Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG22, LepOcu1, whole genome shotgun sequence.
type: Entry
definition: Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG22, LepOcu1, whole genome shotgun sequence.
sequence version: NC_023200.1
sequence date: 2016-01-08
sequence: sequence
division: CON
label: NC_023200.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA221149
dblink: SAMN00706774
keyword: WGS
keyword: RefSeq
source: Lepisosteus oculatus (spotted gar)
organism: Lepisosteus oculatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM001425.1.\nAssembly name: LepOcu1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Broad Institute on\n2012/01/13. The original whole-genome shotgun project has the\naccession AHAT00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Broad Institute\nAssembly Method :: AllPaths v. R38293\nAssembly Name :: LepOcu1\nGenome Coverage :: 677.5x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Lepisosteus oculatus Annotation\n Release 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 6.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000018
sequence length: 11620783
topology: linear
so has quality: SO_0000987
location: 1..11620783
location: region:1-11620783:1
RO_0002162: 7918

NC_023200
type: RefSeq
SIO_000068: refseq

PRJNA221149
type: BioProject
SIO_000068: bioproject

SAMN00706774
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11620783:1
position: 11620783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-11620783:1:source
so part of: sequence
organism: Lepisosteus oculatus
mol type: genomic DNA
isolate: Spotted Gar 1
sex: female
country: USA: Bayou Chevreuil, St. James Parish, Louisiana
lat lon: 29.91 N 90.80 W
linkage group: LG22

7918
type: Taxonomy
SIO_000068: taxonomy

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 7918
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 10781615..10781714
location: region:10781615-10781714:1
so has part: feature:10781615-10781714:1:region

position:10781615:1
position: 10781615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10781714:1
position: 10781714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10781615-10781714:1:region

LOC107079931
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079931
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7..5591
location: region:7-5591:1
so has part: feature:7-5591:1:exon
subclass of: SO_0000011

107079931
type: Gene
SIO_000068: ncbigene

position:7:1
position: 7
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5591:1
position: 5591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7-5591:1:exon

LOC107079931
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107079931
product: uncharacterized LOC107079931
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_001480827.1
SIO_010081: LOC107079931
subclass of: SO_0000673
so part of: LOC107079931
location: join(7..111,2118..2341,5300..5591)
location: region:7-5591:1
so has part: feature:7-111:1:exon
so has part: feature:2118-2341:1:exon
so has part: feature:5300-5591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7-111:1:exon

position:111:1
position: 111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2118-2341:1:exon

position:2118:1
position: 2118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2341:1
position: 2341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5300-5591:1:exon

position:5300:1
position: 5300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

poldip2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: poldip2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2281..30517)
location: region:2281-30517:-1
so has part: feature:2281-30517:-1:exon
subclass of: SO_0000010

102684489
type: Gene
SIO_000068: ncbigene

position:2281:-1
position: 2281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30517:-1
position: 30517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2281-30517:-1:exon

poldip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: poldip2
product: polymerase (DNA-directed), delta interacting protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015367525.1
SIO_010081: poldip2
subclass of: SO_0000673
so part of: poldip2
location: complement(join(2281..2363,15259..15338,16586..16711,17931..17957,18405..18541,19399..19506,20059..20134,21526..21625,22292..22389,22679..22760,24993..25316))
location: region:2281-25316:-1
so has part: feature:24993-25316:-1:exon
so has part: feature:22679-22760:-1:exon
so has part: feature:22292-22389:-1:exon
so has part: feature:21526-21625:-1:exon
so has part: feature:20059-20134:-1:exon
so has part: feature:19399-19506:-1:exon
so has part: feature:18405-18541:-1:exon
so has part: feature:17931-17957:-1:exon
so has part: feature:16586-16711:-1:exon
so has part: feature:15259-15338:-1:exon
so has part: feature:2281-2363:-1:exon

position:25316:-1
position: 25316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24993-25316:-1:exon

position:24993:-1
position: 24993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22679-22760:-1:exon

position:22679:-1
position: 22679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22760:-1
position: 22760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22292-22389:-1:exon

position:22292:-1
position: 22292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22389:-1
position: 22389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:21526-21625:-1:exon

position:21526:-1
position: 21526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21625:-1
position: 21625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:20059-20134:-1:exon

position:20059:-1
position: 20059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20134:-1
position: 20134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:19399-19506:-1:exon

position:19399:-1
position: 19399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19506:-1
position: 19506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:18405-18541:-1:exon

position:18405:-1
position: 18405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18541:-1
position: 18541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:17931-17957:-1:exon

position:17931:-1
position: 17931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17957:-1
position: 17957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:16586-16711:-1:exon

position:16586:-1
position: 16586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16711:-1
position: 16711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:15259-15338:-1:exon

position:15259:-1
position: 15259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15338:-1
position: 15338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2281-2363:-1:exon

position:2363:-1
position: 2363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

poldip2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: poldip2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polymerase delta-interacting protein 2 isoform X4
translation: MAACVLRRGLLSSVAKYNKKHTIRVLSFEYSSKHEVNKFRLPCSTCSLFSTQQARFLSSRNRPEGKVLETVGVFEAPKQHGKYETGQLFLHSVFGYRGIVLFPWHARLYDRDVTPPATESKPETPGNHGSKEVKGKTHTYYQVLIDTRDCPHISQRSQTEAVTFLANHDDSRALYAIPGLDYVSHEDILPYSSTDQIPIQHELFERFLMYNPSKSPPFIARDTLRAWQEKNHPWLELSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLGNEVVQLRERHWRIFSLSGTLETVRGRGVVGREPVLSKDQPAFQYSSHVSLQAPSGHM
SIO_010081: poldip2
subclass of: SO_0000673
so part of: poldip2
location: complement(join(2363,15259..15338,16586..16711,17931..17957,18405..18541,19399..19506,20059..20134,21526..21625,22292..22389,22679..22760,24993..25171))
location: region:2363-25171:-1
so has part: feature:24993-25171:-1:exon
so has part: feature:22679-22760:-1:exon
so has part: feature:22292-22389:-1:exon
so has part: feature:21526-21625:-1:exon
so has part: feature:20059-20134:-1:exon
so has part: feature:19399-19506:-1:exon
so has part: feature:18405-18541:-1:exon
so has part: feature:17931-17957:-1:exon
so has part: feature:16586-16711:-1:exon
so has part: feature:15259-15338:-1:exon
so has part: feature:2363-2363:-1:exon

XP_015223011.1
type: Protein
SIO_000068: ncbiprotein

position:25171:-1
position: 25171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24993-25171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22679-22760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22292-22389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21526-21625:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20059-20134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19399-19506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18405-18541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17931-17957:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16586-16711:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15259-15338:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2363-2363:-1:exon

poldip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: poldip2
product: polymerase (DNA-directed), delta interacting protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006640789.2
SIO_010081: poldip2
subclass of: SO_0000673
so part of: poldip2
location: complement(join(3068..5741,15259..15338,16586..16711,17931..17957,18405..18541,19399..19506,20059..20134,21526..21625,22292..22389,22679..22760,24993..25315))
location: region:3068-25315:-1
so has part: feature:24993-25315:-1:exon
so has part: feature:22679-22760:-1:exon
so has part: feature:22292-22389:-1:exon
so has part: feature:21526-21625:-1:exon
so has part: feature:20059-20134:-1:exon
so has part: feature:19399-19506:-1:exon
so has part: feature:18405-18541:-1:exon
so has part: feature:17931-17957:-1:exon
so has part: feature:16586-16711:-1:exon
so has part: feature:15259-15338:-1:exon
so has part: feature:3068-5741:-1:exon

position:3068:-1
position: 3068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25315:-1
position: 25315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24993-25315:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22679-22760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22292-22389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21526-21625:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20059-20134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19399-19506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18405-18541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17931-17957:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16586-16711:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15259-15338:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3068-5741:-1:exon

position:5741:-1
position: 5741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

poldip2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: poldip2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polymerase delta-interacting protein 2 isoform X2
translation: MAACVLRRGLLSSVAKYNKKHTIRVLSFEYSSKHEVNKFRLPCSTCSLFSTQQARFLSSRNRPEGKVLETVGVFEAPKQHGKYETGQLFLHSVFGYRGIVLFPWHARLYDRDVTPPATESKPETPGNHGSKEVKGKTHTYYQVLIDTRDCPHISQRSQTEAVTFLANHDDSRALYAIPGLDYVSHEDILPYSSTDQIPIQHELFERFLMYNPSKSPPFIARDTLRAWQEKNHPWLELSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLGNEVVQLRERHWRIFSLSGTLETVRGRGVVGREPVLSKDQPAFQYSSHVSLQAPSGHMWGTFRIERTDGSNFDVRIPPFSLESNKDDKAPPAGYSW
SIO_010081: poldip2
subclass of: SO_0000673
so part of: poldip2
location: complement(join(5627..5741,15259..15338,16586..16711,17931..17957,18405..18541,19399..19506,20059..20134,21526..21625,22292..22389,22679..22760,24993..25171))
location: region:5627-25171:-1
so has part: feature:24993-25171:-1:exon
so has part: feature:22679-22760:-1:exon
so has part: feature:22292-22389:-1:exon
so has part: feature:21526-21625:-1:exon
so has part: feature:20059-20134:-1:exon
so has part: feature:19399-19506:-1:exon
so has part: feature:18405-18541:-1:exon
so has part: feature:17931-17957:-1:exon
so has part: feature:16586-16711:-1:exon
so has part: feature:15259-15338:-1:exon
so has part: feature:5627-5741:-1:exon

XP_006640852.1
type: Protein
SIO_000068: ncbiprotein

position:5627:-1
position: 5627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24993-25171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22679-22760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22292-22389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21526-21625:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20059-20134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19399-19506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18405-18541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17931-17957:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16586-16711:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15259-15338:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5627-5741:-1:exon

poldip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: poldip2
product: polymerase (DNA-directed), delta interacting protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_015367524.1
SIO_010081: poldip2
subclass of: SO_0000673
so part of: poldip2
location: complement(join(9462..10843,15259..15338,16586..16711,17931..17957,18405..18541,19399..19506,20059..20134,21526..21625,22292..22389,22679..22760,30158..30517))
location: region:9462-30517:-1
so has part: feature:30158-30517:-1:exon
so has part: feature:22679-22760:-1:exon
so has part: feature:22292-22389:-1:exon
so has part: feature:21526-21625:-1:exon
so has part: feature:20059-20134:-1:exon
so has part: feature:19399-19506:-1:exon
so has part: feature:18405-18541:-1:exon
so has part: feature:17931-17957:-1:exon
so has part: feature:16586-16711:-1:exon
so has part: feature:15259-15338:-1:exon
so has part: feature:9462-10843:-1:exon

position:9462:-1
position: 9462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30158-30517:-1:exon

position:30158:-1
position: 30158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22679-22760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22292-22389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21526-21625:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20059-20134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19399-19506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18405-18541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17931-17957:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16586-16711:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15259-15338:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9462-10843:-1:exon

position:10843:-1
position: 10843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

poldip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: poldip2
product: polymerase (DNA-directed), delta interacting protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015367523.1
SIO_010081: poldip2
subclass of: SO_0000673
so part of: poldip2
location: complement(join(9462..10843,15259..15338,16586..16711,17931..17957,18405..18541,19399..19506,20059..20134,21526..21625,22292..22389,22679..22760,24993..25319))
location: region:9462-25319:-1
so has part: feature:24993-25319:-1:exon
so has part: feature:22679-22760:-1:exon
so has part: feature:22292-22389:-1:exon
so has part: feature:21526-21625:-1:exon
so has part: feature:20059-20134:-1:exon
so has part: feature:19399-19506:-1:exon
so has part: feature:18405-18541:-1:exon
so has part: feature:17931-17957:-1:exon
so has part: feature:16586-16711:-1:exon
so has part: feature:15259-15338:-1:exon
so has part: feature:9462-10843:-1:exon

position:25319:-1
position: 25319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24993-25319:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22679-22760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22292-22389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21526-21625:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20059-20134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19399-19506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18405-18541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17931-17957:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16586-16711:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15259-15338:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9462-10843:-1:exon

poldip2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: poldip2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polymerase delta-interacting protein 2 isoform X3
translation: MGDLKGIGAQPWFQGTAMLNRPEGKVLETVGVFEAPKQHGKYETGQLFLHSVFGYRGIVLFPWHARLYDRDVTPPATESKPETPGNHGSKEVKGKTHTYYQVLIDTRDCPHISQRSQTEAVTFLANHDDSRALYAIPGLDYVSHEDILPYSSTDQIPIQHELFERFLMYNPSKSPPFIARDTLRAWQEKNHPWLELSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLGNEVVQLRERHWRIFSLSGTLETVRGRGVVGREPVLSKDQPAFQYSSHVSLQAPSGHMWGSYRFERANGTFFDVRIPPFSLESKKDDSPNGFLPGPFATLA
SIO_010081: poldip2
subclass of: SO_0000673
so part of: poldip2
location: complement(join(10714..10843,15259..15338,16586..16711,17931..17957,18405..18541,19399..19506,20059..20134,21526..21625,22292..22389,22679..22760,30158..30213))
location: region:10714-30213:-1
so has part: feature:30158-30213:-1:exon
so has part: feature:22679-22760:-1:exon
so has part: feature:22292-22389:-1:exon
so has part: feature:21526-21625:-1:exon
so has part: feature:20059-20134:-1:exon
so has part: feature:19399-19506:-1:exon
so has part: feature:18405-18541:-1:exon
so has part: feature:17931-17957:-1:exon
so has part: feature:16586-16711:-1:exon
so has part: feature:15259-15338:-1:exon
so has part: feature:10714-10843:-1:exon

XP_015223010.1
type: Protein
SIO_000068: ncbiprotein

position:10714:-1
position: 10714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30213:-1
position: 30213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30158-30213:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22679-22760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22292-22389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21526-21625:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20059-20134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19399-19506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18405-18541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17931-17957:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16586-16711:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15259-15338:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10714-10843:-1:exon

poldip2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: poldip2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polymerase delta-interacting protein 2 isoform X1
translation: MAACVLRRGLLSSVAKYNKKHTIRVLSFEYSSKHEVNKFRLPCSTCSLFSTQQARFLSSRNRPEGKVLETVGVFEAPKQHGKYETGQLFLHSVFGYRGIVLFPWHARLYDRDVTPPATESKPETPGNHGSKEVKGKTHTYYQVLIDTRDCPHISQRSQTEAVTFLANHDDSRALYAIPGLDYVSHEDILPYSSTDQIPIQHELFERFLMYNPSKSPPFIARDTLRAWQEKNHPWLELSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLGNEVVQLRERHWRIFSLSGTLETVRGRGVVGREPVLSKDQPAFQYSSHVSLQAPSGHMWGSYRFERANGTFFDVRIPPFSLESKKDDSPNGFLPGPFATLA
SIO_010081: poldip2
subclass of: SO_0000673
so part of: poldip2
location: complement(join(10714..10843,15259..15338,16586..16711,17931..17957,18405..18541,19399..19506,20059..20134,21526..21625,22292..22389,22679..22760,24993..25171))
location: region:10714-25171:-1
so has part: feature:24993-25171:-1:exon
so has part: feature:22679-22760:-1:exon
so has part: feature:22292-22389:-1:exon
so has part: feature:21526-21625:-1:exon
so has part: feature:20059-20134:-1:exon
so has part: feature:19399-19506:-1:exon
so has part: feature:18405-18541:-1:exon
so has part: feature:17931-17957:-1:exon
so has part: feature:16586-16711:-1:exon
so has part: feature:15259-15338:-1:exon
so has part: feature:10714-10843:-1:exon

XP_015223009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24993-25171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22679-22760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22292-22389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21526-21625:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20059-20134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19399-19506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18405-18541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17931-17957:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16586-16711:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15259-15338:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10714-10843:-1:exon

poldip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: poldip2
product: polymerase (DNA-directed), delta interacting protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015367526.1
SIO_010081: poldip2
subclass of: SO_0000673
so part of: poldip2
location: complement(join(11196..11219,15259..15338,16586..16711,17931..17957,18405..18541,19399..19506,20059..20134,21526..21625,22292..22389,22679..22760,24993..25316))
location: region:11196-25316:-1
so has part: feature:24993-25316:-1:exon
so has part: feature:22679-22760:-1:exon
so has part: feature:22292-22389:-1:exon
so has part: feature:21526-21625:-1:exon
so has part: feature:20059-20134:-1:exon
so has part: feature:19399-19506:-1:exon
so has part: feature:18405-18541:-1:exon
so has part: feature:17931-17957:-1:exon
so has part: feature:16586-16711:-1:exon
so has part: feature:15259-15338:-1:exon
so has part: feature:11196-11219:-1:exon

position:11196:-1
position: 11196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24993-25316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22679-22760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22292-22389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21526-21625:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20059-20134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19399-19506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18405-18541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17931-17957:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16586-16711:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15259-15338:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11196-11219:-1:exon

position:11219:-1
position: 11219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

poldip2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: poldip2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polymerase delta-interacting protein 2 isoform X5
translation: MAACVLRRGLLSSVAKYNKKHTIRVLSFEYSSKHEVNKFRLPCSTCSLFSTQQARFLSSRNRPEGKVLETVGVFEAPKQHGKYETGQLFLHSVFGYRGIVLFPWHARLYDRDVTPPATESKPETPGNHGSKEVKGKTHTYYQVLIDTRDCPHISQRSQTEAVTFLANHDDSRALYAIPGLDYVSHEDILPYSSTDQIPIQHELFERFLMYNPSKSPPFIARDTLRAWQEKNHPWLELSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLGNEVVQLRERHWRIFSLSGTLETVRGRGVVGREPVLSKDQPAFQYSSHVSLQAPSGHM
SIO_010081: poldip2
subclass of: SO_0000673
so part of: poldip2
location: complement(join(11219,15259..15338,16586..16711,17931..17957,18405..18541,19399..19506,20059..20134,21526..21625,22292..22389,22679..22760,24993..25171))
location: region:11219-25171:-1
so has part: feature:24993-25171:-1:exon
so has part: feature:22679-22760:-1:exon
so has part: feature:22292-22389:-1:exon
so has part: feature:21526-21625:-1:exon
so has part: feature:20059-20134:-1:exon
so has part: feature:19399-19506:-1:exon
so has part: feature:18405-18541:-1:exon
so has part: feature:17931-17957:-1:exon
so has part: feature:16586-16711:-1:exon
so has part: feature:15259-15338:-1:exon
so has part: feature:11219-11219:-1:exon

XP_015223012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24993-25171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22679-22760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22292-22389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21526-21625:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20059-20134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19399-19506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18405-18541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17931-17957:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16586-16711:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15259-15338:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11219-11219:-1:exon

tmem199
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: tmem199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 25560..29355
location: region:25560-29355:1
so has part: feature:25560-29355:1:exon
subclass of: SO_0000010

102684819
type: Gene
SIO_000068: ncbigene

position:25560:1
position: 25560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29355:1
position: 29355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25560-29355:1:exon

tmem199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: tmem199
product: transmembrane protein 199
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006640791.2
SIO_010081: tmem199
subclass of: SO_0000673
so part of: tmem199
location: join(25560..26104,26603..26676,27158..27247,27732..27774,28273..28385,29022..29355)
location: region:25560-29355:1
so has part: feature:25560-26104:1:exon
so has part: feature:26603-26676:1:exon
so has part: feature:27158-27247:1:exon
so has part: feature:27732-27774:1:exon
so has part: feature:28273-28385:1:exon
so has part: feature:29022-29355:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25560-26104:1:exon

position:26104:1
position: 26104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26603-26676:1:exon

position:26603:1
position: 26603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26676:1
position: 26676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27158-27247:1:exon

position:27158:1
position: 27158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27247:1
position: 27247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:27732-27774:1:exon

position:27732:1
position: 27732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27774:1
position: 27774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:28273-28385:1:exon

position:28273:1
position: 28273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28385:1
position: 28385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:29022-29355:1:exon

position:29022:1
position: 29022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmem199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: tmem199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 199
translation: MASSFVVGEQSRLKIRDLMKKEKYLPVDLQAELESCLGQGRQATVSFTVARRLQRCLRDRGTLVYLHELFEDSEVYLPEIQKPPRNPELVARLEKMKAKLANEEYLRITRNVNCQELNRQGSLADFGRQVRSMKTVVVTIFNFLVTVVAAFACTYLGSQYIFTETAARVLSAVIAASVVGLAELYVLVRTMEGEMGEL
SIO_010081: tmem199
subclass of: SO_0000673
so part of: tmem199
location: join(25924..26104,26603..26676,27158..27247,27732..27774,28273..28385,29022..29117)
location: region:25924-29117:1
so has part: feature:25924-26104:1:exon
so has part: feature:26603-26676:1:exon
so has part: feature:27158-27247:1:exon
so has part: feature:27732-27774:1:exon
so has part: feature:28273-28385:1:exon
so has part: feature:29022-29117:1:exon

XP_006640854.1
type: Protein
SIO_000068: ncbiprotein

position:25924:1
position: 25924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29117:1
position: 29117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25924-26104:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26603-26676:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27158-27247:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27732-27774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28273-28385:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:29022-29117:1:exon

sebox
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: sebox
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(30639..36253)
location: region:30639-36253:-1
so has part: feature:30639-36253:-1:exon
subclass of: SO_0000010

102693458
type: Gene
SIO_000068: ncbigene

position:30639:-1
position: 30639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36253:-1
position: 36253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30639-36253:-1:exon

sebox
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: sebox
product: SEBOX homeobox
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_006640929.2
SIO_010081: sebox
subclass of: SO_0000673
so part of: sebox
location: complement(join(30639..32939,33969..34177,34503..36253))
location: region:30639-36253:-1
so has part: feature:34503-36253:-1:exon
so has part: feature:33969-34177:-1:exon
so has part: feature:30639-32939:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34503-36253:-1:exon

position:34503:-1
position: 34503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33969-34177:-1:exon

position:33969:-1
position: 33969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34177:-1
position: 34177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:30639-32939:-1:exon

position:32939:-1
position: 32939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sebox
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: sebox
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein SEBOX
translation: MAQFMGPVFFSSRKPTKDKNMDFNLLHKDKKQQSANSRSEAMGSSPELDSSLGGVAEGQRKRKRTIFSRAQLSELEEAFASTPYPDITLRERLAEYTHLPESKIQVWFQNRRARSIKSGKLIRPLKKSGNANRLIPSPFSPVITPPLLGEAGSRAVDHSQAEMSHRQHPDCPRPLKSQQYNNWQALSQPPLQHQPQHPDFHLSLDLPDLLHWDDCHLSQLLTGTEGVQDQPAPSTQWGDFNQLYKAPSYSCIKPQQGPHVMHPVMDPHAAQVPVDQVVPSHPQQFYWDVPQGQDPNSSAQQTSLSYISDLIYNAAIVTNLVDF
SIO_010081: sebox
subclass of: SO_0000673
so part of: sebox
location: complement(join(32283..32939,33969..34177,34503..34608))
location: region:32283-34608:-1
so has part: feature:34503-34608:-1:exon
so has part: feature:33969-34177:-1:exon
so has part: feature:32283-32939:-1:exon

XP_006640992.2
type: Protein
SIO_000068: ncbiprotein

position:32283:-1
position: 32283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34608:-1
position: 34608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34503-34608:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33969-34177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32283-32939:-1:exon

nle1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: nle1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(38609..47206)
location: region:38609-47206:-1
so has part: feature:38609-47206:-1:exon
subclass of: SO_0000010

102693653
type: Gene
SIO_000068: ncbigene

position:38609:-1
position: 38609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47206:-1
position: 47206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38609-47206:-1:exon

nle1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: nle1
product: notchless homolog 1 (Drosophila)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006640930.2
SIO_010081: nle1
subclass of: SO_0000673
so part of: nle1
location: complement(join(38609..40322,40416..40486,40769..40928,41583..41785,42151..42197,42610..42745,43366..43558,43903..44000,44235..44311,45194..45273,45821..46038,46400..46541,47004..47206))
location: region:38609-47206:-1
so has part: feature:47004-47206:-1:exon
so has part: feature:46400-46541:-1:exon
so has part: feature:45821-46038:-1:exon
so has part: feature:45194-45273:-1:exon
so has part: feature:44235-44311:-1:exon
so has part: feature:43903-44000:-1:exon
so has part: feature:43366-43558:-1:exon
so has part: feature:42610-42745:-1:exon
so has part: feature:42151-42197:-1:exon
so has part: feature:41583-41785:-1:exon
so has part: feature:40769-40928:-1:exon
so has part: feature:40416-40486:-1:exon
so has part: feature:38609-40322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47004-47206:-1:exon

position:47004:-1
position: 47004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:46400-46541:-1:exon

position:46400:-1
position: 46400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46541:-1
position: 46541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:45821-46038:-1:exon

position:45821:-1
position: 45821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46038:-1
position: 46038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:45194-45273:-1:exon

position:45194:-1
position: 45194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45273:-1
position: 45273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:44235-44311:-1:exon

position:44235:-1
position: 44235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44311:-1
position: 44311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:43903-44000:-1:exon

position:43903:-1
position: 43903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44000:-1
position: 44000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:43366-43558:-1:exon

position:43366:-1
position: 43366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43558:-1
position: 43558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:42610-42745:-1:exon

position:42610:-1
position: 42610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42745:-1
position: 42745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:42151-42197:-1:exon

position:42151:-1
position: 42151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42197:-1
position: 42197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:41583-41785:-1:exon

position:41583:-1
position: 41583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41785:-1
position: 41785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:40769-40928:-1:exon

position:40769:-1
position: 40769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40928:-1
position: 40928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:40416-40486:-1:exon

position:40416:-1
position: 40416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40486:-1
position: 40486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:38609-40322:-1:exon

position:40322:-1
position: 40322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nle1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: nle1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: notchless protein homolog 1
translation: MSGDNERLLIQFKDESGEILGSPFDVPVDITPDKLQLVCNALLQKEEPLPLAFYVNETEIVSSLASCLAGQAVETEQVLDVVYQPQAVFRVRAVTRCTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLTTETPHFTARGHKHWVLAISWSPDGKKLASGCKNSQIFMWDPCSGQQVGKVLTGHTKWITWLSWEPLHLNAECRYLASSSKDCTVRIWDTVLGRCDKILTGHTQSVTCVKWGGDGLLFTSSQDRTIKVWRAQDGVQCRTLLGHAHWVNTLALSTDYVLRTGAFEPADAKINPQDVSGPLEELKEKALKRYNQIRGQGPERLVSGSDDFTLFLWNPAEDKKPVGRLTGHQALINEVLFSPDTRLIASASFDKSIKIWDGKTGKYLQSLRGHVSAVYQISWSADSRLLVSGSSDSTLKVWDVKASRLVADLPGHADEVFAVDWSPDGQRVASGGKDKCLRIWRR
SIO_010081: nle1
subclass of: SO_0000673
so part of: nle1
location: complement(join(40310..40322,40416..40486,40769..40928,41583..41785,42151..42197,42610..42745,43366..43558,43903..44000,44235..44311,45194..45273,45821..46038,46400..46534))
location: region:40310-46534:-1
so has part: feature:46400-46534:-1:exon
so has part: feature:45821-46038:-1:exon
so has part: feature:45194-45273:-1:exon
so has part: feature:44235-44311:-1:exon
so has part: feature:43903-44000:-1:exon
so has part: feature:43366-43558:-1:exon
so has part: feature:42610-42745:-1:exon
so has part: feature:42151-42197:-1:exon
so has part: feature:41583-41785:-1:exon
so has part: feature:40769-40928:-1:exon
so has part: feature:40416-40486:-1:exon
so has part: feature:40310-40322:-1:exon

XP_006640993.1
type: Protein
SIO_000068: ncbiprotein

position:40310:-1
position: 40310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46534:-1
position: 46534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46400-46534:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45821-46038:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45194-45273:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44235-44311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43903-44000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43366-43558:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:42610-42745:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42151-42197:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:41583-41785:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:40769-40928:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:40416-40486:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:40310-40322:-1:exon

inpp5k
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: inpp5k
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(49242..67670)
location: region:49242-67670:-1
so has part: feature:49242-67670:-1:exon
subclass of: SO_0000010

102693853
type: Gene
SIO_000068: ncbigene

position:49242:-1
position: 49242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67670:-1
position: 67670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49242-67670:-1:exon

inpp5k
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: inpp5k
product: inositol polyphosphate-5-phosphatase K, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015367801.1
SIO_010081: inpp5k
subclass of: SO_0000673
so part of: inpp5k
location: complement(join(49242..50721,51150..51254,51777..51860,52402..52539,53382..53631,54701..54727,56610..56719,57077..57188,57431..57606,58236..58352,59881..59989,60911..61015,65814..65910,67541..67670))
location: region:49242-67670:-1
so has part: feature:67541-67670:-1:exon
so has part: feature:65814-65910:-1:exon
so has part: feature:60911-61015:-1:exon
so has part: feature:59881-59989:-1:exon
so has part: feature:58236-58352:-1:exon
so has part: feature:57431-57606:-1:exon
so has part: feature:57077-57188:-1:exon
so has part: feature:56610-56719:-1:exon
so has part: feature:54701-54727:-1:exon
so has part: feature:53382-53631:-1:exon
so has part: feature:52402-52539:-1:exon
so has part: feature:51777-51860:-1:exon
so has part: feature:51150-51254:-1:exon
so has part: feature:49242-50721:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67541-67670:-1:exon

position:67541:-1
position: 67541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65814-65910:-1:exon

position:65814:-1
position: 65814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65910:-1
position: 65910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:60911-61015:-1:exon

position:60911:-1
position: 60911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61015:-1
position: 61015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:59881-59989:-1:exon

position:59881:-1
position: 59881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59989:-1
position: 59989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:58236-58352:-1:exon

position:58236:-1
position: 58236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58352:-1
position: 58352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:57431-57606:-1:exon

position:57431:-1
position: 57431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57606:-1
position: 57606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:57077-57188:-1:exon

position:57077:-1
position: 57077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57188:-1
position: 57188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:56610-56719:-1:exon

position:56610:-1
position: 56610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56719:-1
position: 56719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:54701-54727:-1:exon

position:54701:-1
position: 54701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54727:-1
position: 54727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:53382-53631:-1:exon

position:53382:-1
position: 53382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53631:-1
position: 53631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:52402-52539:-1:exon

position:52402:-1
position: 52402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52539:-1
position: 52539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:51777-51860:-1:exon

position:51777:-1
position: 51777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51860:-1
position: 51860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:51150-51254:-1:exon

position:51150:-1
position: 51150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51254:-1
position: 51254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:49242-50721:-1:exon

position:50721:-1
position: 50721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

inpp5k
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: inpp5k
product: inositol polyphosphate-5-phosphatase K, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015367803.1
SIO_010081: inpp5k
subclass of: SO_0000673
so part of: inpp5k
location: complement(join(49242..50721,51150..51254,51777..51860,52402..52539,53382..53631,54701..54727,56610..56719,57077..57188,57431..57606,58236..58352,59881..59989,60911..61015,65814..65910,66972..67457))
location: region:49242-67457:-1
so has part: feature:66972-67457:-1:exon
so has part: feature:65814-65910:-1:exon
so has part: feature:60911-61015:-1:exon
so has part: feature:59881-59989:-1:exon
so has part: feature:58236-58352:-1:exon
so has part: feature:57431-57606:-1:exon
so has part: feature:57077-57188:-1:exon
so has part: feature:56610-56719:-1:exon
so has part: feature:54701-54727:-1:exon
so has part: feature:53382-53631:-1:exon
so has part: feature:52402-52539:-1:exon
so has part: feature:51777-51860:-1:exon
so has part: feature:51150-51254:-1:exon
so has part: feature:49242-50721:-1:exon

position:67457:-1
position: 67457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66972-67457:-1:exon

position:66972:-1
position: 66972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65814-65910:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60911-61015:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59881-59989:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58236-58352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57431-57606:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57077-57188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56610-56719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54701-54727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:53382-53631:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:52402-52539:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:51777-51860:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:51150-51254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:49242-50721:-1:exon

inpp5k
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: inpp5k
product: inositol polyphosphate-5-phosphatase K, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_006640931.2
SIO_010081: inpp5k
subclass of: SO_0000673
so part of: inpp5k
location: complement(join(49242..50721,51150..51254,51777..51860,52402..52539,53382..53631,54701..54727,56610..56719,57077..57188,57431..57606,58236..58352,59881..59989,60911..61015,61488..62542))
location: region:49242-62542:-1
so has part: feature:61488-62542:-1:exon
so has part: feature:60911-61015:-1:exon
so has part: feature:59881-59989:-1:exon
so has part: feature:58236-58352:-1:exon
so has part: feature:57431-57606:-1:exon
so has part: feature:57077-57188:-1:exon
so has part: feature:56610-56719:-1:exon
so has part: feature:54701-54727:-1:exon
so has part: feature:53382-53631:-1:exon
so has part: feature:52402-52539:-1:exon
so has part: feature:51777-51860:-1:exon
so has part: feature:51150-51254:-1:exon
so has part: feature:49242-50721:-1:exon

position:62542:-1
position: 62542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61488-62542:-1:exon

position:61488:-1
position: 61488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:60911-61015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59881-59989:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58236-58352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:57431-57606:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57077-57188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:56610-56719:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:54701-54727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:53382-53631:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:52402-52539:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:51777-51860:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:51150-51254:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:49242-50721:-1:exon

inpp5k
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: inpp5k
product: inositol polyphosphate-5-phosphatase K, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015367802.1
SIO_010081: inpp5k
subclass of: SO_0000673
so part of: inpp5k
location: complement(join(49242..50721,51150..51254,51777..51860,52402..52539,53382..53631,56610..56719,57077..57188,57431..57606,58236..58352,59881..59989,60911..61015,61488..62524))
location: region:49242-62524:-1
so has part: feature:61488-62524:-1:exon
so has part: feature:60911-61015:-1:exon
so has part: feature:59881-59989:-1:exon
so has part: feature:58236-58352:-1:exon
so has part: feature:57431-57606:-1:exon
so has part: feature:57077-57188:-1:exon
so has part: feature:56610-56719:-1:exon
so has part: feature:53382-53631:-1:exon
so has part: feature:52402-52539:-1:exon
so has part: feature:51777-51860:-1:exon
so has part: feature:51150-51254:-1:exon
so has part: feature:49242-50721:-1:exon

position:62524:-1
position: 62524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61488-62524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60911-61015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59881-59989:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58236-58352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:57431-57606:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57077-57188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:56610-56719:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:53382-53631:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:52402-52539:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:51777-51860:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:51150-51254:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:49242-50721:-1:exon

inpp5k
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: inpp5k
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 5-phosphatase K isoform X2
translation: MPHSGWQQAPGHSVGTADAPVCFSDSVTGVAGSLLPHGSRMHLSPTSETQNSLFQAKISSKTSAKMDTFRLHMVTWNVGTAAPPSDVSSLLELDSEKPADLFVIGLQEVNSRLLNFINDMTFEDPWSRLLMDTLAPLGYVKLISIRMQGLLLLLFAKQAHITFIRDIQASYTRTGIYGYWGNKGGVSVRMSFYGHLICFLNCHLMAHMENASQRVDEIEHILETHAFDTDNVPNILDHKVVFWFGDLNFRIADHGMHFMREAINNKRFHLLWEKDQLNMAKKKEAFLREFQEGPLRFKPTYKYDLHSETYDTREQKTWLGFNGKKRKPAWTDRILWRVMSSDQDAAEEAETNVKGEEQEEEWKGEEQTQVKELVSPVKVTLDSYTSHMSYGISDHKPVTGTFILELKKMFQTPLVQLCAEGEWSADQDALITYSILEPFPSSTWDWIGLYKVGFRSYSDYVTYVWVKDDEVLYNEEAVQVYVGMNEIPVLGGEFLLCYYSSNLQCIIGISAPFQIHESKVAIEEGLASENIGGLENATSLNSNQDF
SIO_010081: inpp5k
subclass of: SO_0000673
so part of: inpp5k
location: complement(join(50623..50721,51150..51254,51777..51860,52402..52539,53382..53631,54701..54727,56610..56719,57077..57188,57431..57606,58236..58352,59881..59989,60911..61015,65814..65910,67541..67652))
location: region:50623-67652:-1
so has part: feature:67541-67652:-1:exon
so has part: feature:65814-65910:-1:exon
so has part: feature:60911-61015:-1:exon
so has part: feature:59881-59989:-1:exon
so has part: feature:58236-58352:-1:exon
so has part: feature:57431-57606:-1:exon
so has part: feature:57077-57188:-1:exon
so has part: feature:56610-56719:-1:exon
so has part: feature:54701-54727:-1:exon
so has part: feature:53382-53631:-1:exon
so has part: feature:52402-52539:-1:exon
so has part: feature:51777-51860:-1:exon
so has part: feature:51150-51254:-1:exon
so has part: feature:50623-50721:-1:exon

XP_015223287.1
type: Protein
SIO_000068: ncbiprotein

position:50623:-1
position: 50623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67652:-1
position: 67652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67541-67652:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65814-65910:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60911-61015:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59881-59989:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58236-58352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57431-57606:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57077-57188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56610-56719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54701-54727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:53382-53631:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:52402-52539:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:51777-51860:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:51150-51254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:50623-50721:-1:exon

inpp5k
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: inpp5k
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 5-phosphatase K isoform X4
translation: MHLSPTSETQNSLFQAKISSKTSAKMDTFRLHMVTWNVGTAAPPSDVSSLLELDSEKPADLFVIGLQEVNSRLLNFINDMTFEDPWSRLLMDTLAPLGYVKLISIRMQGLLLLLFAKQAHITFIRDIQASYTRTGIYGYWGNKGGVSVRMSFYGHLICFLNCHLMAHMENASQRVDEIEHILETHAFDTDNVPNILDHKVVFWFGDLNFRIADHGMHFMREAINNKRFHLLWEKDQLNMAKKKEAFLREFQEGPLRFKPTYKYDLHSETYDTREQKTWLGFNGKKRKPAWTDRILWRVMSSDQDAAEEAETNVKGEEQEEEWKGEEQTQVKELVSPVKVTLDSYTSHMSYGISDHKPVTGTFILELKKMFQTPLVQLCAEGEWSADQDALITYSILEPFPSSTWDWIGLYKVGFRSYSDYVTYVWVKDDEVLYNEEAVQVYVGMNEIPVLGGEFLLCYYSSNLQCIIGISAPFQIHESKVAIEEGLASENIGGLENATSLNSNQDF
SIO_010081: inpp5k
subclass of: SO_0000673
so part of: inpp5k
location: complement(join(50623..50721,51150..51254,51777..51860,52402..52539,53382..53631,54701..54727,56610..56719,57077..57188,57431..57606,58236..58352,59881..59989,60911..61015,65814..65902))
location: region:50623-65902:-1
so has part: feature:65814-65902:-1:exon
so has part: feature:60911-61015:-1:exon
so has part: feature:59881-59989:-1:exon
so has part: feature:58236-58352:-1:exon
so has part: feature:57431-57606:-1:exon
so has part: feature:57077-57188:-1:exon
so has part: feature:56610-56719:-1:exon
so has part: feature:54701-54727:-1:exon
so has part: feature:53382-53631:-1:exon
so has part: feature:52402-52539:-1:exon
so has part: feature:51777-51860:-1:exon
so has part: feature:51150-51254:-1:exon
so has part: feature:50623-50721:-1:exon

XP_015223289.1
type: Protein
SIO_000068: ncbiprotein

position:65902:-1
position: 65902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65814-65902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60911-61015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59881-59989:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58236-58352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:57431-57606:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57077-57188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:56610-56719:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:54701-54727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:53382-53631:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:52402-52539:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:51777-51860:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:51150-51254:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:50623-50721:-1:exon

inpp5k
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: inpp5k
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 5-phosphatase K isoform X3
translation: MEDAEGLPGLRARSDSMASTASVSTSGRLLLRQRVVQLMTCVEDLSSDEELQEEVSRTLNEAFLLCGKRGAREEERFRLHMVTWNVGTAAPPSDVSSLLELDSEKPADLFVIGLQEVNSRLLNFINDMTFEDPWSRLLMDTLAPLGYVKLISIRMQGLLLLLFAKQAHITFIRDIQASYTRTGIYGYWGNKGGVSVRMSFYGHLICFLNCHLMAHMENASQRVDEIEHILETHAFDTDNVPNILDHKVVFWFGDLNFRIADHGMHFMREAINNKRFHLLWEKDQLNMAKKKEAFLREFQEGPLRFKPTYKYDLHSETYDTSGKKRKPAWTDRILWRVMSSDQDAAEEAETNVKGEEQEEEWKGEEQTQVKELVSPVKVTLDSYTSHMSYGISDHKPVTGTFILELKKMFQTPLVQLCAEGEWSADQDALITYSILEPFPSSTWDWIGLYKVGFRSYSDYVTYVWVKDDEVLYNEEAVQVYVGMNEIPVLGGEFLLCYYSSNLQCIIGISAPFQIHESKVAIEEGLASENIGGLENATSLNSNQDF
SIO_010081: inpp5k
subclass of: SO_0000673
so part of: inpp5k
location: complement(join(50623..50721,51150..51254,51777..51860,52402..52539,53382..53631,56610..56719,57077..57188,57431..57606,58236..58352,59881..59989,60911..61015,61488..61720))
location: region:50623-61720:-1
so has part: feature:61488-61720:-1:exon
so has part: feature:60911-61015:-1:exon
so has part: feature:59881-59989:-1:exon
so has part: feature:58236-58352:-1:exon
so has part: feature:57431-57606:-1:exon
so has part: feature:57077-57188:-1:exon
so has part: feature:56610-56719:-1:exon
so has part: feature:53382-53631:-1:exon
so has part: feature:52402-52539:-1:exon
so has part: feature:51777-51860:-1:exon
so has part: feature:51150-51254:-1:exon
so has part: feature:50623-50721:-1:exon

XP_015223288.1
type: Protein
SIO_000068: ncbiprotein

position:61720:-1
position: 61720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61488-61720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60911-61015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59881-59989:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58236-58352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:57431-57606:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57077-57188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:56610-56719:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:53382-53631:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:52402-52539:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:51777-51860:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:51150-51254:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:50623-50721:-1:exon

inpp5k
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: inpp5k
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 5-phosphatase K isoform X1
translation: MEDAEGLPGLRARSDSMASTASVSTSGRLLLRQRVVQLMTCVEDLSSDEELQEEVSRTLNEAFLLCGKRGAREEERFRLHMVTWNVGTAAPPSDVSSLLELDSEKPADLFVIGLQEVNSRLLNFINDMTFEDPWSRLLMDTLAPLGYVKLISIRMQGLLLLLFAKQAHITFIRDIQASYTRTGIYGYWGNKGGVSVRMSFYGHLICFLNCHLMAHMENASQRVDEIEHILETHAFDTDNVPNILDHKVVFWFGDLNFRIADHGMHFMREAINNKRFHLLWEKDQLNMAKKKEAFLREFQEGPLRFKPTYKYDLHSETYDTREQKTWLGFNGKKRKPAWTDRILWRVMSSDQDAAEEAETNVKGEEQEEEWKGEEQTQVKELVSPVKVTLDSYTSHMSYGISDHKPVTGTFILELKKMFQTPLVQLCAEGEWSADQDALITYSILEPFPSSTWDWIGLYKVGFRSYSDYVTYVWVKDDEVLYNEEAVQVYVGMNEIPVLGGEFLLCYYSSNLQCIIGISAPFQIHESKVAIEEGLASENIGGLENATSLNSNQDF
SIO_010081: inpp5k
subclass of: SO_0000673
so part of: inpp5k
location: complement(join(50623..50721,51150..51254,51777..51860,52402..52539,53382..53631,54701..54727,56610..56719,57077..57188,57431..57606,58236..58352,59881..59989,60911..61015,61488..61720))
location: region:50623-61720:-1
so has part: feature:61488-61720:-1:exon
so has part: feature:60911-61015:-1:exon
so has part: feature:59881-59989:-1:exon
so has part: feature:58236-58352:-1:exon
so has part: feature:57431-57606:-1:exon
so has part: feature:57077-57188:-1:exon
so has part: feature:56610-56719:-1:exon
so has part: feature:54701-54727:-1:exon
so has part: feature:53382-53631:-1:exon
so has part: feature:52402-52539:-1:exon
so has part: feature:51777-51860:-1:exon
so has part: feature:51150-51254:-1:exon
so has part: feature:50623-50721:-1:exon

XP_006640994.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61488-61720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60911-61015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59881-59989:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58236-58352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:57431-57606:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57077-57188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:56610-56719:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:54701-54727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:53382-53631:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:52402-52539:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:51777-51860:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:51150-51254:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:50623-50721:-1:exon

eif4h
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: eif4h
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 72152..86581
location: region:72152-86581:1
so has part: feature:72152-86581:1:exon
subclass of: SO_0000010

102685016
type: Gene
SIO_000068: ncbigene

position:72152:1
position: 72152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86581:1
position: 86581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72152-86581:1:exon

eif4h
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: eif4h
product: eukaryotic translation initiation factor 4H, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_015367521.1
SIO_010081: eif4h
subclass of: SO_0000673
so part of: eif4h
location: join(72152..72278,77868..78058,79031..79095,80354..80450,81890..82036,82503..83611)
location: region:72152-83611:1
so has part: feature:72152-72278:1:exon
so has part: feature:77868-78058:1:exon
so has part: feature:79031-79095:1:exon
so has part: feature:80354-80450:1:exon
so has part: feature:81890-82036:1:exon
so has part: feature:82503-83611:1:exon

position:83611:1
position: 83611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72152-72278:1:exon

position:72278:1
position: 72278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:77868-78058:1:exon

position:77868:1
position: 77868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78058:1
position: 78058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:79031-79095:1:exon

position:79031:1
position: 79031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79095:1
position: 79095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:80354-80450:1:exon

position:80354:1
position: 80354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80450:1
position: 80450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:81890-82036:1:exon

position:81890:1
position: 81890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82036:1
position: 82036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:82503-83611:1:exon

position:82503:1
position: 82503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

eif4h
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: eif4h
product: eukaryotic translation initiation factor 4H, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015367519.1
SIO_010081: eif4h
subclass of: SO_0000673
so part of: eif4h
location: join(72153..72278,77868..78058,79031..79095,80354..80450,81368..81448,81890..82036,82503..83610)
location: region:72153-83610:1
so has part: feature:72153-72278:1:exon
so has part: feature:77868-78058:1:exon
so has part: feature:79031-79095:1:exon
so has part: feature:80354-80450:1:exon
so has part: feature:81368-81448:1:exon
so has part: feature:81890-82036:1:exon
so has part: feature:82503-83610:1:exon

position:72153:1
position: 72153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83610:1
position: 83610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72153-72278:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77868-78058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79031-79095:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80354-80450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81368-81448:1:exon

position:81368:1
position: 81368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81448:1
position: 81448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:81890-82036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82503-83610:1:exon

eif4h
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: eif4h
product: eukaryotic translation initiation factor 4H, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_006640795.2
SIO_010081: eif4h
subclass of: SO_0000673
so part of: eif4h
location: join(72154..72278,77871..78058,79031..79095,80354..80450,81890..82036,82503..83610)
location: region:72154-83610:1
so has part: feature:72154-72278:1:exon
so has part: feature:77871-78058:1:exon
so has part: feature:79031-79095:1:exon
so has part: feature:80354-80450:1:exon
so has part: feature:81890-82036:1:exon
so has part: feature:82503-83610:1:exon

position:72154:1
position: 72154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72154-72278:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77871-78058:1:exon

position:77871:1
position: 77871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:79031-79095:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80354-80450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81890-82036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82503-83610:1:exon

eif4h
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: eif4h
product: eukaryotic translation initiation factor 4H, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006640793.2
SIO_010081: eif4h
subclass of: SO_0000673
so part of: eif4h
location: join(72155..72278,77871..78058,79031..79095,80354..80450,81368..81448,81890..82036,82503..83609)
location: region:72155-83609:1
so has part: feature:72155-72278:1:exon
so has part: feature:77871-78058:1:exon
so has part: feature:79031-79095:1:exon
so has part: feature:80354-80450:1:exon
so has part: feature:81368-81448:1:exon
so has part: feature:81890-82036:1:exon
so has part: feature:82503-83609:1:exon

position:72155:1
position: 72155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83609:1
position: 83609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72155-72278:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77871-78058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79031-79095:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80354-80450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81368-81448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:81890-82036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82503-83609:1:exon

eif4h
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: eif4h
product: eukaryotic translation initiation factor 4H, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015367520.1
SIO_010081: eif4h
subclass of: SO_0000673
so part of: eif4h
location: join(72156..72278,77868..78058,79031..79095,80354..80450,81368..81448,81890..82036,82503..82618,83618..86581)
location: region:72156-86581:1
so has part: feature:72156-72278:1:exon
so has part: feature:77868-78058:1:exon
so has part: feature:79031-79095:1:exon
so has part: feature:80354-80450:1:exon
so has part: feature:81368-81448:1:exon
so has part: feature:81890-82036:1:exon
so has part: feature:82503-82618:1:exon
so has part: feature:83618-86581:1:exon

position:72156:1
position: 72156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72156-72278:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77868-78058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79031-79095:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80354-80450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81368-81448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:81890-82036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82503-82618:1:exon

position:82618:1
position: 82618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:83618-86581:1:exon

position:83618:1
position: 83618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

eif4h
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: eif4h
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 4H isoform X3
translation: MADYDNYDDRDRAYGSFGGGRGRSRGGSGSGGPRKQKELPAEPPYTAYVGNLPFNTVQGDIDAIFKDLSVRSVRLVRDKETDKFKGFCYVEFDDLESLKEALTYDGALLGDRSLRVDIAEGRRQEKGGGGFGFRKTDERGRGAPRGPRGGGRDPRDSREDFSQSGGGFRDDDFLGGRSRGGGRPGDRRGASAGGIGRYREGPPRGGSMDFREPSEEERAQRPRLQLKPRTVDAPLNQVANPNSAIFGGAKPREEN
SIO_010081: eif4h
subclass of: SO_0000673
so part of: eif4h
location: join(72214..72278,77868..78058,79031..79095,80354..80450,81368..81448,81890..82036,82503..82618,83618..83623)
location: region:72214-83623:1
so has part: feature:72214-72278:1:exon
so has part: feature:77868-78058:1:exon
so has part: feature:79031-79095:1:exon
so has part: feature:80354-80450:1:exon
so has part: feature:81368-81448:1:exon
so has part: feature:81890-82036:1:exon
so has part: feature:82503-82618:1:exon
so has part: feature:83618-83623:1:exon

XP_015223006.1
type: Protein
SIO_000068: ncbiprotein

position:72214:1
position: 72214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83623:1
position: 83623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72214-72278:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77868-78058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79031-79095:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80354-80450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81368-81448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:81890-82036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82503-82618:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83618-83623:1:exon

eif4h
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: eif4h
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 4H isoform X1
translation: MADYDNYDDRDRAYGSFGGGRGRSRGGSGSGGPRKQKELPAEPPYTAYVGNLPFNTVQGDIDAIFKDLSVRSVRLVRDKETDKFKGFCYVEFDDLESLKEALTYDGALLGDRSLRVDIAEGRRQEKGGGGFGFRKTDERGRGAPRGPRGGGRDPRDSREDFSQSGGGFRDDDFLGGRSRGGGRPGDRRGASAGGIGRYREGPPRGGSMDFREPSEEERAQRPRLQLKPRTVDAPLNQVANPNSAIFGGAKPREEVIPKEKD
SIO_010081: eif4h
subclass of: SO_0000673
so part of: eif4h
location: join(72214..72278,77868..78058,79031..79095,80354..80450,81368..81448,81890..82036,82503..82642)
location: region:72214-82642:1
so has part: feature:72214-72278:1:exon
so has part: feature:77868-78058:1:exon
so has part: feature:79031-79095:1:exon
so has part: feature:80354-80450:1:exon
so has part: feature:81368-81448:1:exon
so has part: feature:81890-82036:1:exon
so has part: feature:82503-82642:1:exon

XP_015223005.1
type: Protein
SIO_000068: ncbiprotein

position:82642:1
position: 82642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72214-72278:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77868-78058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79031-79095:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80354-80450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81368-81448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:81890-82036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82503-82642:1:exon

eif4h
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: eif4h
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 4H isoform X4
translation: MADYDNYDDRDRAYGSFGGGRGRSRGGSGSGGPRKQKELPAEPPYTAYVGNLPFNTVQGDIDAIFKDLSVRSVRLVRDKETDKFKGFCYVEFDDLESLKEALTYDGALLGDRSLRVDIAEGRRQEKGGGGFGFRKTDERGFRDDDFLGGRSRGGGRPGDRRGASAGGIGRYREGPPRGGSMDFREPSEEERAQRPRLQLKPRTVDAPLNQVANPNSAIFGGAKPREEVIPKEKD
SIO_010081: eif4h
subclass of: SO_0000673
so part of: eif4h
location: join(72214..72278,77868..78058,79031..79095,80354..80450,81890..82036,82503..82642)
location: region:72214-82642:1
so has part: feature:72214-72278:1:exon
so has part: feature:77868-78058:1:exon
so has part: feature:79031-79095:1:exon
so has part: feature:80354-80450:1:exon
so has part: feature:81890-82036:1:exon
so has part: feature:82503-82642:1:exon

XP_015223007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72214-72278:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77868-78058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79031-79095:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80354-80450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81890-82036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82503-82642:1:exon

eif4h
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: eif4h
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 4H isoform X2
translation: MADYDNYDDRDRAYGSFGGGRGSRGGSGSGGPRKQKELPAEPPYTAYVGNLPFNTVQGDIDAIFKDLSVRSVRLVRDKETDKFKGFCYVEFDDLESLKEALTYDGALLGDRSLRVDIAEGRRQEKGGGGFGFRKTDERGRGAPRGPRGGGRDPRDSREDFSQSGGGFRDDDFLGGRSRGGGRPGDRRGASAGGIGRYREGPPRGGSMDFREPSEEERAQRPRLQLKPRTVDAPLNQVANPNSAIFGGAKPREEVIPKEKD
SIO_010081: eif4h
subclass of: SO_0000673
so part of: eif4h
location: join(72214..72278,77871..78058,79031..79095,80354..80450,81368..81448,81890..82036,82503..82642)
location: region:72214-82642:1
so has part: feature:72214-72278:1:exon
so has part: feature:77871-78058:1:exon
so has part: feature:79031-79095:1:exon
so has part: feature:80354-80450:1:exon
so has part: feature:81368-81448:1:exon
so has part: feature:81890-82036:1:exon
so has part: feature:82503-82642:1:exon

XP_006640856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72214-72278:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77871-78058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79031-79095:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80354-80450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81368-81448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:81890-82036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82503-82642:1:exon

eif4h
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: eif4h
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 4H isoform X5
translation: MADYDNYDDRDRAYGSFGGGRGSRGGSGSGGPRKQKELPAEPPYTAYVGNLPFNTVQGDIDAIFKDLSVRSVRLVRDKETDKFKGFCYVEFDDLESLKEALTYDGALLGDRSLRVDIAEGRRQEKGGGGFGFRKTDERGFRDDDFLGGRSRGGGRPGDRRGASAGGIGRYREGPPRGGSMDFREPSEEERAQRPRLQLKPRTVDAPLNQVANPNSAIFGGAKPREEVIPKEKD
SIO_010081: eif4h
subclass of: SO_0000673
so part of: eif4h
location: join(72214..72278,77871..78058,79031..79095,80354..80450,81890..82036,82503..82642)
location: region:72214-82642:1
so has part: feature:72214-72278:1:exon
so has part: feature:77871-78058:1:exon
so has part: feature:79031-79095:1:exon
so has part: feature:80354-80450:1:exon
so has part: feature:81890-82036:1:exon
so has part: feature:82503-82642:1:exon

XP_006640858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72214-72278:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77871-78058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79031-79095:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80354-80450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81890-82036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82503-82642:1:exon

lat2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: lat2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 88447..110264
location: region:88447-110264:1
so has part: feature:88447-110264:1:exon
subclass of: SO_0000010

107079930
type: Gene
SIO_000068: ncbigene

position:88447:1
position: 88447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110264:1
position: 110264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88447-110264:1:exon

lat2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: lat2
product: linker for activation of T-cells family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015367522.1
SIO_010081: lat2
subclass of: SO_0000673
so part of: lat2
location: join(88447..88473,96495..96553,98043..98147,99463..99505,100046..100083,100381..100429,101008..101042,101778..101822,102180..102210,103556..103611,106033..106098,107497..107583,107794..110264)
location: region:88447-110264:1
so has part: feature:88447-88473:1:exon
so has part: feature:96495-96553:1:exon
so has part: feature:98043-98147:1:exon
so has part: feature:99463-99505:1:exon
so has part: feature:100046-100083:1:exon
so has part: feature:100381-100429:1:exon
so has part: feature:101008-101042:1:exon
so has part: feature:101778-101822:1:exon
so has part: feature:102180-102210:1:exon
so has part: feature:103556-103611:1:exon
so has part: feature:106033-106098:1:exon
so has part: feature:107497-107583:1:exon
so has part: feature:107794-110264:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88447-88473:1:exon

position:88473:1
position: 88473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:96495-96553:1:exon

position:96495:1
position: 96495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96553:1
position: 96553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:98043-98147:1:exon

position:98043:1
position: 98043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98147:1
position: 98147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:99463-99505:1:exon

position:99463:1
position: 99463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99505:1
position: 99505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:100046-100083:1:exon

position:100046:1
position: 100046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100083:1
position: 100083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:100381-100429:1:exon

position:100381:1
position: 100381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100429:1
position: 100429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:101008-101042:1:exon

position:101008:1
position: 101008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101042:1
position: 101042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:101778-101822:1:exon

position:101778:1
position: 101778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101822:1
position: 101822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:102180-102210:1:exon

position:102180:1
position: 102180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102210:1
position: 102210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:103556-103611:1:exon

position:103556:1
position: 103556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103611:1
position: 103611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:106033-106098:1:exon

position:106033:1
position: 106033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106098:1
position: 106098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:107497-107583:1:exon

position:107497:1
position: 107497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107583:1
position: 107583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:107794-110264:1:exon

position:107794:1
position: 107794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

lat2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: lat2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: linker for activation of T-cells family member 2
translation: MSAEFNPHGALLALLSAAPLLVILLMCLRCHRRSMKIREENQIYDPQLFEDRGFTVIRSKTVTRPNQIVRAPPPLPPEESQLEIEQDAQAVVNGEHSKYQNVPILAKEGCEPMYVDPIAGSPYQNCILKTSEKDADSNSYENVFPTTEKTTSQDSDGSDYENSTFLQTVKRRGCSAAPSADEEGDEPDYVNALVVKP
SIO_010081: lat2
subclass of: SO_0000673
so part of: lat2
location: join(98045..98147,99463..99505,100046..100083,100381..100429,101008..101042,101778..101822,102180..102210,103556..103611,106033..106098,107497..107583,107794..107834)
location: region:98045-107834:1
so has part: feature:98045-98147:1:exon
so has part: feature:99463-99505:1:exon
so has part: feature:100046-100083:1:exon
so has part: feature:100381-100429:1:exon
so has part: feature:101008-101042:1:exon
so has part: feature:101778-101822:1:exon
so has part: feature:102180-102210:1:exon
so has part: feature:103556-103611:1:exon
so has part: feature:106033-106098:1:exon
so has part: feature:107497-107583:1:exon
so has part: feature:107794-107834:1:exon

XP_015223008.1
type: Protein
SIO_000068: ncbiprotein

position:98045:1
position: 98045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107834:1
position: 107834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98045-98147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99463-99505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:100046-100083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:100381-100429:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101008-101042:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101778-101822:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102180-102210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:103556-103611:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106033-106098:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:107497-107583:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107794-107834:1:exon

rfc2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: rfc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(110731..118008)
location: region:110731-118008:-1
so has part: feature:110731-118008:-1:exon
subclass of: SO_0000010

102694053
type: Gene
SIO_000068: ncbigene

position:110731:-1
position: 110731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118008:-1
position: 118008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110731-118008:-1:exon

rfc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: rfc2
product: replication factor C subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_006640932.2
SIO_010081: rfc2
subclass of: SO_0000673
so part of: rfc2
location: complement(join(110731..111154,111823..111936,112514..112594,112853..112918,113475..113632,114303..114403,114791..114892,115671..115777,116378..116419,117265..117334,117838..118008))
location: region:110731-118008:-1
so has part: feature:117838-118008:-1:exon
so has part: feature:117265-117334:-1:exon
so has part: feature:116378-116419:-1:exon
so has part: feature:115671-115777:-1:exon
so has part: feature:114791-114892:-1:exon
so has part: feature:114303-114403:-1:exon
so has part: feature:113475-113632:-1:exon
so has part: feature:112853-112918:-1:exon
so has part: feature:112514-112594:-1:exon
so has part: feature:111823-111936:-1:exon
so has part: feature:110731-111154:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117838-118008:-1:exon

position:117838:-1
position: 117838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:117265-117334:-1:exon

position:117265:-1
position: 117265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117334:-1
position: 117334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:116378-116419:-1:exon

position:116378:-1
position: 116378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116419:-1
position: 116419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:115671-115777:-1:exon

position:115671:-1
position: 115671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115777:-1
position: 115777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:114791-114892:-1:exon

position:114791:-1
position: 114791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114892:-1
position: 114892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:114303-114403:-1:exon

position:114303:-1
position: 114303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114403:-1
position: 114403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:113475-113632:-1:exon

position:113475:-1
position: 113475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113632:-1
position: 113632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:112853-112918:-1:exon

position:112853:-1
position: 112853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112918:-1
position: 112918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:112514-112594:-1:exon

position:112514:-1
position: 112514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112594:-1
position: 112594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:111823-111936:-1:exon

position:111823:-1
position: 111823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111936:-1
position: 111936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:110731-111154:-1:exon

position:111154:-1
position: 111154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rfc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: rfc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: replication factor C subunit 2
translation: MEVDMTGAERIGTEDTQLKRDPAAGRGSGIAYELPWVEKYRPLKLNEIVGNEETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIKLFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLRDEQIMMRLMEVVEQEGVQTTNDGLEAIIFTAQGDMRQALNNLQSTNSGFGFVNSENVFKVCDEPHPLLVKAMLEHCVNAKIDEAYKIVEQLWALGYSPEDIIGNIFRVCKTFQMPEYLKLEFIKEIGYTHMKVAEGVNSLLQLAGLLGRLCAKTAAPDVS
SIO_010081: rfc2
subclass of: SO_0000673
so part of: rfc2
location: complement(join(111044..111154,111823..111936,112514..112594,112853..112918,113475..113632,114303..114403,114791..114892,115671..115777,116378..116419,117265..117334,117838..117944))
location: region:111044-117944:-1
so has part: feature:117838-117944:-1:exon
so has part: feature:117265-117334:-1:exon
so has part: feature:116378-116419:-1:exon
so has part: feature:115671-115777:-1:exon
so has part: feature:114791-114892:-1:exon
so has part: feature:114303-114403:-1:exon
so has part: feature:113475-113632:-1:exon
so has part: feature:112853-112918:-1:exon
so has part: feature:112514-112594:-1:exon
so has part: feature:111823-111936:-1:exon
so has part: feature:111044-111154:-1:exon

XP_006640995.1
type: Protein
SIO_000068: ncbiprotein

position:111044:-1
position: 111044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117944:-1
position: 117944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117838-117944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117265-117334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:116378-116419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:115671-115777:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114791-114892:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:114303-114403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113475-113632:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:112853-112918:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112514-112594:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:111823-111936:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:111044-111154:-1:exon

rffl
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: rffl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 118086..134656
location: region:118086-134656:1
so has part: feature:118086-134656:1:exon
subclass of: SO_0000010

102685629
type: Gene
SIO_000068: ncbigene

position:118086:1
position: 118086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134656:1
position: 134656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118086-134656:1:exon

rffl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: rffl
product: ring finger and FYVE-like domain containing E3 ubiquitin protein ligase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015367518.1
SIO_010081: rffl
subclass of: SO_0000673
so part of: rffl
location: join(118086..119000,127453..127634,129785..130150,130407..130484,132249..132459,133723..134656)
location: region:118086-134656:1
so has part: feature:118086-119000:1:exon
so has part: feature:127453-127634:1:exon
so has part: feature:129785-130150:1:exon
so has part: feature:130407-130484:1:exon
so has part: feature:132249-132459:1:exon
so has part: feature:133723-134656:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118086-119000:1:exon

position:119000:1
position: 119000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:127453-127634:1:exon

position:127453:1
position: 127453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127634:1
position: 127634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:129785-130150:1:exon

position:129785:1
position: 129785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130150:1
position: 130150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:130407-130484:1:exon

position:130407:1
position: 130407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130484:1
position: 130484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:132249-132459:1:exon

position:132249:1
position: 132249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132459:1
position: 132459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:133723-134656:1:exon

position:133723:1
position: 133723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rffl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: rffl
product: ring finger and FYVE-like domain containing E3 ubiquitin protein ligase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015367515.1
SIO_010081: rffl
subclass of: SO_0000673
so part of: rffl
location: join(118088..119000,127453..127634,129785..130150,130407..130484,132249..132459,133206..133229,133723..134656)
location: region:118088-134656:1
so has part: feature:118088-119000:1:exon
so has part: feature:127453-127634:1:exon
so has part: feature:129785-130150:1:exon
so has part: feature:130407-130484:1:exon
so has part: feature:132249-132459:1:exon
so has part: feature:133206-133229:1:exon
so has part: feature:133723-134656:1:exon

position:118088:1
position: 118088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118088-119000:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:127453-127634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129785-130150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130407-130484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132249-132459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133206-133229:1:exon

position:133206:1
position: 133206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133229:1
position: 133229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:133723-134656:1:exon

rffl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: rffl
product: ring finger and FYVE-like domain containing E3 ubiquitin protein ligase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015367517.1
SIO_010081: rffl
subclass of: SO_0000673
so part of: rffl
location: join(119027..119420,127453..127634,129785..130150,130407..130484,132249..132459,133206..133229,133723..134656)
location: region:119027-134656:1
so has part: feature:119027-119420:1:exon
so has part: feature:127453-127634:1:exon
so has part: feature:129785-130150:1:exon
so has part: feature:130407-130484:1:exon
so has part: feature:132249-132459:1:exon
so has part: feature:133206-133229:1:exon
so has part: feature:133723-134656:1:exon

position:119027:1
position: 119027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119027-119420:1:exon

position:119420:1
position: 119420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:127453-127634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129785-130150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130407-130484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132249-132459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133206-133229:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133723-134656:1:exon

rffl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: rffl
product: ring finger and FYVE-like domain containing E3 ubiquitin protein ligase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015367516.1
SIO_010081: rffl
subclass of: SO_0000673
so part of: rffl
location: join(119443..119654,127453..127634,129785..130150,130407..130484,132249..132459,133206..133229,133723..134656)
location: region:119443-134656:1
so has part: feature:119443-119654:1:exon
so has part: feature:127453-127634:1:exon
so has part: feature:129785-130150:1:exon
so has part: feature:130407-130484:1:exon
so has part: feature:132249-132459:1:exon
so has part: feature:133206-133229:1:exon
so has part: feature:133723-134656:1:exon

position:119443:1
position: 119443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119443-119654:1:exon

position:119654:1
position: 119654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:127453-127634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129785-130150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130407-130484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132249-132459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133206-133229:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133723-134656:1:exon

rffl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: rffl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase rififylin isoform X1
translation: MWASCCNWMCLDTTTVEETSSTRRQAYTNSGYSSYPSPPAPEQTCKACGGRFDTSSRKHVCTDCKKSFCSRCSEQPEFGLRVCHTCRRFHGILSERAELMKLKVKDLRDYLHLHEVSTQMCREKEELVELVMGRQTPSSSSSSHGDAQSHTPQPGPTPGPASPSTSQGPAPGCLPRGDQQIPVPSCPGETPASETEPAPQEEQESQSSDAEETPAPGRRASLSDLTNAEDIEALSVRQLKEILARNFVDYKGCCEKWELMERVTRLYHDQQELQNLVSNNGNSTDPSGPPGMEENLCKICMDSPIDCVLLECGHMVTCTKCGKLMSECPICRQYVVRAVHVFRS
SIO_010081: rffl
subclass of: SO_0000673
so part of: rffl
location: join(127461..127634,129785..130150,130407..130484,132249..132459,133206..133229,133723..133904)
location: region:127461-133904:1
so has part: feature:127461-127634:1:exon
so has part: feature:129785-130150:1:exon
so has part: feature:130407-130484:1:exon
so has part: feature:132249-132459:1:exon
so has part: feature:133206-133229:1:exon
so has part: feature:133723-133904:1:exon

XP_015223001.1
type: Protein
SIO_000068: ncbiprotein

position:127461:1
position: 127461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133904:1
position: 133904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127461-127634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129785-130150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130407-130484:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132249-132459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:133206-133229:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133723-133904:1:exon

rffl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: rffl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase rififylin isoform X1
translation: MWASCCNWMCLDTTTVEETSSTRRQAYTNSGYSSYPSPPAPEQTCKACGGRFDTSSRKHVCTDCKKSFCSRCSEQPEFGLRVCHTCRRFHGILSERAELMKLKVKDLRDYLHLHEVSTQMCREKEELVELVMGRQTPSSSSSSHGDAQSHTPQPGPTPGPASPSTSQGPAPGCLPRGDQQIPVPSCPGETPASETEPAPQEEQESQSSDAEETPAPGRRASLSDLTNAEDIEALSVRQLKEILARNFVDYKGCCEKWELMERVTRLYHDQQELQNLVSNNGNSTDPSGPPGMEENLCKICMDSPIDCVLLECGHMVTCTKCGKLMSECPICRQYVVRAVHVFRS
SIO_010081: rffl
subclass of: SO_0000673
so part of: rffl
location: join(127461..127634,129785..130150,130407..130484,132249..132459,133206..133229,133723..133904)
location: region:127461-133904:1
so has part: feature:127461-127634:1:exon
so has part: feature:129785-130150:1:exon
so has part: feature:130407-130484:1:exon
so has part: feature:132249-132459:1:exon
so has part: feature:133206-133229:1:exon
so has part: feature:133723-133904:1:exon

XP_015223002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127461-127634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129785-130150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130407-130484:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132249-132459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:133206-133229:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133723-133904:1:exon

rffl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: rffl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase rififylin isoform X1
translation: MWASCCNWMCLDTTTVEETSSTRRQAYTNSGYSSYPSPPAPEQTCKACGGRFDTSSRKHVCTDCKKSFCSRCSEQPEFGLRVCHTCRRFHGILSERAELMKLKVKDLRDYLHLHEVSTQMCREKEELVELVMGRQTPSSSSSSHGDAQSHTPQPGPTPGPASPSTSQGPAPGCLPRGDQQIPVPSCPGETPASETEPAPQEEQESQSSDAEETPAPGRRASLSDLTNAEDIEALSVRQLKEILARNFVDYKGCCEKWELMERVTRLYHDQQELQNLVSNNGNSTDPSGPPGMEENLCKICMDSPIDCVLLECGHMVTCTKCGKLMSECPICRQYVVRAVHVFRS
SIO_010081: rffl
subclass of: SO_0000673
so part of: rffl
location: join(127461..127634,129785..130150,130407..130484,132249..132459,133206..133229,133723..133904)
location: region:127461-133904:1
so has part: feature:127461-127634:1:exon
so has part: feature:129785-130150:1:exon
so has part: feature:130407-130484:1:exon
so has part: feature:132249-132459:1:exon
so has part: feature:133206-133229:1:exon
so has part: feature:133723-133904:1:exon

XP_015223003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127461-127634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129785-130150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130407-130484:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132249-132459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:133206-133229:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133723-133904:1:exon

rffl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: rffl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase rififylin isoform X2
translation: MWASCCNWMCLDTTTVEETSSTRRQAYTNSGYSSYPSPPAPEQTCKACGGRFDTSSRKHVCTDCKKSFCSRCSEQPEFGLRVCHTCRRFHGILSERAELMKLKVKDLRDYLHLHEVSTQMCREKEELVELVMGRQTPSSSSSSHGDAQSHTPQPGPTPGPASPSTSQGPAPGCLPRGDQQIPVPSCPGETPASETEPAPQEEQESQSSDAEETPAPGRRASLSDLTNAEDIEALSVRQLKEILARNFVDYKGCCEKWELMERVTRLYHDQQELQNLDPSGPPGMEENLCKICMDSPIDCVLLECGHMVTCTKCGKLMSECPICRQYVVRAVHVFRS
SIO_010081: rffl
subclass of: SO_0000673
so part of: rffl
location: join(127461..127634,129785..130150,130407..130484,132249..132459,133723..133904)
location: region:127461-133904:1
so has part: feature:127461-127634:1:exon
so has part: feature:129785-130150:1:exon
so has part: feature:130407-130484:1:exon
so has part: feature:132249-132459:1:exon
so has part: feature:133723-133904:1:exon

XP_015223004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127461-127634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129785-130150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130407-130484:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132249-132459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:133723-133904:1:exon

trim50
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: trim50
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(140013..146581)
location: region:140013-146581:-1
so has part: feature:140013-146581:-1:exon
subclass of: SO_0000010

102694253
type: Gene
SIO_000068: ncbigene

position:140013:-1
position: 140013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146581:-1
position: 146581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140013-146581:-1:exon

trim50
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: trim50
product: tripartite motif containing 50
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015367787.1
SIO_010081: trim50
subclass of: SO_0000673
so part of: trim50
location: complement(join(140013..142864,142959..143089,143707..143729,144126..144356,144877..144972,145878..146581))
location: region:140013-146581:-1
so has part: feature:145878-146581:-1:exon
so has part: feature:144877-144972:-1:exon
so has part: feature:144126-144356:-1:exon
so has part: feature:143707-143729:-1:exon
so has part: feature:142959-143089:-1:exon
so has part: feature:140013-142864:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145878-146581:-1:exon

position:145878:-1
position: 145878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144877-144972:-1:exon

position:144877:-1
position: 144877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144972:-1
position: 144972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:144126-144356:-1:exon

position:144126:-1
position: 144126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144356:-1
position: 144356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:143707-143729:-1:exon

position:143707:-1
position: 143707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143729:-1
position: 143729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:142959-143089:-1:exon

position:142959:-1
position: 142959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143089:-1
position: 143089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:140013-142864:-1:exon

position:142864:-1
position: 142864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

trim50
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: trim50
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM50
translation: MARRPSLESLEDQLLCPVCLELFAEPLMLQCGHSYCKCCVRSMAIDQFGQLQCPVCRCEVDGDSPPPNVTLAKIVDALRELSGSQPEAEVCPQHHNPLSLYCEEDQTVICGLCGSIGAHRGHRITPLGSVYSRMKEDVSCLMTELQTQRRKLEEQICKMAYNKSRITNESDVFKWVIRKEFGELRRYIELEEADFMQAVESKAASLIASIQSQVDDMTQVLAGLQEAEGTLERLNNESHLGFITKYGSIAPRLRESQQKQQRGERTYSAITFTPGFHHNDIKISVWKRLHRRVLPAPECLKLDPLTAHPMLQLSCGETVVECGTEPCRLPPNPERFCYSHCVLASRGFSSGKHYWEVVVEDKPRWRLGLIKGTTSRRGKLVKSPESGVWLIGLREGRLYEAFANPRVPLPLSARPARIGIFLDYEKGELTFYNADSNQELGFIYSFQAELQGKVYPLFDVCWHERGANKHPLILPQPPAGK
SIO_010081: trim50
subclass of: SO_0000673
so part of: trim50
location: complement(join(142305..142864,142959..143089,143707..143729,144126..144356,144877..144972,145878..146282))
location: region:142305-146282:-1
so has part: feature:145878-146282:-1:exon
so has part: feature:144877-144972:-1:exon
so has part: feature:144126-144356:-1:exon
so has part: feature:143707-143729:-1:exon
so has part: feature:142959-143089:-1:exon
so has part: feature:142305-142864:-1:exon

XP_015223273.1
type: Protein
SIO_000068: ncbiprotein

position:142305:-1
position: 142305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146282:-1
position: 146282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145878-146282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144877-144972:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144126-144356:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:143707-143729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142959-143089:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:142305-142864:-1:exon

fkbp6
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: fkbp6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 147624..171015
location: region:147624-171015:1
so has part: feature:147624-171015:1:exon
subclass of: SO_0000010

102694448
type: Gene
SIO_000068: ncbigene

position:147624:1
position: 147624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171015:1
position: 171015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147624-171015:1:exon

fkbp6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: fkbp6
product: FK506 binding protein 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015367788.1
SIO_010081: fkbp6
subclass of: SO_0000673
so part of: fkbp6
location: join(147624..148397,149181..149298,150535..150624,151208..151410,151696..151815,152776..152973,153530..153639,153732..153815,170800..171015)
location: region:147624-171015:1
so has part: feature:147624-148397:1:exon
so has part: feature:149181-149298:1:exon
so has part: feature:150535-150624:1:exon
so has part: feature:151208-151410:1:exon
so has part: feature:151696-151815:1:exon
so has part: feature:152776-152973:1:exon
so has part: feature:153530-153639:1:exon
so has part: feature:153732-153815:1:exon
so has part: feature:170800-171015:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147624-148397:1:exon

position:148397:1
position: 148397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:149181-149298:1:exon

position:149181:1
position: 149181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149298:1
position: 149298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:150535-150624:1:exon

position:150535:1
position: 150535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150624:1
position: 150624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:151208-151410:1:exon

position:151208:1
position: 151208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151410:1
position: 151410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:151696-151815:1:exon

position:151696:1
position: 151696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151815:1
position: 151815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:152776-152973:1:exon

position:152776:1
position: 152776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152973:1
position: 152973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:153530-153639:1:exon

position:153530:1
position: 153530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153639:1
position: 153639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:153732-153815:1:exon

position:153732:1
position: 153732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153815:1
position: 153815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:170800-171015:1:exon

position:170800:1
position: 170800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fkbp6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: fkbp6
product: FK506 binding protein 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_006640934.2
SIO_010081: fkbp6
subclass of: SO_0000673
so part of: fkbp6
location: join(147625..148397,149181..149298,150535..150624,151208..151410,151696..151815,152776..152973,153530..153639,153732..153815,156557..157414)
location: region:147625-157414:1
so has part: feature:147625-148397:1:exon
so has part: feature:149181-149298:1:exon
so has part: feature:150535-150624:1:exon
so has part: feature:151208-151410:1:exon
so has part: feature:151696-151815:1:exon
so has part: feature:152776-152973:1:exon
so has part: feature:153530-153639:1:exon
so has part: feature:153732-153815:1:exon
so has part: feature:156557-157414:1:exon

position:147625:1
position: 147625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157414:1
position: 157414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147625-148397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:149181-149298:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150535-150624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151208-151410:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151696-151815:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152776-152973:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153530-153639:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153732-153815:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:156557-157414:1:exon

position:156557:1
position: 156557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fkbp6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: fkbp6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive peptidyl-prolyl cis-trans isomerase FKBP6
translation: MDMSTNGLSARVQQFLNPEEQQRNSESQSPYRRLARRMQALVGDGGILKEVIHPGVGQLVPENASVSFRYAGFLEYSDSPFESNSYLKHPRLMRLGREVTLVGLEVGLLTMRKGEFARFLFLPDYAYGAMGCPPLIPPAATVLFEVHLLDFLDTAEVDSFFDLTLEQQRTVPLSTALGVVDTERTFGNRCFGQGRYEEAKEHYKKGIAVLGDRQPMGDEEKRSMEALQLPILLNLSLTQLRLERPAKALDYGQKALEISPHNAKALFRCGQAYMEMGEYRKARNCLMMAQEKKPLDTDIKDLLKKLESCHKGYVAECKEMCARMFASLNAASKK
SIO_010081: fkbp6
subclass of: SO_0000673
so part of: fkbp6
location: join(148314..148397,149181..149298,150535..150624,151208..151410,151696..151815,152776..152973,153530..153639,153732..153813)
location: region:148314-153813:1
so has part: feature:148314-148397:1:exon
so has part: feature:149181-149298:1:exon
so has part: feature:150535-150624:1:exon
so has part: feature:151208-151410:1:exon
so has part: feature:151696-151815:1:exon
so has part: feature:152776-152973:1:exon
so has part: feature:153530-153639:1:exon
so has part: feature:153732-153813:1:exon

XP_006640997.2
type: Protein
SIO_000068: ncbiprotein

position:148314:1
position: 148314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153813:1
position: 153813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148314-148397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:149181-149298:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150535-150624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151208-151410:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151696-151815:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152776-152973:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153530-153639:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153732-153813:1:exon

fkbp6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: fkbp6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive peptidyl-prolyl cis-trans isomerase FKBP6
translation: MDMSTNGLSARVQQFLNPEEQQRNSESQSPYRRLARRMQALVGDGGILKEVIHPGVGQLVPENASVSFRYAGFLEYSDSPFESNSYLKHPRLMRLGREVTLVGLEVGLLTMRKGEFARFLFLPDYAYGAMGCPPLIPPAATVLFEVHLLDFLDTAEVDSFFDLTLEQQRTVPLSTALGVVDTERTFGNRCFGQGRYEEAKEHYKKGIAVLGDRQPMGDEEKRSMEALQLPILLNLSLTQLRLERPAKALDYGQKALEISPHNAKALFRCGQAYMEMGEYRKARNCLMMAQEKKPLDTDIKDLLKKLESCHKGYVAECKEMCARMFASLNAASKK
SIO_010081: fkbp6
subclass of: SO_0000673
so part of: fkbp6
location: join(148314..148397,149181..149298,150535..150624,151208..151410,151696..151815,152776..152973,153530..153639,153732..153813)
location: region:148314-153813:1
so has part: feature:148314-148397:1:exon
so has part: feature:149181-149298:1:exon
so has part: feature:150535-150624:1:exon
so has part: feature:151208-151410:1:exon
so has part: feature:151696-151815:1:exon
so has part: feature:152776-152973:1:exon
so has part: feature:153530-153639:1:exon
so has part: feature:153732-153813:1:exon

XP_015223274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148314-148397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:149181-149298:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150535-150624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151208-151410:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151696-151815:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152776-152973:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153530-153639:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153732-153813:1:exon

fzd9
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: fzd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 155713..197069
location: region:155713-197069:1
so has part: feature:155713-197069:1:exon
subclass of: SO_0000010

102685832
type: Gene
SIO_000068: ncbigene

position:155713:1
position: 155713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197069:1
position: 197069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155713-197069:1:exon

fzd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: fzd9
product: frizzled class receptor 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015367786.1
SIO_010081: fzd9
subclass of: SO_0000673
so part of: fzd9
location: join(155713..156692,183117..183252,184229..184399,189786..189994,193836..197069)
location: region:155713-197069:1
so has part: feature:155713-156692:1:exon
so has part: feature:183117-183252:1:exon
so has part: feature:184229-184399:1:exon
so has part: feature:189786-189994:1:exon
so has part: feature:193836-197069:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155713-156692:1:exon

position:156692:1
position: 156692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183117-183252:1:exon

position:183117:1
position: 183117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183252:1
position: 183252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:184229-184399:1:exon

position:184229:1
position: 184229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184399:1
position: 184399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:189786-189994:1:exon

position:189786:1
position: 189786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189994:1
position: 189994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:193836-197069:1:exon

position:193836:1
position: 193836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fzd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: fzd9
product: frizzled class receptor 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_006640797.2
SIO_010081: fzd9
subclass of: SO_0000673
so part of: fzd9
location: join(187282..187357,189786..189994,193836..197069)
location: region:187282-197069:1
so has part: feature:187282-187357:1:exon
so has part: feature:189786-189994:1:exon
so has part: feature:193836-197069:1:exon

position:187282:1
position: 187282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187282-187357:1:exon

position:187357:1
position: 187357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:189786-189994:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193836-197069:1:exon

fzd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: fzd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: frizzled-9
translation: MEAHHVKIALCLWCQLMVAGSSLEIGAYDIERGRQAKCEPIEIPMCQGIGYNMTRMPNYMNHESQSEAALKLQEFAPLVEYGCHVHLRFFLCSLYTPMCTDKVSSSIPACRPMCEQARQKCSPIMEKFSYKWPDSLDCSKLPTKNDPHALCMEAPENDTRTEPKKGEGMLPVPPRPRQPGSGNGRSQGSLGSCENPDKFQYVEKSQSCAPRCSSAVDVFWSREDKDFAFIWMAVWSTLCFVSTAFTVLTFLLDPHRFQYPERPIIFLSMCYNVYSVAFIIRSVAGAENIACDRENGELYIIQEGLESTGCTIVFLILYYFGMASSIWWVILTLTWFLAAGKKWGHEAIEAHSSYFHMAAWGIPAMKTIVILTMRKVAGDELTGLCYVGSMDVNALTGFVLVPLSCYLVIGTSFILTGFVALFHIRKIMKTGGTNTEKLEKLMVKIGVFSILYTVPATCVIICYFYERLNMEYWKFRALESKCTGFPGRRSEDCSLEASVPTVAVFMLKIFMSLVVGITSGVWVWSSKTLQTWQGLCHRKLAVRTSRKPCSGVSCSSTHCHYKAPAMVLHMTKTDPYLDSPTHV
SIO_010081: fzd9
subclass of: SO_0000673
so part of: fzd9
location: 194779..196530
location: region:194779-196530:1
so has part: feature:194779-196530:1:exon

XP_006640860.1
type: Protein
SIO_000068: ncbiprotein

position:194779:1
position: 194779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196530:1
position: 196530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194779-196530:1:exon

fzd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: fzd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: frizzled-9
translation: MEAHHVKIALCLWCQLMVAGSSLEIGAYDIERGRQAKCEPIEIPMCQGIGYNMTRMPNYMNHESQSEAALKLQEFAPLVEYGCHVHLRFFLCSLYTPMCTDKVSSSIPACRPMCEQARQKCSPIMEKFSYKWPDSLDCSKLPTKNDPHALCMEAPENDTRTEPKKGEGMLPVPPRPRQPGSGNGRSQGSLGSCENPDKFQYVEKSQSCAPRCSSAVDVFWSREDKDFAFIWMAVWSTLCFVSTAFTVLTFLLDPHRFQYPERPIIFLSMCYNVYSVAFIIRSVAGAENIACDRENGELYIIQEGLESTGCTIVFLILYYFGMASSIWWVILTLTWFLAAGKKWGHEAIEAHSSYFHMAAWGIPAMKTIVILTMRKVAGDELTGLCYVGSMDVNALTGFVLVPLSCYLVIGTSFILTGFVALFHIRKIMKTGGTNTEKLEKLMVKIGVFSILYTVPATCVIICYFYERLNMEYWKFRALESKCTGFPGRRSEDCSLEASVPTVAVFMLKIFMSLVVGITSGVWVWSSKTLQTWQGLCHRKLAVRTSRKPCSGVSCSSTHCHYKAPAMVLHMTKTDPYLDSPTHV
SIO_010081: fzd9
subclass of: SO_0000673
so part of: fzd9
location: 194779..196530
location: region:194779-196530:1
so has part: feature:194779-196530:1:exon

XP_015223272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194779-196530:1:exon

baz1b
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: baz1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(232159..251432)
location: region:232159-251432:-1
so has part: feature:232159-251432:-1:exon
subclass of: SO_0000010

102694644
type: Gene
SIO_000068: ncbigene

position:232159:-1
position: 232159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251432:-1
position: 251432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232159-251432:-1:exon

baz1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: baz1b
product: bromodomain adjacent to zinc finger domain 1B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015367760.1
SIO_010081: baz1b
subclass of: SO_0000673
so part of: baz1b
location: complement(join(232159..233249,233605..233711,234860..234996,236692..236807,237227..237374,237866..238045,238603..238750,239183..239368,239665..239842,240382..240480,241275..241395,241668..241798,242311..242449,242739..244362,244691..244885,245038..245235,245757..245878,246033..246225,246396..246540,247606..247722,250070..251432))
location: region:232159-251432:-1
so has part: feature:250070-251432:-1:exon
so has part: feature:247606-247722:-1:exon
so has part: feature:246396-246540:-1:exon
so has part: feature:246033-246225:-1:exon
so has part: feature:245757-245878:-1:exon
so has part: feature:245038-245235:-1:exon
so has part: feature:244691-244885:-1:exon
so has part: feature:242739-244362:-1:exon
so has part: feature:242311-242449:-1:exon
so has part: feature:241668-241798:-1:exon
so has part: feature:241275-241395:-1:exon
so has part: feature:240382-240480:-1:exon
so has part: feature:239665-239842:-1:exon
so has part: feature:239183-239368:-1:exon
so has part: feature:238603-238750:-1:exon
so has part: feature:237866-238045:-1:exon
so has part: feature:237227-237374:-1:exon
so has part: feature:236692-236807:-1:exon
so has part: feature:234860-234996:-1:exon
so has part: feature:233605-233711:-1:exon
so has part: feature:232159-233249:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250070-251432:-1:exon

position:250070:-1
position: 250070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:247606-247722:-1:exon

position:247606:-1
position: 247606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247722:-1
position: 247722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:246396-246540:-1:exon

position:246396:-1
position: 246396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246540:-1
position: 246540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:246033-246225:-1:exon

position:246033:-1
position: 246033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246225:-1
position: 246225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:245757-245878:-1:exon

position:245757:-1
position: 245757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245878:-1
position: 245878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:245038-245235:-1:exon

position:245038:-1
position: 245038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245235:-1
position: 245235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:244691-244885:-1:exon

position:244691:-1
position: 244691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244885:-1
position: 244885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:242739-244362:-1:exon

position:242739:-1
position: 242739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244362:-1
position: 244362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:242311-242449:-1:exon

position:242311:-1
position: 242311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242449:-1
position: 242449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:241668-241798:-1:exon

position:241668:-1
position: 241668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241798:-1
position: 241798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:241275-241395:-1:exon

position:241275:-1
position: 241275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241395:-1
position: 241395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:240382-240480:-1:exon

position:240382:-1
position: 240382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240480:-1
position: 240480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:239665-239842:-1:exon

position:239665:-1
position: 239665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239842:-1
position: 239842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:239183-239368:-1:exon

position:239183:-1
position: 239183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239368:-1
position: 239368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:238603-238750:-1:exon

position:238603:-1
position: 238603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238750:-1
position: 238750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:237866-238045:-1:exon

position:237866:-1
position: 237866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238045:-1
position: 238045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:237227-237374:-1:exon

position:237227:-1
position: 237227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237374:-1
position: 237374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:236692-236807:-1:exon

position:236692:-1
position: 236692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236807:-1
position: 236807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:234860-234996:-1:exon

position:234860:-1
position: 234860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234996:-1
position: 234996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:233605-233711:-1:exon

position:233605:-1
position: 233605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233711:-1
position: 233711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:232159-233249:-1:exon

position:233249:-1
position: 233249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

baz1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: baz1b
product: bromodomain adjacent to zinc finger domain 1B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015367761.1
SIO_010081: baz1b
subclass of: SO_0000673
so part of: baz1b
location: complement(join(232159..233249,233605..233711,234860..234996,236692..236807,237227..237374,238603..238750,239183..239368,239665..239842,240382..240480,241275..241395,241668..241798,242311..242449,242739..244362,244691..244885,245038..245235,245757..245878,246033..246225,246396..246540,247606..247722,250070..251430))
location: region:232159-251430:-1
so has part: feature:250070-251430:-1:exon
so has part: feature:247606-247722:-1:exon
so has part: feature:246396-246540:-1:exon
so has part: feature:246033-246225:-1:exon
so has part: feature:245757-245878:-1:exon
so has part: feature:245038-245235:-1:exon
so has part: feature:244691-244885:-1:exon
so has part: feature:242739-244362:-1:exon
so has part: feature:242311-242449:-1:exon
so has part: feature:241668-241798:-1:exon
so has part: feature:241275-241395:-1:exon
so has part: feature:240382-240480:-1:exon
so has part: feature:239665-239842:-1:exon
so has part: feature:239183-239368:-1:exon
so has part: feature:238603-238750:-1:exon
so has part: feature:237227-237374:-1:exon
so has part: feature:236692-236807:-1:exon
so has part: feature:234860-234996:-1:exon
so has part: feature:233605-233711:-1:exon
so has part: feature:232159-233249:-1:exon

position:251430:-1
position: 251430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250070-251430:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247606-247722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:246396-246540:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246033-246225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245757-245878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:245038-245235:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244691-244885:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:242739-244362:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242311-242449:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:241668-241798:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:241275-241395:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:240382-240480:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239665-239842:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:239183-239368:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:238603-238750:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:237227-237374:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:236692-236807:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:234860-234996:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:233605-233711:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232159-233249:-1:exon

baz1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: baz1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase BAZ1B isoform X2
translation: MAPLLGRKPYPLVKPLAEPPGPEELVYTIEHTKEAFRNKEEYEARLQRYSERIWTCKSTGSNQLTHKEAWEEEQEVTELLKEEYPPWFEKPVLEMVHHNTISLDKLVDQAWVEILTKYAVDEECDFLVGKDRSLRVKVVKVHPLEKPEEDSAEKKLEGACDSPSSDKENSSQENQTKEPPGKEEENRRESLCDRARRSPRKLPTSLKEEKKKWVMPKFLPHKYDVRLITEDKVISNVPADSLFRTERPPNKEIMRYFIRHNALRLGTGESAPWVVEDELVKKYSLPSKFSDFLLDPYKYMTHNPSTKRKSLSSPDRKPSKKLKTAESGGDSDVLKEKGDKEKKKRKKNPLAPPLSPTLWSHVQMKKVNGSPLKVKNSGTPKKPSSDGEEENLDEVIIVNKLGSSLSMGGKKGSKTNKKPREKKPKDGKQAKSKKSGAKVLNGQKASKKEGKGAKKPKMKQMTLLDMTKSSPSRSPQKRPKSSAGGTPKLGKPLPPMALHLLRYYKENKGKEDKKSALSSLISKAAKVLSPEDRGRLPEELRDLVQKRWELLEHKRRWAAMSEEEKQDVLRKKREEIKEKLRERAKERREKEMLERREKLRRYEDQELTGKSLPNFKLVDMPEGLPNALFGDVAMVADFLSCYSGLLMPDDQYPITAMALMEALVADKGGFLYLNRVLVILLQTLLQDELAEGYSELDMVLSEIPLTLHSVSELVRLCLRPWDAQEESAQGSEEWALGGFDDVVSNEFLEKLETAEVFELTSQEKVSLLVALCHRILMTYSVEDHMEAMQQHSAELWKERLATLKEVNDRKRAEKQRRKEQMEAKGAAEGWVKVEGGGSATPVSSAAKPEKKKSQTSEKKEAGKGKAEPPPAEPEPEDMISTVKSRRLMAIQAKKEKEEQERQNRERMEKEAEEERIRKQKAAAERAFQEGITKAKLVMRRLPLGTDRNHNRYWLFSDVVPGLYIEKGWVHDSIEYSFTLPPEEVKKEELDTEGEVEKEEEDGTESTLSEAGQQGALANPETCIETTVPKQGQNLWFLCDTQRELDELIDSLHPQGVRESELKSQLQARYQEVVHSIYLARRPNLGLKTCDGHHELLKFLRSDIIEVASRLQKGGLGYMDDTSEFEERVRSLENLKDFGECIITLQASVIKKFLQGFMAPKQKKKRKQGGEESSKAEEVDEEKRLAEEARVATAVEKWKTMIREAQTFSRVHVLLGMLDACIKWDMSAENARCKVCRRKGEDDKLILCDECNKAFHLFCLRPALYSIPDGEWLCPACQPAMARRCSRGRNYNEETEEEDEEEEEDNEEEEDEEEEVSDDEDRPIGLSLRSRKAAKGKQCPRLKQGGKAAATKKPSPRSGRQKGLSSPADIDELVRQSSRQGISRQALELEKCEEILCKLVKFRYSWPFREPVSPEEAEDYLDVISQPMDFQTMLRKCAAGQYRNGCDFLEDMKLVFSNAEEYNQPGSTVLSCLAKTEQCFTDLLHKLLPGLSYLRRRPRKRGGRDPAQGEEQESEAEAEAELGRRARHSKHSRADRGEGEESGRKARQSRRKASEEESEEEEEACVGRRKSQRAAATSGRKDYREQDSDSEQEGSRWRRAAARRSSKLEQDDEEEEEEEGSGEEEEEQESRRTRYGKRGAQGDSSDEDRGSQRHSKRQKRTV
SIO_010081: baz1b
subclass of: SO_0000673
so part of: baz1b
location: complement(join(232487..233249,233605..233711,234860..234996,236692..236807,237227..237374,238603..238750,239183..239368,239665..239842,240382..240480,241275..241395,241668..241798,242311..242449,242739..244362,244691..244885,245038..245235,245757..245878,246033..246225,246396..246540,247606..247722,250070..250188))
location: region:232487-250188:-1
so has part: feature:250070-250188:-1:exon
so has part: feature:247606-247722:-1:exon
so has part: feature:246396-246540:-1:exon
so has part: feature:246033-246225:-1:exon
so has part: feature:245757-245878:-1:exon
so has part: feature:245038-245235:-1:exon
so has part: feature:244691-244885:-1:exon
so has part: feature:242739-244362:-1:exon
so has part: feature:242311-242449:-1:exon
so has part: feature:241668-241798:-1:exon
so has part: feature:241275-241395:-1:exon
so has part: feature:240382-240480:-1:exon
so has part: feature:239665-239842:-1:exon
so has part: feature:239183-239368:-1:exon
so has part: feature:238603-238750:-1:exon
so has part: feature:237227-237374:-1:exon
so has part: feature:236692-236807:-1:exon
so has part: feature:234860-234996:-1:exon
so has part: feature:233605-233711:-1:exon
so has part: feature:232487-233249:-1:exon

XP_015223247.1
type: Protein
SIO_000068: ncbiprotein

position:232487:-1
position: 232487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250188:-1
position: 250188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250070-250188:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247606-247722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:246396-246540:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246033-246225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245757-245878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:245038-245235:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244691-244885:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:242739-244362:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242311-242449:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:241668-241798:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:241275-241395:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:240382-240480:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239665-239842:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:239183-239368:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:238603-238750:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:237227-237374:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:236692-236807:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:234860-234996:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:233605-233711:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:232487-233249:-1:exon

baz1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: baz1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase BAZ1B isoform X1
translation: MAPLLGRKPYPLVKPLAEPPGPEELVYTIEHTKEAFRNKEEYEARLQRYSERIWTCKSTGSNQLTHKEAWEEEQEVTELLKEEYPPWFEKPVLEMVHHNTISLDKLVDQAWVEILTKYAVDEECDFLVGKDRSLRVKVVKVHPLEKPEEDSAEKKLEGACDSPSSDKENSSQENQTKEPPGKEEENRRESLCDRARRSPRKLPTSLKEEKKKWVMPKFLPHKYDVRLITEDKVISNVPADSLFRTERPPNKEIMRYFIRHNALRLGTGESAPWVVEDELVKKYSLPSKFSDFLLDPYKYMTHNPSTKRKSLSSPDRKPSKKLKTAESGGDSDVLKEKGDKEKKKRKKNPLAPPLSPTLWSHVQMKKVNGSPLKVKNSGTPKKPSSDGEEENLDEVIIVNKLGSSLSMGGKKGSKTNKKPREKKPKDGKQAKSKKSGAKVLNGQKASKKEGKGAKKPKMKQMTLLDMTKSSPSRSPQKRPKSSAGGTPKLGKPLPPMALHLLRYYKENKGKEDKKSALSSLISKAAKVLSPEDRGRLPEELRDLVQKRWELLEHKRRWAAMSEEEKQDVLRKKREEIKEKLRERAKERREKEMLERREKLRRYEDQELTGKSLPNFKLVDMPEGLPNALFGDVAMVADFLSCYSGLLMPDDQYPITAMALMEALVADKGGFLYLNRVLVILLQTLLQDELAEGYSELDMVLSEIPLTLHSVSELVRLCLRPWDAQEESAQGSEEWALGGFDDVVSNEFLEKLETAEVFELTSQEKVSLLVALCHRILMTYSVEDHMEAMQQHSAELWKERLATLKEVNDRKRAEKQRRKEQMEAKGAAEGWVKVEGGGSATPVSSAAKPEKKKSQTSEKKEAGKGKAEPPPAEPEPEDMISTVKSRRLMAIQAKKEKEEQERQNRERMEKEAEEERIRKQKAAAERAFQEGITKAKLVMRRLPLGTDRNHNRYWLFSDVVPGLYIEKGWVHDSIEYSFTLPPEEVKKEELDTEGEVEKEEEDGTESTLSEAGQQGALANPETCIETTVPKQGQNLWFLCDTQRELDELIDSLHPQGVRESELKSQLQARYQEVVHSIYLARRPNLGLKTCDGHHELLKFLRSDIIEVASRLQKGGLGYMDDTSEFEERVRSLENLKDFGECIITLQASVIKKFLQGFMAPKQKKKRKQGGEESSKAEEVDEEKRLAEEARVATAVEKWKTMIREAQTFSRVHVLLGMLDACIKWDMSAENARCKVCRRKGCRKSPAQPSLARSSAPRSIHRLRFSVREAVVHLEPCVLDRPAAVRVGGRGRPEKGAKKQGEDDKLILCDECNKAFHLFCLRPALYSIPDGEWLCPACQPAMARRCSRGRNYNEETEEEDEEEEEDNEEEEDEEEEVSDDEDRPIGLSLRSRKAAKGKQCPRLKQGGKAAATKKPSPRSGRQKGLSSPADIDELVRQSSRQGISRQALELEKCEEILCKLVKFRYSWPFREPVSPEEAEDYLDVISQPMDFQTMLRKCAAGQYRNGCDFLEDMKLVFSNAEEYNQPGSTVLSCLAKTEQCFTDLLHKLLPGLSYLRRRPRKRGGRDPAQGEEQESEAEAEAELGRRARHSKHSRADRGEGEESGRKARQSRRKASEEESEEEEEACVGRRKSQRAAATSGRKDYREQDSDSEQEGSRWRRAAARRSSKLEQDDEEEEEEEGSGEEEEEQESRRTRYGKRGAQGDSSDEDRGSQRHSKRQKRTV
SIO_010081: baz1b
subclass of: SO_0000673
so part of: baz1b
location: complement(join(232487..233249,233605..233711,234860..234996,236692..236807,237227..237374,237866..238045,238603..238750,239183..239368,239665..239842,240382..240480,241275..241395,241668..241798,242311..242449,242739..244362,244691..244885,245038..245235,245757..245878,246033..246225,246396..246540,247606..247722,250070..250188))
location: region:232487-250188:-1
so has part: feature:250070-250188:-1:exon
so has part: feature:247606-247722:-1:exon
so has part: feature:246396-246540:-1:exon
so has part: feature:246033-246225:-1:exon
so has part: feature:245757-245878:-1:exon
so has part: feature:245038-245235:-1:exon
so has part: feature:244691-244885:-1:exon
so has part: feature:242739-244362:-1:exon
so has part: feature:242311-242449:-1:exon
so has part: feature:241668-241798:-1:exon
so has part: feature:241275-241395:-1:exon
so has part: feature:240382-240480:-1:exon
so has part: feature:239665-239842:-1:exon
so has part: feature:239183-239368:-1:exon
so has part: feature:238603-238750:-1:exon
so has part: feature:237866-238045:-1:exon
so has part: feature:237227-237374:-1:exon
so has part: feature:236692-236807:-1:exon
so has part: feature:234860-234996:-1:exon
so has part: feature:233605-233711:-1:exon
so has part: feature:232487-233249:-1:exon

XP_015223246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250070-250188:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247606-247722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:246396-246540:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246033-246225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245757-245878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:245038-245235:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244691-244885:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:242739-244362:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242311-242449:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:241668-241798:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:241275-241395:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:240382-240480:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239665-239842:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:239183-239368:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:238603-238750:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:237866-238045:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:237227-237374:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:236692-236807:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:234860-234996:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:233605-233711:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:232487-233249:-1:exon

mks1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: mks1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(252385..263441)
location: region:252385-263441:-1
so has part: feature:252385-263441:-1:exon
subclass of: SO_0000010

102686035
type: Gene
SIO_000068: ncbigene

position:252385:-1
position: 252385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263441:-1
position: 263441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252385-263441:-1:exon

mks1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mks1
product: Meckel syndrome, type 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015367872.1
SIO_010081: mks1
subclass of: SO_0000673
so part of: mks1
location: complement(join(252385..252820,253833..253930,254534..254616,255156..255289,255679..255786,256084..256153,256657..256727,257205..257267,258637..258679,258991..259047,259240..259348,259642..259746,260345..260473,261085..261182,261352..261507,262064..262125,262562..262683,263280..263441))
location: region:252385-263441:-1
so has part: feature:263280-263441:-1:exon
so has part: feature:262562-262683:-1:exon
so has part: feature:262064-262125:-1:exon
so has part: feature:261352-261507:-1:exon
so has part: feature:261085-261182:-1:exon
so has part: feature:260345-260473:-1:exon
so has part: feature:259642-259746:-1:exon
so has part: feature:259240-259348:-1:exon
so has part: feature:258991-259047:-1:exon
so has part: feature:258637-258679:-1:exon
so has part: feature:257205-257267:-1:exon
so has part: feature:256657-256727:-1:exon
so has part: feature:256084-256153:-1:exon
so has part: feature:255679-255786:-1:exon
so has part: feature:255156-255289:-1:exon
so has part: feature:254534-254616:-1:exon
so has part: feature:253833-253930:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:263280-263441:-1:exon

position:263280:-1
position: 263280
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:262562-262683:-1:exon

position:262562:-1
position: 262562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262683:-1
position: 262683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:262064-262125:-1:exon

position:262064:-1
position: 262064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262125:-1
position: 262125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:261352-261507:-1:exon

position:261352:-1
position: 261352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261507:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:261085-261182:-1:exon

position:261085:-1
position: 261085
reference: sequence
type: ReverseStrandPosition
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position:261182:-1
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:260345-260473:-1:exon

position:260345:-1
position: 260345
reference: sequence
type: ReverseStrandPosition
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position:260473:-1
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:259642-259746:-1:exon

position:259642:-1
position: 259642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259746:-1
position: 259746
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:259240-259348:-1:exon

position:259240:-1
position: 259240
reference: sequence
type: ReverseStrandPosition
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position:259348:-1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:258991-259047:-1:exon

position:258991:-1
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reference: sequence
type: ReverseStrandPosition
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position:259047:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:258637-258679:-1:exon

position:258637:-1
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reference: sequence
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position:258679:-1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:257205-257267:-1:exon

position:257205:-1
position: 257205
reference: sequence
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position:257267:-1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:256657-256727:-1:exon

position:256657:-1
position: 256657
reference: sequence
type: ReverseStrandPosition
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position:256727:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:256084-256153:-1:exon

position:256084:-1
position: 256084
reference: sequence
type: ReverseStrandPosition
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position:256153:-1
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reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:255679-255786:-1:exon

position:255679:-1
position: 255679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255786:-1
position: 255786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:255156-255289:-1:exon

position:255156:-1
position: 255156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255289:-1
position: 255289
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:254534-254616:-1:exon

position:254534:-1
position: 254534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254616:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:253833-253930:-1:exon

position:253833:-1
position: 253833
reference: sequence
type: ReverseStrandPosition
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position:253930:-1
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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:252385-252820:-1:exon

position:252820:-1
position: 252820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mks1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mks1
product: Meckel syndrome, type 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015367871.1
SIO_010081: mks1
subclass of: SO_0000673
so part of: mks1
location: complement(join(252385..252820,253833..253930,254534..254616,255156..255289,255679..255786,256084..256153,256657..256727,257205..257267,258637..258679,258991..259047,259240..259348,259642..259746,260345..260473,261085..261182,261352..261507,262064..262128,262562..262683,263280..263441))
location: region:252385-263441:-1
so has part: feature:263280-263441:-1:exon
so has part: feature:262562-262683:-1:exon
so has part: feature:262064-262128:-1:exon
so has part: feature:261352-261507:-1:exon
so has part: feature:261085-261182:-1:exon
so has part: feature:260345-260473:-1:exon
so has part: feature:259642-259746:-1:exon
so has part: feature:259240-259348:-1:exon
so has part: feature:258991-259047:-1:exon
so has part: feature:258637-258679:-1:exon
so has part: feature:257205-257267:-1:exon
so has part: feature:256657-256727:-1:exon
so has part: feature:256084-256153:-1:exon
so has part: feature:255679-255786:-1:exon
so has part: feature:255156-255289:-1:exon
so has part: feature:254534-254616:-1:exon
so has part: feature:253833-253930:-1:exon
so has part: feature:252385-252820:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263280-263441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262562-262683:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262064-262128:-1:exon

position:262128:-1
position: 262128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:261352-261507:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:261085-261182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:260345-260473:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:259642-259746:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259240-259348:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:258991-259047:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:258637-258679:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:257205-257267:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:256657-256727:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:256084-256153:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:255679-255786:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:255156-255289:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:254534-254616:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:253833-253930:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:252385-252820:-1:exon

mks1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mks1
product: Meckel syndrome, type 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015367873.1
SIO_010081: mks1
subclass of: SO_0000673
so part of: mks1
location: complement(join(252385..252820,253833..253930,254534..254616,255156..255289,255679..255786,256084..256153,256657..256727,257205..257267,258637..258679,258991..259047,259240..259348,259642..259746,260345..260473,261085..261177,261352..261507,262064..262125))
location: region:252385-262125:-1
so has part: feature:262064-262125:-1:exon
so has part: feature:261352-261507:-1:exon
so has part: feature:261085-261177:-1:exon
so has part: feature:260345-260473:-1:exon
so has part: feature:259642-259746:-1:exon
so has part: feature:259240-259348:-1:exon
so has part: feature:258991-259047:-1:exon
so has part: feature:258637-258679:-1:exon
so has part: feature:257205-257267:-1:exon
so has part: feature:256657-256727:-1:exon
so has part: feature:256084-256153:-1:exon
so has part: feature:255679-255786:-1:exon
so has part: feature:255156-255289:-1:exon
so has part: feature:254534-254616:-1:exon
so has part: feature:253833-253930:-1:exon
so has part: feature:252385-252820:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:262064-262125:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:261352-261507:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261085-261177:-1:exon

position:261177:-1
position: 261177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:260345-260473:-1:exon

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SIO_000300: 5
SIO_000628: feature:259642-259746:-1:exon

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SIO_000300: 7
SIO_000628: feature:258991-259047:-1:exon

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SIO_000300: 8
SIO_000628: feature:258637-258679:-1:exon

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SIO_000300: 9
SIO_000628: feature:257205-257267:-1:exon

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SIO_000300: 10
SIO_000628: feature:256657-256727:-1:exon

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SIO_000300: 11
SIO_000628: feature:256084-256153:-1:exon

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SIO_000300: 12
SIO_000628: feature:255679-255786:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255156-255289:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:254534-254616:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:253833-253930:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:252385-252820:-1:exon

mks1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mks1
product: Meckel syndrome, type 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_015367874.1
SIO_010081: mks1
subclass of: SO_0000673
so part of: mks1
location: complement(join(252385..252820,253833..253930,254534..254616,255156..255289,255679..255786,256084..256153,256657..256727,257205..257267,258637..258679,258991..259047,259240..259348,259642..259746,260345..260473,261085..261177,261352..261507,262041..262095))
location: region:252385-262095:-1
so has part: feature:262041-262095:-1:exon
so has part: feature:261352-261507:-1:exon
so has part: feature:261085-261177:-1:exon
so has part: feature:260345-260473:-1:exon
so has part: feature:259642-259746:-1:exon
so has part: feature:259240-259348:-1:exon
so has part: feature:258991-259047:-1:exon
so has part: feature:258637-258679:-1:exon
so has part: feature:257205-257267:-1:exon
so has part: feature:256657-256727:-1:exon
so has part: feature:256084-256153:-1:exon
so has part: feature:255679-255786:-1:exon
so has part: feature:255156-255289:-1:exon
so has part: feature:254534-254616:-1:exon
so has part: feature:253833-253930:-1:exon
so has part: feature:252385-252820:-1:exon

position:262095:-1
position: 262095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262041-262095:-1:exon

position:262041:-1
position: 262041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:261352-261507:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261085-261177:-1:exon

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SIO_000300: 4
SIO_000628: feature:260345-260473:-1:exon

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SIO_000300: 5
SIO_000628: feature:259642-259746:-1:exon

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SIO_000300: 6
SIO_000628: feature:259240-259348:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258991-259047:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:258637-258679:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257205-257267:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256657-256727:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256084-256153:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:255679-255786:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255156-255289:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:254534-254616:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:253833-253930:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:252385-252820:-1:exon

mks1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mks1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Meckel syndrome type 1 protein isoform X2
translation: MAEGWSVDTGEGVYRSRDPVENLKIRVRLQRITSPTVFSQQLQQQASALQEKGLIELLTFSAQASSGGQQDDKEDVTVGWQEKLFSQSEVALLQTEAACRSPLERQYHAEIAALERAGGRASRRIFTYTDCDLLSGEMEHSLPVLNPDWAAPTLLAERMAHVRHRRQERRPVEGSVPKSRTVTWEPTEDFVKNNHVINTPVQTMHIMADLGPSGALGRRANERVLCTVRVDASGVVTVKPDFNNSRGPYRLEMEGQRRERWQYSLEDASRTIGPEEREREQRVFRDLYTRHREYLNSLVGQDFEMPPPGILRLLVNGEIVSAKGYEYDNLYVHFFFELPNDWSSLPSQSLSGVTQTCRTRTVGRENAAFFSYPFNFEAFFRKEDETEDSVPQWPVLYFEVLSLDFWQRYRNEGYGYVVMPATPGHHTVTCTTWRPVRMGTVAELRRFFIGGAPELEDVSYVRVPGTFKGERLSRFGFRSETTGRVTFALHCIQHSRAFIDASALRKRRQSVLDQLGGFSQQGSIYNVLEAFQRARRRMQEARESLPSDLINTTAPPASESTA
SIO_010081: mks1
subclass of: SO_0000673
so part of: mks1
location: complement(join(252717..252820,253833..253930,254534..254616,255156..255289,255679..255786,256084..256153,256657..256727,257205..257267,258637..258679,258991..259047,259240..259348,259642..259746,260345..260473,261085..261182,261352..261507,262064..262125,262562..262683,263280..263356))
location: region:252717-263356:-1
so has part: feature:263280-263356:-1:exon
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so has part: feature:261352-261507:-1:exon
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so has part: feature:256084-256153:-1:exon
so has part: feature:255679-255786:-1:exon
so has part: feature:255156-255289:-1:exon
so has part: feature:254534-254616:-1:exon
so has part: feature:253833-253930:-1:exon
so has part: feature:252717-252820:-1:exon

XP_015223358.1
type: Protein
SIO_000068: ncbiprotein

position:252717:-1
position: 252717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263356:-1
position: 263356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263280-263356:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262562-262683:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262064-262125:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:261352-261507:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:261085-261182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:260345-260473:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:259642-259746:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259240-259348:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:258991-259047:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:258637-258679:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:257205-257267:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:256657-256727:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:256084-256153:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:255679-255786:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:255156-255289:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:254534-254616:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:253833-253930:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:252717-252820:-1:exon

mks1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mks1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Meckel syndrome type 1 protein isoform X1
translation: MAEGWSVDTGEGVYRSRDPVENLKIRVRLQRITSPTVFSQQLQQQASALQEKGLIELLTFSAQASSAGGQQDDKEDVTVGWQEKLFSQSEVALLQTEAACRSPLERQYHAEIAALERAGGRASRRIFTYTDCDLLSGEMEHSLPVLNPDWAAPTLLAERMAHVRHRRQERRPVEGSVPKSRTVTWEPTEDFVKNNHVINTPVQTMHIMADLGPSGALGRRANERVLCTVRVDASGVVTVKPDFNNSRGPYRLEMEGQRRERWQYSLEDASRTIGPEEREREQRVFRDLYTRHREYLNSLVGQDFEMPPPGILRLLVNGEIVSAKGYEYDNLYVHFFFELPNDWSSLPSQSLSGVTQTCRTRTVGRENAAFFSYPFNFEAFFRKEDETEDSVPQWPVLYFEVLSLDFWQRYRNEGYGYVVMPATPGHHTVTCTTWRPVRMGTVAELRRFFIGGAPELEDVSYVRVPGTFKGERLSRFGFRSETTGRVTFALHCIQHSRAFIDASALRKRRQSVLDQLGGFSQQGSIYNVLEAFQRARRRMQEARESLPSDLINTTAPPASESTA
SIO_010081: mks1
subclass of: SO_0000673
so part of: mks1
location: complement(join(252717..252820,253833..253930,254534..254616,255156..255289,255679..255786,256084..256153,256657..256727,257205..257267,258637..258679,258991..259047,259240..259348,259642..259746,260345..260473,261085..261182,261352..261507,262064..262128,262562..262683,263280..263356))
location: region:252717-263356:-1
so has part: feature:263280-263356:-1:exon
so has part: feature:262562-262683:-1:exon
so has part: feature:262064-262128:-1:exon
so has part: feature:261352-261507:-1:exon
so has part: feature:261085-261182:-1:exon
so has part: feature:260345-260473:-1:exon
so has part: feature:259642-259746:-1:exon
so has part: feature:259240-259348:-1:exon
so has part: feature:258991-259047:-1:exon
so has part: feature:258637-258679:-1:exon
so has part: feature:257205-257267:-1:exon
so has part: feature:256657-256727:-1:exon
so has part: feature:256084-256153:-1:exon
so has part: feature:255679-255786:-1:exon
so has part: feature:255156-255289:-1:exon
so has part: feature:254534-254616:-1:exon
so has part: feature:253833-253930:-1:exon
so has part: feature:252717-252820:-1:exon

XP_015223357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263280-263356:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262562-262683:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262064-262128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:261352-261507:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:261085-261182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:260345-260473:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:259642-259746:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259240-259348:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:258991-259047:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:258637-258679:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:257205-257267:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:256657-256727:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:256084-256153:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:255679-255786:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:255156-255289:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:254534-254616:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:253833-253930:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:252717-252820:-1:exon

mks1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mks1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Meckel syndrome type 1 protein isoform X3
translation: MLRSLLWRGQGGGPAAGSSPTPTATCCPGRWSLPVLNPDWAAPTLLAERMAHVRHRRQERRPVEGSVPKSRTVTWEPTEDFVKNNHVINTPVQTMHIMADLGPSGALGRRANERVLCTVRVDASGVVTVKPDFNNSRGPYRLEMEGQRRERWQYSLEDASRTIGPEEREREQRVFRDLYTRHREYLNSLVGQDFEMPPPGILRLLVNGEIVSAKGYEYDNLYVHFFFELPNDWSSLPSQSLSGVTQTCRTRTVGRENAAFFSYPFNFEAFFRKEDETEDSVPQWPVLYFEVLSLDFWQRYRNEGYGYVVMPATPGHHTVTCTTWRPVRMGTVAELRRFFIGGAPELEDVSYVRVPGTFKGERLSRFGFRSETTGRVTFALHCIQHSRAFIDASALRKRRQSVLDQLGGFSQQGSIYNVLEAFQRARRRMQEARESLPSDLINTTAPPASESTA
SIO_010081: mks1
subclass of: SO_0000673
so part of: mks1
location: complement(join(252717..252820,253833..253930,254534..254616,255156..255289,255679..255786,256084..256153,256657..256727,257205..257267,258637..258679,258991..259047,259240..259348,259642..259746,260345..260473,261085..261177,261352..261446))
location: region:252717-261446:-1
so has part: feature:261352-261446:-1:exon
so has part: feature:261085-261177:-1:exon
so has part: feature:260345-260473:-1:exon
so has part: feature:259642-259746:-1:exon
so has part: feature:259240-259348:-1:exon
so has part: feature:258991-259047:-1:exon
so has part: feature:258637-258679:-1:exon
so has part: feature:257205-257267:-1:exon
so has part: feature:256657-256727:-1:exon
so has part: feature:256084-256153:-1:exon
so has part: feature:255679-255786:-1:exon
so has part: feature:255156-255289:-1:exon
so has part: feature:254534-254616:-1:exon
so has part: feature:253833-253930:-1:exon
so has part: feature:252717-252820:-1:exon

XP_015223359.1
type: Protein
SIO_000068: ncbiprotein

position:261446:-1
position: 261446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261352-261446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:261085-261177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260345-260473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259642-259746:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259240-259348:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258991-259047:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258637-258679:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257205-257267:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:256657-256727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256084-256153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:255679-255786:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:255156-255289:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:254534-254616:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:253833-253930:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:252717-252820:-1:exon

mks1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mks1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Meckel syndrome type 1 protein isoform X3
translation: MLRSLLWRGQGGGPAAGSSPTPTATCCPGRWSLPVLNPDWAAPTLLAERMAHVRHRRQERRPVEGSVPKSRTVTWEPTEDFVKNNHVINTPVQTMHIMADLGPSGALGRRANERVLCTVRVDASGVVTVKPDFNNSRGPYRLEMEGQRRERWQYSLEDASRTIGPEEREREQRVFRDLYTRHREYLNSLVGQDFEMPPPGILRLLVNGEIVSAKGYEYDNLYVHFFFELPNDWSSLPSQSLSGVTQTCRTRTVGRENAAFFSYPFNFEAFFRKEDETEDSVPQWPVLYFEVLSLDFWQRYRNEGYGYVVMPATPGHHTVTCTTWRPVRMGTVAELRRFFIGGAPELEDVSYVRVPGTFKGERLSRFGFRSETTGRVTFALHCIQHSRAFIDASALRKRRQSVLDQLGGFSQQGSIYNVLEAFQRARRRMQEARESLPSDLINTTAPPASESTA
SIO_010081: mks1
subclass of: SO_0000673
so part of: mks1
location: complement(join(252717..252820,253833..253930,254534..254616,255156..255289,255679..255786,256084..256153,256657..256727,257205..257267,258637..258679,258991..259047,259240..259348,259642..259746,260345..260473,261085..261177,261352..261446))
location: region:252717-261446:-1
so has part: feature:261352-261446:-1:exon
so has part: feature:261085-261177:-1:exon
so has part: feature:260345-260473:-1:exon
so has part: feature:259642-259746:-1:exon
so has part: feature:259240-259348:-1:exon
so has part: feature:258991-259047:-1:exon
so has part: feature:258637-258679:-1:exon
so has part: feature:257205-257267:-1:exon
so has part: feature:256657-256727:-1:exon
so has part: feature:256084-256153:-1:exon
so has part: feature:255679-255786:-1:exon
so has part: feature:255156-255289:-1:exon
so has part: feature:254534-254616:-1:exon
so has part: feature:253833-253930:-1:exon
so has part: feature:252717-252820:-1:exon

XP_015223360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261352-261446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:261085-261177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260345-260473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259642-259746:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259240-259348:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258991-259047:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258637-258679:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257205-257267:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:256657-256727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256084-256153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:255679-255786:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:255156-255289:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:254534-254616:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:253833-253930:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:252717-252820:-1:exon

bcl7b
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: bcl7b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(264525..273304)
location: region:264525-273304:-1
so has part: feature:264525-273304:-1:exon
subclass of: SO_0000010

102694842
type: Gene
SIO_000068: ncbigene

position:264525:-1
position: 264525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273304:-1
position: 273304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264525-273304:-1:exon

bcl7b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: bcl7b
product: B-cell CLL/lymphoma 7B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_006640936.2
SIO_010081: bcl7b
subclass of: SO_0000673
so part of: bcl7b
location: complement(join(264525..268571,268776..268855,269251..269415,270707..270818,271569..271644,273113..273304))
location: region:264525-273304:-1
so has part: feature:273113-273304:-1:exon
so has part: feature:271569-271644:-1:exon
so has part: feature:270707-270818:-1:exon
so has part: feature:269251-269415:-1:exon
so has part: feature:268776-268855:-1:exon
so has part: feature:264525-268571:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273113-273304:-1:exon

position:273113:-1
position: 273113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:271569-271644:-1:exon

position:271569:-1
position: 271569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271644:-1
position: 271644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:270707-270818:-1:exon

position:270707:-1
position: 270707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270818:-1
position: 270818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:269251-269415:-1:exon

position:269251:-1
position: 269251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269415:-1
position: 269415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:268776-268855:-1:exon

position:268776:-1
position: 268776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268855:-1
position: 268855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:264525-268571:-1:exon

position:268571:-1
position: 268571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

bcl7b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: bcl7b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell CLL/lymphoma 7 protein family member B
translation: MSGRSVRAETRSRAKDDIKKVMAAIERVRRWEKKWVTVGDTSLRIFKWVPVVDTKEKEKCKTNGSAGRELKGYPVDTGDTASENNRSVLLDFQDDNSNQSSLSDMYQPKVDSSSNSSPQPSEPVSPAPTSDFRTDDSQPPTLGQETLEESSLQTCEVADEPPTLTKEDLLPLNAQVDEESPEAGAPPLKRVCTEQSSVLQPSTLS
SIO_010081: bcl7b
subclass of: SO_0000673
so part of: bcl7b
location: complement(join(268479..268571,268776..268855,269251..269415,270707..270818,271569..271644,273113..273204))
location: region:268479-273204:-1
so has part: feature:273113-273204:-1:exon
so has part: feature:271569-271644:-1:exon
so has part: feature:270707-270818:-1:exon
so has part: feature:269251-269415:-1:exon
so has part: feature:268776-268855:-1:exon
so has part: feature:268479-268571:-1:exon

XP_006640999.1
type: Protein
SIO_000068: ncbiprotein

position:268479:-1
position: 268479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273204:-1
position: 273204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273113-273204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271569-271644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270707-270818:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269251-269415:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268776-268855:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:268479-268571:-1:exon

tbl2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: tbl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(275231..281504)
location: region:275231-281504:-1
so has part: feature:275231-281504:-1:exon
subclass of: SO_0000010

102686240
type: Gene
SIO_000068: ncbigene

position:275231:-1
position: 275231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281504:-1
position: 281504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275231-281504:-1:exon

tbl2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: tbl2
product: transducin (beta)-like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006640799.2
SIO_010081: tbl2
subclass of: SO_0000673
so part of: tbl2
location: complement(join(275231..275862,276689..276841,277215..277341,278245..278396,279306..279490,279905..280026,281306..281504))
location: region:275231-281504:-1
so has part: feature:281306-281504:-1:exon
so has part: feature:279905-280026:-1:exon
so has part: feature:279306-279490:-1:exon
so has part: feature:278245-278396:-1:exon
so has part: feature:277215-277341:-1:exon
so has part: feature:276689-276841:-1:exon
so has part: feature:275231-275862:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281306-281504:-1:exon

position:281306:-1
position: 281306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:279905-280026:-1:exon

position:279905:-1
position: 279905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280026:-1
position: 280026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:279306-279490:-1:exon

position:279306:-1
position: 279306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279490:-1
position: 279490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:278245-278396:-1:exon

position:278245:-1
position: 278245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278396:-1
position: 278396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:277215-277341:-1:exon

position:277215:-1
position: 277215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277341:-1
position: 277341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:276689-276841:-1:exon

position:276689:-1
position: 276689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276841:-1
position: 276841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:275231-275862:-1:exon

position:275862:-1
position: 275862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tbl2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: tbl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin beta-like protein 2
translation: MELAALVAVSVLIGALVLLVAVALGKQRGGPKEEAEPREDAAAEKAEGEKHCASKRLKQQPRPRKERPQQHSFSHPLLASSLKGHSGNVTCLDFSSNGKYLASCADDRTVRIWSTKDFADRDHRCLRANVELDHATLVSFSPDSRAFITWLASAETIRVFKMLKKEDGSISFSAAPEDFPQKHKAPVINIGIAETGKFIMTASSDTTILIWDLKGEVLATINTNQMTNSYATISPCGRFVASCGFTPDVKVWEVCFGKMGDFREVVRAFDLKGHSAGVYSFAFSNDSRRMATVSKDGTWKLWDTDVEYKKQQDPYLLRTGQCQVAEPCRIALSPDARVAAISSGCNVALYSAAAGELEEELQGVHSEEIADMRFDINSRFLLTCGDRAIRVFHNAPGHRAAVREMQAMLKNASNEAMRQRLQLQIQEAQAALDSVCTPKD
SIO_010081: tbl2
subclass of: SO_0000673
so part of: tbl2
location: complement(join(275406..275862,276689..276841,277215..277341,278245..278396,279306..279490,279905..280026,281306..281432))
location: region:275406-281432:-1
so has part: feature:281306-281432:-1:exon
so has part: feature:279905-280026:-1:exon
so has part: feature:279306-279490:-1:exon
so has part: feature:278245-278396:-1:exon
so has part: feature:277215-277341:-1:exon
so has part: feature:276689-276841:-1:exon
so has part: feature:275406-275862:-1:exon

XP_006640862.1
type: Protein
SIO_000068: ncbiprotein

position:275406:-1
position: 275406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281432:-1
position: 281432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281306-281432:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279905-280026:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279306-279490:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278245-278396:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277215-277341:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276689-276841:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275406-275862:-1:exon

nsun5
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: nsun5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 281565..287450
location: region:281565-287450:1
so has part: feature:281565-287450:1:exon
subclass of: SO_0000010

102695036
type: Gene
SIO_000068: ncbigene

position:281565:1
position: 281565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287450:1
position: 287450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281565-287450:1:exon

nsun5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: nsun5
product: NOP2/Sun RNA methyltransferase family member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006640937.2
SIO_010081: nsun5
subclass of: SO_0000673
so part of: nsun5
location: join(281565..281901,282671..282790,282908..283079,283422..283530,283817..283955,284672..284787,284974..285152,285234..285441,285723..285884,286567..287450)
location: region:281565-287450:1
so has part: feature:281565-281901:1:exon
so has part: feature:282671-282790:1:exon
so has part: feature:282908-283079:1:exon
so has part: feature:283422-283530:1:exon
so has part: feature:283817-283955:1:exon
so has part: feature:284672-284787:1:exon
so has part: feature:284974-285152:1:exon
so has part: feature:285234-285441:1:exon
so has part: feature:285723-285884:1:exon
so has part: feature:286567-287450:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281565-281901:1:exon

position:281901:1
position: 281901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:282671-282790:1:exon

position:282671:1
position: 282671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282790:1
position: 282790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:282908-283079:1:exon

position:282908:1
position: 282908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283079:1
position: 283079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:283422-283530:1:exon

position:283422:1
position: 283422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283530:1
position: 283530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:283817-283955:1:exon

position:283817:1
position: 283817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283955:1
position: 283955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:284672-284787:1:exon

position:284672:1
position: 284672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284787:1
position: 284787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:284974-285152:1:exon

position:284974:1
position: 284974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285152:1
position: 285152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:285234-285441:1:exon

position:285234:1
position: 285234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285441:1
position: 285441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:285723-285884:1:exon

position:285723:1
position: 285723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285884:1
position: 285884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:286567-287450:1:exon

position:286567:1
position: 286567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nsun5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: nsun5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable 28S rRNA (cytosine-C(5))-methyltransferase
translation: MALYVKAAEVLEKAERKESSVKTLVYNSQFQNIKQLFALVSETLKYSAVLEEIISSTGLLKEKKLKMHVAKVLVYDLLFGRGLKCGGSWKVLLLRQQPRLQAALARLKVRRKVCRNEDLLCAAGRDAAEDVVPRYVRVNTLKTNVEDVIDYLKRDGFSYLGQASRLEDLRRLSGKNFIGDLHLPELLVFPPRTDFHSHFLYQAGHIILQDKASCLPACLLQPPPGAHVLDACAAPGNKTSHLAALLGNKGKLFAFDLDPKRLATMSTLLLRAGVTCQELAAQDFLKVDPDDPKYGRVEYLLLDPSCSGSGMAGRRGERVAPEEEERRLQALAGFQLRCLRHALRFPSLRRLVYSTCSTHAQENEEVVQACLQEHGASYRLVPLLPSWQERGHAPLSQCLRASPSETLTHGFFVAMLERRGPGEEQEEQGRCSLPAASVTSSAAPPDSEAGEEPQQRAAAAETQTVGAKTRRKRKKKRRPAAQGD
SIO_010081: nsun5
subclass of: SO_0000673
so part of: nsun5
location: join(281809..281901,282671..282790,282908..283079,283422..283530,283817..283955,284672..284787,284974..285152,285234..285441,285723..285884,286567..286723)
location: region:281809-286723:1
so has part: feature:281809-281901:1:exon
so has part: feature:282671-282790:1:exon
so has part: feature:282908-283079:1:exon
so has part: feature:283422-283530:1:exon
so has part: feature:283817-283955:1:exon
so has part: feature:284672-284787:1:exon
so has part: feature:284974-285152:1:exon
so has part: feature:285234-285441:1:exon
so has part: feature:285723-285884:1:exon
so has part: feature:286567-286723:1:exon

XP_006641000.1
type: Protein
SIO_000068: ncbiprotein

position:281809:1
position: 281809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286723:1
position: 286723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281809-281901:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282671-282790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282908-283079:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283422-283530:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283817-283955:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284672-284787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284974-285152:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285234-285441:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:285723-285884:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286567-286723:1:exon

pom121
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: pom121
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(287833..302907)
location: region:287833-302907:-1
so has part: feature:287833-302907:-1:exon
subclass of: SO_0000010

102695232
type: Gene
SIO_000068: ncbigene

position:287833:-1
position: 287833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302907:-1
position: 302907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287833-302907:-1:exon

pom121
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: pom121
product: POM121 transmembrane nucleoporin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015367302.1
SIO_010081: pom121
subclass of: SO_0000673
so part of: pom121
location: complement(join(287833..292699,293010..293117,294097..294601,294824..295467,295609..295905,296938..297037,297592..297716,298068..298147,298690..298781,299423..299597,299720..299800,300029..300196,301223..301438,301850..302907))
location: region:287833-302907:-1
so has part: feature:301850-302907:-1:exon
so has part: feature:301223-301438:-1:exon
so has part: feature:300029-300196:-1:exon
so has part: feature:299720-299800:-1:exon
so has part: feature:299423-299597:-1:exon
so has part: feature:298690-298781:-1:exon
so has part: feature:298068-298147:-1:exon
so has part: feature:297592-297716:-1:exon
so has part: feature:296938-297037:-1:exon
so has part: feature:295609-295905:-1:exon
so has part: feature:294824-295467:-1:exon
so has part: feature:294097-294601:-1:exon
so has part: feature:293010-293117:-1:exon
so has part: feature:287833-292699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:301850-302907:-1:exon

position:301850:-1
position: 301850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301223-301438:-1:exon

position:301223:-1
position: 301223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301438:-1
position: 301438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:300029-300196:-1:exon

position:300029:-1
position: 300029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300196:-1
position: 300196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:299720-299800:-1:exon

position:299720:-1
position: 299720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299800:-1
position: 299800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:299423-299597:-1:exon

position:299423:-1
position: 299423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299597:-1
position: 299597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:298690-298781:-1:exon

position:298690:-1
position: 298690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298781:-1
position: 298781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:298068-298147:-1:exon

position:298068:-1
position: 298068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298147:-1
position: 298147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:297592-297716:-1:exon

position:297592:-1
position: 297592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297716:-1
position: 297716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:296938-297037:-1:exon

position:296938:-1
position: 296938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297037:-1
position: 297037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:295609-295905:-1:exon

position:295609:-1
position: 295609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295905:-1
position: 295905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:294824-295467:-1:exon

position:294824:-1
position: 294824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295467:-1
position: 295467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:294097-294601:-1:exon

position:294097:-1
position: 294097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294601:-1
position: 294601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:293010-293117:-1:exon

position:293010:-1
position: 293010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293117:-1
position: 293117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:287833-292699:-1:exon

position:292699:-1
position: 292699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pom121
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: pom121
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear envelope pore membrane protein POM 121
translation: MSPREKRRIALISVALLAVAIFCFALYYIPTFLYVLFILGVCTVACFCHAGGPSQHTRLGPQPRPALAIPPALRRWLPGKTANGVPSAGRVSSRGHQGRPGKGELGDSAAPRGERRWEVRGAFQKEAEGGGNGSFVFSPRDLLMGSYLSKADSPGAGGASRELRERLARPNHAVHTPNRRLSFGDSLGAAGRFSITPQRHYPLQQPGCPSLGPLPPVQWDGCRRKNVLTPRNSPAARSPVTVKIARPEPSRTRSPLFDRLSSPLTALAPGLGASVDPCSKEAVLTALKEGRKREVEEEEGRSCSEGQESKRRRHDSSGSAHSAFEPLLANGVPSQLVPKPGTLKRGANALLTEETLMKRSRTSSVSSLSSGLAPSGVLGSARNPILSSYSSSRGCLQQKKTPALSLSPLSSPGSSRSQTPERPTKKLREEEAFSSTFLSAAKSDTTPKSQARETEKPSPAPTVPVAPSSPASRAAEGKRKRKIQLVSSRRGDSITLPPPPELGYSITVSDLDSEKKAALHRIRKVLEEPEPAKPTPAPAVPLFSQAAVSASSPLGTASLLLYTSTAGAPTPPSVSIAAPASNPGMASIPPSSSSSSGVAPASSTAASPLLESLRKMQNSPALSTAPNTGSPAAGAETPKAPVVTFSMSSPPVLASSILGAAPVKTEPGPAPAQLPQPAASASQPSATPAAPPAASSGSQTGALSFGLASTAQPMAALSFATTTTTSAPNAKPLLSAFKPVFGAPAPAVTSSSAATTFKPVFGGSTASSAFGQPVGTTGGAATTSSATAATSAASIFTGLSASTSAPASGTQTPAKPAFGSWGAGASGSTAAPASTAGGAFQFAGPAASQATFAFGKPSFDGPATFGSAAPAAAAKPFTFGASGAAGATPFSFGGATTTTAAPSFGTPSQPAFGSGSTGFSFGTTTAAAAAPAFGSTTQTSAPLPVPTPSFSFGAAASAQASAPPASQGAPQPTAGFSFGAGLSSAQFAAPAAPSPAFSFGASNAKDSKPAFGTPTPAFGQSSSGGPLPFGSPGTPAPGFGGLTSTPFGATPGASFSIGSGSKSSARQRLQARRQHPRKK
SIO_010081: pom121
subclass of: SO_0000673
so part of: pom121
location: complement(join(292602..292699,293010..293117,294097..294601,294824..295467,295609..295905,296938..297037,297592..297716,298068..298147,298690..298781,299423..299597,299720..299800,300029..300196,301223..301438,301850..302400))
location: region:292602-302400:-1
so has part: feature:301850-302400:-1:exon
so has part: feature:301223-301438:-1:exon
so has part: feature:300029-300196:-1:exon
so has part: feature:299720-299800:-1:exon
so has part: feature:299423-299597:-1:exon
so has part: feature:298690-298781:-1:exon
so has part: feature:298068-298147:-1:exon
so has part: feature:297592-297716:-1:exon
so has part: feature:296938-297037:-1:exon
so has part: feature:295609-295905:-1:exon
so has part: feature:294824-295467:-1:exon
so has part: feature:294097-294601:-1:exon
so has part: feature:293010-293117:-1:exon
so has part: feature:292602-292699:-1:exon

XP_015222788.1
type: Protein
SIO_000068: ncbiprotein

position:292602:-1
position: 292602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302400:-1
position: 302400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301850-302400:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301223-301438:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:300029-300196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299720-299800:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299423-299597:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:298690-298781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:298068-298147:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:297592-297716:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:296938-297037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:295609-295905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:294824-295467:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:294097-294601:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:293010-293117:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:292602-292699:-1:exon

hip1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: hip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 306251..353692
location: region:306251-353692:1
so has part: feature:306251-353692:1:exon
subclass of: SO_0000010

102695425
type: Gene
SIO_000068: ncbigene

position:306251:1
position: 306251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353692:1
position: 353692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306251-353692:1:exon

hip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: hip1
product: huntingtin interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015367688.1
SIO_010081: hip1
subclass of: SO_0000673
so part of: hip1
location: join(306251..306484,323884..323947,324254..324396,325309..325365,329112..329192,330449..330525,330773..330834,332196..332336,333228..333285,333687..333762,334786..334929,335276..335370,336179..336251,337075..337258,339313..339401,339828..339944,340625..340726,340921..341115,341821..341968,342155..342241,342343..342450,342824..342960,343072..343182,343770..343828,344725..344818,345289..345389,345804..345909,346970..347093,347941..348002,348424..348538,348919..353692)
location: region:306251-353692:1
so has part: feature:306251-306484:1:exon
so has part: feature:323884-323947:1:exon
so has part: feature:324254-324396:1:exon
so has part: feature:325309-325365:1:exon
so has part: feature:329112-329192:1:exon
so has part: feature:330449-330525:1:exon
so has part: feature:330773-330834:1:exon
so has part: feature:332196-332336:1:exon
so has part: feature:333228-333285:1:exon
so has part: feature:333687-333762:1:exon
so has part: feature:334786-334929:1:exon
so has part: feature:335276-335370:1:exon
so has part: feature:336179-336251:1:exon
so has part: feature:337075-337258:1:exon
so has part: feature:339313-339401:1:exon
so has part: feature:339828-339944:1:exon
so has part: feature:340625-340726:1:exon
so has part: feature:340921-341115:1:exon
so has part: feature:341821-341968:1:exon
so has part: feature:342155-342241:1:exon
so has part: feature:342343-342450:1:exon
so has part: feature:342824-342960:1:exon
so has part: feature:343072-343182:1:exon
so has part: feature:343770-343828:1:exon
so has part: feature:344725-344818:1:exon
so has part: feature:345289-345389:1:exon
so has part: feature:345804-345909:1:exon
so has part: feature:346970-347093:1:exon
so has part: feature:347941-348002:1:exon
so has part: feature:348424-348538:1:exon
so has part: feature:348919-353692:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:306251-306484:1:exon

position:306484:1
position: 306484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:323884-323947:1:exon

position:323884:1
position: 323884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323947:1
position: 323947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:324254-324396:1:exon

position:324254:1
position: 324254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324396:1
position: 324396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:325309-325365:1:exon

position:325309:1
position: 325309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325365:1
position: 325365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:329112-329192:1:exon

position:329112:1
position: 329112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329192:1
position: 329192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:330449-330525:1:exon

position:330449:1
position: 330449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330525:1
position: 330525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:330773-330834:1:exon

position:330773:1
position: 330773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330834:1
position: 330834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:332196-332336:1:exon

position:332196:1
position: 332196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332336:1
position: 332336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:333228-333285:1:exon

position:333228:1
position: 333228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333285:1
position: 333285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:333687-333762:1:exon

position:333687:1
position: 333687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333762:1
position: 333762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:334786-334929:1:exon

position:334786:1
position: 334786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334929:1
position: 334929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:335276-335370:1:exon

position:335276:1
position: 335276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335370:1
position: 335370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:336179-336251:1:exon

position:336179:1
position: 336179
reference: sequence
type: ForwardStrandPosition
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position:336251:1
position: 336251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:337075-337258:1:exon

position:337075:1
position: 337075
reference: sequence
type: ForwardStrandPosition
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position:337258:1
position: 337258
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:339313-339401:1:exon

position:339313:1
position: 339313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339401:1
position: 339401
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:339828-339944:1:exon

position:339828:1
position: 339828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339944:1
position: 339944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:340625-340726:1:exon

position:340625:1
position: 340625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340726:1
position: 340726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:340921-341115:1:exon

position:340921:1
position: 340921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341115:1
position: 341115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:341821-341968:1:exon

position:341821:1
position: 341821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341968:1
position: 341968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:342155-342241:1:exon

position:342155:1
position: 342155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342241:1
position: 342241
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:342343-342450:1:exon

position:342343:1
position: 342343
reference: sequence
type: ForwardStrandPosition
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position:342450:1
position: 342450
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:342824-342960:1:exon

position:342824:1
position: 342824
reference: sequence
type: ForwardStrandPosition
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position:342960:1
position: 342960
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:343072-343182:1:exon

position:343072:1
position: 343072
reference: sequence
type: ForwardStrandPosition
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position:343182:1
position: 343182
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 24
SIO_000628: feature:343770-343828:1:exon

position:343770:1
position: 343770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343828:1
position: 343828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:344725-344818:1:exon

position:344725:1
position: 344725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344818:1
position: 344818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:345289-345389:1:exon

position:345289:1
position: 345289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345389:1
position: 345389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:345804-345909:1:exon

position:345804:1
position: 345804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345909:1
position: 345909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:346970-347093:1:exon

position:346970:1
position: 346970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347093:1
position: 347093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:347941-348002:1:exon

position:347941:1
position: 347941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348002:1
position: 348002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:348424-348538:1:exon

position:348424:1
position: 348424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348538:1
position: 348538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:348919-353692:1:exon

position:348919:1
position: 348919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: hip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: huntingtin-interacting protein 1 isoform X1
translation: MDRVKSSIQQVPNPIPKVLSRRAGASSLDAERESFERSQAVSINKAINTQEVAVKEKHARTCILGTHHEKGAHTFWAAINRLPLSSNAVLCWKFCHVFHKLLRDGHPNVLKDSMRNKADLSDMSRMWGHLSEGYGRLCSIYLKLLITKMEFHIKNPHFPGNLQMTDRQLDEAGENDVNNFFQMTVEMFDYLECELNLFLAVFSSLDMSRSVSVTAAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSCLPADTLQGHRDRFQEQFKKLKSLFYRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHISPVVVIPAEASSPESEPVVETEELVDTDALAQPSSENRFDDIFGTSSASDPFNFNSQNGAHKDEKDRLIAKLSREVRALKEELESFRLESARLCQALRGRVSELEAELAEQTHLKQQALGESEFLRAELEDLRRVKEDTEKEQRSLTEIERKAQANEQRYTKLKEKYTELVQSHADLLRKNAEVTKQMTVARAAQDEVESVRREMQEKVRAAREEAEHQEKEQAEQLQAFQTELCTSRAELERLRGTMASSQQSSAELSSRLAALEAEKAALAEGVAQKEAELAGLGEELERVQKSLASERESGVKASEALQNQLNEKETREQALESQLVGSRWAALQGALDEAHRIIQDSMARIEDPAHISCTSSADYLVSRSQAALDSVDRLQAARDKYLTDDTDVSELLRSVAQFAHLVGDTIVQGSATSHMVPLEQADSLAEAVKACGAEALALLCQLKEQGTLGSADSAQLRAGLARVQALAESLRPRGLELQQGELGDLVEQEMAATSIAVETAAARIEEMLNKSRAADSGVKMEVNERILASCTELMQAIKVLVLSSKDLQRDIVESGRGAASTKEFYAKNSRWTEGLISASKAVGWGATVMVDAADLVVQGQGKFEELMVCSHEIAASTAQLVAASKVKADKDSTNLGRLQQASRRVTQATAGLVASTKSGKSQIEETDTMDFSSMTLTQIKRQEMDSQVRVLELEMHLQKERERLGELRKKHYMLAGVAEGWGEEEGTG
SIO_010081: hip1
subclass of: SO_0000673
so part of: hip1
location: join(306368..306484,323884..323947,324254..324396,325309..325365,329112..329192,330449..330525,330773..330834,332196..332336,333228..333285,333687..333762,334786..334929,335276..335370,336179..336251,337075..337258,339313..339401,339828..339944,340625..340726,340921..341115,341821..341968,342155..342241,342343..342450,342824..342960,343072..343182,343770..343828,344725..344818,345289..345389,345804..345909,346970..347093,347941..348002,348424..348538,348919..348929)
location: region:306368-348929:1
so has part: feature:306368-306484:1:exon
so has part: feature:323884-323947:1:exon
so has part: feature:324254-324396:1:exon
so has part: feature:325309-325365:1:exon
so has part: feature:329112-329192:1:exon
so has part: feature:330449-330525:1:exon
so has part: feature:330773-330834:1:exon
so has part: feature:332196-332336:1:exon
so has part: feature:333228-333285:1:exon
so has part: feature:333687-333762:1:exon
so has part: feature:334786-334929:1:exon
so has part: feature:335276-335370:1:exon
so has part: feature:336179-336251:1:exon
so has part: feature:337075-337258:1:exon
so has part: feature:339313-339401:1:exon
so has part: feature:339828-339944:1:exon
so has part: feature:340625-340726:1:exon
so has part: feature:340921-341115:1:exon
so has part: feature:341821-341968:1:exon
so has part: feature:342155-342241:1:exon
so has part: feature:342343-342450:1:exon
so has part: feature:342824-342960:1:exon
so has part: feature:343072-343182:1:exon
so has part: feature:343770-343828:1:exon
so has part: feature:344725-344818:1:exon
so has part: feature:345289-345389:1:exon
so has part: feature:345804-345909:1:exon
so has part: feature:346970-347093:1:exon
so has part: feature:347941-348002:1:exon
so has part: feature:348424-348538:1:exon
so has part: feature:348919-348929:1:exon

XP_015223174.1
type: Protein
SIO_000068: ncbiprotein

position:306368:1
position: 306368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348929:1
position: 348929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306368-306484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323884-323947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324254-324396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325309-325365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:329112-329192:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330449-330525:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:330773-330834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:332196-332336:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333228-333285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333687-333762:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:334786-334929:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:335276-335370:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:336179-336251:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:337075-337258:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:339313-339401:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:339828-339944:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:340625-340726:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:340921-341115:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:341821-341968:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:342155-342241:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:342343-342450:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:342824-342960:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:343072-343182:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:343770-343828:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:344725-344818:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:345289-345389:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:345804-345909:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:346970-347093:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:347941-348002:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:348424-348538:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:348919-348929:1:exon

hip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: hip1
product: huntingtin interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_015367689.1
SIO_010081: hip1
subclass of: SO_0000673
so part of: hip1
location: join(316102..316576,323884..323947,324254..324396,325309..325365,329112..329192,330449..330525,330773..330834,332196..332336,333228..333285,333687..333762,334786..334929,335276..335370,336179..336251,337075..337258,339313..339401,339828..339944,340625..340726,340921..341115,341821..341968,342155..342241,342343..342450,342824..342960,343072..343182,343770..343828,344725..344818,345289..345389,345804..345909,346970..347093,347941..348002,348424..348538,348919..353692)
location: region:316102-353692:1
so has part: feature:316102-316576:1:exon
so has part: feature:323884-323947:1:exon
so has part: feature:324254-324396:1:exon
so has part: feature:325309-325365:1:exon
so has part: feature:329112-329192:1:exon
so has part: feature:330449-330525:1:exon
so has part: feature:330773-330834:1:exon
so has part: feature:332196-332336:1:exon
so has part: feature:333228-333285:1:exon
so has part: feature:333687-333762:1:exon
so has part: feature:334786-334929:1:exon
so has part: feature:335276-335370:1:exon
so has part: feature:336179-336251:1:exon
so has part: feature:337075-337258:1:exon
so has part: feature:339313-339401:1:exon
so has part: feature:339828-339944:1:exon
so has part: feature:340625-340726:1:exon
so has part: feature:340921-341115:1:exon
so has part: feature:341821-341968:1:exon
so has part: feature:342155-342241:1:exon
so has part: feature:342343-342450:1:exon
so has part: feature:342824-342960:1:exon
so has part: feature:343072-343182:1:exon
so has part: feature:343770-343828:1:exon
so has part: feature:344725-344818:1:exon
so has part: feature:345289-345389:1:exon
so has part: feature:345804-345909:1:exon
so has part: feature:346970-347093:1:exon
so has part: feature:347941-348002:1:exon
so has part: feature:348424-348538:1:exon
so has part: feature:348919-353692:1:exon

position:316102:1
position: 316102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316102-316576:1:exon

position:316576:1
position: 316576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:323884-323947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324254-324396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325309-325365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:329112-329192:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330449-330525:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:330773-330834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:332196-332336:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333228-333285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333687-333762:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:334786-334929:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:335276-335370:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:336179-336251:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:337075-337258:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:339313-339401:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:339828-339944:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:340625-340726:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:340921-341115:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:341821-341968:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:342155-342241:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:342343-342450:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:342824-342960:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:343072-343182:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:343770-343828:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:344725-344818:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:345289-345389:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:345804-345909:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:346970-347093:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:347941-348002:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:348424-348538:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:348919-353692:1:exon

hip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: hip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: huntingtin-interacting protein 1 isoform X2
translation: MDLSKMAVSINKAINTQEVAVKEKHARTCILGTHHEKGAHTFWAAINRLPLSSNAVLCWKFCHVFHKLLRDGHPNVLKDSMRNKADLSDMSRMWGHLSEGYGRLCSIYLKLLITKMEFHIKNPHFPGNLQMTDRQLDEAGENDVNNFFQMTVEMFDYLECELNLFLAVFSSLDMSRSVSVTAAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSCLPADTLQGHRDRFQEQFKKLKSLFYRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHISPVVVIPAEASSPESEPVVETEELVDTDALAQPSSENRFDDIFGTSSASDPFNFNSQNGAHKDEKDRLIAKLSREVRALKEELESFRLESARLCQALRGRVSELEAELAEQTHLKQQALGESEFLRAELEDLRRVKEDTEKEQRSLTEIERKAQANEQRYTKLKEKYTELVQSHADLLRKNAEVTKQMTVARAAQDEVESVRREMQEKVRAAREEAEHQEKEQAEQLQAFQTELCTSRAELERLRGTMASSQQSSAELSSRLAALEAEKAALAEGVAQKEAELAGLGEELERVQKSLASERESGVKASEALQNQLNEKETREQALESQLVGSRWAALQGALDEAHRIIQDSMARIEDPAHISCTSSADYLVSRSQAALDSVDRLQAARDKYLTDDTDVSELLRSVAQFAHLVGDTIVQGSATSHMVPLEQADSLAEAVKACGAEALALLCQLKEQGTLGSADSAQLRAGLARVQALAESLRPRGLELQQGELGDLVEQEMAATSIAVETAAARIEEMLNKSRAADSGVKMEVNERILASCTELMQAIKVLVLSSKDLQRDIVESGRGAASTKEFYAKNSRWTEGLISASKAVGWGATVMVDAADLVVQGQGKFEELMVCSHEIAASTAQLVAASKVKADKDSTNLGRLQQASRRVTQATAGLVASTKSGKSQIEETDTMDFSSMTLTQIKRQEMDSQVRVLELEMHLQKERERLGELRKKHYMLAGVAEGWGEEEGTG
SIO_010081: hip1
subclass of: SO_0000673
so part of: hip1
location: join(316559..316576,323884..323947,324254..324396,325309..325365,329112..329192,330449..330525,330773..330834,332196..332336,333228..333285,333687..333762,334786..334929,335276..335370,336179..336251,337075..337258,339313..339401,339828..339944,340625..340726,340921..341115,341821..341968,342155..342241,342343..342450,342824..342960,343072..343182,343770..343828,344725..344818,345289..345389,345804..345909,346970..347093,347941..348002,348424..348538,348919..348929)
location: region:316559-348929:1
so has part: feature:316559-316576:1:exon
so has part: feature:323884-323947:1:exon
so has part: feature:324254-324396:1:exon
so has part: feature:325309-325365:1:exon
so has part: feature:329112-329192:1:exon
so has part: feature:330449-330525:1:exon
so has part: feature:330773-330834:1:exon
so has part: feature:332196-332336:1:exon
so has part: feature:333228-333285:1:exon
so has part: feature:333687-333762:1:exon
so has part: feature:334786-334929:1:exon
so has part: feature:335276-335370:1:exon
so has part: feature:336179-336251:1:exon
so has part: feature:337075-337258:1:exon
so has part: feature:339313-339401:1:exon
so has part: feature:339828-339944:1:exon
so has part: feature:340625-340726:1:exon
so has part: feature:340921-341115:1:exon
so has part: feature:341821-341968:1:exon
so has part: feature:342155-342241:1:exon
so has part: feature:342343-342450:1:exon
so has part: feature:342824-342960:1:exon
so has part: feature:343072-343182:1:exon
so has part: feature:343770-343828:1:exon
so has part: feature:344725-344818:1:exon
so has part: feature:345289-345389:1:exon
so has part: feature:345804-345909:1:exon
so has part: feature:346970-347093:1:exon
so has part: feature:347941-348002:1:exon
so has part: feature:348424-348538:1:exon
so has part: feature:348919-348929:1:exon

XP_015223175.1
type: Protein
SIO_000068: ncbiprotein

position:316559:1
position: 316559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316559-316576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323884-323947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324254-324396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325309-325365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:329112-329192:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330449-330525:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:330773-330834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:332196-332336:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333228-333285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333687-333762:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:334786-334929:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:335276-335370:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:336179-336251:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:337075-337258:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:339313-339401:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:339828-339944:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:340625-340726:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:340921-341115:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:341821-341968:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:342155-342241:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:342343-342450:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:342824-342960:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:343072-343182:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:343770-343828:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:344725-344818:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:345289-345389:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:345804-345909:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:346970-347093:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:347941-348002:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:348424-348538:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:348919-348929:1:exon

ypel2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ypel2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(358032..370360)
location: region:358032-370360:-1
so has part: feature:358032-370360:-1:exon
subclass of: SO_0000010

102686445
type: Gene
SIO_000068: ncbigene

position:358032:-1
position: 358032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370360:-1
position: 370360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358032-370360:-1:exon

ypel2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ypel2
product: yippee like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015367831.1
SIO_010081: ypel2
subclass of: SO_0000673
so part of: ypel2
location: complement(join(358032..360229,361178..361286,361577..361620,362349..362423,368042..368272,368774..370360))
location: region:358032-370360:-1
so has part: feature:368774-370360:-1:exon
so has part: feature:368042-368272:-1:exon
so has part: feature:362349-362423:-1:exon
so has part: feature:361577-361620:-1:exon
so has part: feature:361178-361286:-1:exon
so has part: feature:358032-360229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368774-370360:-1:exon

position:368774:-1
position: 368774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:368042-368272:-1:exon

position:368042:-1
position: 368042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368272:-1
position: 368272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:362349-362423:-1:exon

position:362349:-1
position: 362349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362423:-1
position: 362423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:361577-361620:-1:exon

position:361577:-1
position: 361577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361620:-1
position: 361620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:361178-361286:-1:exon

position:361178:-1
position: 361178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361286:-1
position: 361286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:358032-360229:-1:exon

position:360229:-1
position: 360229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ypel2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ypel2
product: yippee like 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_006640800.2
SIO_010081: ypel2
subclass of: SO_0000673
so part of: ypel2
location: complement(join(358032..360229,361178..361286,361577..361620,368042..368272,368812..368970))
location: region:358032-368970:-1
so has part: feature:368812-368970:-1:exon
so has part: feature:368042-368272:-1:exon
so has part: feature:361577-361620:-1:exon
so has part: feature:361178-361286:-1:exon
so has part: feature:358032-360229:-1:exon

position:368970:-1
position: 368970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368812-368970:-1:exon

position:368812:-1
position: 368812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:368042-368272:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361577-361620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:361178-361286:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358032-360229:-1:exon

ypel2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ypel2
product: yippee like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015367832.1
SIO_010081: ypel2
subclass of: SO_0000673
so part of: ypel2
location: complement(join(358032..360229,361178..361286,361577..361620,362349..362423,368042..368272,368812..368970))
location: region:358032-368970:-1
so has part: feature:368812-368970:-1:exon
so has part: feature:368042-368272:-1:exon
so has part: feature:362349-362423:-1:exon
so has part: feature:361577-361620:-1:exon
so has part: feature:361178-361286:-1:exon
so has part: feature:358032-360229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368812-368970:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:368042-368272:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:362349-362423:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:361577-361620:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:361178-361286:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:358032-360229:-1:exon

ypel2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ypel2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein yippee-like 2 isoform X2
translation: MVRMTRSKTFQAYLPSCHRTYSCVHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKFIIELAHMIKDNGWD
SIO_010081: ypel2
subclass of: SO_0000673
so part of: ypel2
location: complement(join(360140..360229,361178..361286,361577..361620,368042..368158))
location: region:360140-368158:-1
so has part: feature:368042-368158:-1:exon
so has part: feature:361577-361620:-1:exon
so has part: feature:361178-361286:-1:exon
so has part: feature:360140-360229:-1:exon

XP_006640863.1
type: Protein
SIO_000068: ncbiprotein

position:360140:-1
position: 360140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368158:-1
position: 368158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368042-368158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361577-361620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361178-361286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360140-360229:-1:exon

ypel2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ypel2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein yippee-like 2 isoform X1
translation: MVRMTRSKTFQAYLPSCHRTYSCVHCRAHLANHDELISKQVQLYRPWKMFADVRGDMGPRSQRQSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKFIIELAHMIKDNGWD
SIO_010081: ypel2
subclass of: SO_0000673
so part of: ypel2
location: complement(join(360140..360229,361178..361286,361577..361620,362349..362423,368042..368158))
location: region:360140-368158:-1
so has part: feature:368042-368158:-1:exon
so has part: feature:362349-362423:-1:exon
so has part: feature:361577-361620:-1:exon
so has part: feature:361178-361286:-1:exon
so has part: feature:360140-360229:-1:exon

XP_015223317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368042-368158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:362349-362423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361577-361620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:361178-361286:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:360140-360229:-1:exon

ypel2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ypel2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein yippee-like 2 isoform X1
translation: MVRMTRSKTFQAYLPSCHRTYSCVHCRAHLANHDELISKQVQLYRPWKMFADVRGDMGPRSQRQSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKFIIELAHMIKDNGWD
SIO_010081: ypel2
subclass of: SO_0000673
so part of: ypel2
location: complement(join(360140..360229,361178..361286,361577..361620,362349..362423,368042..368158))
location: region:360140-368158:-1
so has part: feature:368042-368158:-1:exon
so has part: feature:362349-362423:-1:exon
so has part: feature:361577-361620:-1:exon
so has part: feature:361178-361286:-1:exon
so has part: feature:360140-360229:-1:exon

XP_015223318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368042-368158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:362349-362423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361577-361620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:361178-361286:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:360140-360229:-1:exon

gdpd1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: gdpd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(375018..391632)
location: region:375018-391632:-1
so has part: feature:375018-391632:-1:exon
subclass of: SO_0000010

102695619
type: Gene
SIO_000068: ncbigene

position:375018:-1
position: 375018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391632:-1
position: 391632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375018-391632:-1:exon

gdpd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: gdpd1
product: glycerophosphodiester phosphodiesterase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015367587.1
SIO_010081: gdpd1
subclass of: SO_0000673
so part of: gdpd1
location: complement(join(375018..378402,378496..378547,379246..379305,382351..382484,384154..384243,384332..384453,384942..384987,385715..385850,386320..386362,390010..391632))
location: region:375018-391632:-1
so has part: feature:390010-391632:-1:exon
so has part: feature:386320-386362:-1:exon
so has part: feature:385715-385850:-1:exon
so has part: feature:384942-384987:-1:exon
so has part: feature:384332-384453:-1:exon
so has part: feature:384154-384243:-1:exon
so has part: feature:382351-382484:-1:exon
so has part: feature:379246-379305:-1:exon
so has part: feature:378496-378547:-1:exon
so has part: feature:375018-378402:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:390010-391632:-1:exon

position:390010:-1
position: 390010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:386320-386362:-1:exon

position:386320:-1
position: 386320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386362:-1
position: 386362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:385715-385850:-1:exon

position:385715:-1
position: 385715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385850:-1
position: 385850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:384942-384987:-1:exon

position:384942:-1
position: 384942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384987:-1
position: 384987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:384332-384453:-1:exon

position:384332:-1
position: 384332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384453:-1
position: 384453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:384154-384243:-1:exon

position:384154:-1
position: 384154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384243:-1
position: 384243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:382351-382484:-1:exon

position:382351:-1
position: 382351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382484:-1
position: 382484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:379246-379305:-1:exon

position:379246:-1
position: 379246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379305:-1
position: 379305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:378496-378547:-1:exon

position:378496:-1
position: 378496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378547:-1
position: 378547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:375018-378402:-1:exon

position:378402:-1
position: 378402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gdpd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: gdpd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerophosphodiester phosphodiesterase domain-containing protein 1
translation: MCAAIYVLSTLGGYLLTSALLLKCPSLLHRRKRETFRSRHISHRGGAGENLENTMAAFRHAVKLGTDMLELDCHLTKDEQVVVSHDSNLKRSTGVSALIRDLSYAELPPYLCKLQVTFQREGCCEGGKDKRIPLLRDVFEAFPSTPVNIDIKANNDTLIRKVSELVTEFNREHLTVWGNASNEVVQKCYRENPRIPILFSLQRVLLLVGLFYTGLLPFVPLREQFLEIPMPSIITKLKDPQTMTRSQRFIAWLADALLMRKALFQHLTARGIQVYVWVLNDEEDFKRAFDLGATGVMTDYPTKLKEFMERNSPS
SIO_010081: gdpd1
subclass of: SO_0000673
so part of: gdpd1
location: complement(join(378277..378402,378496..378547,379246..379305,382351..382484,384154..384243,384332..384453,384942..384987,385715..385850,386320..386362,390010..390145))
location: region:378277-390145:-1
so has part: feature:390010-390145:-1:exon
so has part: feature:386320-386362:-1:exon
so has part: feature:385715-385850:-1:exon
so has part: feature:384942-384987:-1:exon
so has part: feature:384332-384453:-1:exon
so has part: feature:384154-384243:-1:exon
so has part: feature:382351-382484:-1:exon
so has part: feature:379246-379305:-1:exon
so has part: feature:378496-378547:-1:exon
so has part: feature:378277-378402:-1:exon

XP_015223073.1
type: Protein
SIO_000068: ncbiprotein

position:378277:-1
position: 378277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390145:-1
position: 390145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390010-390145:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:386320-386362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:385715-385850:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384942-384987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384332-384453:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:384154-384243:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:382351-382484:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:379246-379305:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:378496-378547:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:378277-378402:-1:exon

smg8
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: smg8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(393090..399008)
location: region:393090-399008:-1
so has part: feature:393090-399008:-1:exon
subclass of: SO_0000010

102686647
type: Gene
SIO_000068: ncbigene

position:393090:-1
position: 393090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399008:-1
position: 399008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393090-399008:-1:exon

smg8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: smg8
product: SMG8 nonsense mediated mRNA decay factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006640801.2
SIO_010081: smg8
subclass of: SO_0000673
so part of: smg8
location: complement(join(393090..393921,394985..395869,396881..397026,397375..399008))
location: region:393090-399008:-1
so has part: feature:397375-399008:-1:exon
so has part: feature:396881-397026:-1:exon
so has part: feature:394985-395869:-1:exon
so has part: feature:393090-393921:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397375-399008:-1:exon

position:397375:-1
position: 397375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:396881-397026:-1:exon

position:396881:-1
position: 396881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397026:-1
position: 397026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:394985-395869:-1:exon

position:394985:-1
position: 394985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395869:-1
position: 395869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:393090-393921:-1:exon

position:393921:-1
position: 393921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

smg8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: smg8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SMG8
translation: MAAPVSMGELLRSEQLEDPLYKDEGLCVLGIFGKSALQPSSGKESLINTLADKHVFPLFGPEGDADIPGGGSLIRAYYNQESRVLYLVLTTVCDNRQLLRACEALGSGLGHAEAHDFWKAAEKQRCLHLLYLFSLCHILLLVHPTCSFDVTYDRLFRALDALRQKALPLLRAAIKDCPVSKEWKLNCRPCPPRLLFVFQMNGALKVSGGAGAGAAAGGDAPGGNPEKPKKHSPRRRLQHTLEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYVVPGPEEDPVGALLGQLRGHCTLRDSEPGAVLTGPRRYTQLRQSARQPSFTVEGSSLAGAGGQLVDCTLKEFLWQHVELVLAKKGFDDSVGRNPQPSHFELPTYSKWAQVAGRLHQVMLDSQDEGSAELALKVQGQLKVLEGFLDSDAKFSESRCQKALPLAHSAYQSNLPHNYTTTVHKNQLAQALRVYSQHARGVAFQRYALQLHDDCYKFWSNGHQLCEERSLTDQHCVHKFHLLPKTGEKPEMDRNPPILYHNSRGRSTSSCNCGRKQVPREDPFDIKAANYDFYQMLEEKCCGKLERIHFPVFQPSTPDPDPEPEGEEAAGPPEAPAEGSGDGEQLKEEEATGHTPGDSTSLSLALSLGQSADSLGPYGDGAEGQEKRPSLAERQPSTVEYLLGMLHSGCPEGLLPRFSSWSLVKLGPAKAYSCHSGLDQPGFLPGSTFLLPWDIVIRCRPEEEMGLAEPLDAAPSSWPAPNKALAGKRAPTAGLGRGRRGRDDVARAFVGFEYEDGRGRRFISSGPDKVVKVLGPGGPKESATRALNSDMPLYFHSPTQGRGLKPHYAQLARLFIVVPDAPLEIVLAPQVQPGPPPCPIFHPEQREVLLPPDGFWVLRFPYAYATERGPCYPPKDSQQLPSFRVLRGALRANTTSPPPQ
SIO_010081: smg8
subclass of: SO_0000673
so part of: smg8
location: complement(join(393709..393921,394985..395869,396881..397026,397375..398920))
location: region:393709-398920:-1
so has part: feature:397375-398920:-1:exon
so has part: feature:396881-397026:-1:exon
so has part: feature:394985-395869:-1:exon
so has part: feature:393709-393921:-1:exon

XP_006640864.1
type: Protein
SIO_000068: ncbiprotein

position:393709:-1
position: 393709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398920:-1
position: 398920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397375-398920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:396881-397026:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394985-395869:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:393709-393921:-1:exon

LOC107079941
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 399007..403580
location: region:399007-403580:1
so has part: feature:399007-403580:1:exon
subclass of: SO_0000011

107079941
type: Gene
SIO_000068: ncbigene

position:399007:1
position: 399007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403580:1
position: 403580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399007-403580:1:exon

LOC107079941
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107079941
product: uncharacterized LOC107079941, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_001480834.1
SIO_010081: LOC107079941
subclass of: SO_0000673
so part of: LOC107079941
location: join(399007..399085,400108..400303,402961..403580)
location: region:399007-403580:1
so has part: feature:399007-399085:1:exon
so has part: feature:400108-400303:1:exon
so has part: feature:402961-403580:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:399007-399085:1:exon

position:399085:1
position: 399085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:400108-400303:1:exon

position:400108:1
position: 400108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400303:1
position: 400303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:402961-403580:1:exon

position:402961:1
position: 402961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107079941
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107079941
product: uncharacterized LOC107079941, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_001480833.1
SIO_010081: LOC107079941
subclass of: SO_0000673
so part of: LOC107079941
location: join(399007..399085,400108..400565)
location: region:399007-400565:1
so has part: feature:399007-399085:1:exon
so has part: feature:400108-400565:1:exon

position:400565:1
position: 400565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399007-399085:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:400108-400565:1:exon

prr11
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: prr11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(401074..408022)
location: region:401074-408022:-1
so has part: feature:401074-408022:-1:exon
subclass of: SO_0000010

102695816
type: Gene
SIO_000068: ncbigene

position:401074:-1
position: 401074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408022:-1
position: 408022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401074-408022:-1:exon

prr11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: prr11
product: proline rich 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015367584.1
SIO_010081: prr11
subclass of: SO_0000673
so part of: prr11
location: complement(join(401074..402421,402674..402770,402995..403054,403663..403778,404240..404341,404814..404993,405795..405917,406987..407107,407197..407318,407651..408022))
location: region:401074-408022:-1
so has part: feature:407651-408022:-1:exon
so has part: feature:407197-407318:-1:exon
so has part: feature:406987-407107:-1:exon
so has part: feature:405795-405917:-1:exon
so has part: feature:404814-404993:-1:exon
so has part: feature:404240-404341:-1:exon
so has part: feature:403663-403778:-1:exon
so has part: feature:402995-403054:-1:exon
so has part: feature:402674-402770:-1:exon
so has part: feature:401074-402421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:407651-408022:-1:exon

position:407651:-1
position: 407651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:407197-407318:-1:exon

position:407197:-1
position: 407197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407318:-1
position: 407318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:406987-407107:-1:exon

position:406987:-1
position: 406987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407107:-1
position: 407107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:405795-405917:-1:exon

position:405795:-1
position: 405795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405917:-1
position: 405917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:404814-404993:-1:exon

position:404814:-1
position: 404814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404993:-1
position: 404993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:404240-404341:-1:exon

position:404240:-1
position: 404240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404341:-1
position: 404341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:403663-403778:-1:exon

position:403663:-1
position: 403663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403778:-1
position: 403778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:402995-403054:-1:exon

position:402995:-1
position: 402995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403054:-1
position: 403054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:402674-402770:-1:exon

position:402674:-1
position: 402674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402770:-1
position: 402770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:401074-402421:-1:exon

position:402421:-1
position: 402421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

prr11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: prr11
product: proline rich 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015367585.1
SIO_010081: prr11
subclass of: SO_0000673
so part of: prr11
location: complement(join(401074..402421,402674..402770,402995..403054,403663..403778,404240..404338,404814..404996,405795..405917,406987..407107,407197..407318,407651..408022))
location: region:401074-408022:-1
so has part: feature:407651-408022:-1:exon
so has part: feature:407197-407318:-1:exon
so has part: feature:406987-407107:-1:exon
so has part: feature:405795-405917:-1:exon
so has part: feature:404814-404996:-1:exon
so has part: feature:404240-404338:-1:exon
so has part: feature:403663-403778:-1:exon
so has part: feature:402995-403054:-1:exon
so has part: feature:402674-402770:-1:exon
so has part: feature:401074-402421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:407651-408022:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:407197-407318:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406987-407107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405795-405917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404814-404996:-1:exon

position:404996:-1
position: 404996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:404240-404338:-1:exon

position:404338:-1
position: 404338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:403663-403778:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:402995-403054:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:402674-402770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:401074-402421:-1:exon

prr11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: prr11
product: proline rich 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015367583.1
SIO_010081: prr11
subclass of: SO_0000673
so part of: prr11
location: complement(join(401074..402421,402674..402770,402995..403054,403663..403778,404240..404341,404814..404996,405795..405917,406987..407107,407197..407318,407651..408022))
location: region:401074-408022:-1
so has part: feature:407651-408022:-1:exon
so has part: feature:407197-407318:-1:exon
so has part: feature:406987-407107:-1:exon
so has part: feature:405795-405917:-1:exon
so has part: feature:404814-404996:-1:exon
so has part: feature:404240-404341:-1:exon
so has part: feature:403663-403778:-1:exon
so has part: feature:402995-403054:-1:exon
so has part: feature:402674-402770:-1:exon
so has part: feature:401074-402421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:407651-408022:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:407197-407318:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406987-407107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405795-405917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404814-404996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404240-404341:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:403663-403778:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:402995-403054:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:402674-402770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:401074-402421:-1:exon

prr11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: prr11
product: proline rich 11, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015367586.1
SIO_010081: prr11
subclass of: SO_0000673
so part of: prr11
location: complement(join(401074..402421,402674..402770,402995..403054,403663..403778,404240..404341,404814..405253))
location: region:401074-405253:-1
so has part: feature:404814-405253:-1:exon
so has part: feature:404240-404341:-1:exon
so has part: feature:403663-403778:-1:exon
so has part: feature:402995-403054:-1:exon
so has part: feature:402674-402770:-1:exon
so has part: feature:401074-402421:-1:exon

position:405253:-1
position: 405253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404814-405253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:404240-404341:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:403663-403778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:402995-403054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:402674-402770:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:401074-402421:-1:exon

prr11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: prr11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 11 isoform X2
translation: MARTLTRSAQRRRKRRFCRQSWALKHPKQQEPPPPPPAAPSGPRPAEPRTSECPVRRLGLGRGLGAVLLAVGAVCHRWRSRLAQACALLQDTLFPWRRYARELHALRLQVEGLREEMSHWGSTPQAGEKADVCSCQRPACCPPALLPPALPAPPPPPPPPPLPPAAPPQKPLHILRKDVPPKPPQQLPVVKQEVPAAVTLRDLRAVKLRKVSLPVDAKKVVSPGRQRVPLVTVADLQKVSLRRSHSDQPLKLRISLTRSPTKSPLNLRRQLKKVDIERSPGGTPLYDKENRETGTGLTPIMTQALRRKFQIAHPRSPSPKFRAPLNKSFDDQS
SIO_010081: prr11
subclass of: SO_0000673
so part of: prr11
location: complement(join(402350..402421,402674..402770,402995..403054,403663..403778,404240..404341,404814..404993,405795..405917,406987..407107,407197..407318,407651..407659))
location: region:402350-407659:-1
so has part: feature:407651-407659:-1:exon
so has part: feature:407197-407318:-1:exon
so has part: feature:406987-407107:-1:exon
so has part: feature:405795-405917:-1:exon
so has part: feature:404814-404993:-1:exon
so has part: feature:404240-404341:-1:exon
so has part: feature:403663-403778:-1:exon
so has part: feature:402995-403054:-1:exon
so has part: feature:402674-402770:-1:exon
so has part: feature:402350-402421:-1:exon

XP_015223070.1
type: Protein
SIO_000068: ncbiprotein

position:402350:-1
position: 402350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407659:-1
position: 407659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407651-407659:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:407197-407318:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406987-407107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405795-405917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404814-404993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404240-404341:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:403663-403778:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:402995-403054:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:402674-402770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:402350-402421:-1:exon

prr11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: prr11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 11 isoform X3
translation: MARTLTRSAQRRRKRRFCRQSWALKHPKQQEPPPPPPAAPSGPRPAEPRTSECPVRRLGLGRGLGAVLLAVGAVCHRWRSRLAQACALLQDTLFPWRRYARELHALRLQVEGLREEMSHWGSTPQQAGEKADVCSCQRPACCPPALLPPALPAPPPPPPPPPLPPAAPPQKPLHILRKDVPPKPPQLPVVKQEVPAAVTLRDLRAVKLRKVSLPVDAKKVVSPGRQRVPLVTVADLQKVSLRRSHSDQPLKLRISLTRSPTKSPLNLRRQLKKVDIERSPGGTPLYDKENRETGTGLTPIMTQALRRKFQIAHPRSPSPKFRAPLNKSFDDQS
SIO_010081: prr11
subclass of: SO_0000673
so part of: prr11
location: complement(join(402350..402421,402674..402770,402995..403054,403663..403778,404240..404338,404814..404996,405795..405917,406987..407107,407197..407318,407651..407659))
location: region:402350-407659:-1
so has part: feature:407651-407659:-1:exon
so has part: feature:407197-407318:-1:exon
so has part: feature:406987-407107:-1:exon
so has part: feature:405795-405917:-1:exon
so has part: feature:404814-404996:-1:exon
so has part: feature:404240-404338:-1:exon
so has part: feature:403663-403778:-1:exon
so has part: feature:402995-403054:-1:exon
so has part: feature:402674-402770:-1:exon
so has part: feature:402350-402421:-1:exon

XP_015223071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407651-407659:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:407197-407318:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406987-407107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405795-405917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404814-404996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404240-404338:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:403663-403778:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:402995-403054:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:402674-402770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:402350-402421:-1:exon

prr11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: prr11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 11 isoform X1
translation: MARTLTRSAQRRRKRRFCRQSWALKHPKQQEPPPPPPAAPSGPRPAEPRTSECPVRRLGLGRGLGAVLLAVGAVCHRWRSRLAQACALLQDTLFPWRRYARELHALRLQVEGLREEMSHWGSTPQQAGEKADVCSCQRPACCPPALLPPALPAPPPPPPPPPLPPAAPPQKPLHILRKDVPPKPPQQLPVVKQEVPAAVTLRDLRAVKLRKVSLPVDAKKVVSPGRQRVPLVTVADLQKVSLRRSHSDQPLKLRISLTRSPTKSPLNLRRQLKKVDIERSPGGTPLYDKENRETGTGLTPIMTQALRRKFQIAHPRSPSPKFRAPLNKSFDDQS
SIO_010081: prr11
subclass of: SO_0000673
so part of: prr11
location: complement(join(402350..402421,402674..402770,402995..403054,403663..403778,404240..404341,404814..404996,405795..405917,406987..407107,407197..407318,407651..407659))
location: region:402350-407659:-1
so has part: feature:407651-407659:-1:exon
so has part: feature:407197-407318:-1:exon
so has part: feature:406987-407107:-1:exon
so has part: feature:405795-405917:-1:exon
so has part: feature:404814-404996:-1:exon
so has part: feature:404240-404341:-1:exon
so has part: feature:403663-403778:-1:exon
so has part: feature:402995-403054:-1:exon
so has part: feature:402674-402770:-1:exon
so has part: feature:402350-402421:-1:exon

XP_015223069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407651-407659:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:407197-407318:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406987-407107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405795-405917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404814-404996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404240-404341:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:403663-403778:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:402995-403054:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:402674-402770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:402350-402421:-1:exon

prr11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: prr11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 11 isoform X4
translation: MGEYFHKMLYTQGSQVSIFKCFTVFINIPGRSIDVTSGFPSLRSHWEACPVLLVSLQGLILLSVLQQAGEKADVCSCQRPACCPPALLPPALPAPPPPPPPPPLPPAAPPQKPLHILRKDVPPKPPQQLPVVKQEVPAAVTLRDLRAVKLRKVSLPVDAKKVVSPGRQRVPLVTVADLQKVSLRRSHSDQPLKLRISLTRSPTKSPLNLRRQLKKVDIERSPGGTPLYDKENRETGTGLTPIMTQALRRKFQIAHPRSPSPKFRAPLNKSFDDQS
SIO_010081: prr11
subclass of: SO_0000673
so part of: prr11
location: complement(join(402350..402421,402674..402770,402995..403054,403663..403778,404240..404341,404814..405194))
location: region:402350-405194:-1
so has part: feature:404814-405194:-1:exon
so has part: feature:404240-404341:-1:exon
so has part: feature:403663-403778:-1:exon
so has part: feature:402995-403054:-1:exon
so has part: feature:402674-402770:-1:exon
so has part: feature:402350-402421:-1:exon

XP_015223072.1
type: Protein
SIO_000068: ncbiprotein

position:405194:-1
position: 405194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404814-405194:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:404240-404341:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:403663-403778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:402995-403054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:402674-402770:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:402350-402421:-1:exon

ska2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ska2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 408214..413682
location: region:408214-413682:1
so has part: feature:408214-413682:1:exon
subclass of: SO_0000010

102696017
type: Gene
SIO_000068: ncbigene

position:408214:1
position: 408214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413682:1
position: 413682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408214-413682:1:exon

ska2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ska2
product: spindle and kinetochore associated complex subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015367589.1
SIO_010081: ska2
subclass of: SO_0000673
so part of: ska2
location: join(408214..408337,412196..412285,412770..413009,413441..413682)
location: region:408214-413682:1
so has part: feature:408214-408337:1:exon
so has part: feature:412196-412285:1:exon
so has part: feature:412770-413009:1:exon
so has part: feature:413441-413682:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408214-408337:1:exon

position:408337:1
position: 408337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:412196-412285:1:exon

position:412196:1
position: 412196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412285:1
position: 412285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:412770-413009:1:exon

position:412770:1
position: 412770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413009:1
position: 413009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:413441-413682:1:exon

position:413441:1
position: 413441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ska2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ska2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spindle and kinetochore-associated protein 2
translation: METPVNKLEAMFQKAESDLGYLEKQLKFEFMTKMAESGAAEDNPVKLLEKLSAVKARHKALCGQMEEIAKQQQQSMEAIRAHLSTTVQLVEQLQKSADVEVQPLREAEQAAAQALLGDAVEIPAASGAAATV
SIO_010081: ska2
subclass of: SO_0000673
so part of: ska2
location: join(408305..408337,412196..412285,412770..413009,413441..413476)
location: region:408305-413476:1
so has part: feature:408305-408337:1:exon
so has part: feature:412196-412285:1:exon
so has part: feature:412770-413009:1:exon
so has part: feature:413441-413476:1:exon

XP_015223075.1
type: Protein
SIO_000068: ncbiprotein

position:408305:1
position: 408305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413476:1
position: 413476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408305-408337:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412196-412285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412770-413009:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413441-413476:1:exon

tex14
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: tex14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(414343..435435)
location: region:414343-435435:-1
so has part: feature:414343-435435:-1:exon
subclass of: SO_0000010

107079958
type: Gene
SIO_000068: ncbigene

position:414343:-1
position: 414343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435435:-1
position: 435435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414343-435435:-1:exon

tex14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: tex14
product: testis expressed 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015367823.1
SIO_010081: tex14
subclass of: SO_0000673
so part of: tex14
location: complement(join(414343..415070,415924..415990,416167..416270,416551..416655,417244..417358,418027..418161,418270..418654,419009..419166,419416..419543,420094..420172,420747..420864,421163..421273,421683..421780,422173..422403,422657..422754,423630..423727,424272..425155,425672..425771,426909..427099,427328..427509,428193..428371,429177..429300,429622..429738,430769..430902,431188..431263,432235..432374,432946..433111,433487..433601,434152..434323,434919..434988,435162..435435))
location: region:414343-435435:-1
so has part: feature:435162-435435:-1:exon
so has part: feature:434919-434988:-1:exon
so has part: feature:434152-434323:-1:exon
so has part: feature:433487-433601:-1:exon
so has part: feature:432946-433111:-1:exon
so has part: feature:432235-432374:-1:exon
so has part: feature:431188-431263:-1:exon
so has part: feature:430769-430902:-1:exon
so has part: feature:429622-429738:-1:exon
so has part: feature:429177-429300:-1:exon
so has part: feature:428193-428371:-1:exon
so has part: feature:427328-427509:-1:exon
so has part: feature:426909-427099:-1:exon
so has part: feature:425672-425771:-1:exon
so has part: feature:424272-425155:-1:exon
so has part: feature:423630-423727:-1:exon
so has part: feature:422657-422754:-1:exon
so has part: feature:422173-422403:-1:exon
so has part: feature:421683-421780:-1:exon
so has part: feature:421163-421273:-1:exon
so has part: feature:420747-420864:-1:exon
so has part: feature:420094-420172:-1:exon
so has part: feature:419416-419543:-1:exon
so has part: feature:419009-419166:-1:exon
so has part: feature:418270-418654:-1:exon
so has part: feature:418027-418161:-1:exon
so has part: feature:417244-417358:-1:exon
so has part: feature:416551-416655:-1:exon
so has part: feature:416167-416270:-1:exon
so has part: feature:415924-415990:-1:exon
so has part: feature:414343-415070:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:435162-435435:-1:exon

position:435162:-1
position: 435162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:434919-434988:-1:exon

position:434919:-1
position: 434919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434988:-1
position: 434988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:434152-434323:-1:exon

position:434152:-1
position: 434152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434323:-1
position: 434323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:433487-433601:-1:exon

position:433487:-1
position: 433487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433601:-1
position: 433601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:432946-433111:-1:exon

position:432946:-1
position: 432946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433111:-1
position: 433111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:432235-432374:-1:exon

position:432235:-1
position: 432235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432374:-1
position: 432374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:431188-431263:-1:exon

position:431188:-1
position: 431188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431263:-1
position: 431263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:430769-430902:-1:exon

position:430769:-1
position: 430769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430902:-1
position: 430902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:429622-429738:-1:exon

position:429622:-1
position: 429622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429738:-1
position: 429738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:429177-429300:-1:exon

position:429177:-1
position: 429177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429300:-1
position: 429300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:428193-428371:-1:exon

position:428193:-1
position: 428193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428371:-1
position: 428371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:427328-427509:-1:exon

position:427328:-1
position: 427328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427509:-1
position: 427509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:426909-427099:-1:exon

position:426909:-1
position: 426909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427099:-1
position: 427099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:425672-425771:-1:exon

position:425672:-1
position: 425672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425771:-1
position: 425771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:424272-425155:-1:exon

position:424272:-1
position: 424272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425155:-1
position: 425155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:423630-423727:-1:exon

position:423630:-1
position: 423630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423727:-1
position: 423727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:422657-422754:-1:exon

position:422657:-1
position: 422657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422754:-1
position: 422754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:422173-422403:-1:exon

position:422173:-1
position: 422173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422403:-1
position: 422403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:421683-421780:-1:exon

position:421683:-1
position: 421683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421780:-1
position: 421780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:421163-421273:-1:exon

position:421163:-1
position: 421163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421273:-1
position: 421273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:420747-420864:-1:exon

position:420747:-1
position: 420747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420864:-1
position: 420864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:420094-420172:-1:exon

position:420094:-1
position: 420094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420172:-1
position: 420172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:419416-419543:-1:exon

position:419416:-1
position: 419416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419543:-1
position: 419543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:419009-419166:-1:exon

position:419009:-1
position: 419009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419166:-1
position: 419166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:418270-418654:-1:exon

position:418270:-1
position: 418270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418654:-1
position: 418654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:418027-418161:-1:exon

position:418027:-1
position: 418027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418161:-1
position: 418161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:417244-417358:-1:exon

position:417244:-1
position: 417244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417358:-1
position: 417358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:416551-416655:-1:exon

position:416551:-1
position: 416551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416655:-1
position: 416655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:416167-416270:-1:exon

position:416167:-1
position: 416167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416270:-1
position: 416270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:415924-415990:-1:exon

position:415924:-1
position: 415924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415990:-1
position: 415990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:414343-415070:-1:exon

position:415070:-1
position: 415070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tex14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: tex14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive serine/threonine-protein kinase TEX14
translation: MSHAGAPPVPCPVPLGQVKAPGRGAELHRHTLDRNLPKMEKLLRQGVDVDTANNLGQTPLFCAALLGLTSAVELLLQYGANPNHRCEDRSTPVHAAAFSCNPWLVSGLLEAGGDLRLHDQEGRTPEAWAREGPQEHSSRMLDFLQRCVACMQSFTQPSQARDSWMSRRSCKTLVPSPSLLERFRQGGSDLHVNRKPNSKLPSTVQCYGFGKLCAGGPSHATGFLACTPMIEDRELAQAEDEPLLSFSCGAFMSMTNYSWNGCRVTVKELQAHNAVHRGSRDCYLDLLIIEQEYCSQLFHPHLLQLLAVSVSADSLRPRLVFERVHIGSLYDLLHHRRAQFPVLRMDALLPVVLQVCDALVYLHCRSLVLRSLSSHAVLLVHPGVAKITGLHFMELRCCPCARVLSDSDGNPLRVNACLPLPPELYNWAAPEVIRGRPCTGKADLYSLCALLQELHTDAVPWGAVGPRGIRQAVEGGQALAADERIPPPYYALVRSGLQPRPQDRSPSLQDLRLQLRSDVKELSQSSRQRWGSCSAPAIVGAGGWVLETVQDPKDHRALPVQEGQPQRVLTDSAVHREILDQLGQLDRLLEGEHELRAGTGDGALEGHEGGGPGLGQALSDPPHAFRASEVSIREILPLDAHRLSLHHSLDSDSSRETGSDGTPTQDELEEEGEDPAQKPCEISQAISASVLNLKVSQVLLQQSESSLLNVQRARAALGRREVPSAVPWGQGERQLAVGREHVCGGGGLADEVDGRQSEKTEDSLDSGSEWGFSRAVGPPSHYRFAHPGYGVPARGWPSGLRRAAQSAAADEPPDWPAEHEDLSEGEGISDYSSALDDSFVTVRPGRAQAGRGSIAAAVAETGGQHSCREQCTVHRQGPQDRFTGFSRPTGPTQHRVSASGLSGCHRSAAAKWTSEVTQVVEKMTRGRLGSAAWTPSSESEDTEDRTSQFSHLCRPQGSGYKGSERPGHESQGSGSSQGSTKLERLFKSFAGVQSESESDAEFHTINRTFSLSARLLEDTGSRQEDVSSESEGAESPAEESDEFVTPIPGSELHKAGRQAQTQTPSSEEDLEVTEEVCRPSGRAVPAMAACDLRTGTTPTESSAVVSDPAERTDPAALQRVSYPTASCLPDIADLSSIVCEEEWPSREGQQPSPVKRNAPTCNSTPLHPGAVSRHHPRLGGEPAELLPPLHSLLDTFPWGSSPTQLHTADTFTTASAGMASPSDLSVSSALHPPRLDHSPVHRETDTPAGRCWDTPSAGTSAGRDGGSCAREGGPGDPGTAAAECRDATGEALSPAVDGQVTRSHDEPGSGMGAGAPGTQSPHSNSPAAAAEAPAGPLWAPGPDDHPTPKGPTGIEAVSPLSEKDLPGPSVLSGTGLLAYSRALDGLPAADARDLEGGQPPSAEAGSAGHGVRIEAPSDETLREGRSLLEETDRAHSTLDEVLQGMMGEKGSTQKSLRSPRPEQLPRIQESLYSEDTCCPAAAGGERAGKPEEPDSRTALGPADSVDEQGEKFEPGLRVHWAQPHRLIILEQTPTKSQSDPGPAMTTQPAARRDRD
SIO_010081: tex14
subclass of: SO_0000673
so part of: tex14
location: complement(join(414977..415070,415924..415990,416167..416270,416551..416655,417244..417358,418027..418161,418270..418654,419009..419166,419416..419543,420094..420172,420747..420864,421163..421273,421683..421780,422173..422403,422657..422754,423630..423727,424272..425155,425672..425771,426909..427099,427328..427509,428193..428371,429177..429300,429622..429738,430769..430902,431188..431263,432235..432374,432946..433111,433487..433601,434152..434287))
location: region:414977-434287:-1
so has part: feature:434152-434287:-1:exon
so has part: feature:433487-433601:-1:exon
so has part: feature:432946-433111:-1:exon
so has part: feature:432235-432374:-1:exon
so has part: feature:431188-431263:-1:exon
so has part: feature:430769-430902:-1:exon
so has part: feature:429622-429738:-1:exon
so has part: feature:429177-429300:-1:exon
so has part: feature:428193-428371:-1:exon
so has part: feature:427328-427509:-1:exon
so has part: feature:426909-427099:-1:exon
so has part: feature:425672-425771:-1:exon
so has part: feature:424272-425155:-1:exon
so has part: feature:423630-423727:-1:exon
so has part: feature:422657-422754:-1:exon
so has part: feature:422173-422403:-1:exon
so has part: feature:421683-421780:-1:exon
so has part: feature:421163-421273:-1:exon
so has part: feature:420747-420864:-1:exon
so has part: feature:420094-420172:-1:exon
so has part: feature:419416-419543:-1:exon
so has part: feature:419009-419166:-1:exon
so has part: feature:418270-418654:-1:exon
so has part: feature:418027-418161:-1:exon
so has part: feature:417244-417358:-1:exon
so has part: feature:416551-416655:-1:exon
so has part: feature:416167-416270:-1:exon
so has part: feature:415924-415990:-1:exon
so has part: feature:414977-415070:-1:exon

XP_015223309.1
type: Protein
SIO_000068: ncbiprotein

position:414977:-1
position: 414977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434287:-1
position: 434287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434152-434287:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433487-433601:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432946-433111:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432235-432374:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431188-431263:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:430769-430902:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429622-429738:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:429177-429300:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428193-428371:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:427328-427509:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:426909-427099:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:425672-425771:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:424272-425155:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:423630-423727:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:422657-422754:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:422173-422403:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:421683-421780:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:421163-421273:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:420747-420864:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:420094-420172:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:419416-419543:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:419009-419166:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:418270-418654:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:418027-418161:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:417244-417358:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:416551-416655:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:416167-416270:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:415924-415990:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:414977-415070:-1:exon

rad51c
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: rad51c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 435464..446224
location: region:435464-446224:1
so has part: feature:435464-446224:1:exon
subclass of: SO_0000010

102696220
type: Gene
SIO_000068: ncbigene

position:435464:1
position: 435464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446224:1
position: 446224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435464-446224:1:exon

rad51c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: rad51c
product: RAD51 paralog C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015367824.1
SIO_010081: rad51c
subclass of: SO_0000673
so part of: rad51c
location: join(435464..436889,437764..438004,438845..439002,439285..439418,439771..439902,440310..440376,441075..441135,442481..442541,444299..446224)
location: region:435464-446224:1
so has part: feature:435464-436889:1:exon
so has part: feature:437764-438004:1:exon
so has part: feature:438845-439002:1:exon
so has part: feature:439285-439418:1:exon
so has part: feature:439771-439902:1:exon
so has part: feature:440310-440376:1:exon
so has part: feature:441075-441135:1:exon
so has part: feature:442481-442541:1:exon
so has part: feature:444299-446224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:435464-436889:1:exon

position:436889:1
position: 436889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:437764-438004:1:exon

position:437764:1
position: 437764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438004:1
position: 438004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:438845-439002:1:exon

position:438845:1
position: 438845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439002:1
position: 439002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:439285-439418:1:exon

position:439285:1
position: 439285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439418:1
position: 439418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:439771-439902:1:exon

position:439771:1
position: 439771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439902:1
position: 439902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:440310-440376:1:exon

position:440310:1
position: 440310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440376:1
position: 440376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:441075-441135:1:exon

position:441075:1
position: 441075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441135:1
position: 441135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:442481-442541:1:exon

position:442481:1
position: 442481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442541:1
position: 442541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:444299-446224:1:exon

position:444299:1
position: 444299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rad51c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: rad51c
product: RAD51 paralog C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015367825.1
SIO_010081: rad51c
subclass of: SO_0000673
so part of: rad51c
location: join(435464..436889,437764..438004,438845..439002,439285..439418,439771..439902,440310..440376,440932..441074,442481..442541,444299..444415)
location: region:435464-444415:1
so has part: feature:435464-436889:1:exon
so has part: feature:437764-438004:1:exon
so has part: feature:438845-439002:1:exon
so has part: feature:439285-439418:1:exon
so has part: feature:439771-439902:1:exon
so has part: feature:440310-440376:1:exon
so has part: feature:440932-441074:1:exon
so has part: feature:442481-442541:1:exon
so has part: feature:444299-444415:1:exon

position:444415:1
position: 444415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435464-436889:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437764-438004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:438845-439002:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439285-439418:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:439771-439902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:440310-440376:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:440932-441074:1:exon

position:440932:1
position: 440932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441074:1
position: 441074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:442481-442541:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:444299-444415:1:exon

rad51c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: rad51c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA repair protein RAD51 homolog 3 isoform X1
translation: MQRDVSSLALAPGVKVKLIGAGFLSAGDLGELRPLELSREAGITQQEALEALEALRAARGEAEPGRGGRLTALELLQRERALGAVVTFCSALDRALGGGLPLGKTTEICGAPGVGKTQLCVQLAVDVQIPPCFGGLGGQAVYVDTEGSFLVQRAVDLAEAAVQHCGAVAGDAEQQEAMKEFTVETILSQLFLFRCHDYVELLAQTYLLPDFLSQHPKVRLVVIDSIAFPFRSNFEDLSLRTRLLNGLAQQLIQLATQHGVAVALTNQMTTKLGKSQSMLVPALGESWGHAATQRLLLHWEGPSRFASLYKSPSQREATVPFQITAQGFRDVPPADLQLPSADPSAAPSGDPPTSRKRPRADEGELSGSSRRPPAHEGQSLS
SIO_010081: rad51c
subclass of: SO_0000673
so part of: rad51c
location: join(436772..436889,437764..438004,438845..439002,439285..439418,439771..439902,440310..440376,441075..441135,442481..442541,444299..444472)
location: region:436772-444472:1
so has part: feature:436772-436889:1:exon
so has part: feature:437764-438004:1:exon
so has part: feature:438845-439002:1:exon
so has part: feature:439285-439418:1:exon
so has part: feature:439771-439902:1:exon
so has part: feature:440310-440376:1:exon
so has part: feature:441075-441135:1:exon
so has part: feature:442481-442541:1:exon
so has part: feature:444299-444472:1:exon

XP_015223310.1
type: Protein
SIO_000068: ncbiprotein

position:436772:1
position: 436772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444472:1
position: 444472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436772-436889:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437764-438004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:438845-439002:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439285-439418:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:439771-439902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:440310-440376:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:441075-441135:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:442481-442541:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:444299-444472:1:exon

rad51c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: rad51c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA repair protein RAD51 homolog 3 isoform X2
translation: MQRDVSSLALAPGVKVKLIGAGFLSAGDLGELRPLELSREAGITQQEALEALEALRAARGEAEPGRGGRLTALELLQRERALGAVVTFCSALDRALGGGLPLGKTTEICGAPGVGKTQLCVQLAVDVQIPPCFGGLGGQAVYVDTEGSFLVQRAVDLAEAAVQHCGAVAGDAEQQEAMKEFTVETILSQLFLFRCHDYVELLAQTYLLPDFLSQHPKVRLVVIDSIAFPFRSNFEDLSLRTRLLNGLAQQLIQLATQHGVAVALTNQMTTKLGKSQSMLVPALGEKPPKGELFGRGDHSSTRARAQTAPWGCCCGNGLGRSQPDCRAPSSQVRVAVQVSQPERGHRALPDHSSGLQGRPTC
SIO_010081: rad51c
subclass of: SO_0000673
so part of: rad51c
location: join(436772..436889,437764..438004,438845..439002,439285..439418,439771..439902,440310..440376,440932..441074,442481..442541,444299..444330)
location: region:436772-444330:1
so has part: feature:436772-436889:1:exon
so has part: feature:437764-438004:1:exon
so has part: feature:438845-439002:1:exon
so has part: feature:439285-439418:1:exon
so has part: feature:439771-439902:1:exon
so has part: feature:440310-440376:1:exon
so has part: feature:440932-441074:1:exon
so has part: feature:442481-442541:1:exon
so has part: feature:444299-444330:1:exon

XP_015223311.1
type: Protein
SIO_000068: ncbiprotein

position:444330:1
position: 444330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436772-436889:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437764-438004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:438845-439002:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439285-439418:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:439771-439902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:440310-440376:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:440932-441074:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:442481-442541:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:444299-444330:1:exon

ppm1e
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ppm1e
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 448472..494117
location: region:448472-494117:1
so has part: feature:448472-494117:1:exon
subclass of: SO_0000010

102696415
type: Gene
SIO_000068: ncbigene

position:448472:1
position: 448472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494117:1
position: 494117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448472-494117:1:exon

ppm1e
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ppm1e
product: protein phosphatase, Mg2+/Mn2+ dependent 1E, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015367642.1
SIO_010081: ppm1e
subclass of: SO_0000673
so part of: ppm1e
location: join(448472..450219,450382..450575,482465..482583,483369..483568,485457..485645,485818..485961,486664..486757,486894..494117)
location: region:448472-494117:1
so has part: feature:448472-450219:1:exon
so has part: feature:450382-450575:1:exon
so has part: feature:482465-482583:1:exon
so has part: feature:483369-483568:1:exon
so has part: feature:485457-485645:1:exon
so has part: feature:485818-485961:1:exon
so has part: feature:486664-486757:1:exon
so has part: feature:486894-494117:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:448472-450219:1:exon

position:450219:1
position: 450219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:450382-450575:1:exon

position:450382:1
position: 450382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450575:1
position: 450575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:482465-482583:1:exon

position:482465:1
position: 482465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482583:1
position: 482583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:483369-483568:1:exon

position:483369:1
position: 483369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483568:1
position: 483568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:485457-485645:1:exon

position:485457:1
position: 485457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485645:1
position: 485645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:485818-485961:1:exon

position:485818:1
position: 485818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485961:1
position: 485961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:486664-486757:1:exon

position:486664:1
position: 486664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486757:1
position: 486757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:486894-494117:1:exon

position:486894:1
position: 486894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ppm1e
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ppm1e
product: protein phosphatase, Mg2+/Mn2+ dependent 1E, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_006640944.2
SIO_010081: ppm1e
subclass of: SO_0000673
so part of: ppm1e
location: join(450289..450575,482465..482583,483369..483568,485457..485645,485818..485961,486664..486757,486894..494117)
location: region:450289-494117:1
so has part: feature:450289-450575:1:exon
so has part: feature:482465-482583:1:exon
so has part: feature:483369-483568:1:exon
so has part: feature:485457-485645:1:exon
so has part: feature:485818-485961:1:exon
so has part: feature:486664-486757:1:exon
so has part: feature:486894-494117:1:exon

position:450289:1
position: 450289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450289-450575:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:482465-482583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483369-483568:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485457-485645:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485818-485961:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:486664-486757:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:486894-494117:1:exon

ppm1e
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ppm1e
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1E isoform X1
translation: MAGSASEEKTFRRFLELFLREMRGALGDEEPLPLRPLPDLVSEDEVEGECLDLSLQHLCKYNCPFSLAAGLARATADEILQSDLSVHYVNKPADAADPYPQLESVKLARLVFNKLHEMCCLWLKDMPRRRRPQRFYETSIHAIKNMRRKMEDKHIVIPDFNMLFNLQDQEEQAYFAVFDGHGGVDAAIYASNHLHVNLVRQEMFSQDPSEALCRAFKLTDERFVQKASRENLRCGTTGVVTFLRGRTLHVAWLGDSQVMLVRRGQPVELMKPHKPDREDEKQRIEALGGCVIWFGAWRVNGSLSVSRAIGDSEHKPYICGDADHSSLPLDGSEDYLILACDGFYDTVSPDEAVRVVSDHLQENNGDSSMVAHKLVASARDAGSSDNITVIVVFLRDPRAPPPPEGLEEEEEEEEEEEEGLQQGELAGQDGGTEGGGGKGRGSWPLQQCSAPADLGYEDRMDSFTDRTSLSLGPELALGGGWLRLPAPDRPAVRTLAPLAAAWRPPGEEGPCAYRHAPWGPPPSVPSCQSPGPLGHWLEAAALFSRDRRPPRHLESALPRVGGRRGHRGAREPCLPRSLRGGAPYPRRCPERRPGVALPRVPQGCSV
SIO_010081: ppm1e
subclass of: SO_0000673
so part of: ppm1e
location: join(450394..450575,482465..482583,483369..483568,485457..485645,485818..485961,486664..486757,486894..487786)
location: region:450394-487786:1
so has part: feature:450394-450575:1:exon
so has part: feature:482465-482583:1:exon
so has part: feature:483369-483568:1:exon
so has part: feature:485457-485645:1:exon
so has part: feature:485818-485961:1:exon
so has part: feature:486664-486757:1:exon
so has part: feature:486894-487786:1:exon

XP_006641007.1
type: Protein
SIO_000068: ncbiprotein

position:450394:1
position: 450394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487786:1
position: 487786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450394-450575:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:482465-482583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483369-483568:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485457-485645:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485818-485961:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:486664-486757:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:486894-487786:1:exon

ppm1e
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ppm1e
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1E isoform X1
translation: MAGSASEEKTFRRFLELFLREMRGALGDEEPLPLRPLPDLVSEDEVEGECLDLSLQHLCKYNCPFSLAAGLARATADEILQSDLSVHYVNKPADAADPYPQLESVKLARLVFNKLHEMCCLWLKDMPRRRRPQRFYETSIHAIKNMRRKMEDKHIVIPDFNMLFNLQDQEEQAYFAVFDGHGGVDAAIYASNHLHVNLVRQEMFSQDPSEALCRAFKLTDERFVQKASRENLRCGTTGVVTFLRGRTLHVAWLGDSQVMLVRRGQPVELMKPHKPDREDEKQRIEALGGCVIWFGAWRVNGSLSVSRAIGDSEHKPYICGDADHSSLPLDGSEDYLILACDGFYDTVSPDEAVRVVSDHLQENNGDSSMVAHKLVASARDAGSSDNITVIVVFLRDPRAPPPPEGLEEEEEEEEEEEEGLQQGELAGQDGGTEGGGGKGRGSWPLQQCSAPADLGYEDRMDSFTDRTSLSLGPELALGGGWLRLPAPDRPAVRTLAPLAAAWRPPGEEGPCAYRHAPWGPPPSVPSCQSPGPLGHWLEAAALFSRDRRPPRHLESALPRVGGRRGHRGAREPCLPRSLRGGAPYPRRCPERRPGVALPRVPQGCSV
SIO_010081: ppm1e
subclass of: SO_0000673
so part of: ppm1e
location: join(450394..450575,482465..482583,483369..483568,485457..485645,485818..485961,486664..486757,486894..487786)
location: region:450394-487786:1
so has part: feature:450394-450575:1:exon
so has part: feature:482465-482583:1:exon
so has part: feature:483369-483568:1:exon
so has part: feature:485457-485645:1:exon
so has part: feature:485818-485961:1:exon
so has part: feature:486664-486757:1:exon
so has part: feature:486894-487786:1:exon

XP_015223128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450394-450575:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:482465-482583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483369-483568:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485457-485645:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485818-485961:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:486664-486757:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:486894-487786:1:exon

ppm1e
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ppm1e
product: protein phosphatase, Mg2+/Mn2+ dependent 1E, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015367644.1
SIO_010081: ppm1e
subclass of: SO_0000673
so part of: ppm1e
location: join(450517..450575,476683..477001,482465..482583,483369..483568,485457..485645,485818..485961,486664..486757,486894..494117)
location: region:450517-494117:1
so has part: feature:450517-450575:1:exon
so has part: feature:476683-477001:1:exon
so has part: feature:482465-482583:1:exon
so has part: feature:483369-483568:1:exon
so has part: feature:485457-485645:1:exon
so has part: feature:485818-485961:1:exon
so has part: feature:486664-486757:1:exon
so has part: feature:486894-494117:1:exon

position:450517:1
position: 450517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450517-450575:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476683-477001:1:exon

position:476683:1
position: 476683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477001:1
position: 477001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:482465-482583:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:483369-483568:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485457-485645:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:485818-485961:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:486664-486757:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:486894-494117:1:exon

ppm1e
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ppm1e
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1E isoform X2
translation: MQTPHRWVMKVGIKPWDAEPTRNCPFSLAAGLARATADEILQSDLSVHYVNKPADAADPYPQLESVKLARLVFNKLHEMCCLWLKDMPRRRRPQRFYETSIHAIKNMRRKMEDKHIVIPDFNMLFNLQDQEEQAYFAVFDGHGGVDAAIYASNHLHVNLVRQEMFSQDPSEALCRAFKLTDERFVQKASRENLRCGTTGVVTFLRGRTLHVAWLGDSQVMLVRRGQPVELMKPHKPDREDEKQRIEALGGCVIWFGAWRVNGSLSVSRAIGDSEHKPYICGDADHSSLPLDGSEDYLILACDGFYDTVSPDEAVRVVSDHLQENNGDSSMVAHKLVASARDAGSSDNITVIVVFLRDPRAPPPPEGLEEEEEEEEEEEEGLQQGELAGQDGGTEGGGGKGRGSWPLQQCSAPADLGYEDRMDSFTDRTSLSLGPELALGGGWLRLPAPDRPAVRTLAPLAAAWRPPGEEGPCAYRHAPWGPPPSVPSCQSPGPLGHWLEAAALFSRDRRPPRHLESALPRVGGRRGHRGAREPCLPRSLRGGAPYPRRCPERRPGVALPRVPQGCSV
SIO_010081: ppm1e
subclass of: SO_0000673
so part of: ppm1e
location: join(476937..477001,482465..482583,483369..483568,485457..485645,485818..485961,486664..486757,486894..487786)
location: region:476937-487786:1
so has part: feature:476937-477001:1:exon
so has part: feature:482465-482583:1:exon
so has part: feature:483369-483568:1:exon
so has part: feature:485457-485645:1:exon
so has part: feature:485818-485961:1:exon
so has part: feature:486664-486757:1:exon
so has part: feature:486894-487786:1:exon

XP_015223130.1
type: Protein
SIO_000068: ncbiprotein

position:476937:1
position: 476937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476937-477001:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:482465-482583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483369-483568:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485457-485645:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485818-485961:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:486664-486757:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:486894-487786:1:exon

trim37
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: trim37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(496398..529617)
location: region:496398-529617:-1
so has part: feature:496398-529617:-1:exon
subclass of: SO_0000010

102686854
type: Gene
SIO_000068: ncbigene

position:496398:-1
position: 496398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529617:-1
position: 529617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496398-529617:-1:exon

trim37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: trim37
product: tripartite motif containing 37, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015367638.1
SIO_010081: trim37
subclass of: SO_0000673
so part of: trim37
location: complement(join(496398..499589,499773..499919,500642..500751,501593..501779,502096..502254,502464..502769,503347..503535,504175..504257,507250..507386,508103..508303,508497..508611,509267..509446,509791..509867,510736..510817,511776..511826,515521..515645,516682..516747,519124..519191,519686..519809,520523..520645,523512..523599,524895..525011,525682..525722,526009..526110,527595..527734,529344..529617))
location: region:496398-529617:-1
so has part: feature:529344-529617:-1:exon
so has part: feature:527595-527734:-1:exon
so has part: feature:526009-526110:-1:exon
so has part: feature:525682-525722:-1:exon
so has part: feature:524895-525011:-1:exon
so has part: feature:523512-523599:-1:exon
so has part: feature:520523-520645:-1:exon
so has part: feature:519686-519809:-1:exon
so has part: feature:519124-519191:-1:exon
so has part: feature:516682-516747:-1:exon
so has part: feature:515521-515645:-1:exon
so has part: feature:511776-511826:-1:exon
so has part: feature:510736-510817:-1:exon
so has part: feature:509791-509867:-1:exon
so has part: feature:509267-509446:-1:exon
so has part: feature:508497-508611:-1:exon
so has part: feature:508103-508303:-1:exon
so has part: feature:507250-507386:-1:exon
so has part: feature:504175-504257:-1:exon
so has part: feature:503347-503535:-1:exon
so has part: feature:502464-502769:-1:exon
so has part: feature:502096-502254:-1:exon
so has part: feature:501593-501779:-1:exon
so has part: feature:500642-500751:-1:exon
so has part: feature:499773-499919:-1:exon
so has part: feature:496398-499589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529344-529617:-1:exon

position:529344:-1
position: 529344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:527595-527734:-1:exon

position:527595:-1
position: 527595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527734:-1
position: 527734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:526009-526110:-1:exon

position:526009:-1
position: 526009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526110:-1
position: 526110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:525682-525722:-1:exon

position:525682:-1
position: 525682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525722:-1
position: 525722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:524895-525011:-1:exon

position:524895:-1
position: 524895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525011:-1
position: 525011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:523512-523599:-1:exon

position:523512:-1
position: 523512
reference: sequence
type: ReverseStrandPosition
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SIO_000300: 21
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SIO_000300: 22
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SIO_000300: 23
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SIO_000300: 24
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SIO_000300: 25
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SIO_000300: 26
SIO_000628: feature:496398-499589:-1:exon

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trim37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: trim37
product: tripartite motif containing 37, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015367637.1
SIO_010081: trim37
subclass of: SO_0000673
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location: complement(join(496398..499589,499773..499919,500642..500751,501593..501779,502096..502254,502464..502769,503347..503535,504175..504257,507250..507386,508103..508303,508497..508611,509267..509446,509791..509867,510736..510817,511776..511826,515521..515645,516682..516747,519124..519191,519686..519809,520523..520645,523512..523599,524895..525011,525682..525722,526009..526110,527595..527734,529149..529617))
location: region:496398-529617:-1
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SIO_000300: 22
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SIO_000300: 23
SIO_000628: feature:501593-501779:-1:exon

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SIO_000300: 24
SIO_000628: feature:500642-500751:-1:exon

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SIO_000300: 25
SIO_000628: feature:499773-499919:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:496398-499589:-1:exon

trim37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: trim37
product: tripartite motif containing 37, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015367639.1
SIO_010081: trim37
subclass of: SO_0000673
so part of: trim37
location: complement(join(496398..499589,499773..499919,500642..500751,501593..501779,502096..502254,502464..502769,503347..503535,504175..504257,507250..507386,508103..508303,508497..508611,509267..509446,509791..509867,510736..510817,511776..511826,515521..515645,516682..516747,519124..519191,519686..519809,520523..520645,523512..523599,524895..525011,525682..525722,526009..526110,527649..527734,529149..529615))
location: region:496398-529615:-1
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position:529615:-1
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reference: sequence
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urn:…
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SIO_000628: feature:529149-529615:-1:exon

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SIO_000300: 25
SIO_000628: feature:499773-499919:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:496398-499589:-1:exon

trim37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: trim37
product: tripartite motif containing 37, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_015367640.1
SIO_010081: trim37
subclass of: SO_0000673
so part of: trim37
location: complement(join(496398..499589,499773..499919,500642..500751,501593..501779,502096..502254,502464..502769,503347..503535,504175..504257,507250..507386,508103..508303,508497..508611,509267..509446,509791..509867,510736..510817,511776..511826,515521..515645,519124..519191,519686..519809,520523..520645,523512..523599,524895..525011,525682..525722,526009..526110,527595..527734,529149..529615))
location: region:496398-529615:-1
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urn:…
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SIO_000300: 24
SIO_000628: feature:499773-499919:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:496398-499589:-1:exon

trim37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: trim37
product: tripartite motif containing 37, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015367641.1
SIO_010081: trim37
subclass of: SO_0000673
so part of: trim37
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location: region:496398-529613:-1
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so has part: feature:501593-501779:-1:exon
so has part: feature:500642-500751:-1:exon
so has part: feature:499773-499919:-1:exon
so has part: feature:496398-499589:-1:exon

position:529613:-1
position: 529613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529149-529613:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527649-527734:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526009-526110:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525682-525722:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:524895-525011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523512-523599:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:520523-520645:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519686-519809:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:519124-519191:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:515521-515645:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:511776-511826:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:510736-510817:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:509791-509867:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:509267-509446:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:508497-508611:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:508103-508303:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:507250-507386:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:504175-504257:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:503347-503535:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:502464-502769:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:502096-502254:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:501593-501779:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:500642-500751:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:499773-499919:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:496398-499589:-1:exon

trim37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: trim37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM37 isoform X4
translation: MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWAEEVTQQLDTLQLCNLSKHEENDKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRGAKDERVREIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISKSPEILLMFQQVHRKPMASFVTTPVPPDFTSELVPAYDSSTFVLANFSTLRQRADPVYSPPLQISGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPTKNIIREFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLVLRYQVRSPTFFQKCRDQYWYISQLEAAQTSYIQQINNLKERLAIELFRRQKSRSSSPPDRRLCPSASERDPRAGKGAVTEECTQAGAGEEKEEEEEEEEKTQQDDSNELSDGDLEVDCLTGDEELNPLDGSSTSGSSTATSNTEENDIDEETMSGENDVEYSGNLEMEEGELPEDVAGAAGGLNPSARSQRRGPAGLAAATSSSLLEIDPVILIQLLDLKDRSSVESLWGLQPRPPASVLHSAVPAHSRKERDRRPQAVRRSAPDSGVLIRLKAQMAEVRSKMSDVKCQLEARGAAVPVAGEPRAGLSGSLAEHAARADPDAPGRKPSELDLLSKSAVAGRHCRSGKKTASPKQELGGGVSGLLLRRAADSVDKELRGQLDCDSPSEARAAPGDTSSEGASKQRTVHSSPPSMGSACSSDKPSSSKNEDQAFGATGTDFFEISGLNGIVQMNKMRRVPTMGAGLLTDGTLDGDSEGTSEIRESLLALSEGSSSRLEESSLCQKQVIHLLPGMSSDSEIDCDTENEEETVALEAGDCRYDTRPLPVTGEQLSSEDLGFVIGEATER
SIO_010081: trim37
subclass of: SO_0000673
so part of: trim37
location: complement(join(499531..499589,499773..499919,500642..500751,501593..501779,502096..502254,502464..502769,503347..503535,504175..504257,507250..507386,508103..508303,508497..508611,509267..509446,509791..509867,510736..510817,511776..511826,515521..515645,519124..519191,519686..519809,520523..520645,523512..523599,524895..525011,525682..525722,526009..526110,527649..527669))
location: region:499531-527669:-1
so has part: feature:527649-527669:-1:exon
so has part: feature:526009-526110:-1:exon
so has part: feature:525682-525722:-1:exon
so has part: feature:524895-525011:-1:exon
so has part: feature:523512-523599:-1:exon
so has part: feature:520523-520645:-1:exon
so has part: feature:519686-519809:-1:exon
so has part: feature:519124-519191:-1:exon
so has part: feature:515521-515645:-1:exon
so has part: feature:511776-511826:-1:exon
so has part: feature:510736-510817:-1:exon
so has part: feature:509791-509867:-1:exon
so has part: feature:509267-509446:-1:exon
so has part: feature:508497-508611:-1:exon
so has part: feature:508103-508303:-1:exon
so has part: feature:507250-507386:-1:exon
so has part: feature:504175-504257:-1:exon
so has part: feature:503347-503535:-1:exon
so has part: feature:502464-502769:-1:exon
so has part: feature:502096-502254:-1:exon
so has part: feature:501593-501779:-1:exon
so has part: feature:500642-500751:-1:exon
so has part: feature:499773-499919:-1:exon
so has part: feature:499531-499589:-1:exon

XP_015223127.1
type: Protein
SIO_000068: ncbiprotein

position:499531:-1
position: 499531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527669:-1
position: 527669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527649-527669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526009-526110:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525682-525722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524895-525011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523512-523599:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:520523-520645:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:519686-519809:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519124-519191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:515521-515645:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:511776-511826:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:510736-510817:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:509791-509867:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:509267-509446:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:508497-508611:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:508103-508303:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:507250-507386:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:504175-504257:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:503347-503535:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:502464-502769:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:502096-502254:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:501593-501779:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:500642-500751:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:499773-499919:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:499531-499589:-1:exon

trim37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: trim37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM37 isoform X2
translation: MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWAEEVTQQLDTLQLCNLSKHEENDKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRGAKDERVREIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVEHQGILRCPLVCGGNCMRSLGGECELRSCSKSELISKSPEILLMFQQVHRKPMASFVTTPVPPDFTSELVPAYDSSTFVLANFSTLRQRADPVYSPPLQISGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPTKNIIREFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLVLRYQVRSPTFFQKCRDQYWYISQLEAAQTSYIQQINNLKERLAIELFRRQKSRSSSPPDRRLCPSASERDPRAGKGAVTEECTQAGAGEEKEEEEEEEEKTQQDDSNELSDGDLEVDCLTGDEELNPLDGSSTSGSSTATSNTEENDIDEETMSGENDVEYSGNLEMEEGELPEDVAGAAGGLNPSARSQRRGPAGLAAATSSSLLEIDPVILIQLLDLKDRSSVESLWGLQPRPPASVLHSAVPAHSRKERDRRPQAVRRSAPDSGVLIRLKAQMAEVRSKMSDVKCQLEARGAAVPVAGEPRAGLSGSLAEHAARADPDAPGRKPSELDLLSKSAVAGRHCRSGKKTASPKQELGGGVSGLLLRRAADSVDKELRGQLDCDSPSEARAAPGDTSSEGASKQRTVHSSPPSMGSACSSDKPSSSKNEDQAFGATGTDFFEISGLNGIVQMNKMRRVPTMGAGLLTDGTLDGDSEGTSEIRESLLALSEGSSSRLEESSLCQKQVIHLLPGMSSDSEIDCDTENEEETVALEAGDCRYDTRPLPVTGEQLSSEDLGFVIGEATER
SIO_010081: trim37
subclass of: SO_0000673
so part of: trim37
location: complement(join(499531..499589,499773..499919,500642..500751,501593..501779,502096..502254,502464..502769,503347..503535,504175..504257,507250..507386,508103..508303,508497..508611,509267..509446,509791..509867,510736..510817,511776..511826,515521..515645,516682..516747,519124..519191,519686..519809,520523..520645,523512..523599,524895..525011,525682..525722,526009..526110,527649..527669))
location: region:499531-527669:-1
so has part: feature:527649-527669:-1:exon
so has part: feature:526009-526110:-1:exon
so has part: feature:525682-525722:-1:exon
so has part: feature:524895-525011:-1:exon
so has part: feature:523512-523599:-1:exon
so has part: feature:520523-520645:-1:exon
so has part: feature:519686-519809:-1:exon
so has part: feature:519124-519191:-1:exon
so has part: feature:516682-516747:-1:exon
so has part: feature:515521-515645:-1:exon
so has part: feature:511776-511826:-1:exon
so has part: feature:510736-510817:-1:exon
so has part: feature:509791-509867:-1:exon
so has part: feature:509267-509446:-1:exon
so has part: feature:508497-508611:-1:exon
so has part: feature:508103-508303:-1:exon
so has part: feature:507250-507386:-1:exon
so has part: feature:504175-504257:-1:exon
so has part: feature:503347-503535:-1:exon
so has part: feature:502464-502769:-1:exon
so has part: feature:502096-502254:-1:exon
so has part: feature:501593-501779:-1:exon
so has part: feature:500642-500751:-1:exon
so has part: feature:499773-499919:-1:exon
so has part: feature:499531-499589:-1:exon

XP_015223125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527649-527669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526009-526110:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525682-525722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524895-525011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523512-523599:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:520523-520645:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:519686-519809:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519124-519191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:516682-516747:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:515521-515645:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:511776-511826:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:510736-510817:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:509791-509867:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:509267-509446:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:508497-508611:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:508103-508303:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:507250-507386:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:504175-504257:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:503347-503535:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:502464-502769:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:502096-502254:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:501593-501779:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:500642-500751:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:499773-499919:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:499531-499589:-1:exon

trim37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: trim37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM37 isoform X3
translation: MDEQSVEVGQNVGVRVAGSPGSACFSIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWAEEVTQQLDTLQLCNLSKHEENDKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRGAKDERVREIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISKSPEILLMFQQVHRKPMASFVTTPVPPDFTSELVPAYDSSTFVLANFSTLRQRADPVYSPPLQISGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPTKNIIREFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLVLRYQVRSPTFFQKCRDQYWYISQLEAAQTSYIQQINNLKERLAIELFRRQKSRSSSPPDRRLCPSASERDPRAGKGAVTEECTQAGAGEEKEEEEEEEEKTQQDDSNELSDGDLEVDCLTGDEELNPLDGSSTSGSSTATSNTEENDIDEETMSGENDVEYSGNLEMEEGELPEDVAGAAGGLNPSARSQRRGPAGLAAATSSSLLEIDPVILIQLLDLKDRSSVESLWGLQPRPPASVLHSAVPAHSRKERDRRPQAVRRSAPDSGVLIRLKAQMAEVRSKMSDVKCQLEARGAAVPVAGEPRAGLSGSLAEHAARADPDAPGRKPSELDLLSKSAVAGRHCRSGKKTASPKQELGGGVSGLLLRRAADSVDKELRGQLDCDSPSEARAAPGDTSSEGASKQRTVHSSPPSMGSACSSDKPSSSKNEDQAFGATGTDFFEISGLNGIVQMNKMRRVPTMGAGLLTDGTLDGDSEGTSEIRESLLALSEGSSSRLEESSLCQKQVIHLLPGMSSDSEIDCDTENEEETVALEAGDCRYDTRPLPVTGEQLSSEDLGFVIGEATER
SIO_010081: trim37
subclass of: SO_0000673
so part of: trim37
location: complement(join(499531..499589,499773..499919,500642..500751,501593..501779,502096..502254,502464..502769,503347..503535,504175..504257,507250..507386,508103..508303,508497..508611,509267..509446,509791..509867,510736..510817,511776..511826,515521..515645,519124..519191,519686..519809,520523..520645,523512..523599,524895..525011,525682..525722,526009..526110,527595..527669))
location: region:499531-527669:-1
so has part: feature:527595-527669:-1:exon
so has part: feature:526009-526110:-1:exon
so has part: feature:525682-525722:-1:exon
so has part: feature:524895-525011:-1:exon
so has part: feature:523512-523599:-1:exon
so has part: feature:520523-520645:-1:exon
so has part: feature:519686-519809:-1:exon
so has part: feature:519124-519191:-1:exon
so has part: feature:515521-515645:-1:exon
so has part: feature:511776-511826:-1:exon
so has part: feature:510736-510817:-1:exon
so has part: feature:509791-509867:-1:exon
so has part: feature:509267-509446:-1:exon
so has part: feature:508497-508611:-1:exon
so has part: feature:508103-508303:-1:exon
so has part: feature:507250-507386:-1:exon
so has part: feature:504175-504257:-1:exon
so has part: feature:503347-503535:-1:exon
so has part: feature:502464-502769:-1:exon
so has part: feature:502096-502254:-1:exon
so has part: feature:501593-501779:-1:exon
so has part: feature:500642-500751:-1:exon
so has part: feature:499773-499919:-1:exon
so has part: feature:499531-499589:-1:exon

XP_015223126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527595-527669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526009-526110:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525682-525722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524895-525011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523512-523599:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:520523-520645:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:519686-519809:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519124-519191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:515521-515645:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:511776-511826:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:510736-510817:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:509791-509867:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:509267-509446:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:508497-508611:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:508103-508303:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:507250-507386:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:504175-504257:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:503347-503535:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:502464-502769:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:502096-502254:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:501593-501779:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:500642-500751:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:499773-499919:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:499531-499589:-1:exon

trim37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: trim37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM37 isoform X1
translation: MDEQSVEVGQNVGVRVAGSPGSACFSIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWAEEVTQQLDTLQLCNLSKHEENDKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRGAKDERVREIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVEHQGILRCPLVCGGNCMRSLGGECELRSCSKSELISKSPEILLMFQQVHRKPMASFVTTPVPPDFTSELVPAYDSSTFVLANFSTLRQRADPVYSPPLQISGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPTKNIIREFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLVLRYQVRSPTFFQKCRDQYWYISQLEAAQTSYIQQINNLKERLAIELFRRQKSRSSSPPDRRLCPSASERDPRAGKGAVTEECTQAGAGEEKEEEEEEEEKTQQDDSNELSDGDLEVDCLTGDEELNPLDGSSTSGSSTATSNTEENDIDEETMSGENDVEYSGNLEMEEGELPEDVAGAAGGLNPSARSQRRGPAGLAAATSSSLLEIDPVILIQLLDLKDRSSVESLWGLQPRPPASVLHSAVPAHSRKERDRRPQAVRRSAPDSGVLIRLKAQMAEVRSKMSDVKCQLEARGAAVPVAGEPRAGLSGSLAEHAARADPDAPGRKPSELDLLSKSAVAGRHCRSGKKTASPKQELGGGVSGLLLRRAADSVDKELRGQLDCDSPSEARAAPGDTSSEGASKQRTVHSSPPSMGSACSSDKPSSSKNEDQAFGATGTDFFEISGLNGIVQMNKMRRVPTMGAGLLTDGTLDGDSEGTSEIRESLLALSEGSSSRLEESSLCQKQVIHLLPGMSSDSEIDCDTENEEETVALEAGDCRYDTRPLPVTGEQLSSEDLGFVIGEATER
SIO_010081: trim37
subclass of: SO_0000673
so part of: trim37
location: complement(join(499531..499589,499773..499919,500642..500751,501593..501779,502096..502254,502464..502769,503347..503535,504175..504257,507250..507386,508103..508303,508497..508611,509267..509446,509791..509867,510736..510817,511776..511826,515521..515645,516682..516747,519124..519191,519686..519809,520523..520645,523512..523599,524895..525011,525682..525722,526009..526110,527595..527669))
location: region:499531-527669:-1
so has part: feature:527595-527669:-1:exon
so has part: feature:526009-526110:-1:exon
so has part: feature:525682-525722:-1:exon
so has part: feature:524895-525011:-1:exon
so has part: feature:523512-523599:-1:exon
so has part: feature:520523-520645:-1:exon
so has part: feature:519686-519809:-1:exon
so has part: feature:519124-519191:-1:exon
so has part: feature:516682-516747:-1:exon
so has part: feature:515521-515645:-1:exon
so has part: feature:511776-511826:-1:exon
so has part: feature:510736-510817:-1:exon
so has part: feature:509791-509867:-1:exon
so has part: feature:509267-509446:-1:exon
so has part: feature:508497-508611:-1:exon
so has part: feature:508103-508303:-1:exon
so has part: feature:507250-507386:-1:exon
so has part: feature:504175-504257:-1:exon
so has part: feature:503347-503535:-1:exon
so has part: feature:502464-502769:-1:exon
so has part: feature:502096-502254:-1:exon
so has part: feature:501593-501779:-1:exon
so has part: feature:500642-500751:-1:exon
so has part: feature:499773-499919:-1:exon
so has part: feature:499531-499589:-1:exon

XP_015223123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527595-527669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526009-526110:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525682-525722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524895-525011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523512-523599:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:520523-520645:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:519686-519809:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519124-519191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:516682-516747:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:515521-515645:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:511776-511826:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:510736-510817:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:509791-509867:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:509267-509446:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:508497-508611:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:508103-508303:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:507250-507386:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:504175-504257:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:503347-503535:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:502464-502769:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:502096-502254:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:501593-501779:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:500642-500751:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:499773-499919:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:499531-499589:-1:exon

trim37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: trim37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM37 isoform X1
translation: MDEQSVEVGQNVGVRVAGSPGSACFSIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWAEEVTQQLDTLQLCNLSKHEENDKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRGAKDERVREIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVEHQGILRCPLVCGGNCMRSLGGECELRSCSKSELISKSPEILLMFQQVHRKPMASFVTTPVPPDFTSELVPAYDSSTFVLANFSTLRQRADPVYSPPLQISGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPTKNIIREFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLVLRYQVRSPTFFQKCRDQYWYISQLEAAQTSYIQQINNLKERLAIELFRRQKSRSSSPPDRRLCPSASERDPRAGKGAVTEECTQAGAGEEKEEEEEEEEKTQQDDSNELSDGDLEVDCLTGDEELNPLDGSSTSGSSTATSNTEENDIDEETMSGENDVEYSGNLEMEEGELPEDVAGAAGGLNPSARSQRRGPAGLAAATSSSLLEIDPVILIQLLDLKDRSSVESLWGLQPRPPASVLHSAVPAHSRKERDRRPQAVRRSAPDSGVLIRLKAQMAEVRSKMSDVKCQLEARGAAVPVAGEPRAGLSGSLAEHAARADPDAPGRKPSELDLLSKSAVAGRHCRSGKKTASPKQELGGGVSGLLLRRAADSVDKELRGQLDCDSPSEARAAPGDTSSEGASKQRTVHSSPPSMGSACSSDKPSSSKNEDQAFGATGTDFFEISGLNGIVQMNKMRRVPTMGAGLLTDGTLDGDSEGTSEIRESLLALSEGSSSRLEESSLCQKQVIHLLPGMSSDSEIDCDTENEEETVALEAGDCRYDTRPLPVTGEQLSSEDLGFVIGEATER
SIO_010081: trim37
subclass of: SO_0000673
so part of: trim37
location: complement(join(499531..499589,499773..499919,500642..500751,501593..501779,502096..502254,502464..502769,503347..503535,504175..504257,507250..507386,508103..508303,508497..508611,509267..509446,509791..509867,510736..510817,511776..511826,515521..515645,516682..516747,519124..519191,519686..519809,520523..520645,523512..523599,524895..525011,525682..525722,526009..526110,527595..527669))
location: region:499531-527669:-1
so has part: feature:527595-527669:-1:exon
so has part: feature:526009-526110:-1:exon
so has part: feature:525682-525722:-1:exon
so has part: feature:524895-525011:-1:exon
so has part: feature:523512-523599:-1:exon
so has part: feature:520523-520645:-1:exon
so has part: feature:519686-519809:-1:exon
so has part: feature:519124-519191:-1:exon
so has part: feature:516682-516747:-1:exon
so has part: feature:515521-515645:-1:exon
so has part: feature:511776-511826:-1:exon
so has part: feature:510736-510817:-1:exon
so has part: feature:509791-509867:-1:exon
so has part: feature:509267-509446:-1:exon
so has part: feature:508497-508611:-1:exon
so has part: feature:508103-508303:-1:exon
so has part: feature:507250-507386:-1:exon
so has part: feature:504175-504257:-1:exon
so has part: feature:503347-503535:-1:exon
so has part: feature:502464-502769:-1:exon
so has part: feature:502096-502254:-1:exon
so has part: feature:501593-501779:-1:exon
so has part: feature:500642-500751:-1:exon
so has part: feature:499773-499919:-1:exon
so has part: feature:499531-499589:-1:exon

XP_015223124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527595-527669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526009-526110:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525682-525722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524895-525011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523512-523599:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:520523-520645:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:519686-519809:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519124-519191:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:516682-516747:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:515521-515645:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:511776-511826:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:510736-510817:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:509791-509867:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:509267-509446:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:508497-508611:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:508103-508303:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:507250-507386:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:504175-504257:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:503347-503535:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:502464-502769:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:502096-502254:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:501593-501779:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:500642-500751:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:499773-499919:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:499531-499589:-1:exon

LOC102696605
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102696605
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(531600..535281)
location: region:531600-535281:-1
so has part: feature:531600-535281:-1:exon
subclass of: SO_0000010

102696605
type: Gene
SIO_000068: ncbigene

position:531600:-1
position: 531600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535281:-1
position: 535281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531600-535281:-1:exon

LOC102696605
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102696605
product: high affinity immunoglobulin gamma Fc receptor I-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_006640945.2
SIO_010081: LOC102696605
subclass of: SO_0000673
so part of: LOC102696605
location: complement(join(531600..532139,532476..532763,532888..533154,533564..533851,534416..534451,534821..535281))
location: region:531600-535281:-1
so has part: feature:534821-535281:-1:exon
so has part: feature:534416-534451:-1:exon
so has part: feature:533564-533851:-1:exon
so has part: feature:532888-533154:-1:exon
so has part: feature:532476-532763:-1:exon
so has part: feature:531600-532139:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534821-535281:-1:exon

position:534821:-1
position: 534821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:534416-534451:-1:exon

position:534416:-1
position: 534416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534451:-1
position: 534451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:533564-533851:-1:exon

position:533564:-1
position: 533564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533851:-1
position: 533851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:532888-533154:-1:exon

position:532888:-1
position: 532888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533154:-1
position: 533154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:532476-532763:-1:exon

position:532476:-1
position: 532476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532763:-1
position: 532763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:531600-532139:-1:exon

position:532139:-1
position: 532139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102696605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102696605
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high affinity immunoglobulin gamma Fc receptor I-like
translation: MDLLLSLLVVSAVTPSVVLQDRPRSAVLHLSAGAPEVFIGETVTLTCRVPGEPSGWTFVWYKDGAPVQQLGTVGEGRYTLRPTLPHHGGQYSCQGLRARAWPQRSLPSEPISIRVTGGWVILQTPPQPLLRGAGATLTCRVRGNPRLQQVVFHKDGRVLARQSGPQLHLASLSPRDEGLYGCRATWGKRWGWKTAESPEVGVSVRDLLSEPVMEVLTETPVQRGQDLVLRCRAQLTPRRPGLRLRYSFQRGGQRLGVASSQDRHVVRSAAARHSGRYWCRATVDGLGLGKSSEPVLVRVIEDEEAELESTGPSRPEHPTDPTQAQNSPGSSQSPSPETSPSSFWNLTESSAWEAMTPGNTTL
SIO_010081: LOC102696605
subclass of: SO_0000673
so part of: LOC102696605
location: complement(join(531955..532139,532476..532763,532888..533154,533564..533851,534416..534451,534821..534845))
location: region:531955-534845:-1
so has part: feature:534821-534845:-1:exon
so has part: feature:534416-534451:-1:exon
so has part: feature:533564-533851:-1:exon
so has part: feature:532888-533154:-1:exon
so has part: feature:532476-532763:-1:exon
so has part: feature:531955-532139:-1:exon

XP_006641008.2
type: Protein
SIO_000068: ncbiprotein

position:531955:-1
position: 531955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534845:-1
position: 534845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534821-534845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:534416-534451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:533564-533851:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532888-533154:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:532476-532763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531955-532139:-1:exon

rabgef1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: rabgef1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(537417..559426)
location: region:537417-559426:-1
so has part: feature:537417-559426:-1:exon
subclass of: SO_0000010

102687054
type: Gene
SIO_000068: ncbigene

position:537417:-1
position: 537417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559426:-1
position: 559426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537417-559426:-1:exon

rabgef1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: rabgef1
product: RAB guanine nucleotide exchange factor (GEF) 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015367791.1
SIO_010081: rabgef1
subclass of: SO_0000673
so part of: rabgef1
location: complement(join(537417..541620,542057..542313,543387..543478,543817..543949,544571..544652,545919..546085,548404..548424,549067..549174,550787..550956,551073..551255,558621..559426))
location: region:537417-559426:-1
so has part: feature:558621-559426:-1:exon
so has part: feature:551073-551255:-1:exon
so has part: feature:550787-550956:-1:exon
so has part: feature:549067-549174:-1:exon
so has part: feature:548404-548424:-1:exon
so has part: feature:545919-546085:-1:exon
so has part: feature:544571-544652:-1:exon
so has part: feature:543817-543949:-1:exon
so has part: feature:543387-543478:-1:exon
so has part: feature:542057-542313:-1:exon
so has part: feature:537417-541620:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:558621-559426:-1:exon

position:558621:-1
position: 558621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:551073-551255:-1:exon

position:551073:-1
position: 551073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551255:-1
position: 551255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:550787-550956:-1:exon

position:550787:-1
position: 550787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550956:-1
position: 550956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:549067-549174:-1:exon

position:549067:-1
position: 549067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549174:-1
position: 549174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:548404-548424:-1:exon

position:548404:-1
position: 548404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548424:-1
position: 548424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:545919-546085:-1:exon

position:545919:-1
position: 545919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546085:-1
position: 546085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:544571-544652:-1:exon

position:544571:-1
position: 544571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544652:-1
position: 544652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:543817-543949:-1:exon

position:543817:-1
position: 543817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543949:-1
position: 543949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:543387-543478:-1:exon

position:543387:-1
position: 543387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543478:-1
position: 543478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:542057-542313:-1:exon

position:542057:-1
position: 542057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542313:-1
position: 542313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:537417-541620:-1:exon

position:541620:-1
position: 541620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rabgef1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: rabgef1
product: RAB guanine nucleotide exchange factor (GEF) 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015367793.1
SIO_010081: rabgef1
subclass of: SO_0000673
so part of: rabgef1
location: complement(join(537417..541620,542057..542313,543387..543478,543817..543949,544571..544652,545919..546085,549067..549174,550787..550956,551073..551255,558621..559425))
location: region:537417-559425:-1
so has part: feature:558621-559425:-1:exon
so has part: feature:551073-551255:-1:exon
so has part: feature:550787-550956:-1:exon
so has part: feature:549067-549174:-1:exon
so has part: feature:545919-546085:-1:exon
so has part: feature:544571-544652:-1:exon
so has part: feature:543817-543949:-1:exon
so has part: feature:543387-543478:-1:exon
so has part: feature:542057-542313:-1:exon
so has part: feature:537417-541620:-1:exon

position:559425:-1
position: 559425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558621-559425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551073-551255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:550787-550956:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549067-549174:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:545919-546085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544571-544652:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543817-543949:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:543387-543478:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:542057-542313:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:537417-541620:-1:exon

rabgef1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: rabgef1
product: RAB guanine nucleotide exchange factor (GEF) 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006640803.2
SIO_010081: rabgef1
subclass of: SO_0000673
so part of: rabgef1
location: complement(join(537417..541620,542057..542313,543387..543478,543817..543949,544571..544652,545919..546085,550787..550956,551073..551255,558621..559252))
location: region:537417-559252:-1
so has part: feature:558621-559252:-1:exon
so has part: feature:551073-551255:-1:exon
so has part: feature:550787-550956:-1:exon
so has part: feature:545919-546085:-1:exon
so has part: feature:544571-544652:-1:exon
so has part: feature:543817-543949:-1:exon
so has part: feature:543387-543478:-1:exon
so has part: feature:542057-542313:-1:exon
so has part: feature:537417-541620:-1:exon

position:559252:-1
position: 559252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558621-559252:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551073-551255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:550787-550956:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545919-546085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544571-544652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543817-543949:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543387-543478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:542057-542313:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:537417-541620:-1:exon

rabgef1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: rabgef1
product: RAB guanine nucleotide exchange factor (GEF) 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015367792.1
SIO_010081: rabgef1
subclass of: SO_0000673
so part of: rabgef1
location: complement(join(537417..541620,542057..542313,543387..543478,543817..543949,544571..544652,545919..546085,548404..548424,549067..549174,550787..550956,551073..551255,557780..558538))
location: region:537417-558538:-1
so has part: feature:557780-558538:-1:exon
so has part: feature:551073-551255:-1:exon
so has part: feature:550787-550956:-1:exon
so has part: feature:549067-549174:-1:exon
so has part: feature:548404-548424:-1:exon
so has part: feature:545919-546085:-1:exon
so has part: feature:544571-544652:-1:exon
so has part: feature:543817-543949:-1:exon
so has part: feature:543387-543478:-1:exon
so has part: feature:542057-542313:-1:exon
so has part: feature:537417-541620:-1:exon

position:558538:-1
position: 558538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557780-558538:-1:exon

position:557780:-1
position: 557780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:551073-551255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:550787-550956:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549067-549174:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548404-548424:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545919-546085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:544571-544652:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:543817-543949:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543387-543478:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:542057-542313:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:537417-541620:-1:exon

rabgef1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: rabgef1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab5 GDP/GTP exchange factor isoform X3
translation: MSQKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYQRARQKQIQEDWALAERLQREEEAAYASSQGAQSQPSLAPFSKFEEKKSNEKTRKVTTVKKFFSPSSRTASKKESQETKTPSPSISRQASMETDRVSRDFIDFLKGLQKPGREIHKQCRAFVESMGNKKDLSAEELSECVQDFYQNMADRLLSHFKGSTERVERVMDQVEKYLMTRLYKNVFCPETTDDEKKDLAVQKRIRALHWVTIQMLCVPVNEDIPEVSDNVVKAITDVIEMDSKRVPRDKLACITRCSKHIFNAIKITKSEPASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSPEDFERYMSGQASPRRQEPEAWPPPAGGSPALAQVYQSLELLSGLGARQERVLEGARRLEGDLIDWRAGVEREVQDILDRHPLDLRLPPASAIDSDNVENDRLPPPLQPQVFAG
SIO_010081: rabgef1
subclass of: SO_0000673
so part of: rabgef1
location: complement(join(541222..541620,542057..542313,543387..543478,543817..543949,544571..544652,545919..546085,550787..550956,551073..551251))
location: region:541222-551251:-1
so has part: feature:551073-551251:-1:exon
so has part: feature:550787-550956:-1:exon
so has part: feature:545919-546085:-1:exon
so has part: feature:544571-544652:-1:exon
so has part: feature:543817-543949:-1:exon
so has part: feature:543387-543478:-1:exon
so has part: feature:542057-542313:-1:exon
so has part: feature:541222-541620:-1:exon

XP_006640866.1
type: Protein
SIO_000068: ncbiprotein

position:541222:-1
position: 541222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551251:-1
position: 551251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551073-551251:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550787-550956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:545919-546085:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:544571-544652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543817-543949:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543387-543478:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:542057-542313:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541222-541620:-1:exon

rabgef1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: rabgef1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab5 GDP/GTP exchange factor isoform X2
translation: MSQKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYQRARQKQIQEDWALAERLQREEEAAYASSQGAQSQPSLAPFSKFEEKKSNEKTRKVTTVKKFFSPSSRTASKKAPPEKAPSGRERHAETLLRDLRDIFTPPWELASPTEESQETKTPSPSISRQASMETDRVSRDFIDFLKGLQKPGREIHKQCRAFVESMGNKKDLSAEELSECVQDFYQNMADRLLSHFKGSTERVERVMDQVEKYLMTRLYKNVFCPETTDDEKKDLAVQKRIRALHWVTIQMLCVPVNEDIPEVSDNVVKAITDVIEMDSKRVPRDKLACITRCSKHIFNAIKITKSEPASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSPEDFERYMSGQASPRRQEPEAWPPPAGGSPALAQVYQSLELLSGLGARQERVLEGARRLEGDLIDWRAGVEREVQDILDRHPLDLRLPPASAIDSDNVENDRLPPPLQPQVFAG
SIO_010081: rabgef1
subclass of: SO_0000673
so part of: rabgef1
location: complement(join(541222..541620,542057..542313,543387..543478,543817..543949,544571..544652,545919..546085,549067..549174,550787..550956,551073..551251))
location: region:541222-551251:-1
so has part: feature:551073-551251:-1:exon
so has part: feature:550787-550956:-1:exon
so has part: feature:549067-549174:-1:exon
so has part: feature:545919-546085:-1:exon
so has part: feature:544571-544652:-1:exon
so has part: feature:543817-543949:-1:exon
so has part: feature:543387-543478:-1:exon
so has part: feature:542057-542313:-1:exon
so has part: feature:541222-541620:-1:exon

XP_015223279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:551073-551251:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550787-550956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:549067-549174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545919-546085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544571-544652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543817-543949:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543387-543478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:542057-542313:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:541222-541620:-1:exon

rabgef1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: rabgef1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab5 GDP/GTP exchange factor isoform X1
translation: MSQKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYQRARQKQIQEDWALAERLQREEEAAYASSQGAQSQPSLAPFSKFEEKKSNEKTRKVTTVKKFFSPSSRTASKKAPPEKAPSGRERHAETLLRDLRDIFTPPWELASPTEALVARLRESQETKTPSPSISRQASMETDRVSRDFIDFLKGLQKPGREIHKQCRAFVESMGNKKDLSAEELSECVQDFYQNMADRLLSHFKGSTERVERVMDQVEKYLMTRLYKNVFCPETTDDEKKDLAVQKRIRALHWVTIQMLCVPVNEDIPEVSDNVVKAITDVIEMDSKRVPRDKLACITRCSKHIFNAIKITKSEPASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSPEDFERYMSGQASPRRQEPEAWPPPAGGSPALAQVYQSLELLSGLGARQERVLEGARRLEGDLIDWRAGVEREVQDILDRHPLDLRLPPASAIDSDNVENDRLPPPLQPQVFAG
SIO_010081: rabgef1
subclass of: SO_0000673
so part of: rabgef1
location: complement(join(541222..541620,542057..542313,543387..543478,543817..543949,544571..544652,545919..546085,548404..548424,549067..549174,550787..550956,551073..551251))
location: region:541222-551251:-1
so has part: feature:551073-551251:-1:exon
so has part: feature:550787-550956:-1:exon
so has part: feature:549067-549174:-1:exon
so has part: feature:548404-548424:-1:exon
so has part: feature:545919-546085:-1:exon
so has part: feature:544571-544652:-1:exon
so has part: feature:543817-543949:-1:exon
so has part: feature:543387-543478:-1:exon
so has part: feature:542057-542313:-1:exon
so has part: feature:541222-541620:-1:exon

XP_015223277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:551073-551251:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550787-550956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:549067-549174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:548404-548424:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:545919-546085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544571-544652:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543817-543949:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:543387-543478:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:542057-542313:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:541222-541620:-1:exon

rabgef1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: rabgef1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab5 GDP/GTP exchange factor isoform X1
translation: MSQKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYQRARQKQIQEDWALAERLQREEEAAYASSQGAQSQPSLAPFSKFEEKKSNEKTRKVTTVKKFFSPSSRTASKKAPPEKAPSGRERHAETLLRDLRDIFTPPWELASPTEALVARLRESQETKTPSPSISRQASMETDRVSRDFIDFLKGLQKPGREIHKQCRAFVESMGNKKDLSAEELSECVQDFYQNMADRLLSHFKGSTERVERVMDQVEKYLMTRLYKNVFCPETTDDEKKDLAVQKRIRALHWVTIQMLCVPVNEDIPEVSDNVVKAITDVIEMDSKRVPRDKLACITRCSKHIFNAIKITKSEPASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSPEDFERYMSGQASPRRQEPEAWPPPAGGSPALAQVYQSLELLSGLGARQERVLEGARRLEGDLIDWRAGVEREVQDILDRHPLDLRLPPASAIDSDNVENDRLPPPLQPQVFAG
SIO_010081: rabgef1
subclass of: SO_0000673
so part of: rabgef1
location: complement(join(541222..541620,542057..542313,543387..543478,543817..543949,544571..544652,545919..546085,548404..548424,549067..549174,550787..550956,551073..551251))
location: region:541222-551251:-1
so has part: feature:551073-551251:-1:exon
so has part: feature:550787-550956:-1:exon
so has part: feature:549067-549174:-1:exon
so has part: feature:548404-548424:-1:exon
so has part: feature:545919-546085:-1:exon
so has part: feature:544571-544652:-1:exon
so has part: feature:543817-543949:-1:exon
so has part: feature:543387-543478:-1:exon
so has part: feature:542057-542313:-1:exon
so has part: feature:541222-541620:-1:exon

XP_015223278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:551073-551251:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550787-550956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:549067-549174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:548404-548424:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:545919-546085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544571-544652:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543817-543949:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:543387-543478:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:542057-542313:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:541222-541620:-1:exon

kctd7
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: kctd7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(561195..566949)
location: region:561195-566949:-1
so has part: feature:561195-566949:-1:exon
subclass of: SO_0000010

102687388
type: Gene
SIO_000068: ncbigene

position:561195:-1
position: 561195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566949:-1
position: 566949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561195-566949:-1:exon

kctd7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: kctd7
product: potassium channel tetramerization domain containing 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015367567.1
SIO_010081: kctd7
subclass of: SO_0000673
so part of: kctd7
location: complement(join(561195..562612,563217..563369,564193..564362,565899..566949))
location: region:561195-566949:-1
so has part: feature:565899-566949:-1:exon
so has part: feature:564193-564362:-1:exon
so has part: feature:563217-563369:-1:exon
so has part: feature:561195-562612:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565899-566949:-1:exon

position:565899:-1
position: 565899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564193-564362:-1:exon

position:564193:-1
position: 564193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564362:-1
position: 564362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:563217-563369:-1:exon

position:563217:-1
position: 563217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563369:-1
position: 563369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:561195-562612:-1:exon

position:562612:-1
position: 562612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

kctd7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: kctd7
product: potassium channel tetramerization domain containing 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_006640805.2
SIO_010081: kctd7
subclass of: SO_0000673
so part of: kctd7
location: complement(join(561195..562612,563217..563395,564193..564362,565899..566949))
location: region:561195-566949:-1
so has part: feature:565899-566949:-1:exon
so has part: feature:564193-564362:-1:exon
so has part: feature:563217-563395:-1:exon
so has part: feature:561195-562612:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565899-566949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564193-564362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563217-563395:-1:exon

position:563395:-1
position: 563395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:561195-562612:-1:exon

kctd7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: kctd7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD7 isoform X1
translation: MSGLFSQSAHPNGESLCSLPADSGSSQAECMQQHGGGGGEAESRARPLPAAPAPAPAPAAARLRRFAAEKRALPQPRVMVVLAGRDETDEPADAMSSSDSADEDFRKPASPMPSRYLGKPLCTYSGLQEFPEVVPLNVGGTYFTTRLSTLRRYDDTMLAAMFSGRHHIPRDAEGRFFIDRDGAYFGRAAPAGPREVCAQRGTVLLHRALAGEPGAGPAPDRGDGSAGLPRPAALLQGEPGAHRGDRQAAGHAAEGALRQAEDLRVQGGDARHALRAAALQLAALRAERERGQAVRAPLRGGRVLRALGGRGRRVRPSALHRERPGAARHHGRAPVHRRVRQAPHQPLLLQEAHLRVQDHLVVKPARLSSPGSRPTVGGQA
SIO_010081: kctd7
subclass of: SO_0000673
so part of: kctd7
location: complement(join(562180..562612,563217..563369,564193..564362,565899..566285))
location: region:562180-566285:-1
so has part: feature:565899-566285:-1:exon
so has part: feature:564193-564362:-1:exon
so has part: feature:563217-563369:-1:exon
so has part: feature:562180-562612:-1:exon

XP_015223053.1
type: Protein
SIO_000068: ncbiprotein

position:562180:-1
position: 562180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566285:-1
position: 566285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565899-566285:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564193-564362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563217-563369:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562180-562612:-1:exon

kctd7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: kctd7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD7 isoform X2
translation: MSGLFSQSAHPNGESLCSLPADSGSSQAECMQQHGGGGGEAESRARPLPAAPAPAPAPAAARLRRFAAEKRALPQPRVMVVLAGRDETDEPADAMSSSDSADEDFRKPASPMPSRYLGKPLCTYSGLQEFPEVVPLNVGGTYFTTRLSTLRRYDDTMLAAMFSGRHHIPRDAEGRFFIDRDGAYFGDILNFLRAGELPQRDRVRSVHREAQYYSIGPLLESLEQVQPLTGETVRQAFLDLLPYYKENLERIVEIAKLRAMQRKARFAKLKICVYKEEMPVTPYERPLFNSLRFERSESEAKLFEHHCEVDVSFGPWEAVADVYDLLHCIVSDLAQRGITAEHQCIGVCDKHLINHYYCKRPIYEFKITWW
SIO_010081: kctd7
subclass of: SO_0000673
so part of: kctd7
location: complement(join(562236..562612,563217..563395,564193..564362,565899..566285))
location: region:562236-566285:-1
so has part: feature:565899-566285:-1:exon
so has part: feature:564193-564362:-1:exon
so has part: feature:563217-563395:-1:exon
so has part: feature:562236-562612:-1:exon

XP_006640868.2
type: Protein
SIO_000068: ncbiprotein

position:562236:-1
position: 562236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565899-566285:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564193-564362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563217-563395:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562236-562612:-1:exon

LOC102696802
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102696802
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(567033..570143)
location: region:567033-570143:-1
so has part: feature:567033-570143:-1:exon
subclass of: SO_0000010

102696802
type: Gene
SIO_000068: ncbigene

position:567033:-1
position: 567033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570143:-1
position: 570143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567033-570143:-1:exon

LOC102696802
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102696802
product: caspase-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015367571.1
SIO_010081: LOC102696802
subclass of: SO_0000673
so part of: LOC102696802
location: complement(join(567033..567247,567901..568170,569959..570143))
location: region:567033-570143:-1
so has part: feature:569959-570143:-1:exon
so has part: feature:567901-568170:-1:exon
so has part: feature:567033-567247:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:569959-570143:-1:exon

position:569959:-1
position: 569959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:567901-568170:-1:exon

position:567901:-1
position: 567901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568170:-1
position: 568170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:567033-567247:-1:exon

position:567247:-1
position: 567247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102696802
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102696802
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase-1-like
translation: MADQMVKAARVQLIQRLNQAVVKDLLDLLQEEEVLNTGEVEEVLEGNSTTKEKSRCLLDMLIKKGPRACHTFLSFLHGLDQELCTSLEL
SIO_010081: LOC102696802
subclass of: SO_0000673
so part of: LOC102696802
location: complement(join(567908..568170,569959..569965))
location: region:567908-569965:-1
so has part: feature:569959-569965:-1:exon
so has part: feature:567908-568170:-1:exon

XP_015223057.1
type: Protein
SIO_000068: ncbiprotein

position:567908:-1
position: 567908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569965:-1
position: 569965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569959-569965:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:567908-568170:-1:exon

casp1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: casp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 570469..576868
location: region:570469-576868:1
so has part: feature:570469-576868:1:exon
subclass of: SO_0000010

102696999
type: Gene
SIO_000068: ncbigene

position:570469:1
position: 570469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576868:1
position: 576868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570469-576868:1:exon

casp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: casp1
product: caspase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015367568.1
SIO_010081: casp1
subclass of: SO_0000673
so part of: casp1
location: join(570469..570828,572081..572362,572807..572910,573322..573498,573973..574210,575151..575273,575836..575945,576237..576868)
location: region:570469-576868:1
so has part: feature:570469-570828:1:exon
so has part: feature:572081-572362:1:exon
so has part: feature:572807-572910:1:exon
so has part: feature:573322-573498:1:exon
so has part: feature:573973-574210:1:exon
so has part: feature:575151-575273:1:exon
so has part: feature:575836-575945:1:exon
so has part: feature:576237-576868:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:570469-570828:1:exon

position:570828:1
position: 570828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:572081-572362:1:exon

position:572081:1
position: 572081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572362:1
position: 572362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:572807-572910:1:exon

position:572807:1
position: 572807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572910:1
position: 572910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:573322-573498:1:exon

position:573322:1
position: 573322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573498:1
position: 573498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:573973-574210:1:exon

position:573973:1
position: 573973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574210:1
position: 574210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:575151-575273:1:exon

position:575151:1
position: 575151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575273:1
position: 575273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:575836-575945:1:exon

position:575836:1
position: 575836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575945:1
position: 575945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:576237-576868:1:exon

position:576237:1
position: 576237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

casp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: casp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase-1
translation: MADKKLLSVRTRLVDGLNHAVIRDLLDDLNSDGVLNDGEVEEVTEGQSRTRDKARCLVDMVRKKGSRASEKLLSRLQERDGSLHGQLELDAQPAQGAPVPIISQQETHPPGVLVPCTQQFYSRIFAEEADSVYPIKEKSGRKRLALIINNILFDRPDMERKGASKDEENMEKLLKDLGYTPETSNNLSAEDMEKTLRAFAKREEHKESDSTFVVIMSHGVRDGICGVHYQNEESKDVFPNDKIFEILNTQNCPGLRNKPKVILIQACRGEGGGYAFVSDSVPVDPMEYEDDALRKEHKEKDFICLCSSTPDNKSYRHCVLGTIFFQRIVEQFHANAHKDHIDELFRKVQNAFKDFPMQMPSKERTTLLKKFYLFPGL
SIO_010081: casp1
subclass of: SO_0000673
so part of: casp1
location: join(570822..570828,572081..572362,572807..572910,573322..573498,573973..574210,575151..575273,575836..575945,576237..576329)
location: region:570822-576329:1
so has part: feature:570822-570828:1:exon
so has part: feature:572081-572362:1:exon
so has part: feature:572807-572910:1:exon
so has part: feature:573322-573498:1:exon
so has part: feature:573973-574210:1:exon
so has part: feature:575151-575273:1:exon
so has part: feature:575836-575945:1:exon
so has part: feature:576237-576329:1:exon

XP_015223054.1
type: Protein
SIO_000068: ncbiprotein

position:570822:1
position: 570822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576329:1
position: 576329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570822-570828:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:572081-572362:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:572807-572910:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573322-573498:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573973-574210:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575151-575273:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575836-575945:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576237-576329:1:exon

LOC102697190
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102697190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(577482..598070)
location: region:577482-598070:-1
so has part: feature:577482-598070:-1:exon
subclass of: SO_0000010

102697190
type: Gene
SIO_000068: ncbigene

position:577482:-1
position: 577482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598070:-1
position: 598070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577482-598070:-1:exon

LOC102697190
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102697190
product: syntaxin-1B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015367570.1
SIO_010081: LOC102697190
subclass of: SO_0000673
so part of: LOC102697190
location: complement(join(577482..585222,594858..594968,597938..598070))
location: region:577482-598070:-1
so has part: feature:597938-598070:-1:exon
so has part: feature:594858-594968:-1:exon
so has part: feature:577482-585222:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:597938-598070:-1:exon

position:597938:-1
position: 597938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:594858-594968:-1:exon

position:594858:-1
position: 594858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594968:-1
position: 594968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:577482-585222:-1:exon

position:585222:-1
position: 585222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102697190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102697190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-1B-like
translation: MDSNITKQAMNEIETRHNEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHSVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGIVIASSLAGTLG
SIO_010081: LOC102697190
subclass of: SO_0000673
so part of: LOC102697190
location: complement(join(585145..585222,594858..594968,597938..598069))
location: region:585145-598069:-1
so has part: feature:597938-598069:-1:exon
so has part: feature:594858-594968:-1:exon
so has part: feature:585145-585222:-1:exon

XP_015223056.1
type: Protein
SIO_000068: ncbiprotein

position:585145:-1
position: 585145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598069:-1
position: 598069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597938-598069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594858-594968:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:585145-585222:-1:exon

wbscr22
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: wbscr22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(682162..690252)
location: region:682162-690252:-1
so has part: feature:682162-690252:-1:exon
subclass of: SO_0000010

102687594
type: Gene
SIO_000068: ncbigene

position:682162:-1
position: 682162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690252:-1
position: 690252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:682162-690252:-1:exon

wbscr22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: wbscr22
product: Williams Beuren syndrome chromosome region 22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006640806.2
SIO_010081: wbscr22
subclass of: SO_0000673
so part of: wbscr22
location: complement(join(682162..682550,683233..683322,684419..684480,684649..684694,685261..685346,685913..685963,686402..686498,686584..686680,687566..687648,688271..688366,688949..688986,689886..690252))
location: region:682162-690252:-1
so has part: feature:689886-690252:-1:exon
so has part: feature:688949-688986:-1:exon
so has part: feature:688271-688366:-1:exon
so has part: feature:687566-687648:-1:exon
so has part: feature:686584-686680:-1:exon
so has part: feature:686402-686498:-1:exon
so has part: feature:685913-685963:-1:exon
so has part: feature:685261-685346:-1:exon
so has part: feature:684649-684694:-1:exon
so has part: feature:684419-684480:-1:exon
so has part: feature:683233-683322:-1:exon
so has part: feature:682162-682550:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:689886-690252:-1:exon

position:689886:-1
position: 689886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:688949-688986:-1:exon

position:688949:-1
position: 688949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688986:-1
position: 688986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:688271-688366:-1:exon

position:688271:-1
position: 688271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688366:-1
position: 688366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:687566-687648:-1:exon

position:687566:-1
position: 687566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687648:-1
position: 687648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:686584-686680:-1:exon

position:686584:-1
position: 686584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686680:-1
position: 686680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:686402-686498:-1:exon

position:686402:-1
position: 686402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686498:-1
position: 686498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:685913-685963:-1:exon

position:685913:-1
position: 685913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685963:-1
position: 685963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:685261-685346:-1:exon

position:685261:-1
position: 685261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685346:-1
position: 685346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:684649-684694:-1:exon

position:684649:-1
position: 684649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684694:-1
position: 684694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:684419-684480:-1:exon

position:684419:-1
position: 684419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684480:-1
position: 684480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:683233-683322:-1:exon

position:683233:-1
position: 683233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683322:-1
position: 683322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:682162-682550:-1:exon

position:682550:-1
position: 682550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

wbscr22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: wbscr22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable 18S rRNA (guanine-N(7))-methyltransferase
translation: MSSSCRRPEHMAPPEVFYNEEEARKYSQNSRMIEIQTQMSERAVELLNLPEDQPCYLLDVGCGSGLSGDYLSEQGHYWVGVDISTAMLDVALDREVEGDLLLGDMGQGLPFRPGAFDGCISISALQWLCNADKKTHSPPRRLYRFFSTLYGALARGSRAVFQIYPENSEQLELITSQAMKAGFTGGMVVDYPNSTKAKKFFLCLFAGVSGVLPKGLGTETVDRGVSNQAVFTGQRSRFKQMKGKSVKKSKDWILEKKERRRRQGREVRADTKYTGRQRKPRF
SIO_010081: wbscr22
subclass of: SO_0000673
so part of: wbscr22
location: complement(join(682496..682550,683233..683322,684419..684480,684649..684694,685261..685346,685913..685963,686402..686498,686584..686680,687566..687648,688271..688366,688949..688986,689886..689933))
location: region:682496-689933:-1
so has part: feature:689886-689933:-1:exon
so has part: feature:688949-688986:-1:exon
so has part: feature:688271-688366:-1:exon
so has part: feature:687566-687648:-1:exon
so has part: feature:686584-686680:-1:exon
so has part: feature:686402-686498:-1:exon
so has part: feature:685913-685963:-1:exon
so has part: feature:685261-685346:-1:exon
so has part: feature:684649-684694:-1:exon
so has part: feature:684419-684480:-1:exon
so has part: feature:683233-683322:-1:exon
so has part: feature:682496-682550:-1:exon

XP_006640869.1
type: Protein
SIO_000068: ncbiprotein

position:682496:-1
position: 682496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689933:-1
position: 689933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689886-689933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688949-688986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:688271-688366:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:687566-687648:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:686584-686680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:686402-686498:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:685913-685963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:685261-685346:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:684649-684694:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:684419-684480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:683233-683322:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:682496-682550:-1:exon

LOC107079949
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 691809..694072
location: region:691809-694072:1
so has part: feature:691809-694072:1:exon
subclass of: SO_0000011

107079949
type: Gene
SIO_000068: ncbigene

position:691809:1
position: 691809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694072:1
position: 694072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:691809-694072:1:exon

LOC107079949
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107079949
product: uncharacterized LOC107079949
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001480846.1
SIO_010081: LOC107079949
subclass of: SO_0000673
so part of: LOC107079949
location: join(691809..691897,693370..693600,693716..694072)
location: region:691809-694072:1
so has part: feature:691809-691897:1:exon
so has part: feature:693370-693600:1:exon
so has part: feature:693716-694072:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:691809-691897:1:exon

position:691897:1
position: 691897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:693370-693600:1:exon

position:693370:1
position: 693370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693600:1
position: 693600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:693716-694072:1:exon

position:693716:1
position: 693716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sh2b2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: sh2b2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(699187..726909)
location: region:699187-726909:-1
so has part: feature:699187-726909:-1:exon
subclass of: SO_0000010

102687796
type: Gene
SIO_000068: ncbigene

position:699187:-1
position: 699187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726909:-1
position: 726909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699187-726909:-1:exon

sh2b2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: sh2b2
product: SH2B adaptor protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015367740.1
SIO_010081: sh2b2
subclass of: SO_0000673
so part of: sh2b2
location: complement(join(699187..699887,703644..703815,704201..704406,705235..705390,706078..706178,706622..706713,708383..708484,709553..710390,724647..724740,726840..726909))
location: region:699187-726909:-1
so has part: feature:726840-726909:-1:exon
so has part: feature:724647-724740:-1:exon
so has part: feature:709553-710390:-1:exon
so has part: feature:708383-708484:-1:exon
so has part: feature:706622-706713:-1:exon
so has part: feature:706078-706178:-1:exon
so has part: feature:705235-705390:-1:exon
so has part: feature:704201-704406:-1:exon
so has part: feature:703644-703815:-1:exon
so has part: feature:699187-699887:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:726840-726909:-1:exon

position:726840:-1
position: 726840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:724647-724740:-1:exon

position:724647:-1
position: 724647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724740:-1
position: 724740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:709553-710390:-1:exon

position:709553:-1
position: 709553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710390:-1
position: 710390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:708383-708484:-1:exon

position:708383:-1
position: 708383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708484:-1
position: 708484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:706622-706713:-1:exon

position:706622:-1
position: 706622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706713:-1
position: 706713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:706078-706178:-1:exon

position:706078:-1
position: 706078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706178:-1
position: 706178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:705235-705390:-1:exon

position:705235:-1
position: 705235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705390:-1
position: 705390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:704201-704406:-1:exon

position:704201:-1
position: 704201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704406:-1
position: 704406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:703644-703815:-1:exon

position:703644:-1
position: 703644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703815:-1
position: 703815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:699187-699887:-1:exon

position:699887:-1
position: 699887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sh2b2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: sh2b2
product: SH2B adaptor protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015367739.1
SIO_010081: sh2b2
subclass of: SO_0000673
so part of: sh2b2
location: complement(join(699187..699887,703644..703815,704201..704406,705235..705390,706078..706178,706622..706713,708383..708484,709553..710390,723284..723708))
location: region:699187-723708:-1
so has part: feature:723284-723708:-1:exon
so has part: feature:709553-710390:-1:exon
so has part: feature:708383-708484:-1:exon
so has part: feature:706622-706713:-1:exon
so has part: feature:706078-706178:-1:exon
so has part: feature:705235-705390:-1:exon
so has part: feature:704201-704406:-1:exon
so has part: feature:703644-703815:-1:exon
so has part: feature:699187-699887:-1:exon

position:723708:-1
position: 723708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723284-723708:-1:exon

position:723284:-1
position: 723284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:709553-710390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708383-708484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706622-706713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706078-706178:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:705235-705390:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:704201-704406:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703644-703815:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:699187-699887:-1:exon

sh2b2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: sh2b2
product: SH2B adaptor protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015367738.1
SIO_010081: sh2b2
subclass of: SO_0000673
so part of: sh2b2
location: complement(join(699187..699887,703644..703815,704201..704406,705235..705390,706078..706178,706622..706713,708383..708484,709553..710390,722077..722290))
location: region:699187-722290:-1
so has part: feature:722077-722290:-1:exon
so has part: feature:709553-710390:-1:exon
so has part: feature:708383-708484:-1:exon
so has part: feature:706622-706713:-1:exon
so has part: feature:706078-706178:-1:exon
so has part: feature:705235-705390:-1:exon
so has part: feature:704201-704406:-1:exon
so has part: feature:703644-703815:-1:exon
so has part: feature:699187-699887:-1:exon

position:722290:-1
position: 722290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722077-722290:-1:exon

position:722077:-1
position: 722077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:709553-710390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708383-708484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706622-706713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706078-706178:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:705235-705390:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:704201-704406:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703644-703815:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:699187-699887:-1:exon

sh2b2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: sh2b2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2B adapter protein 2 isoform X1
translation: MCLVVRLRTCCVRGAPAPVRGHHYLFTCHPPQRWNGAAMNGDAPPSPEPPCPLPDWKEFCELHARASASDFADKFRRFVRENPSYDSPGADATFSQHFARHFLDCFAAELSRAHTPGSPGTAKYSIVPFVGLQSCPLPYGRDLYLRRKEEAGASSESLDSMDSGPGNPPPQASRAPLGQSRSSEDVSAGHPKARFKKGFSLRNMSLCVVDGVKEIWHRRASPEPQPGRRASGEAGDKRGQRLRFSRPSQGPRAELLEIQREGALRYMVADDTSCVGASQWQKCRLLLRKSARTEGERFLLEFYVPPKSSKPKVSIPLSAIVEVRTTMPLEMPDKDNTFVLKVENGAEYILETIDSLQKHSWVADIQDCIDPGDSGDDIELASCLHGPAGKDFPMVASCSCELLSEGVHRAPDRSCVMAHEHHGAPSVRCRESLFAEHPMHAPLEPFLQSLETPGATTGCPVGESGDAEGEASLAGYPWFHGTLSRVRAAQLVLSGGARSHGLFVIRQSETRPGEYVLTFNFQGKAKHLRLSVNDNGQCHVHHLWFQTVCDMLRHFHTHPIPLESGGSADITLRCYVQALRPTPEPAVSQLPPPAREPGGCRPDLHPSPHYFSGAPQPGLPSADGPPSSSSSSPWGEAAGGGGGAGGGLRSRSNSSERLLEPPAGSAEDYHESDGARRARAVENQYSFY
SIO_010081: sh2b2
subclass of: SO_0000673
so part of: sh2b2
location: complement(join(699571..699887,703644..703815,704201..704406,705235..705390,706078..706178,706622..706713,708383..708484,709553..710390,722077..722159))
location: region:699571-722159:-1
so has part: feature:722077-722159:-1:exon
so has part: feature:709553-710390:-1:exon
so has part: feature:708383-708484:-1:exon
so has part: feature:706622-706713:-1:exon
so has part: feature:706078-706178:-1:exon
so has part: feature:705235-705390:-1:exon
so has part: feature:704201-704406:-1:exon
so has part: feature:703644-703815:-1:exon
so has part: feature:699571-699887:-1:exon

XP_015223224.1
type: Protein
SIO_000068: ncbiprotein

position:699571:-1
position: 699571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722159:-1
position: 722159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722077-722159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:709553-710390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708383-708484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706622-706713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706078-706178:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:705235-705390:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:704201-704406:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703644-703815:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:699571-699887:-1:exon

sh2b2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: sh2b2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2B adapter protein 2 isoform X2
translation: MNGDAPPSPEPPCPLPDWKEFCELHARASASDFADKFRRFVRENPSYDSPGADATFSQHFARHFLDCFAAELSRAHTPGSPGTAKYSIVPFVGLQSCPLPYGRDLYLRRKEEAGASSESLDSMDSGPGNPPPQASRAPLGQSRSSEDVSAGHPKARFKKGFSLRNMSLCVVDGVKEIWHRRASPEPQPGRRASGEAGDKRGQRLRFSRPSQGPRAELLEIQREGALRYMVADDTSCVGASQWQKCRLLLRKSARTEGERFLLEFYVPPKSSKPKVSIPLSAIVEVRTTMPLEMPDKDNTFVLKVENGAEYILETIDSLQKHSWVADIQDCIDPGDSGDDIELASCLHGPAGKDFPMVASCSCELLSEGVHRAPDRSCVMAHEHHGAPSVRCRESLFAEHPMHAPLEPFLQSLETPGATTGCPVGESGDAEGEASLAGYPWFHGTLSRVRAAQLVLSGGARSHGLFVIRQSETRPGEYVLTFNFQGKAKHLRLSVNDNGQCHVHHLWFQTVCDMLRHFHTHPIPLESGGSADITLRCYVQALRPTPEPAVSQLPPPAREPGGCRPDLHPSPHYFSGAPQPGLPSADGPPSSSSSSPWGEAAGGGGGAGGGLRSRSNSSERLLEPPAGSAEDYHESDGARRARAVENQYSFY
SIO_010081: sh2b2
subclass of: SO_0000673
so part of: sh2b2
location: complement(join(699571..699887,703644..703815,704201..704406,705235..705390,706078..706178,706622..706713,708383..708484,709553..710359))
location: region:699571-710359:-1
so has part: feature:709553-710359:-1:exon
so has part: feature:708383-708484:-1:exon
so has part: feature:706622-706713:-1:exon
so has part: feature:706078-706178:-1:exon
so has part: feature:705235-705390:-1:exon
so has part: feature:704201-704406:-1:exon
so has part: feature:703644-703815:-1:exon
so has part: feature:699571-699887:-1:exon

XP_015223225.1
type: Protein
SIO_000068: ncbiprotein

position:710359:-1
position: 710359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709553-710359:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:708383-708484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:706622-706713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706078-706178:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:705235-705390:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704201-704406:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703644-703815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:699571-699887:-1:exon

sh2b2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: sh2b2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2B adapter protein 2 isoform X2
translation: MNGDAPPSPEPPCPLPDWKEFCELHARASASDFADKFRRFVRENPSYDSPGADATFSQHFARHFLDCFAAELSRAHTPGSPGTAKYSIVPFVGLQSCPLPYGRDLYLRRKEEAGASSESLDSMDSGPGNPPPQASRAPLGQSRSSEDVSAGHPKARFKKGFSLRNMSLCVVDGVKEIWHRRASPEPQPGRRASGEAGDKRGQRLRFSRPSQGPRAELLEIQREGALRYMVADDTSCVGASQWQKCRLLLRKSARTEGERFLLEFYVPPKSSKPKVSIPLSAIVEVRTTMPLEMPDKDNTFVLKVENGAEYILETIDSLQKHSWVADIQDCIDPGDSGDDIELASCLHGPAGKDFPMVASCSCELLSEGVHRAPDRSCVMAHEHHGAPSVRCRESLFAEHPMHAPLEPFLQSLETPGATTGCPVGESGDAEGEASLAGYPWFHGTLSRVRAAQLVLSGGARSHGLFVIRQSETRPGEYVLTFNFQGKAKHLRLSVNDNGQCHVHHLWFQTVCDMLRHFHTHPIPLESGGSADITLRCYVQALRPTPEPAVSQLPPPAREPGGCRPDLHPSPHYFSGAPQPGLPSADGPPSSSSSSPWGEAAGGGGGAGGGLRSRSNSSERLLEPPAGSAEDYHESDGARRARAVENQYSFY
SIO_010081: sh2b2
subclass of: SO_0000673
so part of: sh2b2
location: complement(join(699571..699887,703644..703815,704201..704406,705235..705390,706078..706178,706622..706713,708383..708484,709553..710359))
location: region:699571-710359:-1
so has part: feature:709553-710359:-1:exon
so has part: feature:708383-708484:-1:exon
so has part: feature:706622-706713:-1:exon
so has part: feature:706078-706178:-1:exon
so has part: feature:705235-705390:-1:exon
so has part: feature:704201-704406:-1:exon
so has part: feature:703644-703815:-1:exon
so has part: feature:699571-699887:-1:exon

XP_015223226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:709553-710359:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:708383-708484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:706622-706713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706078-706178:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:705235-705390:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704201-704406:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703644-703815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:699571-699887:-1:exon

cux1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: cux1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(738429..899161)
location: region:738429-899161:-1
so has part: feature:738429-899161:-1:exon
subclass of: SO_0000010

102697391
type: Gene
SIO_000068: ncbigene

position:738429:-1
position: 738429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899161:-1
position: 899161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738429-899161:-1:exon

cux1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cux1
product: cut-like homeobox 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015367614.1
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(738429..738497,739238..739318,739729..739785,739921..740004,740162..740278,740577..740689,742494..742560,743666..743802,792382..792478,793092..793140,795166..795224,795738..795926,796332..796436,799825..799873,821150..821216,822614..822690,826625..826748,828556..828693,835204..835282,847356..847403,874095..874497))
location: region:738429-874497:-1
so has part: feature:874095-874497:-1:exon
so has part: feature:847356-847403:-1:exon
so has part: feature:835204-835282:-1:exon
so has part: feature:828556-828693:-1:exon
so has part: feature:826625-826748:-1:exon
so has part: feature:822614-822690:-1:exon
so has part: feature:821150-821216:-1:exon
so has part: feature:799825-799873:-1:exon
so has part: feature:796332-796436:-1:exon
so has part: feature:795738-795926:-1:exon
so has part: feature:795166-795224:-1:exon
so has part: feature:793092-793140:-1:exon
so has part: feature:792382-792478:-1:exon
so has part: feature:743666-743802:-1:exon
so has part: feature:742494-742560:-1:exon
so has part: feature:740577-740689:-1:exon
so has part: feature:740162-740278:-1:exon
so has part: feature:739921-740004:-1:exon
so has part: feature:739729-739785:-1:exon
so has part: feature:739238-739318:-1:exon
so has part: feature:738429-738497:-1:exon

position:874497:-1
position: 874497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874095-874497:-1:exon

position:874095:-1
position: 874095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:847356-847403:-1:exon

position:847356:-1
position: 847356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847403:-1
position: 847403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:835204-835282:-1:exon

position:835204:-1
position: 835204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835282:-1
position: 835282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:828556-828693:-1:exon

position:828556:-1
position: 828556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828693:-1
position: 828693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:826625-826748:-1:exon

position:826625:-1
position: 826625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826748:-1
position: 826748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:822614-822690:-1:exon

position:822614:-1
position: 822614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822690:-1
position: 822690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:821150-821216:-1:exon

position:821150:-1
position: 821150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821216:-1
position: 821216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:799825-799873:-1:exon

position:799825:-1
position: 799825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799873:-1
position: 799873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:796332-796436:-1:exon

position:796332:-1
position: 796332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796436:-1
position: 796436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:795738-795926:-1:exon

position:795738:-1
position: 795738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795926:-1
position: 795926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:795166-795224:-1:exon

position:795166:-1
position: 795166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795224:-1
position: 795224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:793092-793140:-1:exon

position:793092:-1
position: 793092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793140:-1
position: 793140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:792382-792478:-1:exon

position:792382:-1
position: 792382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792478:-1
position: 792478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:743666-743802:-1:exon

position:743666:-1
position: 743666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743802:-1
position: 743802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:742494-742560:-1:exon

position:742494:-1
position: 742494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742560:-1
position: 742560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:740577-740689:-1:exon

position:740577:-1
position: 740577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740689:-1
position: 740689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:740162-740278:-1:exon

position:740162:-1
position: 740162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740278:-1
position: 740278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:739921-740004:-1:exon

position:739921:-1
position: 739921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740004:-1
position: 740004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:739729-739785:-1:exon

position:739729:-1
position: 739729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739785:-1
position: 739785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:739238-739318:-1:exon

position:739238:-1
position: 739238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739318:-1
position: 739318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:738429-738497:-1:exon

position:738497:-1
position: 738497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cux1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cux1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CASP isoform X7
translation: MCRAPSPSVSLFLWRCGSAAAALSTEPRSRQGFTLVSRGQGGGPPPSHVQLQACLVLPSQRELDATATVLANRQDESEQSRKKLIDQSREFKKNTPEDLRKQVAPLLKSFQAEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALELGQQLQLKVQRMHDVETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTVKNQAENLALEKEQQLHNDYAEKERKLQESQESLASKLEEADHKAQSLQTALETTQAELFDLKTKYDEESTAKADEIEMVMTDLERANQRAEAAEREAEALREQLTSANKSLQLATQIQKAPDVEQALEVLSRSSLEVELSAKEREIVQLVEDVQRLQASLSKLRENSASQISQLEQQLSSKNSTLKQLEEKLQEQADYEEVKKELNILKSMEFGPSEGSTAQDSSKPLEVLLLEKNRALQSESAGLRIANSELSGRYAELQLEFSEAVHTSTEQKELILKLERDLSTVQSMSTLQRPDAEGADFSHLERIPEPIKEATALFSGVGVLPQAELPQGQMDSLLSIISSQRERFRTRNQELETESRTLQQTLHALQTELDSLRADNIKLYEKIRFLQSYPGRAGASDDTVMRYSSQYEERLDPFSSFSKRERQRRYLSLSPWDKATLGLGRAILSSKTARTIAFFYTVFLHCLVFLVLYKTAWSESIGRDCSAYCAKK
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(738429..738497,739238..739318,739729..739785,739921..740004,740162..740278,740577..740689,742494..742560,743666..743802,792382..792478,793092..793140,795166..795224,795738..795926,796332..796436,799825..799873,821150..821216,822614..822690,826625..826748,828556..828693,835204..835282,847356..847403,874095..874385))
location: region:738429-874385:-1
so has part: feature:874095-874385:-1:exon
so has part: feature:847356-847403:-1:exon
so has part: feature:835204-835282:-1:exon
so has part: feature:828556-828693:-1:exon
so has part: feature:826625-826748:-1:exon
so has part: feature:822614-822690:-1:exon
so has part: feature:821150-821216:-1:exon
so has part: feature:799825-799873:-1:exon
so has part: feature:796332-796436:-1:exon
so has part: feature:795738-795926:-1:exon
so has part: feature:795166-795224:-1:exon
so has part: feature:793092-793140:-1:exon
so has part: feature:792382-792478:-1:exon
so has part: feature:743666-743802:-1:exon
so has part: feature:742494-742560:-1:exon
so has part: feature:740577-740689:-1:exon
so has part: feature:740162-740278:-1:exon
so has part: feature:739921-740004:-1:exon
so has part: feature:739729-739785:-1:exon
so has part: feature:739238-739318:-1:exon
so has part: feature:738429-738497:-1:exon

XP_015223100.1
type: Protein
SIO_000068: ncbiprotein

position:874385:-1
position: 874385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874095-874385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:847356-847403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835204-835282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828556-828693:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826625-826748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:822614-822690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821150-821216:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799825-799873:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:796332-796436:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:795738-795926:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:795166-795224:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:793092-793140:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:792382-792478:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:743666-743802:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:742494-742560:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:740577-740689:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:740162-740278:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:739921-740004:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:739729-739785:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:739238-739318:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:738429-738497:-1:exon

cux1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cux1
product: cut-like homeobox 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015367610.1
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(743811..758614,758774..759041,763541..763729,767502..767771,777035..777194,778436..778762,780393..780892,782178..782279,785493..785573,787912..788667,792382..792478,793092..793140,795166..795224,795738..795926,796332..796436,799825..799873,821150..821216,822614..822690,826625..826748,828556..828693,835204..835282,847356..847403,874095..874205,899141..899161))
location: region:743811-899161:-1
so has part: feature:899141-899161:-1:exon
so has part: feature:874095-874205:-1:exon
so has part: feature:847356-847403:-1:exon
so has part: feature:835204-835282:-1:exon
so has part: feature:828556-828693:-1:exon
so has part: feature:826625-826748:-1:exon
so has part: feature:822614-822690:-1:exon
so has part: feature:821150-821216:-1:exon
so has part: feature:799825-799873:-1:exon
so has part: feature:796332-796436:-1:exon
so has part: feature:795738-795926:-1:exon
so has part: feature:795166-795224:-1:exon
so has part: feature:793092-793140:-1:exon
so has part: feature:792382-792478:-1:exon
so has part: feature:787912-788667:-1:exon
so has part: feature:785493-785573:-1:exon
so has part: feature:782178-782279:-1:exon
so has part: feature:780393-780892:-1:exon
so has part: feature:778436-778762:-1:exon
so has part: feature:777035-777194:-1:exon
so has part: feature:767502-767771:-1:exon
so has part: feature:763541-763729:-1:exon
so has part: feature:758774-759041:-1:exon
so has part: feature:743811-758614:-1:exon

position:743811:-1
position: 743811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:899141-899161:-1:exon

position:899141:-1
position: 899141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:874095-874205:-1:exon

position:874205:-1
position: 874205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:847356-847403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:835204-835282:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:828556-828693:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:826625-826748:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:822614-822690:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821150-821216:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:799825-799873:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:796332-796436:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:795738-795926:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:795166-795224:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:793092-793140:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:792382-792478:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:787912-788667:-1:exon

position:787912:-1
position: 787912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788667:-1
position: 788667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:785493-785573:-1:exon

position:785493:-1
position: 785493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785573:-1
position: 785573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:782178-782279:-1:exon

position:782178:-1
position: 782178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782279:-1
position: 782279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:780393-780892:-1:exon

position:780393:-1
position: 780393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780892:-1
position: 780892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:778436-778762:-1:exon

position:778436:-1
position: 778436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778762:-1
position: 778762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:777035-777194:-1:exon

position:777035:-1
position: 777035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777194:-1
position: 777194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:767502-767771:-1:exon

position:767502:-1
position: 767502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767771:-1
position: 767771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:763541-763729:-1:exon

position:763541:-1
position: 763541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763729:-1
position: 763729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:758774-759041:-1:exon

position:758774:-1
position: 758774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759041:-1
position: 759041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:743811-758614:-1:exon

position:758614:-1
position: 758614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cux1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cux1
product: cut-like homeobox 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015367611.1
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(743811..758614,758774..759041,763541..763729,767502..767771,777035..777194,778436..778762,780393..780892,782178..782279,787912..788667,792382..792478,793092..793140,795166..795224,795738..795926,796332..796436,799825..799873,821150..821216,822614..822690,826625..826748,828556..828693,835204..835282,847356..847403,874095..874537))
location: region:743811-874537:-1
so has part: feature:874095-874537:-1:exon
so has part: feature:847356-847403:-1:exon
so has part: feature:835204-835282:-1:exon
so has part: feature:828556-828693:-1:exon
so has part: feature:826625-826748:-1:exon
so has part: feature:822614-822690:-1:exon
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cux1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cux1
product: cut-like homeobox 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_015367609.1
SIO_010081: cux1
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cux1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cux1
product: cut-like homeobox 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015367612.1
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
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location: region:743811-874537:-1
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cux1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cux1
product: cut-like homeobox 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015367608.1
SIO_010081: cux1
subclass of: SO_0000673
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location: region:743811-874537:-1
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cux1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cux1
product: cut-like homeobox 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015367613.1
SIO_010081: cux1
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cux1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cux1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CASP isoform X3
translation: MERELDATATVLANRQDESEQSRKKLIDQSREFKKNTPEDLRKQVAPLLKSFQAEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALELGQQLQLKVQRMHDVETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTVKNQAENLALEKEQQLHNDYAEKERKLQESQESLASKLEEADHKAQSLQTALETTQAELFDLKTKYDEESTAKADEIEMVMTDLERANQRAEAAEREAEALREQLTSANKSLQLATQIQKAPDVEQALEVLSRSSLEVELSAKEREIVQLVEDVQRLQASLSKLRENSASQISQLEQQLSSKNSTLKQLEEKLQEQADYEEVKKELNILKSMEFGPSEGSTAQDSSKPLEVLLLEKNRALQSESAGLRIANSELSGAAGRKGKEAQAESQQRVPATANTAATRQGSPPPPAPSQLLLRAGTSTNSSGAAEPASSANGTHQFSPSGLAQDFFSPSLAGPGSAFPLAGKVALNSLLQRQLMQTFYSKALQDSPSGTMLFAPGPYAATSLSASPLQQSQHQPAGSPDVNGMAPSPSQSEGAGSTSEGEDMDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTIRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRVFQEVPKRRTGSEGSSRPGNITTRIRTPESGSDEAIKSILEQAKRELQVQKAAEPPPPQNSSGVPGGSGSSSDEAIRSILEQARREMEAQQVALEPVLKASSLSQSELSLLSPKLLASHSLTAIQGFSPLALSLKKPPVSASSALLDFHSSAMKKESGESPIPEVQGAADGGSKPGRTAEGARGGVPWREQWWNTVHSERRGAPTPGAEDSRSQEDSKEKPPRSAGSSAAPTSSSDYWKDWPSAESPYSQGSELSMQGPSRSETPQSSPLPSSPLLPQAKPAKPVVPPLTPEQYEFYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQNVLPLQGQPQESTPKTSASCSPAPESPLSSAEESVKSLGDSAAQTPAPEPNEPSESQPGTPLPAPGHSGLSIQEMVAMSPELDTYVITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLSDPRNVEKLMDMKRMEKKAYMKRRHSSVSESQPADSGLAGGEFSQGSSPQHQQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELASQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGNQGAASEGGSPSARLGKAGEGDSCDGTESDGTVEGRPGGAQGPEEYGGPASEGEGADLKEEGGPETPARSPAPQDATTSASSAPGTSGHKGGAIASLFSFPETAPAASRNPRDSSLRKKKAANLNNIIHRLEKAASREEPSEWEF
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(758131..758614,758774..759041,763541..763729,767502..767771,777035..777194,778436..778762,780393..780892,782178..782279,785493..785573,787912..788667,792382..792478,793092..793140,795166..795224,795738..795926,796332..796436,799825..799873,821150..821216,822614..822690,826625..826748,828556..828693,835204..835282,847356..847403,874095..874205,899141..899146))
location: region:758131-899146:-1
so has part: feature:899141-899146:-1:exon
so has part: feature:874095-874205:-1:exon
so has part: feature:847356-847403:-1:exon
so has part: feature:835204-835282:-1:exon
so has part: feature:828556-828693:-1:exon
so has part: feature:826625-826748:-1:exon
so has part: feature:822614-822690:-1:exon
so has part: feature:821150-821216:-1:exon
so has part: feature:799825-799873:-1:exon
so has part: feature:796332-796436:-1:exon
so has part: feature:795738-795926:-1:exon
so has part: feature:795166-795224:-1:exon
so has part: feature:793092-793140:-1:exon
so has part: feature:792382-792478:-1:exon
so has part: feature:787912-788667:-1:exon
so has part: feature:785493-785573:-1:exon
so has part: feature:782178-782279:-1:exon
so has part: feature:780393-780892:-1:exon
so has part: feature:778436-778762:-1:exon
so has part: feature:777035-777194:-1:exon
so has part: feature:767502-767771:-1:exon
so has part: feature:763541-763729:-1:exon
so has part: feature:758774-759041:-1:exon
so has part: feature:758131-758614:-1:exon

XP_015223096.1
type: Protein
SIO_000068: ncbiprotein

position:758131:-1
position: 758131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899146:-1
position: 899146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:899141-899146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:874095-874205:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847356-847403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:835204-835282:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:828556-828693:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:826625-826748:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:822614-822690:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821150-821216:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:799825-799873:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:796332-796436:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:795738-795926:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:795166-795224:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:793092-793140:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:792382-792478:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:787912-788667:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:785493-785573:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:782178-782279:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:780393-780892:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:778436-778762:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:777035-777194:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:767502-767771:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:763541-763729:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:758774-759041:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:758131-758614:-1:exon

cux1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cux1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CASP isoform X4
translation: MCRAPSPSVSLFLWRCGSAAAALSTEPRSRQGFTLVSRGQGGGPPPSHVQLQACLVLPSQRELDATATVLANRQDESEQSRKKLIDQSREFKKNTPEDLRKQVAPLLKSFQAEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALELGQQLQLKVQRMHDVETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTVKNQAENLALEKEQQLHNDYAEKERKLQESQESLASKLEEADHKAQSLQTALETTQAELFDLKTKYDEESTAKADEIEMVMTDLERANQRAEAAEREAEALREQLTSANKSLQLATQIQKAPDVEQALEVLSRSSLEVELSAKEREIVQLVEDVQRLQASLSKLRENSASQISQLEQQLSSKNSTLKQLEEKLQEQADYEEVKKELNILKSMEFGPSEGSTAQDSSKPLEVLLLEKNRALQSESAGLRIANSELSGAAGRKGKEAQAESQQRVPATANTAATRQGSPPPPAPSQLLLRAGTSTNSSGAAEPASSANGTHQFSPSGLAQDFFSPSLAGPGSAFPLAGKVALNSLLQRQLMQTFYSKALQDSPSGTMLFAPGPYAATSLSASPLQQSQHQPAGSPDVNGMAPSPSQSEGAGSTSEGEDMDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTIRGKEPFHKMKQFLSDEQNILALRSIQGRQRGNITTRIRTPESGSDEAIKSILEQAKRELQVQKAAEPPPPQNSSGVPGGSGSSSDEAIRSILEQARREMEAQQVALEPVLKASSLSQSELSLLSPKLLASHSLTAIQGFSPLALSLKKPPVSASSALLDFHSSAMKKESGESPIPEVQGAADGGSKPGRTAEGARGGVPWREQWWNTVHSERRGAPTPGAEDSRSQEDSKEKPPRSAGSSAAPTSSSDYWKDWPSAESPYSQGSELSMQGPSRSETPQSSPLPSSPLLPQAKPAKPVVPPLTPEQYEFYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQNVLPLQGQPQESTPKTSASCSPAPESPLSSAEESVKSLGDSAAQTPAPEPNEPSESQPGTPLPAPGHSGLSIQEMVAMSPELDTYVITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLSDPRNVEKLMDMKRMEKKAYMKRRHSSVSESQPADSGLAGGEFSQGSSPQHQQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELASQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGNQGAASEGGSPSARLGKAGEGDSCDGTESDGTVEGRPGGAQGPEEYGGPASEGEGADLKEEGGPETPARSPAPQDATTSASSAPGTSGHKGGAIASLFSFPETAPAASRNPRDSSLRKKKAANLNNIIHRLEKAASREEPSEWEF
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(758131..758614,758774..759041,763541..763729,767502..767771,777035..777194,778436..778762,780393..780892,782178..782279,787912..788667,792382..792478,793092..793140,795166..795224,795738..795926,796332..796436,799825..799873,821150..821216,822614..822690,826625..826748,828556..828693,835204..835282,847356..847403,874095..874385))
location: region:758131-874385:-1
so has part: feature:874095-874385:-1:exon
so has part: feature:847356-847403:-1:exon
so has part: feature:835204-835282:-1:exon
so has part: feature:828556-828693:-1:exon
so has part: feature:826625-826748:-1:exon
so has part: feature:822614-822690:-1:exon
so has part: feature:821150-821216:-1:exon
so has part: feature:799825-799873:-1:exon
so has part: feature:796332-796436:-1:exon
so has part: feature:795738-795926:-1:exon
so has part: feature:795166-795224:-1:exon
so has part: feature:793092-793140:-1:exon
so has part: feature:792382-792478:-1:exon
so has part: feature:787912-788667:-1:exon
so has part: feature:782178-782279:-1:exon
so has part: feature:780393-780892:-1:exon
so has part: feature:778436-778762:-1:exon
so has part: feature:777035-777194:-1:exon
so has part: feature:767502-767771:-1:exon
so has part: feature:763541-763729:-1:exon
so has part: feature:758774-759041:-1:exon
so has part: feature:758131-758614:-1:exon

XP_015223097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:874095-874385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:847356-847403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835204-835282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828556-828693:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826625-826748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:822614-822690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821150-821216:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799825-799873:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:796332-796436:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:795738-795926:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:795166-795224:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:793092-793140:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:792382-792478:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:787912-788667:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:782178-782279:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:780393-780892:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:778436-778762:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:777035-777194:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:767502-767771:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:763541-763729:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:758774-759041:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:758131-758614:-1:exon

cux1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cux1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CASP isoform X2
translation: MCRAPSPSVSLFLWRCGSAAAALSTEPRSRQGFTLVSRGQGGGPPPSHVQLQACLVLPSQRELDATATVLANRQDESEQSRKKLIDQSREFKKNTPEDLRKQVAPLLKSFQAEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALELGQQLQLKVQRMHDVETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTVKNQAENLALEKEQQLHNDYAEKERKLQESQESLASKLEEADHKAQSLQTALETTQAELFDLKTKYDEESTAKADEIEMVMTDLERANQRAEAAEREAEALREQLTSANKSLQLATQIQKAPDVEQALEVLSRSSLEVELSAKEREIVQLVEDVQRLQASLSKLRENSASQISQLEQQLSSKNSTLKQLEEKLQEQADYEEVKKELNILKSMEFGPSEGSTAQDSSKPLEVLLLEKNRALQSESAGLRIANSELSGAAGRKGKEAQAESQQRVPATANTAATRQGSPPPPAPSQLLLRAGTSTNSSGAAEPASSANGTHQFSPSGLAQDFFSPSLAGPGSAFPLAGKVALNSLLQRQLMQTFYSKALQDSPSGTMLFAPGPYAATSLSASPLQQSQHQPAGSPDVNGMAPSPSQSEGAGSTSEGEDMDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTIRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRVFQEVPKRRTGSEGSSRPGNITTRIRTPESGSDEAIKSILEQAKRELQVQKAEPPPPQNSSGVPGGSGSSSDEAIRSILEQARREMEAQQVALEPVLKASSLSQSELSLLSPKLLASHSLTAIQGFSPLALSLKKPPVSASSALLDFHSSAMKKESGESPIPEVQGAADGGSKPGRTAEGARGGVPWREQWWNTVHSERRGAPTPGAEDSRSQEDSKEKPPRSAGSSAAPTSSSDYWKDWPSAESPYSQGSELSMQGPSRSETPQSSPLPSSPLLPQAKPAKPVVPPLTPEQYEFYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQNVLPLQGQPQESTPKTSASCSPAPESPLSSAEESVKSLGDSAAQTPAPEPNEPSESQPGTPLPAPGHSGLSIQEMVAMSPELDTYVITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLSDPRNVEKLMDMKRMEKKAYMKRRHSSVSESQPADSGLAGGEFSQGSSPQHQQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELASQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGNQGAASEGGSPSARLGKAGEGDSCDGTESDGTVEGRPGGAQGPEEYGGPASEGEGADLKEEGGPETPARSPAPQDATTSASSAPGTSGHKGGAIASLFSFPETAPAASRNPRDSSLRKKKAANLNNIIHRLEKAASREEPSEWEF
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(758131..758614,758774..759041,763541..763729,767502..767771,777035..777194,778436..778762,780393..780889,782178..782279,785493..785573,787912..788667,792382..792478,793092..793140,795166..795224,795738..795926,796332..796436,799825..799873,821150..821216,822614..822690,826625..826748,828556..828693,835204..835282,847356..847403,874095..874385))
location: region:758131-874385:-1
so has part: feature:874095-874385:-1:exon
so has part: feature:847356-847403:-1:exon
so has part: feature:835204-835282:-1:exon
so has part: feature:828556-828693:-1:exon
so has part: feature:826625-826748:-1:exon
so has part: feature:822614-822690:-1:exon
so has part: feature:821150-821216:-1:exon
so has part: feature:799825-799873:-1:exon
so has part: feature:796332-796436:-1:exon
so has part: feature:795738-795926:-1:exon
so has part: feature:795166-795224:-1:exon
so has part: feature:793092-793140:-1:exon
so has part: feature:792382-792478:-1:exon
so has part: feature:787912-788667:-1:exon
so has part: feature:785493-785573:-1:exon
so has part: feature:782178-782279:-1:exon
so has part: feature:780393-780889:-1:exon
so has part: feature:778436-778762:-1:exon
so has part: feature:777035-777194:-1:exon
so has part: feature:767502-767771:-1:exon
so has part: feature:763541-763729:-1:exon
so has part: feature:758774-759041:-1:exon
so has part: feature:758131-758614:-1:exon

XP_015223095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:874095-874385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:847356-847403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835204-835282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828556-828693:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826625-826748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:822614-822690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821150-821216:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799825-799873:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:796332-796436:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:795738-795926:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:795166-795224:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:793092-793140:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:792382-792478:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:787912-788667:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:785493-785573:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:782178-782279:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:780393-780889:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:778436-778762:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:777035-777194:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:767502-767771:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:763541-763729:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:758774-759041:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:758131-758614:-1:exon

cux1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cux1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CASP isoform X6
translation: MCRAPSPSVSLFLWRCGSAAAALSTEPRSRQGFTLVSRGQGGGPPPSHVQLQACLVLPSQRELDATATVLANRQDESEQSRKKLIDQSREFKKNTPEDLRKQVAPLLKSFQAEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALELGQQLQLKVQRMHDVETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTVKNQAENLALEKEQQLHNDYAEKERKLQESQESLASKLEEADHKAQSLQTALETTQAELFDLKTKYDEESTAKADEIEMVMTDLERANQRAEAAEREAEALREQLTSANKSLQLATQIQKAPDVEQALEVLSRSSLEVELSAKEREIVQLVEDVQRLQASLSKLRENSASQISQLEQQLSSKNSTLKQLEEKLQEQADYEEVKKELNILKSMEFGPSEGSTAQDSSKPLEVLLLEKNRALQSESAGLRIANSELSGAAGRKGKEAQAESQQRVPATANTAATRQGSPPPPAPSQLLLRAGTSTNSSGAAEPASSANGTHQFSPSGLAQDFFSPSLAGPGSAFPLAGKVALNSLLQRQLMQTFYSKALQDSPSGTMLFAPGPYAATSLSASPLQQSQHQPAGSPDVNGMAPSPSQSEGAGSTSEGEDMDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTIRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRVFQEVPKRRTGSEGSSRPGNITTRIRTPESGSDEAIKSILEQAKRELQVQKAAEPPPPQNSSGVPGGSGSSSDEAIRSILEQARREMEAQQVALEPVLKASSLSQSELSLLSPKLLASHSLTAIQGFSPLALSLKKPPVSASSALLDFHSSAMKKESGESPIPEVQGAADGGSKPGRTAEGARGGVPWREQWWNTVHSERRGAPTPGAEDSRSQEDSKEVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQNVLPLQGQPQESTPKTSASCSPAPESPLSSAEESVKSLGDSAAQTPAPEPNEPSESQPGTPLPAPGHSGLSIQEMVAMSPELDTYVITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLSDPRNVEKLMDMKRMEKKAYMKRRHSSVSESQPADSGLAGGEFSQGSSPQHQQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELASQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGNQGAASEGGSPSARLGKAGEGDSCDGTESDGTVEGRPGGAQGPEEYGGPASEGEGADLKEEGGPETPARSPAPQDATTSASSAPGTSGHKGGAIASLFSFPETAPAASRNPRDSSLRKKKAANLNNIIHRLEKAASREEPSEWEF
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(758131..758614,758774..759041,763541..763729,767502..767771,777035..777194,780393..780892,782178..782279,785493..785573,787912..788667,792382..792478,793092..793140,795166..795224,795738..795926,796332..796436,799825..799873,821150..821216,822614..822690,826625..826748,828556..828693,835204..835282,847356..847403,874095..874385))
location: region:758131-874385:-1
so has part: feature:874095-874385:-1:exon
so has part: feature:847356-847403:-1:exon
so has part: feature:835204-835282:-1:exon
so has part: feature:828556-828693:-1:exon
so has part: feature:826625-826748:-1:exon
so has part: feature:822614-822690:-1:exon
so has part: feature:821150-821216:-1:exon
so has part: feature:799825-799873:-1:exon
so has part: feature:796332-796436:-1:exon
so has part: feature:795738-795926:-1:exon
so has part: feature:795166-795224:-1:exon
so has part: feature:793092-793140:-1:exon
so has part: feature:792382-792478:-1:exon
so has part: feature:787912-788667:-1:exon
so has part: feature:785493-785573:-1:exon
so has part: feature:782178-782279:-1:exon
so has part: feature:780393-780892:-1:exon
so has part: feature:777035-777194:-1:exon
so has part: feature:767502-767771:-1:exon
so has part: feature:763541-763729:-1:exon
so has part: feature:758774-759041:-1:exon
so has part: feature:758131-758614:-1:exon

XP_015223099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:874095-874385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:847356-847403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835204-835282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828556-828693:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826625-826748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:822614-822690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821150-821216:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799825-799873:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:796332-796436:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:795738-795926:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:795166-795224:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:793092-793140:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:792382-792478:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:787912-788667:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:785493-785573:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:782178-782279:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:780393-780892:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:777035-777194:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:767502-767771:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:763541-763729:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:758774-759041:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:758131-758614:-1:exon

cux1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cux1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CASP isoform X5
translation: MCRAPSPSVSLFLWRCGSAAAALSTEPRSRQGFTLVSRGQGGGPPPSHVQLQACLVLPSQRELDATATVLANRQDESEQSRKKLIDQSREFKKNTPEDLRKQVAPLLKSFQAEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALELGQQLQLKVQRMHDVETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTVKNQAENLALEKEQQLHNDYAEKERKLQESQESLASKLEEADHKAQSLQTALETTQAELFDLKTKYDEESTAKADEIEMVMTDLERANQRAEAAEREAEALREQLTSANKSLQLATQIQKAPDVEQALEVLSRSSLEVELSAKEREIVQLVEDVQRLQASLSKLRENSASQISQLEQQLSSKNSTLKQLEEKLQEQADYEEVKKELNILKSMEFGPSEGSTAQDSSKPLEVLLLEKNRALQSESAGLRIANSELSGAAGRKGKEAQAESQQRVPATANTAATRQGSPPPPAPSQLLLRAGTSTNSSGAAEPASSANGTHQFSPSGLAQDFFSPSLAGPGSAFPLAGKVALNSLLQRQLMQTFYSKALQDSPSGTMLFAPGPYAATSLSASPLQQSQHQPAGSPDVNGMAPSPSQSEGAGSTSEGEDMDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTIRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRVFQEVPKRRTGSEGSSRPGNITTRIRTPESGSDEAIKSILEQAKRELQVQKAAEPPPPQNSSGVPGGSGSSSDEAIRSILEQARREMEAQQVALEPVLKASSLSQSELSLLSPKLLASHSLTAIQGFSPLALSLKKPPVSASSALLDFHSSAMKKESGESPIPEVQGAADGGSKPGRTAEGARGGVPWREQWWNTVHSERRGAPTPGAEDSRSQEDSKEKPPRSAGSSAAPTSSSDYWKDWPSAESPYSQGSELSMQGPSRSETPQSSPLPSSPLLPQAKPAKPVVPPLTPEQYEFYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQNVLPLQGQPQESTPKTSASCSPAPESPLSSAEESVKSLGDSAAQTPAPEPNEPSESQPGTPLPAPGHSGLSIQEMVAMSPELDTYVITKKVKEVLTDNNLAYMKRRHSSVSESQPADSGLAGGEFSQGSSPQHQQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELASQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGNQGAASEGGSPSARLGKAGEGDSCDGTESDGTVEGRPGGAQGPEEYGGPASEGEGADLKEEGGPETPARSPAPQDATTSASSAPGTSGHKGGAIASLFSFPETAPAASRNPRDSSLRKKKAANLNNIIHRLEKAASREEPSEWEF
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(758131..758614,758774..759041,767502..767771,777035..777194,778436..778762,780393..780892,782178..782279,785493..785573,787912..788667,792382..792478,793092..793140,795166..795224,795738..795926,796332..796436,799825..799873,821150..821216,822614..822690,826625..826748,828556..828693,835204..835282,847356..847403,874095..874385))
location: region:758131-874385:-1
so has part: feature:874095-874385:-1:exon
so has part: feature:847356-847403:-1:exon
so has part: feature:835204-835282:-1:exon
so has part: feature:828556-828693:-1:exon
so has part: feature:826625-826748:-1:exon
so has part: feature:822614-822690:-1:exon
so has part: feature:821150-821216:-1:exon
so has part: feature:799825-799873:-1:exon
so has part: feature:796332-796436:-1:exon
so has part: feature:795738-795926:-1:exon
so has part: feature:795166-795224:-1:exon
so has part: feature:793092-793140:-1:exon
so has part: feature:792382-792478:-1:exon
so has part: feature:787912-788667:-1:exon
so has part: feature:785493-785573:-1:exon
so has part: feature:782178-782279:-1:exon
so has part: feature:780393-780892:-1:exon
so has part: feature:778436-778762:-1:exon
so has part: feature:777035-777194:-1:exon
so has part: feature:767502-767771:-1:exon
so has part: feature:758774-759041:-1:exon
so has part: feature:758131-758614:-1:exon

XP_015223098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:874095-874385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:847356-847403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835204-835282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828556-828693:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826625-826748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:822614-822690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821150-821216:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799825-799873:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:796332-796436:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:795738-795926:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:795166-795224:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:793092-793140:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:792382-792478:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:787912-788667:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:785493-785573:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:782178-782279:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:780393-780892:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:778436-778762:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:777035-777194:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:767502-767771:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:758774-759041:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:758131-758614:-1:exon

cux1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cux1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CASP isoform X1
translation: MCRAPSPSVSLFLWRCGSAAAALSTEPRSRQGFTLVSRGQGGGPPPSHVQLQACLVLPSQRELDATATVLANRQDESEQSRKKLIDQSREFKKNTPEDLRKQVAPLLKSFQAEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALELGQQLQLKVQRMHDVETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTVKNQAENLALEKEQQLHNDYAEKERKLQESQESLASKLEEADHKAQSLQTALETTQAELFDLKTKYDEESTAKADEIEMVMTDLERANQRAEAAEREAEALREQLTSANKSLQLATQIQKAPDVEQALEVLSRSSLEVELSAKEREIVQLVEDVQRLQASLSKLRENSASQISQLEQQLSSKNSTLKQLEEKLQEQADYEEVKKELNILKSMEFGPSEGSTAQDSSKPLEVLLLEKNRALQSESAGLRIANSELSGAAGRKGKEAQAESQQRVPATANTAATRQGSPPPPAPSQLLLRAGTSTNSSGAAEPASSANGTHQFSPSGLAQDFFSPSLAGPGSAFPLAGKVALNSLLQRQLMQTFYSKALQDSPSGTMLFAPGPYAATSLSASPLQQSQHQPAGSPDVNGMAPSPSQSEGAGSTSEGEDMDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTIRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRVFQEVPKRRTGSEGSSRPGNITTRIRTPESGSDEAIKSILEQAKRELQVQKAAEPPPPQNSSGVPGGSGSSSDEAIRSILEQARREMEAQQVALEPVLKASSLSQSELSLLSPKLLASHSLTAIQGFSPLALSLKKPPVSASSALLDFHSSAMKKESGESPIPEVQGAADGGSKPGRTAEGARGGVPWREQWWNTVHSERRGAPTPGAEDSRSQEDSKEKPPRSAGSSAAPTSSSDYWKDWPSAESPYSQGSELSMQGPSRSETPQSSPLPSSPLLPQAKPAKPVVPPLTPEQYEFYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQNVLPLQGQPQESTPKTSASCSPAPESPLSSAEESVKSLGDSAAQTPAPEPNEPSESQPGTPLPAPGHSGLSIQEMVAMSPELDTYVITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLSDPRNVEKLMDMKRMEKKAYMKRRHSSVSESQPADSGLAGGEFSQGSSPQHQQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELASQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGNQGAASEGGSPSARLGKAGEGDSCDGTESDGTVEGRPGGAQGPEEYGGPASEGEGADLKEEGGPETPARSPAPQDATTSASSAPGTSGHKGGAIASLFSFPETAPAASRNPRDSSLRKKKAANLNNIIHRLEKAASREEPSEWEF
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(758131..758614,758774..759041,763541..763729,767502..767771,777035..777194,778436..778762,780393..780892,782178..782279,785493..785573,787912..788667,792382..792478,793092..793140,795166..795224,795738..795926,796332..796436,799825..799873,821150..821216,822614..822690,826625..826748,828556..828693,835204..835282,847356..847403,874095..874385))
location: region:758131-874385:-1
so has part: feature:874095-874385:-1:exon
so has part: feature:847356-847403:-1:exon
so has part: feature:835204-835282:-1:exon
so has part: feature:828556-828693:-1:exon
so has part: feature:826625-826748:-1:exon
so has part: feature:822614-822690:-1:exon
so has part: feature:821150-821216:-1:exon
so has part: feature:799825-799873:-1:exon
so has part: feature:796332-796436:-1:exon
so has part: feature:795738-795926:-1:exon
so has part: feature:795166-795224:-1:exon
so has part: feature:793092-793140:-1:exon
so has part: feature:792382-792478:-1:exon
so has part: feature:787912-788667:-1:exon
so has part: feature:785493-785573:-1:exon
so has part: feature:782178-782279:-1:exon
so has part: feature:780393-780892:-1:exon
so has part: feature:778436-778762:-1:exon
so has part: feature:777035-777194:-1:exon
so has part: feature:767502-767771:-1:exon
so has part: feature:763541-763729:-1:exon
so has part: feature:758774-759041:-1:exon
so has part: feature:758131-758614:-1:exon

XP_015223094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:874095-874385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:847356-847403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835204-835282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828556-828693:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826625-826748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:822614-822690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821150-821216:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799825-799873:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:796332-796436:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:795738-795926:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:795166-795224:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:793092-793140:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:792382-792478:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:787912-788667:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:785493-785573:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:782178-782279:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:780393-780892:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:778436-778762:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:777035-777194:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:767502-767771:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:763541-763729:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:758774-759041:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:758131-758614:-1:exon

LOC102688000
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102688000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 931342..938423
location: region:931342-938423:1
so has part: feature:931342-938423:1:exon
subclass of: SO_0000010

102688000
type: Gene
SIO_000068: ncbigene

position:931342:1
position: 931342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:938423:1
position: 938423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931342-938423:1:exon

LOC102688000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102688000
product: myosin regulatory light chain 2B, cardiac muscle isoform
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_006640808.2
SIO_010081: LOC102688000
subclass of: SO_0000673
so part of: LOC102688000
location: join(931342..931453,933611..933700,934179..934254,934826..934930,935608..935686,936475..936523,938140..938423)
location: region:931342-938423:1
so has part: feature:931342-931453:1:exon
so has part: feature:933611-933700:1:exon
so has part: feature:934179-934254:1:exon
so has part: feature:934826-934930:1:exon
so has part: feature:935608-935686:1:exon
so has part: feature:936475-936523:1:exon
so has part: feature:938140-938423:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:931342-931453:1:exon

position:931453:1
position: 931453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:933611-933700:1:exon

position:933611:1
position: 933611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933700:1
position: 933700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:934179-934254:1:exon

position:934179:1
position: 934179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934254:1
position: 934254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:934826-934930:1:exon

position:934826:1
position: 934826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934930:1
position: 934930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:935608-935686:1:exon

position:935608:1
position: 935608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935686:1
position: 935686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:936475-936523:1:exon

position:936475:1
position: 936475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936523:1
position: 936523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:938140-938423:1:exon

position:938140:1
position: 938140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102688000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102688000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin regulatory light chain 2B, cardiac muscle isoform
translation: MAPKKAKKRAEGASSNVFAMFEQSQIQEFKEAFTIMDQNRDGFIDKQDLRDTFAALGRLNVNNEELEDMLKEAPGAINFTVFLTMFGEKLKGSDPEETILNAFKIFDPDAKGHINAEYIKRMLMTQADKFSAEEVQQMFSAFPPDVSGNLDYKNLCYVITHGEEKDQE
SIO_010081: LOC102688000
subclass of: SO_0000673
so part of: LOC102688000
location: join(931451..931453,933611..933700,934179..934254,934826..934930,935608..935686,936475..936523,938140..938244)
location: region:931451-938244:1
so has part: feature:931451-931453:1:exon
so has part: feature:933611-933700:1:exon
so has part: feature:934179-934254:1:exon
so has part: feature:934826-934930:1:exon
so has part: feature:935608-935686:1:exon
so has part: feature:936475-936523:1:exon
so has part: feature:938140-938244:1:exon

XP_006640871.2
type: Protein
SIO_000068: ncbiprotein

position:931451:1
position: 931451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:938244:1
position: 938244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931451-931453:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933611-933700:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934179-934254:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:934826-934930:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:935608-935686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:936475-936523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:938140-938244:1:exon

LOC102697584
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102697584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(940327..978271)
location: region:940327-978271:-1
so has part: feature:940327-978271:-1:exon
subclass of: SO_0000010

102697584
type: Gene
SIO_000068: ncbigene

position:940327:-1
position: 940327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978271:-1
position: 978271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:940327-978271:-1:exon

LOC102697584
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102697584
product: collagen alpha-1(XXVI) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015367826.1
SIO_010081: LOC102697584
subclass of: SO_0000673
so part of: LOC102697584
location: complement(join(940327..942082,942515..942599,942870..942926,943838..943873,944361..944423,945788..945840,947113..947214,951213..951362,952488..952577,954197..954293,954465..954526,972839..972936,974400..974522,977405..978271))
location: region:940327-978271:-1
so has part: feature:977405-978271:-1:exon
so has part: feature:974400-974522:-1:exon
so has part: feature:972839-972936:-1:exon
so has part: feature:954465-954526:-1:exon
so has part: feature:954197-954293:-1:exon
so has part: feature:952488-952577:-1:exon
so has part: feature:951213-951362:-1:exon
so has part: feature:947113-947214:-1:exon
so has part: feature:945788-945840:-1:exon
so has part: feature:944361-944423:-1:exon
so has part: feature:943838-943873:-1:exon
so has part: feature:942870-942926:-1:exon
so has part: feature:942515-942599:-1:exon
so has part: feature:940327-942082:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:977405-978271:-1:exon

position:977405:-1
position: 977405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:974400-974522:-1:exon

position:974400:-1
position: 974400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974522:-1
position: 974522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:972839-972936:-1:exon

position:972839:-1
position: 972839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972936:-1
position: 972936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:954465-954526:-1:exon

position:954465:-1
position: 954465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954526:-1
position: 954526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:954197-954293:-1:exon

position:954197:-1
position: 954197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954293:-1
position: 954293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:952488-952577:-1:exon

position:952488:-1
position: 952488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952577:-1
position: 952577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:951213-951362:-1:exon

position:951213:-1
position: 951213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951362:-1
position: 951362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:947113-947214:-1:exon

position:947113:-1
position: 947113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947214:-1
position: 947214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:945788-945840:-1:exon

position:945788:-1
position: 945788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945840:-1
position: 945840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:944361-944423:-1:exon

position:944361:-1
position: 944361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944423:-1
position: 944423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:943838-943873:-1:exon

position:943838:-1
position: 943838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943873:-1
position: 943873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:942870-942926:-1:exon

position:942870:-1
position: 942870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942926:-1
position: 942926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:942515-942599:-1:exon

position:942515:-1
position: 942515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942599:-1
position: 942599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:940327-942082:-1:exon

position:942082:-1
position: 942082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102697584
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102697584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain-like
translation: MAAVLYSLLLGSLLVCVANSSGFVYQFPAVSITHLGAEQEAGPPASARAHRRNWCPYTVSKTVSCQVHNGTETLVQRVFQSCRWPRPCPNLVRTLVRPTYRVAYRLVTALEWRCCPGFLGDDCSEECINCTAFADMNNRLEILESKILMVESSWNFSSPGDTERPIRPVGPSWPVEPQGPPGDDGPFGPPGPRGERGPPGPSGPVGPPGPEGKRGLPGEMGMPGPPGLPGAPGPPGPVGPPEISSEPRGDVLRRMAVEYEEHPQFHHPGRPCHLSPPGPPCPPGIPGPPGPPGPPGPVGPPGLPGMPGRDAEGGQSGQVGEPGPRGDPGERGPPGFTGERGQPGDPGPKGEPGEPGKPGESEVEGVQQIREALKILAERVLILEHMNGVYGVTVEPGSGWDVLTDSAQSPAVSTRTKRGGWSDLLSTLLQGSRSAGAQDRQGRGRGRD
SIO_010081: LOC102697584
subclass of: SO_0000673
so part of: LOC102697584
location: complement(join(941907..942082,942515..942599,942870..942926,943838..943873,944361..944423,945788..945840,947113..947214,951213..951362,952488..952577,954197..954293,954465..954526,972839..972936,974400..974522,977405..977559))
location: region:941907-977559:-1
so has part: feature:977405-977559:-1:exon
so has part: feature:974400-974522:-1:exon
so has part: feature:972839-972936:-1:exon
so has part: feature:954465-954526:-1:exon
so has part: feature:954197-954293:-1:exon
so has part: feature:952488-952577:-1:exon
so has part: feature:951213-951362:-1:exon
so has part: feature:947113-947214:-1:exon
so has part: feature:945788-945840:-1:exon
so has part: feature:944361-944423:-1:exon
so has part: feature:943838-943873:-1:exon
so has part: feature:942870-942926:-1:exon
so has part: feature:942515-942599:-1:exon
so has part: feature:941907-942082:-1:exon

XP_015223312.1
type: Protein
SIO_000068: ncbiprotein

position:941907:-1
position: 941907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977559:-1
position: 977559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:977405-977559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974400-974522:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:972839-972936:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:954465-954526:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:954197-954293:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:952488-952577:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:951213-951362:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:947113-947214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:945788-945840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:944361-944423:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:943838-943873:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:942870-942926:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:942515-942599:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:941907-942082:-1:exon

mmp28
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: mmp28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(980339..998484)
location: region:980339-998484:-1
so has part: feature:980339-998484:-1:exon
subclass of: SO_0000010

102697774
type: Gene
SIO_000068: ncbigene

position:980339:-1
position: 980339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998484:-1
position: 998484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980339-998484:-1:exon

mmp28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mmp28
product: matrix metallopeptidase 28, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015367270.1
SIO_010081: mmp28
subclass of: SO_0000673
so part of: mmp28
location: complement(join(980339..981640,982201..982368,983101..983247,985794..986039,986566..986787,990796..990992,997969..998484))
location: region:980339-998484:-1
so has part: feature:997969-998484:-1:exon
so has part: feature:990796-990992:-1:exon
so has part: feature:986566-986787:-1:exon
so has part: feature:985794-986039:-1:exon
so has part: feature:983101-983247:-1:exon
so has part: feature:982201-982368:-1:exon
so has part: feature:980339-981640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:997969-998484:-1:exon

position:997969:-1
position: 997969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:990796-990992:-1:exon

position:990796:-1
position: 990796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990992:-1
position: 990992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:986566-986787:-1:exon

position:986566:-1
position: 986566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986787:-1
position: 986787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:985794-986039:-1:exon

position:985794:-1
position: 985794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986039:-1
position: 986039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:983101-983247:-1:exon

position:983101:-1
position: 983101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983247:-1
position: 983247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:982201-982368:-1:exon

position:982201:-1
position: 982201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982368:-1
position: 982368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:980339-981640:-1:exon

position:981640:-1
position: 981640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mmp28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mmp28
product: matrix metallopeptidase 28, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_006640950.2
SIO_010081: mmp28
subclass of: SO_0000673
so part of: mmp28
location: complement(join(980339..981640,982201..982368,983101..983247,985794..986039,986566..986787,990796..990992,991114..991137))
location: region:980339-991137:-1
so has part: feature:991114-991137:-1:exon
so has part: feature:990796-990992:-1:exon
so has part: feature:986566-986787:-1:exon
so has part: feature:985794-986039:-1:exon
so has part: feature:983101-983247:-1:exon
so has part: feature:982201-982368:-1:exon
so has part: feature:980339-981640:-1:exon

position:991137:-1
position: 991137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991114-991137:-1:exon

position:991114:-1
position: 991114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:990796-990992:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:986566-986787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:985794-986039:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:983101-983247:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982201-982368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:980339-981640:-1:exon

mmp28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mmp28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrix metalloproteinase-28 isoform X1
translation: MAAVASSREFQWLSHLPVTGKLDSATLWLMSRPRCGVGDGESHSAWAQRVRGIFSGMGGRGARRHRSKRYSQQGEKWSKRQLTYRLVNWPRHLSPGQVRLAVRAAFQLWSNASALAFRELTHGPADIRLAFYEGEHNDGTGNAFDGPGGALAHAFFPCRGEAHFDMAERWTLNGHKGHNLFVVTAHEIGHTLGLEHSPVRNALMSPYYKKLGRAFVLSWDDIAAVQRLYGKPPSGLAVQLPGQVYSSFLQDWESTEGTQGPGPALPPYCQTFFDAITMDQNRTVYVFRGARFWTVSAQGRASAALPLQRRWPQLPASVEAAAVSPPEGKFYFFRGGRFWRFSGSRLDPGFPRRSSAAGLPRHPDYAFYYPPLGNMVLVKGPRYFVLNLRSLTPEPYYPRGLADWKGLPQGANGAVGRPDGLYFFKDELFWRFDPGRVRVVSRGRWAPELEWTGCQRAHGTDANSVH
SIO_010081: mmp28
subclass of: SO_0000673
so part of: mmp28
location: complement(join(981243..981640,982201..982368,983101..983247,985794..986039,986566..986787,990796..990992,991114..991136))
location: region:981243-991136:-1
so has part: feature:991114-991136:-1:exon
so has part: feature:990796-990992:-1:exon
so has part: feature:986566-986787:-1:exon
so has part: feature:985794-986039:-1:exon
so has part: feature:983101-983247:-1:exon
so has part: feature:982201-982368:-1:exon
so has part: feature:981243-981640:-1:exon

XP_006641013.2
type: Protein
SIO_000068: ncbiprotein

position:981243:-1
position: 981243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991136:-1
position: 991136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991114-991136:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:990796-990992:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:986566-986787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:985794-986039:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:983101-983247:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982201-982368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:981243-981640:-1:exon

mmp28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mmp28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrix metalloproteinase-28 isoform X2
translation: MSRPRCGVGDGESHSAWAQRVRGIFSGMGGRGARRHRSKRYSQQGEKWSKRQLTYRLVNWPRHLSPGQVRLAVRAAFQLWSNASALAFRELTHGPADIRLAFYEGEHNDGTGNAFDGPGGALAHAFFPCRGEAHFDMAERWTLNGHKGHNLFVVTAHEIGHTLGLEHSPVRNALMSPYYKKLGRAFVLSWDDIAAVQRLYGKPPSGLAVQLPGQVYSSFLQDWESTEGTQGPGPALPPYCQTFFDAITMDQNRTVYVFRGARFWTVSAQGRASAALPLQRRWPQLPASVEAAAVSPPEGKFYFFRGGRFWRFSGSRLDPGFPRRSSAAGLPRHPDYAFYYPPLGNMVLVKGPRYFVLNLRSLTPEPYYPRGLADWKGLPQGANGAVGRPDGLYFFKDELFWRFDPGRVRVVSRGRWAPELEWTGCQRAHGTDANSVH
SIO_010081: mmp28
subclass of: SO_0000673
so part of: mmp28
location: complement(join(981243..981640,982201..982368,983101..983247,985794..986039,986566..986787,990796..990928))
location: region:981243-990928:-1
so has part: feature:990796-990928:-1:exon
so has part: feature:986566-986787:-1:exon
so has part: feature:985794-986039:-1:exon
so has part: feature:983101-983247:-1:exon
so has part: feature:982201-982368:-1:exon
so has part: feature:981243-981640:-1:exon

XP_015222756.1
type: Protein
SIO_000068: ncbiprotein

position:990928:-1
position: 990928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:990796-990928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:986566-986787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985794-986039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:983101-983247:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:982201-982368:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:981243-981640:-1:exon

taf15
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: taf15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(999253..1011365)
location: region:999253-1011365:-1
so has part: feature:999253-1011365:-1:exon
subclass of: SO_0000010

102697975
type: Gene
SIO_000068: ncbigene

position:999253:-1
position: 999253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011365:-1
position: 1011365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:999253-1011365:-1:exon

taf15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: taf15
product: TATA-box binding protein associated factor 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015367810.1
SIO_010081: taf15
subclass of: SO_0000673
so part of: taf15
location: complement(join(999253..999604,1000049..1000148,1000448..1000527,1001890..1001974,1002383..1002466,1002949..1003078,1003268..1003377,1004126..1004155,1004691..1004725,1008175..1008253,1008962..1009023,1009229..1009316,1009741..1009825,1010107..1010155,1010640..1010676,1011232..1011365))
location: region:999253-1011365:-1
so has part: feature:1011232-1011365:-1:exon
so has part: feature:1010640-1010676:-1:exon
so has part: feature:1010107-1010155:-1:exon
so has part: feature:1009741-1009825:-1:exon
so has part: feature:1009229-1009316:-1:exon
so has part: feature:1008962-1009023:-1:exon
so has part: feature:1008175-1008253:-1:exon
so has part: feature:1004691-1004725:-1:exon
so has part: feature:1004126-1004155:-1:exon
so has part: feature:1003268-1003377:-1:exon
so has part: feature:1002949-1003078:-1:exon
so has part: feature:1002383-1002466:-1:exon
so has part: feature:1001890-1001974:-1:exon
so has part: feature:1000448-1000527:-1:exon
so has part: feature:1000049-1000148:-1:exon
so has part: feature:999253-999604:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1011232-1011365:-1:exon

position:1011232:-1
position: 1011232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1010640-1010676:-1:exon

position:1010640:-1
position: 1010640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010676:-1
position: 1010676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1010107-1010155:-1:exon

position:1010107:-1
position: 1010107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010155:-1
position: 1010155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1009741-1009825:-1:exon

position:1009741:-1
position: 1009741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009825:-1
position: 1009825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1009229-1009316:-1:exon

position:1009229:-1
position: 1009229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009316:-1
position: 1009316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1008962-1009023:-1:exon

position:1008962:-1
position: 1008962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009023:-1
position: 1009023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1008175-1008253:-1:exon

position:1008175:-1
position: 1008175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008253:-1
position: 1008253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1004691-1004725:-1:exon

position:1004691:-1
position: 1004691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004725:-1
position: 1004725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1004126-1004155:-1:exon

position:1004126:-1
position: 1004126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004155:-1
position: 1004155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1003268-1003377:-1:exon

position:1003268:-1
position: 1003268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003377:-1
position: 1003377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1002949-1003078:-1:exon

position:1002949:-1
position: 1002949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003078:-1
position: 1003078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1002383-1002466:-1:exon

position:1002383:-1
position: 1002383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002466:-1
position: 1002466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1001890-1001974:-1:exon

position:1001890:-1
position: 1001890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001974:-1
position: 1001974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1000448-1000527:-1:exon

position:1000448:-1
position: 1000448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1000527:-1
position: 1000527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1000049-1000148:-1:exon

position:1000049:-1
position: 1000049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1000148:-1
position: 1000148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:999253-999604:-1:exon

position:999604:-1
position: 999604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

taf15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: taf15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TATA-binding protein-associated factor 2N
translation: MASDPGYGQPVAQQQSYPSYGAPPSQGYQTTQSYGQGSDGSASYGQSYGGYGSTYGQSQPAGSYGQATPSYSSGAYGQQPAGDSSETSGGYGGKSSYGHQQGGYGRRNPEDDGGQSEGYRGRGGYDREGRGPFSGMGGGDRGGFKNFGGPKDYGQKEAGGEQDNSDNNTIFVQGLAEDTSTDEVANFFKQIGIIKVNKKTGQPMINLYTDKATGKLKGEATVSFDDPPSAKAAIDWFDGKDFNGRTIKVSFATRRPEFLQRGSRGRGSRGYGGRGGYGGGPGADMKGGDWLCPNPSCGNMNFARRMECNQCGTPKPGDASGDRGGGRGGFRGRGGFRGGDRGGDRGGYGWKMGGRGEQRGDRRERPY
SIO_010081: taf15
subclass of: SO_0000673
so part of: taf15
location: complement(join(999565..999604,1000049..1000148,1000448..1000527,1001890..1001974,1002383..1002466,1002949..1003078,1003268..1003377,1004126..1004155,1004691..1004725,1008175..1008253,1008962..1009023,1009229..1009316,1009741..1009825,1010107..1010155,1010640..1010676,1011232..1011241))
location: region:999565-1011241:-1
so has part: feature:1011232-1011241:-1:exon
so has part: feature:1010640-1010676:-1:exon
so has part: feature:1010107-1010155:-1:exon
so has part: feature:1009741-1009825:-1:exon
so has part: feature:1009229-1009316:-1:exon
so has part: feature:1008962-1009023:-1:exon
so has part: feature:1008175-1008253:-1:exon
so has part: feature:1004691-1004725:-1:exon
so has part: feature:1004126-1004155:-1:exon
so has part: feature:1003268-1003377:-1:exon
so has part: feature:1002949-1003078:-1:exon
so has part: feature:1002383-1002466:-1:exon
so has part: feature:1001890-1001974:-1:exon
so has part: feature:1000448-1000527:-1:exon
so has part: feature:1000049-1000148:-1:exon
so has part: feature:999565-999604:-1:exon

XP_015223296.1
type: Protein
SIO_000068: ncbiprotein

position:999565:-1
position: 999565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011241:-1
position: 1011241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1011232-1011241:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1010640-1010676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1010107-1010155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1009741-1009825:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1009229-1009316:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1008962-1009023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1008175-1008253:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1004691-1004725:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1004126-1004155:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1003268-1003377:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1002949-1003078:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1002383-1002466:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1001890-1001974:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1000448-1000527:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1000049-1000148:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:999565-999604:-1:exon

rhbdd2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: rhbdd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1014348..1017443
location: region:1014348-1017443:1
so has part: feature:1014348-1017443:1:exon
subclass of: SO_0000010

107079899
type: Gene
SIO_000068: ncbigene

position:1014348:1
position: 1014348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1017443:1
position: 1017443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1014348-1017443:1:exon

rhbdd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: rhbdd2
product: rhomboid domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015367296.1
SIO_010081: rhbdd2
subclass of: SO_0000673
so part of: rhbdd2
location: join(1014348..1014456,1015240..1015390,1016216..1017443)
location: region:1014348-1017443:1
so has part: feature:1014348-1014456:1:exon
so has part: feature:1015240-1015390:1:exon
so has part: feature:1016216-1017443:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1014348-1014456:1:exon

position:1014456:1
position: 1014456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1015240-1015390:1:exon

position:1015240:1
position: 1015240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015390:1
position: 1015390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1016216-1017443:1:exon