503849:-1:exon
so has part: feature:502372-502442:-1:exon
so has part: feature:496432-496566:-1:exon
so has part: feature:494091-494264:-1:exon
so has part: feature:493406-493466:-1:exon
so has part: feature:490868-491022:-1:exon
so has part: feature:489929-490071:-1:exon
so has part: feature:489468-489559:-1:exon
so has part: feature:486776-488372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:513146-513220:-1:exon

position:513146:-1
position: 513146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:512851-513028:-1:exon

position:512851:-1
position: 512851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513028:-1
position: 513028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:510870-510960:-1:exon

position:510870:-1
position: 510870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510960:-1
position: 510960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:508777-508877:-1:exon

position:508777:-1
position: 508777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508877:-1
position: 508877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:508133-508365:-1:exon

position:508133:-1
position: 508133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508365:-1
position: 508365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:507147-507294:-1:exon

position:507147:-1
position: 507147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507294:-1
position: 507294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:506122-506277:-1:exon

position:506122:-1
position: 506122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506277:-1
position: 506277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:503735-503849:-1:exon

position:503735:-1
position: 503735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503849:-1
position: 503849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:502372-502442:-1:exon

position:502372:-1
position: 502372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502442:-1
position: 502442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:496432-496566:-1:exon

position:496432:-1
position: 496432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496566:-1
position: 496566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:494091-494264:-1:exon

position:494091:-1
position: 494091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494264:-1
position: 494264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:493406-493466:-1:exon

position:493406:-1
position: 493406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493466:-1
position: 493466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:490868-491022:-1:exon

position:490868:-1
position: 490868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491022:-1
position: 491022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:489929-490071:-1:exon

position:489929:-1
position: 489929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490071:-1
position: 490071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:489468-489559:-1:exon

position:489468:-1
position: 489468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489559:-1
position: 489559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:486776-488372:-1:exon

position:488372:-1
position: 488372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ppp2r1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ppp2r1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
translation: MAGADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIYDEDEVLLALAEQLGNFTMLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRKISHEHSPVDLEVHFEPLVKRLASGDWFTSRTSACGLFSVCYPRVSSTVKAEIRQHFRTLCSDDTPMVRRAAASKLGEFAKVLELEYVKSDIISLFTALASDEQDSVRLLAVEACVSIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPEITKNDLVPAFQSLLKDCEAEVRAAAANKVKEFCENLPEDSRETIIMSHILPCVKELVSDTNQHVKSALASVIMGLSTILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATCNLMKLVEKFGAEWAQNTIVPKVLSMANDPNYLHRMTTLFCINALSEACGQEITTKQMLPVVLKMSNDQVANVRFNVAKSLQKIGPVLDSNALQTEVKPVLEKLATDQDMDVKYFAQEAISVLALA
SIO_010081: ppp2r1b
subclass of: SO_0000673
so part of: ppp2r1b
location: complement(join(488356..488372,489468..489559,489929..490071,490868..491022,493406..493466,494091..494264,496432..496566,502372..502442,503735..503849,506122..506277,507147..507294,508133..508365,508777..508877,510870..510960,512851..512928))
location: region:488356-512928:-1
so has part: feature:512851-512928:-1:exon
so has part: feature:510870-510960:-1:exon
so has part: feature:508777-508877:-1:exon
so has part: feature:508133-508365:-1:exon
so has part: feature:507147-507294:-1:exon
so has part: feature:506122-506277:-1:exon
so has part: feature:503735-503849:-1:exon
so has part: feature:502372-502442:-1:exon
so has part: feature:496432-496566:-1:exon
so has part: feature:494091-494264:-1:exon
so has part: feature:493406-493466:-1:exon
so has part: feature:490868-491022:-1:exon
so has part: feature:489929-490071:-1:exon
so has part: feature:489468-489559:-1:exon
so has part: feature:488356-488372:-1:exon

XP_015193030.1
type: Protein
SIO_000068: ncbiprotein

position:488356:-1
position: 488356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512928:-1
position: 512928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512851-512928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510870-510960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:508777-508877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508133-508365:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:507147-507294:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:506122-506277:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:503735-503849:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:502372-502442:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:496432-496566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:494091-494264:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:493406-493466:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:490868-491022:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:489929-490071:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:489468-489559:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:488356-488372:-1:exon

alg9
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: alg9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(515508..532716)
location: region:515508-532716:-1
so has part: feature:515508-532716:-1:exon
subclass of: SO_0000010

102698586
type: Gene
SIO_000068: ncbigene

position:515508:-1
position: 515508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532716:-1
position: 532716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515508-532716:-1:exon

alg9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: alg9
product: ALG9, alpha-1,2-mannosyltransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015337598.1
SIO_010081: alg9
subclass of: SO_0000673
so part of: alg9
location: complement(join(515508..517319,519555..519685,523373..523502,524067..524214,524310..524439,524605..524759,525309..525431,526379..526484,526629..526716,527662..527797,528219..528307,529575..529645,530207..530341,530907..531042,532402..532716))
location: region:515508-532716:-1
so has part: feature:532402-532716:-1:exon
so has part: feature:530907-531042:-1:exon
so has part: feature:530207-530341:-1:exon
so has part: feature:529575-529645:-1:exon
so has part: feature:528219-528307:-1:exon
so has part: feature:527662-527797:-1:exon
so has part: feature:526629-526716:-1:exon
so has part: feature:526379-526484:-1:exon
so has part: feature:525309-525431:-1:exon
so has part: feature:524605-524759:-1:exon
so has part: feature:524310-524439:-1:exon
so has part: feature:524067-524214:-1:exon
so has part: feature:523373-523502:-1:exon
so has part: feature:519555-519685:-1:exon
so has part: feature:515508-517319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:532402-532716:-1:exon

position:532402:-1
position: 532402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:530907-531042:-1:exon

position:530907:-1
position: 530907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531042:-1
position: 531042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:530207-530341:-1:exon

position:530207:-1
position: 530207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530341:-1
position: 530341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:529575-529645:-1:exon

position:529575:-1
position: 529575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529645:-1
position: 529645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:528219-528307:-1:exon

position:528219:-1
position: 528219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528307:-1
position: 528307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:527662-527797:-1:exon

position:527662:-1
position: 527662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527797:-1
position: 527797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:526629-526716:-1:exon

position:526629:-1
position: 526629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526716:-1
position: 526716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:526379-526484:-1:exon

position:526379:-1
position: 526379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526484:-1
position: 526484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:525309-525431:-1:exon

position:525309:-1
position: 525309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525431:-1
position: 525431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:524605-524759:-1:exon

position:524605:-1
position: 524605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524759:-1
position: 524759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:524310-524439:-1:exon

position:524310:-1
position: 524310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524439:-1
position: 524439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:524067-524214:-1:exon

position:524067:-1
position: 524067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524214:-1
position: 524214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:523373-523502:-1:exon

position:523373:-1
position: 523373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523502:-1
position: 523502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:519555-519685:-1:exon

position:519555:-1
position: 519555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519685:-1
position: 519685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:515508-517319:-1:exon

position:517319:-1
position: 517319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

alg9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: alg9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,2-mannosyltransferase ALG9
translation: MAARGLRQRVRRGSKQEANSGSPNVGSDPRIRDEIKGSEESKTSETRNEGSSRAGQVWAPEGSTAFKCLVSARFCAALLSNISDCDETFNYWEPTHFLLYGKGMQTWEYSPTYAIRSYAYLWLHALPACFHARILQTNKVLVFYFLRCLLAFACCVCELYFYKAVCKKFGLHVGRLMLAFLVLSAGMFCSAAAYLPSSFCMYCTLVAMTGWFQDRPGVAVLGVAAGALVGWPFSALLGLPIAFDLLLLRRRWRSFLSWTLLALALLLVPVVVLDSHYYGKLVIAPLNIVLYNVFTPHGPDLYGTEPWHYYFVNGFLNFNLVFVLALLALPLTAIMEALLHRFNVQNLGRPYWLTLSPMYIWMLVFFTRPHKEERFLFPIYPLICLCGAVALSSLQKCYHFLFQRYRLEHYTVSSHWLALGCVLLSSLLSLSRSVALFRGYHAPLDLYPEFHRIAKDPSIHTVPEGRPVSVCVGKEWHRFPSSFLLPDNWHLQFIQSEFRGQLPQPYPQGPRATQTVPEHVNDQNLEEPSRYVDIKQCHYLVDLDTAAEAPREPRYAANKEEWTVIAYKPFLDSARSSRLLRAFFVPYLSDQHTSYTSYVILKPRRPKPARKRTQP
SIO_010081: alg9
subclass of: SO_0000673
so part of: alg9
location: complement(join(517196..517319,519555..519685,523373..523502,524067..524214,524310..524439,524605..524759,525309..525431,526379..526484,526629..526716,527662..527797,528219..528307,529575..529645,530207..530341,530907..531042,532402..532547))
location: region:517196-532547:-1
so has part: feature:532402-532547:-1:exon
so has part: feature:530907-531042:-1:exon
so has part: feature:530207-530341:-1:exon
so has part: feature:529575-529645:-1:exon
so has part: feature:528219-528307:-1:exon
so has part: feature:527662-527797:-1:exon
so has part: feature:526629-526716:-1:exon
so has part: feature:526379-526484:-1:exon
so has part: feature:525309-525431:-1:exon
so has part: feature:524605-524759:-1:exon
so has part: feature:524310-524439:-1:exon
so has part: feature:524067-524214:-1:exon
so has part: feature:523373-523502:-1:exon
so has part: feature:519555-519685:-1:exon
so has part: feature:517196-517319:-1:exon

XP_015193084.1
type: Protein
SIO_000068: ncbiprotein

position:517196:-1
position: 517196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532547:-1
position: 532547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532402-532547:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:530907-531042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:530207-530341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529575-529645:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:528219-528307:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:527662-527797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:526629-526716:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:526379-526484:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:525309-525431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:524605-524759:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:524310-524439:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:524067-524214:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:523373-523502:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:519555-519685:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:517196-517319:-1:exon

fdxacb1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: fdxacb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(539807..545085)
location: region:539807-545085:-1
so has part: feature:539807-545085:-1:exon
subclass of: SO_0000010

107075605
type: Gene
SIO_000068: ncbigene

position:539807:-1
position: 539807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545085:-1
position: 545085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539807-545085:-1:exon

fdxacb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: fdxacb1
product: ferredoxin-fold anticodon binding domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015337351.1
SIO_010081: fdxacb1
subclass of: SO_0000673
so part of: fdxacb1
location: complement(join(539807..540364,540621..540824,541763..541919,543232..543417,544165..544212,544600..544724,544823..545085))
location: region:539807-545085:-1
so has part: feature:544823-545085:-1:exon
so has part: feature:544600-544724:-1:exon
so has part: feature:544165-544212:-1:exon
so has part: feature:543232-543417:-1:exon
so has part: feature:541763-541919:-1:exon
so has part: feature:540621-540824:-1:exon
so has part: feature:539807-540364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544823-545085:-1:exon

position:544823:-1
position: 544823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:544600-544724:-1:exon

position:544600:-1
position: 544600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544724:-1
position: 544724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:544165-544212:-1:exon

position:544165:-1
position: 544165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544212:-1
position: 544212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:543232-543417:-1:exon

position:543232:-1
position: 543232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543417:-1
position: 543417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:541763-541919:-1:exon

position:541763:-1
position: 541763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541919:-1
position: 541919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:540621-540824:-1:exon

position:540621:-1
position: 540621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540824:-1
position: 540824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:539807-540364:-1:exon

position:540364:-1
position: 540364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fdxacb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: fdxacb1
product: ferredoxin-fold anticodon binding domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015337348.1
SIO_010081: fdxacb1
subclass of: SO_0000673
so part of: fdxacb1
location: complement(join(539807..540364,540621..540824,541763..541919,543232..543417,544165..544212,544600..545085))
location: region:539807-545085:-1
so has part: feature:544600-545085:-1:exon
so has part: feature:544165-544212:-1:exon
so has part: feature:543232-543417:-1:exon
so has part: feature:541763-541919:-1:exon
so has part: feature:540621-540824:-1:exon
so has part: feature:539807-540364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544600-545085:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:544165-544212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543232-543417:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541763-541919:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:540621-540824:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:539807-540364:-1:exon

fdxacb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: fdxacb1
product: ferredoxin-fold anticodon binding domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015337349.1
SIO_010081: fdxacb1
subclass of: SO_0000673
so part of: fdxacb1
location: complement(join(539807..540364,540621..540824,541763..541919,543232..543417,544165..544212,544536..545085))
location: region:539807-545085:-1
so has part: feature:544536-545085:-1:exon
so has part: feature:544165-544212:-1:exon
so has part: feature:543232-543417:-1:exon
so has part: feature:541763-541919:-1:exon
so has part: feature:540621-540824:-1:exon
so has part: feature:539807-540364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544536-545085:-1:exon

position:544536:-1
position: 544536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:544165-544212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543232-543417:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541763-541919:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:540621-540824:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:539807-540364:-1:exon

fdxacb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: fdxacb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ferredoxin-fold anticodon-binding domain-containing protein 1 isoform X3
translation: MSSPCGFLQGVVNRSSHSELFFFLLTLLCTFDNSVYLVSYGELLRKFPREIQRAQLLDRRAGNSREAERRNLQSYQYLDKPILFFQRSETGLLKSHIPSMDPSSAAVRDPRDVLLLGEGNFSFAAALCQAGGGSPRVTATCYQAEEAVLQQEGAEENIQLLREHGAEVHFAVDSTRLGECPALAGQLFDHIIFNFPHCGRKAGVKRNRSLLAKFFLSCAQVLKDSGEVHVTLCNGQGGTPADQPMREWHNSWQAVAMAAEAGFILSEIRPFDGAKYHGYRSTGYRSQDKTFHAEGALTHVFTRSLPCAPPESVQAEARLARGSVGFEVPEELSHSFGRYWSRERAGGPSWPPTPTLRGVSAPRFRK
SIO_010081: fdxacb1
subclass of: SO_0000673
so part of: fdxacb1
location: complement(join(540118..540364,540621..540824,541763..541919,543232..543417,544165..544212,544600..544724,544823..544956))
location: region:540118-544956:-1
so has part: feature:544823-544956:-1:exon
so has part: feature:544600-544724:-1:exon
so has part: feature:544165-544212:-1:exon
so has part: feature:543232-543417:-1:exon
so has part: feature:541763-541919:-1:exon
so has part: feature:540621-540824:-1:exon
so has part: feature:540118-540364:-1:exon

XP_015192837.1
type: Protein
SIO_000068: ncbiprotein

position:540118:-1
position: 540118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544956:-1
position: 544956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544823-544956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:544600-544724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544165-544212:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:543232-543417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541763-541919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540621-540824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540118-540364:-1:exon

fdxacb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: fdxacb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ferredoxin-fold anticodon-binding domain-containing protein 1 isoform X1
translation: MDPSSAAVRDPRDVLLLGEGNFSFAAALCQAGGGSPRVTATCYQAEEAVLQQEGAEENIQLLREHGAEVHFAVDSTRLGECPALAGQLFDHIIFNFPHCGRKAGVKRNRSLLAKFFLSCAQVLKDSGEVHVTLCNGQGGTPADQPMREWHNSWQAVAMAAEAGFILSEIRPFDGAKYHGYRSTGYRSQDKTFHAEGALTHVFTRSLPCAPPESVQAEARLARGSVGFEVPEELSHSFGRYWSRERAGGPSWPPTPTLRGVSAPRFRK
SIO_010081: fdxacb1
subclass of: SO_0000673
so part of: fdxacb1
location: complement(join(540118..540364,540621..540824,541763..541919,543232..543417,544165..544174))
location: region:540118-544174:-1
so has part: feature:544165-544174:-1:exon
so has part: feature:543232-543417:-1:exon
so has part: feature:541763-541919:-1:exon
so has part: feature:540621-540824:-1:exon
so has part: feature:540118-540364:-1:exon

XP_015192834.1
type: Protein
SIO_000068: ncbiprotein

position:544174:-1
position: 544174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544165-544174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:543232-543417:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:541763-541919:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:540621-540824:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:540118-540364:-1:exon

fdxacb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: fdxacb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ferredoxin-fold anticodon-binding domain-containing protein 1 isoform X1
translation: MDPSSAAVRDPRDVLLLGEGNFSFAAALCQAGGGSPRVTATCYQAEEAVLQQEGAEENIQLLREHGAEVHFAVDSTRLGECPALAGQLFDHIIFNFPHCGRKAGVKRNRSLLAKFFLSCAQVLKDSGEVHVTLCNGQGGTPADQPMREWHNSWQAVAMAAEAGFILSEIRPFDGAKYHGYRSTGYRSQDKTFHAEGALTHVFTRSLPCAPPESVQAEARLARGSVGFEVPEELSHSFGRYWSRERAGGPSWPPTPTLRGVSAPRFRK
SIO_010081: fdxacb1
subclass of: SO_0000673
so part of: fdxacb1
location: complement(join(540118..540364,540621..540824,541763..541919,543232..543417,544165..544174))
location: region:540118-544174:-1
so has part: feature:544165-544174:-1:exon
so has part: feature:543232-543417:-1:exon
so has part: feature:541763-541919:-1:exon
so has part: feature:540621-540824:-1:exon
so has part: feature:540118-540364:-1:exon

XP_015192835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:544165-544174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:543232-543417:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:541763-541919:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:540621-540824:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:540118-540364:-1:exon

fdxacb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: fdxacb1
product: ferredoxin-fold anticodon binding domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015337350.1
SIO_010081: fdxacb1
subclass of: SO_0000673
so part of: fdxacb1
location: complement(join(541024..541179,541763..541919,543232..543417,544165..544212,544600..544724,544823..545085))
location: region:541024-545085:-1
so has part: feature:544823-545085:-1:exon
so has part: feature:544600-544724:-1:exon
so has part: feature:544165-544212:-1:exon
so has part: feature:543232-543417:-1:exon
so has part: feature:541763-541919:-1:exon
so has part: feature:541024-541179:-1:exon

position:541024:-1
position: 541024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544823-545085:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:544600-544724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544165-544212:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:543232-543417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541763-541919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:541024-541179:-1:exon

position:541179:-1
position: 541179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fdxacb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: fdxacb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ferredoxin-fold anticodon-binding domain-containing protein 1 isoform X2
translation: MSSPCGFLQGVVNRSSHSELFFFLLTLLCTFDNSVYLVSYGELLRKFPREIQRAQLLDRRAGNSREAERRNLQSYQYLDKPILFFQRSETGLLKSHIPSMDPSSAAVRDPRDVLLLGEGNFSFAAALCQAGGGSPRVTATCYQAEEAVLQQEGAEENIQLLREHGAEVHFAVDSTRLGECPALAGQLFDHIIFNFPHCGRKAGVKRNRSLLAKFFLSNDAASNSDDAQPRRHLDMWGGE
SIO_010081: fdxacb1
subclass of: SO_0000673
so part of: fdxacb1
location: complement(join(541110..541179,541763..541919,543232..543417,544165..544212,544600..544724,544823..544956))
location: region:541110-544956:-1
so has part: feature:544823-544956:-1:exon
so has part: feature:544600-544724:-1:exon
so has part: feature:544165-544212:-1:exon
so has part: feature:543232-543417:-1:exon
so has part: feature:541763-541919:-1:exon
so has part: feature:541110-541179:-1:exon

XP_015192836.1
type: Protein
SIO_000068: ncbiprotein

position:541110:-1
position: 541110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544823-544956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:544600-544724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544165-544212:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:543232-543417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541763-541919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:541110-541179:-1:exon

mia
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: mia
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 546918..549076
location: region:546918-549076:1
so has part: feature:546918-549076:1:exon
subclass of: SO_0000010

102698792
type: Gene
SIO_000068: ncbigene

position:546918:1
position: 546918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549076:1
position: 549076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546918-549076:1:exon

mia
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mia
product: melanoma inhibitory activity
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_015337585.1
SIO_010081: mia
subclass of: SO_0000673
so part of: mia
location: join(546918..547080,547684..547817,548139..548249,548545..549076)
location: region:546918-549076:1
so has part: feature:546918-547080:1:exon
so has part: feature:547684-547817:1:exon
so has part: feature:548139-548249:1:exon
so has part: feature:548545-549076:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:546918-547080:1:exon

position:547080:1
position: 547080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:547684-547817:1:exon

position:547684:1
position: 547684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547817:1
position: 547817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:548139-548249:1:exon

position:548139:1
position: 548139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548249:1
position: 548249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:548545-549076:1:exon

position:548545:1
position: 548545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mia
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mia
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: melanoma-derived growth regulatory protein
translation: MARRFPLLLLVLGSLCLAPAWGGRQMPKLSDKKMCADEECSHPILIARALEDFYPQDCRFIPIRQGQLIYVYAMLKDRGNLFWAGSVQGEYYGEQEARLGHFPSSAVEETHVLMPASVEVNTDKWDFYCH
SIO_010081: mia
subclass of: SO_0000673
so part of: mia
location: join(546957..547080,547684..547817,548139..548249,548545..548568)
location: region:546957-548568:1
so has part: feature:546957-547080:1:exon
so has part: feature:547684-547817:1:exon
so has part: feature:548139-548249:1:exon
so has part: feature:548545-548568:1:exon

XP_015193071.1
type: Protein
SIO_000068: ncbiprotein

position:546957:1
position: 546957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548568:1
position: 548568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546957-547080:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:547684-547817:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548139-548249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:548545-548568:1:exon

clg26h11orf1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: clg26h11orf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 549551..553703
location: region:549551-553703:1
so has part: feature:549551-553703:1:exon
subclass of: SO_0000010

102698990
type: Gene
SIO_000068: ncbigene

position:549551:1
position: 549551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553703:1
position: 553703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549551-553703:1:exon

clg26h11orf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: clg26h11orf1
product: chromosome LG26 open reading frame, human C11orf1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_006642195.2
SIO_010081: clg26h11orf1
subclass of: SO_0000673
so part of: clg26h11orf1
location: join(549551..550001,550646..550816,551315..551387,552547..552730,553571..553703)
location: region:549551-553703:1
so has part: feature:549551-550001:1:exon
so has part: feature:550646-550816:1:exon
so has part: feature:551315-551387:1:exon
so has part: feature:552547-552730:1:exon
so has part: feature:553571-553703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:549551-550001:1:exon

position:550001:1
position: 550001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550646-550816:1:exon

position:550646:1
position: 550646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550816:1
position: 550816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:551315-551387:1:exon

position:551315:1
position: 551315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551387:1
position: 551387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552547-552730:1:exon

position:552547:1
position: 552547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552730:1
position: 552730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:553571-553703:1:exon

position:553571:1
position: 553571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

clg26h11orf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: clg26h11orf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0686 protein C11orf1 homolog
translation: MSSPWQQPDATFRQYGWRRGTGEDAYSPATLVGNWAEERRDTRALARRRPLPSQFAHYFETTYSSTYDRGRQPPPRDPGTKREPRCFPGHQPELDPLHTKPAPDSCYRHDFRDPAPHLQAQRGTQAGQQSNSSQSSTCWGSARPLSRAEPSRAEPTHRLQERADSTDTAELSDNRLQLSPCKG
SIO_010081: clg26h11orf1
subclass of: SO_0000673
so part of: clg26h11orf1
location: join(550655..550816,551315..551387,552547..552730,553571..553703)
location: region:550655-553703:1
so has part: feature:550655-550816:1:exon
so has part: feature:551315-551387:1:exon
so has part: feature:552547-552730:1:exon
so has part: feature:553571-553703:1:exon

XP_006642258.2
type: Protein
SIO_000068: ncbiprotein

position:550655:1
position: 550655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550655-550816:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551315-551387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552547-552730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553571-553703:1:exon

cryab
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: cryab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(553385..557151)
location: region:553385-557151:-1
so has part: feature:553385-557151:-1:exon
subclass of: SO_0000010

102689150
type: Gene
SIO_000068: ncbigene

position:553385:-1
position: 553385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557151:-1
position: 557151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553385-557151:-1:exon

cryab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cryab
product: crystallin alpha B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_006642147.2
SIO_010081: cryab
subclass of: SO_0000673
so part of: cryab
location: complement(join(553385..555213,555390..555512,556810..557151))
location: region:553385-557151:-1
so has part: feature:556810-557151:-1:exon
so has part: feature:555390-555512:-1:exon
so has part: feature:553385-555213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:556810-557151:-1:exon

position:556810:-1
position: 556810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:555390-555512:-1:exon

position:555390:-1
position: 555390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555512:-1
position: 555512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:553385-555213:-1:exon

position:555213:-1
position: 555213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cryab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cryab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-crystallin B chain
translation: MDIAIQRPWFRRPLFSSLFPVRIFEQNFGEHIPESELLAPFPLMYWPRASFRGASWMDGGLSEMRLDKDRFAIHLDVKHFSPEELSVKVNGDFIEIRGKHEDRQDEHGYVSREFHRKYRIPGGVEPGSITSSLSADGVLTISATRNLSEVAERTIPITRDDKPAGAAPQKK
SIO_010081: cryab
subclass of: SO_0000673
so part of: cryab
location: complement(join(555010..555213,555390..555512,556810..556998))
location: region:555010-556998:-1
so has part: feature:556810-556998:-1:exon
so has part: feature:555390-555512:-1:exon
so has part: feature:555010-555213:-1:exon

XP_006642210.1
type: Protein
SIO_000068: ncbiprotein

position:555010:-1
position: 555010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556998:-1
position: 556998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556810-556998:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:555390-555512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555010-555213:-1:exon

hspb2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: hspb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 559776..562537
location: region:559776-562537:1
so has part: feature:559776-562537:1:exon
subclass of: SO_0000010

102699184
type: Gene
SIO_000068: ncbigene

position:559776:1
position: 559776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562537:1
position: 562537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559776-562537:1:exon

hspb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: hspb2
product: heat shock protein family B (small) member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_006642196.2
SIO_010081: hspb2
subclass of: SO_0000673
so part of: hspb2
location: join(559776..559987,562021..562537)
location: region:559776-562537:1
so has part: feature:559776-559987:1:exon
so has part: feature:562021-562537:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:559776-559987:1:exon

position:559987:1
position: 559987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:562021-562537:1:exon

position:562021:1
position: 562021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hspb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: hspb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock protein beta-2
translation: MSERTVPHAYPMSVEYEMASPCRIYDQNFGEGLSPQDVLAPTLYHGYYIRPRLNKQLERGFSQVDSGDDWFRVLLDVCQFTPDEIAVRTVDNLLEVSGQHAQRLDQHGFVSRQFSRTYILPLGVDPLLVQVTLSHDGVLCAEAPRKAADVKPTVRELQVRVEGGEKQHKEAGKST
SIO_010081: hspb2
subclass of: SO_0000673
so part of: hspb2
location: join(559894..559987,562021..562454)
location: region:559894-562454:1
so has part: feature:559894-559987:1:exon
so has part: feature:562021-562454:1:exon

XP_006642259.1
type: Protein
SIO_000068: ncbiprotein

position:559894:1
position: 559894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562454:1
position: 562454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559894-559987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:562021-562454:1:exon

LOC107075602
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 564849..569313
location: region:564849-569313:1
so has part: feature:564849-569313:1:exon
subclass of: SO_0000010

107075602
type: Gene
SIO_000068: ncbigene

position:564849:1
position: 564849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569313:1
position: 569313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564849-569313:1:exon

LOC107075602
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107075602
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_015337337.1
SIO_010081: LOC107075602
subclass of: SO_0000673
so part of: LOC107075602
location: join(564849..565019,565828..565868,566461..566486,567341..569313)
location: region:564849-569313:1
so has part: feature:564849-565019:1:exon
so has part: feature:565828-565868:1:exon
so has part: feature:566461-566486:1:exon
so has part: feature:567341-569313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:564849-565019:1:exon

position:565019:1
position: 565019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565828-565868:1:exon

position:565828:1
position: 565828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565868:1
position: 565868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:566461-566486:1:exon

position:566461:1
position: 566461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566486:1
position: 566486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:567341-569313:1:exon

position:567341:1
position: 567341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107075602
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107075602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like
translation: MGNRITKGVDKRGLKSPNKKDQKKDGKADLSQQEEAHMYDAVAEMPIYSVVNKRRKAGGQRQEELHYAEIQVLQGPPSSSRGSSAPALRQSSSTEYATIDFQPPPPPPHGPPRKASGPPRAASARARTAAKPAEIRIPSGTVKRPAPRPQPRKGTLV
SIO_010081: LOC107075602
subclass of: SO_0000673
so part of: LOC107075602
location: join(564988..565019,565828..565868,566461..566486,567341..567715)
location: region:564988-567715:1
so has part: feature:564988-565019:1:exon
so has part: feature:565828-565868:1:exon
so has part: feature:566461-566486:1:exon
so has part: feature:567341-567715:1:exon

XP_015192823.1
type: Protein
SIO_000068: ncbiprotein

position:564988:1
position: 564988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567715:1
position: 567715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564988-565019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565828-565868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:566461-566486:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567341-567715:1:exon

dixdc1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: dixdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 575983..605946
location: region:575983-605946:1
so has part: feature:575983-605946:1:exon
subclass of: SO_0000010

102682272
type: Gene
SIO_000068: ncbigene

position:575983:1
position: 575983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605946:1
position: 605946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575983-605946:1:exon

dixdc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: dixdc1
product: DIX domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015337360.1
SIO_010081: dixdc1
subclass of: SO_0000673
so part of: dixdc1
location: join(575983..576159,579728..579857,579958..580053,583688..583727,584286..584405,592717..592829,593404..593665,596236..596255,596407..596697,598541..598671,602749..602869,603051..603159,603559..603667,604531..605946)
location: region:575983-605946:1
so has part: feature:575983-576159:1:exon
so has part: feature:579728-579857:1:exon
so has part: feature:579958-580053:1:exon
so has part: feature:583688-583727:1:exon
so has part: feature:584286-584405:1:exon
so has part: feature:592717-592829:1:exon
so has part: feature:593404-593665:1:exon
so has part: feature:596236-596255:1:exon
so has part: feature:596407-596697:1:exon
so has part: feature:598541-598671:1:exon
so has part: feature:602749-602869:1:exon
so has part: feature:603051-603159:1:exon
so has part: feature:603559-603667:1:exon
so has part: feature:604531-605946:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:575983-576159:1:exon

position:576159:1
position: 576159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:579728-579857:1:exon

position:579728:1
position: 579728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579857:1
position: 579857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:579958-580053:1:exon

position:579958:1
position: 579958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580053:1
position: 580053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:583688-583727:1:exon

position:583688:1
position: 583688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583727:1
position: 583727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:584286-584405:1:exon

position:584286:1
position: 584286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584405:1
position: 584405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:592717-592829:1:exon

position:592717:1
position: 592717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592829:1
position: 592829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:593404-593665:1:exon

position:593404:1
position: 593404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593665:1
position: 593665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:596236-596255:1:exon

position:596236:1
position: 596236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596255:1
position: 596255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:596407-596697:1:exon

position:596407:1
position: 596407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596697:1
position: 596697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:598541-598671:1:exon

position:598541:1
position: 598541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598671:1
position: 598671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:602749-602869:1:exon

position:602749:1
position: 602749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602869:1
position: 602869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:603051-603159:1:exon

position:603051:1
position: 603051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603159:1
position: 603159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:603559-603667:1:exon

position:603559:1
position: 603559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603667:1
position: 603667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:604531-605946:1:exon

position:604531:1
position: 604531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dixdc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: dixdc1
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:598561..598563,aa:OTHER)
product: LOW QUALITY PROTEIN: dixin
translation: MIASLSRGNLLDVLQEGFNEQQLQAYVSWVNSQLRRRPGLQPVQDLRRDLRDGVVLAHLVEIVAGELLEGVHYSPADPQEMRENVEKVLQFVASKLERRLAVKDRLTTRRSSSVDEEIENPSWSVRALVQQYEGQREAPAGDSEALPSGLSSPSPAHTPKGELAVGQSESQEAKLSAQLEEARCKAEVLVMAPLGGPVGAGEGSSWEDQLLEQQEQLEREMEEARRMISSLQVSPGTSGTFSVSGDTRRSGTALKRRKEAESIGNALSHPTSHKVHSFQPKLTRATSPAVVLGLFCFLLCSSLTTLCSLPVSLSALLPSRCFSVLLFLSDSDRPLGLSLSQDALQQRMSLQESSVLQLKQELLRASMARDELHSQNVNNTKRPEXQQPVVCLCVSVQKELGHKDRLLQQQQLKLDEALRKVEQAARGSLSPSLCACVPQSRGKSPGRRAAQSDRDSWPPSSKMSHSHSSPVLSSSATTKVLYFTDRSLTPFMVNIPKRLGEVTLRDFKAAVDREGSYRYHFKALDPEFGTVKEEVFHDDAVVPGWEGKIVAWVEEDHGEDRQSWWQGDPTKE
SIO_010081: dixdc1
subclass of: SO_0000673
so part of: dixdc1
location: join(576100..576159,579728..579857,579958..580053,583688..583727,584286..584405,592717..592829,593404..593665,596236..596255,596407..596697,598541..598671,602749..602869,603051..603159,603559..603667,604531..604647)
location: region:576100-604647:1
so has part: feature:576100-576159:1:exon
so has part: feature:579728-579857:1:exon
so has part: feature:579958-580053:1:exon
so has part: feature:583688-583727:1:exon
so has part: feature:584286-584405:1:exon
so has part: feature:592717-592829:1:exon
so has part: feature:593404-593665:1:exon
so has part: feature:596236-596255:1:exon
so has part: feature:596407-596697:1:exon
so has part: feature:598541-598671:1:exon
so has part: feature:602749-602869:1:exon
so has part: feature:603051-603159:1:exon
so has part: feature:603559-603667:1:exon
so has part: feature:604531-604647:1:exon

XP_015192846.1
type: Protein
SIO_000068: ncbiprotein

position:576100:1
position: 576100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604647:1
position: 604647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576100-576159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579728-579857:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:579958-580053:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583688-583727:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584286-584405:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:592717-592829:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:593404-593665:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:596236-596255:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596407-596697:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:598541-598671:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:602749-602869:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:603051-603159:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:603559-603667:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:604531-604647:1:exon

dlat
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: dlat
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 610043..619537
location: region:610043-619537:1
so has part: feature:610043-619537:1:exon
subclass of: SO_0000010

102689355
type: Gene
SIO_000068: ncbigene

position:610043:1
position: 610043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619537:1
position: 619537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610043-619537:1:exon

dlat
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: dlat
product: dihydrolipoamide S-acetyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015337442.1
SIO_010081: dlat
subclass of: SO_0000673
so part of: dlat
location: join(610043..610501,611681..611782,611952..612076,612514..612664,612976..613102,613501..613694,614111..614249,614717..614784,615069..615170,615290..615397,615662..615780,616036..616198,616450..616586,617121..619537)
location: region:610043-619537:1
so has part: feature:610043-610501:1:exon
so has part: feature:611681-611782:1:exon
so has part: feature:611952-612076:1:exon
so has part: feature:612514-612664:1:exon
so has part: feature:612976-613102:1:exon
so has part: feature:613501-613694:1:exon
so has part: feature:614111-614249:1:exon
so has part: feature:614717-614784:1:exon
so has part: feature:615069-615170:1:exon
so has part: feature:615290-615397:1:exon
so has part: feature:615662-615780:1:exon
so has part: feature:616036-616198:1:exon
so has part: feature:616450-616586:1:exon
so has part: feature:617121-619537:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:610043-610501:1:exon

position:610501:1
position: 610501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:611681-611782:1:exon

position:611681:1
position: 611681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611782:1
position: 611782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:611952-612076:1:exon

position:611952:1
position: 611952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612076:1
position: 612076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:612514-612664:1:exon

position:612514:1
position: 612514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612664:1
position: 612664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:612976-613102:1:exon

position:612976:1
position: 612976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613102:1
position: 613102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:613501-613694:1:exon

position:613501:1
position: 613501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613694:1
position: 613694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:614111-614249:1:exon

position:614111:1
position: 614111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614249:1
position: 614249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:614717-614784:1:exon

position:614717:1
position: 614717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614784:1
position: 614784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:615069-615170:1:exon

position:615069:1
position: 615069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615170:1
position: 615170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:615290-615397:1:exon

position:615290:1
position: 615290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615397:1
position: 615397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:615662-615780:1:exon

position:615662:1
position: 615662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615780:1
position: 615780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:616036-616198:1:exon

position:616036:1
position: 616036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616198:1
position: 616198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:616450-616586:1:exon

position:616450:1
position: 616450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616586:1
position: 616586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:617121-619537:1:exon

position:617121:1
position: 617121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dlat
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: dlat
product: dihydrolipoamide S-acetyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006642148.2
SIO_010081: dlat
subclass of: SO_0000673
so part of: dlat
location: join(610044..610501,611681..611782,611952..612076,612514..612664,612976..613102,613501..613694,614111..614249,614717..614784,615072..615170,615290..615397,615662..615780,616036..616198,616450..616586,617121..619537)
location: region:610044-619537:1
so has part: feature:610044-610501:1:exon
so has part: feature:611681-611782:1:exon
so has part: feature:611952-612076:1:exon
so has part: feature:612514-612664:1:exon
so has part: feature:612976-613102:1:exon
so has part: feature:613501-613694:1:exon
so has part: feature:614111-614249:1:exon
so has part: feature:614717-614784:1:exon
so has part: feature:615072-615170:1:exon
so has part: feature:615290-615397:1:exon
so has part: feature:615662-615780:1:exon
so has part: feature:616036-616198:1:exon
so has part: feature:616450-616586:1:exon
so has part: feature:617121-619537:1:exon

position:610044:1
position: 610044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610044-610501:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611681-611782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611952-612076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:612514-612664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:612976-613102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:613501-613694:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:614111-614249:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614717-614784:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:615072-615170:1:exon

position:615072:1
position: 615072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:615290-615397:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:615662-615780:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:616036-616198:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:616450-616586:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:617121-619537:1:exon

dlat
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: dlat
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial isoform X1
translation: MLRWAVRLRQSVRVPRFGPGSAPGMSSRPGSCRLRRYHSGGSARVRPVCYATAVTCGRGGFLQSYLSARSCQGKRLYSLPPHQKVVLPALSPTMQNGTIARWEKKEGDKISEGDLIAEVETDKATVGFEILEECYLAKILVAEGTRDVPIGAVICITVESPDLVPAFKDYTLDMASAPPSPAATAAVAAPPPPAAAPPQPPGSSYPPHMKVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGFLAKVLVSEGTRDVPLGTPLCIIVEKESDIGAFADYVETGVAEIKSPPPAPAPAPAPVAAVPPLSQQSIPAATPVPPAGAKAFASPLAKKLAAEKGIDLAKVRGSGPDGRITRKDIESFVPPKAAPQAPAAAVAPVPGAPPAPAVPSGTFTDIPIGNIRRVIAQRLMQSKQTIPHYYLSIDINMDQVLELRKELNEELKAENIKLSVNDFIIKASALACVKVPEANSSWMDTVIRQNHVVDMSVAVSTANGLITPIVFNAHIKGLASISQDVAALAARAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAVGGSEKRLLPADNEKGFDVANVMAVTLSCDHRVVDGAVGAQWLAEFRKFVEKPVTMLL
SIO_010081: dlat
subclass of: SO_0000673
so part of: dlat
location: join(610250..610501,611681..611782,611952..612076,612514..612664,612976..613102,613501..613694,614111..614249,614717..614784,615069..615170,615290..615397,615662..615780,616036..616198,616450..616586,617121..617250)
location: region:610250-617250:1
so has part: feature:610250-610501:1:exon
so has part: feature:611681-611782:1:exon
so has part: feature:611952-612076:1:exon
so has part: feature:612514-612664:1:exon
so has part: feature:612976-613102:1:exon
so has part: feature:613501-613694:1:exon
so has part: feature:614111-614249:1:exon
so has part: feature:614717-614784:1:exon
so has part: feature:615069-615170:1:exon
so has part: feature:615290-615397:1:exon
so has part: feature:615662-615780:1:exon
so has part: feature:616036-616198:1:exon
so has part: feature:616450-616586:1:exon
so has part: feature:617121-617250:1:exon

XP_015192928.1
type: Protein
SIO_000068: ncbiprotein

position:610250:1
position: 610250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617250:1
position: 617250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610250-610501:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611681-611782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611952-612076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:612514-612664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:612976-613102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:613501-613694:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:614111-614249:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614717-614784:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:615069-615170:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:615290-615397:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:615662-615780:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:616036-616198:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:616450-616586:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:617121-617250:1:exon

dlat
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: dlat
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial isoform X2
translation: MLRWAVRLRQSVRVPRFGPGSAPGMSSRPGSCRLRRYHSGGSARVRPVCYATAVTCGRGGFLQSYLSARSCQGKRLYSLPPHQKVVLPALSPTMQNGTIARWEKKEGDKISEGDLIAEVETDKATVGFEILEECYLAKILVAEGTRDVPIGAVICITVESPDLVPAFKDYTLDMASAPPSPAATAAVAAPPPPAAAPPQPPGSSYPPHMKVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGFLAKVLVSEGTRDVPLGTPLCIIVEKESDIGAFADYVETGVAEIKSPPPAPAPAPAPVAAVPPLSQQSIPAATPVPPAGAKAFASPLAKKLAAEKGIDLAKVRGSGPDGRITRKDIESFVPPKAAPAPAAAVAPVPGAPPAPAVPSGTFTDIPIGNIRRVIAQRLMQSKQTIPHYYLSIDINMDQVLELRKELNEELKAENIKLSVNDFIIKASALACVKVPEANSSWMDTVIRQNHVVDMSVAVSTANGLITPIVFNAHIKGLASISQDVAALAARAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAVGGSEKRLLPADNEKGFDVANVMAVTLSCDHRVVDGAVGAQWLAEFRKFVEKPVTMLL
SIO_010081: dlat
subclass of: SO_0000673
so part of: dlat
location: join(610250..610501,611681..611782,611952..612076,612514..612664,612976..613102,613501..613694,614111..614249,614717..614784,615072..615170,615290..615397,615662..615780,616036..616198,616450..616586,617121..617250)
location: region:610250-617250:1
so has part: feature:610250-610501:1:exon
so has part: feature:611681-611782:1:exon
so has part: feature:611952-612076:1:exon
so has part: feature:612514-612664:1:exon
so has part: feature:612976-613102:1:exon
so has part: feature:613501-613694:1:exon
so has part: feature:614111-614249:1:exon
so has part: feature:614717-614784:1:exon
so has part: feature:615072-615170:1:exon
so has part: feature:615290-615397:1:exon
so has part: feature:615662-615780:1:exon
so has part: feature:616036-616198:1:exon
so has part: feature:616450-616586:1:exon
so has part: feature:617121-617250:1:exon

XP_006642211.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:610250-610501:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611681-611782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611952-612076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:612514-612664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:612976-613102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:613501-613694:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:614111-614249:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614717-614784:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:615072-615170:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:615290-615397:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:615662-615780:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:616036-616198:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:616450-616586:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:617121-617250:1:exon

pih1d2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: pih1d2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(619806..625917)
location: region:619806-625917:-1
so has part: feature:619806-625917:-1:exon
subclass of: SO_0000010

102682470
type: Gene
SIO_000068: ncbigene

position:619806:-1
position: 619806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625917:-1
position: 625917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619806-625917:-1:exon

pih1d2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: pih1d2
product: PIH1 domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015337443.1
SIO_010081: pih1d2
subclass of: SO_0000673
so part of: pih1d2
location: complement(join(619806..619983,620238..620518,621554..621787,622574..622697,623551..623740,625825..625917))
location: region:619806-625917:-1
so has part: feature:625825-625917:-1:exon
so has part: feature:623551-623740:-1:exon
so has part: feature:622574-622697:-1:exon
so has part: feature:621554-621787:-1:exon
so has part: feature:620238-620518:-1:exon
so has part: feature:619806-619983:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:625825-625917:-1:exon

position:625825:-1
position: 625825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623551-623740:-1:exon

position:623551:-1
position: 623551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623740:-1
position: 623740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:622574-622697:-1:exon

position:622574:-1
position: 622574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622697:-1
position: 622697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:621554-621787:-1:exon

position:621554:-1
position: 621554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621787:-1
position: 621787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:620238-620518:-1:exon

position:620238:-1
position: 620238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620518:-1
position: 620518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:619806-619983:-1:exon

position:619983:-1
position: 619983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pih1d2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: pih1d2
product: PIH1 domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_006642198.2
SIO_010081: pih1d2
subclass of: SO_0000673
so part of: pih1d2
location: complement(join(619806..619983,620238..620521,621554..621787,622574..622697,623551..623740,625825..625916))
location: region:619806-625916:-1
so has part: feature:625825-625916:-1:exon
so has part: feature:623551-623740:-1:exon
so has part: feature:622574-622697:-1:exon
so has part: feature:621554-621787:-1:exon
so has part: feature:620238-620521:-1:exon
so has part: feature:619806-619983:-1:exon

position:625916:-1
position: 625916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625825-625916:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623551-623740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622574-622697:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621554-621787:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620238-620521:-1:exon

position:620521:-1
position: 620521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:619806-619983:-1:exon

pih1d2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: pih1d2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PIH1 domain-containing protein 2 isoform X2
translation: MAAPCSQQAVLQQVSQLWSLLDDLSESSPEGYRRFIQQQLKDGADYYSSPQAHSCLRTEILEPEEGVLYVNVCSWKRVPTPESHSSPVPLCASKLATGAEGKEVYSVIDVAFSPETLRRAEGDGEERDQLLRLALLYAEQNHGLRLSPCYTLTSANIKGPTQRMRDRLATPLNTSAHSAPEGGSLLQQICALQQNKEKEEEKGCSQLFPQEVTNPAKGGLIQELSSTTTVAQPQEPRYKLAVIQDGEGRPHTLQLTVDLPGISSISECKLSISQDDVLIEVEDLYHLQLDLPETVNEEAASATFSKKTRILSVTVPIL
SIO_010081: pih1d2
subclass of: SO_0000673
so part of: pih1d2
location: complement(join(619849..619983,620238..620518,621554..621787,622574..622697,623551..623733))
location: region:619849-623733:-1
so has part: feature:623551-623733:-1:exon
so has part: feature:622574-622697:-1:exon
so has part: feature:621554-621787:-1:exon
so has part: feature:620238-620518:-1:exon
so has part: feature:619849-619983:-1:exon

XP_015192929.1
type: Protein
SIO_000068: ncbiprotein

position:619849:-1
position: 619849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623733:-1
position: 623733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623551-623733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622574-622697:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621554-621787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620238-620518:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:619849-619983:-1:exon

pih1d2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: pih1d2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PIH1 domain-containing protein 2 isoform X1
translation: MAAPCSQQAVLQQVSQLWSLLDDLSESSPEGYRRFIQQQLKDGADYYSSPQAHSCLRTEILEPEEGVLYVNVCSWKRVPTPESHSSPVPLCASKLATGAEGKEVYSVIDVAFSPETLRRAEGDGEERDQLLRLALLYAEQNHGLRLSPCYTLTSANIKGPTQRMRDRLATPLNTSAHSAPEEGGSLLQQICALQQNKEKEEEKGCSQLFPQEVTNPAKGGLIQELSSTTTVAQPQEPRYKLAVIQDGEGRPHTLQLTVDLPGISSISECKLSISQDDVLIEVEDLYHLQLDLPETVNEEAASATFSKKTRILSVTVPIL
SIO_010081: pih1d2
subclass of: SO_0000673
so part of: pih1d2
location: complement(join(619849..619983,620238..620521,621554..621787,622574..622697,623551..623733))
location: region:619849-623733:-1
so has part: feature:623551-623733:-1:exon
so has part: feature:622574-622697:-1:exon
so has part: feature:621554-621787:-1:exon
so has part: feature:620238-620521:-1:exon
so has part: feature:619849-619983:-1:exon

XP_006642261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:623551-623733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622574-622697:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621554-621787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620238-620521:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:619849-619983:-1:exon

trnag-ccc
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: trnag-ccc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(622213..622283)
location: region:622213-622283:-1
so has part: feature:622213-622283:-1:exon
subclass of: SO_0000663

102659349
type: Gene
SIO_000068: ncbigene

position:622213:-1
position: 622213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622283:-1
position: 622283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622213-622283:-1:exon

trnag-ccc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7918
gene: trnag-ccc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon CCC); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(622249..622251),aa:Gly,seq:ccc)
SIO_010081: trnag-ccc
subclass of: SO_0000673
so part of: trnag-ccc
location: complement(622213..622283)
location: region:622213-622283:-1
so has part: feature:622213-622283:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:622213-622283:-1:exon

clg26h11orf57
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: clg26h11orf57
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 626148..637032
location: region:626148-637032:1
so has part: feature:626148-637032:1:exon
subclass of: SO_0000010

102682677
type: Gene
SIO_000068: ncbigene

position:626148:1
position: 626148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637032:1
position: 637032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626148-637032:1:exon

clg26h11orf57
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: clg26h11orf57
product: chromosome LG26 open reading frame, human C11orf57, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_015337444.1
SIO_010081: clg26h11orf57
subclass of: SO_0000673
so part of: clg26h11orf57
location: join(626148..626248,627324..627400,628405..628508,629479..629625,629953..630006,630444..637032)
location: region:626148-637032:1
so has part: feature:626148-626248:1:exon
so has part: feature:627324-627400:1:exon
so has part: feature:628405-628508:1:exon
so has part: feature:629479-629625:1:exon
so has part: feature:629953-630006:1:exon
so has part: feature:630444-637032:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:626148-626248:1:exon

position:626248:1
position: 626248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:627324-627400:1:exon

position:627324:1
position: 627324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627400:1
position: 627400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:628405-628508:1:exon

position:628405:1
position: 628405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628508:1
position: 628508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:629479-629625:1:exon

position:629479:1
position: 629479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629625:1
position: 629625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:629953-630006:1:exon

position:629953:1
position: 629953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630006:1
position: 630006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:630444-637032:1:exon

position:630444:1
position: 630444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

clg26h11orf57
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: clg26h11orf57
product: chromosome LG26 open reading frame, human C11orf57, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_006642199.2
SIO_010081: clg26h11orf57
subclass of: SO_0000673
so part of: clg26h11orf57
location: join(627042..627122,627324..627400,628405..628508,629479..629625,629953..630006,630444..637032)
location: region:627042-637032:1
so has part: feature:627042-627122:1:exon
so has part: feature:627324-627400:1:exon
so has part: feature:628405-628508:1:exon
so has part: feature:629479-629625:1:exon
so has part: feature:629953-630006:1:exon
so has part: feature:630444-637032:1:exon

position:627042:1
position: 627042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627042-627122:1:exon

position:627122:1
position: 627122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:627324-627400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:628405-628508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:629479-629625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:629953-630006:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:630444-637032:1:exon

clg26h11orf57
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: clg26h11orf57
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C11orf57 homolog isoform X1
translation: MSSGLIMSRVPMGKVLLRNVIRHTDAHNKIQEESEMWKMREKERQTLGDHARWHRRKLDHDLSRGRMRCDGFDEEELPGDGGAATAQSSEGDVREARHWTKKLYEFEAGDPDRWGHSGFKELYPEEFETDSDQQCSDGENIHRREKAPRSASPESGRRKRSKKTLKKKTKKKAKKRKKEEEPGKRRKKSSKEKRRKRRKEKGPGGRKDSHSSSSSSSEDEETGGTPRGRRKRPHEARAESEHEEELRRKRRRRNWKVADEEKSEDSSED
SIO_010081: clg26h11orf57
subclass of: SO_0000673
so part of: clg26h11orf57
location: join(627113..627122,627324..627400,628405..628508,629479..629625,629953..630006,630444..630861)
location: region:627113-630861:1
so has part: feature:627113-627122:1:exon
so has part: feature:627324-627400:1:exon
so has part: feature:628405-628508:1:exon
so has part: feature:629479-629625:1:exon
so has part: feature:629953-630006:1:exon
so has part: feature:630444-630861:1:exon

XP_006642262.2
type: Protein
SIO_000068: ncbiprotein

position:627113:1
position: 627113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630861:1
position: 630861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627113-627122:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:627324-627400:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:628405-628508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:629479-629625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:629953-630006:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:630444-630861:1:exon

clg26h11orf57
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: clg26h11orf57
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C11orf57 homolog isoform X2
translation: MSRVPMGKVLLRNVIRHTDAHNKIQEESEMWKMREKERQTLGDHARWHRRKLDHDLSRGRMRCDGFDEEELPGDGGAATAQSSEGDVREARHWTKKLYEFEAGDPDRWGHSGFKELYPEEFETDSDQQCSDGENIHRREKAPRSASPESGRRKRSKKTLKKKTKKKAKKRKKEEEPGKRRKKSSKEKRRKRRKEKGPGGRKDSHSSSSSSSEDEETGGTPRGRRKRPHEARAESEHEEELRRKRRRRNWKVADEEKSEDSSED
SIO_010081: clg26h11orf57
subclass of: SO_0000673
so part of: clg26h11orf57
location: join(627332..627400,628405..628508,629479..629625,629953..630006,630444..630861)
location: region:627332-630861:1
so has part: feature:627332-627400:1:exon
so has part: feature:628405-628508:1:exon
so has part: feature:629479-629625:1:exon
so has part: feature:629953-630006:1:exon
so has part: feature:630444-630861:1:exon

XP_015192930.1
type: Protein
SIO_000068: ncbiprotein

position:627332:1
position: 627332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627332-627400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:628405-628508:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:629479-629625:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:629953-630006:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:630444-630861:1:exon

LOC107075640
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(632315..638439)
location: region:632315-638439:-1
so has part: feature:632315-638439:-1:exon
subclass of: SO_0000011

107075640
type: Gene
SIO_000068: ncbigene

position:632315:-1
position: 632315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638439:-1
position: 638439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632315-638439:-1:exon

LOC107075640
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075640
product: uncharacterized LOC107075640
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_001477155.1
SIO_010081: LOC107075640
subclass of: SO_0000673
so part of: LOC107075640
location: complement(join(632315..632394,637989..638131,638410..638439))
location: region:632315-638439:-1
so has part: feature:638410-638439:-1:exon
so has part: feature:637989-638131:-1:exon
so has part: feature:632315-632394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:638410-638439:-1:exon

position:638410:-1
position: 638410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:637989-638131:-1:exon

position:637989:-1
position: 637989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638131:-1
position: 638131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:632315-632394:-1:exon

position:632394:-1
position: 632394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102682876
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102682876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(638749..668364)
location: region:638749-668364:-1
so has part: feature:638749-668364:-1:exon
subclass of: SO_0000010

102682876
type: Gene
SIO_000068: ncbigene

position:638749:-1
position: 638749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668364:-1
position: 668364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:638749-668364:-1:exon

LOC102682876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102682876
product: uncharacterized LOC102682876, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015337449.1
SIO_010081: LOC102682876
subclass of: SO_0000673
so part of: LOC102682876
location: complement(join(638749..640299,652683..653012,658051..658274,668195..668364))
location: region:638749-668364:-1
so has part: feature:668195-668364:-1:exon
so has part: feature:658051-658274:-1:exon
so has part: feature:652683-653012:-1:exon
so has part: feature:638749-640299:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:668195-668364:-1:exon

position:668195:-1
position: 668195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:658051-658274:-1:exon

position:658051:-1
position: 658051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658274:-1
position: 658274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:652683-653012:-1:exon

position:652683:-1
position: 652683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653012:-1
position: 653012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:638749-640299:-1:exon

position:640299:-1
position: 640299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102682876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102682876
product: uncharacterized LOC102682876, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015337447.1
SIO_010081: LOC102682876
subclass of: SO_0000673
so part of: LOC102682876
location: complement(join(638749..640299,642044..642192,643442..644103))
location: region:638749-644103:-1
so has part: feature:643442-644103:-1:exon
so has part: feature:642044-642192:-1:exon
so has part: feature:638749-640299:-1:exon

position:644103:-1
position: 644103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643442-644103:-1:exon

position:643442:-1
position: 643442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:642044-642192:-1:exon

position:642044:-1
position: 642044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642192:-1
position: 642192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:638749-640299:-1:exon

LOC102682876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102682876
product: uncharacterized LOC102682876, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015337448.1
SIO_010081: LOC102682876
subclass of: SO_0000673
so part of: LOC102682876
location: complement(join(638749..640299,643442..643690))
location: region:638749-643690:-1
so has part: feature:643442-643690:-1:exon
so has part: feature:638749-640299:-1:exon

position:643690:-1
position: 643690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643442-643690:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638749-640299:-1:exon

LOC102682876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102682876
product: uncharacterized LOC102682876, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015337446.1
SIO_010081: LOC102682876
subclass of: SO_0000673
so part of: LOC102682876
location: complement(join(638749..640299,642044..643414))
location: region:638749-643414:-1
so has part: feature:642044-643414:-1:exon
so has part: feature:638749-640299:-1:exon

position:643414:-1
position: 643414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642044-643414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638749-640299:-1:exon

LOC102682876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102682876
product: uncharacterized LOC102682876, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015337450.1
SIO_010081: LOC102682876
subclass of: SO_0000673
so part of: LOC102682876
location: complement(join(638749..640299,641028..641063))
location: region:638749-641063:-1
so has part: feature:641028-641063:-1:exon
so has part: feature:638749-640299:-1:exon

position:641063:-1
position: 641063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641028-641063:-1:exon

position:641028:-1
position: 641028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:638749-640299:-1:exon

LOC102682876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102682876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102682876
translation: MSVEFFGWEVQYDDDQHLAAEQEPKAGRLYTMYHGTSVSQARNIIAGGFRQSPDGMLGPGVYVSRNPRKAERYPLQAPATDKVVLKLRVDTGRVKRIDTDNHPLQKTWHSHGYDTAWVPPNCGMKAVPSGLEEDCVWDPSKVEVIDVTRAPDANTQAELKGLIAQQQKGKRAAAAGADSCRLCKRRADSAHPVERCWGCGKSICTYMPRHQCV
SIO_010081: LOC102682876
subclass of: SO_0000673
so part of: LOC102682876
location: complement(639647..640288)
location: region:639647-640288:-1
so has part: feature:639647-640288:-1:exon

XP_015192932.1
type: Protein
SIO_000068: ncbiprotein

position:639647:-1
position: 639647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640288:-1
position: 640288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639647-640288:-1:exon

LOC102682876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102682876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102682876
translation: MSVEFFGWEVQYDDDQHLAAEQEPKAGRLYTMYHGTSVSQARNIIAGGFRQSPDGMLGPGVYVSRNPRKAERYPLQAPATDKVVLKLRVDTGRVKRIDTDNHPLQKTWHSHGYDTAWVPPNCGMKAVPSGLEEDCVWDPSKVEVIDVTRAPDANTQAELKGLIAQQQKGKRAAAAGADSCRLCKRRADSAHPVERCWGCGKSICTYMPRHQCV
SIO_010081: LOC102682876
subclass of: SO_0000673
so part of: LOC102682876
location: complement(639647..640288)
location: region:639647-640288:-1
so has part: feature:639647-640288:-1:exon

XP_015192933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:639647-640288:-1:exon

LOC102682876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102682876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102682876
translation: MSVEFFGWEVQYDDDQHLAAEQEPKAGRLYTMYHGTSVSQARNIIAGGFRQSPDGMLGPGVYVSRNPRKAERYPLQAPATDKVVLKLRVDTGRVKRIDTDNHPLQKTWHSHGYDTAWVPPNCGMKAVPSGLEEDCVWDPSKVEVIDVTRAPDANTQAELKGLIAQQQKGKRAAAAGADSCRLCKRRADSAHPVERCWGCGKSICTYMPRHQCV
SIO_010081: LOC102682876
subclass of: SO_0000673
so part of: LOC102682876
location: complement(639647..640288)
location: region:639647-640288:-1
so has part: feature:639647-640288:-1:exon

XP_015192934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:639647-640288:-1:exon

LOC102682876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102682876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102682876
translation: MSVEFFGWEVQYDDDQHLAAEQEPKAGRLYTMYHGTSVSQARNIIAGGFRQSPDGMLGPGVYVSRNPRKAERYPLQAPATDKVVLKLRVDTGRVKRIDTDNHPLQKTWHSHGYDTAWVPPNCGMKAVPSGLEEDCVWDPSKVEVIDVTRAPDANTQAELKGLIAQQQKGKRAAAAGADSCRLCKRRADSAHPVERCWGCGKSICTYMPRHQCV
SIO_010081: LOC102682876
subclass of: SO_0000673
so part of: LOC102682876
location: complement(639647..640288)
location: region:639647-640288:-1
so has part: feature:639647-640288:-1:exon

XP_015192935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:639647-640288:-1:exon

LOC102682876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102682876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102682876
translation: MSVEFFGWEVQYDDDQHLAAEQEPKAGRLYTMYHGTSVSQARNIIAGGFRQSPDGMLGPGVYVSRNPRKAERYPLQAPATDKVVLKLRVDTGRVKRIDTDNHPLQKTWHSHGYDTAWVPPNCGMKAVPSGLEEDCVWDPSKVEVIDVTRAPDANTQAELKGLIAQQQKGKRAAAAGADSCRLCKRRADSAHPVERCWGCGKSICTYMPRHQCV
SIO_010081: LOC102682876
subclass of: SO_0000673
so part of: LOC102682876
location: complement(639647..640288)
location: region:639647-640288:-1
so has part: feature:639647-640288:-1:exon

XP_015192936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:639647-640288:-1:exon

LOC107075643
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 641101..642652
location: region:641101-642652:1
so has part: feature:641101-642652:1:exon
subclass of: SO_0000011

107075643
type: Gene
SIO_000068: ncbigene

position:641101:1
position: 641101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642652:1
position: 642652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641101-642652:1:exon

LOC107075643
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075643
product: uncharacterized LOC107075643
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_001477159.1
SIO_010081: LOC107075643
subclass of: SO_0000673
so part of: LOC107075643
location: join(641101..641637,641890..642652)
location: region:641101-642652:1
so has part: feature:641101-641637:1:exon
so has part: feature:641890-642652:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:641101-641637:1:exon

position:641637:1
position: 641637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:641890-642652:1:exon

position:641890:1
position: 641890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107075641
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(683597..832198)
location: region:683597-832198:-1
so has part: feature:683597-832198:-1:exon
subclass of: SO_0000010

107075641
type: Gene
SIO_000068: ncbigene

position:683597:-1
position: 683597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832198:-1
position: 832198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683597-832198:-1:exon

LOC107075641
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107075641
product: uncharacterized LOC107075641, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015337451.1
SIO_010081: LOC107075641
subclass of: SO_0000673
so part of: LOC107075641
location: complement(join(683597..683841,721926..722052,763467..763553,792546..792592,829922..830045,830754..830813,831179..831295))
location: region:683597-831295:-1
so has part: feature:831179-831295:-1:exon
so has part: feature:830754-830813:-1:exon
so has part: feature:829922-830045:-1:exon
so has part: feature:792546-792592:-1:exon
so has part: feature:763467-763553:-1:exon
so has part: feature:721926-722052:-1:exon
so has part: feature:683597-683841:-1:exon

position:831295:-1
position: 831295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:831179-831295:-1:exon

position:831179:-1
position: 831179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:830754-830813:-1:exon

position:830754:-1
position: 830754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830813:-1
position: 830813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:829922-830045:-1:exon

position:829922:-1
position: 829922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830045:-1
position: 830045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:792546-792592:-1:exon

position:792546:-1
position: 792546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792592:-1
position: 792592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:763467-763553:-1:exon

position:763467:-1
position: 763467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763553:-1
position: 763553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:721926-722052:-1:exon

position:721926:-1
position: 721926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722052:-1
position: 722052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:683597-683841:-1:exon

position:683841:-1
position: 683841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107075641
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107075641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107075641 isoform X1
translation: MVAVSHVRNQIFTTMVTAGLMSTLNLHEMLEEALVVHFGCKKAQQSKLGVQPLKTCILASSTGESCEAQRKASPSEEWSPLLVSQSQTHWCICILLGVSWDSSGSVKIRAWAALTMAFFFPRTVRPTSSSQPDTILLPRVSRLD
SIO_010081: LOC107075641
subclass of: SO_0000673
so part of: LOC107075641
location: complement(join(721966..722052,763467..763553,792546..792592,829922..830045,830754..830813,831179..831208))
location: region:721966-831208:-1
so has part: feature:831179-831208:-1:exon
so has part: feature:830754-830813:-1:exon
so has part: feature:829922-830045:-1:exon
so has part: feature:792546-792592:-1:exon
so has part: feature:763467-763553:-1:exon
so has part: feature:721966-722052:-1:exon

XP_015192937.1
type: Protein
SIO_000068: ncbiprotein

position:721966:-1
position: 721966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831208:-1
position: 831208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:831179-831208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:830754-830813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:829922-830045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792546-792592:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:763467-763553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:721966-722052:-1:exon

LOC107075642
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 722672..732025
location: region:722672-732025:1
so has part: feature:722672-732025:1:exon
subclass of: SO_0000011

107075642
type: Gene
SIO_000068: ncbigene

position:722672:1
position: 722672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732025:1
position: 732025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722672-732025:1:exon

LOC107075642
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075642
product: uncharacterized LOC107075642, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001477158.1
SIO_010081: LOC107075642
subclass of: SO_0000673
so part of: LOC107075642
location: join(722672..722755,725649..725716,726075..726226,728046..728183,729996..732025)
location: region:722672-732025:1
so has part: feature:722672-722755:1:exon
so has part: feature:725649-725716:1:exon
so has part: feature:726075-726226:1:exon
so has part: feature:728046-728183:1:exon
so has part: feature:729996-732025:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:722672-722755:1:exon

position:722755:1
position: 722755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:725649-725716:1:exon

position:725649:1
position: 725649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725716:1
position: 725716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:726075-726226:1:exon

position:726075:1
position: 726075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726226:1
position: 726226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:728046-728183:1:exon

position:728046:1
position: 728046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728183:1
position: 728183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:729996-732025:1:exon

position:729996:1
position: 729996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107075642
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107075642
product: uncharacterized LOC107075642, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001477157.1
SIO_010081: LOC107075642
subclass of: SO_0000673
so part of: LOC107075642
location: join(722672..722755,725649..725716,726075..726226,728046..729603)
location: region:722672-729603:1
so has part: feature:722672-722755:1:exon
so has part: feature:725649-725716:1:exon
so has part: feature:726075-726226:1:exon
so has part: feature:728046-729603:1:exon

position:729603:1
position: 729603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722672-722755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725649-725716:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:726075-726226:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:728046-729603:1:exon

LOC107075641
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107075641
product: uncharacterized LOC107075641, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015337452.1
SIO_010081: LOC107075641
subclass of: SO_0000673
so part of: LOC107075641
location: complement(join(739391..739449,763467..763553,792546..792592,829922..830045,830754..830813,831179..831295))
location: region:739391-831295:-1
so has part: feature:831179-831295:-1:exon
so has part: feature:830754-830813:-1:exon
so has part: feature:829922-830045:-1:exon
so has part: feature:792546-792592:-1:exon
so has part: feature:763467-763553:-1:exon
so has part: feature:739391-739449:-1:exon

position:739391:-1
position: 739391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:831179-831295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:830754-830813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:829922-830045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792546-792592:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:763467-763553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739391-739449:-1:exon

position:739449:-1
position: 739449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107075641
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107075641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107075641 isoform X2
translation: MVAVSHVRNQIFTTMVTAGLMSTLNLHEMLEEALVVHFGCKKAQQSKLGVQPLKTCILASSTGESCEAQRKASPSEEWSPLLVSQSQTHWCICILLGVSWDSSGSVKIRAWAALTMDEKGGD
SIO_010081: LOC107075641
subclass of: SO_0000673
so part of: LOC107075641
location: complement(join(739429..739449,763467..763553,792546..792592,829922..830045,830754..830813,831179..831208))
location: region:739429-831208:-1
so has part: feature:831179-831208:-1:exon
so has part: feature:830754-830813:-1:exon
so has part: feature:829922-830045:-1:exon
so has part: feature:792546-792592:-1:exon
so has part: feature:763467-763553:-1:exon
so has part: feature:739429-739449:-1:exon

XP_015192938.1
type: Protein
SIO_000068: ncbiprotein

position:739429:-1
position: 739429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:831179-831208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:830754-830813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:829922-830045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792546-792592:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:763467-763553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739429-739449:-1:exon

LOC107075641
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107075641
product: uncharacterized LOC107075641, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015337453.1
SIO_010081: LOC107075641
subclass of: SO_0000673
so part of: LOC107075641
location: complement(join(762468..762686,763467..763553,792546..792592,829922..830045,830754..830813,831179..831295))
location: region:762468-831295:-1
so has part: feature:831179-831295:-1:exon
so has part: feature:830754-830813:-1:exon
so has part: feature:829922-830045:-1:exon
so has part: feature:792546-792592:-1:exon
so has part: feature:763467-763553:-1:exon
so has part: feature:762468-762686:-1:exon

position:762468:-1
position: 762468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:831179-831295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:830754-830813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:829922-830045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792546-792592:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:763467-763553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762468-762686:-1:exon

position:762686:-1
position: 762686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107075641
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107075641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107075641 isoform X3
translation: MVAVSHVRNQIFTTMVTAGLMSTLNLHEMLEEALVVHFGCKKAQQSKLGVQPLKTCILASSTGESCEAQRKASPSEEWSPLLVSQSQTHWCICILLGVSWDSSGSVKIRAWAALTMALT
SIO_010081: LOC107075641
subclass of: SO_0000673
so part of: LOC107075641
location: complement(join(762675..762686,763467..763553,792546..792592,829922..830045,830754..830813,831179..831208))
location: region:762675-831208:-1
so has part: feature:831179-831208:-1:exon
so has part: feature:830754-830813:-1:exon
so has part: feature:829922-830045:-1:exon
so has part: feature:792546-792592:-1:exon
so has part: feature:763467-763553:-1:exon
so has part: feature:762675-762686:-1:exon

XP_015192939.1
type: Protein
SIO_000068: ncbiprotein

position:762675:-1
position: 762675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:831179-831208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:830754-830813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:829922-830045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792546-792592:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:763467-763553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762675-762686:-1:exon

LOC107075641
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7918
gene: LOC107075641
product: uncharacterized LOC107075641, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001477156.1
SIO_010081: LOC107075641
so part of: LOC107075641
location: complement(join(824464..824795,826966..827921,829922..830045,830754..830813,831328..831415,832168..832198))
location: region:824464-832198:-1
so has part: feature:832168-832198:-1:exon
so has part: feature:831328-831415:-1:exon
so has part: feature:830754-830813:-1:exon
so has part: feature:829922-830045:-1:exon
so has part: feature:826966-827921:-1:exon
so has part: feature:824464-824795:-1:exon

position:824464:-1
position: 824464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:832168-832198:-1:exon

position:832168:-1
position: 832168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:831328-831415:-1:exon

position:831328:-1
position: 831328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831415:-1
position: 831415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:830754-830813:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:829922-830045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826966-827921:-1:exon

position:826966:-1
position: 826966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827921:-1
position: 827921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:824464-824795:-1:exon

position:824795:-1
position: 824795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ubash3b
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ubash3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(838733..879425)
location: region:838733-879425:-1
so has part: feature:838733-879425:-1:exon
subclass of: SO_0000010

102689563
type: Gene
SIO_000068: ncbigene

position:838733:-1
position: 838733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879425:-1
position: 879425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838733-879425:-1:exon

ubash3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ubash3b
product: ubiquitin associated and SH3 domain containing B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_006642149.2
SIO_010081: ubash3b
subclass of: SO_0000673
so part of: ubash3b
location: complement(join(838733..841756,841906..842015,842301..842407,842541..842685,842817..842909,843549..843671,844077..844197,844387..844522,845295..845503,845989..846158,846743..846941,847320..847506,847970..848023,878667..879425))
location: region:838733-879425:-1
so has part: feature:878667-879425:-1:exon
so has part: feature:847970-848023:-1:exon
so has part: feature:847320-847506:-1:exon
so has part: feature:846743-846941:-1:exon
so has part: feature:845989-846158:-1:exon
so has part: feature:845295-845503:-1:exon
so has part: feature:844387-844522:-1:exon
so has part: feature:844077-844197:-1:exon
so has part: feature:843549-843671:-1:exon
so has part: feature:842817-842909:-1:exon
so has part: feature:842541-842685:-1:exon
so has part: feature:842301-842407:-1:exon
so has part: feature:841906-842015:-1:exon
so has part: feature:838733-841756:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:878667-879425:-1:exon

position:878667:-1
position: 878667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:847970-848023:-1:exon

position:847970:-1
position: 847970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848023:-1
position: 848023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:847320-847506:-1:exon

position:847320:-1
position: 847320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847506:-1
position: 847506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:846743-846941:-1:exon

position:846743:-1
position: 846743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846941:-1
position: 846941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:845989-846158:-1:exon

position:845989:-1
position: 845989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846158:-1
position: 846158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:845295-845503:-1:exon

position:845295:-1
position: 845295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845503:-1
position: 845503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:844387-844522:-1:exon

position:844387:-1
position: 844387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844522:-1
position: 844522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:844077-844197:-1:exon

position:844077:-1
position: 844077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844197:-1
position: 844197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:843549-843671:-1:exon

position:843549:-1
position: 843549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843671:-1
position: 843671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:842817-842909:-1:exon

position:842817:-1
position: 842817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842909:-1
position: 842909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:842541-842685:-1:exon

position:842541:-1
position: 842541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842685:-1
position: 842685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:842301-842407:-1:exon

position:842301:-1
position: 842301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842407:-1
position: 842407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:841906-842015:-1:exon

position:841906:-1
position: 841906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842015:-1
position: 842015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:838733-841756:-1:exon

position:841756:-1
position: 841756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ubash3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ubash3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated and SH3 domain-containing protein B
translation: MAAKDDLYTKIVPRRQRQNRPGTVKHGSNLDVLLSMGFPKTRAQKALVSTGGRSVQAACDWLFSHVDDPFLDDPLPREYVLYLRPSGPLLHQLSHFWQQSRLTCGKNKAHNIFPHITLCQFFMCADSKVEALCEALQSTVCQWRGRFPCPLPLELYTSSNFIGLFVEEQCAEVLKKFAADFATEAASKADVRVEPHKKQLHVTLAYHFQTVHLPALEKLSKGIDVSLGCDWLAVLFSRDIRFANHETLRVMYPYAPQNEDELELVPGDFIFMSPVEQTSTSEGWVYGTSLSSGLSGLLPENYIMRADECDTWVFHGSHSFLNCTSPSGAAGVCDGLLDGRMLEEPGPGEPPTLSVICQPMQVLRVNSQSRMPKRCLFVCRHGERVDVVFGKHWLSQCFDAKGRYVRMNLNMPSGLPARIGGYRDYDKDAPITVFGTTQARLVGEALLESNTVIDFVYCSPSLRCVQTAHHILRGLQQEGKMKIRVEPGLFEWTKWVSGTSLPAWIPAADLAAASLSVDTAYRPHIPISKLSVSESYDTYISRSFQVTKEILSDCKGKGNNVLIVAHASSLEACTRQIQGLSPQNSKDFVQVVRKIPYLGFCACEEQGDTGVWQLVDPPILPLTHGPNHSFNWRETLLQE
SIO_010081: ubash3b
subclass of: SO_0000673
so part of: ubash3b
location: complement(join(841619..841756,841906..842015,842301..842407,842541..842685,842817..842909,843549..843671,844077..844197,844387..844522,845295..845503,845989..846158,846743..846941,847320..847506,847970..848023,878667..878794))
location: region:841619-878794:-1
so has part: feature:878667-878794:-1:exon
so has part: feature:847970-848023:-1:exon
so has part: feature:847320-847506:-1:exon
so has part: feature:846743-846941:-1:exon
so has part: feature:845989-846158:-1:exon
so has part: feature:845295-845503:-1:exon
so has part: feature:844387-844522:-1:exon
so has part: feature:844077-844197:-1:exon
so has part: feature:843549-843671:-1:exon
so has part: feature:842817-842909:-1:exon
so has part: feature:842541-842685:-1:exon
so has part: feature:842301-842407:-1:exon
so has part: feature:841906-842015:-1:exon
so has part: feature:841619-841756:-1:exon

XP_006642212.1
type: Protein
SIO_000068: ncbiprotein

position:841619:-1
position: 841619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878794:-1
position: 878794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:878667-878794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:847970-848023:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847320-847506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846743-846941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:845989-846158:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:845295-845503:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:844387-844522:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844077-844197:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:843549-843671:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:842817-842909:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:842541-842685:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:842301-842407:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:841906-842015:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:841619-841756:-1:exon

LOC102683076
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102683076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(882075..893574)
location: region:882075-893574:-1
so has part: feature:882075-893574:-1:exon
subclass of: SO_0000010

102683076
type: Gene
SIO_000068: ncbigene

position:882075:-1
position: 882075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893574:-1
position: 893574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882075-893574:-1:exon

LOC102683076
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102683076
product: uncharacterized LOC102683076
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015337361.1
SIO_010081: LOC102683076
subclass of: SO_0000673
so part of: LOC102683076
location: complement(join(882075..882430,882842..882913,883172..883507,884202..884361,884778..884846,885156..885235,885439..885544,888505..888596,888959..889036,889538..889694,889893..889981,890323..890394,890846..890999,891172..891216,891573..891706,893311..893574))
location: region:882075-893574:-1
so has part: feature:893311-893574:-1:exon
so has part: feature:891573-891706:-1:exon
so has part: feature:891172-891216:-1:exon
so has part: feature:890846-890999:-1:exon
so has part: feature:890323-890394:-1:exon
so has part: feature:889893-889981:-1:exon
so has part: feature:889538-889694:-1:exon
so has part: feature:888959-889036:-1:exon
so has part: feature:888505-888596:-1:exon
so has part: feature:885439-885544:-1:exon
so has part: feature:885156-885235:-1:exon
so has part: feature:884778-884846:-1:exon
so has part: feature:884202-884361:-1:exon
so has part: feature:883172-883507:-1:exon
so has part: feature:882842-882913:-1:exon
so has part: feature:882075-882430:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:893311-893574:-1:exon

position:893311:-1
position: 893311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:891573-891706:-1:exon

position:891573:-1
position: 891573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891706:-1
position: 891706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:891172-891216:-1:exon

position:891172:-1
position: 891172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891216:-1
position: 891216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:890846-890999:-1:exon

position:890846:-1
position: 890846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890999:-1
position: 890999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:890323-890394:-1:exon

position:890323:-1
position: 890323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890394:-1
position: 890394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:889893-889981:-1:exon

position:889893:-1
position: 889893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889981:-1
position: 889981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:889538-889694:-1:exon

position:889538:-1
position: 889538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889694:-1
position: 889694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:888959-889036:-1:exon

position:888959:-1
position: 888959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889036:-1
position: 889036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:888505-888596:-1:exon

position:888505:-1
position: 888505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888596:-1
position: 888596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:885439-885544:-1:exon

position:885439:-1
position: 885439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885544:-1
position: 885544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:885156-885235:-1:exon

position:885156:-1
position: 885156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885235:-1
position: 885235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:884778-884846:-1:exon

position:884778:-1
position: 884778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884846:-1
position: 884846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:884202-884361:-1:exon

position:884202:-1
position: 884202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884361:-1
position: 884361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:883172-883507:-1:exon

position:883172:-1
position: 883172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883507:-1
position: 883507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:882842-882913:-1:exon

position:882842:-1
position: 882842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882913:-1
position: 882913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:882075-882430:-1:exon

position:882430:-1
position: 882430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102683076
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102683076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102683076
translation: MICILLVAGHGTLLETQIKYTYLSLHCQNDGTGLYSHLAGVPKALLPGVGGKKILDFWWETVNMRQLFSEVYLVTNADKYKHYERWATANDFPVGNLVNDGSTTLEGRLGAVADLELAIRSRRLSDDIMVIAGDMLCADQNFDIAQVLRFFRSKGGELAIYYEMEEGEETTSRGIVEVCPVTHRITRFLEKPNAGLTGSRLASVVFYCLRRQTLPCLAQFLDLHPCAEDRMLGRLWEWLVNEEKLPVFGMKLPTGFQLIGQVGLADYTKWLAHYSAKQQESPGKPITSRSYARIGLMGNPSDGFNGKTIAMTIANFWAEVTLTESQTLVLVPHPLNDPTEFGSLQDLYCISRKEGYLGGLRLLQATCKKFYHFCSKQGIALSKQNFTLKYDTNIPRQVVSVHAECRQLGLRVPLALLQHAMEGCYNTRESVHIVLTYNRSLQLTVKAGMVQTGIPWGCSCQSVDISLLPLLNFAPPRFLFFGKIRSERGCRSHTDACVCSTSSCRRAQSWLGAIVSPLLSRRSVYTDECLGQGNLKMVELARQFGSAAKLPGSGGAVVGLCLDPHKLGELKRAFQEAGCVFCQVVPYDPSSSTVQDQG
SIO_010081: LOC102683076
subclass of: SO_0000673
so part of: LOC102683076
location: complement(join(882335..882430,882842..882913,883172..883507,884202..884361,884778..884846,885156..885235,885439..885544,888505..888596,888959..889036,889538..889694,889893..889981,890323..890394,890846..890999,891172..891216,891573..891706,893311..893367))
location: region:882335-893367:-1
so has part: feature:893311-893367:-1:exon
so has part: feature:891573-891706:-1:exon
so has part: feature:891172-891216:-1:exon
so has part: feature:890846-890999:-1:exon
so has part: feature:890323-890394:-1:exon
so has part: feature:889893-889981:-1:exon
so has part: feature:889538-889694:-1:exon
so has part: feature:888959-889036:-1:exon
so has part: feature:888505-888596:-1:exon
so has part: feature:885439-885544:-1:exon
so has part: feature:885156-885235:-1:exon
so has part: feature:884778-884846:-1:exon
so has part: feature:884202-884361:-1:exon
so has part: feature:883172-883507:-1:exon
so has part: feature:882842-882913:-1:exon
so has part: feature:882335-882430:-1:exon

XP_015192847.1
type: Protein
SIO_000068: ncbiprotein

position:882335:-1
position: 882335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893367:-1
position: 893367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893311-893367:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891573-891706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891172-891216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:890846-890999:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:890323-890394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889893-889981:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889538-889694:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:888959-889036:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888505-888596:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:885439-885544:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:885156-885235:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:884778-884846:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:884202-884361:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:883172-883507:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:882842-882913:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:882335-882430:-1:exon

LOC107075648
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107075648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(885835..887594)
location: region:885835-887594:-1
so has part: feature:885835-887594:-1:exon
subclass of: SO_0000010

107075648
type: Gene
SIO_000068: ncbigene

position:885835:-1
position: 885835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887594:-1
position: 887594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885835-887594:-1:exon

LOC107075648
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107075648
product: probable glucuronokinase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015337503.1
SIO_010081: LOC107075648
subclass of: SO_0000673
so part of: LOC107075648
location: complement(join(885835..886199,886689..886781,886877..887594))
location: region:885835-887594:-1
so has part: feature:886877-887594:-1:exon
so has part: feature:886689-886781:-1:exon
so has part: feature:885835-886199:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:886877-887594:-1:exon

position:886877:-1
position: 886877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:886689-886781:-1:exon

position:886689:-1
position: 886689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886781:-1
position: 886781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:885835-886199:-1:exon

position:886199:-1
position: 886199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107075648
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107075648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable glucuronokinase 2
translation: MKFYNITDGDLPRPVRANFILNVETEELFITAGLQDRVVQVYEGLVYMDFGKELMEGKGYGIQSSHWAVWLLSTQRCSQIKQACFSSVGYPDRSGSISFDFIFCHFHSRALCKHFPGTQC
SIO_010081: LOC107075648
subclass of: SO_0000673
so part of: LOC107075648
location: complement(join(885957..886199,886689..886781,886877..886903))
location: region:885957-886903:-1
so has part: feature:886877-886903:-1:exon
so has part: feature:886689-886781:-1:exon
so has part: feature:885957-886199:-1:exon

XP_015192989.1
type: Protein
SIO_000068: ncbiprotein

position:885957:-1
position: 885957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886903:-1
position: 886903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:886877-886903:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886689-886781:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:885957-886199:-1:exon

LOC102683281
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102683281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(894781..921237)
location: region:894781-921237:-1
so has part: feature:894781-921237:-1:exon
subclass of: SO_0000010

102683281
type: Gene
SIO_000068: ncbigene

position:894781:-1
position: 894781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921237:-1
position: 921237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:894781-921237:-1:exon

LOC102683281
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102683281
product: alpha-2-macroglobulin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015337550.1
SIO_010081: LOC102683281
subclass of: SO_0000673
so part of: LOC102683281
location: complement(join(894781..895134,895348..895392,895652..895757,896622..896690,896848..896938,897407..897531,897872..898087,898237..898427,898931..899093,899846..899920,900101..900257,900694..900775,901182..901358,901491..901574,902192..902243,902867..902988,903078..903204,904055..904280,905087..905204,905519..905630,907097..907246,908356..908502,909396..909541,910264..910327,911589..911807,912078..912248,912443..912552,913593..913707,913993..914110,915212..915296,915456..915624,916042..916062,917603..917655,918437..918593,919391..919571,921077..921237))
location: region:894781-921237:-1
so has part: feature:921077-921237:-1:exon
so has part: feature:919391-919571:-1:exon
so has part: feature:918437-918593:-1:exon
so has part: feature:917603-917655:-1:exon
so has part: feature:916042-916062:-1:exon
so has part: feature:915456-915624:-1:exon
so has part: feature:915212-915296:-1:exon
so has part: feature:913993-914110:-1:exon
so has part: feature:913593-913707:-1:exon
so has part: feature:912443-912552:-1:exon
so has part: feature:912078-912248:-1:exon
so has part: feature:911589-911807:-1:exon
so has part: feature:910264-910327:-1:exon
so has part: feature:909396-909541:-1:exon
so has part: feature:908356-908502:-1:exon
so has part: feature:907097-907246:-1:exon
so has part: feature:905519-905630:-1:exon
so has part: feature:905087-905204:-1:exon
so has part: feature:904055-904280:-1:exon
so has part: feature:903078-903204:-1:exon
so has part: feature:902867-902988:-1:exon
so has part: feature:902192-902243:-1:exon
so has part: feature:901491-901574:-1:exon
so has part: feature:901182-901358:-1:exon
so has part: feature:900694-900775:-1:exon
so has part: feature:900101-900257:-1:exon
so has part: feature:899846-899920:-1:exon
so has part: feature:898931-899093:-1:exon
so has part: feature:898237-898427:-1:exon
so has part: feature:897872-898087:-1:exon
so has part: feature:897407-897531:-1:exon
so has part: feature:896848-896938:-1:exon
so has part: feature:896622-896690:-1:exon
so has part: feature:895652-895757:-1:exon
so has part: feature:895348-895392:-1:exon
so has part: feature:894781-895134:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:921077-921237:-1:exon

position:921077:-1
position: 921077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:919391-919571:-1:exon

position:919391:-1
position: 919391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919571:-1
position: 919571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:918437-918593:-1:exon

position:918437:-1
position: 918437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918593:-1
position: 918593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:917603-917655:-1:exon

position:917603:-1
position: 917603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917655:-1
position: 917655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:916042-916062:-1:exon

position:916042:-1
position: 916042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916062:-1
position: 916062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:915456-915624:-1:exon

position:915456:-1
position: 915456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915624:-1
position: 915624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:915212-915296:-1:exon

position:915212:-1
position: 915212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915296:-1
position: 915296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:913993-914110:-1:exon

position:913993:-1
position: 913993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:914110:-1
position: 914110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:913593-913707:-1:exon

position:913593:-1
position: 913593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913707:-1
position: 913707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:912443-912552:-1:exon

position:912443:-1
position: 912443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912552:-1
position: 912552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:912078-912248:-1:exon

position:912078:-1
position: 912078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912248:-1
position: 912248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:911589-911807:-1:exon

position:911589:-1
position: 911589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911807:-1
position: 911807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:910264-910327:-1:exon

position:910264:-1
position: 910264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910327:-1
position: 910327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:909396-909541:-1:exon

position:909396:-1
position: 909396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909541:-1
position: 909541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:908356-908502:-1:exon

position:908356:-1
position: 908356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908502:-1
position: 908502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:907097-907246:-1:exon

position:907097:-1
position: 907097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:907246:-1
position: 907246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:905519-905630:-1:exon

position:905519:-1
position: 905519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905630:-1
position: 905630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:905087-905204:-1:exon

position:905087:-1
position: 905087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905204:-1
position: 905204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:904055-904280:-1:exon

position:904055:-1
position: 904055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904280:-1
position: 904280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:903078-903204:-1:exon

position:903078:-1
position: 903078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903204:-1
position: 903204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:902867-902988:-1:exon

position:902867:-1
position: 902867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902988:-1
position: 902988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:902192-902243:-1:exon

position:902192:-1
position: 902192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902243:-1
position: 902243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:901491-901574:-1:exon

position:901491:-1
position: 901491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901574:-1
position: 901574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:901182-901358:-1:exon

position:901182:-1
position: 901182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901358:-1
position: 901358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:900694-900775:-1:exon

position:900694:-1
position: 900694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900775:-1
position: 900775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:900101-900257:-1:exon

position:900101:-1
position: 900101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900257:-1
position: 900257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:899846-899920:-1:exon

position:899846:-1
position: 899846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899920:-1
position: 899920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:898931-899093:-1:exon

position:898931:-1
position: 898931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899093:-1
position: 899093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:898237-898427:-1:exon

position:898237:-1
position: 898237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898427:-1
position: 898427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:897872-898087:-1:exon

position:897872:-1
position: 897872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898087:-1
position: 898087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:897407-897531:-1:exon

position:897407:-1
position: 897407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897531:-1
position: 897531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:896848-896938:-1:exon

position:896848:-1
position: 896848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896938:-1
position: 896938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:896622-896690:-1:exon

position:896622:-1
position: 896622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896690:-1
position: 896690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:895652-895757:-1:exon

position:895652:-1
position: 895652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895757:-1
position: 895757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:895348-895392:-1:exon

position:895348:-1
position: 895348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895392:-1
position: 895392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:894781-895134:-1:exon

position:895134:-1
position: 895134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102683281
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102683281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-2-macroglobulin-like
translation: MWRGFSLACLLLCTCQASTPPLFMVTFPEMIIEGIESKLCATLLHPNETLRLSVSLVSGQDRRLLLEETTAQGFYRCEHFQGPLVPSDSMEVVEVQLQGESFTMEKRSEVHFRPSRSLIFIQTDKPIYKPGQTVHFRIVSLNENFVPVNDVYDVVELRDPARNRISQWLEQTSNGSILQLSLPLNPEARLGTYTLAVLEKGSTRVSQHFKVKEFVLPKFEVETHLPDSIFILDTEVTAKICGKYTYGKPVSGTAKLELCRKRSQYQHDVIDNVTICRTVIDETDKTGCFSYTFNVTEFMQNEGQLENRLRLYGELEEHGTGVVRRGGVDTRFTHLLGKVEFLDTAKHYEQGIPLQGKIRVVRHDSSPVANHRVYVTSERSWPHEILLNDTTDSQGIVHFSFNTSQWTRSTIWLEAKSSTSPQDLWAPGYEKGSHSVTRSDKPSSSFISIQKIDQTLQCGTQVAIRAQYSFFQKDIEADVGSIDFYYLVVSRGAISISGHMVEPLLAGSVKEGEVSFILPVSHELSPQAHVLVYAVLPNERVLAHSSDFQVEKCFRHKVSLKFASPQSVPGADTAVHLSAHPGSLCALKAIDRSVLLVEPEQELTAKIYDSQPIIAVTYNNPYYYDKPKDCLPVRVKKRSYIIHDLDSQRNAKTTFNHLRIRTITNMFLQKPDCLLFKGWTFYNQQYREYGWHGGRLLSPSIERLMMSPQPIPVVETVRTFFPETWLWDLVPVGESGSAQVPVTVPDTITTWEAGAFCLSPIGLGLAPSVRLTTFQPFFVELTLPYSIIRGERFELKATVFNYMSKCIMVKVSPAPSSDFTLEPCPGCEYSSCLCASQGKTFRWTLVASVLGAVNVSVSAEAVQTEMICDNEVVSVPEQGRIDTVIQTLLVEAEGTEKTISYNWLLCPKGSLVKEEVQLQLPEDIVEGSARASLSVLGDLLGRALQNLDRLLAMPYGCGEQNMVLFAPNIYILKYLESTGQLTQEIRNRATEFLKSGYQRQLNYMRFDGSYSAFGNSDDSGNTWLTAFVMKSFGGAQSYIYIDPNIISSTMNWLTRHQQPNGCFQSVGRLFNNRMKGGVSDEVTLTAYVSAAMLELNMSRTDQVLNSSLSCLRSATQNLTNIYTAALLFYTFTLARDEDTRAQLWTELETLASREGDTLHWPQSASEGSDSLSVEMSSYVLLALLSHPPLSASDLGRASKIVSWLTKQQNSYGGFSSTQDTVVALQALSLYGAEAFSKEVSSQVTAQSTEGDLHQFTVDSSNSLLYQERALRDVPGKYSVEVQGTGCMSIQVALHYNIPPPPDFSTFQIAAESQMTCDSGTRSRPLTAVVNVSYKGQRESTNMVIVNVKLLSGFVFDKDTLNELKGAPYVKRVDTEDGHVIVYLDGLHREKSQQYRFRMIQEHPVKGLKPAVVKIYDYYQTSEQATSEYTYPCPEEDHETNQI
SIO_010081: LOC102683281
subclass of: SO_0000673
so part of: LOC102683281
location: complement(join(895112..895134,895348..895392,895652..895757,896622..896690,896848..896938,897407..897531,897872..898087,898237..898427,898931..899093,899846..899920,900101..900257,900694..900775,901182..901358,901491..901574,902192..902243,902867..902988,903078..903204,904055..904280,905087..905204,905519..905630,907097..907246,908356..908502,909396..909541,910264..910327,911589..911807,912078..912248,912443..912552,913593..913707,913993..914110,915212..915296,915456..915624,916042..916062,917603..917655,918437..918593,919391..919571,921077..921138))
location: region:895112-921138:-1
so has part: feature:921077-921138:-1:exon
so has part: feature:919391-919571:-1:exon
so has part: feature:918437-918593:-1:exon
so has part: feature:917603-917655:-1:exon
so has part: feature:916042-916062:-1:exon
so has part: feature:915456-915624:-1:exon
so has part: feature:915212-915296:-1:exon
so has part: feature:913993-914110:-1:exon
so has part: feature:913593-913707:-1:exon
so has part: feature:912443-912552:-1:exon
so has part: feature:912078-912248:-1:exon
so has part: feature:911589-911807:-1:exon
so has part: feature:910264-910327:-1:exon
so has part: feature:909396-909541:-1:exon
so has part: feature:908356-908502:-1:exon
so has part: feature:907097-907246:-1:exon
so has part: feature:905519-905630:-1:exon
so has part: feature:905087-905204:-1:exon
so has part: feature:904055-904280:-1:exon
so has part: feature:903078-903204:-1:exon
so has part: feature:902867-902988:-1:exon
so has part: feature:902192-902243:-1:exon
so has part: feature:901491-901574:-1:exon
so has part: feature:901182-901358:-1:exon
so has part: feature:900694-900775:-1:exon
so has part: feature:900101-900257:-1:exon
so has part: feature:899846-899920:-1:exon
so has part: feature:898931-899093:-1:exon
so has part: feature:898237-898427:-1:exon
so has part: feature:897872-898087:-1:exon
so has part: feature:897407-897531:-1:exon
so has part: feature:896848-896938:-1:exon
so has part: feature:896622-896690:-1:exon
so has part: feature:895652-895757:-1:exon
so has part: feature:895348-895392:-1:exon
so has part: feature:895112-895134:-1:exon

XP_015193036.1
type: Protein
SIO_000068: ncbiprotein

position:895112:-1
position: 895112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921138:-1
position: 921138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921077-921138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:919391-919571:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918437-918593:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:917603-917655:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:916042-916062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:915456-915624:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:915212-915296:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:913993-914110:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:913593-913707:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912443-912552:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:912078-912248:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:911589-911807:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:910264-910327:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:909396-909541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:908356-908502:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:907097-907246:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:905519-905630:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:905087-905204:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:904055-904280:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:903078-903204:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:902867-902988:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:902192-902243:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:901491-901574:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:901182-901358:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:900694-900775:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:900101-900257:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:899846-899920:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:898931-899093:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:898237-898427:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:897872-898087:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:897407-897531:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:896848-896938:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:896622-896690:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:895652-895757:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:895348-895392:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:895112-895134:-1:exon

usp21
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: usp21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 957516..991762
location: region:957516-991762:1
so has part: feature:957516-991762:1:exon
subclass of: SO_0000010

102689760
type: Gene
SIO_000068: ncbigene

position:957516:1
position: 957516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991762:1
position: 991762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957516-991762:1:exon

usp21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: usp21
product: ubiquitin specific peptidase 21, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015337521.1
SIO_010081: usp21
subclass of: SO_0000673
so part of: usp21
location: join(957516..957842,959916..959999,961910..961988,966774..967484,984438..984488,985318..985441,985566..985677,986013..986123,986607..986671,986919..987022,987273..987353,987782..987860,988206..988313,988439..988559,988905..991762)
location: region:957516-991762:1
so has part: feature:957516-957842:1:exon
so has part: feature:959916-959999:1:exon
so has part: feature:961910-961988:1:exon
so has part: feature:966774-967484:1:exon
so has part: feature:984438-984488:1:exon
so has part: feature:985318-985441:1:exon
so has part: feature:985566-985677:1:exon
so has part: feature:986013-986123:1:exon
so has part: feature:986607-986671:1:exon
so has part: feature:986919-987022:1:exon
so has part: feature:987273-987353:1:exon
so has part: feature:987782-987860:1:exon
so has part: feature:988206-988313:1:exon
so has part: feature:988439-988559:1:exon
so has part: feature:988905-991762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:957516-957842:1:exon

position:957842:1
position: 957842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:959916-959999:1:exon

position:959916:1
position: 959916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959999:1
position: 959999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:961910-961988:1:exon

position:961910:1
position: 961910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961988:1
position: 961988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:966774-967484:1:exon

position:966774:1
position: 966774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967484:1
position: 967484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:984438-984488:1:exon

position:984438:1
position: 984438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984488:1
position: 984488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:985318-985441:1:exon

position:985318:1
position: 985318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985441:1
position: 985441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:985566-985677:1:exon

position:985566:1
position: 985566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985677:1
position: 985677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:986013-986123:1:exon

position:986013:1
position: 986013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986123:1
position: 986123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:986607-986671:1:exon

position:986607:1
position: 986607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986671:1
position: 986671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:986919-987022:1:exon

position:986919:1
position: 986919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987022:1
position: 987022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:987273-987353:1:exon

position:987273:1
position: 987273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987353:1
position: 987353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:987782-987860:1:exon

position:987782:1
position: 987782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987860:1
position: 987860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:988206-988313:1:exon

position:988206:1
position: 988206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988313:1
position: 988313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:988439-988559:1:exon

position:988439:1
position: 988439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988559:1
position: 988559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:988905-991762:1:exon

position:988905:1
position: 988905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

usp21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: usp21
product: ubiquitin specific peptidase 21, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015337520.1
SIO_010081: usp21
subclass of: SO_0000673
so part of: usp21
location: join(957516..957842,961910..962161,966304..966620,966774..967484,984438..984488,985318..985441,985566..985677,986013..986123,986607..986671,986919..987022,987273..987353,987782..987860,988206..988313,988439..988559,988905..991762)
location: region:957516-991762:1
so has part: feature:957516-957842:1:exon
so has part: feature:961910-962161:1:exon
so has part: feature:966304-966620:1:exon
so has part: feature:966774-967484:1:exon
so has part: feature:984438-984488:1:exon
so has part: feature:985318-985441:1:exon
so has part: feature:985566-985677:1:exon
so has part: feature:986013-986123:1:exon
so has part: feature:986607-986671:1:exon
so has part: feature:986919-987022:1:exon
so has part: feature:987273-987353:1:exon
so has part: feature:987782-987860:1:exon
so has part: feature:988206-988313:1:exon
so has part: feature:988439-988559:1:exon
so has part: feature:988905-991762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:957516-957842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961910-962161:1:exon

position:962161:1
position: 962161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:966304-966620:1:exon

position:966304:1
position: 966304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966620:1
position: 966620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:966774-967484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:984438-984488:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:985318-985441:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:985566-985677:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:986013-986123:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986607-986671:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986919-987022:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:987273-987353:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:987782-987860:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:988206-988313:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:988439-988559:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:988905-991762:1:exon

usp21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: usp21
product: ubiquitin specific peptidase 21, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015337518.1
SIO_010081: usp21
subclass of: SO_0000673
so part of: usp21
location: join(957516..957842,961910..962161,966774..967484,984438..984488,985318..985441,985566..985677,986013..986123,986607..986671,986919..987022,987273..987353,987782..987860,988206..988313,988439..988559,988905..991762)
location: region:957516-991762:1
so has part: feature:957516-957842:1:exon
so has part: feature:961910-962161:1:exon
so has part: feature:966774-967484:1:exon
so has part: feature:984438-984488:1:exon
so has part: feature:985318-985441:1:exon
so has part: feature:985566-985677:1:exon
so has part: feature:986013-986123:1:exon
so has part: feature:986607-986671:1:exon
so has part: feature:986919-987022:1:exon
so has part: feature:987273-987353:1:exon
so has part: feature:987782-987860:1:exon
so has part: feature:988206-988313:1:exon
so has part: feature:988439-988559:1:exon
so has part: feature:988905-991762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:957516-957842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961910-962161:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:966774-967484:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:984438-984488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:985318-985441:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:985566-985677:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986013-986123:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:986607-986671:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986919-987022:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987273-987353:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:987782-987860:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988206-988313:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:988439-988559:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:988905-991762:1:exon

usp21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: usp21
product: ubiquitin specific peptidase 21, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_015337522.1
SIO_010081: usp21
subclass of: SO_0000673
so part of: usp21
location: join(957516..957842,961910..961988,962068..962161,966774..967484,984438..984488,985318..985441,985566..985677,986013..986123,986607..986671,986919..987022,987273..987353,987782..987860,988206..988313,988439..988559,988905..991762)
location: region:957516-991762:1
so has part: feature:957516-957842:1:exon
so has part: feature:961910-961988:1:exon
so has part: feature:962068-962161:1:exon
so has part: feature:966774-967484:1:exon
so has part: feature:984438-984488:1:exon
so has part: feature:985318-985441:1:exon
so has part: feature:985566-985677:1:exon
so has part: feature:986013-986123:1:exon
so has part: feature:986607-986671:1:exon
so has part: feature:986919-987022:1:exon
so has part: feature:987273-987353:1:exon
so has part: feature:987782-987860:1:exon
so has part: feature:988206-988313:1:exon
so has part: feature:988439-988559:1:exon
so has part: feature:988905-991762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:957516-957842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961910-961988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962068-962161:1:exon

position:962068:1
position: 962068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:966774-967484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:984438-984488:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:985318-985441:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:985566-985677:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:986013-986123:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986607-986671:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986919-987022:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:987273-987353:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:987782-987860:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:988206-988313:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:988439-988559:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:988905-991762:1:exon

usp21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: usp21
product: ubiquitin specific peptidase 21, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_015337517.1
SIO_010081: usp21
subclass of: SO_0000673
so part of: usp21
location: join(957516..957842,961910..961988,966774..967484,984438..984488,985318..985441,985566..985677,986013..986123,986607..986671,986919..987022,987273..987353,987782..987860,988206..988313,988439..988559,988905..991762)
location: region:957516-991762:1
so has part: feature:957516-957842:1:exon
so has part: feature:961910-961988:1:exon
so has part: feature:966774-967484:1:exon
so has part: feature:984438-984488:1:exon
so has part: feature:985318-985441:1:exon
so has part: feature:985566-985677:1:exon
so has part: feature:986013-986123:1:exon
so has part: feature:986607-986671:1:exon
so has part: feature:986919-987022:1:exon
so has part: feature:987273-987353:1:exon
so has part: feature:987782-987860:1:exon
so has part: feature:988206-988313:1:exon
so has part: feature:988439-988559:1:exon
so has part: feature:988905-991762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:957516-957842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961910-961988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:966774-967484:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:984438-984488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:985318-985441:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:985566-985677:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986013-986123:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:986607-986671:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986919-987022:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987273-987353:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:987782-987860:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988206-988313:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:988439-988559:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:988905-991762:1:exon

usp21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: usp21
product: ubiquitin specific peptidase 21, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_006642150.2
SIO_010081: usp21
subclass of: SO_0000673
so part of: usp21
location: join(957516..957842,966774..967484,984438..984488,985318..985441,985566..985677,986013..986123,986607..986671,986919..987022,987273..987353,987782..987860,988206..988313,988439..988559,988905..991762)
location: region:957516-991762:1
so has part: feature:957516-957842:1:exon
so has part: feature:966774-967484:1:exon
so has part: feature:984438-984488:1:exon
so has part: feature:985318-985441:1:exon
so has part: feature:985566-985677:1:exon
so has part: feature:986013-986123:1:exon
so has part: feature:986607-986671:1:exon
so has part: feature:986919-987022:1:exon
so has part: feature:987273-987353:1:exon
so has part: feature:987782-987860:1:exon
so has part: feature:988206-988313:1:exon
so has part: feature:988439-988559:1:exon
so has part: feature:988905-991762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:957516-957842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:966774-967484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:984438-984488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:985318-985441:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:985566-985677:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986013-986123:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986607-986671:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:986919-987022:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987273-987353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987782-987860:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:988206-988313:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988439-988559:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:988905-991762:1:exon

usp21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: usp21
product: ubiquitin specific peptidase 21, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015337519.1
SIO_010081: usp21
subclass of: SO_0000673
so part of: usp21
location: join(959814..959999,961910..961988,966774..967484,984438..984488,985318..985441,985566..985677,986013..986123,986607..986671,986919..987022,987273..987353,987782..987860,988206..988313,988439..988559,988905..991762)
location: region:959814-991762:1
so has part: feature:959814-959999:1:exon
so has part: feature:961910-961988:1:exon
so has part: feature:966774-967484:1:exon
so has part: feature:984438-984488:1:exon
so has part: feature:985318-985441:1:exon
so has part: feature:985566-985677:1:exon
so has part: feature:986013-986123:1:exon
so has part: feature:986607-986671:1:exon
so has part: feature:986919-987022:1:exon
so has part: feature:987273-987353:1:exon
so has part: feature:987782-987860:1:exon
so has part: feature:988206-988313:1:exon
so has part: feature:988439-988559:1:exon
so has part: feature:988905-991762:1:exon

position:959814:1
position: 959814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959814-959999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961910-961988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:966774-967484:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:984438-984488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:985318-985441:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:985566-985677:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986013-986123:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:986607-986671:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986919-987022:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987273-987353:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:987782-987860:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988206-988313:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:988439-988559:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:988905-991762:1:exon

usp21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: usp21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 21 isoform X1
translation: MRSATASLRLRSSMSRASSTAKRYTSTYTSHYGSYSSSLASGLGSYGERDKLSYKSPSSSYTPSSYLSMGASRARNHSTSSEPDRGRPVPRADILGSRRSESLSRTPGKGYSSGLSGGGGYAGYSYSPTQPSYLPTSPSSSSRLGLSRRKSISQTDLTRDLASLGLSDSSSRARLDADVLKGSYRSRGGEISDYSSSRYSYGVSHSSTQEGLSTSLRSSSSSWDRGRTGSPVREPTNSKSAQGLVGLRNLGNTCFMNSILQCLSNTQQLRDYCLHNSHRRDLNNNSRTNTALMEEFAKLIQTLWTSTSSEAVSPSEFKTQIQKYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPRATMEDLDHLPDDEKGKRMWNKYLEREDSRIVDLFVGQLKSSLTCSDCGYCSTVFDPFWDLSLPIAKKGYGEVSLMDCMRLFTKEDVLDGDEKPTCYRCKARRKCTKKFTIQKFPKILVLHLKRFSEARVRTSKLSTFVSFPLKDLDLREFASENSIHAVYNLYAVSNHSGTTMGGHYTAYCRNPSTGEWHTFNDSRVTPMSSGQVRTSDAYVLFYELSTSSRM
SIO_010081: usp21
subclass of: SO_0000673
so part of: usp21
location: join(966777..967484,984438..984488,985318..985441,985566..985677,986013..986123,986607..986671,986919..987022,987273..987353,987782..987860,988206..988313,988439..988559,988905..988989)
location: region:966777-988989:1
so has part: feature:966777-967484:1:exon
so has part: feature:984438-984488:1:exon
so has part: feature:985318-985441:1:exon
so has part: feature:985566-985677:1:exon
so has part: feature:986013-986123:1:exon
so has part: feature:986607-986671:1:exon
so has part: feature:986919-987022:1:exon
so has part: feature:987273-987353:1:exon
so has part: feature:987782-987860:1:exon
so has part: feature:988206-988313:1:exon
so has part: feature:988439-988559:1:exon
so has part: feature:988905-988989:1:exon

XP_015193003.1
type: Protein
SIO_000068: ncbiprotein

position:966777:1
position: 966777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988989:1
position: 988989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:966777-967484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:984438-984488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985318-985441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:985566-985677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986013-986123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986607-986671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986919-987022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987273-987353:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987782-987860:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:988206-988313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:988439-988559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988905-988989:1:exon

usp21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: usp21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 21 isoform X1
translation: MRSATASLRLRSSMSRASSTAKRYTSTYTSHYGSYSSSLASGLGSYGERDKLSYKSPSSSYTPSSYLSMGASRARNHSTSSEPDRGRPVPRADILGSRRSESLSRTPGKGYSSGLSGGGGYAGYSYSPTQPSYLPTSPSSSSRLGLSRRKSISQTDLTRDLASLGLSDSSSRARLDADVLKGSYRSRGGEISDYSSSRYSYGVSHSSTQEGLSTSLRSSSSSWDRGRTGSPVREPTNSKSAQGLVGLRNLGNTCFMNSILQCLSNTQQLRDYCLHNSHRRDLNNNSRTNTALMEEFAKLIQTLWTSTSSEAVSPSEFKTQIQKYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPRATMEDLDHLPDDEKGKRMWNKYLEREDSRIVDLFVGQLKSSLTCSDCGYCSTVFDPFWDLSLPIAKKGYGEVSLMDCMRLFTKEDVLDGDEKPTCYRCKARRKCTKKFTIQKFPKILVLHLKRFSEARVRTSKLSTFVSFPLKDLDLREFASENSIHAVYNLYAVSNHSGTTMGGHYTAYCRNPSTGEWHTFNDSRVTPMSSGQVRTSDAYVLFYELSTSSRM
SIO_010081: usp21
subclass of: SO_0000673
so part of: usp21
location: join(966777..967484,984438..984488,985318..985441,985566..985677,986013..986123,986607..986671,986919..987022,987273..987353,987782..987860,988206..988313,988439..988559,988905..988989)
location: region:966777-988989:1
so has part: feature:966777-967484:1:exon
so has part: feature:984438-984488:1:exon
so has part: feature:985318-985441:1:exon
so has part: feature:985566-985677:1:exon
so has part: feature:986013-986123:1:exon
so has part: feature:986607-986671:1:exon
so has part: feature:986919-987022:1:exon
so has part: feature:987273-987353:1:exon
so has part: feature:987782-987860:1:exon
so has part: feature:988206-988313:1:exon
so has part: feature:988439-988559:1:exon
so has part: feature:988905-988989:1:exon

XP_015193004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:966777-967484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:984438-984488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985318-985441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:985566-985677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986013-986123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986607-986671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986919-987022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987273-987353:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987782-987860:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:988206-988313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:988439-988559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988905-988989:1:exon

usp21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: usp21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 21 isoform X1
translation: MRSATASLRLRSSMSRASSTAKRYTSTYTSHYGSYSSSLASGLGSYGERDKLSYKSPSSSYTPSSYLSMGASRARNHSTSSEPDRGRPVPRADILGSRRSESLSRTPGKGYSSGLSGGGGYAGYSYSPTQPSYLPTSPSSSSRLGLSRRKSISQTDLTRDLASLGLSDSSSRARLDADVLKGSYRSRGGEISDYSSSRYSYGVSHSSTQEGLSTSLRSSSSSWDRGRTGSPVREPTNSKSAQGLVGLRNLGNTCFMNSILQCLSNTQQLRDYCLHNSHRRDLNNNSRTNTALMEEFAKLIQTLWTSTSSEAVSPSEFKTQIQKYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPRATMEDLDHLPDDEKGKRMWNKYLEREDSRIVDLFVGQLKSSLTCSDCGYCSTVFDPFWDLSLPIAKKGYGEVSLMDCMRLFTKEDVLDGDEKPTCYRCKARRKCTKKFTIQKFPKILVLHLKRFSEARVRTSKLSTFVSFPLKDLDLREFASENSIHAVYNLYAVSNHSGTTMGGHYTAYCRNPSTGEWHTFNDSRVTPMSSGQVRTSDAYVLFYELSTSSRM
SIO_010081: usp21
subclass of: SO_0000673
so part of: usp21
location: join(966777..967484,984438..984488,985318..985441,985566..985677,986013..986123,986607..986671,986919..987022,987273..987353,987782..987860,988206..988313,988439..988559,988905..988989)
location: region:966777-988989:1
so has part: feature:966777-967484:1:exon
so has part: feature:984438-984488:1:exon
so has part: feature:985318-985441:1:exon
so has part: feature:985566-985677:1:exon
so has part: feature:986013-986123:1:exon
so has part: feature:986607-986671:1:exon
so has part: feature:986919-987022:1:exon
so has part: feature:987273-987353:1:exon
so has part: feature:987782-987860:1:exon
so has part: feature:988206-988313:1:exon
so has part: feature:988439-988559:1:exon
so has part: feature:988905-988989:1:exon

XP_015193005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:966777-967484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:984438-984488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985318-985441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:985566-985677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986013-986123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986607-986671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986919-987022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987273-987353:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987782-987860:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:988206-988313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:988439-988559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988905-988989:1:exon

usp21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: usp21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 21 isoform X1
translation: MRSATASLRLRSSMSRASSTAKRYTSTYTSHYGSYSSSLASGLGSYGERDKLSYKSPSSSYTPSSYLSMGASRARNHSTSSEPDRGRPVPRADILGSRRSESLSRTPGKGYSSGLSGGGGYAGYSYSPTQPSYLPTSPSSSSRLGLSRRKSISQTDLTRDLASLGLSDSSSRARLDADVLKGSYRSRGGEISDYSSSRYSYGVSHSSTQEGLSTSLRSSSSSWDRGRTGSPVREPTNSKSAQGLVGLRNLGNTCFMNSILQCLSNTQQLRDYCLHNSHRRDLNNNSRTNTALMEEFAKLIQTLWTSTSSEAVSPSEFKTQIQKYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPRATMEDLDHLPDDEKGKRMWNKYLEREDSRIVDLFVGQLKSSLTCSDCGYCSTVFDPFWDLSLPIAKKGYGEVSLMDCMRLFTKEDVLDGDEKPTCYRCKARRKCTKKFTIQKFPKILVLHLKRFSEARVRTSKLSTFVSFPLKDLDLREFASENSIHAVYNLYAVSNHSGTTMGGHYTAYCRNPSTGEWHTFNDSRVTPMSSGQVRTSDAYVLFYELSTSSRM
SIO_010081: usp21
subclass of: SO_0000673
so part of: usp21
location: join(966777..967484,984438..984488,985318..985441,985566..985677,986013..986123,986607..986671,986919..987022,987273..987353,987782..987860,988206..988313,988439..988559,988905..988989)
location: region:966777-988989:1
so has part: feature:966777-967484:1:exon
so has part: feature:984438-984488:1:exon
so has part: feature:985318-985441:1:exon
so has part: feature:985566-985677:1:exon
so has part: feature:986013-986123:1:exon
so has part: feature:986607-986671:1:exon
so has part: feature:986919-987022:1:exon
so has part: feature:987273-987353:1:exon
so has part: feature:987782-987860:1:exon
so has part: feature:988206-988313:1:exon
so has part: feature:988439-988559:1:exon
so has part: feature:988905-988989:1:exon

XP_015193006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:966777-967484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:984438-984488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985318-985441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:985566-985677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986013-986123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986607-986671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986919-987022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987273-987353:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987782-987860:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:988206-988313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:988439-988559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988905-988989:1:exon

usp21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: usp21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 21 isoform X1
translation: MRSATASLRLRSSMSRASSTAKRYTSTYTSHYGSYSSSLASGLGSYGERDKLSYKSPSSSYTPSSYLSMGASRARNHSTSSEPDRGRPVPRADILGSRRSESLSRTPGKGYSSGLSGGGGYAGYSYSPTQPSYLPTSPSSSSRLGLSRRKSISQTDLTRDLASLGLSDSSSRARLDADVLKGSYRSRGGEISDYSSSRYSYGVSHSSTQEGLSTSLRSSSSSWDRGRTGSPVREPTNSKSAQGLVGLRNLGNTCFMNSILQCLSNTQQLRDYCLHNSHRRDLNNNSRTNTALMEEFAKLIQTLWTSTSSEAVSPSEFKTQIQKYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPRATMEDLDHLPDDEKGKRMWNKYLEREDSRIVDLFVGQLKSSLTCSDCGYCSTVFDPFWDLSLPIAKKGYGEVSLMDCMRLFTKEDVLDGDEKPTCYRCKARRKCTKKFTIQKFPKILVLHLKRFSEARVRTSKLSTFVSFPLKDLDLREFASENSIHAVYNLYAVSNHSGTTMGGHYTAYCRNPSTGEWHTFNDSRVTPMSSGQVRTSDAYVLFYELSTSSRM
SIO_010081: usp21
subclass of: SO_0000673
so part of: usp21
location: join(966777..967484,984438..984488,985318..985441,985566..985677,986013..986123,986607..986671,986919..987022,987273..987353,987782..987860,988206..988313,988439..988559,988905..988989)
location: region:966777-988989:1
so has part: feature:966777-967484:1:exon
so has part: feature:984438-984488:1:exon
so has part: feature:985318-985441:1:exon
so has part: feature:985566-985677:1:exon
so has part: feature:986013-986123:1:exon
so has part: feature:986607-986671:1:exon
so has part: feature:986919-987022:1:exon
so has part: feature:987273-987353:1:exon
so has part: feature:987782-987860:1:exon
so has part: feature:988206-988313:1:exon
so has part: feature:988439-988559:1:exon
so has part: feature:988905-988989:1:exon

XP_015193007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:966777-967484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:984438-984488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985318-985441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:985566-985677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986013-986123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986607-986671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986919-987022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987273-987353:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987782-987860:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:988206-988313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:988439-988559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988905-988989:1:exon

usp21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: usp21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 21 isoform X1
translation: MRSATASLRLRSSMSRASSTAKRYTSTYTSHYGSYSSSLASGLGSYGERDKLSYKSPSSSYTPSSYLSMGASRARNHSTSSEPDRGRPVPRADILGSRRSESLSRTPGKGYSSGLSGGGGYAGYSYSPTQPSYLPTSPSSSSRLGLSRRKSISQTDLTRDLASLGLSDSSSRARLDADVLKGSYRSRGGEISDYSSSRYSYGVSHSSTQEGLSTSLRSSSSSWDRGRTGSPVREPTNSKSAQGLVGLRNLGNTCFMNSILQCLSNTQQLRDYCLHNSHRRDLNNNSRTNTALMEEFAKLIQTLWTSTSSEAVSPSEFKTQIQKYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPRATMEDLDHLPDDEKGKRMWNKYLEREDSRIVDLFVGQLKSSLTCSDCGYCSTVFDPFWDLSLPIAKKGYGEVSLMDCMRLFTKEDVLDGDEKPTCYRCKARRKCTKKFTIQKFPKILVLHLKRFSEARVRTSKLSTFVSFPLKDLDLREFASENSIHAVYNLYAVSNHSGTTMGGHYTAYCRNPSTGEWHTFNDSRVTPMSSGQVRTSDAYVLFYELSTSSRM
SIO_010081: usp21
subclass of: SO_0000673
so part of: usp21
location: join(966777..967484,984438..984488,985318..985441,985566..985677,986013..986123,986607..986671,986919..987022,987273..987353,987782..987860,988206..988313,988439..988559,988905..988989)
location: region:966777-988989:1
so has part: feature:966777-967484:1:exon
so has part: feature:984438-984488:1:exon
so has part: feature:985318-985441:1:exon
so has part: feature:985566-985677:1:exon
so has part: feature:986013-986123:1:exon
so has part: feature:986607-986671:1:exon
so has part: feature:986919-987022:1:exon
so has part: feature:987273-987353:1:exon
so has part: feature:987782-987860:1:exon
so has part: feature:988206-988313:1:exon
so has part: feature:988439-988559:1:exon
so has part: feature:988905-988989:1:exon

XP_015193008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:966777-967484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:984438-984488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985318-985441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:985566-985677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986013-986123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986607-986671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986919-987022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987273-987353:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987782-987860:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:988206-988313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:988439-988559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988905-988989:1:exon

usp21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: usp21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 21 isoform X1
translation: MRSATASLRLRSSMSRASSTAKRYTSTYTSHYGSYSSSLASGLGSYGERDKLSYKSPSSSYTPSSYLSMGASRARNHSTSSEPDRGRPVPRADILGSRRSESLSRTPGKGYSSGLSGGGGYAGYSYSPTQPSYLPTSPSSSSRLGLSRRKSISQTDLTRDLASLGLSDSSSRARLDADVLKGSYRSRGGEISDYSSSRYSYGVSHSSTQEGLSTSLRSSSSSWDRGRTGSPVREPTNSKSAQGLVGLRNLGNTCFMNSILQCLSNTQQLRDYCLHNSHRRDLNNNSRTNTALMEEFAKLIQTLWTSTSSEAVSPSEFKTQIQKYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPRATMEDLDHLPDDEKGKRMWNKYLEREDSRIVDLFVGQLKSSLTCSDCGYCSTVFDPFWDLSLPIAKKGYGEVSLMDCMRLFTKEDVLDGDEKPTCYRCKARRKCTKKFTIQKFPKILVLHLKRFSEARVRTSKLSTFVSFPLKDLDLREFASENSIHAVYNLYAVSNHSGTTMGGHYTAYCRNPSTGEWHTFNDSRVTPMSSGQVRTSDAYVLFYELSTSSRM
SIO_010081: usp21
subclass of: SO_0000673
so part of: usp21
location: join(966777..967484,984438..984488,985318..985441,985566..985677,986013..986123,986607..986671,986919..987022,987273..987353,987782..987860,988206..988313,988439..988559,988905..988989)
location: region:966777-988989:1
so has part: feature:966777-967484:1:exon
so has part: feature:984438-984488:1:exon
so has part: feature:985318-985441:1:exon
so has part: feature:985566-985677:1:exon
so has part: feature:986013-986123:1:exon
so has part: feature:986607-986671:1:exon
so has part: feature:986919-987022:1:exon
so has part: feature:987273-987353:1:exon
so has part: feature:987782-987860:1:exon
so has part: feature:988206-988313:1:exon
so has part: feature:988439-988559:1:exon
so has part: feature:988905-988989:1:exon

XP_006642213.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:966777-967484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:984438-984488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985318-985441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:985566-985677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986013-986123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986607-986671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986919-987022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987273-987353:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987782-987860:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:988206-988313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:988439-988559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988905-988989:1:exon

usp21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: usp21
product: ubiquitin specific peptidase 21, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_006642151.2
SIO_010081: usp21
subclass of: SO_0000673
so part of: usp21
location: join(975910..976625,984438..984488,985318..985441,985566..985677,986013..986123,986607..986671,986919..987022,987273..987353,987782..987860,988206..988313,988439..988559,988905..991762)
location: region:975910-991762:1
so has part: feature:975910-976625:1:exon
so has part: feature:984438-984488:1:exon
so has part: feature:985318-985441:1:exon
so has part: feature:985566-985677:1:exon
so has part: feature:986013-986123:1:exon
so has part: feature:986607-986671:1:exon
so has part: feature:986919-987022:1:exon
so has part: feature:987273-987353:1:exon
so has part: feature:987782-987860:1:exon
so has part: feature:988206-988313:1:exon
so has part: feature:988439-988559:1:exon
so has part: feature:988905-991762:1:exon

position:975910:1
position: 975910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:975910-976625:1:exon

position:976625:1
position: 976625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:984438-984488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985318-985441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:985566-985677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986013-986123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986607-986671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986919-987022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987273-987353:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987782-987860:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:988206-988313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:988439-988559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988905-991762:1:exon

usp21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: usp21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 21 isoform X3
translation: MPTIRQSYTVTVPEEPPASAFPFLKQEIRRKSSAVSGSVLVSAFVGLLINQAKNSKSAQGLVGLRNLGNTCFMNSILQCLSNTQQLRDYCLHNSHRRDLNNNSRTNTALMEEFAKLIQTLWTSTSSEAVSPSEFKTQIQKYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPRATMEDLDHLPDDEKGKRMWNKYLEREDSRIVDLFVGQLKSSLTCSDCGYCSTVFDPFWDLSLPIAKKGYGEVSLMDCMRLFTKEDVLDGDEKPTCYRCKARRKCTKKFTIQKFPKILVLHLKRFSEARVRTSKLSTFVSFPLKDLDLREFASENSIHAVYNLYAVSNHSGTTMGGHYTAYCRNPSTGEWHTFNDSRVTPMSSGQVRTSDAYVLFYELSTSSRM
SIO_010081: usp21
subclass of: SO_0000673
so part of: usp21
location: join(976467..976625,984438..984488,985318..985441,985566..985677,986013..986123,986607..986671,986919..987022,987273..987353,987782..987860,988206..988313,988439..988559,988905..988989)
location: region:976467-988989:1
so has part: feature:976467-976625:1:exon
so has part: feature:984438-984488:1:exon
so has part: feature:985318-985441:1:exon
so has part: feature:985566-985677:1:exon
so has part: feature:986013-986123:1:exon
so has part: feature:986607-986671:1:exon
so has part: feature:986919-987022:1:exon
so has part: feature:987273-987353:1:exon
so has part: feature:987782-987860:1:exon
so has part: feature:988206-988313:1:exon
so has part: feature:988439-988559:1:exon
so has part: feature:988905-988989:1:exon

XP_006642214.1
type: Protein
SIO_000068: ncbiprotein

position:976467:1
position: 976467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976467-976625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:984438-984488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985318-985441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:985566-985677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986013-986123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986607-986671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986919-987022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987273-987353:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987782-987860:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:988206-988313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:988439-988559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988905-988989:1:exon

usp21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: usp21
product: ubiquitin specific peptidase 21, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015337523.1
SIO_010081: usp21
subclass of: SO_0000673
so part of: usp21
location: join(982166..982441,984438..984488,985318..985441,985566..985677,986013..986123,986607..986671,986919..987022,987273..987353,987782..987860,988206..988313,988439..988559,988905..991762)
location: region:982166-991762:1
so has part: feature:982166-982441:1:exon
so has part: feature:984438-984488:1:exon
so has part: feature:985318-985441:1:exon
so has part: feature:985566-985677:1:exon
so has part: feature:986013-986123:1:exon
so has part: feature:986607-986671:1:exon
so has part: feature:986919-987022:1:exon
so has part: feature:987273-987353:1:exon
so has part: feature:987782-987860:1:exon
so has part: feature:988206-988313:1:exon
so has part: feature:988439-988559:1:exon
so has part: feature:988905-991762:1:exon

position:982166:1
position: 982166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982166-982441:1:exon

position:982441:1
position: 982441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:984438-984488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985318-985441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:985566-985677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986013-986123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986607-986671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986919-987022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987273-987353:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987782-987860:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:988206-988313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:988439-988559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988905-991762:1:exon

usp21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: usp21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 21 isoform X2
translation: MQRSAEIQTVHLGEKDWDVGKLEARGHAPASVPVQINSTPQGLLQQRGSDSQSALQRRNSKSAQGLVGLRNLGNTCFMNSILQCLSNTQQLRDYCLHNSHRRDLNNNSRTNTALMEEFAKLIQTLWTSTSSEAVSPSEFKTQIQKYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPRATMEDLDHLPDDEKGKRMWNKYLEREDSRIVDLFVGQLKSSLTCSDCGYCSTVFDPFWDLSLPIAKKGYGEVSLMDCMRLFTKEDVLDGDEKPTCYRCKARRKCTKKFTIQKFPKILVLHLKRFSEARVRTSKLSTFVSFPLKDLDLREFASENSIHAVYNLYAVSNHSGTTMGGHYTAYCRNPSTGEWHTFNDSRVTPMSSGQVRTSDAYVLFYELSTSSRM
SIO_010081: usp21
subclass of: SO_0000673
so part of: usp21
location: join(982268..982441,984438..984488,985318..985441,985566..985677,986013..986123,986607..986671,986919..987022,987273..987353,987782..987860,988206..988313,988439..988559,988905..988989)
location: region:982268-988989:1
so has part: feature:982268-982441:1:exon
so has part: feature:984438-984488:1:exon
so has part: feature:985318-985441:1:exon
so has part: feature:985566-985677:1:exon
so has part: feature:986013-986123:1:exon
so has part: feature:986607-986671:1:exon
so has part: feature:986919-987022:1:exon
so has part: feature:987273-987353:1:exon
so has part: feature:987782-987860:1:exon
so has part: feature:988206-988313:1:exon
so has part: feature:988439-988559:1:exon
so has part: feature:988905-988989:1:exon

XP_015193009.1
type: Protein
SIO_000068: ncbiprotein

position:982268:1
position: 982268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982268-982441:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:984438-984488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985318-985441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:985566-985677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986013-986123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986607-986671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986919-987022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987273-987353:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987782-987860:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:988206-988313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:988439-988559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988905-988989:1:exon

tbcel
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: tbcel
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 995734..1019895
location: region:995734-1019895:1
so has part: feature:995734-1019895:1:exon
subclass of: SO_0000010

102690105
type: Gene
SIO_000068: ncbigene

position:995734:1
position: 995734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1019895:1
position: 1019895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:995734-1019895:1:exon

tbcel
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: tbcel
product: tubulin folding cofactor E-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015337516.1
SIO_010081: tbcel
subclass of: SO_0000673
so part of: tbcel
location: join(995734..995884,999389..999470,1000114..1000182,1000779..1000833,1001110..1001268,1004084..1004223,1004495..1004676,1005068..1005324,1006697..1006823,1008105..1008221,1012682..1019895)
location: region:995734-1019895:1
so has part: feature:995734-995884:1:exon
so has part: feature:999389-999470:1:exon
so has part: feature:1000114-1000182:1:exon
so has part: feature:1000779-1000833:1:exon
so has part: feature:1001110-1001268:1:exon
so has part: feature:1004084-1004223:1:exon
so has part: feature:1004495-1004676:1:exon
so has part: feature:1005068-1005324:1:exon
so has part: feature:1006697-1006823:1:exon
so has part: feature:1008105-1008221:1:exon
so has part: feature:1012682-1019895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:995734-995884:1:exon

position:995884:1
position: 995884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:999389-999470:1:exon

position:999389:1
position: 999389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999470:1
position: 999470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1000114-1000182:1:exon

position:1000114:1
position: 1000114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000182:1
position: 1000182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1000779-1000833:1:exon

position:1000779:1
position: 1000779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000833:1
position: 1000833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1001110-1001268:1:exon

position:1001110:1
position: 1001110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001268:1
position: 1001268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1004084-1004223:1:exon

position:1004084:1
position: 1004084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004223:1
position: 1004223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1004495-1004676:1:exon

position:1004495:1
position: 1004495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004676:1
position: 1004676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1005068-1005324:1:exon

position:1005068:1
position: 1005068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1005324:1
position: 1005324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1006697-1006823:1:exon

position:1006697:1
position: 1006697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006823:1
position: 1006823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1008105-1008221:1:exon

position:1008105:1
position: 1008105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008221:1
position: 1008221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1012682-1019895:1:exon

position:1012682:1
position: 1012682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tbcel
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: tbcel
product: tubulin folding cofactor E-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_006642152.2
SIO_010081: tbcel
subclass of: SO_0000673
so part of: tbcel
location: join(995734..995884,999389..999470,1000243..1000396,1000779..1000833,1001110..1001268,1004084..1004223,1004495..1004676,1005068..1005324,1006697..1006823,1008105..1008221,1012682..1019895)
location: region:995734-1019895:1
so has part: feature:995734-995884:1:exon
so has part: feature:999389-999470:1:exon
so has part: feature:1000243-1000396:1:exon
so has part: feature:1000779-1000833:1:exon
so has part: feature:1001110-1001268:1:exon
so has part: feature:1004084-1004223:1:exon
so has part: feature:1004495-1004676:1:exon
so has part: feature:1005068-1005324:1:exon
so has part: feature:1006697-1006823:1:exon
so has part: feature:1008105-1008221:1:exon
so has part: feature:1012682-1019895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:995734-995884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:999389-999470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1000243-1000396:1:exon

position:1000243:1
position: 1000243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000396:1
position: 1000396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1000779-1000833:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1001110-1001268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1004084-1004223:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1004495-1004676:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1005068-1005324:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1006697-1006823:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1008105-1008221:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1012682-1019895:1:exon

tbcel
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: tbcel
product: tubulin folding cofactor E-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015337513.1
SIO_010081: tbcel
subclass of: SO_0000673
so part of: tbcel
location: join(995735..995884,999389..999470,1000114..1000182,1000779..1000833,1001050..1001268,1004084..1004223,1004495..1004676,1005068..1005324,1006697..1006823,1008105..1008221,1012682..1019895)
location: region:995735-1019895:1
so has part: feature:995735-995884:1:exon
so has part: feature:999389-999470:1:exon
so has part: feature:1000114-1000182:1:exon
so has part: feature:1000779-1000833:1:exon
so has part: feature:1001050-1001268:1:exon
so has part: feature:1004084-1004223:1:exon
so has part: feature:1004495-1004676:1:exon
so has part: feature:1005068-1005324:1:exon
so has part: feature:1006697-1006823:1:exon
so has part: feature:1008105-1008221:1:exon
so has part: feature:1012682-1019895:1:exon

position:995735:1
position: 995735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:995735-995884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:999389-999470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1000114-1000182:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1000779-1000833:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1001050-1001268:1:exon

position:1001050:1
position: 1001050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1004084-1004223:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1004495-1004676:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1005068-1005324:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1006697-1006823:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1008105-1008221:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1012682-1019895:1:exon

tbcel
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: tbcel
product: tubulin folding cofactor E-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015337511.1
SIO_010081: tbcel
subclass of: SO_0000673
so part of: tbcel
location: join(995735..995884,999389..999470,1000243..1000396,1000779..1000833,1001050..1001268,1004084..1004223,1004495..1004676,1005068..1005324,1006697..1006823,1008105..1008221,1012682..1019895)
location: region:995735-1019895:1
so has part: feature:995735-995884:1:exon
so has part: feature:999389-999470:1:exon
so has part: feature:1000243-1000396:1:exon
so has part: feature:1000779-1000833:1:exon
so has part: feature:1001050-1001268:1:exon
so has part: feature:1004084-1004223:1:exon
so has part: feature:1004495-1004676:1:exon
so has part: feature:1005068-1005324:1:exon
so has part: feature:1006697-1006823:1:exon
so has part: feature:1008105-1008221:1:exon
so has part: feature:1012682-1019895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:995735-995884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:999389-999470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1000243-1000396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1000779-1000833:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1001050-1001268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1004084-1004223:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1004495-1004676:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1005068-1005324:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1006697-1006823:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1008105-1008221:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1012682-1019895:1:exon

tbcel
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: tbcel
product: tubulin folding cofactor E-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015337515.1
SIO_010081: tbcel
subclass of: SO_0000673
so part of: tbcel
location: join(995735..995884,999389..999470,1000243..1000396,1000779..1000833,1001054..1001268,1004084..1004223,1004495..1004676,1005068..1005324,1006697..1006823,1008105..1008221,1012682..1019895)
location: region:995735-1019895:1
so has part: feature:995735-995884:1:exon
so has part: feature:999389-999470:1:exon
so has part: feature:1000243-1000396:1:exon
so has part: feature:1000779-1000833:1:exon
so has part: feature:1001054-1001268:1:exon
so has part: feature:1004084-1004223:1:exon
so has part: feature:1004495-1004676:1:exon
so has part: feature:1005068-1005324:1:exon
so has part: feature:1006697-1006823:1:exon
so has part: feature:1008105-1008221:1:exon
so has part: feature:1012682-1019895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:995735-995884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:999389-999470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1000243-1000396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1000779-1000833:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1001054-1001268:1:exon

position:1001054:1
position: 1001054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1004084-1004223:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1004495-1004676:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1005068-1005324:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1006697-1006823:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1008105-1008221:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1012682-1019895:1:exon

tbcel
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: tbcel
product: tubulin folding cofactor E-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015337514.1
SIO_010081: tbcel
subclass of: SO_0000673
so part of: tbcel
location: join(995735..995884,999389..999470,1000779..1000833,1001050..1001268,1004084..1004223,1004495..1004676,1005068..1005324,1006697..1006823,1008105..1008221,1012682..1019895)
location: region:995735-1019895:1
so has part: feature:995735-995884:1:exon
so has part: feature:999389-999470:1:exon
so has part: feature:1000779-1000833:1:exon
so has part: feature:1001050-1001268:1:exon
so has part: feature:1004084-1004223:1:exon
so has part: feature:1004495-1004676:1:exon
so has part: feature:1005068-1005324:1:exon
so has part: feature:1006697-1006823:1:exon
so has part: feature:1008105-1008221:1:exon
so has part: feature:1012682-1019895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:995735-995884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:999389-999470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1000779-1000833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1001050-1001268:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1004084-1004223:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1004495-1004676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1005068-1005324:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1006697-1006823:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1008105-1008221:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1012682-1019895:1:exon

tbcel
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: tbcel
product: tubulin folding cofactor E-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015337512.1
SIO_010081: tbcel
subclass of: SO_0000673
so part of: tbcel
location: join(995914..996132,999389..999470,1000243..1000396,1000779..1000833,1001050..1001268,1004084..1004223,1004495..1004676,1005068..1005324,1006697..1006823,1008105..1008221,1012682..1019895)
location: region:995914-1019895:1
so has part: feature:995914-996132:1:exon
so has part: feature:999389-999470:1:exon
so has part: feature:1000243-1000396:1:exon
so has part: feature:1000779-1000833:1:exon
so has part: feature:1001050-1001268:1:exon
so has part: feature:1004084-1004223:1:exon
so has part: feature:1004495-1004676:1:exon
so has part: feature:1005068-1005324:1:exon
so has part: feature:1006697-1006823:1:exon
so has part: feature:1008105-1008221:1:exon
so has part: feature:1012682-1019895:1:exon

position:995914:1
position: 995914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:995914-996132:1:exon

position:996132:1
position: 996132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:999389-999470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1000243-1000396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1000779-1000833:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1001050-1001268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1004084-1004223:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1004495-1004676:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1005068-1005324:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1006697-1006823:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1008105-1008221:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1012682-1019895:1:exon

tbcel
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: tbcel
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone cofactor E-like protein isoform X2
translation: MSVWLFCRCGPADGEVLWDGAMEQAEGRTFMQVISEKYSPENFPYRRGPGMGVVVPAGPQGSPMKDRLNLPSVLVLNGCGISSAGDESEIAAFCAHVVELDLSDNKLQDWQEISKIVSNIPHLDFLNLSSNPLSEAVLERSCAETFSRVRRLVLNNTRVSWDTVHTFTGEIPELEQLFLCLNEYDTVSPSTAPCPSLRLLHITDNNLQDWSEVRKFGVLFPGLESLILANNNLASIEDSGDTLRRLFPSLRSINLHNSGLSTWEDIEKLNFFPKLEDVRVQGIPLLQTYTNTERRSLIVAHLPSVSMLNGSVVTDGEREDAERFFIRYHLDYPEEELPYRYHCLVTKYGKLAPLADIDLRPRCYAKVEVHCEDKVELVSIRLDQTVAELKKQLRTVVQLPTNNMRLYYIDKEVACVFGPEEMKYSTRALHSYSIRDGDEILVVPKSK
SIO_010081: tbcel
subclass of: SO_0000673
so part of: tbcel
location: join(1001073..1001268,1004084..1004223,1004495..1004676,1005068..1005324,1006697..1006823,1008105..1008221,1012682..1013006)
location: region:1001073-1013006:1
so has part: feature:1001073-1001268:1:exon
so has part: feature:1004084-1004223:1:exon
so has part: feature:1004495-1004676:1:exon
so has part: feature:1005068-1005324:1:exon
so has part: feature:1006697-1006823:1:exon
so has part: feature:1008105-1008221:1:exon
so has part: feature:1012682-1013006:1:exon

XP_015192997.1
type: Protein
SIO_000068: ncbiprotein

position:1001073:1
position: 1001073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013006:1
position: 1013006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1001073-1001268:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1004084-1004223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004495-1004676:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1005068-1005324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006697-1006823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1008105-1008221:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1012682-1013006:1:exon

tbcel
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: tbcel
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone cofactor E-like protein isoform X2
translation: MSVWLFCRCGPADGEVLWDGAMEQAEGRTFMQVISEKYSPENFPYRRGPGMGVVVPAGPQGSPMKDRLNLPSVLVLNGCGISSAGDESEIAAFCAHVVELDLSDNKLQDWQEISKIVSNIPHLDFLNLSSNPLSEAVLERSCAETFSRVRRLVLNNTRVSWDTVHTFTGEIPELEQLFLCLNEYDTVSPSTAPCPSLRLLHITDNNLQDWSEVRKFGVLFPGLESLILANNNLASIEDSGDTLRRLFPSLRSINLHNSGLSTWEDIEKLNFFPKLEDVRVQGIPLLQTYTNTERRSLIVAHLPSVSMLNGSVVTDGEREDAERFFIRYHLDYPEEELPYRYHCLVTKYGKLAPLADIDLRPRCYAKVEVHCEDKVELVSIRLDQTVAELKKQLRTVVQLPTNNMRLYYIDKEVACVFGPEEMKYSTRALHSYSIRDGDEILVVPKSK
SIO_010081: tbcel
subclass of: SO_0000673
so part of: tbcel
location: join(1001073..1001268,1004084..1004223,1004495..1004676,1005068..1005324,1006697..1006823,1008105..1008221,1012682..1013006)
location: region:1001073-1013006:1
so has part: feature:1001073-1001268:1:exon
so has part: feature:1004084-1004223:1:exon
so has part: feature:1004495-1004676:1:exon
so has part: feature:1005068-1005324:1:exon
so has part: feature:1006697-1006823:1:exon
so has part: feature:1008105-1008221:1:exon
so has part: feature:1012682-1013006:1:exon

XP_015192998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1001073-1001268:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1004084-1004223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004495-1004676:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1005068-1005324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006697-1006823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1008105-1008221:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1012682-1013006:1:exon

tbcel
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: tbcel
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone cofactor E-like protein isoform X2
translation: MSVWLFCRCGPADGEVLWDGAMEQAEGRTFMQVISEKYSPENFPYRRGPGMGVVVPAGPQGSPMKDRLNLPSVLVLNGCGISSAGDESEIAAFCAHVVELDLSDNKLQDWQEISKIVSNIPHLDFLNLSSNPLSEAVLERSCAETFSRVRRLVLNNTRVSWDTVHTFTGEIPELEQLFLCLNEYDTVSPSTAPCPSLRLLHITDNNLQDWSEVRKFGVLFPGLESLILANNNLASIEDSGDTLRRLFPSLRSINLHNSGLSTWEDIEKLNFFPKLEDVRVQGIPLLQTYTNTERRSLIVAHLPSVSMLNGSVVTDGEREDAERFFIRYHLDYPEEELPYRYHCLVTKYGKLAPLADIDLRPRCYAKVEVHCEDKVELVSIRLDQTVAELKKQLRTVVQLPTNNMRLYYIDKEVACVFGPEEMKYSTRALHSYSIRDGDEILVVPKSK
SIO_010081: tbcel
subclass of: SO_0000673
so part of: tbcel
location: join(1001073..1001268,1004084..1004223,1004495..1004676,1005068..1005324,1006697..1006823,1008105..1008221,1012682..1013006)
location: region:1001073-1013006:1
so has part: feature:1001073-1001268:1:exon
so has part: feature:1004084-1004223:1:exon
so has part: feature:1004495-1004676:1:exon
so has part: feature:1005068-1005324:1:exon
so has part: feature:1006697-1006823:1:exon
so has part: feature:1008105-1008221:1:exon
so has part: feature:1012682-1013006:1:exon

XP_015192999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1001073-1001268:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1004084-1004223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004495-1004676:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1005068-1005324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006697-1006823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1008105-1008221:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1012682-1013006:1:exon

tbcel
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: tbcel
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone cofactor E-like protein isoform X2
translation: MSVWLFCRCGPADGEVLWDGAMEQAEGRTFMQVISEKYSPENFPYRRGPGMGVVVPAGPQGSPMKDRLNLPSVLVLNGCGISSAGDESEIAAFCAHVVELDLSDNKLQDWQEISKIVSNIPHLDFLNLSSNPLSEAVLERSCAETFSRVRRLVLNNTRVSWDTVHTFTGEIPELEQLFLCLNEYDTVSPSTAPCPSLRLLHITDNNLQDWSEVRKFGVLFPGLESLILANNNLASIEDSGDTLRRLFPSLRSINLHNSGLSTWEDIEKLNFFPKLEDVRVQGIPLLQTYTNTERRSLIVAHLPSVSMLNGSVVTDGEREDAERFFIRYHLDYPEEELPYRYHCLVTKYGKLAPLADIDLRPRCYAKVEVHCEDKVELVSIRLDQTVAELKKQLRTVVQLPTNNMRLYYIDKEVACVFGPEEMKYSTRALHSYSIRDGDEILVVPKSK
SIO_010081: tbcel
subclass of: SO_0000673
so part of: tbcel
location: join(1001073..1001268,1004084..1004223,1004495..1004676,1005068..1005324,1006697..1006823,1008105..1008221,1012682..1013006)
location: region:1001073-1013006:1
so has part: feature:1001073-1001268:1:exon
so has part: feature:1004084-1004223:1:exon
so has part: feature:1004495-1004676:1:exon
so has part: feature:1005068-1005324:1:exon
so has part: feature:1006697-1006823:1:exon
so has part: feature:1008105-1008221:1:exon
so has part: feature:1012682-1013006:1:exon

XP_015193000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1001073-1001268:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1004084-1004223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004495-1004676:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1005068-1005324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006697-1006823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1008105-1008221:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1012682-1013006:1:exon

tbcel
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: tbcel
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone cofactor E-like protein isoform X2
translation: MSVWLFCRCGPADGEVLWDGAMEQAEGRTFMQVISEKYSPENFPYRRGPGMGVVVPAGPQGSPMKDRLNLPSVLVLNGCGISSAGDESEIAAFCAHVVELDLSDNKLQDWQEISKIVSNIPHLDFLNLSSNPLSEAVLERSCAETFSRVRRLVLNNTRVSWDTVHTFTGEIPELEQLFLCLNEYDTVSPSTAPCPSLRLLHITDNNLQDWSEVRKFGVLFPGLESLILANNNLASIEDSGDTLRRLFPSLRSINLHNSGLSTWEDIEKLNFFPKLEDVRVQGIPLLQTYTNTERRSLIVAHLPSVSMLNGSVVTDGEREDAERFFIRYHLDYPEEELPYRYHCLVTKYGKLAPLADIDLRPRCYAKVEVHCEDKVELVSIRLDQTVAELKKQLRTVVQLPTNNMRLYYIDKEVACVFGPEEMKYSTRALHSYSIRDGDEILVVPKSK
SIO_010081: tbcel
subclass of: SO_0000673
so part of: tbcel
location: join(1001073..1001268,1004084..1004223,1004495..1004676,1005068..1005324,1006697..1006823,1008105..1008221,1012682..1013006)
location: region:1001073-1013006:1
so has part: feature:1001073-1001268:1:exon
so has part: feature:1004084-1004223:1:exon
so has part: feature:1004495-1004676:1:exon
so has part: feature:1005068-1005324:1:exon
so has part: feature:1006697-1006823:1:exon
so has part: feature:1008105-1008221:1:exon
so has part: feature:1012682-1013006:1:exon

XP_015193001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1001073-1001268:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1004084-1004223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004495-1004676:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1005068-1005324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006697-1006823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1008105-1008221:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1012682-1013006:1:exon

tbcel
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: tbcel
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone cofactor E-like protein isoform X3
translation: MEQAEGRTFMQVISEKYSPENFPYRRGPGMGVVVPAGPQGSPMKDRLNLPSVLVLNGCGISSAGDESEIAAFCAHVVELDLSDNKLQDWQEISKIVSNIPHLDFLNLSSNPLSEAVLERSCAETFSRVRRLVLNNTRVSWDTVHTFTGEIPELEQLFLCLNEYDTVSPSTAPCPSLRLLHITDNNLQDWSEVRKFGVLFPGLESLILANNNLASIEDSGDTLRRLFPSLRSINLHNSGLSTWEDIEKLNFFPKLEDVRVQGIPLLQTYTNTERRSLIVAHLPSVSMLNGSVVTDGEREDAERFFIRYHLDYPEEELPYRYHCLVTKYGKLAPLADIDLRPRCYAKVEVHCEDKVELVSIRLDQTVAELKKQLRTVVQLPTNNMRLYYIDKEVACVFGPEEMKYSTRALHSYSIRDGDEILVVPKSK
SIO_010081: tbcel
subclass of: SO_0000673
so part of: tbcel
location: join(1001136..1001268,1004084..1004223,1004495..1004676,1005068..1005324,1006697..1006823,1008105..1008221,1012682..1013006)
location: region:1001136-1013006:1
so has part: feature:1001136-1001268:1:exon
so has part: feature:1004084-1004223:1:exon
so has part: feature:1004495-1004676:1:exon
so has part: feature:1005068-1005324:1:exon
so has part: feature:1006697-1006823:1:exon
so has part: feature:1008105-1008221:1:exon
so has part: feature:1012682-1013006:1:exon

XP_006642215.1
type: Protein
SIO_000068: ncbiprotein

position:1001136:1
position: 1001136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1001136-1001268:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1004084-1004223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004495-1004676:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1005068-1005324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006697-1006823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1008105-1008221:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1012682-1013006:1:exon

tbcel
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: tbcel
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone cofactor E-like protein isoform X3
translation: MEQAEGRTFMQVISEKYSPENFPYRRGPGMGVVVPAGPQGSPMKDRLNLPSVLVLNGCGISSAGDESEIAAFCAHVVELDLSDNKLQDWQEISKIVSNIPHLDFLNLSSNPLSEAVLERSCAETFSRVRRLVLNNTRVSWDTVHTFTGEIPELEQLFLCLNEYDTVSPSTAPCPSLRLLHITDNNLQDWSEVRKFGVLFPGLESLILANNNLASIEDSGDTLRRLFPSLRSINLHNSGLSTWEDIEKLNFFPKLEDVRVQGIPLLQTYTNTERRSLIVAHLPSVSMLNGSVVTDGEREDAERFFIRYHLDYPEEELPYRYHCLVTKYGKLAPLADIDLRPRCYAKVEVHCEDKVELVSIRLDQTVAELKKQLRTVVQLPTNNMRLYYIDKEVACVFGPEEMKYSTRALHSYSIRDGDEILVVPKSK
SIO_010081: tbcel
subclass of: SO_0000673
so part of: tbcel
location: join(1001136..1001268,1004084..1004223,1004495..1004676,1005068..1005324,1006697..1006823,1008105..1008221,1012682..1013006)
location: region:1001136-1013006:1
so has part: feature:1001136-1001268:1:exon
so has part: feature:1004084-1004223:1:exon
so has part: feature:1004495-1004676:1:exon
so has part: feature:1005068-1005324:1:exon
so has part: feature:1006697-1006823:1:exon
so has part: feature:1008105-1008221:1:exon
so has part: feature:1012682-1013006:1:exon

XP_015193002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1001136-1001268:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1004084-1004223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004495-1004676:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1005068-1005324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006697-1006823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1008105-1008221:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1012682-1013006:1:exon

tbcel
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: tbcel
product: tubulin folding cofactor E-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015337510.1
SIO_010081: tbcel
subclass of: SO_0000673
so part of: tbcel
location: join(1001285..1002368,1004084..1004223,1004495..1004676,1005068..1005324,1006697..1006823,1008105..1008221,1012682..1019895)
location: region:1001285-1019895:1
so has part: feature:1001285-1002368:1:exon
so has part: feature:1004084-1004223:1:exon
so has part: feature:1004495-1004676:1:exon
so has part: feature:1005068-1005324:1:exon
so has part: feature:1006697-1006823:1:exon
so has part: feature:1008105-1008221:1:exon
so has part: feature:1012682-1019895:1:exon

position:1001285:1
position: 1001285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1001285-1002368:1:exon

position:1002368:1
position: 1002368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1004084-1004223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004495-1004676:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1005068-1005324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006697-1006823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1008105-1008221:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1012682-1019895:1:exon

tbcel
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: tbcel
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone cofactor E-like protein isoform X1
translation: MLDFCCKPFCCRFTPVFRIVVMLTQLLLSFRSRRDTLKFSCRICRYYLEFIVPSMSASCPGPEAAPNHDAPSTMLHIWEEVFCVDRLNLPSVLVLNGCGISSAGDESEIAAFCAHVVELDLSDNKLQDWQEISKIVSNIPHLDFLNLSSNPLSEAVLERSCAETFSRVRRLVLNNTRVSWDTVHTFTGEIPELEQLFLCLNEYDTVSPSTAPCPSLRLLHITDNNLQDWSEVRKFGVLFPGLESLILANNNLASIEDSGDTLRRLFPSLRSINLHNSGLSTWEDIEKLNFFPKLEDVRVQGIPLLQTYTNTERRSLIVAHLPSVSMLNGSVVTDGEREDAERFFIRYHLDYPEEELPYRYHCLVTKYGKLAPLADIDLRPRCYAKVEVHCEDKVELVSIRLDQTVAELKKQLRTVVQLPTNNMRLYYIDKEVACVFGPEEMKYSTRALHSYSIRDGDEILVVPKSK
SIO_010081: tbcel
subclass of: SO_0000673
so part of: tbcel
location: join(1002116..1002368,1004084..1004223,1004495..1004676,1005068..1005324,1006697..1006823,1008105..1008221,1012682..1013006)
location: region:1002116-1013006:1
so has part: feature:1002116-1002368:1:exon
so has part: feature:1004084-1004223:1:exon
so has part: feature:1004495-1004676:1:exon
so has part: feature:1005068-1005324:1:exon
so has part: feature:1006697-1006823:1:exon
so has part: feature:1008105-1008221:1:exon
so has part: feature:1012682-1013006:1:exon

XP_015192996.1
type: Protein
SIO_000068: ncbiprotein

position:1002116:1
position: 1002116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002116-1002368:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1004084-1004223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004495-1004676:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1005068-1005324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006697-1006823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1008105-1008221:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1012682-1013006:1:exon

tecta
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: tecta
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1022249..1046075
location: region:1022249-1046075:1
so has part: feature:1022249-1046075:1:exon
subclass of: SO_0000010

102683483
type: Gene
SIO_000068: ncbigene

position:1022249:1
position: 1022249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046075:1
position: 1046075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1022249-1046075:1:exon

tecta
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: tecta
product: tectorin alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015337320.1
SIO_010081: tecta
subclass of: SO_0000673
so part of: tecta
location: join(1022249..1023981,1026028..1026167,1026277..1026564,1026895..1027032,1027719..1027884,1028716..1029128,1029347..1029917,1030149..1030750,1032724..1033294,1033705..1034321,1034714..1035392,1035716..1035915,1036085..1036465,1039091..1039377,1039594..1039874,1040418..1040528,1040915..1041117,1041311..1041474,1041837..1042085,1042659..1042821,1043322..1043409,1043717..1043836,1045663..1046075)
location: region:1022249-1046075:1
so has part: feature:1022249-1023981:1:exon
so has part: feature:1026028-1026167:1:exon
so has part: feature:1026277-1026564:1:exon
so has part: feature:1026895-1027032:1:exon
so has part: feature:1027719-1027884:1:exon
so has part: feature:1028716-1029128:1:exon
so has part: feature:1029347-1029917:1:exon
so has part: feature:1030149-1030750:1:exon
so has part: feature:1032724-1033294:1:exon
so has part: feature:1033705-1034321:1:exon
so has part: feature:1034714-1035392:1:exon
so has part: feature:1035716-1035915:1:exon
so has part: feature:1036085-1036465:1:exon
so has part: feature:1039091-1039377:1:exon
so has part: feature:1039594-1039874:1:exon
so has part: feature:1040418-1040528:1:exon
so has part: feature:1040915-1041117:1:exon
so has part: feature:1041311-1041474:1:exon
so has part: feature:1041837-1042085:1:exon
so has part: feature:1042659-1042821:1:exon
so has part: feature:1043322-1043409:1:exon
so has part: feature:1043717-1043836:1:exon
so has part: feature:1045663-1046075:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1022249-1023981:1:exon

position:1023981:1
position: 1023981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1026028-1026167:1:exon

position:1026028:1
position: 1026028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026167:1
position: 1026167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1026277-1026564:1:exon

position:1026277:1
position: 1026277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026564:1
position: 1026564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1026895-1027032:1:exon

position:1026895:1
position: 1026895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027032:1
position: 1027032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1027719-1027884:1:exon

position:1027719:1
position: 1027719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027884:1
position: 1027884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1028716-1029128:1:exon

position:1028716:1
position: 1028716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029128:1
position: 1029128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1029347-1029917:1:exon

position:1029347:1
position: 1029347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029917:1
position: 1029917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1030149-1030750:1:exon

position:1030149:1
position: 1030149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030750:1
position: 1030750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1032724-1033294:1:exon

position:1032724:1
position: 1032724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033294:1
position: 1033294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1033705-1034321:1:exon

position:1033705:1
position: 1033705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034321:1
position: 1034321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1034714-1035392:1:exon

position:1034714:1
position: 1034714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035392:1
position: 1035392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1035716-1035915:1:exon

position:1035716:1
position: 1035716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035915:1
position: 1035915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1036085-1036465:1:exon

position:1036085:1
position: 1036085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1036465:1
position: 1036465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1039091-1039377:1:exon

position:1039091:1
position: 1039091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039377:1
position: 1039377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1039594-1039874:1:exon

position:1039594:1
position: 1039594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039874:1
position: 1039874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1040418-1040528:1:exon

position:1040418:1
position: 1040418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040528:1
position: 1040528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1040915-1041117:1:exon

position:1040915:1
position: 1040915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041117:1
position: 1041117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1041311-1041474:1:exon

position:1041311:1
position: 1041311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041474:1
position: 1041474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1041837-1042085:1:exon

position:1041837:1
position: 1041837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042085:1
position: 1042085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1042659-1042821:1:exon

position:1042659:1
position: 1042659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042821:1
position: 1042821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1043322-1043409:1:exon

position:1043322:1
position: 1043322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043409:1
position: 1043409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1043717-1043836:1:exon

position:1043717:1
position: 1043717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043836:1
position: 1043836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1045663-1046075:1:exon

position:1045663:1
position: 1045663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tecta
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: tecta
product: tectorin alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015337321.1
SIO_010081: tecta
subclass of: SO_0000673
so part of: tecta
location: join(1022249..1023981,1026028..1026167,1026277..1026564,1026895..1027032,1027719..1027884,1028716..1029128,1029347..1029917,1030149..1030750,1032724..1033294,1033705..1034321,1034714..1035392,1035716..1035915,1036085..1036465,1039091..1039377,1039594..1039874,1040421..1040507)
location: region:1022249-1040507:1
so has part: feature:1022249-1023981:1:exon
so has part: feature:1026028-1026167:1:exon
so has part: feature:1026277-1026564:1:exon
so has part: feature:1026895-1027032:1:exon
so has part: feature:1027719-1027884:1:exon
so has part: feature:1028716-1029128:1:exon
so has part: feature:1029347-1029917:1:exon
so has part: feature:1030149-1030750:1:exon
so has part: feature:1032724-1033294:1:exon
so has part: feature:1033705-1034321:1:exon
so has part: feature:1034714-1035392:1:exon
so has part: feature:1035716-1035915:1:exon
so has part: feature:1036085-1036465:1:exon
so has part: feature:1039091-1039377:1:exon
so has part: feature:1039594-1039874:1:exon
so has part: feature:1040421-1040507:1:exon

position:1040507:1
position: 1040507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1022249-1023981:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1026028-1026167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1026277-1026564:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1026895-1027032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1027719-1027884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1028716-1029128:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1029347-1029917:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1030149-1030750:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1032724-1033294:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1033705-1034321:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1034714-1035392:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1035716-1035915:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1036085-1036465:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1039091-1039377:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1039594-1039874:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1040421-1040507:1:exon

position:1040421:1
position: 1040421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tecta
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: tecta
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-tectorin isoform X1
translation: MLAVSLMAGCLAVSLFLSPTRMVKQGTPVILIHLIVILAPRAVFSQGILYPFGQAHRDSETPKMDDGSSPEVPLLIQFIFFNMPYRSIFVNNNGVISFNVQVSQFTPEAFPLTDSRSFIAPFWADVHNGIRGDVYYRETTEPDILHRATQDIRKYFKNMASFTATWVFIATWHQVTFYGGSQTTPVNTFQAVLISDGVFFFAMFNYGDISWTTGTASGGDPLTGLGGTAAQSGFNGGDVNHFFNLPGSRSNDVVNIEQTTNVNRPGRWLFRIDGEQIDPANGCSLNGRFYRRGEVFWLSEQCSQKCRCLDLENEIVCQELPCGPLQTCELQEGTYHCQPTRTSTCVVFGDPHYHTFDGFLYHFQGTCSYLLARPCWDIPGLPSFSVEAKNENRVGTAVSWLRDVWVEVYGHRVTLPKGSLGTVQVDGLVKTLPVQLQLGALRVYQSGVAVALETDFGLLVTYDGQHYASISLPSSYFNNTCGLCGNYNDDPADDPVLPSGALAESVVELGGGWQVEDADWRCSDGCAQNCSLCDAATESFYFRPDYCGIINKTDGPFRDCRTVVDPTAFVYSCVYDMCSNRDNITTLCQAIQAYALACQALGVTIRSWRSRTFCALSCPEFSHYQVCTSSCPPSCSDLTSHLYCAHPCTEGCQCGEGYVLSGSRCVPLHECGCERDGLYYPLNESFWAGPAGDCSQRCVCGPQGEISCFNDSCGEGEVCTAELGRLGCYPRREGVCSVAQSQVIATFDGAALPFPDENSYFLLKPCGAGGINVSAPEVKIGRRLGSKGPSWVRPVVARLADLEVQLGGTDFDTVKLNGDAVVLPYVHPLDTLLIYRAPGNATVVEWSGVLAVRYTRQGLLNVTLSTLFYNATCGLCGFFNGNASDELRLPSGKLTDNAELFAEGWRAIADDLTCNGDCEDLYRMCVDLRLYQSPWLCGTINDPANSSFLSCHAAVNPSPFFRNCLYNMCVREGNRSALCSSLQAYASACHDAQVSLGPWRSATSCPLPCPEYSHFEECTTACPPTCANLEPEGICPLPCSEGCQCDDGYALKDGQCIPKADCGCQYRGLQLSTNETFWVDWECQELCYCNGTDNTVYCHSAPCRPEEYCLEDSGLYFCQPRTEAVCIAAGYGHFLPFSGVAFDLQSSCTLRLANTLCEREEELGGQGVPQFSLSARSEDRHTGQAIWVKGFILEVYNYEIEVSRSYKHTITVNNERLYLPLKLGPGKVNIFTFGLQLVVETDFGLKVAYDWKTSLSLTLPRDLYNATCGLCQGLPPGPPTLSANDWGMAWAERDTFCRVGCGDACPRCAHREGGAAGDSGLADNGGNNNGNNNNGNNYHNNGGNNNNNNNALYLGEPVNGYLDPEAMRLCSLIPDRNGAFFRCHSKVAPGYFYQNCLQDSCIDQGALDTVCNWLQIYASICQTQGIPVIGWRNNTPCALSCPANSHYESCMAVCQPQCAPARGPRDCNHYCVEGCQCDQGFVINGKSCILSQNCGCYTDGKYYEPKQLFWNGDCTKRCQCIGRNLIQCDPRRCKSEEECALRHGVRGCFPRRSQHCIASGGGVFRTFDGASLRLPASCSFVLSTICHKLPELSFQLIANFDKWSMPNLTTISHVYLYINEENILISGNTVKVNGTPVSVPFVTGLMTRVSSSEGFLVIDTVQDIQVRYNRFNTLRISMGPRLQNKVCGLCGNYNGDPTDDYITSRGKPAVSAMELAQSWKTNGMQNSCDETQYMALAQSCDNTAIAALQGEDGCLKLTQMKGFFQPCHGLLDPQPFFESCYLDGCYNQQKAQVCGSLAAYAEACRSFGTLSTKWITQENCSEWIYDPCVEEVCTNNTCEQENGGDLCGCPELQDSGNGDDDIIQAEVMCKHSQMEVFISKCKLFQLGFEREDVRINDQHCSGIEGEDFISFQINNTKGHCGSIVQSNGTHIMYKNTVWIESVNNTGNLITRDKTINVEFSCAYELDIKISLETVVKPMLSVINLTLPTQEGSFITKMALY…
SIO_010081: tecta
subclass of: SO_0000673
so part of: tecta
location: join(1023855..1023981,1026028..1026167,1026277..1026564,1026895..1027032,1027719..1027884,1028716..1029128,1029347..1029917,1030149..1030750,1032724..1033294,1033705..1034321,1034714..1035392,1035716..1035915,1036085..1036465,1039091..1039377,1039594..1039874,1040418..1040528,1040915..1041117,1041311..1041474,1041837..1042085,1042659..1042821,1043322..1043409,1043717..1043836,1045663..1045763)
location: region:1023855-1045763:1
so has part: feature:1023855-1023981:1:exon
so has part: feature:1026028-1026167:1:exon
so has part: feature:1026277-1026564:1:exon
so has part: feature:1026895-1027032:1:exon
so has part: feature:1027719-1027884:1:exon
so has part: feature:1028716-1029128:1:exon
so has part: feature:1029347-1029917:1:exon
so has part: feature:1030149-1030750:1:exon
so has part: feature:1032724-1033294:1:exon
so has part: feature:1033705-1034321:1:exon
so has part: feature:1034714-1035392:1:exon
so has part: feature:1035716-1035915:1:exon
so has part: feature:1036085-1036465:1:exon
so has part: feature:1039091-1039377:1:exon
so has part: feature:1039594-1039874:1:exon
so has part: feature:1040418-1040528:1:exon
so has part: feature:1040915-1041117:1:exon
so has part: feature:1041311-1041474:1:exon
so has part: feature:1041837-1042085:1:exon
so has part: feature:1042659-1042821:1:exon
so has part: feature:1043322-1043409:1:exon
so has part: feature:1043717-1043836:1:exon
so has part: feature:1045663-1045763:1:exon

XP_015192806.1
type: Protein
SIO_000068: ncbiprotein

position:1023855:1
position: 1023855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045763:1
position: 1045763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023855-1023981:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1026028-1026167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1026277-1026564:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1026895-1027032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1027719-1027884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1028716-1029128:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1029347-1029917:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1030149-1030750:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1032724-1033294:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1033705-1034321:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1034714-1035392:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1035716-1035915:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1036085-1036465:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1039091-1039377:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1039594-1039874:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1040418-1040528:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1040915-1041117:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1041311-1041474:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1041837-1042085:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1042659-1042821:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1043322-1043409:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1043717-1043836:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1045663-1045763:1:exon

tecta
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: tecta
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-tectorin isoform X2
translation: MLAVSLMAGCLAVSLFLSPTRMVKQGTPVILIHLIVILAPRAVFSQGILYPFGQAHRDSETPKMDDGSSPEVPLLIQFIFFNMPYRSIFVNNNGVISFNVQVSQFTPEAFPLTDSRSFIAPFWADVHNGIRGDVYYRETTEPDILHRATQDIRKYFKNMASFTATWVFIATWHQVTFYGGSQTTPVNTFQAVLISDGVFFFAMFNYGDISWTTGTASGGDPLTGLGGTAAQSGFNGGDVNHFFNLPGSRSNDVVNIEQTTNVNRPGRWLFRIDGEQIDPANGCSLNGRFYRRGEVFWLSEQCSQKCRCLDLENEIVCQELPCGPLQTCELQEGTYHCQPTRTSTCVVFGDPHYHTFDGFLYHFQGTCSYLLARPCWDIPGLPSFSVEAKNENRVGTAVSWLRDVWVEVYGHRVTLPKGSLGTVQVDGLVKTLPVQLQLGALRVYQSGVAVALETDFGLLVTYDGQHYASISLPSSYFNNTCGLCGNYNDDPADDPVLPSGALAESVVELGGGWQVEDADWRCSDGCAQNCSLCDAATESFYFRPDYCGIINKTDGPFRDCRTVVDPTAFVYSCVYDMCSNRDNITTLCQAIQAYALACQALGVTIRSWRSRTFCALSCPEFSHYQVCTSSCPPSCSDLTSHLYCAHPCTEGCQCGEGYVLSGSRCVPLHECGCERDGLYYPLNESFWAGPAGDCSQRCVCGPQGEISCFNDSCGEGEVCTAELGRLGCYPRREGVCSVAQSQVIATFDGAALPFPDENSYFLLKPCGAGGINVSAPEVKIGRRLGSKGPSWVRPVVARLADLEVQLGGTDFDTVKLNGDAVVLPYVHPLDTLLIYRAPGNATVVEWSGVLAVRYTRQGLLNVTLSTLFYNATCGLCGFFNGNASDELRLPSGKLTDNAELFAEGWRAIADDLTCNGDCEDLYRMCVDLRLYQSPWLCGTINDPANSSFLSCHAAVNPSPFFRNCLYNMCVREGNRSALCSSLQAYASACHDAQVSLGPWRSATSCPLPCPEYSHFEECTTACPPTCANLEPEGICPLPCSEGCQCDDGYALKDGQCIPKADCGCQYRGLQLSTNETFWVDWECQELCYCNGTDNTVYCHSAPCRPEEYCLEDSGLYFCQPRTEAVCIAAGYGHFLPFSGVAFDLQSSCTLRLANTLCEREEELGGQGVPQFSLSARSEDRHTGQAIWVKGFILEVYNYEIEVSRSYKHTITVNNERLYLPLKLGPGKVNIFTFGLQLVVETDFGLKVAYDWKTSLSLTLPRDLYNATCGLCQGLPPGPPTLSANDWGMAWAERDTFCRVGCGDACPRCAHREGGAAGDSGLADNGGNNNGNNNNGNNYHNNGGNNNNNNNALYLGEPVNGYLDPEAMRLCSLIPDRNGAFFRCHSKVAPGYFYQNCLQDSCIDQGALDTVCNWLQIYASICQTQGIPVIGWRNNTPCALSCPANSHYESCMAVCQPQCAPARGPRDCNHYCVEGCQCDQGFVINGKSCILSQNCGCYTDGKYYEPKQLFWNGDCTKRCQCIGRNLIQCDPRRCKSEEECALRHGVRGCFPRRSQHCIASGGGVFRTFDGASLRLPASCSFVLSTICHKLPELSFQLIANFDKWSMPNLTTISHVYLYINEENILISGNTVKVNGTPVSVPFVTGLMTRVSSSEGFLVIDTVQDIQVRYNRFNTLRISMGPRLQNKVCGLCGNYNGDPTDDYITSRGKPAVSAMELAQSWKTNGMQNSCDETQYMALAQSCDNTAIAALQGEDGCLKLTQMKGFFQPCHGLLDPQPFFESCYLDGCYNQQKAQVCGSLAAYAEACRSFGTLSTKWITQENC
SIO_010081: tecta
subclass of: SO_0000673
so part of: tecta
location: join(1023855..1023981,1026028..1026167,1026277..1026564,1026895..1027032,1027719..1027884,1028716..1029128,1029347..1029917,1030149..1030750,1032724..1033294,1033705..1034321,1034714..1035392,1035716..1035915,1036085..1036465,1039091..1039377,1039594..1039874,1040421..1040422)
location: region:1023855-1040422:1
so has part: feature:1023855-1023981:1:exon
so has part: feature:1026028-1026167:1:exon
so has part: feature:1026277-1026564:1:exon
so has part: feature:1026895-1027032:1:exon
so has part: feature:1027719-1027884:1:exon
so has part: feature:1028716-1029128:1:exon
so has part: feature:1029347-1029917:1:exon
so has part: feature:1030149-1030750:1:exon
so has part: feature:1032724-1033294:1:exon
so has part: feature:1033705-1034321:1:exon
so has part: feature:1034714-1035392:1:exon
so has part: feature:1035716-1035915:1:exon
so has part: feature:1036085-1036465:1:exon
so has part: feature:1039091-1039377:1:exon
so has part: feature:1039594-1039874:1:exon
so has part: feature:1040421-1040422:1:exon

XP_015192807.1
type: Protein
SIO_000068: ncbiprotein

position:1040422:1
position: 1040422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023855-1023981:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1026028-1026167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1026277-1026564:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1026895-1027032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1027719-1027884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1028716-1029128:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1029347-1029917:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1030149-1030750:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1032724-1033294:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1033705-1034321:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1034714-1035392:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1035716-1035915:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1036085-1036465:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1039091-1039377:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1039594-1039874:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1040421-1040422:1:exon

sik3
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: sik3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1058858..1100072)
location: region:1058858-1100072:-1
so has part: feature:1058858-1100072:-1:exon
subclass of: SO_0000010

102690304
type: Gene
SIO_000068: ncbigene

position:1058858:-1
position: 1058858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100072:-1
position: 1100072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058858-1100072:-1:exon

sik3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: sik3
product: SIK family kinase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015337548.1
SIO_010081: sik3
subclass of: SO_0000673
so part of: sik3
location: complement(join(1058858..1059678,1061930..1062077,1062788..1062920,1063786..1063952,1064794..1065545,1068853..1069135,1072033..1072142,1072564..1072664,1073887..1074006,1074369..1074510,1074767..1074907,1076577..1076650,1077034..1077186,1077897..1078053,1079302..1079411,1079639..1079716,1081424..1081534,1081671..1081789,1083515..1083638,1083917..1084041,1084159..1084320,1084523..1084586,1084887..1085003,1099408..1100072))
location: region:1058858-1100072:-1
so has part: feature:1099408-1100072:-1:exon
so has part: feature:1084887-1085003:-1:exon
so has part: feature:1084523-1084586:-1:exon
so has part: feature:1084159-1084320:-1:exon
so has part: feature:1083917-1084041:-1:exon
so has part: feature:1083515-1083638:-1:exon
so has part: feature:1081671-1081789:-1:exon
so has part: feature:1081424-1081534:-1:exon
so has part: feature:1079639-1079716:-1:exon
so has part: feature:1079302-1079411:-1:exon
so has part: feature:1077897-1078053:-1:exon
so has part: feature:1077034-1077186:-1:exon
so has part: feature:1076577-1076650:-1:exon
so has part: feature:1074767-1074907:-1:exon
so has part: feature:1074369-1074510:-1:exon
so has part: feature:1073887-1074006:-1:exon
so has part: feature:1072564-1072664:-1:exon
so has part: feature:1072033-1072142:-1:exon
so has part: feature:1068853-1069135:-1:exon
so has part: feature:1064794-1065545:-1:exon
so has part: feature:1063786-1063952:-1:exon
so has part: feature:1062788-1062920:-1:exon
so has part: feature:1061930-1062077:-1:exon
so has part: feature:1058858-1059678:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1099408-1100072:-1:exon

position:1099408:-1
position: 1099408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1084887-1085003:-1:exon

position:1084887:-1
position: 1084887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085003:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:1084523-1084586:-1:exon

position:1084523:-1
position: 1084523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084586:-1
position: 1084586
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:1084159-1084320:-1:exon

position:1084159:-1
position: 1084159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084320:-1
position: 1084320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1083917-1084041:-1:exon

position:1083917:-1
position: 1083917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084041:-1
position: 1084041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1083515-1083638:-1:exon

position:1083515:-1
position: 1083515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1083638:-1
position: 1083638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1081671-1081789:-1:exon

position:1081671:-1
position: 1081671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081789:-1
position: 1081789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1081424-1081534:-1:exon

position:1081424:-1
position: 1081424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081534:-1
position: 1081534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1079639-1079716:-1:exon

position:1079639:-1
position: 1079639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079716:-1
position: 1079716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1079302-1079411:-1:exon

position:1079302:-1
position: 1079302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079411:-1
position: 1079411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1077897-1078053:-1:exon

position:1077897:-1
position: 1077897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078053:-1
position: 1078053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1077034-1077186:-1:exon

position:1077034:-1
position: 1077034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077186:-1
position: 1077186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1076577-1076650:-1:exon

position:1076577:-1
position: 1076577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076650:-1
position: 1076650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1074767-1074907:-1:exon

position:1074767:-1
position: 1074767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074907:-1
position: 1074907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1074369-1074510:-1:exon

position:1074369:-1
position: 1074369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074510:-1
position: 1074510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1073887-1074006:-1:exon

position:1073887:-1
position: 1073887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074006:-1
position: 1074006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1072564-1072664:-1:exon

position:1072564:-1
position: 1072564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072664:-1
position: 1072664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1072033-1072142:-1:exon

position:1072033:-1
position: 1072033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072142:-1
position: 1072142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1068853-1069135:-1:exon

position:1068853:-1
position: 1068853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069135:-1
position: 1069135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1064794-1065545:-1:exon

position:1064794:-1
position: 1064794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065545:-1
position: 1065545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1063786-1063952:-1:exon

position:1063786:-1
position: 1063786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1063952:-1
position: 1063952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1062788-1062920:-1:exon

position:1062788:-1
position: 1062788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062920:-1
position: 1062920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1061930-1062077:-1:exon

position:1061930:-1
position: 1061930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062077:-1
position: 1062077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1058858-1059678:-1:exon

position:1059678:-1
position: 1059678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sik3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: sik3
product: SIK family kinase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015337547.1
SIO_010081: sik3
subclass of: SO_0000673
so part of: sik3
location: complement(join(1058858..1059678,1061930..1062077,1062788..1062920,1063786..1063952,1064794..1065545,1068853..1069135,1072033..1072142,1072564..1072664,1073887..1074006,1074369..1074510,1074767..1074907,1076577..1076650,1077034..1077186,1077897..1078053,1079302..1079411,1079639..1079716,1080180..1080317,1081424..1081534,1081671..1081789,1083515..1083638,1083917..1084041,1084159..1084320,1084523..1084586,1084887..1085003,1099408..1100072))
location: region:1058858-1100072:-1
so has part: feature:1099408-1100072:-1:exon
so has part: feature:1084887-1085003:-1:exon
so has part: feature:1084523-1084586:-1:exon
so has part: feature:1084159-1084320:-1:exon
so has part: feature:1083917-1084041:-1:exon
so has part: feature:1083515-1083638:-1:exon
so has part: feature:1081671-1081789:-1:exon
so has part: feature:1081424-1081534:-1:exon
so has part: feature:1080180-1080317:-1:exon
so has part: feature:1079639-1079716:-1:exon
so has part: feature:1079302-1079411:-1:exon
so has part: feature:1077897-1078053:-1:exon
so has part: feature:1077034-1077186:-1:exon
so has part: feature:1076577-1076650:-1:exon
so has part: feature:1074767-1074907:-1:exon
so has part: feature:1074369-1074510:-1:exon
so has part: feature:1073887-1074006:-1:exon
so has part: feature:1072564-1072664:-1:exon
so has part: feature:1072033-1072142:-1:exon
so has part: feature:1068853-1069135:-1:exon
so has part: feature:1064794-1065545:-1:exon
so has part: feature:1063786-1063952:-1:exon
so has part: feature:1062788-1062920:-1:exon
so has part: feature:1061930-1062077:-1:exon
so has part: feature:1058858-1059678:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1099408-1100072:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084887-1085003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084523-1084586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1084159-1084320:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1083917-1084041:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1083515-1083638:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1081671-1081789:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1081424-1081534:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1080180-1080317:-1:exon

position:1080180:-1
position: 1080180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080317:-1
position: 1080317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1079639-1079716:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1079302-1079411:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1077897-1078053:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1077034-1077186:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1076577-1076650:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1074767-1074907:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1074369-1074510:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1073887-1074006:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1072564-1072664:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1072033-1072142:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1068853-1069135:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1064794-1065545:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1063786-1063952:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1062788-1062920:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1061930-1062077:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1058858-1059678:-1:exon

sik3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: sik3
product: SIK family kinase 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015337549.1
SIO_010081: sik3
subclass of: SO_0000673
so part of: sik3
location: complement(join(1058858..1059678,1061930..1062077,1062788..1062920,1063786..1063952,1064794..1065545,1068853..1069135,1072033..1072142,1072564..1072664,1073887..1074006,1074369..1074510,1074767..1074907,1076577..1076650,1077034..1077186,1077897..1078053,1079302..1079411,1079639..1079716,1080180..1080317,1081424..1081534,1081671..1081789,1083515..1083638,1083917..1084041,1084159..1084320,1084523..1084586,1084887..1085003,1099219..1099351))
location: region:1058858-1099351:-1
so has part: feature:1099219-1099351:-1:exon
so has part: feature:1084887-1085003:-1:exon
so has part: feature:1084523-1084586:-1:exon
so has part: feature:1084159-1084320:-1:exon
so has part: feature:1083917-1084041:-1:exon
so has part: feature:1083515-1083638:-1:exon
so has part: feature:1081671-1081789:-1:exon
so has part: feature:1081424-1081534:-1:exon
so has part: feature:1080180-1080317:-1:exon
so has part: feature:1079639-1079716:-1:exon
so has part: feature:1079302-1079411:-1:exon
so has part: feature:1077897-1078053:-1:exon
so has part: feature:1077034-1077186:-1:exon
so has part: feature:1076577-1076650:-1:exon
so has part: feature:1074767-1074907:-1:exon
so has part: feature:1074369-1074510:-1:exon
so has part: feature:1073887-1074006:-1:exon
so has part: feature:1072564-1072664:-1:exon
so has part: feature:1072033-1072142:-1:exon
so has part: feature:1068853-1069135:-1:exon
so has part: feature:1064794-1065545:-1:exon
so has part: feature:1063786-1063952:-1:exon
so has part: feature:1062788-1062920:-1:exon
so has part: feature:1061930-1062077:-1:exon
so has part: feature:1058858-1059678:-1:exon

position:1099351:-1
position: 1099351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1099219-1099351:-1:exon

position:1099219:-1
position: 1099219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1084887-1085003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084523-1084586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1084159-1084320:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1083917-1084041:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1083515-1083638:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1081671-1081789:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1081424-1081534:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1080180-1080317:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1079639-1079716:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1079302-1079411:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1077897-1078053:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1077034-1077186:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1076577-1076650:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1074767-1074907:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1074369-1074510:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1073887-1074006:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1072564-1072664:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1072033-1072142:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1068853-1069135:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1064794-1065545:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1063786-1063952:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1062788-1062920:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1061930-1062077:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1058858-1059678:-1:exon

sik3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: sik3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SIK3 isoform X2
translation: MAAVSSGGAAGPVTAGITHSSRPASTGMGAQNRAQPPAGITHPNRAAQAAGCITNPGHLPGGRPPPARVGPYEIERTIGKGNFAVVKLATHIITRAKVAIKIVDKTQLDDENLKKIFREVQIMKMLRHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKDARRKFKQIVAAVHFCHCRNIVHRDLKAENLLLDHNLNIKIADFGFSNIYSRGQLLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFMSTDCEYLIRHMLVLEPSKRLSMEQICKNKWMKQGDPDPEFDRLIAECEQVKSEQQTEPINEQVLLAMVEMGLDRERTLQADQPGNPVSITVPHVQLINPDNQIVETDGAMALDSDEGEEPSPEAMARYLSMRRHTVGVPDPRTEMQEELQKLAPGFPRVAPQPPFLPLAPNVSVMQNLMPMQILQPATQQLEYKEQSLLQPPTLQLLNGMGPLGRRASDGGANIQLHAQQLLKKPRGQSPLVTSPHPIPAVTPVDEEGSDGEPDPEAVQRYLATTSKRHTMHAMTNSPAEAPPDQQRQQSSRPRVWAQHLPLEQHCRSSYKDCNTLHLPTERFSPVRRFSDGATTIQAFKAHLENSSIIKQLKQECEQLQKMYAAPQDERLLEHTQQQHILYQQEQQILHQQLQECIRSPQPSPPLQALSLGQHGEAQPSLLTHQLQRLRIQPSSPPPTHPSNHLFRQPNQSPPPGSTAMMQGHGGPSSVQYQHGAALYQPPSGSPPPPGLSRVGLSQQQPGLPRSVGMTQGLPPQQVTIQVQEAELGSGAQRQSFLSTPCGHRVLGKQLSADSAETHSRSLGRFSCSTGYDPAQWHPHLFGEGGGRGVAAAAGGYGPYLQGASLKVPGLEAYQAVAAAGGSAAGGGYGSPSALQQALLSPTPPEYRPSQHVTPTLQGLLSPRHSLSGHADPRLPPQDLAALLKRQSPRPAPPPAPPSAPQDYSDMLLLRHLGQGDSMEPPGPPGPGPQPHYSHLLQIRPPDRSPPTLPHSESMEEDEPPPAAYPDGLLVKAGVCGDPDGLLGTPMPSTAPYSTPAHRHGYLRTSSTARDSSAGEHVDRRTPGQAMEVPDHNGVTYPSRGTQNEGYRPRGSLQRHHTIQTCDDAYDQADPMSGMSLLAGKALSSARMSDVILSQSSLTGSQQLRNREETECEVEGGDLSEGTQLHSTPCYPSSCTSDMLLSYKPPDLQYSMEQAGV
SIO_010081: sik3
subclass of: SO_0000673
so part of: sik3
location: complement(join(1061935..1062077,1062788..1062920,1063786..1063952,1064794..1065545,1068853..1069135,1072033..1072142,1072564..1072664,1073887..1074006,1074369..1074510,1074767..1074907,1076577..1076650,1077034..1077186,1077897..1078053,1079302..1079411,1079639..1079716,1081424..1081534,1081671..1081789,1083515..1083638,1083917..1084041,1084159..1084320,1084523..1084586,1084887..1085003,1099408..1099698))
location: region:1061935-1099698:-1
so has part: feature:1099408-1099698:-1:exon
so has part: feature:1084887-1085003:-1:exon
so has part: feature:1084523-1084586:-1:exon
so has part: feature:1084159-1084320:-1:exon
so has part: feature:1083917-1084041:-1:exon
so has part: feature:1083515-1083638:-1:exon
so has part: feature:1081671-1081789:-1:exon
so has part: feature:1081424-1081534:-1:exon
so has part: feature:1079639-1079716:-1:exon
so has part: feature:1079302-1079411:-1:exon
so has part: feature:1077897-1078053:-1:exon
so has part: feature:1077034-1077186:-1:exon
so has part: feature:1076577-1076650:-1:exon
so has part: feature:1074767-1074907:-1:exon
so has part: feature:1074369-1074510:-1:exon
so has part: feature:1073887-1074006:-1:exon
so has part: feature:1072564-1072664:-1:exon
so has part: feature:1072033-1072142:-1:exon
so has part: feature:1068853-1069135:-1:exon
so has part: feature:1064794-1065545:-1:exon
so has part: feature:1063786-1063952:-1:exon
so has part: feature:1062788-1062920:-1:exon
so has part: feature:1061935-1062077:-1:exon

XP_015193034.1
type: Protein
SIO_000068: ncbiprotein

position:1061935:-1
position: 1061935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099698:-1
position: 1099698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1099408-1099698:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084887-1085003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084523-1084586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1084159-1084320:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1083917-1084041:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1083515-1083638:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1081671-1081789:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1081424-1081534:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1079639-1079716:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1079302-1079411:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1077897-1078053:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1077034-1077186:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1076577-1076650:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1074767-1074907:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1074369-1074510:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1073887-1074006:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1072564-1072664:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1072033-1072142:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1068853-1069135:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1064794-1065545:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1063786-1063952:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1062788-1062920:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1061935-1062077:-1:exon

sik3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: sik3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SIK3 isoform X1
translation: MAAVSSGGAAGPVTAGITHSSRPASTGMGAQNRAQPPAGITHPNRAAQAAGCITNPGHLPGGRPPPARVGPYEIERTIGKGNFAVVKLATHIITRAKVAIKIVDKTQLDDENLKKIFREVQIMKMLRHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKDARRKFKQIVAAVHFCHCRNIVHRDLKAENLLLDHNLNIKIADFGFSNIYSRGQLLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFMSTDCEYLIRHMLVLEPSKRLSMEQICKNKWMKQGDPDPEFDRLIAECEQVKSEQQTEPINEQVLLAMVEMGLDRERTLQSLHTDAYDHYSAIYSLLCERLKRHKTLRIAPPTHRAMTYPGINTVQADQPGNPVSITVPHVQLINPDNQIVETDGAMALDSDEGEEPSPEAMARYLSMRRHTVGVPDPRTEMQEELQKLAPGFPRVAPQPPFLPLAPNVSVMQNLMPMQILQPATQQLEYKEQSLLQPPTLQLLNGMGPLGRRASDGGANIQLHAQQLLKKPRGQSPLVTSPHPIPAVTPVDEEGSDGEPDPEAVQRYLATTSKRHTMHAMTNSPAEAPPDQQRQQSSRPRVWAQHLPLEQHCRSSYKDCNTLHLPTERFSPVRRFSDGATTIQAFKAHLENSSIIKQLKQECEQLQKMYAAPQDERLLEHTQQQHILYQQEQQILHQQLQECIRSPQPSPPLQALSLGQHGEAQPSLLTHQLQRLRIQPSSPPPTHPSNHLFRQPNQSPPPGSTAMMQGHGGPSSVQYQHGAALYQPPSGSPPPPGLSRVGLSQQQPGLPRSVGMTQGLPPQQVTIQVQEAELGSGAQRQSFLSTPCGHRVLGKQLSADSAETHSRSLGRFSCSTGYDPAQWHPHLFGEGGGRGVAAAAGGYGPYLQGASLKVPGLEAYQAVAAAGGSAAGGGYGSPSALQQALLSPTPPEYRPSQHVTPTLQGLLSPRHSLSGHADPRLPPQDLAALLKRQSPRPAPPPAPPSAPQDYSDMLLLRHLGQGDSMEPPGPPGPGPQPHYSHLLQIRPPDRSPPTLPHSESMEEDEPPPAAYPDGLLVKAGVCGDPDGLLGTPMPSTAPYSTPAHRHGYLRTSSTARDSSAGEHVDRRTPGQAMEVPDHNGVTYPSRGTQNEGYRPRGSLQRHHTIQTCDDAYDQADPMSGMSLLAGKALSSARMSDVILSQSSLTGSQQLRNREETECEVEGGDLSEGTQLHSTPCYPSSCTSDMLLSYKPPDLQYSMEQAGV
SIO_010081: sik3
subclass of: SO_0000673
so part of: sik3
location: complement(join(1061935..1062077,1062788..1062920,1063786..1063952,1064794..1065545,1068853..1069135,1072033..1072142,1072564..1072664,1073887..1074006,1074369..1074510,1074767..1074907,1076577..1076650,1077034..1077186,1077897..1078053,1079302..1079411,1079639..1079716,1080180..1080317,1081424..1081534,1081671..1081789,1083515..1083638,1083917..1084041,1084159..1084320,1084523..1084586,1084887..1085003,1099408..1099698))
location: region:1061935-1099698:-1
so has part: feature:1099408-1099698:-1:exon
so has part: feature:1084887-1085003:-1:exon
so has part: feature:1084523-1084586:-1:exon
so has part: feature:1084159-1084320:-1:exon
so has part: feature:1083917-1084041:-1:exon
so has part: feature:1083515-1083638:-1:exon
so has part: feature:1081671-1081789:-1:exon
so has part: feature:1081424-1081534:-1:exon
so has part: feature:1080180-1080317:-1:exon
so has part: feature:1079639-1079716:-1:exon
so has part: feature:1079302-1079411:-1:exon
so has part: feature:1077897-1078053:-1:exon
so has part: feature:1077034-1077186:-1:exon
so has part: feature:1076577-1076650:-1:exon
so has part: feature:1074767-1074907:-1:exon
so has part: feature:1074369-1074510:-1:exon
so has part: feature:1073887-1074006:-1:exon
so has part: feature:1072564-1072664:-1:exon
so has part: feature:1072033-1072142:-1:exon
so has part: feature:1068853-1069135:-1:exon
so has part: feature:1064794-1065545:-1:exon
so has part: feature:1063786-1063952:-1:exon
so has part: feature:1062788-1062920:-1:exon
so has part: feature:1061935-1062077:-1:exon

XP_015193033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1099408-1099698:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084887-1085003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084523-1084586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1084159-1084320:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1083917-1084041:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1083515-1083638:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1081671-1081789:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1081424-1081534:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1080180-1080317:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1079639-1079716:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1079302-1079411:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1077897-1078053:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1077034-1077186:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1076577-1076650:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1074767-1074907:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1074369-1074510:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1073887-1074006:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1072564-1072664:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1072033-1072142:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1068853-1069135:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1064794-1065545:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1063786-1063952:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1062788-1062920:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1061935-1062077:-1:exon

sik3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: sik3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SIK3 isoform X3
translation: MKMLRHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKDARRKFKQIVAAVHFCHCRNIVHRDLKAENLLLDHNLNIKIADFGFSNIYSRGQLLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFMSTDCEYLIRHMLVLEPSKRLSMEQICKNKWMKQGDPDPEFDRLIAECEQVKSEQQTEPINEQVLLAMVEMGLDRERTLQSLHTDAYDHYSAIYSLLCERLKRHKTLRIAPPTHRAMTYPGINTVQADQPGNPVSITVPHVQLINPDNQIVETDGAMALDSDEGEEPSPEAMARYLSMRRHTVGVPDPRTEMQEELQKLAPGFPRVAPQPPFLPLAPNVSVMQNLMPMQILQPATQQLEYKEQSLLQPPTLQLLNGMGPLGRRASDGGANIQLHAQQLLKKPRGQSPLVTSPHPIPAVTPVDEEGSDGEPDPEAVQRYLATTSKRHTMHAMTNSPAEAPPDQQRQQSSRPRVWAQHLPLEQHCRSSYKDCNTLHLPTERFSPVRRFSDGATTIQAFKAHLENSSIIKQLKQECEQLQKMYAAPQDERLLEHTQQQHILYQQEQQILHQQLQECIRSPQPSPPLQALSLGQHGEAQPSLLTHQLQRLRIQPSSPPPTHPSNHLFRQPNQSPPPGSTAMMQGHGGPSSVQYQHGAALYQPPSGSPPPPGLSRVGLSQQQPGLPRSVGMTQGLPPQQVTIQVQEAELGSGAQRQSFLSTPCGHRVLGKQLSADSAETHSRSLGRFSCSTGYDPAQWHPHLFGEGGGRGVAAAAGGYGPYLQGASLKVPGLEAYQAVAAAGGSAAGGGYGSPSALQQALLSPTPPEYRPSQHVTPTLQGLLSPRHSLSGHADPRLPPQDLAALLKRQSPRPAPPPAPPSAPQDYSDMLLLRHLGQGDSMEPPGPPGPGPQPHYSHLLQIRPPDRSPPTLPHSESMEEDEPPPAAYPDGLLVKAGVCGDPDGLLGTPMPSTAPYSTPAHRHGYLRTSSTARDSSAGEHVDRRTPGQAMEVPDHNGVTYPSRGTQNEGYRPRGSLQRHHTIQTCDDAYDQADPMSGMSLLAGKALSSARMSDVILSQSSLTGSQQLRNREETECEVEGGDLSEGTQLHSTPCYPSSCTSDMLLSYKPPDLQYSMEQAGV
SIO_010081: sik3
subclass of: SO_0000673
so part of: sik3
location: complement(join(1061935..1062077,1062788..1062920,1063786..1063952,1064794..1065545,1068853..1069135,1072033..1072142,1072564..1072664,1073887..1074006,1074369..1074510,1074767..1074907,1076577..1076650,1077034..1077186,1077897..1078053,1079302..1079411,1079639..1079716,1080180..1080317,1081424..1081534,1081671..1081789,1083515..1083638,1083917..1084041,1084159..1084320,1084523..1084586,1084887..1084928))
location: region:1061935-1084928:-1
so has part: feature:1084887-1084928:-1:exon
so has part: feature:1084523-1084586:-1:exon
so has part: feature:1084159-1084320:-1:exon
so has part: feature:1083917-1084041:-1:exon
so has part: feature:1083515-1083638:-1:exon
so has part: feature:1081671-1081789:-1:exon
so has part: feature:1081424-1081534:-1:exon
so has part: feature:1080180-1080317:-1:exon
so has part: feature:1079639-1079716:-1:exon
so has part: feature:1079302-1079411:-1:exon
so has part: feature:1077897-1078053:-1:exon
so has part: feature:1077034-1077186:-1:exon
so has part: feature:1076577-1076650:-1:exon
so has part: feature:1074767-1074907:-1:exon
so has part: feature:1074369-1074510:-1:exon
so has part: feature:1073887-1074006:-1:exon
so has part: feature:1072564-1072664:-1:exon
so has part: feature:1072033-1072142:-1:exon
so has part: feature:1068853-1069135:-1:exon
so has part: feature:1064794-1065545:-1:exon
so has part: feature:1063786-1063952:-1:exon
so has part: feature:1062788-1062920:-1:exon
so has part: feature:1061935-1062077:-1:exon

XP_015193035.1
type: Protein
SIO_000068: ncbiprotein

position:1084928:-1
position: 1084928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1084887-1084928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084523-1084586:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084159-1084320:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1083917-1084041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1083515-1083638:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1081671-1081789:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1081424-1081534:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080180-1080317:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1079639-1079716:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1079302-1079411:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1077897-1078053:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1077034-1077186:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1076577-1076650:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1074767-1074907:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1074369-1074510:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1073887-1074006:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1072564-1072664:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1072033-1072142:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1068853-1069135:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1064794-1065545:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1063786-1063952:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1062788-1062920:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1061935-1062077:-1:exon

pafah1b2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: pafah1b2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1101788..1109917
location: region:1101788-1109917:1
so has part: feature:1101788-1109917:1:exon
subclass of: SO_0000010

102690511
type: Gene
SIO_000068: ncbigene