Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG20, LepOcu1, whole genome shotgun sequence.
type: Entry
definition: Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG20, LepOcu1, whole genome shotgun sequence.
sequence version: NC_023198.1
sequence date: 2016-01-08
sequence: sequence
division: CON
label: NC_023198.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA221149
dblink: SAMN00706774
keyword: WGS
keyword: RefSeq
source: Lepisosteus oculatus (spotted gar)
organism: Lepisosteus oculatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM001423.1.\nAssembly name: LepOcu1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Broad Institute on\n2012/01/13. The original whole-genome shotgun project has the\naccession AHAT00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Broad Institute\nAssembly Method :: AllPaths v. R38293\nAssembly Name :: LepOcu1\nGenome Coverage :: 677.5x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Lepisosteus oculatus Annotation\n Release 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 6.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000018
sequence length: 14739584
topology: linear
so has quality: SO_0000987
location: 1..14739584
location: region:1-14739584:1
RO_0002162: 7918

NC_023198
type: RefSeq
SIO_000068: refseq

PRJNA221149
type: BioProject
SIO_000068: bioproject

SAMN00706774
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14739584:1
position: 14739584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-14739584:1:source
so part of: sequence
organism: Lepisosteus oculatus
mol type: genomic DNA
isolate: Spotted Gar 1
sex: female
country: USA: Bayou Chevreuil, St. James Parish, Louisiana
lat lon: 29.91 N 90.80 W
linkage group: LG20

7918
type: Taxonomy
SIO_000068: taxonomy

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 7918
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 3213788..3213887
location: region:3213788-3213887:1
so has part: feature:3213788-3213887:1:region

position:3213788:1
position: 3213788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3213887:1
position: 3213887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3213788-3213887:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 7918
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 3506679..3506778
location: region:3506679-3506778:1
so has part: feature:3506679-3506778:1:region

position:3506679:1
position: 3506679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3506778:1
position: 3506778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3506679-3506778:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 7918
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 3907671..3907770
location: region:3907671-3907770:1
so has part: feature:3907671-3907770:1:region

position:3907671:1
position: 3907671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3907770:1
position: 3907770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3907671-3907770:1:region

LOC107079724
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 16..2541
location: region:16-2541:1
so has part: feature:16-2541:1:exon
subclass of: SO_0000010

107079724
type: Gene
SIO_000068: ncbigene

position:16:1
position: 16
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2541:1
position: 2541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16-2541:1:exon

LOC107079724
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079724
product: uncharacterized LOC107079724
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015365883.1
SIO_010081: LOC107079724
subclass of: SO_0000673
so part of: LOC107079724
location: join(16..861,979..1051,1604..1707,1793..1867,2135..2541)
location: region:16-2541:1
so has part: feature:16-861:1:exon
so has part: feature:979-1051:1:exon
so has part: feature:1604-1707:1:exon
so has part: feature:1793-1867:1:exon
so has part: feature:2135-2541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16-861:1:exon

position:861:1
position: 861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:979-1051:1:exon

position:979:1
position: 979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1051:1
position: 1051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1604-1707:1:exon

position:1604:1
position: 1604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1707:1
position: 1707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1793-1867:1:exon

position:1793:1
position: 1793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1867:1
position: 1867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2135-2541:1:exon

position:2135:1
position: 2135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107079724
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107079724
translation: MCHLLLCVRLHACPPACGSCSVFACLPVICVPASALCSPACLLSASRLLLCVRLSACHLRPGFCSVFACLPVICVPAPALCSPVCLSSASRLLLCVRLPACQLLLVFCSVPQEKNSSHEVTVVLFSRTFYDAKTIEEFPEIHRGSICQDHEGRFYEDFYRVVAQNERREEWTSLLVTIKKLFIQYPVLVRLQGTEDFPRGHNSTAAEGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDNGEDTRAPPKNPSSCPRPSDSQSLAVRSAPGFTVLSISSGLALSWREWRVSR
SIO_010081: LOC107079724
subclass of: SO_0000673
so part of: LOC107079724
location: join(456..861,979..1051,1604..1707,1793..1867,2135..2424)
location: region:456-2424:1
so has part: feature:456-861:1:exon
so has part: feature:979-1051:1:exon
so has part: feature:1604-1707:1:exon
so has part: feature:1793-1867:1:exon
so has part: feature:2135-2424:1:exon

XP_015221369.1
type: Protein
SIO_000068: ncbiprotein

position:456:1
position: 456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2424:1
position: 2424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456-861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:979-1051:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1604-1707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1793-1867:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2135-2424:1:exon

LOC107079701
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2472..40431
location: region:2472-40431:1
so has part: feature:2472-40431:1:exon
subclass of: SO_0000010

107079701
type: Gene
SIO_000068: ncbigene

position:2472:1
position: 2472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40431:1
position: 40431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2472-40431:1:exon

LOC107079701
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079701
product: DEP domain-containing protein 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365840.1
SIO_010081: LOC107079701
subclass of: SO_0000673
so part of: LOC107079701
location: join(2472..2540,33159..33375,33775..33832,34853..35024,36377..36523,37231..37402,38059..38119,38861..38943,39724..40431)
location: region:2472-40431:1
so has part: feature:2472-2540:1:exon
so has part: feature:33159-33375:1:exon
so has part: feature:33775-33832:1:exon
so has part: feature:34853-35024:1:exon
so has part: feature:36377-36523:1:exon
so has part: feature:37231-37402:1:exon
so has part: feature:38059-38119:1:exon
so has part: feature:38861-38943:1:exon
so has part: feature:39724-40431:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2472-2540:1:exon

position:2540:1
position: 2540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33159-33375:1:exon

position:33159:1
position: 33159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33375:1
position: 33375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:33775-33832:1:exon

position:33775:1
position: 33775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33832:1
position: 33832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:34853-35024:1:exon

position:34853:1
position: 34853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35024:1
position: 35024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:36377-36523:1:exon

position:36377:1
position: 36377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36523:1
position: 36523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:37231-37402:1:exon

position:37231:1
position: 37231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37402:1
position: 37402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:38059-38119:1:exon

position:38059:1
position: 38059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38119:1
position: 38119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:38861-38943:1:exon

position:38861:1
position: 38861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38943:1
position: 38943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:39724-40431:1:exon

position:39724:1
position: 39724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107079701
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DEP domain-containing protein 5-like
translation: METAGYSASRKLCFLEGCWSLPGAQPSAWYTAALEDFALFQRKWFEVAFTLEERLHSDIPAFLLPWLPSRPASYASRHSSFSRSFGGRSQAAALLASPTPPADVAFPVIGPAWRGSREVLRRFEFACREQSFRRAAAVRTAWSLLRGGWISPGVTAPPGLLQAGAAAGRRLSTVTLDVDVNNRSQRMEWCSCYYHGSFSLSCAFEIKLHWMAVTAAMLFEMVQGWHRKAASCGFLLVPVLEVPFALPSYLYGDPLRAQLFIPLSTACLLREGSEHIFEGFEPETYWDRMQLLQEAILTRFGFIQDKFSASAFNFPAENKSQYIHVTGTVFLQLPYSKRKFSTGQQRRRRNSTSSSNQSLFGAEERVGYNWAYNTMLTKAWRSGATGDERLAERLLRDFTDFCANKDNRLVAFWESCQEKMNASAP
SIO_010081: LOC107079701
subclass of: SO_0000673
so part of: LOC107079701
location: join(2472..2540,33159..33375,33775..33832,34853..35024,36377..36523,37231..37402,38059..38119,38861..38943,39724..40022)
location: region:2472-40022:1
so has part: feature:2472-2540:1:exon
so has part: feature:33159-33375:1:exon
so has part: feature:33775-33832:1:exon
so has part: feature:34853-35024:1:exon
so has part: feature:36377-36523:1:exon
so has part: feature:37231-37402:1:exon
so has part: feature:38059-38119:1:exon
so has part: feature:38861-38943:1:exon
so has part: feature:39724-40022:1:exon

XP_015221326.1
type: Protein
SIO_000068: ncbiprotein

position:40022:1
position: 40022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2472-2540:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33159-33375:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33775-33832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:34853-35024:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36377-36523:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37231-37402:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:38059-38119:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:38861-38943:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:39724-40022:1:exon

LOC102687515
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102687515
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 75949..104962
location: region:75949-104962:1
so has part: feature:75949-104962:1:exon
subclass of: SO_0000010

102687515
type: Gene
SIO_000068: ncbigene

position:75949:1
position: 75949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104962:1
position: 104962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75949-104962:1:exon

LOC102687515
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102687515
product: sodium/glucose cotransporter 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365841.1
SIO_010081: LOC102687515
subclass of: SO_0000673
so part of: LOC102687515
location: join(75949..76247,87757..87956,88070..88129,88402..88506,89656..89761,93317..93397,93496..93716,94295..94430,98757..98898,99111..99279,103854..104962)
location: region:75949-104962:1
so has part: feature:75949-76247:1:exon
so has part: feature:87757-87956:1:exon
so has part: feature:88070-88129:1:exon
so has part: feature:88402-88506:1:exon
so has part: feature:89656-89761:1:exon
so has part: feature:93317-93397:1:exon
so has part: feature:93496-93716:1:exon
so has part: feature:94295-94430:1:exon
so has part: feature:98757-98898:1:exon
so has part: feature:99111-99279:1:exon
so has part: feature:103854-104962:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:75949-76247:1:exon

position:76247:1
position: 76247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87757-87956:1:exon

position:87757:1
position: 87757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87956:1
position: 87956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88070-88129:1:exon

position:88070:1
position: 88070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88129:1
position: 88129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:88402-88506:1:exon

position:88402:1
position: 88402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88506:1
position: 88506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:89656-89761:1:exon

position:89656:1
position: 89656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89761:1
position: 89761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:93317-93397:1:exon

position:93317:1
position: 93317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93397:1
position: 93397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:93496-93716:1:exon

position:93496:1
position: 93496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93716:1
position: 93716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:94295-94430:1:exon

position:94295:1
position: 94295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94430:1
position: 94430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:98757-98898:1:exon

position:98757:1
position: 98757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98898:1
position: 98898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:99111-99279:1:exon

position:99111:1
position: 99111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99279:1
position: 99279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:103854-104962:1:exon

position:103854:1
position: 103854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102687515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102687515
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/glucose cotransporter 1-like
translation: MARAVYGFQSARAGNGSEGPAIAINNPADISVIVIYFLVVLAVGLWVSPVLGGPGICGVEPVGLQGSAAQVEQTSGDVESEKDAPTVRRGGVRRAARLDLSSEAAPVSFQIGASLFASNIGSGHFVGLAGTGAAAGIAIGGFEWNALVVVVILGWLFVPIYIKAGVVTMPEYLKKRFGGQRIRIYLSVLSLLLYIFTKISADMFSGAIFIQQALNLDIYLAVILLLLITALYTVTGGLAAVIYTDTLQTVIMVVGSFILMGFCFGEVGGYEAFKDKYMKAVPSLISAPGLNISKSCYTPRPDSFHIFRDPVTGDLPWPGLVFGLTVLGTWYWCTDQVIVQRCLSAKNMSHVKAGCILCGYLKLLPMFLMVFPGMTSRILYPGLMLSVMLASLMSSLTSIFNSASTLFTMDIYTKVRRRASERELMIAGRVFILVLIGISIAWIPVVQTAQSGQLFDYIQSITSYLGPPIATVFLLAIFWKRTNEPPVPQGDPSCWRKAYNWFCGFEQSTGPQLSAEEQAELQRKLTDTTEQPLWRNVVNINAIILLTVAVFFHGFFG
SIO_010081: LOC102687515
subclass of: SO_0000673
so part of: LOC102687515
location: join(76013..76247,87757..87956,88070..88129,88402..88506,89656..89761,93317..93397,93496..93716,94295..94430,98757..98898,99111..99279,103854..104072)
location: region:76013-104072:1
so has part: feature:76013-76247:1:exon
so has part: feature:87757-87956:1:exon
so has part: feature:88070-88129:1:exon
so has part: feature:88402-88506:1:exon
so has part: feature:89656-89761:1:exon
so has part: feature:93317-93397:1:exon
so has part: feature:93496-93716:1:exon
so has part: feature:94295-94430:1:exon
so has part: feature:98757-98898:1:exon
so has part: feature:99111-99279:1:exon
so has part: feature:103854-104072:1:exon

XP_015221327.1
type: Protein
SIO_000068: ncbiprotein

position:76013:1
position: 76013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104072:1
position: 104072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76013-76247:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87757-87956:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88070-88129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88402-88506:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89656-89761:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93317-93397:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93496-93716:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94295-94430:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98757-98898:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:99111-99279:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:103854-104072:1:exon

LOC102687721
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102687721
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(136955..169102)
location: region:136955-169102:-1
so has part: feature:136955-169102:-1:exon
subclass of: SO_0000010

102687721
type: Gene
SIO_000068: ncbigene

position:136955:-1
position: 136955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169102:-1
position: 169102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136955-169102:-1:exon

LOC102687721
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102687721
product: serotransferrin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365842.1
SIO_010081: LOC102687721
subclass of: SO_0000673
so part of: LOC102687721
location: complement(join(136955..136989,158184..158360,159941..160246,166351..166527,166633..166732,168549..168712,169003..169102))
location: region:136955-169102:-1
so has part: feature:169003-169102:-1:exon
so has part: feature:168549-168712:-1:exon
so has part: feature:166633-166732:-1:exon
so has part: feature:166351-166527:-1:exon
so has part: feature:159941-160246:-1:exon
so has part: feature:158184-158360:-1:exon
so has part: feature:136955-136989:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169003-169102:-1:exon

position:169003:-1
position: 169003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:168549-168712:-1:exon

position:168549:-1
position: 168549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168712:-1
position: 168712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:166633-166732:-1:exon

position:166633:-1
position: 166633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166732:-1
position: 166732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:166351-166527:-1:exon

position:166351:-1
position: 166351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166527:-1
position: 166527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:159941-160246:-1:exon

position:159941:-1
position: 159941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160246:-1
position: 160246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:158184-158360:-1:exon

position:158184:-1
position: 158184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158360:-1
position: 158360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:136955-136989:-1:exon

position:136989:-1
position: 136989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102687721
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102687721
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serotransferrin-like
translation: MRTALIALILVACSCHTAGKKFRWCCVSDREQRKCADLARALAAVLPAAAVAAFAKLSCILAPSTADCIGKIQANRADAVTLDAGEVYTAAKQFGLIAVAKEMYEDGGCVLAVALVRNSSLSIRSLQGTRSCHSGARWTAGWSLPLGFLLSRNYLPWAEEQPLSQAVELEECVRTPHRQQRRARLSPGPPRCEDGSSRASRSARQVLFGHRGRERRRFQLFESRAYGAADLLFHDATERLQVLPENTEVSRVLGLDYMALLKGLGHEGSSLEDSVVRWCCISAAEQQKCEQWALSIRSDPLVCVRVASMRQCVEKIKARAHTQYPHCRNSNASRQSS
SIO_010081: LOC102687721
subclass of: SO_0000673
so part of: LOC102687721
location: complement(join(136955..136989,158184..158360,159941..160246,166351..166527,166633..166732,168549..168712,169003..169057))
location: region:136955-169057:-1
so has part: feature:169003-169057:-1:exon
so has part: feature:168549-168712:-1:exon
so has part: feature:166633-166732:-1:exon
so has part: feature:166351-166527:-1:exon
so has part: feature:159941-160246:-1:exon
so has part: feature:158184-158360:-1:exon
so has part: feature:136955-136989:-1:exon

XP_015221328.1
type: Protein
SIO_000068: ncbiprotein

position:169057:-1
position: 169057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169003-169057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168549-168712:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166633-166732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166351-166527:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159941-160246:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158184-158360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:136955-136989:-1:exon

pisd
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: pisd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 175898..204095
location: region:175898-204095:1
so has part: feature:175898-204095:1:exon
subclass of: SO_0000010

102698858
type: Gene
SIO_000068: ncbigene

position:175898:1
position: 175898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204095:1
position: 204095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175898-204095:1:exon

pisd
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: pisd
product: phosphatidylserine decarboxylase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_006640096.2
SIO_010081: pisd
subclass of: SO_0000673
so part of: pisd
location: join(175898..176232,192415..192564,197292..197457,197959..198195,200939..201077,201253..201402,201906..202066,203374..204095)
location: region:175898-204095:1
so has part: feature:175898-176232:1:exon
so has part: feature:192415-192564:1:exon
so has part: feature:197292-197457:1:exon
so has part: feature:197959-198195:1:exon
so has part: feature:200939-201077:1:exon
so has part: feature:201253-201402:1:exon
so has part: feature:201906-202066:1:exon
so has part: feature:203374-204095:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:175898-176232:1:exon

position:176232:1
position: 176232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:192415-192564:1:exon

position:192415:1
position: 192415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192564:1
position: 192564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:197292-197457:1:exon

position:197292:1
position: 197292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197457:1
position: 197457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:197959-198195:1:exon

position:197959:1
position: 197959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198195:1
position: 198195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:200939-201077:1:exon

position:200939:1
position: 200939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201077:1
position: 201077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:201253-201402:1:exon

position:201253:1
position: 201253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201402:1
position: 201402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:201906-202066:1:exon

position:201906:1
position: 201906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202066:1
position: 202066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:203374-204095:1:exon

position:203374:1
position: 203374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pisd
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: pisd
product: phosphatidylserine decarboxylase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015365896.1
SIO_010081: pisd
subclass of: SO_0000673
so part of: pisd
location: join(175898..176232,197292..197457,197959..198195,200939..201077,201253..201402,201906..202066,203374..204095)
location: region:175898-204095:1
so has part: feature:175898-176232:1:exon
so has part: feature:197292-197457:1:exon
so has part: feature:197959-198195:1:exon
so has part: feature:200939-201077:1:exon
so has part: feature:201253-201402:1:exon
so has part: feature:201906-202066:1:exon
so has part: feature:203374-204095:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:175898-176232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197292-197457:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197959-198195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200939-201077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201253-201402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201906-202066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203374-204095:1:exon

pisd
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: pisd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylserine decarboxylase proenzyme isoform X2
translation: MKFPFNPYSLDIGPAARGKPGTAQAAACRGAAAGSRAHVKARSVCFLQGGAACTPPRCRWGRACGPCTCSWRRAAGTRGTPSTGATETGGWSSWASRSRRASPTSCRVKVHARRLRPGGGSSQAGERGAPGGGGGEGGGGGGRSEANAAPSHRTRFRLQFPQLALRRRLGQLSCMSRSTLKLRSWPLSFLYYFLPFGALKPLAKVGWRPTSRVALYKSIPTRLLSRAWGRLNQVELPTWLRKPVYSLYIWTFGVDMKEAAVEDLHHYRNLSEFFRRKLKPQARPVCDSHCVISPSDGKILHFGRVKNCEVEQVKGVTYSLETFLGPHTWGDGLPPNRNEEDSSSFQDVLVTKEGNQLYHCVIYLAPGDYHCFHSPTDWRVAHRRHFPGSLMSVNPGVARWIKELFCHNERVVLSGEWTHGFFSLTAVGATNVGSIRIYFDKDLHTNSPRYSKGSFNDFSYVSNNNREGVYMRKGEHLGEFNLGSTIVLLFEAPKDFTFSLKAGQKIRFGEALGTM
SIO_010081: pisd
subclass of: SO_0000673
so part of: pisd
location: join(175913..176232,192415..192564,197292..197457,197959..198195,200939..201077,201253..201402,201906..202066,203374..203598)
location: region:175913-203598:1
so has part: feature:175913-176232:1:exon
so has part: feature:192415-192564:1:exon
so has part: feature:197292-197457:1:exon
so has part: feature:197959-198195:1:exon
so has part: feature:200939-201077:1:exon
so has part: feature:201253-201402:1:exon
so has part: feature:201906-202066:1:exon
so has part: feature:203374-203598:1:exon

XP_006640159.2
type: Protein
SIO_000068: ncbiprotein

position:175913:1
position: 175913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203598:1
position: 203598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175913-176232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192415-192564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197292-197457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197959-198195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200939-201077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201253-201402:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201906-202066:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203374-203598:1:exon

pisd
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: pisd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylserine decarboxylase proenzyme isoform X3
translation: MKFPFNPYSLDIGPAARGKPGTAQAAACRGAAAGSRAHVKARSVCFLQGGAACTPPRCRWGRACGPCTCSWRRAAGTRGTPSTGATETGGWSSWASRSRRASPTSCRLQFPQLALRRRLGQLSCMSRSTLKLRSWPLSFLYYFLPFGALKPLAKVGWRPTSRVALYKSIPTRLLSRAWGRLNQVELPTWLRKPVYSLYIWTFGVDMKEAAVEDLHHYRNLSEFFRRKLKPQARPVCDSHCVISPSDGKILHFGRVKNCEVEQVKGVTYSLETFLGPHTWGDGLPPNRNEEDSSSFQDVLVTKEGNQLYHCVIYLAPGDYHCFHSPTDWRVAHRRHFPGSLMSVNPGVARWIKELFCHNERVVLSGEWTHGFFSLTAVGATNVGSIRIYFDKDLHTNSPRYSKGSFNDFSYVSNNNREGVYMRKGEHLGEFNLGSTIVLLFEAPKDFTFSLKAGQKIRFGEALGTM
SIO_010081: pisd
subclass of: SO_0000673
so part of: pisd
location: join(175913..176232,197292..197457,197959..198195,200939..201077,201253..201402,201906..202066,203374..203598)
location: region:175913-203598:1
so has part: feature:175913-176232:1:exon
so has part: feature:197292-197457:1:exon
so has part: feature:197959-198195:1:exon
so has part: feature:200939-201077:1:exon
so has part: feature:201253-201402:1:exon
so has part: feature:201906-202066:1:exon
so has part: feature:203374-203598:1:exon

XP_015221382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175913-176232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197292-197457:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197959-198195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200939-201077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201253-201402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201906-202066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203374-203598:1:exon

pisd
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: pisd
product: phosphatidylserine decarboxylase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015365898.1
SIO_010081: pisd
subclass of: SO_0000673
so part of: pisd
location: join(185285..185495,192036..192361,197292..197457,197959..198195,200939..201077,201253..201402,201906..202066,203374..204095)
location: region:185285-204095:1
so has part: feature:185285-185495:1:exon
so has part: feature:192036-192361:1:exon
so has part: feature:197292-197457:1:exon
so has part: feature:197959-198195:1:exon
so has part: feature:200939-201077:1:exon
so has part: feature:201253-201402:1:exon
so has part: feature:201906-202066:1:exon
so has part: feature:203374-204095:1:exon

position:185285:1
position: 185285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185285-185495:1:exon

position:185495:1
position: 185495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:192036-192361:1:exon

position:192036:1
position: 192036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192361:1
position: 192361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:197292-197457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197959-198195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200939-201077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201253-201402:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201906-202066:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203374-204095:1:exon

pisd
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: pisd
product: phosphatidylserine decarboxylase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015365897.1
SIO_010081: pisd
subclass of: SO_0000673
so part of: pisd
location: join(185285..185436,192036..192361,197292..197457,197959..198195,200939..201077,201253..201402,201906..202066,203374..204095)
location: region:185285-204095:1
so has part: feature:185285-185436:1:exon
so has part: feature:192036-192361:1:exon
so has part: feature:197292-197457:1:exon
so has part: feature:197959-198195:1:exon
so has part: feature:200939-201077:1:exon
so has part: feature:201253-201402:1:exon
so has part: feature:201906-202066:1:exon
so has part: feature:203374-204095:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:185285-185436:1:exon

position:185436:1
position: 185436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:192036-192361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197292-197457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197959-198195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200939-201077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201253-201402:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201906-202066:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203374-204095:1:exon

pisd
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: pisd
product: phosphatidylserine decarboxylase, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015365899.1
SIO_010081: pisd
subclass of: SO_0000673
so part of: pisd
location: join(185285..185436,192040..192361,197292..197457,197959..198195,200939..201077,201253..201402,201906..202066,203374..204095)
location: region:185285-204095:1
so has part: feature:185285-185436:1:exon
so has part: feature:192040-192361:1:exon
so has part: feature:197292-197457:1:exon
so has part: feature:197959-198195:1:exon
so has part: feature:200939-201077:1:exon
so has part: feature:201253-201402:1:exon
so has part: feature:201906-202066:1:exon
so has part: feature:203374-204095:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:185285-185436:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192040-192361:1:exon

position:192040:1
position: 192040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:197292-197457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197959-198195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200939-201077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201253-201402:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201906-202066:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203374-204095:1:exon

pisd
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: pisd
product: phosphatidylserine decarboxylase, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015365900.1
SIO_010081: pisd
subclass of: SO_0000673
so part of: pisd
location: join(185477..185495,192040..192361,197292..197457,197959..198195,200939..201077,201253..201402,201906..202066,203374..204095)
location: region:185477-204095:1
so has part: feature:185477-185495:1:exon
so has part: feature:192040-192361:1:exon
so has part: feature:197292-197457:1:exon
so has part: feature:197959-198195:1:exon
so has part: feature:200939-201077:1:exon
so has part: feature:201253-201402:1:exon
so has part: feature:201906-202066:1:exon
so has part: feature:203374-204095:1:exon

position:185477:1
position: 185477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185477-185495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192040-192361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197292-197457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197959-198195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200939-201077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201253-201402:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201906-202066:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203374-204095:1:exon

pisd
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: pisd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylserine decarboxylase proenzyme isoform X4
translation: MCQGYLRKAPWSTGKWLQFPQLALRRRLGQLSCMSRSTLKLRSWPLSFLYYFLPFGALKPLAKVGWRPTSRVALYKSIPTRLLSRAWGRLNQVELPTWLRKPVYSLYIWTFGVDMKEAAVEDLHHYRNLSEFFRRKLKPQARPVCDSHCVISPSDGKILHFGRVKNCEVEQVKGVTYSLETFLGPHTWGDGLPPNRNEEDSSSFQDVLVTKEGNQLYHCVIYLAPGDYHCFHSPTDWRVAHRRHFPGSLMSVNPGVARWIKELFCHNERVVLSGEWTHGFFSLTAVGATNVGSIRIYFDKDLHTNSPRYSKGSFNDFSYVSNNNREGVYMRKGEHLGEFNLGSTIVLLFEAPKDFTFSLKAGQKIRFGEALGTM
SIO_010081: pisd
subclass of: SO_0000673
so part of: pisd
location: join(192315..192361,197292..197457,197959..198195,200939..201077,201253..201402,201906..202066,203374..203598)
location: region:192315-203598:1
so has part: feature:192315-192361:1:exon
so has part: feature:197292-197457:1:exon
so has part: feature:197959-198195:1:exon
so has part: feature:200939-201077:1:exon
so has part: feature:201253-201402:1:exon
so has part: feature:201906-202066:1:exon
so has part: feature:203374-203598:1:exon

XP_015221383.1
type: Protein
SIO_000068: ncbiprotein

position:192315:1
position: 192315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192315-192361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197292-197457:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197959-198195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200939-201077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201253-201402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201906-202066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203374-203598:1:exon

pisd
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: pisd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylserine decarboxylase proenzyme isoform X4
translation: MCQGYLRKAPWSTGKWLQFPQLALRRRLGQLSCMSRSTLKLRSWPLSFLYYFLPFGALKPLAKVGWRPTSRVALYKSIPTRLLSRAWGRLNQVELPTWLRKPVYSLYIWTFGVDMKEAAVEDLHHYRNLSEFFRRKLKPQARPVCDSHCVISPSDGKILHFGRVKNCEVEQVKGVTYSLETFLGPHTWGDGLPPNRNEEDSSSFQDVLVTKEGNQLYHCVIYLAPGDYHCFHSPTDWRVAHRRHFPGSLMSVNPGVARWIKELFCHNERVVLSGEWTHGFFSLTAVGATNVGSIRIYFDKDLHTNSPRYSKGSFNDFSYVSNNNREGVYMRKGEHLGEFNLGSTIVLLFEAPKDFTFSLKAGQKIRFGEALGTM
SIO_010081: pisd
subclass of: SO_0000673
so part of: pisd
location: join(192315..192361,197292..197457,197959..198195,200939..201077,201253..201402,201906..202066,203374..203598)
location: region:192315-203598:1
so has part: feature:192315-192361:1:exon
so has part: feature:197292-197457:1:exon
so has part: feature:197959-198195:1:exon
so has part: feature:200939-201077:1:exon
so has part: feature:201253-201402:1:exon
so has part: feature:201906-202066:1:exon
so has part: feature:203374-203598:1:exon

XP_015221384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192315-192361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197292-197457:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197959-198195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200939-201077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201253-201402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201906-202066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203374-203598:1:exon

pisd
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: pisd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylserine decarboxylase proenzyme isoform X4
translation: MCQGYLRKAPWSTGKWLQFPQLALRRRLGQLSCMSRSTLKLRSWPLSFLYYFLPFGALKPLAKVGWRPTSRVALYKSIPTRLLSRAWGRLNQVELPTWLRKPVYSLYIWTFGVDMKEAAVEDLHHYRNLSEFFRRKLKPQARPVCDSHCVISPSDGKILHFGRVKNCEVEQVKGVTYSLETFLGPHTWGDGLPPNRNEEDSSSFQDVLVTKEGNQLYHCVIYLAPGDYHCFHSPTDWRVAHRRHFPGSLMSVNPGVARWIKELFCHNERVVLSGEWTHGFFSLTAVGATNVGSIRIYFDKDLHTNSPRYSKGSFNDFSYVSNNNREGVYMRKGEHLGEFNLGSTIVLLFEAPKDFTFSLKAGQKIRFGEALGTM
SIO_010081: pisd
subclass of: SO_0000673
so part of: pisd
location: join(192315..192361,197292..197457,197959..198195,200939..201077,201253..201402,201906..202066,203374..203598)
location: region:192315-203598:1
so has part: feature:192315-192361:1:exon
so has part: feature:197292-197457:1:exon
so has part: feature:197959-198195:1:exon
so has part: feature:200939-201077:1:exon
so has part: feature:201253-201402:1:exon
so has part: feature:201906-202066:1:exon
so has part: feature:203374-203598:1:exon

XP_015221385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192315-192361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197292-197457:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197959-198195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200939-201077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201253-201402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201906-202066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203374-203598:1:exon

pisd
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: pisd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylserine decarboxylase proenzyme isoform X4
translation: MCQGYLRKAPWSTGKWLQFPQLALRRRLGQLSCMSRSTLKLRSWPLSFLYYFLPFGALKPLAKVGWRPTSRVALYKSIPTRLLSRAWGRLNQVELPTWLRKPVYSLYIWTFGVDMKEAAVEDLHHYRNLSEFFRRKLKPQARPVCDSHCVISPSDGKILHFGRVKNCEVEQVKGVTYSLETFLGPHTWGDGLPPNRNEEDSSSFQDVLVTKEGNQLYHCVIYLAPGDYHCFHSPTDWRVAHRRHFPGSLMSVNPGVARWIKELFCHNERVVLSGEWTHGFFSLTAVGATNVGSIRIYFDKDLHTNSPRYSKGSFNDFSYVSNNNREGVYMRKGEHLGEFNLGSTIVLLFEAPKDFTFSLKAGQKIRFGEALGTM
SIO_010081: pisd
subclass of: SO_0000673
so part of: pisd
location: join(192315..192361,197292..197457,197959..198195,200939..201077,201253..201402,201906..202066,203374..203598)
location: region:192315-203598:1
so has part: feature:192315-192361:1:exon
so has part: feature:197292-197457:1:exon
so has part: feature:197959-198195:1:exon
so has part: feature:200939-201077:1:exon
so has part: feature:201253-201402:1:exon
so has part: feature:201906-202066:1:exon
so has part: feature:203374-203598:1:exon

XP_015221386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192315-192361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197292-197457:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197959-198195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200939-201077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201253-201402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201906-202066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203374-203598:1:exon

pisd
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: pisd
product: phosphatidylserine decarboxylase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_015365895.1
SIO_010081: pisd
subclass of: SO_0000673
so part of: pisd
location: join(192694..193399,197292..197457,197959..198195,200939..201077,201253..201402,201906..202066,203374..204095)
location: region:192694-204095:1
so has part: feature:192694-193399:1:exon
so has part: feature:197292-197457:1:exon
so has part: feature:197959-198195:1:exon
so has part: feature:200939-201077:1:exon
so has part: feature:201253-201402:1:exon
so has part: feature:201906-202066:1:exon
so has part: feature:203374-204095:1:exon

position:192694:1
position: 192694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192694-193399:1:exon

position:193399:1
position: 193399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197292-197457:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197959-198195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200939-201077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201253-201402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201906-202066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203374-204095:1:exon

pisd
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: pisd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylserine decarboxylase proenzyme isoform X1
translation: MAGLRGRGGGGVCVLCVGVCHVQSPLAVVQSPCLACLPCTAPKLSCAVSAVLGSRAQAETGGGRRSSLSALSLPRRAVWGFASRRRKFLHCPFSPSPSRCVCMRKSSGLSAGACDWAQCVCSEEGRGRGRGEAGRQAGRQWGSEADQTQRSWGLGGQTPGACSLQWAKWSAAAVLSPGSFPPDALGSAGTCVTPSVREGGCVLAGWRKLERRGSPGSTALEGSDSRLQFPQLALRRRLGQLSCMSRSTLKLRSWPLSFLYYFLPFGALKPLAKVGWRPTSRVALYKSIPTRLLSRAWGRLNQVELPTWLRKPVYSLYIWTFGVDMKEAAVEDLHHYRNLSEFFRRKLKPQARPVCDSHCVISPSDGKILHFGRVKNCEVEQVKGVTYSLETFLGPHTWGDGLPPNRNEEDSSSFQDVLVTKEGNQLYHCVIYLAPGDYHCFHSPTDWRVAHRRHFPGSLMSVNPGVARWIKELFCHNERVVLSGEWTHGFFSLTAVGATNVGSIRIYFDKDLHTNSPRYSKGSFNDFSYVSNNNREGVYMRKGEHLGEFNLGSTIVLLFEAPKDFTFSLKAGQKIRFGEALGTM
SIO_010081: pisd
subclass of: SO_0000673
so part of: pisd
location: join(192723..193399,197292..197457,197959..198195,200939..201077,201253..201402,201906..202066,203374..203598)
location: region:192723-203598:1
so has part: feature:192723-193399:1:exon
so has part: feature:197292-197457:1:exon
so has part: feature:197959-198195:1:exon
so has part: feature:200939-201077:1:exon
so has part: feature:201253-201402:1:exon
so has part: feature:201906-202066:1:exon
so has part: feature:203374-203598:1:exon

XP_015221381.1
type: Protein
SIO_000068: ncbiprotein

position:192723:1
position: 192723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192723-193399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197292-197457:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197959-198195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200939-201077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201253-201402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201906-202066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203374-203598:1:exon

LOC107079730
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(206629..211739)
location: region:206629-211739:-1
so has part: feature:206629-211739:-1:exon
subclass of: SO_0000010

107079730
type: Gene
SIO_000068: ncbigene

position:206629:-1
position: 206629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211739:-1
position: 211739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206629-211739:-1:exon

LOC107079730
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079730
product: protein SFI1 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015365903.1
SIO_010081: LOC107079730
subclass of: SO_0000673
so part of: LOC107079730
location: complement(join(206629..207036,207140..207245,207862..208015,208418..208571,209182..209419,209720..209815,209898..210151,211019..211195,211286..211739))
location: region:206629-211739:-1
so has part: feature:211286-211739:-1:exon
so has part: feature:211019-211195:-1:exon
so has part: feature:209898-210151:-1:exon
so has part: feature:209720-209815:-1:exon
so has part: feature:209182-209419:-1:exon
so has part: feature:208418-208571:-1:exon
so has part: feature:207862-208015:-1:exon
so has part: feature:207140-207245:-1:exon
so has part: feature:206629-207036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211286-211739:-1:exon

position:211286:-1
position: 211286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:211019-211195:-1:exon

position:211019:-1
position: 211019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211195:-1
position: 211195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:209898-210151:-1:exon

position:209898:-1
position: 209898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210151:-1
position: 210151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:209720-209815:-1:exon

position:209720:-1
position: 209720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209815:-1
position: 209815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:209182-209419:-1:exon

position:209182:-1
position: 209182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209419:-1
position: 209419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:208418-208571:-1:exon

position:208418:-1
position: 208418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208571:-1
position: 208571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:207862-208015:-1:exon

position:207862:-1
position: 207862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208015:-1
position: 208015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:207140-207245:-1:exon

position:207140:-1
position: 207140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207245:-1
position: 207245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:206629-207036:-1:exon

position:207036:-1
position: 207036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107079730
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079730
product: protein SFI1 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015365901.1
SIO_010081: LOC107079730
subclass of: SO_0000673
so part of: LOC107079730
location: complement(join(206629..207036,207140..207245,207862..208021,208418..208571,209182..209419,209720..209815,209898..210151,211019..211195,211286..211739))
location: region:206629-211739:-1
so has part: feature:211286-211739:-1:exon
so has part: feature:211019-211195:-1:exon
so has part: feature:209898-210151:-1:exon
so has part: feature:209720-209815:-1:exon
so has part: feature:209182-209419:-1:exon
so has part: feature:208418-208571:-1:exon
so has part: feature:207862-208021:-1:exon
so has part: feature:207140-207245:-1:exon
so has part: feature:206629-207036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211286-211739:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211019-211195:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209898-210151:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209720-209815:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209182-209419:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:208418-208571:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207862-208021:-1:exon

position:208021:-1
position: 208021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:207140-207245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:206629-207036:-1:exon

LOC107079730
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079730
product: protein SFI1 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015365902.1
SIO_010081: LOC107079730
subclass of: SO_0000673
so part of: LOC107079730
location: complement(join(206629..207036,207140..207245,207862..208018,208418..208571,209182..209419,209720..209815,209898..210151,211019..211195,211286..211737))
location: region:206629-211737:-1
so has part: feature:211286-211737:-1:exon
so has part: feature:211019-211195:-1:exon
so has part: feature:209898-210151:-1:exon
so has part: feature:209720-209815:-1:exon
so has part: feature:209182-209419:-1:exon
so has part: feature:208418-208571:-1:exon
so has part: feature:207862-208018:-1:exon
so has part: feature:207140-207245:-1:exon
so has part: feature:206629-207036:-1:exon

position:211737:-1
position: 211737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211286-211737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211019-211195:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209898-210151:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209720-209815:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209182-209419:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:208418-208571:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207862-208018:-1:exon

position:208018:-1
position: 208018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:207140-207245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:206629-207036:-1:exon

LOC107079730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SFI1 homolog isoform X3
translation: MARFRTALAEQSQTQSALRLQRLVRRCAMLWKRRALSRGRGQRPPPSNPEPRRKAVTFHLPGGEKVGVGLLSDRNRASCGTPALQDGAMPATAGSTPSLLPSVRAPRLQPRRPDYLLPAPGREGPRLPARGSSCALQPLPSPPRSKPSAHQGAQQETRIPPQSAPQPGPPAGLGVWTAPPPEVALCPQEPLLPPSSFMGPQGVKSHTQTAKLPRSREEPAAWYHTPPAALQTGAPHRPHRDPQDLLLFSPAAFAGTRTPRKTASDDDDEEEWGGDQRRQDRGSPKEPLRALLTAELLQIRQEMQRFHDNKLKLKAWRRQAAALGAWLEDSERDGETPDCAGEARQELAELEQKTRALSAQLKEGQPAMVQHAARIREIAGLLPD
SIO_010081: LOC107079730
subclass of: SO_0000673
so part of: LOC107079730
location: complement(join(206929..207036,207140..207245,207862..208015,208418..208571,209182..209419,209720..209815,209898..210151,211019..211063))
location: region:206929-211063:-1
so has part: feature:211019-211063:-1:exon
so has part: feature:209898-210151:-1:exon
so has part: feature:209720-209815:-1:exon
so has part: feature:209182-209419:-1:exon
so has part: feature:208418-208571:-1:exon
so has part: feature:207862-208015:-1:exon
so has part: feature:207140-207245:-1:exon
so has part: feature:206929-207036:-1:exon

XP_015221389.1
type: Protein
SIO_000068: ncbiprotein

position:206929:-1
position: 206929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211063:-1
position: 211063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211019-211063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209898-210151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209720-209815:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209182-209419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:208418-208571:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207862-208015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207140-207245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:206929-207036:-1:exon

LOC107079730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SFI1 homolog isoform X2
translation: MARFRTALAEQSQTQSALRLQRLVRRCAMLWKRRALSRGRGQRPPPSNPEPRRKAVTFHLPGGEKVGVGLLSDRNRASCGTPALQDGAMPATAGSTPSLLPSVRAPRLQPRRPDYLLPAPGREGPRLPARGSSCALQPLPSPPRSKPSAHQGAQQETRIPPQSAPQPGPPAGLGVWTAPPPEVALCPQEPLLPPSSFMGPQGVKSHTQTAKLPRSREEPAAWYHTPPAALQTGAPHRPHRDPQDLLLFSPAAFAGTRTPRKTAASDDDDEEEWGGDQRRQDRGSPKEPLRALLTAELLQIRQEMQRFHDNKLKLKAWRRQAAALGAWLEDSERDGETPDCAGEARQELAELEQKTRALSAQLKEGQPAMVQHAARIREIAGLLPD
SIO_010081: LOC107079730
subclass of: SO_0000673
so part of: LOC107079730
location: complement(join(206929..207036,207140..207245,207862..208018,208418..208571,209182..209419,209720..209815,209898..210151,211019..211063))
location: region:206929-211063:-1
so has part: feature:211019-211063:-1:exon
so has part: feature:209898-210151:-1:exon
so has part: feature:209720-209815:-1:exon
so has part: feature:209182-209419:-1:exon
so has part: feature:208418-208571:-1:exon
so has part: feature:207862-208018:-1:exon
so has part: feature:207140-207245:-1:exon
so has part: feature:206929-207036:-1:exon

XP_015221388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211019-211063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209898-210151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209720-209815:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209182-209419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:208418-208571:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207862-208018:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207140-207245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:206929-207036:-1:exon

LOC107079730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SFI1 homolog isoform X1
translation: MARFRTALAEQSQTQSALRLQRLVRRCAMLWKRRALSRGRGQRPPPSNPEPRRKAVTFHLPGGEKVGVGLLSDRNRASCGTPALQDGAMPATAGSTPSLLPSVRAPRLQPRRPDYLLPAPGREGPRLPARGSSCALQPLPSPPRSKPSAHQGAQQETRIPPQSAPQPGPPAGLGVWTAPPPEVALCPQEPLLPPSSFMGPQGVKSHTQTAKLPRSREEPAAWYHTPPAALQTGAPHRPHRDPQDLLLFSPAAFAGTRTPRKTAAASDDDDEEEWGGDQRRQDRGSPKEPLRALLTAELLQIRQEMQRFHDNKLKLKAWRRQAAALGAWLEDSERDGETPDCAGEARQELAELEQKTRALSAQLKEGQPAMVQHAARIREIAGLLPD
SIO_010081: LOC107079730
subclass of: SO_0000673
so part of: LOC107079730
location: complement(join(206929..207036,207140..207245,207862..208021,208418..208571,209182..209419,209720..209815,209898..210151,211019..211063))
location: region:206929-211063:-1
so has part: feature:211019-211063:-1:exon
so has part: feature:209898-210151:-1:exon
so has part: feature:209720-209815:-1:exon
so has part: feature:209182-209419:-1:exon
so has part: feature:208418-208571:-1:exon
so has part: feature:207862-208021:-1:exon
so has part: feature:207140-207245:-1:exon
so has part: feature:206929-207036:-1:exon

XP_015221387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211019-211063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209898-210151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209720-209815:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209182-209419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:208418-208571:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207862-208021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207140-207245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:206929-207036:-1:exon

LOC102687921
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102687921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(223798..241204)
location: region:223798-241204:-1
so has part: feature:223798-241204:-1:exon
subclass of: SO_0000010

102687921
type: Gene
SIO_000068: ncbigene

position:223798:-1
position: 223798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241204:-1
position: 241204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223798-241204:-1:exon

LOC102687921
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102687921
product: protein SFI1 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015365825.1
SIO_010081: LOC102687921
subclass of: SO_0000673
so part of: LOC102687921
location: complement(join(223798..224032,225095..225190,226275..226350,226443..226621,226712..226793,227014..227144,228212..228278,230285..230382,230472..230564,230760..230830,231502..231663,232014..232170,232325..232427,232822..232939,233059..233153,233315..233425,235200..235271,235858..236001,236802..236939,238877..241204))
location: region:223798-241204:-1
so has part: feature:238877-241204:-1:exon
so has part: feature:236802-236939:-1:exon
so has part: feature:235858-236001:-1:exon
so has part: feature:235200-235271:-1:exon
so has part: feature:233315-233425:-1:exon
so has part: feature:233059-233153:-1:exon
so has part: feature:232822-232939:-1:exon
so has part: feature:232325-232427:-1:exon
so has part: feature:232014-232170:-1:exon
so has part: feature:231502-231663:-1:exon
so has part: feature:230760-230830:-1:exon
so has part: feature:230472-230564:-1:exon
so has part: feature:230285-230382:-1:exon
so has part: feature:228212-228278:-1:exon
so has part: feature:227014-227144:-1:exon
so has part: feature:226712-226793:-1:exon
so has part: feature:226443-226621:-1:exon
so has part: feature:226275-226350:-1:exon
so has part: feature:225095-225190:-1:exon
so has part: feature:223798-224032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238877-241204:-1:exon

position:238877:-1
position: 238877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:236802-236939:-1:exon

position:236802:-1
position: 236802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236939:-1
position: 236939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:235858-236001:-1:exon

position:235858:-1
position: 235858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236001:-1
position: 236001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:235200-235271:-1:exon

position:235200:-1
position: 235200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235271:-1
position: 235271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:233315-233425:-1:exon

position:233315:-1
position: 233315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233425:-1
position: 233425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:233059-233153:-1:exon

position:233059:-1
position: 233059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233153:-1
position: 233153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:232822-232939:-1:exon

position:232822:-1
position: 232822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232939:-1
position: 232939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:232325-232427:-1:exon

position:232325:-1
position: 232325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232427:-1
position: 232427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:232014-232170:-1:exon

position:232014:-1
position: 232014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232170:-1
position: 232170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:231502-231663:-1:exon

position:231502:-1
position: 231502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231663:-1
position: 231663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:230760-230830:-1:exon

position:230760:-1
position: 230760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230830:-1
position: 230830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:230472-230564:-1:exon

position:230472:-1
position: 230472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230564:-1
position: 230564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:230285-230382:-1:exon

position:230285:-1
position: 230285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230382:-1
position: 230382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:228212-228278:-1:exon

position:228212:-1
position: 228212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228278:-1
position: 228278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:227014-227144:-1:exon

position:227014:-1
position: 227014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227144:-1
position: 227144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:226712-226793:-1:exon

position:226712:-1
position: 226712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226793:-1
position: 226793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:226443-226621:-1:exon

position:226443:-1
position: 226443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226621:-1
position: 226621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:226275-226350:-1:exon

position:226275:-1
position: 226275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226350:-1
position: 226350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:225095-225190:-1:exon

position:225095:-1
position: 225095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225190:-1
position: 225190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:223798-224032:-1:exon

position:224032:-1
position: 224032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102687921
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102687921
product: protein SFI1 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015365826.1
SIO_010081: LOC102687921
subclass of: SO_0000673
so part of: LOC102687921
location: complement(join(223798..224032,225095..225190,226275..226350,226443..226621,226712..226793,227014..227144,228212..228278,230285..230382,230472..230564,230760..230830,231502..231663,232014..232170,232325..232427,232822..232939,233059..233153,233315..233425,235200..235271,236802..236939,238811..241204))
location: region:223798-241204:-1
so has part: feature:238811-241204:-1:exon
so has part: feature:236802-236939:-1:exon
so has part: feature:235200-235271:-1:exon
so has part: feature:233315-233425:-1:exon
so has part: feature:233059-233153:-1:exon
so has part: feature:232822-232939:-1:exon
so has part: feature:232325-232427:-1:exon
so has part: feature:232014-232170:-1:exon
so has part: feature:231502-231663:-1:exon
so has part: feature:230760-230830:-1:exon
so has part: feature:230472-230564:-1:exon
so has part: feature:230285-230382:-1:exon
so has part: feature:228212-228278:-1:exon
so has part: feature:227014-227144:-1:exon
so has part: feature:226712-226793:-1:exon
so has part: feature:226443-226621:-1:exon
so has part: feature:226275-226350:-1:exon
so has part: feature:225095-225190:-1:exon
so has part: feature:223798-224032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238811-241204:-1:exon

position:238811:-1
position: 238811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:236802-236939:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235200-235271:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233315-233425:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233059-233153:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232822-232939:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232325-232427:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232014-232170:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231502-231663:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:230760-230830:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:230472-230564:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230285-230382:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:228212-228278:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:227014-227144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:226712-226793:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:226443-226621:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:226275-226350:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:225095-225190:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:223798-224032:-1:exon

LOC102687921
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102687921
product: protein SFI1 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_015365824.1
SIO_010081: LOC102687921
subclass of: SO_0000673
so part of: LOC102687921
location: complement(join(223798..224032,225095..225190,226275..226350,226443..226621,226712..226793,227014..227144,228212..228278,230285..230382,230472..230564,230760..230830,231502..231663,232014..232170,232325..232427,232822..232939,233059..233153,233315..233425,235200..235271,235858..236001,236802..236939,238811..241204))
location: region:223798-241204:-1
so has part: feature:238811-241204:-1:exon
so has part: feature:236802-236939:-1:exon
so has part: feature:235858-236001:-1:exon
so has part: feature:235200-235271:-1:exon
so has part: feature:233315-233425:-1:exon
so has part: feature:233059-233153:-1:exon
so has part: feature:232822-232939:-1:exon
so has part: feature:232325-232427:-1:exon
so has part: feature:232014-232170:-1:exon
so has part: feature:231502-231663:-1:exon
so has part: feature:230760-230830:-1:exon
so has part: feature:230472-230564:-1:exon
so has part: feature:230285-230382:-1:exon
so has part: feature:228212-228278:-1:exon
so has part: feature:227014-227144:-1:exon
so has part: feature:226712-226793:-1:exon
so has part: feature:226443-226621:-1:exon
so has part: feature:226275-226350:-1:exon
so has part: feature:225095-225190:-1:exon
so has part: feature:223798-224032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238811-241204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236802-236939:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235858-236001:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235200-235271:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233315-233425:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233059-233153:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232822-232939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232325-232427:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:232014-232170:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231502-231663:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:230760-230830:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230472-230564:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230285-230382:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:228212-228278:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:227014-227144:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:226712-226793:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:226443-226621:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:226275-226350:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:225095-225190:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:223798-224032:-1:exon

LOC102687921
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102687921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SFI1 homolog isoform X2
translation: MQGGPPRLGSEPRRVRSERGRGRHLARKFLYLWISRTFGRVRPSRARARHSRGVVQRAFAGWREEWWVARREWTLSVRADCHYRLNLYSLVFRGWQQYLLLRRAEKRQFEKAARHDGGRRLRGAWESWQVYVTLRRIKHGMQARAQGLRDHTALRAAWAEWRCQMQRRQGQWEMDACALQHWAQALQIRAWLQWREQYLQAVQQRETESRALLHYHHRLQTAALQAWAAYCQHRRGKRELSGVAVRAWRLSVARSCWCEWRQACQRRRSERDRQESVASLAQRGIARRALTRWRGYVALCAEEAERHRTAEQHYRRQLLRAGLRALSENAARSCLRRVMTNLAAQHRSATVTRRFWRRWRWRCEEEEERRLLPLTLRALAHYRTRLLKKALRCWEEYMRLCRCRQEQERRADQLFSRRALPRCLRTWQEFTAEQRERRERRALAASQLRQCRQGWVFYTWWDRTSRHREERLSGRMAVLHAERAALGRAWALWRQRTAERAEERRGEEAADRLHRRTLGLRALRDWRSNAAVLRALRAGEVLAVRHEYRHCVKRAWGHWRQFVQRRREKAERLAEADGHHQRSLLTHVLRGWKEYHDSLQEVYRTVEHREQQHQHTLLRYSNGPVQPSPAPTGGKSTACSTLIASHFQLSSTALALCISLLQ
SIO_010081: LOC102687921
subclass of: SO_0000673
so part of: LOC102687921
location: complement(join(223823..224032,225095..225190,226275..226350,226443..226621,226712..226793,227014..227144,228212..228278,230285..230382,230472..230564,230760..230830,231502..231663,232014..232170,232325..232427,232822..232939,233059..233153,233315..233425,235200..235271,236802..236869))
location: region:223823-236869:-1
so has part: feature:236802-236869:-1:exon
so has part: feature:235200-235271:-1:exon
so has part: feature:233315-233425:-1:exon
so has part: feature:233059-233153:-1:exon
so has part: feature:232822-232939:-1:exon
so has part: feature:232325-232427:-1:exon
so has part: feature:232014-232170:-1:exon
so has part: feature:231502-231663:-1:exon
so has part: feature:230760-230830:-1:exon
so has part: feature:230472-230564:-1:exon
so has part: feature:230285-230382:-1:exon
so has part: feature:228212-228278:-1:exon
so has part: feature:227014-227144:-1:exon
so has part: feature:226712-226793:-1:exon
so has part: feature:226443-226621:-1:exon
so has part: feature:226275-226350:-1:exon
so has part: feature:225095-225190:-1:exon
so has part: feature:223823-224032:-1:exon

XP_015221312.1
type: Protein
SIO_000068: ncbiprotein

position:223823:-1
position: 223823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236869:-1
position: 236869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236802-236869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235200-235271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:233315-233425:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233059-233153:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232822-232939:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232325-232427:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232014-232170:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:231502-231663:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:230760-230830:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:230472-230564:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:230285-230382:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:228212-228278:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:227014-227144:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:226712-226793:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:226443-226621:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:226275-226350:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:225095-225190:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:223823-224032:-1:exon

LOC102687921
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102687921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SFI1 homolog isoform X1
translation: MQGGPPRLGSEPRRVRSERGRGSGVQAARAQRCPLTGSVLGSARPPGARRVQYRVGYTWNRGGRLKELRIRHLARKFLYLWISRTFGRVRPSRARARHSRGVVQRAFAGWREEWWVARREWTLSVRADCHYRLNLYSLVFRGWQQYLLLRRAEKRQFEKAARHDGGRRLRGAWESWQVYVTLRRIKHGMQARAQGLRDHTALRAAWAEWRCQMQRRQGQWEMDACALQHWAQALQIRAWLQWREQYLQAVQQRETESRALLHYHHRLQTAALQAWAAYCQHRRGKRELSGVAVRAWRLSVARSCWCEWRQACQRRRSERDRQESVASLAQRGIARRALTRWRGYVALCAEEAERHRTAEQHYRRQLLRAGLRALSENAARSCLRRVMTNLAAQHRSATVTRRFWRRWRWRCEEEEERRLLPLTLRALAHYRTRLLKKALRCWEEYMRLCRCRQEQERRADQLFSRRALPRCLRTWQEFTAEQRERRERRALAASQLRQCRQGWVFYTWWDRTSRHREERLSGRMAVLHAERAALGRAWALWRQRTAERAEERRGEEAADRLHRRTLGLRALRDWRSNAAVLRALRAGEVLAVRHEYRHCVKRAWGHWRQFVQRRREKAERLAEADGHHQRSLLTHVLRGWKEYHDSLQEVYRTVEHREQQHQHTLLRYSNGPVQPSPAPTGGKSTACSTLIASHFQLSSTALALCISLLQ
SIO_010081: LOC102687921
subclass of: SO_0000673
so part of: LOC102687921
location: complement(join(223823..224032,225095..225190,226275..226350,226443..226621,226712..226793,227014..227144,228212..228278,230285..230382,230472..230564,230760..230830,231502..231663,232014..232170,232325..232427,232822..232939,233059..233153,233315..233425,235200..235271,235858..236001,236802..236869))
location: region:223823-236869:-1
so has part: feature:236802-236869:-1:exon
so has part: feature:235858-236001:-1:exon
so has part: feature:235200-235271:-1:exon
so has part: feature:233315-233425:-1:exon
so has part: feature:233059-233153:-1:exon
so has part: feature:232822-232939:-1:exon
so has part: feature:232325-232427:-1:exon
so has part: feature:232014-232170:-1:exon
so has part: feature:231502-231663:-1:exon
so has part: feature:230760-230830:-1:exon
so has part: feature:230472-230564:-1:exon
so has part: feature:230285-230382:-1:exon
so has part: feature:228212-228278:-1:exon
so has part: feature:227014-227144:-1:exon
so has part: feature:226712-226793:-1:exon
so has part: feature:226443-226621:-1:exon
so has part: feature:226275-226350:-1:exon
so has part: feature:225095-225190:-1:exon
so has part: feature:223823-224032:-1:exon

XP_015221310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236802-236869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235858-236001:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235200-235271:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233315-233425:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233059-233153:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232822-232939:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232325-232427:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232014-232170:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231502-231663:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:230760-230830:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:230472-230564:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230285-230382:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:228212-228278:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:227014-227144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:226712-226793:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:226443-226621:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:226275-226350:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:225095-225190:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:223823-224032:-1:exon

LOC102687921
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102687921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SFI1 homolog isoform X1
translation: MQGGPPRLGSEPRRVRSERGRGSGVQAARAQRCPLTGSVLGSARPPGARRVQYRVGYTWNRGGRLKELRIRHLARKFLYLWISRTFGRVRPSRARARHSRGVVQRAFAGWREEWWVARREWTLSVRADCHYRLNLYSLVFRGWQQYLLLRRAEKRQFEKAARHDGGRRLRGAWESWQVYVTLRRIKHGMQARAQGLRDHTALRAAWAEWRCQMQRRQGQWEMDACALQHWAQALQIRAWLQWREQYLQAVQQRETESRALLHYHHRLQTAALQAWAAYCQHRRGKRELSGVAVRAWRLSVARSCWCEWRQACQRRRSERDRQESVASLAQRGIARRALTRWRGYVALCAEEAERHRTAEQHYRRQLLRAGLRALSENAARSCLRRVMTNLAAQHRSATVTRRFWRRWRWRCEEEEERRLLPLTLRALAHYRTRLLKKALRCWEEYMRLCRCRQEQERRADQLFSRRALPRCLRTWQEFTAEQRERRERRALAASQLRQCRQGWVFYTWWDRTSRHREERLSGRMAVLHAERAALGRAWALWRQRTAERAEERRGEEAADRLHRRTLGLRALRDWRSNAAVLRALRAGEVLAVRHEYRHCVKRAWGHWRQFVQRRREKAERLAEADGHHQRSLLTHVLRGWKEYHDSLQEVYRTVEHREQQHQHTLLRYSNGPVQPSPAPTGGKSTACSTLIASHFQLSSTALALCISLLQ
SIO_010081: LOC102687921
subclass of: SO_0000673
so part of: LOC102687921
location: complement(join(223823..224032,225095..225190,226275..226350,226443..226621,226712..226793,227014..227144,228212..228278,230285..230382,230472..230564,230760..230830,231502..231663,232014..232170,232325..232427,232822..232939,233059..233153,233315..233425,235200..235271,235858..236001,236802..236869))
location: region:223823-236869:-1
so has part: feature:236802-236869:-1:exon
so has part: feature:235858-236001:-1:exon
so has part: feature:235200-235271:-1:exon
so has part: feature:233315-233425:-1:exon
so has part: feature:233059-233153:-1:exon
so has part: feature:232822-232939:-1:exon
so has part: feature:232325-232427:-1:exon
so has part: feature:232014-232170:-1:exon
so has part: feature:231502-231663:-1:exon
so has part: feature:230760-230830:-1:exon
so has part: feature:230472-230564:-1:exon
so has part: feature:230285-230382:-1:exon
so has part: feature:228212-228278:-1:exon
so has part: feature:227014-227144:-1:exon
so has part: feature:226712-226793:-1:exon
so has part: feature:226443-226621:-1:exon
so has part: feature:226275-226350:-1:exon
so has part: feature:225095-225190:-1:exon
so has part: feature:223823-224032:-1:exon

XP_015221311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236802-236869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235858-236001:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235200-235271:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233315-233425:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233059-233153:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232822-232939:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232325-232427:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232014-232170:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231502-231663:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:230760-230830:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:230472-230564:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230285-230382:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:228212-228278:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:227014-227144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:226712-226793:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:226443-226621:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:226275-226350:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:225095-225190:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:223823-224032:-1:exon

LOC102687921
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7918
gene: LOC102687921
product: protein SFI1 homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_001480631.1
SIO_010081: LOC102687921
so part of: LOC102687921
location: complement(join(225104..225190,226275..226350,226443..226621,226712..226793,227014..227160,228212..228278,230285..230382,230472..230564,230760..230830,231502..231663,232014..232170,232325..232427,232822..232939,233059..233153,233315..233425,235200..235271,235858..236001,236802..236939,238811..241204))
location: region:225104-241204:-1
so has part: feature:238811-241204:-1:exon
so has part: feature:236802-236939:-1:exon
so has part: feature:235858-236001:-1:exon
so has part: feature:235200-235271:-1:exon
so has part: feature:233315-233425:-1:exon
so has part: feature:233059-233153:-1:exon
so has part: feature:232822-232939:-1:exon
so has part: feature:232325-232427:-1:exon
so has part: feature:232014-232170:-1:exon
so has part: feature:231502-231663:-1:exon
so has part: feature:230760-230830:-1:exon
so has part: feature:230472-230564:-1:exon
so has part: feature:230285-230382:-1:exon
so has part: feature:228212-228278:-1:exon
so has part: feature:227014-227160:-1:exon
so has part: feature:226712-226793:-1:exon
so has part: feature:226443-226621:-1:exon
so has part: feature:226275-226350:-1:exon
so has part: feature:225104-225190:-1:exon

position:225104:-1
position: 225104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238811-241204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236802-236939:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235858-236001:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235200-235271:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233315-233425:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233059-233153:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232822-232939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232325-232427:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:232014-232170:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231502-231663:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:230760-230830:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230472-230564:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230285-230382:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:228212-228278:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:227014-227160:-1:exon

position:227160:-1
position: 227160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:226712-226793:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:226443-226621:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:226275-226350:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:225104-225190:-1:exon

eif4enif1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: eif4enif1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 242743..260113
location: region:242743-260113:1
so has part: feature:242743-260113:1:exon
subclass of: SO_0000010

102688126
type: Gene
SIO_000068: ncbigene

position:242743:1
position: 242743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260113:1
position: 260113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242743-260113:1:exon

eif4enif1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: eif4enif1
product: eukaryotic translation initiation factor 4E nuclear import factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365843.1
SIO_010081: eif4enif1
subclass of: SO_0000673
so part of: eif4enif1
location: join(242743..242840,243095..243225,243339..243610,244343..244541,246598..246767,248902..249040,249318..249497,250005..250255,251286..251348,251653..251800,252060..252142,252433..252572,253193..253334,260012..260113)
location: region:242743-260113:1
so has part: feature:242743-242840:1:exon
so has part: feature:243095-243225:1:exon
so has part: feature:243339-243610:1:exon
so has part: feature:244343-244541:1:exon
so has part: feature:246598-246767:1:exon
so has part: feature:248902-249040:1:exon
so has part: feature:249318-249497:1:exon
so has part: feature:250005-250255:1:exon
so has part: feature:251286-251348:1:exon
so has part: feature:251653-251800:1:exon
so has part: feature:252060-252142:1:exon
so has part: feature:252433-252572:1:exon
so has part: feature:253193-253334:1:exon
so has part: feature:260012-260113:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:242743-242840:1:exon

position:242840:1
position: 242840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:243095-243225:1:exon

position:243095:1
position: 243095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243225:1
position: 243225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:243339-243610:1:exon

position:243339:1
position: 243339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243610:1
position: 243610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:244343-244541:1:exon

position:244343:1
position: 244343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244541:1
position: 244541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:246598-246767:1:exon

position:246598:1
position: 246598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246767:1
position: 246767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:248902-249040:1:exon

position:248902:1
position: 248902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249040:1
position: 249040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:249318-249497:1:exon

position:249318:1
position: 249318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249497:1
position: 249497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:250005-250255:1:exon

position:250005:1
position: 250005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250255:1
position: 250255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:251286-251348:1:exon

position:251286:1
position: 251286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251348:1
position: 251348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:251653-251800:1:exon

position:251653:1
position: 251653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251800:1
position: 251800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:252060-252142:1:exon

position:252060:1
position: 252060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252142:1
position: 252142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:252433-252572:1:exon

position:252433:1
position: 252433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252572:1
position: 252572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:253193-253334:1:exon

position:253193:1
position: 253193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253334:1
position: 253334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:260012-260113:1:exon

position:260012:1
position: 260012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

eif4enif1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: eif4enif1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 4E transporter
translation: MKEYPCSNERPECLLEKYDSDGVWDPEKWHASLYPSSERSSPVEGYRKDYPGDDRVPLKRRMADPRDRLKEEDLDVVLSPQRRSFGGGCQGTAALGPQARRAVSPLENKENESLRLGAARRIGSGRIMAARGFEREARGEKEARERDFKDKRFRRDFGDKRVFSERRRNDSYTEEEPEWFSAGPTSQSETIELIGFDDKVLEEEKRRSKRSRKRSESVKEAVECNGGLAEEPEAEVCVDLAADQEVPRRVVLAEPGPGDFDFNEFFDPENTVPGLASMIEDVLGERPVLASRFSRWFSSNVSPSGSRSSSLRSTPHEELERLAGLEQRCISPSLAHYFAPIQSAEEKKEKDKVDILELLQKARIDLKPLLSSLSANKERLRESSHSGVVLSLEEVEVGLKGLKVEGERPGAGTPFMAEHLEEALAGGTSSGPRPGPARPKDGDMSAFNKLVSTMKASGTLPTQPKANQTLDSQFVPSTELPPQKNILQEILGPQVPPPPGSPSLLGGLLGQRGPSPPLFRPGAPSPDYFPLRVQPPAGFPAGAQPLLADSFPEVHRPLSPRAPQQMSSLGLDQATLEALAYQQDLALQARQLYQQGFGKLPQDKCRESYRSRQPRMTRSPGPGVHRASSSSPGSTVTSMVSLMLTGGAKGPQGQNKTLPAAAGGLAAQRQRSGSGERVPSSSPLLESEQTRA
SIO_010081: eif4enif1
subclass of: SO_0000673
so part of: eif4enif1
location: join(242782..242840,243095..243225,243339..243610,244343..244541,246598..246767,248902..249040,249318..249497,250005..250255,251286..251348,251653..251800,252060..252142,252433..252572,253193..253334,260012..260113)
location: region:242782-260113:1
so has part: feature:242782-242840:1:exon
so has part: feature:243095-243225:1:exon
so has part: feature:243339-243610:1:exon
so has part: feature:244343-244541:1:exon
so has part: feature:246598-246767:1:exon
so has part: feature:248902-249040:1:exon
so has part: feature:249318-249497:1:exon
so has part: feature:250005-250255:1:exon
so has part: feature:251286-251348:1:exon
so has part: feature:251653-251800:1:exon
so has part: feature:252060-252142:1:exon
so has part: feature:252433-252572:1:exon
so has part: feature:253193-253334:1:exon
so has part: feature:260012-260113:1:exon

XP_015221329.1
type: Protein
SIO_000068: ncbiprotein

position:242782:1
position: 242782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242782-242840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243095-243225:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243339-243610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244343-244541:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:246598-246767:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:248902-249040:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:249318-249497:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:250005-250255:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:251286-251348:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251653-251800:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:252060-252142:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:252433-252572:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:253193-253334:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:260012-260113:1:exon

patz1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: patz1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <280886..281701
location: region:280886-281701:1
so has part: feature:280886-281701:1:exon
subclass of: SO_0000010

102688330
type: Gene
SIO_000068: ncbigene

position:280886:1
position: 280886
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:281701:1
position: 281701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280886-281701:1:exon

patz1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: patz1
product: POZ (BTB) and AT hook containing zinc finger 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365844.1
SIO_010081: patz1
subclass of: SO_0000673
so part of: patz1
location: <280886..281701
location: region:280886-281701:1
so has part: feature:280886-281701:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280886-281701:1:exon

patz1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: patz1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POZ-, AT hook-, and zinc finger-containing protein 1
translation: PPPPPLSAPSPDGQEEVTKCPHQDSQESSDASFGELSDGGDLKQHKAEEEGLGFGCGGGPGAGGGAPKLRPDGDKKHTCTECGHAFRSKSYLSKHMQKAHVGPQKGLVGAPGPLGDLAPALSSPFSPQQNMSLLESFGFQIVQSAFASSLADPEAGHSGLGLGGK
SIO_010081: patz1
subclass of: SO_0000673
so part of: patz1
location: <280886..281383
location: region:280886-281383:1
so has part: feature:280886-281383:1:exon

XP_015221330.1
type: Protein
SIO_000068: ncbiprotein

position:281383:1
position: 281383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280886-281383:1:exon

LOC107079700
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(290886..295687)
location: region:290886-295687:-1
so has part: feature:290886-295687:-1:exon
subclass of: SO_0000010

107079700
type: Gene
SIO_000068: ncbigene

position:290886:-1
position: 290886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295687:-1
position: 295687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290886-295687:-1:exon

LOC107079700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079700
product: natural cytotoxicity triggering receptor 3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015365838.1
SIO_010081: LOC107079700
subclass of: SO_0000673
so part of: LOC107079700
location: complement(join(290886..291110,291382..291520,292091..292234,292344..292381,292894..293004,293163..293483,294449..295684))
location: region:290886-295684:-1
so has part: feature:294449-295684:-1:exon
so has part: feature:293163-293483:-1:exon
so has part: feature:292894-293004:-1:exon
so has part: feature:292344-292381:-1:exon
so has part: feature:292091-292234:-1:exon
so has part: feature:291382-291520:-1:exon
so has part: feature:290886-291110:-1:exon

position:295684:-1
position: 295684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294449-295684:-1:exon

position:294449:-1
position: 294449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:293163-293483:-1:exon

position:293163:-1
position: 293163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293483:-1
position: 293483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:292894-293004:-1:exon

position:292894:-1
position: 292894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293004:-1
position: 293004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:292344-292381:-1:exon

position:292344:-1
position: 292344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292381:-1
position: 292381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:292091-292234:-1:exon

position:292091:-1
position: 292091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292234:-1
position: 292234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:291382-291520:-1:exon

position:291382:-1
position: 291382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291520:-1
position: 291520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:290886-291110:-1:exon

position:291110:-1
position: 291110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107079700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079700
product: natural cytotoxicity triggering receptor 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015365837.1
SIO_010081: LOC107079700
subclass of: SO_0000673
so part of: LOC107079700
location: complement(join(291138..291381,291494..291520,292091..292231,292344..292381,292894..293004,293163..293483,294449..295687))
location: region:291138-295687:-1
so has part: feature:294449-295687:-1:exon
so has part: feature:293163-293483:-1:exon
so has part: feature:292894-293004:-1:exon
so has part: feature:292344-292381:-1:exon
so has part: feature:292091-292231:-1:exon
so has part: feature:291494-291520:-1:exon
so has part: feature:291138-291381:-1:exon

position:291138:-1
position: 291138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294449-295687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293163-293483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:292894-293004:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:292344-292381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292091-292231:-1:exon

position:292231:-1
position: 292231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:291494-291520:-1:exon

position:291494:-1
position: 291494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:291138-291381:-1:exon

position:291381:-1
position: 291381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107079700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079700
product: natural cytotoxicity triggering receptor 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015365836.1
SIO_010081: LOC107079700
subclass of: SO_0000673
so part of: LOC107079700
location: complement(join(291138..291381,291494..291520,292091..292234,292344..292381,292894..293004,293163..293483,294449..295686))
location: region:291138-295686:-1
so has part: feature:294449-295686:-1:exon
so has part: feature:293163-293483:-1:exon
so has part: feature:292894-293004:-1:exon
so has part: feature:292344-292381:-1:exon
so has part: feature:292091-292234:-1:exon
so has part: feature:291494-291520:-1:exon
so has part: feature:291138-291381:-1:exon

position:295686:-1
position: 295686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294449-295686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293163-293483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:292894-293004:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:292344-292381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292091-292234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291494-291520:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291138-291381:-1:exon

LOC107079700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: natural cytotoxicity triggering receptor 3-like isoform X2
translation: MAALLRLLVIVQAARASGQRLLGVRQWPESLRAEEGGEAAISCSFNGTGLETVSVEWYRNPTASEAPPEKRYTRQNVTGQGTVAVLTLRALRPNDSGVYACKITPLIPVQLEGAWGNGTRLTVSGASGSRLVAALPWALVPALVLLAAAAALCCSRARRDTGNNIYTEADRGPPARASREPEPEPELEDFGYSVLRFPAGPSSRGTCAAARGGGEPAAARQARAGERHEEVRRRQEDRERRKKRSQKEGPRERLAHTPRRVASSRKRLDCLYISHQPL
SIO_010081: LOC107079700
subclass of: SO_0000673
so part of: LOC107079700
location: complement(join(291235..291381,291494..291520,292091..292231,292344..292381,292894..293004,293163..293483,294449..294500))
location: region:291235-294500:-1
so has part: feature:294449-294500:-1:exon
so has part: feature:293163-293483:-1:exon
so has part: feature:292894-293004:-1:exon
so has part: feature:292344-292381:-1:exon
so has part: feature:292091-292231:-1:exon
so has part: feature:291494-291520:-1:exon
so has part: feature:291235-291381:-1:exon

XP_015221323.1
type: Protein
SIO_000068: ncbiprotein

position:291235:-1
position: 291235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294500:-1
position: 294500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294449-294500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293163-293483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:292894-293004:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:292344-292381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292091-292231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291494-291520:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291235-291381:-1:exon

LOC107079700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: natural cytotoxicity triggering receptor 3-like isoform X1
translation: MAALLRLLVIVQAARASGQRLLGVRQWPESLRAEEGGEAAISCSFNGTGLETVSVEWYRNPTASEAPPEKRYTRQNVTGQGTVAVLTLRALRPNDSGVYACKITPLIPVQLEGAWGNGTRLTVSGASGSRLVAALPWALVPALVLLAAAAALCCSRARRDTGNNIYTEADRGPPQARASREPEPEPELEDFGYSVLRFPAGPSSRGTCAAARGGGEPAAARQARAGERHEEVRRRQEDRERRKKRSQKEGPRERLAHTPRRVASSRKRLDCLYISHQPL
SIO_010081: LOC107079700
subclass of: SO_0000673
so part of: LOC107079700
location: complement(join(291235..291381,291494..291520,292091..292234,292344..292381,292894..293004,293163..293483,294449..294500))
location: region:291235-294500:-1
so has part: feature:294449-294500:-1:exon
so has part: feature:293163-293483:-1:exon
so has part: feature:292894-293004:-1:exon
so has part: feature:292344-292381:-1:exon
so has part: feature:292091-292234:-1:exon
so has part: feature:291494-291520:-1:exon
so has part: feature:291235-291381:-1:exon

XP_015221322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294449-294500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293163-293483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:292894-293004:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:292344-292381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292091-292234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291494-291520:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291235-291381:-1:exon

LOC107079700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: natural cytotoxicity triggering receptor 3-like isoform X3
translation: MAALLRLLVIVQAARASGQRLLGVRQWPESLRAEEGGEAAISCSFNGTGLETVSVEWYRNPTASEAPPEKRYTRQNVTGQGTVAVLTLRALRPNDSGVYACKITPLIPVQLEGAWGNGTRLTVSGASGSRLVAALPWALVPALVLLAAAAALCCSRARRDTGNNIYTEADRGPPQARASREPEPEPELEDFGYSVLRFPAGPSSRGTCAAARGGGEPAAARQARAGERHEEVVYSLCGPQRS
SIO_010081: LOC107079700
subclass of: SO_0000673
so part of: LOC107079700
location: complement(join(291458..291520,292091..292234,292344..292381,292894..293004,293163..293483,294449..294500))
location: region:291458-294500:-1
so has part: feature:294449-294500:-1:exon
so has part: feature:293163-293483:-1:exon
so has part: feature:292894-293004:-1:exon
so has part: feature:292344-292381:-1:exon
so has part: feature:292091-292234:-1:exon
so has part: feature:291458-291520:-1:exon

XP_015221324.1
type: Protein
SIO_000068: ncbiprotein

position:291458:-1
position: 291458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294449-294500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293163-293483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:292894-293004:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:292344-292381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292091-292234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291458-291520:-1:exon

tmem233
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: tmem233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 296558..305213
location: region:296558-305213:1
so has part: feature:296558-305213:1:exon
subclass of: SO_0000010

102688537
type: Gene
SIO_000068: ncbigene

position:296558:1
position: 296558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305213:1
position: 305213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296558-305213:1:exon

tmem233
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: tmem233
product: transmembrane protein 233, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015365828.1
SIO_010081: tmem233
subclass of: SO_0000673
so part of: tmem233
location: join(296558..296887,301786..301920,303824..305213)
location: region:296558-305213:1
so has part: feature:296558-296887:1:exon
so has part: feature:301786-301920:1:exon
so has part: feature:303824-305213:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296558-296887:1:exon

position:296887:1
position: 296887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301786-301920:1:exon

position:301786:1
position: 301786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301920:1
position: 301920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:303824-305213:1:exon

position:303824:1
position: 303824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmem233
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: tmem233
product: transmembrane protein 233, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_015365827.1
SIO_010081: tmem233
subclass of: SO_0000673
so part of: tmem233
location: join(296559..296887,301786..301920,303053..305213)
location: region:296559-305213:1
so has part: feature:296559-296887:1:exon
so has part: feature:301786-301920:1:exon
so has part: feature:303053-305213:1:exon

position:296559:1
position: 296559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296559-296887:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301786-301920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:303053-305213:1:exon

position:303053:1
position: 303053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmem233
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: tmem233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 233 isoform X2
translation: MSVPAANSGAKSPLDAEQGAEREAPEVHPPRNYLFLTIFTCFCPAYPVNIVALVFSVMSVNSYNQGDIEGSERLGRNALYVAIASIIIGLLVIAIYCTVHFTTIQF
SIO_010081: tmem233
subclass of: SO_0000673
so part of: tmem233
location: join(296714..296887,301786..301920,303824..303835)
location: region:296714-303835:1
so has part: feature:296714-296887:1:exon
so has part: feature:301786-301920:1:exon
so has part: feature:303824-303835:1:exon

XP_015221314.1
type: Protein
SIO_000068: ncbiprotein

position:296714:1
position: 296714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303835:1
position: 303835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296714-296887:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301786-301920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:303824-303835:1:exon

tmem233
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: tmem233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 233 isoform X1
translation: MSVPAANSGAKSPLDAEQGAEREAPEVHPPRNYLFLTIFTCFCPAYPVNIVALVFSVMSVNSYNQGDIEGSERLGRNALYVAIASIIIGLLVIAIYCTVHFTTHVI
SIO_010081: tmem233
subclass of: SO_0000673
so part of: tmem233
location: join(296714..296887,301786..301920,303053..303064)
location: region:296714-303064:1
so has part: feature:296714-296887:1:exon
so has part: feature:301786-301920:1:exon
so has part: feature:303053-303064:1:exon

XP_015221313.1
type: Protein
SIO_000068: ncbiprotein

position:303064:1
position: 303064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296714-296887:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301786-301920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:303053-303064:1:exon

prkab1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: prkab1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 308544..320170
location: region:308544-320170:1
so has part: feature:308544-320170:1:exon
subclass of: SO_0000010

102688739
type: Gene
SIO_000068: ncbigene

position:308544:1
position: 308544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320170:1
position: 320170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308544-320170:1:exon

prkab1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: prkab1
product: protein kinase, AMP-activated, beta 1 non-catalytic subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365845.1
SIO_010081: prkab1
subclass of: SO_0000673
so part of: prkab1
location: join(308544..308815,313262..313443,313768..313937,314859..314952,315073..315223,317608..317655,317785..320170)
location: region:308544-320170:1
so has part: feature:308544-308815:1:exon
so has part: feature:313262-313443:1:exon
so has part: feature:313768-313937:1:exon
so has part: feature:314859-314952:1:exon
so has part: feature:315073-315223:1:exon
so has part: feature:317608-317655:1:exon
so has part: feature:317785-320170:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:308544-308815:1:exon

position:308815:1
position: 308815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:313262-313443:1:exon

position:313262:1
position: 313262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313443:1
position: 313443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:313768-313937:1:exon

position:313768:1
position: 313768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313937:1
position: 313937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:314859-314952:1:exon

position:314859:1
position: 314859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314952:1
position: 314952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:315073-315223:1:exon

position:315073:1
position: 315073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315223:1
position: 315223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:317608-317655:1:exon

position:317608:1
position: 317608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317655:1
position: 317655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:317785-320170:1:exon

position:317785:1
position: 317785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

prkab1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: prkab1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-AMP-activated protein kinase subunit beta-1
translation: MGNTSSERAGLERQGEKGHRRGTKDGERPKILMDSPEDADIFHGEDMKAPLEKEEFLAWRQDLEVSDKAPTQARPTVFRWTGAGKDVFVSGSFNNWVSKIPLTRSQNNFVAIVDLPEGEHQYKFYVDGQWTHDPSEPVVTNQLGTVNNLIQVKKTDFEVFDALLVDSLKSSDVSGEAACAAPHTAPWKGCTCIPAHLYALSIKDGVMVLSATHRYKKKFVTTLLYKPI
SIO_010081: prkab1
subclass of: SO_0000673
so part of: prkab1
location: join(313300..313443,313768..313937,314859..314952,315073..315223,317608..317655,317785..317864)
location: region:313300-317864:1
so has part: feature:313300-313443:1:exon
so has part: feature:313768-313937:1:exon
so has part: feature:314859-314952:1:exon
so has part: feature:315073-315223:1:exon
so has part: feature:317608-317655:1:exon
so has part: feature:317785-317864:1:exon

XP_015221331.1
type: Protein
SIO_000068: ncbiprotein

position:313300:1
position: 313300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317864:1
position: 317864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313300-313443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313768-313937:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314859-314952:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:315073-315223:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:317608-317655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:317785-317864:1:exon

cit
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: cit
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(320878..391721)
location: region:320878-391721:-1
so has part: feature:320878-391721:-1:exon
subclass of: SO_0000010

102688934
type: Gene
SIO_000068: ncbigene

position:320878:-1
position: 320878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391721:-1
position: 391721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320878-391721:-1:exon

cit
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cit
product: citron rho-interacting serine/threonine kinase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365846.1
SIO_010081: cit
subclass of: SO_0000673
so part of: cit
location: complement(join(320878..322135,322394..322685,324983..325061,325395..325475,325634..325762,325935..326043,326854..326946,327204..327343,329098..329308,333059..333228,335689..335793,336576..336667,336864..337044,337690..337827,339947..340114,340782..340944,341350..341457,343689..343829,348177..348267,348619..348812,351372..351951,352324..352394,357803..357919,358054..358149,358425..358550,358763..358903,359131..359184,359648..359701,359917..360087,364676..364795,366273..366416,368210..368315,377411..377594,381544..381697,382616..382819,383200..383293,384325..384467,389719..389820,390769..390944,391588..391721))
location: region:320878-391721:-1
so has part: feature:391588-391721:-1:exon
so has part: feature:390769-390944:-1:exon
so has part: feature:389719-389820:-1:exon
so has part: feature:384325-384467:-1:exon
so has part: feature:383200-383293:-1:exon
so has part: feature:382616-382819:-1:exon
so has part: feature:381544-381697:-1:exon
so has part: feature:377411-377594:-1:exon
so has part: feature:368210-368315:-1:exon
so has part: feature:366273-366416:-1:exon
so has part: feature:364676-364795:-1:exon
so has part: feature:359917-360087:-1:exon
so has part: feature:359648-359701:-1:exon
so has part: feature:359131-359184:-1:exon
so has part: feature:358763-358903:-1:exon
so has part: feature:358425-358550:-1:exon
so has part: feature:358054-358149:-1:exon
so has part: feature:357803-357919:-1:exon
so has part: feature:352324-352394:-1:exon
so has part: feature:351372-351951:-1:exon
so has part: feature:348619-348812:-1:exon
so has part: feature:348177-348267:-1:exon
so has part: feature:343689-343829:-1:exon
so has part: feature:341350-341457:-1:exon
so has part: feature:340782-340944:-1:exon
so has part: feature:339947-340114:-1:exon
so has part: feature:337690-337827:-1:exon
so has part: feature:336864-337044:-1:exon
so has part: feature:336576-336667:-1:exon
so has part: feature:335689-335793:-1:exon
so has part: feature:333059-333228:-1:exon
so has part: feature:329098-329308:-1:exon
so has part: feature:327204-327343:-1:exon
so has part: feature:326854-326946:-1:exon
so has part: feature:325935-326043:-1:exon
so has part: feature:325634-325762:-1:exon
so has part: feature:325395-325475:-1:exon
so has part: feature:324983-325061:-1:exon
so has part: feature:322394-322685:-1:exon
so has part: feature:320878-322135:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391588-391721:-1:exon

position:391588:-1
position: 391588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:390769-390944:-1:exon

position:390769:-1
position: 390769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390944:-1
position: 390944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:389719-389820:-1:exon

position:389719:-1
position: 389719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389820:-1
position: 389820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:384325-384467:-1:exon

position:384325:-1
position: 384325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384467:-1
position: 384467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:383200-383293:-1:exon

position:383200:-1
position: 383200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383293:-1
position: 383293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:382616-382819:-1:exon

position:382616:-1
position: 382616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382819:-1
position: 382819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:381544-381697:-1:exon

position:381544:-1
position: 381544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381697:-1
position: 381697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:377411-377594:-1:exon

position:377411:-1
position: 377411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377594:-1
position: 377594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:368210-368315:-1:exon

position:368210:-1
position: 368210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368315:-1
position: 368315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:366273-366416:-1:exon

position:366273:-1
position: 366273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366416:-1
position: 366416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:364676-364795:-1:exon

position:364676:-1
position: 364676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364795:-1
position: 364795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:359917-360087:-1:exon

position:359917:-1
position: 359917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360087:-1
position: 360087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:359648-359701:-1:exon

position:359648:-1
position: 359648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359701:-1
position: 359701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:359131-359184:-1:exon

position:359131:-1
position: 359131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359184:-1
position: 359184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:358763-358903:-1:exon

position:358763:-1
position: 358763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358903:-1
position: 358903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:358425-358550:-1:exon

position:358425:-1
position: 358425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358550:-1
position: 358550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:358054-358149:-1:exon

position:358054:-1
position: 358054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358149:-1
position: 358149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:357803-357919:-1:exon

position:357803:-1
position: 357803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357919:-1
position: 357919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:352324-352394:-1:exon

position:352324:-1
position: 352324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352394:-1
position: 352394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:351372-351951:-1:exon

position:351372:-1
position: 351372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351951:-1
position: 351951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:348619-348812:-1:exon

position:348619:-1
position: 348619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348812:-1
position: 348812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:348177-348267:-1:exon

position:348177:-1
position: 348177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348267:-1
position: 348267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:343689-343829:-1:exon

position:343689:-1
position: 343689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343829:-1
position: 343829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:341350-341457:-1:exon

position:341350:-1
position: 341350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341457:-1
position: 341457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:340782-340944:-1:exon

position:340782:-1
position: 340782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340944:-1
position: 340944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:339947-340114:-1:exon

position:339947:-1
position: 339947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340114:-1
position: 340114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:337690-337827:-1:exon

position:337690:-1
position: 337690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337827:-1
position: 337827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:336864-337044:-1:exon

position:336864:-1
position: 336864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337044:-1
position: 337044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:336576-336667:-1:exon

position:336576:-1
position: 336576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336667:-1
position: 336667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:335689-335793:-1:exon

position:335689:-1
position: 335689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335793:-1
position: 335793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:333059-333228:-1:exon

position:333059:-1
position: 333059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333228:-1
position: 333228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:329098-329308:-1:exon

position:329098:-1
position: 329098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329308:-1
position: 329308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:327204-327343:-1:exon

position:327204:-1
position: 327204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327343:-1
position: 327343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:326854-326946:-1:exon

position:326854:-1
position: 326854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326946:-1
position: 326946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:325935-326043:-1:exon

position:325935:-1
position: 325935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326043:-1
position: 326043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:325634-325762:-1:exon

position:325634:-1
position: 325634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325762:-1
position: 325762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:325395-325475:-1:exon

position:325395:-1
position: 325395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325475:-1
position: 325475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:324983-325061:-1:exon

position:324983:-1
position: 324983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325061:-1
position: 325061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:322394-322685:-1:exon

position:322394:-1
position: 322394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322685:-1
position: 322685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:320878-322135:-1:exon

position:322135:-1
position: 322135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cit
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cit
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: citron Rho-interacting kinase
translation: MKVMSKSRLRALEDVALYEEERAILARNHSPWVPELQHAFQDRDNLYLVMEYLPGGDLLALMNRYEDQFDEATAQFFLAELVLAIHSVHQMGYVHRDVRPENVLLDRTGHIKLADFGSAARLTATKTVSSKLPLGTPDFTAPEVLNAAKGDAGLPYGVECDWWSLGVIAYEMIYRKSPFAEGTSTKTINNILNFQRYLKFPEEPQASREFVDLVQSLLCGPGERLGYEGLRCHPFFSSVDWNNLHHSLPPFVPTLRAEDDTSNFEEPERAPRPVAPPRQAKRSGFQGADLPFLGFFYSKALPALARSESVAAGLDSPAKTNSMEKKLHIKSKELLETQDKCHKMEQEISRFQRKMSDLESVLKQKDVELQASETQRSILEQDLATYITECSSLKRSLEQARMEVSQEDDKALQLLHDIREQSHKLQEIKEQEYQAQLEEMRVAVRQLEEDLAAARRRSDLYESELKESRLTGEELKRKAAEYQQKIQKAKEQGKAEVEELLSKLEKTNGEQQLKIQELQDKLAKAVKASTEATELLQNIRQAKERLERELERLHSREDSTDSLRRRLRETEEGRKTLENHVKRLEMVERRENRLKDDIQTKSQQIQQMADKILELEENLREAQAAAQRIEAHLAQKERLYEDKIKVLEAQMKVDLADKESLEAKWAKQEEESRENCKLISEQKAEETPEETSRCAVESSDSRACSTCSSTPCPAPVYFLWAVSAAAVALCLVLPWTCHSTHPGCIPRHEWAGLSEQRALCVMQGQKQTMAQSAGAIALLRSVHPPSFISSALQLCRGQLQVQQERWNIPVLGGVLSFHACEHRPQPHSLTLLCCQVITDLEEQLTQLSQENAELNRQNFYLSKQLDEATDESEDRLQLSQDVDRLRREVADREMHLNNQKQNLETLKTTCTMLEEQVMELETLNDELLEKERQWEAWRGALEDEKAQAERRSREMQRLLDNEKQNRLRADQRSSESRQAVELAVKEHKAEILALQQQTNLQQQMDSQKTHIYRLTQGLQEALDQTELLKTERSDLEFQLENMQAVYSHDKVKMEGTISQQTKLIDFLQAKMDQPSKKKKGIFGRRREELGGPSQVPLPYNDMKAALEKERLRCADLEEALQKMRVELRALREEAAHFKTGDHQAPSTPATARQQIIMSAIVKSPEHQPNPISLLAPSSSSRRKETSTPEEYSRRVKERMHHNIPHRFSVGLNMRATKCAVCLDTVHFGRQVATCVECQAMCHPKCSPCLPATCGLPAEYAMHFSEALSRDKASSPAQQVREASGHVRLEGWMKQPRNGKRGQQGWERKYVVLDGTKVMVYETEPREDSTKPQEELDLCLPDVEVTVHGAVGASELVNTAKSDIPYVLKLESHPHTTCWPGQSLYFMAPSFPDKQRWVAVLESVVAGGRSSREKAEADAKLLGNSLLKLEGDDRLDINCTLPLTDQVNAVREWGVRGSLSVFLMGQPSAGGSRGLWAGRGRGRRTRLLRCTERALCLIEIKKVKQSLSQSHLPAQPDLSPYIIETVKGCHLFAAGKIDNGPCICAAMPNKITILRYNESLNKFCIRKEIETSEPCSCIHFTRYSIIIGTNKFYEIEMKQFVLEEFLDKNDVSLASAIFAASSHSFPIAIMQVNNTAQKEEYLLCFHEFGVFVDSYGRRSRTDDIKWSRLPLAFAYREPYLFVTHFNSLEVIEIQSHQALSSPNKRGPPSYNEHISKRLASGPGQPELLHREPSTPHRYREGRTEFRRDKSPARPLDREKSPGRMLDSRRERSPGRMFEDRGRLHTGSVRTPLTPVNKVWDQSSV
SIO_010081: cit
subclass of: SO_0000673
so part of: cit
location: complement(join(322112..322135,322394..322685,324983..325061,325395..325475,325634..325762,325935..326043,326854..326946,327204..327343,329098..329308,333059..333228,335689..335793,336576..336667,336864..337044,337690..337827,339947..340114,340782..340944,341350..341457,343689..343829,348177..348267,348619..348812,351372..351951,352324..352394,357803..357919,358054..358149,358425..358550,358763..358903,359131..359184,359648..359701,359917..360087,364676..364795,366273..366416,368210..368315,377411..377594,381544..381697,382616..382819,383200..383293,384325..384467,389719..389820,390769..390810))
location: region:322112-390810:-1
so has part: feature:390769-390810:-1:exon
so has part: feature:389719-389820:-1:exon
so has part: feature:384325-384467:-1:exon
so has part: feature:383200-383293:-1:exon
so has part: feature:382616-382819:-1:exon
so has part: feature:381544-381697:-1:exon
so has part: feature:377411-377594:-1:exon
so has part: feature:368210-368315:-1:exon
so has part: feature:366273-366416:-1:exon
so has part: feature:364676-364795:-1:exon
so has part: feature:359917-360087:-1:exon
so has part: feature:359648-359701:-1:exon
so has part: feature:359131-359184:-1:exon
so has part: feature:358763-358903:-1:exon
so has part: feature:358425-358550:-1:exon
so has part: feature:358054-358149:-1:exon
so has part: feature:357803-357919:-1:exon
so has part: feature:352324-352394:-1:exon
so has part: feature:351372-351951:-1:exon
so has part: feature:348619-348812:-1:exon
so has part: feature:348177-348267:-1:exon
so has part: feature:343689-343829:-1:exon
so has part: feature:341350-341457:-1:exon
so has part: feature:340782-340944:-1:exon
so has part: feature:339947-340114:-1:exon
so has part: feature:337690-337827:-1:exon
so has part: feature:336864-337044:-1:exon
so has part: feature:336576-336667:-1:exon
so has part: feature:335689-335793:-1:exon
so has part: feature:333059-333228:-1:exon
so has part: feature:329098-329308:-1:exon
so has part: feature:327204-327343:-1:exon
so has part: feature:326854-326946:-1:exon
so has part: feature:325935-326043:-1:exon
so has part: feature:325634-325762:-1:exon
so has part: feature:325395-325475:-1:exon
so has part: feature:324983-325061:-1:exon
so has part: feature:322394-322685:-1:exon
so has part: feature:322112-322135:-1:exon

XP_015221332.1
type: Protein
SIO_000068: ncbiprotein

position:322112:-1
position: 322112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390810:-1
position: 390810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390769-390810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:389719-389820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384325-384467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:383200-383293:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:382616-382819:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:381544-381697:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:377411-377594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:368210-368315:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:366273-366416:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:364676-364795:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:359917-360087:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:359648-359701:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:359131-359184:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:358763-358903:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:358425-358550:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:358054-358149:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:357803-357919:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:352324-352394:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:351372-351951:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:348619-348812:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:348177-348267:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:343689-343829:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:341350-341457:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:340782-340944:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:339947-340114:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:337690-337827:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:336864-337044:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:336576-336667:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:335689-335793:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:333059-333228:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:329098-329308:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:327204-327343:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:326854-326946:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:325935-326043:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:325634-325762:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:325395-325475:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:324983-325061:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:322394-322685:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:322112-322135:-1:exon

ccdc64
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ccdc64
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 399662..437957
location: region:399662-437957:1
so has part: feature:399662-437957:1:exon
subclass of: SO_0000010

102689141
type: Gene
SIO_000068: ncbigene

position:399662:1
position: 399662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437957:1
position: 437957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399662-437957:1:exon

ccdc64
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ccdc64
product: coiled-coil domain containing 64
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_006640135.2
SIO_010081: ccdc64
subclass of: SO_0000673
so part of: ccdc64
location: join(399662..400283,403600..403815,422587..422703,426842..426988,428495..428676,431211..431427,431590..431733,432523..432653,433991..434111,435137..437957)
location: region:399662-437957:1
so has part: feature:399662-400283:1:exon
so has part: feature:403600-403815:1:exon
so has part: feature:422587-422703:1:exon
so has part: feature:426842-426988:1:exon
so has part: feature:428495-428676:1:exon
so has part: feature:431211-431427:1:exon
so has part: feature:431590-431733:1:exon
so has part: feature:432523-432653:1:exon
so has part: feature:433991-434111:1:exon
so has part: feature:435137-437957:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:399662-400283:1:exon

position:400283:1
position: 400283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:403600-403815:1:exon

position:403600:1
position: 403600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403815:1
position: 403815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:422587-422703:1:exon

position:422587:1
position: 422587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422703:1
position: 422703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:426842-426988:1:exon

position:426842:1
position: 426842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426988:1
position: 426988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:428495-428676:1:exon

position:428495:1
position: 428495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428676:1
position: 428676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:431211-431427:1:exon

position:431211:1
position: 431211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431427:1
position: 431427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:431590-431733:1:exon

position:431590:1
position: 431590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431733:1
position: 431733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:432523-432653:1:exon

position:432523:1
position: 432523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432653:1
position: 432653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:433991-434111:1:exon

position:433991:1
position: 433991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434111:1
position: 434111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:435137-437957:1:exon

position:435137:1
position: 435137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ccdc64
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ccdc64
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bicaudal D-related protein 1
translation: MSAFCLDLRARSALISAPPEVDSDGMEPPAELGATAAADSAGFRLLCPAAGGLGLALEEELAVLAGEREEERELAGVEAPASGQDPDLLALIRQKEKDLVLAARLGKALLERNQDLTKQYERMHKELTEKLEYLEQEKHELRRRLESREGEWEGRVAELEADVRQLQAEVERQQAQLREADREKSRAVQELSEQNQRLLEQLSRAAEVERQLSLQVHSLRDEFREKSISTNQHMCRLESLQAEIKMLSERKRELERRVGAILEENEALQGTADELQERALMLERQCHDKDAQLRQTQMELQEVRLSHRQLSLRLEELSEERSLQGLGSHHASLLSEIEQSMEQEELEQEREQVXXXLWEAYCQVRSLCSHLRGNDITDSALSTDSSMDESSETSSAKDVPTGSLHTALHELRRLMQNLLDGNESTGSRRSDEEALEEQVKKLGEELRAQRELYEGEQSKAHASQEEALQLHSQVTLLSVEMAALKEERDRLQAMAEVKEPSEQLQKAIRDRDEAIAKKNAMEMELAKCKIDIMSLNSQLLDAIQQKLNLSQQLEAWQDDMHRVIDQQLMDKHQEEWRKPVYSFSGGAGRRGRPPPPSARPAGDKSLFSFFKKN
SIO_010081: ccdc64
subclass of: SO_0000673
so part of: ccdc64
location: join(399888..400283,403600..403815,422587..422703,426842..426988,428495..428676,431211..431427,431590..431733,432523..432653,433991..434111,435137..435307)
location: region:399888-435307:1
so has part: feature:399888-400283:1:exon
so has part: feature:403600-403815:1:exon
so has part: feature:422587-422703:1:exon
so has part: feature:426842-426988:1:exon
so has part: feature:428495-428676:1:exon
so has part: feature:431211-431427:1:exon
so has part: feature:431590-431733:1:exon
so has part: feature:432523-432653:1:exon
so has part: feature:433991-434111:1:exon
so has part: feature:435137-435307:1:exon

XP_006640198.1
type: Protein
SIO_000068: ncbiprotein

position:399888:1
position: 399888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435307:1
position: 435307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399888-400283:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403600-403815:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:422587-422703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426842-426988:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:428495-428676:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:431211-431427:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:431590-431733:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432523-432653:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:433991-434111:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:435137-435307:1:exon

rab35
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: rab35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(439222..458390)
location: region:439222-458390:-1
so has part: feature:439222-458390:-1:exon
subclass of: SO_0000010

102699053
type: Gene
SIO_000068: ncbigene

position:439222:-1
position: 439222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458390:-1
position: 458390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439222-458390:-1:exon

rab35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: rab35
product: RAB35, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006640097.2
SIO_010081: rab35
subclass of: SO_0000673
so part of: rab35
location: complement(join(439222..442590,443549..443673,443764..443888,449646..449769,451072..451122,458090..458390))
location: region:439222-458390:-1
so has part: feature:458090-458390:-1:exon
so has part: feature:451072-451122:-1:exon
so has part: feature:449646-449769:-1:exon
so has part: feature:443764-443888:-1:exon
so has part: feature:443549-443673:-1:exon
so has part: feature:439222-442590:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:458090-458390:-1:exon

position:458090:-1
position: 458090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:451072-451122:-1:exon

position:451072:-1
position: 451072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451122:-1
position: 451122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:449646-449769:-1:exon

position:449646:-1
position: 449646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449769:-1
position: 449769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:443764-443888:-1:exon

position:443764:-1
position: 443764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443888:-1
position: 443888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:443549-443673:-1:exon

position:443549:-1
position: 443549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443673:-1
position: 443673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:439222-442590:-1:exon

position:442590:-1
position: 442590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rab35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: rab35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-35
translation: MARDYDYLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPASKVVETNDAQKFAEQMGISLFETSAKENINVEEMFNCITELVLKAKKEVLAKQQQQQQNDVVKLTKNSRRKRKCC
SIO_010081: rab35
subclass of: SO_0000673
so part of: rab35
location: complement(join(442462..442590,443549..443673,443764..443888,449646..449769,451072..451122,458090..458141))
location: region:442462-458141:-1
so has part: feature:458090-458141:-1:exon
so has part: feature:451072-451122:-1:exon
so has part: feature:449646-449769:-1:exon
so has part: feature:443764-443888:-1:exon
so has part: feature:443549-443673:-1:exon
so has part: feature:442462-442590:-1:exon

XP_006640160.1
type: Protein
SIO_000068: ncbiprotein

position:442462:-1
position: 442462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458141:-1
position: 458141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458090-458141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451072-451122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449646-449769:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443764-443888:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:443549-443673:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:442462-442590:-1:exon

gcn1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: gcn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(460568..488165)
location: region:460568-488165:-1
so has part: feature:460568-488165:-1:exon
subclass of: SO_0000010

107079702
type: Gene
SIO_000068: ncbigene

position:460568:-1
position: 460568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488165:-1
position: 488165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460568-488165:-1:exon

gcn1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: gcn1
product: GCN1, eIF2 alpha kinase activator homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365847.1
SIO_010081: gcn1
subclass of: SO_0000673
so part of: gcn1
location: complement(join(460568..460602,461700..461904,462025..462135,462571..462750,463825..463854,464078..464192,464274..464467,464563..464793,464891..465004,469269..469489,484705..484857,485148..485321,485407..485505,485768..485818,486210..486338,487323..487397,487755..487863,488099..488165))
location: region:460568-488165:-1
so has part: feature:488099-488165:-1:exon
so has part: feature:487755-487863:-1:exon
so has part: feature:487323-487397:-1:exon
so has part: feature:486210-486338:-1:exon
so has part: feature:485768-485818:-1:exon
so has part: feature:485407-485505:-1:exon
so has part: feature:485148-485321:-1:exon
so has part: feature:484705-484857:-1:exon
so has part: feature:469269-469489:-1:exon
so has part: feature:464891-465004:-1:exon
so has part: feature:464563-464793:-1:exon
so has part: feature:464274-464467:-1:exon
so has part: feature:464078-464192:-1:exon
so has part: feature:463825-463854:-1:exon
so has part: feature:462571-462750:-1:exon
so has part: feature:462025-462135:-1:exon
so has part: feature:461700-461904:-1:exon
so has part: feature:460568-460602:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:488099-488165:-1:exon

position:488099:-1
position: 488099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:487755-487863:-1:exon

position:487755:-1
position: 487755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487863:-1
position: 487863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:487323-487397:-1:exon

position:487323:-1
position: 487323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487397:-1
position: 487397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:486210-486338:-1:exon

position:486210:-1
position: 486210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486338:-1
position: 486338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:485768-485818:-1:exon

position:485768:-1
position: 485768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485818:-1
position: 485818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:485407-485505:-1:exon

position:485407:-1
position: 485407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485505:-1
position: 485505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:485148-485321:-1:exon

position:485148:-1
position: 485148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485321:-1
position: 485321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:484705-484857:-1:exon

position:484705:-1
position: 484705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484857:-1
position: 484857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:469269-469489:-1:exon

position:469269:-1
position: 469269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469489:-1
position: 469489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:464891-465004:-1:exon

position:464891:-1
position: 464891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465004:-1
position: 465004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:464563-464793:-1:exon

position:464563:-1
position: 464563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464793:-1
position: 464793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:464274-464467:-1:exon

position:464274:-1
position: 464274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464467:-1
position: 464467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:464078-464192:-1:exon

position:464078:-1
position: 464078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464192:-1
position: 464192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:463825-463854:-1:exon

position:463825:-1
position: 463825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463854:-1
position: 463854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:462571-462750:-1:exon

position:462571:-1
position: 462571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462750:-1
position: 462750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:462025-462135:-1:exon

position:462025:-1
position: 462025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462135:-1
position: 462135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:461700-461904:-1:exon

position:461700:-1
position: 461700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461904:-1
position: 461904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:460568-460602:-1:exon

position:460602:-1
position: 460602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gcn1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: gcn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translational activator GCN1
translation: MSKSKPQNHILERCAPVLRHVSHAEFKELLLPALQKSLLRSPENAMETISSLLSSVTLDLSQYAMDIGKGLASQLKANNPALMGQAVVALRNLAQQCSDPSAVQDLLTQLFSILGGSEGKLTVVAQKISVLSGIGSLSHHAASGGSSQALSTRVVELFIPFLQQEVHEGTLVHAVGVLSQWAGRLSVEVPAALLAWLKKAFTLKTSTSPVRHAYLQGMLGAFKGDTLPQAVELLPLLTQTVEKAAAQPTQQALLCEAVAAAVLLSRLCLLDTLTAITPILLDALTDPSRKTHVCLQTLLDTKFVHFIDAPSLALIMPIVQRAFQDRSTDTRKMAAQIIGNMYSLTDQKKLDAASQLALIDDLHRDLRLVSGEVKGQHLPGFCLPKKGVTCILPVLREGVLNGAPEQKEEAARALGLVIRLTSADALRPSVVNITGPLIRILGDRFSWNVKTALLETLTLLLAKVGIALKPFLPQLQTTFLKALQDSSRAVRLRAAEALGRLVTIHSKVDPLFSEQLSAIRNADDSGVRETMLQALRFVIQGAGGKVDPTIRKNITTTLLSMLGHDEDATRMSSAGCGALTPPLAPAADVSGVDWMVRHGRSMALSVAVKADAARLCGEEYRSAALDTIMANATADRIPIATSGIRAMGFLMKHQVDTEGGASVSPRITTHFVKCLQNSSSEVRLAAERVLWWVCRDPASPALEPPMVKPLLKALLDNTKDKNTGVRAQSEHTIVSLLRLRQDATLVVLGVIL
SIO_010081: gcn1
subclass of: SO_0000673
so part of: gcn1
location: complement(join(460568..460602,461700..461904,462025..462135,462571..462750,463825..463854,464078..464192,464274..464467,464563..464793,464891..465004,469269..469489,484705..484857,485148..485321,485407..485505,485768..485818,486210..486338,487323..487397,487755..487863,488099..488131))
location: region:460568-488131:-1
so has part: feature:488099-488131:-1:exon
so has part: feature:487755-487863:-1:exon
so has part: feature:487323-487397:-1:exon
so has part: feature:486210-486338:-1:exon
so has part: feature:485768-485818:-1:exon
so has part: feature:485407-485505:-1:exon
so has part: feature:485148-485321:-1:exon
so has part: feature:484705-484857:-1:exon
so has part: feature:469269-469489:-1:exon
so has part: feature:464891-465004:-1:exon
so has part: feature:464563-464793:-1:exon
so has part: feature:464274-464467:-1:exon
so has part: feature:464078-464192:-1:exon
so has part: feature:463825-463854:-1:exon
so has part: feature:462571-462750:-1:exon
so has part: feature:462025-462135:-1:exon
so has part: feature:461700-461904:-1:exon
so has part: feature:460568-460602:-1:exon

XP_015221333.1
type: Protein
SIO_000068: ncbiprotein

position:488131:-1
position: 488131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488099-488131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:487755-487863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:487323-487397:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:486210-486338:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485768-485818:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:485407-485505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:485148-485321:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:484705-484857:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:469269-469489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:464891-465004:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:464563-464793:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:464274-464467:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:464078-464192:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:463825-463854:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:462571-462750:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:462025-462135:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:461700-461904:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:460568-460602:-1:exon

LOC107079725
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(488877..490011)
location: region:488877-490011:-1
so has part: feature:488877-490011:-1:exon
subclass of: SO_0000011

107079725
type: Gene
SIO_000068: ncbigene

position:488877:-1
position: 488877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490011:-1
position: 490011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488877-490011:-1:exon

LOC107079725
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107079725
product: uncharacterized LOC107079725
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_001480635.1
SIO_010081: LOC107079725
subclass of: SO_0000673
so part of: LOC107079725
location: complement(join(488877..488969,489562..489670,489865..490011))
location: region:488877-490011:-1
so has part: feature:489865-490011:-1:exon
so has part: feature:489562-489670:-1:exon
so has part: feature:488877-488969:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489865-490011:-1:exon

position:489865:-1
position: 489865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:489562-489670:-1:exon

position:489562:-1
position: 489562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489670:-1
position: 489670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:488877-488969:-1:exon

position:488969:-1
position: 488969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rplp0
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: rplp0
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(495805..501278)
location: region:495805-501278:-1
so has part: feature:495805-501278:-1:exon
subclass of: SO_0000010

102699251
type: Gene
SIO_000068: ncbigene

position:495805:-1
position: 495805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501278:-1
position: 501278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495805-501278:-1:exon

rplp0
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: rplp0
product: ribosomal protein, large, P0
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 2801 ESTs, 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006640098.2
SIO_010081: rplp0
subclass of: SO_0000673
so part of: rplp0
location: complement(join(495805..496022,496590..496730,496829..497014,498162..498308,498562..498649,499543..499718,500363..500470,501184..501278))
location: region:495805-501278:-1
so has part: feature:501184-501278:-1:exon
so has part: feature:500363-500470:-1:exon
so has part: feature:499543-499718:-1:exon
so has part: feature:498562-498649:-1:exon
so has part: feature:498162-498308:-1:exon
so has part: feature:496829-497014:-1:exon
so has part: feature:496590-496730:-1:exon
so has part: feature:495805-496022:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:501184-501278:-1:exon

position:501184:-1
position: 501184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:500363-500470:-1:exon

position:500363:-1
position: 500363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500470:-1
position: 500470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:499543-499718:-1:exon

position:499543:-1
position: 499543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499718:-1
position: 499718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:498562-498649:-1:exon

position:498562:-1
position: 498562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498649:-1
position: 498649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:498162-498308:-1:exon

position:498162:-1
position: 498162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498308:-1
position: 498308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:496829-497014:-1:exon

position:496829:-1
position: 496829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497014:-1
position: 497014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:496590-496730:-1:exon

position:496590:-1
position: 496590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496730:-1
position: 496730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:495805-496022:-1:exon

position:496022:-1
position: 496022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rplp0
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: rplp0
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S acidic ribosomal protein P0
translation: MPREDRATWKSNYFMKIIQLLDDYPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMRKAIRGHLENNPSLEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVYDNGSVYSPEVLDITEDALQQRFLEGVRNVASVCLQIGYPTVASIPHSIINGYKRVLAVAVETDYSFPLADKVKEFLADPSAFAAATAAPVAAESAAAAPAAVKEEVKEESEESDEDMGFGLFD
SIO_010081: rplp0
subclass of: SO_0000673
so part of: rplp0
location: complement(join(495864..496022,496590..496730,496829..497014,498162..498308,498562..498649,499543..499718,500363..500416))
location: region:495864-500416:-1
so has part: feature:500363-500416:-1:exon
so has part: feature:499543-499718:-1:exon
so has part: feature:498562-498649:-1:exon
so has part: feature:498162-498308:-1:exon
so has part: feature:496829-497014:-1:exon
so has part: feature:496590-496730:-1:exon
so has part: feature:495864-496022:-1:exon

XP_006640161.1
type: Protein
SIO_000068: ncbiprotein

position:495864:-1
position: 495864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500416:-1
position: 500416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500363-500416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:499543-499718:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:498562-498649:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:498162-498308:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:496829-497014:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:496590-496730:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495864-496022:-1:exon

pxn
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: pxn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(505114..560065)
location: region:505114-560065:-1
so has part: feature:505114-560065:-1:exon
subclass of: SO_0000010

102689346
type: Gene
SIO_000068: ncbigene

position:505114:-1
position: 505114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560065:-1
position: 560065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505114-560065:-1:exon

pxn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: pxn
product: paxillin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365848.1
SIO_010081: pxn
subclass of: SO_0000673
so part of: pxn
location: complement(join(505114..508953,509201..509349,510185..510295,510485..510607,512142..512211,513196..513363,514622..514702,515005..515233,515778..516001,517260..518139,525833..525921,526487..526713,556535..560065))
location: region:505114-560065:-1
so has part: feature:556535-560065:-1:exon
so has part: feature:526487-526713:-1:exon
so has part: feature:525833-525921:-1:exon
so has part: feature:517260-518139:-1:exon
so has part: feature:515778-516001:-1:exon
so has part: feature:515005-515233:-1:exon
so has part: feature:514622-514702:-1:exon
so has part: feature:513196-513363:-1:exon
so has part: feature:512142-512211:-1:exon
so has part: feature:510485-510607:-1:exon
so has part: feature:510185-510295:-1:exon
so has part: feature:509201-509349:-1:exon
so has part: feature:505114-508953:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:556535-560065:-1:exon

position:556535:-1
position: 556535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:526487-526713:-1:exon

position:526487:-1
position: 526487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526713:-1
position: 526713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:525833-525921:-1:exon

position:525833:-1
position: 525833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525921:-1
position: 525921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:517260-518139:-1:exon

position:517260:-1
position: 517260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518139:-1
position: 518139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:515778-516001:-1:exon

position:515778:-1
position: 515778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516001:-1
position: 516001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:515005-515233:-1:exon

position:515005:-1
position: 515005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515233:-1
position: 515233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:514622-514702:-1:exon

position:514622:-1
position: 514622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514702:-1
position: 514702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:513196-513363:-1:exon

position:513196:-1
position: 513196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513363:-1
position: 513363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:512142-512211:-1:exon

position:512142:-1
position: 512142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512211:-1
position: 512211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:510485-510607:-1:exon

position:510485:-1
position: 510485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510607:-1
position: 510607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:510185-510295:-1:exon

position:510185:-1
position: 510185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510295:-1
position: 510295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:509201-509349:-1:exon

position:509201:-1
position: 509201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509349:-1
position: 509349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:505114-508953:-1:exon

position:508953:-1
position: 508953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pxn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: pxn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paxillin
translation: MDDLDALLADLESTTSHISKRPVFLPEETPYSYPTGGHTYQDVAPPVPPPPSAEALNGAVLDPLDGWSAPPPPSRYSPPQTISTVKSVPPASRDSASSPPLHSEEDHVYRHPGQPLRSCPRPSLPFSQSAVRGPFSPCRRPRLPPLRTPSPLEPLHIDEEGAGGAPHSGAPSLASRVSQSGSPAVAAAAAQQSPFPAPETRRASQEAIVDVSPSVLASQLRSLVVLSETEAQRLTSVSPAPPAAIPGPAKKEEPRVVGEYPGGRLESRPCGGGADPASVEPSLDEALDKLWDMSCALGAGAGAGEDRAEAAQEVVEERIVAVDRREVLPDTLHLREQGGKGEERVDHTAPHPDTPAGGSPRSAEGKCTTPPQGEPEAVGTPGSPLDLPPLEPPAVERISASGQIKSVIKRTKETTNVHPMYREGQPRRMLGPVIFHKSSSQDRLIEELQGKLGIGRQERWRSRQDDWLTEGVIVMSKPFPLRWDAPLDEYQDLRAPPTFAARLYPPQPAEPPFSMPVAPPCPPQPARPPGPPAPKDLVSIACQTDEDPLFPPMQALAPPPVGRHAPHLASRPPPSPPASEKIMAQGKGGGVSPTGAPKPGNKLDNMLGSLQSDLNRLGVQTVAKGVCGACKKPIAGQVVTAMGRTWHPEHFVCTHCQEEIVLVLVSCRYWWTVLVLVSCWFWWTVLCWFWWTVLVLVSCCAGLARLMLLLQKVVTALDRTWHPEHFFCAQCGSFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENYISALNALWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPITGRCITAMGKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQHCFVKLFS
SIO_010081: pxn
subclass of: SO_0000673
so part of: pxn
location: complement(join(508687..508953,509201..509349,510185..510295,510485..510607,512142..512211,513196..513363,514622..514702,515005..515233,515778..516001,517260..518139,525833..525921,526487..526713,556535..556547))
location: region:508687-556547:-1
so has part: feature:556535-556547:-1:exon
so has part: feature:526487-526713:-1:exon
so has part: feature:525833-525921:-1:exon
so has part: feature:517260-518139:-1:exon
so has part: feature:515778-516001:-1:exon
so has part: feature:515005-515233:-1:exon
so has part: feature:514622-514702:-1:exon
so has part: feature:513196-513363:-1:exon
so has part: feature:512142-512211:-1:exon
so has part: feature:510485-510607:-1:exon
so has part: feature:510185-510295:-1:exon
so has part: feature:509201-509349:-1:exon
so has part: feature:508687-508953:-1:exon

XP_015221334.1
type: Protein
SIO_000068: ncbiprotein

position:508687:-1
position: 508687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556547:-1
position: 556547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556535-556547:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526487-526713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525833-525921:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517260-518139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:515778-516001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:515005-515233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514622-514702:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:513196-513363:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:512142-512211:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:510485-510607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:510185-510295:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:509201-509349:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:508687-508953:-1:exon

ctu1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ctu1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(560072..564183)
location: region:560072-564183:-1
so has part: feature:560072-564183:-1:exon
subclass of: SO_0000010

102682338
type: Gene
SIO_000068: ncbigene

position:560072:-1
position: 560072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564183:-1
position: 564183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560072-564183:-1:exon

ctu1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ctu1
product: cytosolic thiouridylase subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006640099.2
SIO_010081: ctu1
subclass of: SO_0000673
so part of: ctu1
location: complement(join(560072..560767,562454..562966,564033..564183))
location: region:560072-564183:-1
so has part: feature:564033-564183:-1:exon
so has part: feature:562454-562966:-1:exon
so has part: feature:560072-560767:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:564033-564183:-1:exon

position:564033:-1
position: 564033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:562454-562966:-1:exon

position:562454:-1
position: 562454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562966:-1
position: 562966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:560072-560767:-1:exon

position:560767:-1
position: 560767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ctu1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ctu1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic tRNA 2-thiolation protein 1
translation: MPVPCSHCQKSSAVLRRPKTGHSLCRPCFFWAFEEEVHQTIASARLFRPGETVGIGASGGKDSTVLAHVLKVLNERHGYGLNLILLSVDEGITGYRDDSLETVKRNQQQYDLPLKIVSYEELYGWTMDAIVKQVGLKNNCTFCGVFRRQALDRGAMMLGVDKICTGHNADDVAETVLMNFLRGDIARLRRCTAITTGSEGAIPRCKPLKYAYEKEIVLYAYFKKLDYFSTECVYSPNAYRGHARAFLKDLESVRPSAIVDVIHSGENLSVKEDVRMPVQGTCARCGYISSQRLCKACVLLEGLNRGLPKLGIGKHHRLHEKLLARQPLTEQEERKLRAEEF
SIO_010081: ctu1
subclass of: SO_0000673
so part of: ctu1
location: complement(join(560238..560767,562454..562949))
location: region:560238-562949:-1
so has part: feature:562454-562949:-1:exon
so has part: feature:560238-560767:-1:exon

XP_006640162.1
type: Protein
SIO_000068: ncbiprotein

position:560238:-1
position: 560238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562949:-1
position: 562949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562454-562949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:560238-560767:-1:exon

LOC107079703
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(570657..577647)
location: region:570657-577647:-1
so has part: feature:570657-577647:-1:exon
subclass of: SO_0000010

107079703
type: Gene
SIO_000068: ncbigene

position:570657:-1
position: 570657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577647:-1
position: 577647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570657-577647:-1:exon

LOC107079703
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079703
product: uncharacterized LOC107079703
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365849.1
SIO_010081: LOC107079703
subclass of: SO_0000673
so part of: LOC107079703
location: complement(join(570657..570884,571485..571654,575898..575952,577100..577647))
location: region:570657-577647:-1
so has part: feature:577100-577647:-1:exon
so has part: feature:575898-575952:-1:exon
so has part: feature:571485-571654:-1:exon
so has part: feature:570657-570884:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:577100-577647:-1:exon

position:577100:-1
position: 577100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:575898-575952:-1:exon

position:575898:-1
position: 575898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575952:-1
position: 575952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:571485-571654:-1:exon

position:571485:-1
position: 571485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571654:-1
position: 571654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:570657-570884:-1:exon

position:570884:-1
position: 570884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107079703
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107079703
translation: MESMEEFDRESPMVMTFCQLLSEDEFEEQGLSYTERALRDLFLTMERQPELCERVVRRRKQAELERGAVGTAIRVRACVCASWAGRGAAVCVRVHVMGGAGGRRVRALCVYVPNANGIFFTTVTHPQLSFFTPQPGAQTPLRDQANVRRAPRRPSGAADCPLLPSVRNSCVDPPAPPDLGDPHADIHTAILACNPLKRLKATGIERSPGGTPICTPRRSRLAGGQESSPASAFNTALLSKFRSAQSPAPEAPPADSPGSSCSDGSGFATPPGSP
SIO_010081: LOC107079703
subclass of: SO_0000673
so part of: LOC107079703
location: complement(join(570677..570884,571485..571654,575898..575952,577100..577491))
location: region:570677-577491:-1
so has part: feature:577100-577491:-1:exon
so has part: feature:575898-575952:-1:exon
so has part: feature:571485-571654:-1:exon
so has part: feature:570677-570884:-1:exon

XP_015221335.1
type: Protein
SIO_000068: ncbiprotein

position:570677:-1
position: 570677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577491:-1
position: 577491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577100-577491:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:575898-575952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571485-571654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570677-570884:-1:exon

scarb1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: scarb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(583597..604599)
location: region:583597-604599:-1
so has part: feature:583597-604599:-1:exon
subclass of: SO_0000010

102689554
type: Gene
SIO_000068: ncbigene

position:583597:-1
position: 583597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604599:-1
position: 604599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583597-604599:-1:exon

scarb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: scarb1
product: scavenger receptor class B member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015365937.1
SIO_010081: scarb1
subclass of: SO_0000673
so part of: scarb1
location: complement(join(583597..584450,588326..588472,588813..588864,589853..589926,592171..592289,592729..592895,593513..593628,594349..594444,594551..594754,594879..595020,596804..596964,604069..604596))
location: region:583597-604596:-1
so has part: feature:604069-604596:-1:exon
so has part: feature:596804-596964:-1:exon
so has part: feature:594879-595020:-1:exon
so has part: feature:594551-594754:-1:exon
so has part: feature:594349-594444:-1:exon
so has part: feature:593513-593628:-1:exon
so has part: feature:592729-592895:-1:exon
so has part: feature:592171-592289:-1:exon
so has part: feature:589853-589926:-1:exon
so has part: feature:588813-588864:-1:exon
so has part: feature:588326-588472:-1:exon
so has part: feature:583597-584450:-1:exon

position:604596:-1
position: 604596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604069-604596:-1:exon

position:604069:-1
position: 604069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:596804-596964:-1:exon

position:596804:-1
position: 596804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596964:-1
position: 596964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:594879-595020:-1:exon

position:594879:-1
position: 594879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595020:-1
position: 595020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:594551-594754:-1:exon

position:594551:-1
position: 594551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594754:-1
position: 594754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:594349-594444:-1:exon

position:594349:-1
position: 594349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594444:-1
position: 594444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:593513-593628:-1:exon

position:593513:-1
position: 593513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593628:-1
position: 593628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:592729-592895:-1:exon

position:592729:-1
position: 592729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592895:-1
position: 592895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:592171-592289:-1:exon

position:592171:-1
position: 592171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592289:-1
position: 592289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:589853-589926:-1:exon

position:589853:-1
position: 589853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589926:-1
position: 589926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:588813-588864:-1:exon

position:588813:-1
position: 588813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588864:-1
position: 588864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:588326-588472:-1:exon

position:588326:-1
position: 588326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588472:-1
position: 588472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:583597-584450:-1:exon

position:584450:-1
position: 584450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

scarb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: scarb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scavenger receptor class B member 1 isoform X1
translation: MVLSRTKLALGLGVSGVLTAVFGTILVFVGPIVIDQQIVKNVQIDPSNSMSYTMWKDIPVPFFMSVYFFHILNPEEILRGEKPMVEQRGPYVYREYRQKHNITFHDNKTVSYREYRQYHFWRNMSVGNESDVVTVPNMLVLGAAVMMEDMPYFVRIMVSTTFKAFKEGPFLTKTVGELMWGYESKLVDFLKQYFPNMMPVEGKFGLFAEFNNSNTGLFTVFTGVDDIRKVHKVDSWNGLKEVNYWNSRQCNMINGTAGQMWPPFMTKETTLPFYSPDACRSMDLEYQRPGEVAGIPIFRYVAPKTLFANGTDYPPNEGFCPCRQSGIMNVSTCRHDSPSFLSHPHFLNGDPVLREFVLGLSPSEEEHGLFIDIHPETGVPVNVSIKLQLNLFIKSVSGITETGKISPVVIPMLWFAESGFIEGSVLTTFYNNLVLLPAIMEYLQYIFIALGLALIAVSIGLALSEQSRAEEKTPPALDRDEGLSATERTPLLQDSSQHAPHR
SIO_010081: scarb1
subclass of: SO_0000673
so part of: scarb1
location: complement(join(584340..584450,588326..588472,588813..588864,589853..589926,592171..592289,592729..592895,593513..593628,594349..594444,594551..594754,594879..595020,596804..596964,604069..604188))
location: region:584340-604188:-1
so has part: feature:604069-604188:-1:exon
so has part: feature:596804-596964:-1:exon
so has part: feature:594879-595020:-1:exon
so has part: feature:594551-594754:-1:exon
so has part: feature:594349-594444:-1:exon
so has part: feature:593513-593628:-1:exon
so has part: feature:592729-592895:-1:exon
so has part: feature:592171-592289:-1:exon
so has part: feature:589853-589926:-1:exon
so has part: feature:588813-588864:-1:exon
so has part: feature:588326-588472:-1:exon
so has part: feature:584340-584450:-1:exon

XP_015221423.1
type: Protein
SIO_000068: ncbiprotein

position:584340:-1
position: 584340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604188:-1
position: 604188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604069-604188:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596804-596964:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594879-595020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:594551-594754:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:594349-594444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:593513-593628:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:592729-592895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:592171-592289:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:589853-589926:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:588813-588864:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:588326-588472:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:584340-584450:-1:exon

scarb1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: scarb1
product: scavenger receptor class B member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015365938.1
SIO_010081: scarb1
subclass of: SO_0000673
so part of: scarb1
location: complement(join(584367..584450,586468..586578,588326..588472,588813..588864,589853..589926,592171..592289,592729..592895,593513..593628,594349..594444,594551..594754,594879..595020,596804..596964,604069..604599))
location: region:584367-604599:-1
so has part: feature:604069-604599:-1:exon
so has part: feature:596804-596964:-1:exon
so has part: feature:594879-595020:-1:exon
so has part: feature:594551-594754:-1:exon
so has part: feature:594349-594444:-1:exon
so has part: feature:593513-593628:-1:exon
so has part: feature:592729-592895:-1:exon
so has part: feature:592171-592289:-1:exon
so has part: feature:589853-589926:-1:exon
so has part: feature:588813-588864:-1:exon
so has part: feature:588326-588472:-1:exon
so has part: feature:586468-586578:-1:exon
so has part: feature:584367-584450:-1:exon

position:584367:-1
position: 584367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604069-604599:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596804-596964:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594879-595020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:594551-594754:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:594349-594444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:593513-593628:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:592729-592895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:592171-592289:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:589853-589926:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:588813-588864:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:588326-588472:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:586468-586578:-1:exon

position:586468:-1
position: 586468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586578:-1
position: 586578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:584367-584450:-1:exon

scarb1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: scarb1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scavenger receptor class B member 1 isoform X2
translation: MVLSRTKLALGLGVSGVLTAVFGTILVFVGPIVIDQQIVKNVQIDPSNSMSYTMWKDIPVPFFMSVYFFHILNPEEILRGEKPMVEQRGPYVYREYRQKHNITFHDNKTVSYREYRQYHFWRNMSVGNESDVVTVPNMLVLGAAVMMEDMPYFVRIMVSTTFKAFKEGPFLTKTVGELMWGYESKLVDFLKQYFPNMMPVEGKFGLFAEFNNSNTGLFTVFTGVDDIRKVHKVDSWNGLKEVNYWNSRQCNMINGTAGQMWPPFMTKETTLPFYSPDACRSMDLEYQRPGEVAGIPIFRYVAPKTLFANGTDYPPNEGFCPCRQSGIMNVSTCRHDSPSFLSHPHFLNGDPVLREFVLGLSPSEEEHGLFIDIHPETGVPVNVSIKLQLNLFIKSVSGITETGKISPVVIPMLWFAESGFIEGSVLTTFYNNLVLLPAIMEYLQYIFIALGLALIAVSIGLALSEQDNQVNSSVNSSSHNEMQSEKFIGTNKSSKVIQEAHF
SIO_010081: scarb1
subclass of: SO_0000673
so part of: scarb1
location: complement(join(586468..586578,588326..588472,588813..588864,589853..589926,592171..592289,592729..592895,593513..593628,594349..594444,594551..594754,594879..595020,596804..596964,604069..604188))
location: region:586468-604188:-1
so has part: feature:604069-604188:-1:exon
so has part: feature:596804-596964:-1:exon
so has part: feature:594879-595020:-1:exon
so has part: feature:594551-594754:-1:exon
so has part: feature:594349-594444:-1:exon
so has part: feature:593513-593628:-1:exon
so has part: feature:592729-592895:-1:exon
so has part: feature:592171-592289:-1:exon
so has part: feature:589853-589926:-1:exon
so has part: feature:588813-588864:-1:exon
so has part: feature:588326-588472:-1:exon
so has part: feature:586468-586578:-1:exon

XP_015221424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:604069-604188:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596804-596964:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594879-595020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:594551-594754:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:594349-594444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:593513-593628:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:592729-592895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:592171-592289:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:589853-589926:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:588813-588864:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:588326-588472:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:586468-586578:-1:exon

LOC107079723
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079723
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(618017..619468)
location: region:618017-619468:-1
so has part: feature:618017-619468:-1:exon
subclass of: SO_0000011

107079723
type: Gene
SIO_000068: ncbigene

position:618017:-1
position: 618017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619468:-1
position: 619468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618017-619468:-1:exon

LOC107079723
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107079723
product: uncharacterized LOC107079723
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_001480634.1
SIO_010081: LOC107079723
subclass of: SO_0000673
so part of: LOC107079723
location: complement(join(618017..618118,619363..619468))
location: region:618017-619468:-1
so has part: feature:619363-619468:-1:exon
so has part: feature:618017-618118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:619363-619468:-1:exon

position:619363:-1
position: 619363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:618017-618118:-1:exon

position:618118:-1
position: 618118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

trnaa-ugc
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: trnaa-ugc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(622012..622083)
location: region:622012-622083:-1
so has part: feature:622012-622083:-1:exon
subclass of: SO_0000663

102659319
type: Gene
SIO_000068: ncbigene

position:622012:-1
position: 622012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622083:-1
position: 622083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622012-622083:-1:exon

trnaa-ugc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7918
gene: trnaa-ugc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon UGC); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(622049..622051),aa:Ala,seq:tgc)
SIO_010081: trnaa-ugc
subclass of: SO_0000673
so part of: trnaa-ugc
location: complement(622012..622083)
location: region:622012-622083:-1
so has part: feature:622012-622083:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:622012-622083:-1:exon

trnad-guc
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: trnad-guc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 622490..622561
location: region:622490-622561:1
so has part: feature:622490-622561:1:exon
subclass of: SO_0000663

102659332
type: Gene
SIO_000068: ncbigene

position:622490:1
position: 622490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622561:1
position: 622561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622490-622561:1:exon

trnad-guc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7918
gene: trnad-guc
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon GUC); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:622523..622525,aa:Asp,seq:gtc)
SIO_010081: trnad-guc
subclass of: SO_0000673
so part of: trnad-guc
location: 622490..622561
location: region:622490-622561:1
so has part: feature:622490-622561:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:622490-622561:1:exon

trnaa-ugc
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: trnaa-ugc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 622733..622804
location: region:622733-622804:1
so has part: feature:622733-622804:1:exon
subclass of: SO_0000663

position:622733:1
position: 622733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622804:1
position: 622804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622733-622804:1:exon

trnaa-ugc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7918
gene: trnaa-ugc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon UGC); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:622765..622767,aa:Ala,seq:tgc)
SIO_010081: trnaa-ugc
subclass of: SO_0000673
so part of: trnaa-ugc
location: 622733..622804
location: region:622733-622804:1
so has part: feature:622733-622804:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:622733-622804:1:exon

dhx37
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: dhx37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(623531..641679)
location: region:623531-641679:-1
so has part: feature:623531-641679:-1:exon
subclass of: SO_0000010

102689750
type: Gene
SIO_000068: ncbigene

position:623531:-1
position: 623531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641679:-1
position: 641679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623531-641679:-1:exon

dhx37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: dhx37
product: DEAH (Asp-Glu-Ala-His) box polypeptide 37
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365850.1
SIO_010081: dhx37
subclass of: SO_0000673
so part of: dhx37
location: complement(join(623531..624323,624966..625063,626391..626464,627435..627529,627612..627749,629132..629248,629496..629620,629948..630136,631091..631302,632013..632043,632429..632661,632959..633035,633368..633509,634508..634578,635769..635867,636162..636276,636646..636747,637291..637404,637940..638036,638233..638325,638465..638613,639512..639863,640293..640405,641114..641394,641658..641679))
location: region:623531-641679:-1
so has part: feature:641658-641679:-1:exon
so has part: feature:641114-641394:-1:exon
so has part: feature:640293-640405:-1:exon
so has part: feature:639512-639863:-1:exon
so has part: feature:638465-638613:-1:exon
so has part: feature:638233-638325:-1:exon
so has part: feature:637940-638036:-1:exon
so has part: feature:637291-637404:-1:exon
so has part: feature:636646-636747:-1:exon
so has part: feature:636162-636276:-1:exon
so has part: feature:635769-635867:-1:exon
so has part: feature:634508-634578:-1:exon
so has part: feature:633368-633509:-1:exon
so has part: feature:632959-633035:-1:exon
so has part: feature:632429-632661:-1:exon
so has part: feature:632013-632043:-1:exon
so has part: feature:631091-631302:-1:exon
so has part: feature:629948-630136:-1:exon
so has part: feature:629496-629620:-1:exon
so has part: feature:629132-629248:-1:exon
so has part: feature:627612-627749:-1:exon
so has part: feature:627435-627529:-1:exon
so has part: feature:626391-626464:-1:exon
so has part: feature:624966-625063:-1:exon
so has part: feature:623531-624323:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:641658-641679:-1:exon

position:641658:-1
position: 641658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:641114-641394:-1:exon

position:641114:-1
position: 641114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641394:-1
position: 641394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:640293-640405:-1:exon

position:640293:-1
position: 640293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640405:-1
position: 640405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:639512-639863:-1:exon

position:639512:-1
position: 639512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639863:-1
position: 639863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:638465-638613:-1:exon

position:638465:-1
position: 638465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638613:-1
position: 638613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:638233-638325:-1:exon

position:638233:-1
position: 638233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638325:-1
position: 638325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:637940-638036:-1:exon

position:637940:-1
position: 637940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638036:-1
position: 638036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:637291-637404:-1:exon

position:637291:-1
position: 637291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637404:-1
position: 637404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:636646-636747:-1:exon

position:636646:-1
position: 636646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636747:-1
position: 636747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:636162-636276:-1:exon

position:636162:-1
position: 636162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636276:-1
position: 636276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:635769-635867:-1:exon

position:635769:-1
position: 635769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635867:-1
position: 635867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:634508-634578:-1:exon

position:634508:-1
position: 634508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634578:-1
position: 634578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:633368-633509:-1:exon

position:633368:-1
position: 633368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633509:-1
position: 633509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:632959-633035:-1:exon

position:632959:-1
position: 632959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633035:-1
position: 633035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:632429-632661:-1:exon

position:632429:-1
position: 632429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632661:-1
position: 632661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:632013-632043:-1:exon

position:632013:-1
position: 632013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632043:-1
position: 632043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:631091-631302:-1:exon

position:631091:-1
position: 631091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631302:-1
position: 631302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:629948-630136:-1:exon

position:629948:-1
position: 629948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630136:-1
position: 630136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:629496-629620:-1:exon

position:629496:-1
position: 629496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629620:-1
position: 629620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:629132-629248:-1:exon

position:629132:-1
position: 629132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629248:-1
position: 629248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:627612-627749:-1:exon

position:627612:-1
position: 627612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627749:-1
position: 627749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:627435-627529:-1:exon

position:627435:-1
position: 627435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627529:-1
position: 627529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:626391-626464:-1:exon

position:626391:-1
position: 626391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626464:-1
position: 626464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:624966-625063:-1:exon

position:624966:-1
position: 624966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625063:-1
position: 625063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:623531-624323:-1:exon

position:624323:-1
position: 624323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dhx37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: dhx37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DHX37
translation: MGIELLTWIRFVNRCLSGLDWRVFKEYSVPVCPVSNSSCPLSDGEALKGVDESNPLVLPATKKKRKPGGALETSAPRRQPLTRKQKKQLQKVLELKEKKAQRAEILSKLAQVQVSDAEMKLLYTTSKLGTGDKLYQSKHVMEDTGDGLAGQVSSVRGANRKRRRRKDADEEEEGKEGGEESDSSSGSTSEEDEEDEGERDEGQAENRDEPVEEPVGPPPEKKPAPVPEQPGPRQAENRPPSEPAVFIPVDRSPEIQAARLKLPVLSEEQAIMEAVRENHCVVLCGETGSGKTTQVPQFLYEAGYASGDAIVGVTEPRRVAAVSMSQRVAKEMNLSTRVVSYQIRYEGNVTSDTKIKFMTDGVLLKEIQKDFLLQKYRVIIIDEAHERSVYTDILIGLLSRIVPLRHKRGLPMKLIVMSATLRVEDFTENRRLFPVPPPVVKVDARQFPVTVHFNKRTPLDDYGGEAFRKTSKIHRLLPPGGILVFLTGQAEVHSLCRRLRKAFPFRPNRAVPEGDEKGDSPEEMRKFKKAKPKKTVSMPKIDLDNYSALPVDEGDEDRGAGIGDEEEGSDLDLDLGEEEGADGDAKSDPSLPLYVLPLYSLLAPEQQAKVFRPPPPGTRLCVVATNVAETSLTIPGVRYVVDCGRVKKRFYDRVTGVSSFKVTWTSQASANQRAGRAGRTEPGHCYRLYSSAVFSDFAVAIYPELAARKATVFVLLSQPVQCLHGRVLFPAQVINFPFPTPPSTEALIAAEELLVSLGALEEPPKTGRLKVLERARLSCPITPLGRVMASFPVAPRYAKMLALGRQEGCLPYVIAVVAAMTVREIFQELDRPAGSEEEQGVLTQRRARLNQMRRLWAGQGASLQLGDIMVMLGAVGACEYAGCTPRFCEDNGLRYKAMVEIRRLRGQLTTAGVSAVDPEWIPLLLPQYCHFEKPLETPPPRFCPESGRVRCWRESTFYRVGWRLSAIQVDYPEGLERYKLFARFLLEGQVCPKLRSYSKCLLSSPSTMLKTWAKLQPRTEALLGALVSEKADCRDALLAAWRRNQKYLLSPYCQWLPEAMHQDVAKSWPPL
SIO_010081: dhx37
subclass of: SO_0000673
so part of: dhx37
location: complement(join(624247..624323,624966..625063,626391..626464,627435..627529,627612..627749,629132..629248,629496..629620,629948..630136,631091..631302,632013..632043,632429..632661,632959..633035,633368..633509,634508..634578,635769..635867,636162..636276,636646..636747,637291..637404,637940..638036,638233..638325,638465..638613,639512..639863,640293..640405,641114..641394,641658..641679))
location: region:624247-641679:-1
so has part: feature:641658-641679:-1:exon
so has part: feature:641114-641394:-1:exon
so has part: feature:640293-640405:-1:exon
so has part: feature:639512-639863:-1:exon
so has part: feature:638465-638613:-1:exon
so has part: feature:638233-638325:-1:exon
so has part: feature:637940-638036:-1:exon
so has part: feature:637291-637404:-1:exon
so has part: feature:636646-636747:-1:exon
so has part: feature:636162-636276:-1:exon
so has part: feature:635769-635867:-1:exon
so has part: feature:634508-634578:-1:exon
so has part: feature:633368-633509:-1:exon
so has part: feature:632959-633035:-1:exon
so has part: feature:632429-632661:-1:exon
so has part: feature:632013-632043:-1:exon
so has part: feature:631091-631302:-1:exon
so has part: feature:629948-630136:-1:exon
so has part: feature:629496-629620:-1:exon
so has part: feature:629132-629248:-1:exon
so has part: feature:627612-627749:-1:exon
so has part: feature:627435-627529:-1:exon
so has part: feature:626391-626464:-1:exon
so has part: feature:624966-625063:-1:exon
so has part: feature:624247-624323:-1:exon

XP_015221336.1
type: Protein
SIO_000068: ncbiprotein

position:624247:-1
position: 624247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641658-641679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641114-641394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:640293-640405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639512-639863:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638465-638613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638233-638325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637940-638036:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637291-637404:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636646-636747:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636162-636276:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:635769-635867:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634508-634578:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:633368-633509:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:632959-633035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:632429-632661:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:632013-632043:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:631091-631302:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:629948-630136:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:629496-629620:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:629132-629248:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:627612-627749:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:627435-627529:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:626391-626464:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:624966-625063:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:624247-624323:-1:exon

trnad-guc
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: trnad-guc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 645882..645953
location: region:645882-645953:1
so has part: feature:645882-645953:1:exon
subclass of: SO_0000663

position:645882:1
position: 645882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645953:1
position: 645953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645882-645953:1:exon

trnad-guc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7918
gene: trnad-guc
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon GUC); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:645915..645917,aa:Asp,seq:gtc)
SIO_010081: trnad-guc
subclass of: SO_0000673
so part of: trnad-guc
location: 645882..645953
location: region:645882-645953:1
so has part: feature:645882-645953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:645882-645953:1:exon

gp1bb
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: gp1bb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(650156..654644)
location: region:650156-654644:-1
so has part: feature:650156-654644:-1:exon
subclass of: SO_0000010

102689951
type: Gene
SIO_000068: ncbigene

position:650156:-1
position: 650156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654644:-1
position: 654644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:650156-654644:-1:exon

gp1bb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: gp1bb
product: glycoprotein Ib (platelet), beta polypeptide
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015365881.1
SIO_010081: gp1bb
subclass of: SO_0000673
so part of: gp1bb
location: complement(join(650156..651123,654230..654644))
location: region:650156-654644:-1
so has part: feature:654230-654644:-1:exon
so has part: feature:650156-651123:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:654230-654644:-1:exon

position:654230:-1
position: 654230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:650156-651123:-1:exon

position:651123:-1
position: 651123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gp1bb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: gp1bb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet glycoprotein Ib beta chain
translation: MKGGARLFQLLAALLPLLVTEGCPAPCTCQRGTVDCSSRHLRTDGLPAAFPSDATRIRLHDNRLSSIPAGLFDRLPVLQGVSLHGNPWACDCGLLYLRAWLLRQEHRGLYRNVTCSSPPGLRGRLVMYLAEEEVLSSCQYWYCDLAVLTQACLFLFVLLQAVLLVLVVVFLRRFHRLAEAARGGPEESSPADADRPWLKARTE
SIO_010081: gp1bb
subclass of: SO_0000673
so part of: gp1bb
location: complement(650499..651110)
location: region:650499-651110:-1
so has part: feature:650499-651110:-1:exon

XP_015221367.1
type: Protein
SIO_000068: ncbiprotein

position:650499:-1
position: 650499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651110:-1
position: 651110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:650499-651110:-1:exon

LOC107079729
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(656059..661237)
location: region:656059-661237:-1
so has part: feature:656059-661237:-1:exon
subclass of: SO_0000010

107079729
type: Gene
SIO_000068: ncbigene

position:656059:-1
position: 656059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661237:-1
position: 661237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656059-661237:-1:exon

LOC107079729
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079729
product: septin-5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015365893.1
SIO_010081: LOC107079729
subclass of: SO_0000673
so part of: LOC107079729
location: complement(join(656059..657814,659075..659177,661075..661237))
location: region:656059-661237:-1
so has part: feature:661075-661237:-1:exon
so has part: feature:659075-659177:-1:exon
so has part: feature:656059-657814:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:661075-661237:-1:exon

position:661075:-1
position: 661075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:659075-659177:-1:exon

position:659075:-1
position: 659075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659177:-1
position: 659177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:656059-657814:-1:exon

position:657814:-1
position: 657814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107079729
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-5-like
translation: MLIRTHMHDLKDVTCDVHYENYRAQCIQQMTSKLTQDSRMDSPIPILPLPTPDVETEKLIKLKDEELKRMQEMLERMQQQMHEQEQ
SIO_010081: LOC107079729
subclass of: SO_0000673
so part of: LOC107079729
location: complement(join(657752..657814,659075..659177,661075..661169))
location: region:657752-661169:-1
so has part: feature:661075-661169:-1:exon
so has part: feature:659075-659177:-1:exon
so has part: feature:657752-657814:-1:exon

XP_015221379.1
type: Protein
SIO_000068: ncbiprotein

position:657752:-1
position: 657752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661169:-1
position: 661169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661075-661169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:659075-659177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:657752-657814:-1:exon

LOC102682536
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102682536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(682422..715493)
location: region:682422-715493:-1
so has part: feature:682422-715493:-1:exon
subclass of: SO_0000010

102682536
type: Gene
SIO_000068: ncbigene

position:682422:-1
position: 682422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715493:-1
position: 715493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:682422-715493:-1:exon

LOC102682536
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102682536
product: septin-2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015365892.1
SIO_010081: LOC102682536
subclass of: SO_0000673
so part of: LOC102682536
location: complement(join(682422..684560,685732..685871,687737..687794,688437..688520,689301..689446,689654..689755,700903..701020,702198..702332,707486..707609,708452..708538,708787..708886,709721..709770,715401..715493))
location: region:682422-715493:-1
so has part: feature:715401-715493:-1:exon
so has part: feature:709721-709770:-1:exon
so has part: feature:708787-708886:-1:exon
so has part: feature:708452-708538:-1:exon
so has part: feature:707486-707609:-1:exon
so has part: feature:702198-702332:-1:exon
so has part: feature:700903-701020:-1:exon
so has part: feature:689654-689755:-1:exon
so has part: feature:689301-689446:-1:exon
so has part: feature:688437-688520:-1:exon
so has part: feature:687737-687794:-1:exon
so has part: feature:685732-685871:-1:exon
so has part: feature:682422-684560:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:715401-715493:-1:exon

position:715401:-1
position: 715401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:709721-709770:-1:exon

position:709721:-1
position: 709721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709770:-1
position: 709770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:708787-708886:-1:exon

position:708787:-1
position: 708787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708886:-1
position: 708886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:708452-708538:-1:exon

position:708452:-1
position: 708452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708538:-1
position: 708538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:707486-707609:-1:exon

position:707486:-1
position: 707486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707609:-1
position: 707609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:702198-702332:-1:exon

position:702198:-1
position: 702198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702332:-1
position: 702332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:700903-701020:-1:exon

position:700903:-1
position: 700903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701020:-1
position: 701020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:689654-689755:-1:exon

position:689654:-1
position: 689654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689755:-1
position: 689755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:689301-689446:-1:exon

position:689301:-1
position: 689301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689446:-1
position: 689446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:688437-688520:-1:exon

position:688437:-1
position: 688437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688520:-1
position: 688520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:687737-687794:-1:exon

position:687737:-1
position: 687737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687794:-1
position: 687794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:685732-685871:-1:exon

position:685732:-1
position: 685732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685871:-1
position: 685871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:682422-684560:-1:exon

position:684560:-1
position: 684560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102682536
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102682536
product: septin-2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015365890.1
SIO_010081: LOC102682536
subclass of: SO_0000673
so part of: LOC102682536
location: complement(join(682422..684557,685732..685871,687737..687794,688437..688520,689301..689446,689654..689755,700903..701020,702198..702332,707486..707609,708452..708538,708787..708886,709721..709770,715386..715491))
location: region:682422-715491:-1
so has part: feature:715386-715491:-1:exon
so has part: feature:709721-709770:-1:exon
so has part: feature:708787-708886:-1:exon
so has part: feature:708452-708538:-1:exon
so has part: feature:707486-707609:-1:exon
so has part: feature:702198-702332:-1:exon
so has part: feature:700903-701020:-1:exon
so has part: feature:689654-689755:-1:exon
so has part: feature:689301-689446:-1:exon
so has part: feature:688437-688520:-1:exon
so has part: feature:687737-687794:-1:exon
so has part: feature:685732-685871:-1:exon
so has part: feature:682422-684557:-1:exon

position:715491:-1
position: 715491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715386-715491:-1:exon

position:715386:-1
position: 715386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:709721-709770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708787-708886:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:708452-708538:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:707486-707609:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:702198-702332:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:700903-701020:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689654-689755:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:689301-689446:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:688437-688520:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:687737-687794:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:685732-685871:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:682422-684557:-1:exon

position:684557:-1
position: 684557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102682536
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102682536
product: septin-2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_006640100.2
SIO_010081: LOC102682536
subclass of: SO_0000673
so part of: LOC102682536
location: complement(join(682422..684560,685732..685871,687737..687794,688437..688520,689301..689446,689654..689755,700903..701020,702198..702332,707486..707609,708452..708538,708787..708886,709721..709770,715386..715491))
location: region:682422-715491:-1
so has part: feature:715386-715491:-1:exon
so has part: feature:709721-709770:-1:exon
so has part: feature:708787-708886:-1:exon
so has part: feature:708452-708538:-1:exon
so has part: feature:707486-707609:-1:exon
so has part: feature:702198-702332:-1:exon
so has part: feature:700903-701020:-1:exon
so has part: feature:689654-689755:-1:exon
so has part: feature:689301-689446:-1:exon
so has part: feature:688437-688520:-1:exon
so has part: feature:687737-687794:-1:exon
so has part: feature:685732-685871:-1:exon
so has part: feature:682422-684560:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:715386-715491:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:709721-709770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708787-708886:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:708452-708538:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:707486-707609:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:702198-702332:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:700903-701020:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689654-689755:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:689301-689446:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:688437-688520:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:687737-687794:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:685732-685871:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:682422-684560:-1:exon

LOC102682536
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102682536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-2
translation: MSQSGEKGKFPEAAGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERYIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINSQDCFKTIIQYIDNQFERYLHDESGLNRRHIVDNRVHCCFYFISPFGHGLKPLDVEFMKAIHSKVNIVPVIAKADTLTLKERDRLKRRILDEIGEHGIRIYQLPDADSDEDEEFKEQTRVLKASIPFAVIGSNQLIEVKGKKIRGRLYPWGVVEVENPEHNDFLKLRTMLVTHMQDLQEVTQDLHYENFRSERLKRAGRAVEDEVVDKDQILLQKEAELRRMQEMIAQMQAQMRRKPADE
SIO_010081: LOC102682536
subclass of: SO_0000673
so part of: LOC102682536
location: complement(join(685803..685871,687737..687794,688437..688520,689301..689446,689654..689755,700903..701020,702198..702332,707486..707609,708452..708538,708787..708886,709721..709747))
location: region:685803-709747:-1
so has part: feature:709721-709747:-1:exon
so has part: feature:708787-708886:-1:exon
so has part: feature:708452-708538:-1:exon
so has part: feature:707486-707609:-1:exon
so has part: feature:702198-702332:-1:exon
so has part: feature:700903-701020:-1:exon
so has part: feature:689654-689755:-1:exon
so has part: feature:689301-689446:-1:exon
so has part: feature:688437-688520:-1:exon
so has part: feature:687737-687794:-1:exon
so has part: feature:685803-685871:-1:exon

XP_006640163.1
type: Protein
SIO_000068: ncbiprotein

position:685803:-1
position: 685803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709747:-1
position: 709747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709721-709747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:708787-708886:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708452-708538:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:707486-707609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:702198-702332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:700903-701020:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689654-689755:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689301-689446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:688437-688520:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687737-687794:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:685803-685871:-1:exon

LOC102682536
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102682536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-2
translation: MSQSGEKGKFPEAAGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERYIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINSQDCFKTIIQYIDNQFERYLHDESGLNRRHIVDNRVHCCFYFISPFGHGLKPLDVEFMKAIHSKVNIVPVIAKADTLTLKERDRLKRRILDEIGEHGIRIYQLPDADSDEDEEFKEQTRVLKASIPFAVIGSNQLIEVKGKKIRGRLYPWGVVEVENPEHNDFLKLRTMLVTHMQDLQEVTQDLHYENFRSERLKRAGRAVEDEVVDKDQILLQKEAELRRMQEMIAQMQAQMRRKPADE
SIO_010081: LOC102682536
subclass of: SO_0000673
so part of: LOC102682536
location: complement(join(685803..685871,687737..687794,688437..688520,689301..689446,689654..689755,700903..701020,702198..702332,707486..707609,708452..708538,708787..708886,709721..709747))
location: region:685803-709747:-1
so has part: feature:709721-709747:-1:exon
so has part: feature:708787-708886:-1:exon
so has part: feature:708452-708538:-1:exon
so has part: feature:707486-707609:-1:exon
so has part: feature:702198-702332:-1:exon
so has part: feature:700903-701020:-1:exon
so has part: feature:689654-689755:-1:exon
so has part: feature:689301-689446:-1:exon
so has part: feature:688437-688520:-1:exon
so has part: feature:687737-687794:-1:exon
so has part: feature:685803-685871:-1:exon

XP_015221376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:709721-709747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:708787-708886:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708452-708538:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:707486-707609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:702198-702332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:700903-701020:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689654-689755:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689301-689446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:688437-688520:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687737-687794:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:685803-685871:-1:exon

LOC102682536
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102682536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-2
translation: MSQSGEKGKFPEAAGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERYIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINSQDCFKTIIQYIDNQFERYLHDESGLNRRHIVDNRVHCCFYFISPFGHGLKPLDVEFMKAIHSKVNIVPVIAKADTLTLKERDRLKRRILDEIGEHGIRIYQLPDADSDEDEEFKEQTRVLKASIPFAVIGSNQLIEVKGKKIRGRLYPWGVVEVENPEHNDFLKLRTMLVTHMQDLQEVTQDLHYENFRSERLKRAGRAVEDEVVDKDQILLQKEAELRRMQEMIAQMQAQMRRKPADE
SIO_010081: LOC102682536
subclass of: SO_0000673
so part of: LOC102682536
location: complement(join(685803..685871,687737..687794,688437..688520,689301..689446,689654..689755,700903..701020,702198..702332,707486..707609,708452..708538,708787..708886,709721..709747))
location: region:685803-709747:-1
so has part: feature:709721-709747:-1:exon
so has part: feature:708787-708886:-1:exon
so has part: feature:708452-708538:-1:exon
so has part: feature:707486-707609:-1:exon
so has part: feature:702198-702332:-1:exon
so has part: feature:700903-701020:-1:exon
so has part: feature:689654-689755:-1:exon
so has part: feature:689301-689446:-1:exon
so has part: feature:688437-688520:-1:exon
so has part: feature:687737-687794:-1:exon
so has part: feature:685803-685871:-1:exon

XP_015221378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:709721-709747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:708787-708886:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708452-708538:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:707486-707609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:702198-702332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:700903-701020:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689654-689755:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689301-689446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:688437-688520:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687737-687794:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:685803-685871:-1:exon

cldn5
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: cldn5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 725411..727615
location: region:725411-727615:1
so has part: feature:725411-727615:1:exon
subclass of: SO_0000010

102682737
type: Gene
SIO_000068: ncbigene

position:725411:1
position: 725411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727615:1
position: 727615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725411-727615:1:exon

cldn5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cldn5
product: claudin 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365820.1
SIO_010081: cldn5
subclass of: SO_0000673
so part of: cldn5
location: 725411..727615
location: region:725411-727615:1
so has part: feature:725411-727615:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:725411-727615:1:exon

cldn5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cldn5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-5
translation: MVSAGLEILGLGLCIVGSLLVMVACGLPMWKVSAFIDSNIVVAQTIWDGLWMTCVVQSTGQMQCKVHDSVLALSQDLQTARALTIISSVMGVLGLMVTIAGAQCTNCIKGEEVKARVVNAGGVIYIISGLFVLVPLCWMANKIIVDFYNPEVPTSQKREIGAALYIGWAATALLLIGGTLLCCSCPPPGSSSYSVKYAPTKRATQNGDYDKGNYV
SIO_010081: cldn5
subclass of: SO_0000673
so part of: cldn5
location: 725905..726552
location: region:725905-726552:1
so has part: feature:725905-726552:1:exon

XP_015221306.1
type: Protein
SIO_000068: ncbiprotein

position:725905:1
position: 725905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726552:1
position: 726552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725905-726552:1:exon

cdc45
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: cdc45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(739038..751996)
location: region:739038-751996:-1
so has part: feature:739038-751996:-1:exon
subclass of: SO_0000010

102682942
type: Gene
SIO_000068: ncbigene

position:739038:-1
position: 739038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751996:-1
position: 751996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:739038-751996:-1:exon

cdc45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: cdc45
product: cell division cycle 45
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_006640102.2
SIO_010081: cdc45
subclass of: SO_0000673
so part of: cdc45
location: complement(join(739038..739185,740291..740357,740925..741001,742137..742255,742514..742597,743204..743342,743880..744041,744169..744267,744670..744801,745360..745479,745575..745625,746515..746576,746689..746737,747549..747607,748383..748529,748824..748961,749616..749739,750372..750397,751792..751996))
location: region:739038-751996:-1
so has part: feature:751792-751996:-1:exon
so has part: feature:750372-750397:-1:exon
so has part: feature:749616-749739:-1:exon
so has part: feature:748824-748961:-1:exon
so has part: feature:748383-748529:-1:exon
so has part: feature:747549-747607:-1:exon
so has part: feature:746689-746737:-1:exon
so has part: feature:746515-746576:-1:exon
so has part: feature:745575-745625:-1:exon
so has part: feature:745360-745479:-1:exon
so has part: feature:744670-744801:-1:exon
so has part: feature:744169-744267:-1:exon
so has part: feature:743880-744041:-1:exon
so has part: feature:743204-743342:-1:exon
so has part: feature:742514-742597:-1:exon
so has part: feature:742137-742255:-1:exon
so has part: feature:740925-741001:-1:exon
so has part: feature:740291-740357:-1:exon
so has part: feature:739038-739185:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:751792-751996:-1:exon

position:751792:-1
position: 751792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:750372-750397:-1:exon

position:750372:-1
position: 750372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750397:-1
position: 750397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:749616-749739:-1:exon

position:749616:-1
position: 749616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749739:-1
position: 749739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:748824-748961:-1:exon

position:748824:-1
position: 748824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748961:-1
position: 748961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:748383-748529:-1:exon

position:748383:-1
position: 748383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748529:-1
position: 748529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:747549-747607:-1:exon

position:747549:-1
position: 747549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747607:-1
position: 747607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:746689-746737:-1:exon

position:746689:-1
position: 746689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:746737:-1
position: 746737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:746515-746576:-1:exon

position:746515:-1
position: 746515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:746576:-1
position: 746576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:745575-745625:-1:exon

position:745575:-1
position: 745575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745625:-1
position: 745625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:745360-745479:-1:exon

position:745360:-1
position: 745360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745479:-1
position: 745479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:744670-744801:-1:exon

position:744670:-1
position: 744670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744801:-1
position: 744801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:744169-744267:-1:exon

position:744169:-1
position: 744169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744267:-1
position: 744267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:743880-744041:-1:exon

position:743880:-1
position: 743880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744041:-1
position: 744041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:743204-743342:-1:exon

position:743204:-1
position: 743204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743342:-1
position: 743342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:742514-742597:-1:exon

position:742514:-1
position: 742514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742597:-1
position: 742597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:742137-742255:-1:exon

position:742137:-1
position: 742137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742255:-1
position: 742255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:740925-741001:-1:exon

position:740925:-1
position: 740925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741001:-1
position: 741001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:740291-740357:-1:exon

position:740291:-1
position: 740291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740357:-1
position: 740357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:739038-739185:-1:exon

position:739185:-1
position: 739185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cdc45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: cdc45
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(749733..749735),aa:OTHER)
product: LOW QUALITY PROTEIN: cell division control protein 45 homolog
translation: MFVSDIRKEFYDVVVNQRTALGMSYRKXPACSFSFQALFHCDHVQYTLVPVRGWQDLETAFLEHKEQFRYFVLINCGANADLLETLQPEEETVFFICDTHRPVDVINVYNDTQIKLLIRQDDDLGIPAYDDIFRDEDEDEQDSGNESDEGSEPSGKRRRFEEGALERRIERQRERREWEARRREILFDYEQYEYHGTSSAMVMFELAWVMSKDTKDMLWWSVVGLTDQWVHDRIPHMKYVTDVATLQRHVSRHNHRNEDEENSLSIDCMRISFEYDLRLALYQHWSLYESICNSCYTSSSFKLWSIHGQKKLQEFLADMGLPLKQVRQKFNSMDVSIKENLREVIEESSNKYGMKDIRIQTFGVHFGFKNKFLAGDVVHAASALLENVERDEKGTDNFIKALDCLSRSNIEQLHQGIDLGKKKLMAVQQTVASCICTNLIISQGPFLYCYLMEGTPDVKLFSKPLSLTLLSKYLLKAFVRSTRNKRCKLLPLIMAAPLDTEKGTVIVVGIPPDSESSDKKNFFGRAFEKAAESTGSRTLHDHFDTSVIELKTEDRSKFLDALITLLS
SIO_010081: cdc45
subclass of: SO_0000673
so part of: cdc45
location: complement(join(740293..740357,740925..741001,742137..742255,742514..742597,743204..743342,743880..744041,744169..744267,744670..744801,745360..745479,745575..745625,746515..746576,746689..746737,747549..747607,748383..748529,748824..748961,749616..749739,750372..750397,751792..751842))
location: region:740293-751842:-1
so has part: feature:751792-751842:-1:exon
so has part: feature:750372-750397:-1:exon
so has part: feature:749616-749739:-1:exon
so has part: feature:748824-748961:-1:exon
so has part: feature:748383-748529:-1:exon
so has part: feature:747549-747607:-1:exon
so has part: feature:746689-746737:-1:exon
so has part: feature:746515-746576:-1:exon
so has part: feature:745575-745625:-1:exon
so has part: feature:745360-745479:-1:exon
so has part: feature:744670-744801:-1:exon
so has part: feature:744169-744267:-1:exon
so has part: feature:743880-744041:-1:exon
so has part: feature:743204-743342:-1:exon
so has part: feature:742514-742597:-1:exon
so has part: feature:742137-742255:-1:exon
so has part: feature:740925-741001:-1:exon
so has part: feature:740293-740357:-1:exon

XP_006640165.1
type: Protein
SIO_000068: ncbiprotein

position:740293:-1
position: 740293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751842:-1
position: 751842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751792-751842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750372-750397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:749616-749739:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:748824-748961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748383-748529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:747549-747607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:746689-746737:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:746515-746576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:745575-745625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:745360-745479:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:744670-744801:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:744169-744267:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:743880-744041:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:743204-743342:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:742514-742597:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:742137-742255:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:740925-741001:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:740293-740357:-1:exon

ufd1l
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ufd1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 752297..762758
location: region:752297-762758:1
so has part: feature:752297-762758:1:exon
subclass of: SO_0000010

102690155
type: Gene
SIO_000068: ncbigene

position:752297:1
position: 752297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762758:1
position: 762758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752297-762758:1:exon

ufd1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ufd1l
product: ubiquitin fusion degradation 1 like (yeast)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015365823.1
SIO_010081: ufd1l
subclass of: SO_0000673
so part of: ufd1l
location: join(752297..752451,754205..754337,754819..754851,755015..755136,755746..755876,756542..756614,756983..757051,758581..758649,759041..759091,759788..759876,760929..761010,762299..762758)
location: region:752297-762758:1
so has part: feature:752297-752451:1:exon
so has part: feature:754205-754337:1:exon
so has part: feature:754819-754851:1:exon
so has part: feature:755015-755136:1:exon
so has part: feature:755746-755876:1:exon
so has part: feature:756542-756614:1:exon
so has part: feature:756983-757051:1:exon
so has part: feature:758581-758649:1:exon
so has part: feature:759041-759091:1:exon
so has part: feature:759788-759876:1:exon
so has part: feature:760929-761010:1:exon
so has part: feature:762299-762758:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:752297-752451:1:exon

position:752451:1
position: 752451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:754205-754337:1:exon

position:754205:1
position: 754205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754337:1
position: 754337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:754819-754851:1:exon

position:754819:1
position: 754819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754851:1
position: 754851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:755015-755136:1:exon

position:755015:1
position: 755015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755136:1
position: 755136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:755746-755876:1:exon

position:755746:1
position: 755746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755876:1
position: 755876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:756542-756614:1:exon

position:756542:1
position: 756542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756614:1
position: 756614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:756983-757051:1:exon

position:756983:1
position: 756983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757051:1
position: 757051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:758581-758649:1:exon

position:758581:1
position: 758581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758649:1
position: 758649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:759041-759091:1:exon

position:759041:1
position: 759041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759091:1
position: 759091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:759788-759876:1:exon

position:759788:1
position: 759788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759876:1
position: 759876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:760929-761010:1:exon

position:760929:1
position: 760929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761010:1
position: 761010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:762299-762758:1:exon

position:762299:1
position: 762299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ufd1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ufd1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin fusion degradation protein 1 homolog
translation: MFSFNMFDHPIPRAFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERRSQHHEEPTEEDADHSSYAEMDVGFRAFTGSGNRLDGKKKGIEPSPAPLDPNDIKRGIPNYDFRMGKITFIRNSRPQPKKIDDEDAVNRFIAFSGEGQSLRKKGRKP
SIO_010081: ufd1l
subclass of: SO_0000673
so part of: ufd1l
location: join(752449..752451,754205..754337,754819..754851,755015..755136,755746..755876,756542..756614,756983..757051,758581..758649,759041..759091,759788..759876,760929..761010,762299..762373)
location: region:752449-762373:1
so has part: feature:752449-752451:1:exon
so has part: feature:754205-754337:1:exon
so has part: feature:754819-754851:1:exon
so has part: feature:755015-755136:1:exon
so has part: feature:755746-755876:1:exon
so has part: feature:756542-756614:1:exon
so has part: feature:756983-757051:1:exon
so has part: feature:758581-758649:1:exon
so has part: feature:759041-759091:1:exon
so has part: feature:759788-759876:1:exon
so has part: feature:760929-761010:1:exon
so has part: feature:762299-762373:1:exon

XP_015221309.1
type: Protein
SIO_000068: ncbiprotein

position:752449:1
position: 752449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762373:1
position: 762373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752449-752451:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:754205-754337:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:754819-754851:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755015-755136:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:755746-755876:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:756542-756614:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:756983-757051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:758581-758649:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:759041-759091:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:759788-759876:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:760929-761010:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:762299-762373:1:exon

clg20h22orf39
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: clg20h22orf39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 762890..766394
location: region:762890-766394:1
so has part: feature:762890-766394:1:exon
subclass of: SO_0000010

102690358
type: Gene
SIO_000068: ncbigene

position:762890:1
position: 762890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766394:1
position: 766394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762890-766394:1:exon

clg20h22orf39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: clg20h22orf39
product: chromosome LG20 open reading frame, human C22orf39
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365852.1
SIO_010081: clg20h22orf39
subclass of: SO_0000673
so part of: clg20h22orf39
location: join(762890..762904,765267..765461,766093..766394)
location: region:762890-766394:1
so has part: feature:762890-762904:1:exon
so has part: feature:765267-765461:1:exon
so has part: feature:766093-766394:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:762890-762904:1:exon

position:762904:1
position: 762904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:765267-765461:1:exon

position:765267:1
position: 765267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765461:1
position: 765461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:766093-766394:1:exon

position:766093:1
position: 766093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

clg20h22orf39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: clg20h22orf39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0545 protein C22orf39 homolog
translation: MKFSEFHLHVLRLQPPRSCADYLSEYRHCRSLMNRLHHYYTFGRAPSCQQWKTDHYSCCEWERHRGSEAKEALRDSERARVEQQRGFVPVWELRQTPPADWHAPLQQGKLKGS
SIO_010081: clg20h22orf39
subclass of: SO_0000673
so part of: clg20h22orf39
location: join(762890..762904,765267..765461,766093..766224)
location: region:762890-766224:1
so has part: feature:762890-762904:1:exon
so has part: feature:765267-765461:1:exon
so has part: feature:766093-766224:1:exon

XP_015221338.1
type: Protein
SIO_000068: ncbiprotein

position:766224:1
position: 766224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762890-762904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:765267-765461:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:766093-766224:1:exon

mrpl40
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: mrpl40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(766828..771935)
location: region:766828-771935:-1
so has part: feature:766828-771935:-1:exon
subclass of: SO_0000010

102690560
type: Gene
SIO_000068: ncbigene

position:766828:-1
position: 766828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771935:-1
position: 771935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766828-771935:-1:exon

mrpl40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mrpl40
product: mitochondrial ribosomal protein L40
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015365830.1
SIO_010081: mrpl40
subclass of: SO_0000673
so part of: mrpl40
location: complement(join(766828..767552,768675..768830,770510..770593,771702..771935))
location: region:766828-771935:-1
so has part: feature:771702-771935:-1:exon
so has part: feature:770510-770593:-1:exon
so has part: feature:768675-768830:-1:exon
so has part: feature:766828-767552:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:771702-771935:-1:exon

position:771702:-1
position: 771702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:770510-770593:-1:exon

position:770510:-1
position: 770510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770593:-1
position: 770593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:768675-768830:-1:exon

position:768675:-1
position: 768675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768830:-1
position: 768830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:766828-767552:-1:exon

position:767552:-1
position: 767552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mrpl40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mrpl40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L40, mitochondrial
translation: MSALASRFMSLWSRQSNTLCSLTARDLQSRNSHWLPSLLALKTSPPLRAEPKKKKKVDPKRELAARDRLKKKLKKLEKVPPELIPIEDFITPAKYLDETRVRLPPQLSFEESERRALLLKEWARYKQSQHEAEMKAIGSALEAQREALEELRLESEELYQAAVRPDLELFPFERQGPSHTPPKPGYQAPDGKYNDITKVYTQ
SIO_010081: mrpl40
subclass of: SO_0000673
so part of: mrpl40
location: complement(join(767243..767552,768675..768830,770510..770593,771702..771760))
location: region:767243-771760:-1
so has part: feature:771702-771760:-1:exon
so has part: feature:770510-770593:-1:exon
so has part: feature:768675-768830:-1:exon
so has part: feature:767243-767552:-1:exon

XP_015221316.1
type: Protein
SIO_000068: ncbiprotein

position:767243:-1
position: 767243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771760:-1
position: 771760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771702-771760:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:770510-770593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:768675-768830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:767243-767552:-1:exon

LOC102690766
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102690766
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 773827..796044
location: region:773827-796044:1
so has part: feature:773827-796044:1:exon
subclass of: SO_0000010

102690766
type: Gene
SIO_000068: ncbigene

position:773827:1
position: 773827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796044:1
position: 796044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:773827-796044:1:exon

LOC102690766
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102690766
product: protein HIRA
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015365819.1
SIO_010081: LOC102690766
subclass of: SO_0000673
so part of: LOC102690766
location: join(773827..774138,775222..775284,775696..775806,776884..776974,777975..778069,778221..778316,779438..779598,779989..780156,781858..781971,783019..783089,783476..783581,783990..784196,784482..784567,785137..785322,786076..786264,786667..786868,787503..787601,788196..788344,788912..789073,790579..790637,791446..791551,793445..793567,793816..793979,795739..796044)
location: region:773827-796044:1
so has part: feature:773827-774138:1:exon
so has part: feature:775222-775284:1:exon
so has part: feature:775696-775806:1:exon
so has part: feature:776884-776974:1:exon
so has part: feature:777975-778069:1:exon
so has part: feature:778221-778316:1:exon
so has part: feature:779438-779598:1:exon
so has part: feature:779989-780156:1:exon
so has part: feature:781858-781971:1:exon
so has part: feature:783019-783089:1:exon
so has part: feature:783476-783581:1:exon
so has part: feature:783990-784196:1:exon
so has part: feature:784482-784567:1:exon
so has part: feature:785137-785322:1:exon
so has part: feature:786076-786264:1:exon
so has part: feature:786667-786868:1:exon
so has part: feature:787503-787601:1:exon
so has part: feature:788196-788344:1:exon
so has part: feature:788912-789073:1:exon
so has part: feature:790579-790637:1:exon
so has part: feature:791446-791551:1:exon
so has part: feature:793445-793567:1:exon
so has part: feature:793816-793979:1:exon
so has part: feature:795739-796044:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:773827-774138:1:exon

position:774138:1
position: 774138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:775222-775284:1:exon

position:775222:1
position: 775222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775284:1
position: 775284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:775696-775806:1:exon

position:775696:1
position: 775696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775806:1
position: 775806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:776884-776974:1:exon

position:776884:1
position: 776884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776974:1
position: 776974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:777975-778069:1:exon

position:777975:1
position: 777975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778069:1
position: 778069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:778221-778316:1:exon

position:778221:1
position: 778221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778316:1
position: 778316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:779438-779598:1:exon

position:779438:1
position: 779438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779598:1
position: 779598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:779989-780156:1:exon

position:779989:1
position: 779989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780156:1
position: 780156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:781858-781971:1:exon

position:781858:1
position: 781858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781971:1
position: 781971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:783019-783089:1:exon

position:783019:1
position: 783019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783089:1
position: 783089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:783476-783581:1:exon

position:783476:1
position: 783476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783581:1
position: 783581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:783990-784196:1:exon

position:783990:1
position: 783990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784196:1
position: 784196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:784482-784567:1:exon

position:784482:1
position: 784482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784567:1
position: 784567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:785137-785322:1:exon

position:785137:1
position: 785137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785322:1
position: 785322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:786076-786264:1:exon

position:786076:1
position: 786076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786264:1
position: 786264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:786667-786868:1:exon

position:786667:1
position: 786667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786868:1
position: 786868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:787503-787601:1:exon

position:787503:1
position: 787503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787601:1
position: 787601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:788196-788344:1:exon

position:788196:1
position: 788196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788344:1
position: 788344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:788912-789073:1:exon

position:788912:1
position: 788912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789073:1
position: 789073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:790579-790637:1:exon

position:790579:1
position: 790579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790637:1
position: 790637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:791446-791551:1:exon

position:791446:1
position: 791446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791551:1
position: 791551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:793445-793567:1:exon

position:793445:1
position: 793445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793567:1
position: 793567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:793816-793979:1:exon

position:793816:1
position: 793816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793979:1
position: 793979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:795739-796044:1:exon

position:795739:1
position: 795739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102690766
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102690766
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein HIRA
translation: MKLLKPTWVSHNGKPIFSIDIHPEGTKFATGGQGEDSGKVVIWNMAPVLREEDEKNETVPKMLCQMDNHLACVNCVRWSNNGLYLASGGDDKLVMVWKRAAYIGPSTVFGSSSKLANVEQWRCVTILRSHTGDVMDVAWSPHDVWLASCSVDNTVVIWNARKFPEIITTLQGHTGLVKGLTWDPVGKYIASQADDRSLKVWRTMDWQLETSITKPFNECGGTTHVLRLSWSPDGQYLVSAHAMNNSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSPKPSCPYCCCAVGSKDRSVSVWLTCLKRPLVVIHDLFDKSIMDITWTLNGLGILVCSMDGSVAFLDFSQDELGDPLNEDEKNSIHQNIYGKSLAITTEAQLSTTIIENPEMLKYQQEKQVAEHRDAASREAAAPKLTSVVNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSPALFNSVPILPGSSMSSQLTPQLTSSDSNTANSLGLKPSQDTPPAPPSKPPDEPQHKDGVGVSSSVPATVANSTVMKTNLLLTTAAKIEPMKALDSRFTERSKATPGVAVSSPAVSVAPLERVKDAGGAKESRVKEETSSDSEDKMAAIKSLSKRKGDAEGAEVVEKRKKGRPRKDSAKIVTLTPTTLQLTPSAEKEPSRVVTPMAVLKLPTPTPQKAFTLQISSEPSVYIEVENEVSALAGAKLCRLKCHREGREWDALLPSRIITAAGSCDVICVACEDRMLSVFSACGRRLLPAILLQAPMSALHCAGFYVMALTACATLSVWDVQKQCVLVKNESLQIILSGTDTTVSQSFLTQQGVPVISLSNGKSYCFNTSLETWNLIADKQDSLAHCADYRNCLPSQEAMMASGPLAVTQGRTVNAGRQASRLSSTPHHVQQGMTLAFLENQLASALILKSSQEYRHWLLIYARFLVNEGSEYRLRELCKDLLGPVHKSTGSVWEATVLVRI
SIO_010081: LOC102690766
subclass of: SO_0000673
so part of: LOC102690766
location: join(774102..774138,775222..775284,775696..775806,776884..776974,777975..778069,778221..778316,779438..779598,779989..780156,781858..781971,783019..783089,783476..783581,783990..784196,784482..784567,785137..785322,786076..786264,786667..786868,787503..787601,788196..788344,788912..789073,790579..790637,791446..791551,793445..793567,793816..793979,795739..795839)
location: region:774102-795839:1
so has part: feature:774102-774138:1:exon
so has part: feature:775222-775284:1:exon
so has part: feature:775696-775806:1:exon
so has part: feature:776884-776974:1:exon
so has part: feature:777975-778069:1:exon
so has part: feature:778221-778316:1:exon
so has part: feature:779438-779598:1:exon
so has part: feature:779989-780156:1:exon
so has part: feature:781858-781971:1:exon
so has part: feature:783019-783089:1:exon
so has part: feature:783476-783581:1:exon
so has part: feature:783990-784196:1:exon
so has part: feature:784482-784567:1:exon
so has part: feature:785137-785322:1:exon
so has part: feature:786076-786264:1:exon
so has part: feature:786667-786868:1:exon
so has part: feature:787503-787601:1:exon
so has part: feature:788196-788344:1:exon
so has part: feature:788912-789073:1:exon
so has part: feature:790579-790637:1:exon
so has part: feature:791446-791551:1:exon
so has part: feature:793445-793567:1:exon
so has part: feature:793816-793979:1:exon
so has part: feature:795739-795839:1:exon

XP_015221305.1
type: Protein
SIO_000068: ncbiprotein

position:774102:1
position: 774102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795839:1
position: 795839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774102-774138:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775222-775284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:775696-775806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:776884-776974:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:777975-778069:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:778221-778316:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:779438-779598:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:779989-780156:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:781858-781971:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:783019-783089:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:783476-783581:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:783990-784196:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:784482-784567:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:785137-785322:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:786076-786264:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:786667-786868:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:787503-787601:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:788196-788344:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:788912-789073:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:790579-790637:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:791446-791551:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:793445-793567:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:793816-793979:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:795739-795839:1:exon

LOC107079699
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(838564..844182)
location: region:838564-844182:-1
so has part: feature:838564-844182:-1:exon
subclass of: SO_0000011

107079699
type: Gene
SIO_000068: ncbigene

position:838564:-1
position: 838564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844182:-1
position: 844182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838564-844182:-1:exon

LOC107079699
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107079699
product: uncharacterized LOC107079699
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_001480633.1
SIO_010081: LOC107079699
subclass of: SO_0000673
so part of: LOC107079699
location: complement(join(838564..840928,841035..841234,841337..844182))
location: region:838564-844182:-1
so has part: feature:841337-844182:-1:exon
so has part: feature:841035-841234:-1:exon
so has part: feature:838564-840928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:841337-844182:-1:exon

position:841337:-1
position: 841337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:841035-841234:-1:exon

position:841035:-1
position: 841035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841234:-1
position: 841234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:838564-840928:-1:exon

position:840928:-1
position: 840928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102691165
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC102691165
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1025693..1219184)
location: region:1025693-1219184:-1
so has part: feature:1025693-1219184:-1:exon
subclass of: SO_0000010

102691165
type: Gene
SIO_000068: ncbigene

position:1025693:-1
position: 1025693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219184:-1
position: 1219184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025693-1219184:-1:exon

LOC102691165
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC102691165
product: transmembrane protein 132C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365853.1
SIO_010081: LOC102691165
subclass of: SO_0000673
so part of: LOC102691165
location: complement(join(1025693..1026640,1027868..1028141,1030312..1030364,1032245..1032451,1033854..1034127,1035736..1035941,1055015..1055158,1080799..1080985,1126501..1126641,1160943..1161831,1218495..1219184))
location: region:1025693-1219184:-1
so has part: feature:1218495-1219184:-1:exon
so has part: feature:1160943-1161831:-1:exon
so has part: feature:1126501-1126641:-1:exon
so has part: feature:1080799-1080985:-1:exon
so has part: feature:1055015-1055158:-1:exon
so has part: feature:1035736-1035941:-1:exon
so has part: feature:1033854-1034127:-1:exon
so has part: feature:1032245-1032451:-1:exon
so has part: feature:1030312-1030364:-1:exon
so has part: feature:1027868-1028141:-1:exon
so has part: feature:1025693-1026640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1218495-1219184:-1:exon

position:1218495:-1
position: 1218495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1160943-1161831:-1:exon

position:1160943:-1
position: 1160943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161831:-1
position: 1161831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1126501-1126641:-1:exon

position:1126501:-1
position: 1126501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126641:-1
position: 1126641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1080799-1080985:-1:exon

position:1080799:-1
position: 1080799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080985:-1
position: 1080985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1055015-1055158:-1:exon

position:1055015:-1
position: 1055015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1055158:-1
position: 1055158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1035736-1035941:-1:exon

position:1035736:-1
position: 1035736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1035941:-1
position: 1035941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1033854-1034127:-1:exon

position:1033854:-1
position: 1033854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034127:-1
position: 1034127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1032245-1032451:-1:exon

position:1032245:-1
position: 1032245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1032451:-1
position: 1032451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1030312-1030364:-1:exon

position:1030312:-1
position: 1030312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030364:-1
position: 1030364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1027868-1028141:-1:exon

position:1027868:-1
position: 1027868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028141:-1
position: 1028141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1025693-1026640:-1:exon

position:1026640:-1
position: 1026640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102691165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC102691165
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 132C-like
translation: MKRLRVEKGSMLQTCPVLKMIFLTSFWRAAESRGASDAQPRFNSLSTYLPVSFQIQNAVSSFFLKEAGQEVMRNSSLQARTEPFFIHMAEGIPSVNCSYGNLSAEATVPLELLQSMPRLLSSPSQATVNWKIRAHIVNDRVHLQRPRVQTLFYLAGRSWDEASPPENLPCIKVFAFQETQEVMAGCRLEGNLGICVAELELLPLWFHPSSGVQGRKKASEQGEVTSVELYYTVQPLEGGRECSTKDPRKGNNAIRQGQDEATPSLQRIGSVYLTHSQEEDPEVTRLRLDDNIEIWLPSSPVKQGQVITFRIHMGTSATVDQFTLRALFNEGVNFLAVKPSDPAAWDIKQEVGPGSSAVTASCHRKSTSAGNRVDSASYEVLQVDFEIDNFISLRSTQTVTWQVEYPGNSIVPVEAASHVYVSQRELTGIVPLAEDTEVLNTAILTGRLVTVPVKVVTVERDGTVREVEDAPACRSTDEDVIKVSEACDFVLVNGREMRGQQGVRVNFTYLYLGTQLELTVWVPRLPLQIEVSDAELSQVKGWRVPIVANKRPTRESDDEEDDEKKGKGCTLQYQHAMVRVLTHFVAEPADPGGELVYMLGSDWQADITELVEDFFKVEDPRIARLQDGRVLIGKDLGITTIQVLSPLSDSILAEKTVTVLDDKVTITDLGVQLVAGLTLALQPSPGSSWAIMAIATGQELLHSSKQVMHSPLVALFPLDKSFQTSTPLWPTRESDDEEDDEKKGKGCTLQYQHAMVRVLTHFVAEPADPGGELVYMLGSDWQADITELVEDFFKVEDPRIARLQDGRVLIGKDLGITTIQGAPGGGEGGGDPESGTGDRRQKGSEQDKAGPDGWKHNSASSDREEGAMRKVSTTTKTTITNLVAGSKPVDDEGPVKNIDLTGFPAQVDLPSGGDSEGDLSQTARGLSDLEIGMYALLGVFCLAILVFLINCVTFALKYRHKQVPALEQGSLNHAHDWVWLGNDAELLEHHGDTSPQQDECTTIIDRGEESKYLLNGGCQKNIQGQVHRAAEPGPCNGKELKSEPPNSPTSKRKRVKFTSFATVLPDDGGPYTNSILIGNEDDIKWVCQDMDLGHSTEIRTYMERLQDNL
SIO_010081: LOC102691165
subclass of: SO_0000673
so part of: LOC102691165
location: complement(join(1025771..1026640,1027868..1028141,1030312..1030364,1032245..1032451,1033854..1034127,1035736..1035941,1055015..1055158,1080799..1080985,1126501..1126641,1160943..1161831,1218495..1218579))
location: region:1025771-1218579:-1
so has part: feature:1218495-1218579:-1:exon
so has part: feature:1160943-1161831:-1:exon
so has part: feature:1126501-1126641:-1:exon
so has part: feature:1080799-1080985:-1:exon
so has part: feature:1055015-1055158:-1:exon
so has part: feature:1035736-1035941:-1:exon
so has part: feature:1033854-1034127:-1:exon
so has part: feature:1032245-1032451:-1:exon
so has part: feature:1030312-1030364:-1:exon
so has part: feature:1027868-1028141:-1:exon
so has part: feature:1025771-1026640:-1:exon

XP_015221339.1
type: Protein
SIO_000068: ncbiprotein

position:1025771:-1
position: 1025771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218579:-1
position: 1218579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1218495-1218579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1160943-1161831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1126501-1126641:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1080799-1080985:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1055015-1055158:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1035736-1035941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1033854-1034127:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1032245-1032451:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1030312-1030364:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1027868-1028141:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1025771-1026640:-1:exon

aacs
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: aacs
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1259934..1309234)
location: region:1259934-1309234:-1
so has part: feature:1259934-1309234:-1:exon
subclass of: SO_0000010

102691366
type: Gene
SIO_000068: ncbigene

position:1259934:-1
position: 1259934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1309234:-1
position: 1309234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259934-1309234:-1:exon

aacs
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: aacs
product: acetoacetyl-CoA synthetase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_006640146.2
SIO_010081: aacs
subclass of: SO_0000673
so part of: aacs
location: complement(join(1259934..1263625,1268358..1268560,1269006..1269064,1269170..1269239,1270628..1270753,1271183..1271296,1275926..1276048,1277924..1277988,1289434..1289670,1290597..1290812,1293127..1293272,1295281..1295378,1304488..1304601,1306771..1306891,1307719..1307822,1308983..1309234))
location: region:1259934-1309234:-1
so has part: feature:1308983-1309234:-1:exon
so has part: feature:1307719-1307822:-1:exon
so has part: feature:1306771-1306891:-1:exon
so has part: feature:1304488-1304601:-1:exon
so has part: feature:1295281-1295378:-1:exon
so has part: feature:1293127-1293272:-1:exon
so has part: feature:1290597-1290812:-1:exon
so has part: feature:1289434-1289670:-1:exon
so has part: feature:1277924-1277988:-1:exon
so has part: feature:1275926-1276048:-1:exon
so has part: feature:1271183-1271296:-1:exon
so has part: feature:1270628-1270753:-1:exon
so has part: feature:1269170-1269239:-1:exon
so has part: feature:1269006-1269064:-1:exon
so has part: feature:1268358-1268560:-1:exon
so has part: feature:1259934-1263625:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1308983-1309234:-1:exon

position:1308983:-1
position: 1308983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1307719-1307822:-1:exon

position:1307719:-1
position: 1307719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307822:-1
position: 1307822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1306771-1306891:-1:exon

position:1306771:-1
position: 1306771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1306891:-1
position: 1306891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1304488-1304601:-1:exon

position:1304488:-1
position: 1304488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1304601:-1
position: 1304601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1295281-1295378:-1:exon

position:1295281:-1
position: 1295281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295378:-1
position: 1295378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1293127-1293272:-1:exon

position:1293127:-1
position: 1293127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293272:-1
position: 1293272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1290597-1290812:-1:exon

position:1290597:-1
position: 1290597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290812:-1
position: 1290812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1289434-1289670:-1:exon

position:1289434:-1
position: 1289434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1289670:-1
position: 1289670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1277924-1277988:-1:exon

position:1277924:-1
position: 1277924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277988:-1
position: 1277988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1275926-1276048:-1:exon

position:1275926:-1
position: 1275926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276048:-1
position: 1276048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1271183-1271296:-1:exon

position:1271183:-1
position: 1271183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271296:-1
position: 1271296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1270628-1270753:-1:exon

position:1270628:-1
position: 1270628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1270753:-1
position: 1270753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1269170-1269239:-1:exon

position:1269170:-1
position: 1269170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1269239:-1
position: 1269239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1269006-1269064:-1:exon

position:1269006:-1
position: 1269006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1269064:-1
position: 1269064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1268358-1268560:-1:exon

position:1268358:-1
position: 1268358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1268560:-1
position: 1268560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1259934-1263625:-1:exon

position:1263625:-1
position: 1263625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

aacs
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: aacs
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetoacetyl-CoA synthetase
translation: MSKDTEGVSEEIMESKVLWYPDSKKNTQMDRFRAQVNRDFGLSLANYSDLYQWSVQSYPEFWAEVWKFCGIVGSQTYEEVVDVTKGISDVPEWFRGSRLNYAENLLKHKDKDKVALYAATEAREEITKVTFGELRRDVALYAAAMRKMGILAGDRVVGYLPNGIHAVEAMLAAASIGAIWSSTSPDFGVNGVLDRFSQIQPKLIFSVAEVVYNNKTHDHMEKLRSVVKGGAMGETTGELNFLRWWSLGGVVTPMAAVLTRVRVCCFSPQTGWMMWNWLVSSLAVGASVVLYDGSPLVPSPNVLWDLVDRLGVFLDDFLATGKEGDQDPQLEFEQLPFSHPLFIMYSSGTTGAPKCMVHSAGVGPDRSWGRTGGTAGVGGCKVRRRWKIALITVFGTGAKWLSVLEERNLKPAETHNLQTLHTILSTGSPLKPQSYEYVYRCIKGSVLLGSISGGTDIVSCFMGQNFTVPVHRGEIQARNLGMAVEAWSDEGKPVWGESGELVCLKPMPCQPTHFWNDENGSKYHKAYFSTFPGVWAHGDYCKINPHTGGVIMLGRSDGTLNPNGVRFGSSEIYNIVEAFEEVSDSLCVPQYNKDGEERVILFLKMCPDKTFSEGLVKNIRQAIREALSARHIPALILETQDIPYTISGKKVEVAVKQVIAGKEVTQIGAFSNPASLDLYKNLPVLQNF
SIO_010081: aacs
subclass of: SO_0000673
so part of: aacs
location: complement(join(1263488..1263625,1268358..1268560,1269006..1269064,1269170..1269239,1270628..1270753,1271183..1271296,1275926..1276048,1277924..1277988,1289434..1289670,1290597..1290812,1293127..1293272,1295281..1295378,1304488..1304601,1306771..1306891,1307719..1307822,1308983..1309115))
location: region:1263488-1309115:-1
so has part: feature:1308983-1309115:-1:exon
so has part: feature:1307719-1307822:-1:exon
so has part: feature:1306771-1306891:-1:exon
so has part: feature:1304488-1304601:-1:exon
so has part: feature:1295281-1295378:-1:exon
so has part: feature:1293127-1293272:-1:exon
so has part: feature:1290597-1290812:-1:exon
so has part: feature:1289434-1289670:-1:exon
so has part: feature:1277924-1277988:-1:exon
so has part: feature:1275926-1276048:-1:exon
so has part: feature:1271183-1271296:-1:exon
so has part: feature:1270628-1270753:-1:exon
so has part: feature:1269170-1269239:-1:exon
so has part: feature:1269006-1269064:-1:exon
so has part: feature:1268358-1268560:-1:exon
so has part: feature:1263488-1263625:-1:exon

XP_006640209.1
type: Protein
SIO_000068: ncbiprotein

position:1263488:-1
position: 1263488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1309115:-1
position: 1309115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1308983-1309115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1307719-1307822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306771-1306891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1304488-1304601:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1295281-1295378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1293127-1293272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290597-1290812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1289434-1289670:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1277924-1277988:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1275926-1276048:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1271183-1271296:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1270628-1270753:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1269170-1269239:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1269006-1269064:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1268358-1268560:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1263488-1263625:-1:exon

bri3bp
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: bri3bp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1319017..1322604)
location: region:1319017-1322604:-1
so has part: feature:1319017-1322604:-1:exon
subclass of: SO_0000010

102683146
type: Gene
SIO_000068: ncbigene

position:1319017:-1
position: 1319017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1322604:-1
position: 1322604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1319017-1322604:-1:exon

bri3bp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: bri3bp
product: BRI3 binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_006640103.2
SIO_010081: bri3bp
subclass of: SO_0000673
so part of: bri3bp
location: complement(join(1319017..1319552,1321022..1321124,1322279..1322604))
location: region:1319017-1322604:-1
so has part: feature:1322279-1322604:-1:exon
so has part: feature:1321022-1321124:-1:exon
so has part: feature:1319017-1319552:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1322279-1322604:-1:exon

position:1322279:-1
position: 1322279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1321022-1321124:-1:exon

position:1321022:-1
position: 1321022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1321124:-1
position: 1321124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1319017-1319552:-1:exon

position:1319552:-1
position: 1319552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

bri3bp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: bri3bp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRI3-binding protein
translation: MKVIRLIAIIAILLASLQCVEAARSRKDSSSQNSFRRAANGLYQTLSSIFGEDNIRALHKFFSKTTERFVYGVDAFLDTIWKIWTDLLDVLGIDSSNLTYYFSQTALTSSPARTLLLVASVVVAYWLLSLFLGGLFYLLQVAFGRFFWLVRVVLFALSCLYILQKFEGDPERAVLPLCFVMAVYFMTGPVGSYWRKGGSSLEDKIDHLDGQIRLLNIRLSRVIESLDRGSEQ
SIO_010081: bri3bp
subclass of: SO_0000673
so part of: bri3bp
location: complement(join(1319137..1319552,1321022..1321124,1322279..1322458))
location: region:1319137-1322458:-1
so has part: feature:1322279-1322458:-1:exon
so has part: feature:1321022-1321124:-1:exon
so has part: feature:1319137-1319552:-1:exon

XP_006640166.1
type: Protein
SIO_000068: ncbiprotein

position:1319137:-1
position: 1319137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1322458:-1
position: 1322458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1322279-1322458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1321022-1321124:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1319137-1319552:-1:exon

ppil2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ppil2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1325133..1390180
location: region:1325133-1390180:1
so has part: feature:1325133-1390180:1:exon
subclass of: SO_0000010

102683347
type: Gene
SIO_000068: ncbigene

position:1325133:1
position: 1325133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390180:1
position: 1390180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1325133-1390180:1:exon

ppil2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ppil2
product: peptidylprolyl isomerase like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365854.1
SIO_010081: ppil2
subclass of: SO_0000673
so part of: ppil2
location: join(1325133..1325391,1325762..1325811,1327882..1327927,1328008..1328070,1329134..1329185,1333253..1333398,1335418..1335482,1339883..1339974,1340127..1340216,1343850..1343925,1344192..1344352,1346932..1347007,1349229..1349335,1359970..1360059,1363107..1363140,1377180..1377297,1379742..1379759,1384145..1384186,1384795..1384867,1386327..1386389,1387213..1387358,1389477..1390180)
location: region:1325133-1390180:1
so has part: feature:1325133-1325391:1:exon
so has part: feature:1325762-1325811:1:exon
so has part: feature:1327882-1327927:1:exon
so has part: feature:1328008-1328070:1:exon
so has part: feature:1329134-1329185:1:exon
so has part: feature:1333253-1333398:1:exon
so has part: feature:1335418-1335482:1:exon
so has part: feature:1339883-1339974:1:exon
so has part: feature:1340127-1340216:1:exon
so has part: feature:1343850-1343925:1:exon
so has part: feature:1344192-1344352:1:exon
so has part: feature:1346932-1347007:1:exon
so has part: feature:1349229-1349335:1:exon
so has part: feature:1359970-1360059:1:exon
so has part: feature:1363107-1363140:1:exon
so has part: feature:1377180-1377297:1:exon
so has part: feature:1379742-1379759:1:exon
so has part: feature:1384145-1384186:1:exon
so has part: feature:1384795-1384867:1:exon
so has part: feature:1386327-1386389:1:exon
so has part: feature:1387213-1387358:1:exon
so has part: feature:1389477-1390180:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1325133-1325391:1:exon

position:1325391:1
position: 1325391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1325762-1325811:1:exon

position:1325762:1
position: 1325762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325811:1
position: 1325811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1327882-1327927:1:exon

position:1327882:1
position: 1327882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1327927:1
position: 1327927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1328008-1328070:1:exon

position:1328008:1
position: 1328008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1328070:1
position: 1328070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1329134-1329185:1:exon

position:1329134:1
position: 1329134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1329185:1
position: 1329185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1333253-1333398:1:exon

position:1333253:1
position: 1333253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1333398:1
position: 1333398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1335418-1335482:1:exon

position:1335418:1
position: 1335418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335482:1
position: 1335482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1339883-1339974:1:exon

position:1339883:1
position: 1339883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1339974:1
position: 1339974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1340127-1340216:1:exon

position:1340127:1
position: 1340127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1340216:1
position: 1340216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1343850-1343925:1:exon

position:1343850:1
position: 1343850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343925:1
position: 1343925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1344192-1344352:1:exon

position:1344192:1
position: 1344192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1344352:1
position: 1344352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1346932-1347007:1:exon

position:1346932:1
position: 1346932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1347007:1
position: 1347007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1349229-1349335:1:exon

position:1349229:1
position: 1349229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1349335:1
position: 1349335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1359970-1360059:1:exon

position:1359970:1
position: 1359970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1360059:1
position: 1360059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1363107-1363140:1:exon

position:1363107:1
position: 1363107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1363140:1
position: 1363140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1377180-1377297:1:exon

position:1377180:1
position: 1377180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1377297:1
position: 1377297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1379742-1379759:1:exon

position:1379742:1
position: 1379742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1379759:1
position: 1379759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1384145-1384186:1:exon

position:1384145:1
position: 1384145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384186:1
position: 1384186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1384795-1384867:1:exon

position:1384795:1
position: 1384795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384867:1
position: 1384867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1386327-1386389:1:exon

position:1386327:1
position: 1386327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386389:1
position: 1386389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1387213-1387358:1:exon

position:1387213:1
position: 1387213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387358:1
position: 1387358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1389477-1390180:1:exon

position:1389477:1
position: 1389477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ppil2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ppil2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase-like 2
translation: MGKRQHQKDKMYITCSEYTHFYGGKRAEIPQANFRRLPFDHCSLSLQPFEYPMCTPEGHVFDLLSIVPWIKKFGTNPITGEITPSSVSGQSLGRIEWHRGRLLWLGVSANKTGGGGGRYGRLFVALRAESPARLHSTSNSWASSSHPLERRRKYHCPVLYTVFTNNSHIVANRMTGNVFSHEAVEQLNIKTKSYKDLLTDEPFTRQDIITLQDPTNLDKFNVSNFFHVKNNLKVPDPDEEKARLDPSYHLKNANLETRETLAELYKDFKGDEMLAATMKEPEKKKTDRLNAAHYSTGRVSASFTSTAMAPETTHEADAIEDDAVRYQYVKKKGYVRLHTNKGDVNLELHCDKVPKACENFIKLCQKGYYDGTVFHRSIRNFMIQGGDPTGTGTGGESYWGKPFKDEFRPNLSHTGRGVLSMANSGPNTNKSQFFITFRSRRERGNSEALAGEIVVGGFETLTAMENVESDAKTDRPKSEIKLLSATVFVDPYEEADAQIAAERERDVRKQEEEERARATAAAPKSGADAAPRTFRPGVGKYINTAATKRSTAGAEGGPSTSAAAAKRPKGRAGFGDFSSW
SIO_010081: ppil2
subclass of: SO_0000673
so part of: ppil2
location: join(1325360..1325391,1325762..1325811,1327882..1327927,1328008..1328070,1329134..1329185,1333253..1333398,1335418..1335482,1339883..1339974,1340127..1340216,1343850..1343925,1344192..1344352,1346932..1347007,1349229..1349335,1359970..1360059,1363107..1363140,1377180..1377297,1379742..1379759,1384145..1384186,1384795..1384867,1386327..1386389,1387213..1387358,1389477..1389579)
location: region:1325360-1389579:1
so has part: feature:1325360-1325391:1:exon
so has part: feature:1325762-1325811:1:exon
so has part: feature:1327882-1327927:1:exon
so has part: feature:1328008-1328070:1:exon
so has part: feature:1329134-1329185:1:exon
so has part: feature:1333253-1333398:1:exon
so has part: feature:1335418-1335482:1:exon
so has part: feature:1339883-1339974:1:exon
so has part: feature:1340127-1340216:1:exon
so has part: feature:1343850-1343925:1:exon
so has part: feature:1344192-1344352:1:exon
so has part: feature:1346932-1347007:1:exon
so has part: feature:1349229-1349335:1:exon
so has part: feature:1359970-1360059:1:exon
so has part: feature:1363107-1363140:1:exon
so has part: feature:1377180-1377297:1:exon
so has part: feature:1379742-1379759:1:exon
so has part: feature:1384145-1384186:1:exon
so has part: feature:1384795-1384867:1:exon
so has part: feature:1386327-1386389:1:exon
so has part: feature:1387213-1387358:1:exon
so has part: feature:1389477-1389579:1:exon

XP_015221340.1
type: Protein
SIO_000068: ncbiprotein

position:1325360:1
position: 1325360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1389579:1
position: 1389579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1325360-1325391:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1325762-1325811:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1327882-1327927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1328008-1328070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1329134-1329185:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1333253-1333398:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1335418-1335482:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1339883-1339974:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1340127-1340216:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1343850-1343925:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1344192-1344352:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1346932-1347007:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1349229-1349335:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1359970-1360059:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1363107-1363140:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1377180-1377297:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1379742-1379759:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1384145-1384186:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1384795-1384867:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1386327-1386389:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1387213-1387358:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1389477-1389579:1:exon

LOC107079732
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079732
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1390459..1396379)
location: region:1390459-1396379:-1
so has part: feature:1390459-1396379:-1:exon
subclass of: SO_0000011

107079732
type: Gene
SIO_000068: ncbigene

position:1390459:-1
position: 1390459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1396379:-1
position: 1396379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1390459-1396379:-1:exon

LOC107079732
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7918
nc RNA class: lncRNA
gene: LOC107079732
product: uncharacterized LOC107079732
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001480643.1
SIO_010081: LOC107079732
subclass of: SO_0000673
so part of: LOC107079732
location: complement(join(1390459..1391287,1395547..1395864,1395955..1396379))
location: region:1390459-1396379:-1
so has part: feature:1395955-1396379:-1:exon
so has part: feature:1395547-1395864:-1:exon
so has part: feature:1390459-1391287:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1395955-1396379:-1:exon

position:1395955:-1
position: 1395955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1395547-1395864:-1:exon

position:1395547:-1
position: 1395547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1395864:-1
position: 1395864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1390459-1391287:-1:exon

position:1391287:-1
position: 1391287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ypel1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ypel1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1423597..1442529)
location: region:1423597-1442529:-1
so has part: feature:1423597-1442529:-1:exon
subclass of: SO_0000010

102683554
type: Gene
SIO_000068: ncbigene

position:1423597:-1
position: 1423597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442529:-1
position: 1442529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1423597-1442529:-1:exon

ypel1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ypel1
product: yippee like 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015365920.1
SIO_010081: ypel1
subclass of: SO_0000673
so part of: ypel1
location: complement(join(1423597..1426561,1427451..1427559,1427978..1428021,1436928..1437128,1441876..1442529))
location: region:1423597-1442529:-1
so has part: feature:1441876-1442529:-1:exon
so has part: feature:1436928-1437128:-1:exon
so has part: feature:1427978-1428021:-1:exon
so has part: feature:1427451-1427559:-1:exon
so has part: feature:1423597-1426561:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1441876-1442529:-1:exon

position:1441876:-1
position: 1441876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1436928-1437128:-1:exon

position:1436928:-1
position: 1436928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1437128:-1
position: 1437128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1427978-1428021:-1:exon

position:1427978:-1
position: 1427978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428021:-1
position: 1428021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1427451-1427559:-1:exon

position:1427451:-1
position: 1427451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1427559:-1
position: 1427559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1423597-1426561:-1:exon

position:1426561:-1
position: 1426561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ypel1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ypel1
product: yippee like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015365916.1
SIO_010081: ypel1
subclass of: SO_0000673
so part of: ypel1
location: complement(join(1423597..1426561,1427451..1427559,1427978..1428021,1436928..1437212,1441876..1442529))
location: region:1423597-1442529:-1
so has part: feature:1441876-1442529:-1:exon
so has part: feature:1436928-1437212:-1:exon
so has part: feature:1427978-1428021:-1:exon
so has part: feature:1427451-1427559:-1:exon
so has part: feature:1423597-1426561:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1441876-1442529:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1436928-1437212:-1:exon

position:1437212:-1
position: 1437212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1427978-1428021:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1427451-1427559:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1423597-1426561:-1:exon

ypel1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ypel1
product: yippee like 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015365919.1
SIO_010081: ypel1
subclass of: SO_0000673
so part of: ypel1
location: complement(join(1423597..1426561,1427451..1427559,1427978..1428021,1436928..1437128,1440545..1440754))
location: region:1423597-1440754:-1
so has part: feature:1440545-1440754:-1:exon
so has part: feature:1436928-1437128:-1:exon
so has part: feature:1427978-1428021:-1:exon
so has part: feature:1427451-1427559:-1:exon
so has part: feature:1423597-1426561:-1:exon

position:1440754:-1
position: 1440754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1440545-1440754:-1:exon

position:1440545:-1
position: 1440545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1436928-1437128:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427978-1428021:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1427451-1427559:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1423597-1426561:-1:exon

ypel1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ypel1
product: yippee like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015365917.1
SIO_010081: ypel1
subclass of: SO_0000673
so part of: ypel1
location: complement(join(1423597..1426561,1427451..1427559,1427978..1428021,1436928..1437212,1440545..1440752))
location: region:1423597-1440752:-1
so has part: feature:1440545-1440752:-1:exon
so has part: feature:1436928-1437212:-1:exon
so has part: feature:1427978-1428021:-1:exon
so has part: feature:1427451-1427559:-1:exon
so has part: feature:1423597-1426561:-1:exon

position:1440752:-1
position: 1440752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1440545-1440752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1436928-1437212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427978-1428021:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1427451-1427559:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1423597-1426561:-1:exon

ypel1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ypel1
product: yippee like 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_006640105.2
SIO_010081: ypel1
subclass of: SO_0000673
so part of: ypel1
location: complement(join(1423597..1426561,1427451..1427559,1427978..1428021,1436928..1437128,1439817..1439971))
location: region:1423597-1439971:-1
so has part: feature:1439817-1439971:-1:exon
so has part: feature:1436928-1437128:-1:exon
so has part: feature:1427978-1428021:-1:exon
so has part: feature:1427451-1427559:-1:exon
so has part: feature:1423597-1426561:-1:exon

position:1439971:-1
position: 1439971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1439817-1439971:-1:exon

position:1439817:-1
position: 1439817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1436928-1437128:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427978-1428021:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1427451-1427559:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1423597-1426561:-1:exon

ypel1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ypel1
product: yippee like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015365918.1
SIO_010081: ypel1
subclass of: SO_0000673
so part of: ypel1
location: complement(join(1423597..1426561,1427451..1427559,1427978..1428021,1436928..1437212,1439817..1439971))
location: region:1423597-1439971:-1
so has part: feature:1439817-1439971:-1:exon
so has part: feature:1436928-1437212:-1:exon
so has part: feature:1427978-1428021:-1:exon
so has part: feature:1427451-1427559:-1:exon
so has part: feature:1423597-1426561:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1439817-1439971:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1436928-1437212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427978-1428021:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1427451-1427559:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1423597-1426561:-1:exon

ypel1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ypel1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein yippee-like 1
translation: MVKMTKSKTFQAYLPNCHRTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKFIIELAHMIKDNGWE
SIO_010081: ypel1
subclass of: SO_0000673
so part of: ypel1
location: complement(join(1426472..1426561,1427451..1427559,1427978..1428021,1436928..1437044))
location: region:1426472-1437044:-1
so has part: feature:1436928-1437044:-1:exon
so has part: feature:1427978-1428021:-1:exon
so has part: feature:1427451-1427559:-1:exon
so has part: feature:1426472-1426561:-1:exon

XP_006640168.1
type: Protein
SIO_000068: ncbiprotein

position:1426472:-1
position: 1426472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1437044:-1
position: 1437044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1436928-1437044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1427978-1428021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427451-1427559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1426472-1426561:-1:exon

ypel1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ypel1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein yippee-like 1
translation: MVKMTKSKTFQAYLPNCHRTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKFIIELAHMIKDNGWE
SIO_010081: ypel1
subclass of: SO_0000673
so part of: ypel1
location: complement(join(1426472..1426561,1427451..1427559,1427978..1428021,1436928..1437044))
location: region:1426472-1437044:-1
so has part: feature:1436928-1437044:-1:exon
so has part: feature:1427978-1428021:-1:exon
so has part: feature:1427451-1427559:-1:exon
so has part: feature:1426472-1426561:-1:exon

XP_015221402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1436928-1437044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1427978-1428021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427451-1427559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1426472-1426561:-1:exon

ypel1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ypel1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein yippee-like 1
translation: MVKMTKSKTFQAYLPNCHRTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKFIIELAHMIKDNGWE
SIO_010081: ypel1
subclass of: SO_0000673
so part of: ypel1
location: complement(join(1426472..1426561,1427451..1427559,1427978..1428021,1436928..1437044))
location: region:1426472-1437044:-1
so has part: feature:1436928-1437044:-1:exon
so has part: feature:1427978-1428021:-1:exon
so has part: feature:1427451-1427559:-1:exon
so has part: feature:1426472-1426561:-1:exon

XP_015221403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1436928-1437044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1427978-1428021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427451-1427559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1426472-1426561:-1:exon

ypel1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ypel1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein yippee-like 1
translation: MVKMTKSKTFQAYLPNCHRTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKFIIELAHMIKDNGWE
SIO_010081: ypel1
subclass of: SO_0000673
so part of: ypel1
location: complement(join(1426472..1426561,1427451..1427559,1427978..1428021,1436928..1437044))
location: region:1426472-1437044:-1
so has part: feature:1436928-1437044:-1:exon
so has part: feature:1427978-1428021:-1:exon
so has part: feature:1427451-1427559:-1:exon
so has part: feature:1426472-1426561:-1:exon

XP_015221404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1436928-1437044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1427978-1428021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427451-1427559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1426472-1426561:-1:exon

ypel1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ypel1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein yippee-like 1
translation: MVKMTKSKTFQAYLPNCHRTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKFIIELAHMIKDNGWE
SIO_010081: ypel1
subclass of: SO_0000673
so part of: ypel1
location: complement(join(1426472..1426561,1427451..1427559,1427978..1428021,1436928..1437044))
location: region:1426472-1437044:-1
so has part: feature:1436928-1437044:-1:exon
so has part: feature:1427978-1428021:-1:exon
so has part: feature:1427451-1427559:-1:exon
so has part: feature:1426472-1426561:-1:exon

XP_015221405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1436928-1437044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1427978-1428021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427451-1427559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1426472-1426561:-1:exon

ypel1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ypel1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein yippee-like 1
translation: MVKMTKSKTFQAYLPNCHRTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKFIIELAHMIKDNGWE
SIO_010081: ypel1
subclass of: SO_0000673
so part of: ypel1
location: complement(join(1426472..1426561,1427451..1427559,1427978..1428021,1436928..1437044))
location: region:1426472-1437044:-1
so has part: feature:1436928-1437044:-1:exon
so has part: feature:1427978-1428021:-1:exon
so has part: feature:1427451-1427559:-1:exon
so has part: feature:1426472-1426561:-1:exon

XP_015221406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1436928-1437044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1427978-1428021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427451-1427559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1426472-1426561:-1:exon

mapk1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: mapk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1457125..1483275)
location: region:1457125-1483275:-1
so has part: feature:1457125-1483275:-1:exon
subclass of: SO_0000010

102683764
type: Gene
SIO_000068: ncbigene

position:1457125:-1
position: 1457125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1483275:-1
position: 1483275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1457125-1483275:-1:exon

mapk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mapk1
product: mitogen-activated protein kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006640106.2
SIO_010081: mapk1
subclass of: SO_0000673
so part of: mapk1
location: complement(join(1457125..1457469,1457953..1458080,1458765..1458874,1460116..1460247,1461320..1461434,1462593..1462709,1463175..1463364,1465701..1465883,1483108..1483275))
location: region:1457125-1483275:-1
so has part: feature:1483108-1483275:-1:exon
so has part: feature:1465701-1465883:-1:exon
so has part: feature:1463175-1463364:-1:exon
so has part: feature:1462593-1462709:-1:exon
so has part: feature:1461320-1461434:-1:exon
so has part: feature:1460116-1460247:-1:exon
so has part: feature:1458765-1458874:-1:exon
so has part: feature:1457953-1458080:-1:exon
so has part: feature:1457125-1457469:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1483108-1483275:-1:exon

position:1483108:-1
position: 1483108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1465701-1465883:-1:exon

position:1465701:-1
position: 1465701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1465883:-1
position: 1465883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1463175-1463364:-1:exon

position:1463175:-1
position: 1463175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1463364:-1
position: 1463364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1462593-1462709:-1:exon

position:1462593:-1
position: 1462593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1462709:-1
position: 1462709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1461320-1461434:-1:exon

position:1461320:-1
position: 1461320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1461434:-1
position: 1461434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1460116-1460247:-1:exon

position:1460116:-1
position: 1460116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1460247:-1
position: 1460247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1458765-1458874:-1:exon

position:1458765:-1
position: 1458765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1458874:-1
position: 1458874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1457953-1458080:-1:exon

position:1457953:-1
position: 1457953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1458080:-1
position: 1458080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1457125-1457469:-1:exon

position:1457469:-1
position: 1457469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mapk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: mapk1
product: mitogen-activated protein kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015365932.1
SIO_010081: mapk1
subclass of: SO_0000673
so part of: mapk1
location: complement(join(1457125..1457632,1457953..1458080,1458765..1458874,1460116..1460247,1461320..1461434,1462593..1462709,1463175..1463364,1465701..1465883,1483108..1483275))
location: region:1457125-1483275:-1
so has part: feature:1483108-1483275:-1:exon
so has part: feature:1465701-1465883:-1:exon
so has part: feature:1463175-1463364:-1:exon
so has part: feature:1462593-1462709:-1:exon
so has part: feature:1461320-1461434:-1:exon
so has part: feature:1460116-1460247:-1:exon
so has part: feature:1458765-1458874:-1:exon
so has part: feature:1457953-1458080:-1:exon
so has part: feature:1457125-1457632:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1483108-1483275:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1465701-1465883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1463175-1463364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1462593-1462709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1461320-1461434:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1460116-1460247:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1458765-1458874:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1457953-1458080:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1457125-1457632:-1:exon

position:1457632:-1
position: 1457632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mapk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mapk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 1
translation: MATAAVSGAAGGAPNTGSGAELVRGQAFDVGPRYSNLSYIGEGAYGMVCSAYDKENKVRVAIKKISPFEHQTYCQRTLREIKILLRFKHENIIGINDIIRAPSIDQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINIKARNYLLSLPLRNKVPWNRLFPNADPKALDLLDKMLTFNPHKRIEVEEALAHPYLEQYYDPTDEPVAEAPFKFDMELDDLPKETLKELIFEETARFQPGYRS
SIO_010081: mapk1
subclass of: SO_0000673
so part of: mapk1
location: complement(join(1457964..1458080,1458765..1458874,1460116..1460247,1461320..1461434,1462593..1462709,1463175..1463364,1465701..1465883,1483108..1483253))
location: region:1457964-1483253:-1
so has part: feature:1483108-1483253:-1:exon
so has part: feature:1465701-1465883:-1:exon
so has part: feature:1463175-1463364:-1:exon
so has part: feature:1462593-1462709:-1:exon
so has part: feature:1461320-1461434:-1:exon
so has part: feature:1460116-1460247:-1:exon
so has part: feature:1458765-1458874:-1:exon
so has part: feature:1457964-1458080:-1:exon

XP_006640169.1
type: Protein
SIO_000068: ncbiprotein

position:1457964:-1
position: 1457964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1483253:-1
position: 1483253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1483108-1483253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1465701-1465883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1463175-1463364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1462593-1462709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1461320-1461434:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1460116-1460247:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1458765-1458874:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1457964-1458080:-1:exon

mapk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: mapk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 1
translation: MATAAVSGAAGGAPNTGSGAELVRGQAFDVGPRYSNLSYIGEGAYGMVCSAYDKENKVRVAIKKISPFEHQTYCQRTLREIKILLRFKHENIIGINDIIRAPSIDQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINIKARNYLLSLPLRNKVPWNRLFPNADPKALDLLDKMLTFNPHKRIEVEEALAHPYLEQYYDPTDEPVAEAPFKFDMELDDLPKETLKELIFEETARFQPGYRS
SIO_010081: mapk1
subclass of: SO_0000673
so part of: mapk1
location: complement(join(1457964..1458080,1458765..1458874,1460116..1460247,1461320..1461434,1462593..1462709,1463175..1463364,1465701..1465883,1483108..1483253))
location: region:1457964-1483253:-1
so has part: feature:1483108-1483253:-1:exon
so has part: feature:1465701-1465883:-1:exon
so has part: feature:1463175-1463364:-1:exon
so has part: feature:1462593-1462709:-1:exon
so has part: feature:1461320-1461434:-1:exon
so has part: feature:1460116-1460247:-1:exon
so has part: feature:1458765-1458874:-1:exon
so has part: feature:1457964-1458080:-1:exon

XP_015221418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1483108-1483253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1465701-1465883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1463175-1463364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1462593-1462709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1461320-1461434:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1460116-1460247:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1458765-1458874:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1457964-1458080:-1:exon

ppm1f
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ppm1f
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1491707..1504679)
location: region:1491707-1504679:-1
so has part: feature:1491707-1504679:-1:exon
subclass of: SO_0000010

102691568
type: Gene
SIO_000068: ncbigene

position:1491707:-1
position: 1491707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1504679:-1
position: 1504679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1491707-1504679:-1:exon

ppm1f
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ppm1f
product: protein phosphatase, Mg2+/Mn2+ dependent 1F
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365855.1
SIO_010081: ppm1f
subclass of: SO_0000673
so part of: ppm1f
location: complement(join(1491707..1491716,1492347..1492491,1493143..1493236,1494361..1494504,1495309..1495497,1497738..1497937,1500622..1500728,1503271..1503471,1504534..1504679))
location: region:1491707-1504679:-1
so has part: feature:1504534-1504679:-1:exon
so has part: feature:1503271-1503471:-1:exon
so has part: feature:1500622-1500728:-1:exon
so has part: feature:1497738-1497937:-1:exon
so has part: feature:1495309-1495497:-1:exon
so has part: feature:1494361-1494504:-1:exon
so has part: feature:1493143-1493236:-1:exon
so has part: feature:1492347-1492491:-1:exon
so has part: feature:1491707-1491716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1504534-1504679:-1:exon

position:1504534:-1
position: 1504534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1503271-1503471:-1:exon

position:1503271:-1
position: 1503271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1503471:-1
position: 1503471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1500622-1500728:-1:exon

position:1500622:-1
position: 1500622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1500728:-1
position: 1500728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1497738-1497937:-1:exon

position:1497738:-1
position: 1497738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1497937:-1
position: 1497937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1495309-1495497:-1:exon

position:1495309:-1
position: 1495309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1495497:-1
position: 1495497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1494361-1494504:-1:exon

position:1494361:-1
position: 1494361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494504:-1
position: 1494504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1493143-1493236:-1:exon

position:1493143:-1
position: 1493143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1493236:-1
position: 1493236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1492347-1492491:-1:exon

position:1492347:-1
position: 1492347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1492491:-1
position: 1492491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1491707-1491716:-1:exon

position:1491716:-1
position: 1491716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ppm1f
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ppm1f
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1F
translation: MGTEEQAARSFLDELVKEFPGPLGPEQPLPVSPLSGTVSQAEIRGECLDVALRLLRARNAPEGLSAALSHAAVAELLKSDLSAFAQEQEQAAPLMRSEPLQRRFLNELLEVCRGRQQSREPPPAGRRFLRASAHAIRNARRKMEDRHVVLTHFNQLFGLEDQTERSYFAVFDGHGGVDAATYAATHLHVNVGQHEALLSDPALALKSAFTQTDDMFREKASRERLRSGSTGVAVLLAGDCLHVAWLGDSQAMLVREGQVVTLMEPHKPEREDEKKRIEDLGGCIAFMGCWRVNGTYAVSRAIGDFDQKPYVSGEPDGASFPLGGAEDFLLLACDGFFDAVQPREAAGAVLEKL
SIO_010081: ppm1f
subclass of: SO_0000673
so part of: ppm1f
location: complement(join(1491707..1491716,1492347..1492491,1493143..1493236,1494361..1494504,1495309..1495497,1497738..1497937,1500622..1500728,1503271..1503443))
location: region:1491707-1503443:-1
so has part: feature:1503271-1503443:-1:exon
so has part: feature:1500622-1500728:-1:exon
so has part: feature:1497738-1497937:-1:exon
so has part: feature:1495309-1495497:-1:exon
so has part: feature:1494361-1494504:-1:exon
so has part: feature:1493143-1493236:-1:exon
so has part: feature:1492347-1492491:-1:exon
so has part: feature:1491707-1491716:-1:exon

XP_015221341.1
type: Protein
SIO_000068: ncbiprotein

position:1503443:-1
position: 1503443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1503271-1503443:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1500622-1500728:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1497738-1497937:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1495309-1495497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1494361-1494504:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1493143-1493236:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1492347-1492491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1491707-1491716:-1:exon

top3b
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: top3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1506133..1533571)
location: region:1506133-1533571:-1
so has part: feature:1506133-1533571:-1:exon
subclass of: SO_0000010

102691766
type: Gene
SIO_000068: ncbigene

position:1506133:-1
position: 1506133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1533571:-1
position: 1533571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1506133-1533571:-1:exon

top3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: top3b
product: topoisomerase (DNA) III beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365856.1
SIO_010081: top3b
subclass of: SO_0000673
so part of: top3b
location: complement(join(1506133..1506702,1511570..1511686,1511966..1512115,1513239..1513367,1514615..1514788,1515981..1516127,1517527..1517632,1518564..1518718,1519052..1519142,1520212..1520325,1521995..1522151,1523036..1523232,1524832..1524906,1525369..1525475,1526251..1526382,1532821..1532977,1533496..1533571))
location: region:1506133-1533571:-1
so has part: feature:1533496-1533571:-1:exon
so has part: feature:1532821-1532977:-1:exon
so has part: feature:1526251-1526382:-1:exon
so has part: feature:1525369-1525475:-1:exon
so has part: feature:1524832-1524906:-1:exon
so has part: feature:1523036-1523232:-1:exon
so has part: feature:1521995-1522151:-1:exon
so has part: feature:1520212-1520325:-1:exon
so has part: feature:1519052-1519142:-1:exon
so has part: feature:1518564-1518718:-1:exon
so has part: feature:1517527-1517632:-1:exon
so has part: feature:1515981-1516127:-1:exon
so has part: feature:1514615-1514788:-1:exon
so has part: feature:1513239-1513367:-1:exon
so has part: feature:1511966-1512115:-1:exon
so has part: feature:1511570-1511686:-1:exon
so has part: feature:1506133-1506702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1533496-1533571:-1:exon

position:1533496:-1
position: 1533496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1532821-1532977:-1:exon

position:1532821:-1
position: 1532821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1532977:-1
position: 1532977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1526251-1526382:-1:exon

position:1526251:-1
position: 1526251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1526382:-1
position: 1526382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1525369-1525475:-1:exon

position:1525369:-1
position: 1525369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1525475:-1
position: 1525475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1524832-1524906:-1:exon

position:1524832:-1
position: 1524832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1524906:-1
position: 1524906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1523036-1523232:-1:exon

position:1523036:-1
position: 1523036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1523232:-1
position: 1523232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1521995-1522151:-1:exon

position:1521995:-1
position: 1521995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1522151:-1
position: 1522151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1520212-1520325:-1:exon

position:1520212:-1
position: 1520212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1520325:-1
position: 1520325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1519052-1519142:-1:exon

position:1519052:-1
position: 1519052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1519142:-1
position: 1519142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1518564-1518718:-1:exon

position:1518564:-1
position: 1518564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1518718:-1
position: 1518718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1517527-1517632:-1:exon

position:1517527:-1
position: 1517527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1517632:-1
position: 1517632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1515981-1516127:-1:exon

position:1515981:-1
position: 1515981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1516127:-1
position: 1516127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1514615-1514788:-1:exon

position:1514615:-1
position: 1514615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514788:-1
position: 1514788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1513239-1513367:-1:exon

position:1513239:-1
position: 1513239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1513367:-1
position: 1513367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1511966-1512115:-1:exon

position:1511966:-1
position: 1511966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1512115:-1
position: 1512115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1511570-1511686:-1:exon

position:1511570:-1
position: 1511570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511686:-1
position: 1511686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1506133-1506702:-1:exon

position:1506702:-1
position: 1506702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

top3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: top3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA topoisomerase 3-beta-1
translation: MKTVLMVAEKPSLAQSIAKILSKGSCTSRKGLNGACSVHEYTGGFMGQTVRFRMTSVCGHVMTLDFIGKYNNWDKVDPAELFSKAPTEKKEANPKLNMVKFLQVEAKGCDSVVLWLDCDKEGENICFEVLDAITPVMNKPYGGEKTVHRAKFSSITDTDIWNAMNRLGEPNRNEALSVDARQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPELYWVLQAKVSKGKDGPLTLDWDRVRVFDREVAQMFLNMIKTTREARVESVTKKEKAKQRPLALNTVEMLRVASSALGMGPQHTMQVAERLYTQGYISYPRTETTHYPENFDLKGTLRQQANNPFWADTVRALLSEGLNHPRKGSDAGDHPPITPMRSASENELGSDGWRLYEYITRHFIATVSHDCKYLQTTIVFSIGTETFICTGKTLISAGFTEVMPWQSIPEEENLPACERGDAFAVDDIKLLEKQTSPPDYLTEAELISLMEKHGIGTDASIPVHINNVCQRNYVTVESGRRLKPTNLGIVLVHGYYKIDAELVLPTIRSAVERQLNLIAQGKANFQQVLQHTLDIFKRKFHYFVDSIAGMDELMEVSFSPIAATGKPLSRCGKCHRFMKYIQVRQRQGMGCNECTHPSCQHSLSSLGISQCVECESGVLVFDPTSGPKWKMACNRCNVVVHFFENAHKVRVSPDSCEACEASLLVVDFNKARSPLPGDETQHTGCAFCDPVFQDLVELKHATMRHPMHRAGGARRQGGRGRGRRPGGRGNPKKPKDKMAALAAYFV
SIO_010081: top3b
subclass of: SO_0000673
so part of: top3b
location: complement(join(1506224..1506702,1511570..1511686,1511966..1512115,1513239..1513367,1514615..1514788,1515981..1516127,1517527..1517632,1518564..1518718,1519052..1519142,1520212..1520325,1521995..1522151,1523036..1523232,1524832..1524906,1525369..1525475,1526251..1526382,1532821..1532890))
location: region:1506224-1532890:-1
so has part: feature:1532821-1532890:-1:exon
so has part: feature:1526251-1526382:-1:exon
so has part: feature:1525369-1525475:-1:exon
so has part: feature:1524832-1524906:-1:exon
so has part: feature:1523036-1523232:-1:exon
so has part: feature:1521995-1522151:-1:exon
so has part: feature:1520212-1520325:-1:exon
so has part: feature:1519052-1519142:-1:exon
so has part: feature:1518564-1518718:-1:exon
so has part: feature:1517527-1517632:-1:exon
so has part: feature:1515981-1516127:-1:exon
so has part: feature:1514615-1514788:-1:exon
so has part: feature:1513239-1513367:-1:exon
so has part: feature:1511966-1512115:-1:exon
so has part: feature:1511570-1511686:-1:exon
so has part: feature:1506224-1506702:-1:exon

XP_015221342.1
type: Protein
SIO_000068: ncbiprotein

position:1506224:-1
position: 1506224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1532890:-1
position: 1532890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1532821-1532890:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1526251-1526382:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1525369-1525475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1524832-1524906:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1523036-1523232:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1521995-1522151:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1520212-1520325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1519052-1519142:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1518564-1518718:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1517527-1517632:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1515981-1516127:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1514615-1514788:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1513239-1513367:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1511966-1512115:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1511570-1511686:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1506224-1506702:-1:exon

sdf2l1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: sdf2l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1583148..1588781)
location: region:1583148-1588781:-1
so has part: feature:1583148-1588781:-1:exon
subclass of: SO_0000010

102683965
type: Gene
SIO_000068: ncbigene

position:1583148:-1
position: 1583148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1588781:-1
position: 1588781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1583148-1588781:-1:exon

sdf2l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: sdf2l1
product: stromal cell-derived factor 2-like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006640107.2
SIO_010081: sdf2l1
subclass of: SO_0000673
so part of: sdf2l1
location: complement(join(1583148..1584449,1586468..1586664,1588492..1588781))
location: region:1583148-1588781:-1
so has part: feature:1588492-1588781:-1:exon
so has part: feature:1586468-1586664:-1:exon
so has part: feature:1583148-1584449:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1588492-1588781:-1:exon

position:1588492:-1
position: 1588492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1586468-1586664:-1:exon

position:1586468:-1
position: 1586468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1586664:-1
position: 1586664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1583148-1584449:-1:exon

position:1584449:-1
position: 1584449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sdf2l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: sdf2l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stromal cell-derived factor 2-like protein 1
translation: MRLFRDFRDHIFMKLFLLLYILLQCEGRESEFSYVTCGSLVKLLNTRHNVRLHSHDVKYGSGSGQQSVTGVENSDDANSYWRIRGKPNAPCQRGAPVKCGQPIRLTHMNTGRNLHTHHFVSPLSANQEVSAFGENGEGDDLDVWAVQCSGAHWERDDAVRFKHVGTDVFLSVTGEQYGHPIKGQREVHGMAGTSHHAYWKTMEGVFIKPSSEPPRHDEL
SIO_010081: sdf2l1
subclass of: SO_0000673
so part of: sdf2l1
location: complement(join(1584171..1584449,1586468..1586664,1588492..1588675))
location: region:1584171-1588675:-1
so has part: feature:1588492-1588675:-1:exon
so has part: feature:1586468-1586664:-1:exon
so has part: feature:1584171-1584449:-1:exon

XP_006640170.2
type: Protein
SIO_000068: ncbiprotein

position:1584171:-1
position: 1584171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1588675:-1
position: 1588675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1588492-1588675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1586468-1586664:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1584171-1584449:-1:exon

LOC107079731
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079731
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1590439..1591966)
location: region:1590439-1591966:-1
so has part: feature:1590439-1591966:-1:exon
subclass of: SO_0000010

107079731
type: Gene
SIO_000068: ncbigene

position:1590439:-1
position: 1590439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1591966:-1
position: 1591966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1590439-1591966:-1:exon

LOC107079731
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079731
product: uncharacterized LOC107079731
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_015365905.1
SIO_010081: LOC107079731
subclass of: SO_0000673
so part of: LOC107079731
location: complement(join(1590439..1590944,1591105..1591966))
location: region:1590439-1591966:-1
so has part: feature:1591105-1591966:-1:exon
so has part: feature:1590439-1590944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1591105-1591966:-1:exon

position:1591105:-1
position: 1591105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1590439-1590944:-1:exon

position:1590944:-1
position: 1590944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107079731
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079731
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107079731
translation: MEPWHQSEETSPDSKPDATCSARNASEDAEKFIRRLVVEEGQRLMADKTLYRRPSWSPNIQGDQSRSKMAAPVLGHPHAEVKGFIEQHGVLDALEKVVSLLFHKLVEATNSDGHPVFKTDRGSDRYHEVESGEVADMLDREIRLCRLVKGLESVSTAAPDPEPTPAQIKKTKTRTPKERSERPPATHAQDVAPGGAACPCCEKNTAHPARETRKPAPKTAPPKAGKGRQNKAAEISENTAAWKKTGGGAAQQPSNDPRVSLRRILEEAYWNMNDWTKKGVELSHKLGILLTPSERSWQEVKTLGVKAELGSQGLLTEGPAPPHPAAAGACETPVQAEPEARLPGLDSAMAAQEAISSSHQLPAEKETAERPISPTDGAPFPQTEG
SIO_010081: LOC107079731
subclass of: SO_0000673
so part of: LOC107079731
location: complement(join(1590519..1590944,1591105..1591836))
location: region:1590519-1591836:-1
so has part: feature:1591105-1591836:-1:exon
so has part: feature:1590519-1590944:-1:exon

XP_015221391.1
type: Protein
SIO_000068: ncbiprotein

position:1590519:-1
position: 1590519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1591836:-1
position: 1591836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1591105-1591836:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1590519-1590944:-1:exon

ydjc
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ydjc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1592166..1601008
location: region:1592166-1601008:1
so has part: feature:1592166-1601008:1:exon
subclass of: SO_0000010

102684169
type: Gene
SIO_000068: ncbigene

position:1592166:1
position: 1592166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1601008:1
position: 1601008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1592166-1601008:1:exon

ydjc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ydjc
product: YdjC homolog (bacterial), transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015365911.1
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1592166..1592412,1592827..1592930,1594518..1594567,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1601008)
location: region:1592166-1601008:1
so has part: feature:1592166-1592412:1:exon
so has part: feature:1592827-1592930:1:exon
so has part: feature:1594518-1594567:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1601008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1592166-1592412:1:exon

position:1592412:1
position: 1592412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1592827-1592930:1:exon

position:1592827:1
position: 1592827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1592930:1
position: 1592930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1594518-1594567:1:exon

position:1594518:1
position: 1594518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1594567:1
position: 1594567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1595813-1595972:1:exon

position:1595813:1
position: 1595813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1595972:1
position: 1595972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1597282-1597381:1:exon

position:1597282:1
position: 1597282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1597381:1
position: 1597381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1598174-1598351:1:exon

position:1598174:1
position: 1598174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1598351:1
position: 1598351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1599838-1601008:1:exon

position:1599838:1
position: 1599838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ydjc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ydjc
product: YdjC homolog (bacterial), transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015365912.1
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1592166..1592412,1592827..1592930,1594521..1594567,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1601008)
location: region:1592166-1601008:1
so has part: feature:1592166-1592412:1:exon
so has part: feature:1592827-1592930:1:exon
so has part: feature:1594521-1594567:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1601008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1592166-1592412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1592827-1592930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1594521-1594567:1:exon

position:1594521:1
position: 1594521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1599838-1601008:1:exon

ydjc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ydjc
product: YdjC homolog (bacterial), transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015365915.1
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1592166..1592412,1594518..1594567,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1601008)
location: region:1592166-1601008:1
so has part: feature:1592166-1592412:1:exon
so has part: feature:1594518-1594567:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1601008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1592166-1592412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1594518-1594567:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1599838-1601008:1:exon

ydjc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ydjc
product: YdjC homolog (bacterial), transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015365909.1
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1592171..1592416,1592827..1592930,1594518..1594711,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1601008)
location: region:1592171-1601008:1
so has part: feature:1592171-1592416:1:exon
so has part: feature:1592827-1592930:1:exon
so has part: feature:1594518-1594711:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1601008:1:exon

position:1592171:1
position: 1592171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1592171-1592416:1:exon

position:1592416:1
position: 1592416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1592827-1592930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1594518-1594711:1:exon

position:1594711:1
position: 1594711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1599838-1601008:1:exon

ydjc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ydjc
product: YdjC homolog (bacterial), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015365906.1
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1592171..1592412,1592827..1592930,1594518..1594711,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1601008)
location: region:1592171-1601008:1
so has part: feature:1592171-1592412:1:exon
so has part: feature:1592827-1592930:1:exon
so has part: feature:1594518-1594711:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1601008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1592171-1592412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1592827-1592930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1594518-1594711:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1599838-1601008:1:exon

ydjc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ydjc
product: YdjC homolog (bacterial), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015365907.1
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1592171..1592412,1592827..1592930,1594521..1594711,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1601008)
location: region:1592171-1601008:1
so has part: feature:1592171-1592412:1:exon
so has part: feature:1592827-1592930:1:exon
so has part: feature:1594521-1594711:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1601008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1592171-1592412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1592827-1592930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1594521-1594711:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1599838-1601008:1:exon

ydjc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ydjc
product: YdjC homolog (bacterial), transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015365910.1
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1592171..1592412,1594521..1594711,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1601008)
location: region:1592171-1601008:1
so has part: feature:1592171-1592412:1:exon
so has part: feature:1594521-1594711:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1601008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1592171-1592412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1594521-1594711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1599838-1601008:1:exon

ydjc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ydjc
product: YdjC homolog (bacterial), transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015365913.1
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1593620..1593725,1594518..1594567,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1601008)
location: region:1593620-1601008:1
so has part: feature:1593620-1593725:1:exon
so has part: feature:1594518-1594567:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1601008:1:exon

position:1593620:1
position: 1593620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1593620-1593725:1:exon

position:1593725:1
position: 1593725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1594518-1594567:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1599838-1601008:1:exon

ydjc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ydjc
product: YdjC homolog (bacterial), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015365908.1
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1593622..1593725,1594518..1594711,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1601008)
location: region:1593622-1601008:1
so has part: feature:1593622-1593725:1:exon
so has part: feature:1594518-1594711:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1601008:1:exon

position:1593622:1
position: 1593622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1593622-1593725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1594518-1594711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1599838-1601008:1:exon

ydjc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ydjc
product: YdjC homolog (bacterial), transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015365914.1
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1593625..1593725,1594521..1594567,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1601008)
location: region:1593625-1601008:1
so has part: feature:1593625-1593725:1:exon
so has part: feature:1594521-1594567:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1601008:1:exon

position:1593625:1
position: 1593625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1593625-1593725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1594521-1594567:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1599838-1601008:1:exon

ydjc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ydjc
product: YdjC homolog (bacterial), transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006640108.2
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1593627..1593725,1594521..1594711,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1601008)
location: region:1593627-1601008:1
so has part: feature:1593627-1593725:1:exon
so has part: feature:1594521-1594711:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1601008:1:exon

position:1593627:1
position: 1593627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1593627-1593725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1594521-1594711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1599838-1601008:1:exon

ydjc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ydjc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate deacetylase isoform X1
translation: MPQPRIRLVVTGDDFGYCPRRNRGIVECFLSGAVSNVSLLVNAGSAKDGAELARRYSIPIGLHANLSEGLPICEQLQKGSSLVNHKGYFHGKMGFRKALRNGQLDMAEVELELRAQVTLFCDLTGHLPHHMDGHQHVHILPGVREVFACVMSDCQIRFTRVPLEPGLQACSWLPLHLRDFYTQVEQDARESVGVFLKHGIRWPDVYIGLTTMGRNMSVARIKTAISHALETPPAKENGMTSHRPELALVSGVSERDHVLTMELMVHPGYPSLPLEGGCGEGPDDFSQSSDRQHEMETLKDPRLLKFYKETKIQLCAFKDL
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1594548..1594711,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1600198)
location: region:1594548-1600198:1
so has part: feature:1594548-1594711:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1600198:1:exon

XP_006640171.1
type: Protein
SIO_000068: ncbiprotein

position:1594548:1
position: 1594548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1600198:1
position: 1600198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1594548-1594711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599838-1600198:1:exon

ydjc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ydjc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate deacetylase isoform X1
translation: MPQPRIRLVVTGDDFGYCPRRNRGIVECFLSGAVSNVSLLVNAGSAKDGAELARRYSIPIGLHANLSEGLPICEQLQKGSSLVNHKGYFHGKMGFRKALRNGQLDMAEVELELRAQVTLFCDLTGHLPHHMDGHQHVHILPGVREVFACVMSDCQIRFTRVPLEPGLQACSWLPLHLRDFYTQVEQDARESVGVFLKHGIRWPDVYIGLTTMGRNMSVARIKTAISHALETPPAKENGMTSHRPELALVSGVSERDHVLTMELMVHPGYPSLPLEGGCGEGPDDFSQSSDRQHEMETLKDPRLLKFYKETKIQLCAFKDL
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1594548..1594711,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1600198)
location: region:1594548-1600198:1
so has part: feature:1594548-1594711:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1600198:1:exon

XP_015221392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1594548-1594711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599838-1600198:1:exon

ydjc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ydjc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate deacetylase isoform X1
translation: MPQPRIRLVVTGDDFGYCPRRNRGIVECFLSGAVSNVSLLVNAGSAKDGAELARRYSIPIGLHANLSEGLPICEQLQKGSSLVNHKGYFHGKMGFRKALRNGQLDMAEVELELRAQVTLFCDLTGHLPHHMDGHQHVHILPGVREVFACVMSDCQIRFTRVPLEPGLQACSWLPLHLRDFYTQVEQDARESVGVFLKHGIRWPDVYIGLTTMGRNMSVARIKTAISHALETPPAKENGMTSHRPELALVSGVSERDHVLTMELMVHPGYPSLPLEGGCGEGPDDFSQSSDRQHEMETLKDPRLLKFYKETKIQLCAFKDL
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1594548..1594711,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1600198)
location: region:1594548-1600198:1
so has part: feature:1594548-1594711:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1600198:1:exon

XP_015221393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1594548-1594711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599838-1600198:1:exon

ydjc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ydjc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate deacetylase isoform X1
translation: MPQPRIRLVVTGDDFGYCPRRNRGIVECFLSGAVSNVSLLVNAGSAKDGAELARRYSIPIGLHANLSEGLPICEQLQKGSSLVNHKGYFHGKMGFRKALRNGQLDMAEVELELRAQVTLFCDLTGHLPHHMDGHQHVHILPGVREVFACVMSDCQIRFTRVPLEPGLQACSWLPLHLRDFYTQVEQDARESVGVFLKHGIRWPDVYIGLTTMGRNMSVARIKTAISHALETPPAKENGMTSHRPELALVSGVSERDHVLTMELMVHPGYPSLPLEGGCGEGPDDFSQSSDRQHEMETLKDPRLLKFYKETKIQLCAFKDL
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1594548..1594711,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1600198)
location: region:1594548-1600198:1
so has part: feature:1594548-1594711:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1600198:1:exon

XP_015221394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1594548-1594711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599838-1600198:1:exon

ydjc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ydjc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate deacetylase isoform X1
translation: MPQPRIRLVVTGDDFGYCPRRNRGIVECFLSGAVSNVSLLVNAGSAKDGAELARRYSIPIGLHANLSEGLPICEQLQKGSSLVNHKGYFHGKMGFRKALRNGQLDMAEVELELRAQVTLFCDLTGHLPHHMDGHQHVHILPGVREVFACVMSDCQIRFTRVPLEPGLQACSWLPLHLRDFYTQVEQDARESVGVFLKHGIRWPDVYIGLTTMGRNMSVARIKTAISHALETPPAKENGMTSHRPELALVSGVSERDHVLTMELMVHPGYPSLPLEGGCGEGPDDFSQSSDRQHEMETLKDPRLLKFYKETKIQLCAFKDL
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1594548..1594711,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1600198)
location: region:1594548-1600198:1
so has part: feature:1594548-1594711:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1600198:1:exon

XP_015221395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1594548-1594711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599838-1600198:1:exon

ydjc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ydjc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate deacetylase isoform X1
translation: MPQPRIRLVVTGDDFGYCPRRNRGIVECFLSGAVSNVSLLVNAGSAKDGAELARRYSIPIGLHANLSEGLPICEQLQKGSSLVNHKGYFHGKMGFRKALRNGQLDMAEVELELRAQVTLFCDLTGHLPHHMDGHQHVHILPGVREVFACVMSDCQIRFTRVPLEPGLQACSWLPLHLRDFYTQVEQDARESVGVFLKHGIRWPDVYIGLTTMGRNMSVARIKTAISHALETPPAKENGMTSHRPELALVSGVSERDHVLTMELMVHPGYPSLPLEGGCGEGPDDFSQSSDRQHEMETLKDPRLLKFYKETKIQLCAFKDL
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1594548..1594711,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1600198)
location: region:1594548-1600198:1
so has part: feature:1594548-1594711:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1600198:1:exon

XP_015221396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1594548-1594711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599838-1600198:1:exon

ydjc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ydjc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate deacetylase isoform X2
translation: MPQPRIRYSIPIGLHANLSEGLPICEQLQKGSSLVNHKGYFHGKMGFRKALRNGQLDMAEVELELRAQVTLFCDLTGHLPHHMDGHQHVHILPGVREVFACVMSDCQIRFTRVPLEPGLQACSWLPLHLRDFYTQVEQDARESVGVFLKHGIRWPDVYIGLTTMGRNMSVARIKTAISHALETPPAKENGMTSHRPELALVSGVSERDHVLTMELMVHPGYPSLPLEGGCGEGPDDFSQSSDRQHEMETLKDPRLLKFYKETKIQLCAFKDL
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1594548..1594567,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1600198)
location: region:1594548-1600198:1
so has part: feature:1594548-1594567:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1600198:1:exon

XP_015221397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1594548-1594567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599838-1600198:1:exon

ydjc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ydjc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate deacetylase isoform X2
translation: MPQPRIRYSIPIGLHANLSEGLPICEQLQKGSSLVNHKGYFHGKMGFRKALRNGQLDMAEVELELRAQVTLFCDLTGHLPHHMDGHQHVHILPGVREVFACVMSDCQIRFTRVPLEPGLQACSWLPLHLRDFYTQVEQDARESVGVFLKHGIRWPDVYIGLTTMGRNMSVARIKTAISHALETPPAKENGMTSHRPELALVSGVSERDHVLTMELMVHPGYPSLPLEGGCGEGPDDFSQSSDRQHEMETLKDPRLLKFYKETKIQLCAFKDL
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1594548..1594567,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1600198)
location: region:1594548-1600198:1
so has part: feature:1594548-1594567:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1600198:1:exon

XP_015221398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1594548-1594567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599838-1600198:1:exon

ydjc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ydjc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate deacetylase isoform X2
translation: MPQPRIRYSIPIGLHANLSEGLPICEQLQKGSSLVNHKGYFHGKMGFRKALRNGQLDMAEVELELRAQVTLFCDLTGHLPHHMDGHQHVHILPGVREVFACVMSDCQIRFTRVPLEPGLQACSWLPLHLRDFYTQVEQDARESVGVFLKHGIRWPDVYIGLTTMGRNMSVARIKTAISHALETPPAKENGMTSHRPELALVSGVSERDHVLTMELMVHPGYPSLPLEGGCGEGPDDFSQSSDRQHEMETLKDPRLLKFYKETKIQLCAFKDL
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1594548..1594567,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1600198)
location: region:1594548-1600198:1
so has part: feature:1594548-1594567:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1600198:1:exon

XP_015221399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1594548-1594567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599838-1600198:1:exon

ydjc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ydjc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate deacetylase isoform X2
translation: MPQPRIRYSIPIGLHANLSEGLPICEQLQKGSSLVNHKGYFHGKMGFRKALRNGQLDMAEVELELRAQVTLFCDLTGHLPHHMDGHQHVHILPGVREVFACVMSDCQIRFTRVPLEPGLQACSWLPLHLRDFYTQVEQDARESVGVFLKHGIRWPDVYIGLTTMGRNMSVARIKTAISHALETPPAKENGMTSHRPELALVSGVSERDHVLTMELMVHPGYPSLPLEGGCGEGPDDFSQSSDRQHEMETLKDPRLLKFYKETKIQLCAFKDL
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1594548..1594567,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1600198)
location: region:1594548-1600198:1
so has part: feature:1594548-1594567:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1600198:1:exon

XP_015221400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1594548-1594567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599838-1600198:1:exon

ydjc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ydjc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate deacetylase isoform X2
translation: MPQPRIRYSIPIGLHANLSEGLPICEQLQKGSSLVNHKGYFHGKMGFRKALRNGQLDMAEVELELRAQVTLFCDLTGHLPHHMDGHQHVHILPGVREVFACVMSDCQIRFTRVPLEPGLQACSWLPLHLRDFYTQVEQDARESVGVFLKHGIRWPDVYIGLTTMGRNMSVARIKTAISHALETPPAKENGMTSHRPELALVSGVSERDHVLTMELMVHPGYPSLPLEGGCGEGPDDFSQSSDRQHEMETLKDPRLLKFYKETKIQLCAFKDL
SIO_010081: ydjc
subclass of: SO_0000673
so part of: ydjc
location: join(1594548..1594567,1595813..1595972,1597282..1597381,1598174..1598351,1599838..1600198)
location: region:1594548-1600198:1
so has part: feature:1594548-1594567:1:exon
so has part: feature:1595813-1595972:1:exon
so has part: feature:1597282-1597381:1:exon
so has part: feature:1598174-1598351:1:exon
so has part: feature:1599838-1600198:1:exon

XP_015221401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1594548-1594567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1595813-1595972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1597282-1597381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1598174-1598351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599838-1600198:1:exon

ube2l3
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: ube2l3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1601510..1609013)
location: region:1601510-1609013:-1
so has part: feature:1601510-1609013:-1:exon
subclass of: SO_0000010

102684367
type: Gene
SIO_000068: ncbigene

position:1601510:-1
position: 1601510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1609013:-1
position: 1609013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1601510-1609013:-1:exon

ube2l3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: ube2l3
product: ubiquitin conjugating enzyme E2L 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 61 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_006640109.2
SIO_010081: ube2l3
subclass of: SO_0000673
so part of: ube2l3
location: complement(join(1601510..1604462,1604790..1604976,1606379..1606474,1608939..1609013))
location: region:1601510-1609013:-1
so has part: feature:1608939-1609013:-1:exon
so has part: feature:1606379-1606474:-1:exon
so has part: feature:1604790-1604976:-1:exon
so has part: feature:1601510-1604462:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1608939-1609013:-1:exon

position:1608939:-1
position: 1608939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1606379-1606474:-1:exon

position:1606379:-1
position: 1606379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1606474:-1
position: 1606474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1604790-1604976:-1:exon

position:1604790:-1
position: 1604790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1604976:-1
position: 1604976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1601510-1604462:-1:exon

position:1604462:-1
position: 1604462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ube2l3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: ube2l3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 L3
translation: MAASRRLHKELDEIRKSGMKNFRNIQVDDSNILTWQGLIVPDNPPYDKGAFRIEIIFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFFKNAEEFTKKHGEKRPVD
SIO_010081: ube2l3
subclass of: SO_0000673
so part of: ube2l3
location: complement(join(1604308..1604462,1604790..1604976,1606379..1606474,1608939..1608965))
location: region:1604308-1608965:-1
so has part: feature:1608939-1608965:-1:exon
so has part: feature:1606379-1606474:-1:exon
so has part: feature:1604790-1604976:-1:exon
so has part: feature:1604308-1604462:-1:exon

XP_006640172.1
type: Protein
SIO_000068: ncbiprotein

position:1604308:-1
position: 1604308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1608965:-1
position: 1608965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1608939-1608965:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1606379-1606474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1604790-1604976:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1604308-1604462:-1:exon

LOC107079704
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1621634..1622503)
location: region:1621634-1622503:-1
so has part: feature:1621634-1622503:-1:exon
subclass of: SO_0000010

107079704
type: Gene
SIO_000068: ncbigene

position:1621634:-1
position: 1621634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1622503:-1
position: 1622503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1621634-1622503:-1:exon

LOC107079704
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079704
product: G-protein coupled receptor 183-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365857.1
SIO_010081: LOC107079704
subclass of: SO_0000673
so part of: LOC107079704
location: complement(1621634..1622503)
location: region:1621634-1622503:-1
so has part: feature:1621634-1622503:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1621634-1622503:-1:exon

LOC107079704
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 183-like
translation: MVSLNLTVPLAVDFNEAADYFIFITNLLIATSAVLVAGSVVLGIICKKTLRRQNRFIFMLNTSISDTLSGVGGYYIGLFDVQEGFPSRNGTYYIVPSLLGVNILTIMFAQLDRFLAVVYPYTYNHYITRTIVIGVCVFCWFYTYLTLTVQNLLTVDAAAKLSAYGTLLLQAIIIVKVLMNVKLYLIAKYQIAREPPGPERDSKKESLRLIIVVVVCFLALWTPDFYYIILVQLTRSSYIFTNNASDPLSMMIRLSATCTPGLYIWGSPALREAVLKTVWGRVCPPLRKR
SIO_010081: LOC107079704
subclass of: SO_0000673
so part of: LOC107079704
location: complement(1621634..1622503)
location: region:1621634-1622503:-1
so has part: feature:1621634-1622503:-1:exon

XP_015221343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1621634-1622503:-1:exon

LOC107079705
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079705
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1632013..1632882)
location: region:1632013-1632882:-1
so has part: feature:1632013-1632882:-1:exon
subclass of: SO_0000010

107079705
type: Gene
SIO_000068: ncbigene

position:1632013:-1
position: 1632013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1632882:-1
position: 1632882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1632013-1632882:-1:exon

LOC107079705
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079705
product: G-protein coupled receptor 183-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365859.1
SIO_010081: LOC107079705
subclass of: SO_0000673
so part of: LOC107079705
location: complement(1632013..1632882)
location: region:1632013-1632882:-1
so has part: feature:1632013-1632882:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1632013-1632882:-1:exon

LOC107079705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079705
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 183-like
translation: MISLNLTVPLAVDFNEAADYFIFIINLLTATSSVLMAGSVLLGIICTKPLRNQNRFIFMLNTSISDTLSGVGGYYIGLFDVREGYPSKNGTYYIVPSLLGVNIWTILFSQVDRFFAVAYPYIYNRFVTRTVVIGVCVFCWFYTYLILTVQNLLTVDTAAKLSAYGTLLFQAIIIAKVLMTVKLYLIAKYQIAREPPGPERDSKKESLRLIIVVVVCFLGLWSPAFYYVIVVRMTGSTSVFTNNASDPFSVILRFTSTCTPGLYIWGSPALREAVLKTVWGRVCPPLRKR
SIO_010081: LOC107079705
subclass of: SO_0000673
so part of: LOC107079705
location: complement(1632013..1632882)
location: region:1632013-1632882:-1
so has part: feature:1632013-1632882:-1:exon

XP_015221345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1632013-1632882:-1:exon

LOC107079706
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1642973..1643842)
location: region:1642973-1643842:-1
so has part: feature:1642973-1643842:-1:exon
subclass of: SO_0000010

107079706
type: Gene
SIO_000068: ncbigene

position:1642973:-1
position: 1642973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1643842:-1
position: 1643842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1642973-1643842:-1:exon

LOC107079706
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079706
product: G-protein coupled receptor 183-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 27% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365860.1
SIO_010081: LOC107079706
subclass of: SO_0000673
so part of: LOC107079706
location: complement(1642973..1643842)
location: region:1642973-1643842:-1
so has part: feature:1642973-1643842:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1642973-1643842:-1:exon

LOC107079706
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 183-like
translation: MVSLNLTVPLAVDFTKAEDYFIFIVNLLIATSSVLLAGSVVLGIICKKSLRGQNRFIFMLNTSISDTLSGVGGYYIGLFDVQEGFPSRNGTYYIVSSLLGVNVLTIMSAQVDRFLAVVYPYAYNRYITRTAVIGVCVFCWFHTYFLITVQNLVTVDVAAKMSAYGTLSLQAIIIMKVLMNVKLYLIAKYQIAREPPGPERDSKKESLRLIIVVVVCFLALWTPDFYYIIVLQLTGSRYLFTNCSTDPFSIMIRLTSTCTPGLYIWGSPALREAVLKTAWGRVRPVVRKR
SIO_010081: LOC107079706
subclass of: SO_0000673
so part of: LOC107079706
location: complement(1642973..1643842)
location: region:1642973-1643842:-1
so has part: feature:1642973-1643842:-1:exon

XP_015221346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1642973-1643842:-1:exon

LOC107079707
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1648382..1649251)
location: region:1648382-1649251:-1
so has part: feature:1648382-1649251:-1:exon
subclass of: SO_0000010

107079707
type: Gene
SIO_000068: ncbigene

position:1648382:-1
position: 1648382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1649251:-1
position: 1649251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1648382-1649251:-1:exon

LOC107079707
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079707
product: G-protein coupled receptor 183-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365861.1
SIO_010081: LOC107079707
subclass of: SO_0000673
so part of: LOC107079707
location: complement(1648382..1649251)
location: region:1648382-1649251:-1
so has part: feature:1648382-1649251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1648382-1649251:-1:exon

LOC107079707
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 183-like
translation: MISLNLTVPLAVDFNDAADYFIFITNLLIATSAVLMAGSVVLGIICTKSLRGQNRFIFMLNTSISDTLTGLGGYYIGLFDVQEGYPSKNGTYYIVPSLLGVNILTIMSAQVDRFLAVAYPYTYSRYITRTVAIQLCFFAWFYTYFMLTVQNIVTIDVAKKVSAYGTLSLQAIIIAKVLMNVKLYLIAKYQIAREPPGPERDSKKESLRLIIVVVVCFLALWTPRFYYIIVVQMTRSRYMFKNNASDPLAMMIRFTSTCTPGLYIWGSPALREAVLKTVWGRVCPPLRKR
SIO_010081: LOC107079707
subclass of: SO_0000673
so part of: LOC107079707
location: complement(1648382..1649251)
location: region:1648382-1649251:-1
so has part: feature:1648382-1649251:-1:exon

XP_015221347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1648382-1649251:-1:exon

LOC107079708
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079708
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1653233..1654102)
location: region:1653233-1654102:-1
so has part: feature:1653233-1654102:-1:exon
subclass of: SO_0000010

107079708
type: Gene
SIO_000068: ncbigene

position:1653233:-1
position: 1653233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1654102:-1
position: 1654102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1653233-1654102:-1:exon

LOC107079708
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079708
product: allatostatin-A receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365862.1
SIO_010081: LOC107079708
subclass of: SO_0000673
so part of: LOC107079708
location: complement(1653233..1654102)
location: region:1653233-1654102:-1
so has part: feature:1653233-1654102:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1653233-1654102:-1:exon

LOC107079708
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079708
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: allatostatin-A receptor-like
translation: MISLNLTVPLAVDFNKAEDYFIFIVNLLVATSSVLVAGSVVLGIICKKSLRDQNRFIFMLNTSISDTLSGVGGYYIGLFDVQEGFPSRNGTYYIVPSLLGVNILTILSAQVDRFLAVVYPFTYSRYITRTVVIGVCVFCWFYTYFSLTVQNFVAVEVAANVSAYGTLLFQTIIIVKVLMNVKLYLIAKYQIAREPPGPERDSKKESLRLIIVVVVCFLALWCPYFYYMIVVQLARSTYMFANTARNPLSLMLRFSSTCTPGLYIWGSPALREAVLKTVWGRVCPPLRKR
SIO_010081: LOC107079708
subclass of: SO_0000673
so part of: LOC107079708
location: complement(1653233..1654102)
location: region:1653233-1654102:-1
so has part: feature:1653233-1654102:-1:exon

XP_015221348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1653233-1654102:-1:exon

LOC107079709
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<1654288..1654857)
location: region:1654288-1654857:-1
so has part: feature:1654288-1654857:-1:exon
subclass of: SO_0000010

107079709
type: Gene
SIO_000068: ncbigene

position:1654288:-1
position: 1654288
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:1654857:-1
position: 1654857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1654288-1654857:-1:exon

LOC107079709
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079709
product: G-protein coupled receptor 183-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_015365863.1
SIO_010081: LOC107079709
subclass of: SO_0000673
so part of: LOC107079709
location: complement(<1654288..1654857)
location: region:1654288-1654857:-1
so has part: feature:1654288-1654857:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1654288-1654857:-1:exon

LOC107079709
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 183-like
translation: MISLNLTVPLAVDFNKAEDYFIFIVNLLVATSSVLVAGSVVLGIICKKSLRDQNRFIFMLNTSISDTLSGVGGYYIGLFDVQEGFPSRNGTYYIVPSLLGVNILTILSAQVDRFLAVVYPFTYSRYITRTVVIGVCVFCWFYTYFSLTVQNFVAVEVAANVSAYGTLLFQTIIIVKVLMNVKLYLIAKYQ
SIO_010081: LOC107079709
subclass of: SO_0000673
so part of: LOC107079709
location: complement(<1654288..1654857)
location: region:1654288-1654857:-1
so has part: feature:1654288-1654857:-1:exon

XP_015221349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1654288-1654857:-1:exon

LOC107079710
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079710
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1661187..1661902)
location: region:1661187-1661902:-1
so has part: feature:1661187-1661902:-1:exon
subclass of: SO_0000010

107079710
type: Gene
SIO_000068: ncbigene

position:1661187:-1
position: 1661187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1661902:-1
position: 1661902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1661187-1661902:-1:exon

LOC107079710
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079710
product: glucose-dependent insulinotropic receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_015365864.1
SIO_010081: LOC107079710
subclass of: SO_0000673
so part of: LOC107079710
location: complement(join(1661187..1661190,1661403..1661902))
location: region:1661187-1661902:-1
so has part: feature:1661403-1661902:-1:exon
so has part: feature:1661187-1661190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1661403-1661902:-1:exon

position:1661403:-1
position: 1661403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1661187-1661190:-1:exon

position:1661190:-1
position: 1661190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107079710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079710
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-dependent insulinotropic receptor-like
translation: MISLNLTVPLAVDFNEAADYFIFIANLLIATSSVLVAVSVVLGIIFKKSLRAQNRFIFMLNTSICDTLSGVGGYYIGLFDVQEGYPSNNGTYSIVPSLLGVNILTILSAQVDRFLAVVYPYTYSRYISRTVVIGVCVFCWFYTYFSLTVQNLVTVEVAAKIKAYGTL
SIO_010081: LOC107079710
subclass of: SO_0000673
so part of: LOC107079710
location: complement(join(1661187..1661190,1661403..1661902))
location: region:1661187-1661902:-1
so has part: feature:1661403-1661902:-1:exon
so has part: feature:1661187-1661190:-1:exon

XP_015221350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1661403-1661902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1661187-1661190:-1:exon

LOC107079711
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1687418..1711228)
location: region:1687418-1711228:-1
so has part: feature:1687418-1711228:-1:exon

107079711
type: Gene
SIO_000068: ncbigene

position:1687418:-1
position: 1687418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1711228:-1
position: 1711228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1687418-1711228:-1:exon

LOC107079711
type: Exon
subclass of: SO_0000147
RO_0002162: 7918
gene: LOC107079711
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC107079711
subclass of: SO_0000673
so part of: LOC107079711
location: complement(1687418..1687777)
location: region:1687418-1687777:-1
so has part: feature:1687418-1687777:-1:exon

position:1687777:-1
position: 1687777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1687418-1687777:-1:exon

LOC107079711
type: Exon
subclass of: SO_0000147
RO_0002162: 7918
gene: LOC107079711
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC107079711
subclass of: SO_0000673
so part of: LOC107079711
location: complement(1710378..1711228)
location: region:1710378-1711228:-1
so has part: feature:1710378-1711228:-1:exon

position:1710378:-1
position: 1710378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1710378-1711228:-1:exon

LOC107079712
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079712
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1742024..1742893)
location: region:1742024-1742893:-1
so has part: feature:1742024-1742893:-1:exon
subclass of: SO_0000010

107079712
type: Gene
SIO_000068: ncbigene

position:1742024:-1
position: 1742024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1742893:-1
position: 1742893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1742024-1742893:-1:exon

LOC107079712
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079712
product: uncharacterized LOC107079712
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_015365867.1
SIO_010081: LOC107079712
subclass of: SO_0000673
so part of: LOC107079712
location: complement(1742024..1742893)
location: region:1742024-1742893:-1
so has part: feature:1742024-1742893:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1742024-1742893:-1:exon

LOC107079712
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079712
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107079712
translation: MVALNLTVPLAVDFSSAADYFIFLINLLVCTSSFLVAGSVVLGILNKKSLRAQNRFIFMLNTSISDTLTGLGGYYTGLFDVYESYPPRNGTYLIVPSLRGVNIWTIMFAQLDRFLAVAYPYTYNRYVTRNVVIGICVFCWAYTYLFITIQYHITIEQSTRMYAYATLSFQVIVTAKVALTIKLYLIAKYQIAREPPGPERDSKKESLRLIIVVVVCFLTLWSPQLYYIIVVHATGSRYMFRNNANDPLGLLVRFTATSTPGLYIWGSPALKESVLKTVWGRVCPLLRRR
SIO_010081: LOC107079712
subclass of: SO_0000673
so part of: LOC107079712
location: complement(1742024..1742893)
location: region:1742024-1742893:-1
so has part: feature:1742024-1742893:-1:exon

XP_015221353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1742024-1742893:-1:exon

LOC107079713
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1748322..1749191)
location: region:1748322-1749191:-1
so has part: feature:1748322-1749191:-1:exon
subclass of: SO_0000010

107079713
type: Gene
SIO_000068: ncbigene

position:1748322:-1
position: 1748322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1749191:-1
position: 1749191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1748322-1749191:-1:exon

LOC107079713
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079713
product: G-protein coupled receptor 183-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365868.1
SIO_010081: LOC107079713
subclass of: SO_0000673
so part of: LOC107079713
location: complement(1748322..1749191)
location: region:1748322-1749191:-1
so has part: feature:1748322-1749191:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1748322-1749191:-1:exon

LOC107079713
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 183-like
translation: MVSLNLTVPLAVDFNDAEDYFIFITNLLIATTSFLVAGSVVLGIMCKKELRAQNRFIFMLNTSISDTLTGLGGYYIGLFDVQEGYPSKNGTYFILPSLLGVNILTIMSAQVDRFLAVVYPYTYNRYVSRTVVIGVCVSCWFYTYFFLLVQNLITIEMAARMNAYGILTMQIIIILKVLLNVKLYLIAKYQIAREPPGPQRDSKKESLRLIIVVVVCFLALWTPRFYYIIVVQVTRSRYMFKNNASDPFSMMIRFTATCTPGLYIWGSPALREAVLKTVWGRVCPPLRKR
SIO_010081: LOC107079713
subclass of: SO_0000673
so part of: LOC107079713
location: complement(1748322..1749191)
location: region:1748322-1749191:-1
so has part: feature:1748322-1749191:-1:exon

XP_015221354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1748322-1749191:-1:exon

LOC107079714
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079714
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1754122..1756512)
location: region:1754122-1756512:-1
so has part: feature:1754122-1756512:-1:exon

107079714
type: Gene
SIO_000068: ncbigene

position:1754122:-1
position: 1754122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756512:-1
position: 1756512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1754122-1756512:-1:exon

LOC107079714
type: Exon
subclass of: SO_0000147
RO_0002162: 7918
gene: LOC107079714
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC107079714
subclass of: SO_0000673
so part of: LOC107079714
location: complement(1754122..1754227)
location: region:1754122-1754227:-1
so has part: feature:1754122-1754227:-1:exon

position:1754227:-1
position: 1754227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1754122-1754227:-1:exon

LOC107079714
type: Exon
subclass of: SO_0000147
RO_0002162: 7918
gene: LOC107079714
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC107079714
subclass of: SO_0000673
so part of: LOC107079714
location: complement(1754533..1754599)
location: region:1754533-1754599:-1
so has part: feature:1754533-1754599:-1:exon

position:1754533:-1
position: 1754533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1754599:-1
position: 1754599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1754533-1754599:-1:exon

LOC107079714
type: Exon
subclass of: SO_0000147
RO_0002162: 7918
gene: LOC107079714
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC107079714
subclass of: SO_0000673
so part of: LOC107079714
location: complement(1755840..1756512)
location: region:1755840-1756512:-1
so has part: feature:1755840-1756512:-1:exon

position:1755840:-1
position: 1755840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1755840-1756512:-1:exon

LOC107079715
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1762236..1764292)
location: region:1762236-1764292:-1
so has part: feature:1762236-1764292:-1:exon
subclass of: SO_0000010

107079715
type: Gene
SIO_000068: ncbigene

position:1762236:-1
position: 1762236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1764292:-1
position: 1764292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1762236-1764292:-1:exon

LOC107079715
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079715
product: allatostatin-A receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365869.1
SIO_010081: LOC107079715
subclass of: SO_0000673
so part of: LOC107079715
location: complement(join(1762236..1762286,1763426..1764292))
location: region:1762236-1764292:-1
so has part: feature:1763426-1764292:-1:exon
so has part: feature:1762236-1762286:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1763426-1764292:-1:exon

position:1763426:-1
position: 1763426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1762236-1762286:-1:exon

position:1762286:-1
position: 1762286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107079715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: allatostatin-A receptor-like
translation: MVSLNLTVPLAVDFTETADYFIFIANLLIATSSVLVAGSVVLGIIWNKTLRAQNRFIFMLNTSISDTLSGVGGYYIGLFDVQEGYPSRNGTYYIVPSLMGVNILTILFSQVDRFLAVAHPYAYNRFVTRTVVIEVCFFAWFYTYFMLTIQNLLTVDVAAKIRAYSTLTFQAIIVLKVLLNVKLYLIAKYQIAREPPGPERDSKKESLRLIIVVVVCFLALWTPRFYYIIVAQIIGSRYMFRNYAGDPLSMMFRFTATCTPGLYIWGSPALREAVLKTVWGRVCPPPRKKTTGQSSLSITQMTVNQ
SIO_010081: LOC107079715
subclass of: SO_0000673
so part of: LOC107079715
location: complement(join(1762236..1762286,1763426..1764292))
location: region:1762236-1764292:-1
so has part: feature:1763426-1764292:-1:exon
so has part: feature:1762236-1762286:-1:exon

XP_015221355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1763426-1764292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1762236-1762286:-1:exon

LOC107079716
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1772026..1773363)
location: region:1772026-1773363:-1
so has part: feature:1772026-1773363:-1:exon
subclass of: SO_0000010

107079716
type: Gene
SIO_000068: ncbigene

position:1772026:-1
position: 1772026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1773363:-1
position: 1773363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1772026-1773363:-1:exon

LOC107079716
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079716
product: G-protein coupled receptor 183-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365870.1
SIO_010081: LOC107079716
subclass of: SO_0000673
so part of: LOC107079716
location: complement(join(1772026..1772095,1772498..1773363))
location: region:1772026-1773363:-1
so has part: feature:1772498-1773363:-1:exon
so has part: feature:1772026-1772095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1772498-1773363:-1:exon

position:1772498:-1
position: 1772498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1772026-1772095:-1:exon

position:1772095:-1
position: 1772095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107079716
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 183-like
translation: MISLNLTVPLAVDFNDAADYLIFIANLLIATSAVLVAGSVVLGIICKRSLRAQNRFIFMLNTSVSDTLSGVGGYYIGLFDVQEGYASSNDTYYIVPMLLSVNIMTILFSQVDRFLAVAYPFVYTRFITRTVVIEVCFFAWFYTYLLLTILNLVTFEVVTKIRAYSVLTLQAIIIAKVLLNVKLYLIAKYQIAREPPGPERDSKKESLRLIIVVVVCFLALWSPRFYYIMVLQMTGSRYRFRNYANDPFSMMLRFTSTSTPGLYIWGSPALREAVLKTVWGRVCPPLKKRLVSDYERKSNHSEGIPCVTKVN
SIO_010081: LOC107079716
subclass of: SO_0000673
so part of: LOC107079716
location: complement(join(1772026..1772095,1772498..1773363))
location: region:1772026-1773363:-1
so has part: feature:1772498-1773363:-1:exon
so has part: feature:1772026-1772095:-1:exon

XP_015221356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1772498-1773363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1772026-1772095:-1:exon

LOC107079717
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079717
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1776407..1777276)
location: region:1776407-1777276:-1
so has part: feature:1776407-1777276:-1:exon
subclass of: SO_0000010

107079717
type: Gene
SIO_000068: ncbigene

position:1776407:-1
position: 1776407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1777276:-1
position: 1777276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1776407-1777276:-1:exon

LOC107079717
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079717
product: G-protein coupled receptor 183-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365871.1
SIO_010081: LOC107079717
subclass of: SO_0000673
so part of: LOC107079717
location: complement(1776407..1777276)
location: region:1776407-1777276:-1
so has part: feature:1776407-1777276:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1776407-1777276:-1:exon

LOC107079717
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079717
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 183-like
translation: MTSLNLTVPLAVDFNDAADYFIFIANLLIATSAVLVAGSVVLGILCKKTLRGQNRFIFMLNTSISDTLSGLGGYYIGLFDVQEGFPSRNGTYYILPSLLGVNILTIFFSQVDRFLAVVYPYAYNRFITRTVVIEVCFFAWFYTYLMLTIQNLVTVQVAAQIRSYSTLTFQAIIILKVLLNVKLYLIAKYQIARDPPGPERDSKKESLRLIIVVVVCFLALWTPRFYCIIVFQMIRSRYMFDNNASDPLSMMLRFTATCTPGLYIWGSPALREAVLKTVWGRVCPPLRKR
SIO_010081: LOC107079717
subclass of: SO_0000673
so part of: LOC107079717
location: complement(1776407..1777276)
location: region:1776407-1777276:-1
so has part: feature:1776407-1777276:-1:exon

XP_015221357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1776407-1777276:-1:exon

LOC107079718
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079718
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<1799563..1800195)
location: region:1799563-1800195:-1
so has part: feature:1799563-1800195:-1:exon
subclass of: SO_0000010

107079718
type: Gene
SIO_000068: ncbigene

position:1799563:-1
position: 1799563
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:1800195:-1
position: 1800195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1799563-1800195:-1:exon

LOC107079718
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079718
product: G-protein coupled receptor 183-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365873.1
SIO_010081: LOC107079718
subclass of: SO_0000673
so part of: LOC107079718
location: complement(<1799563..1800195)
location: region:1799563-1800195:-1
so has part: feature:1799563-1800195:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1799563-1800195:-1:exon

LOC107079718
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079718
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 183-like
translation: MISLNLTVPLAVDFSDAADYFIFITNLLIATSAVLVAGSVVLVILCKKSLRAQNRFIFMLNTSISDTLSGVGGYYIGLFDVPQGYPPSYSTYYIVHSLPGVNIMTILFSQVDRFLAVVYPYTYNRYVSRTVVIEVCFFAWFYTYVIMLTILNLVTLEVLAEIRAYSVLTLQAVIIAKVLMNVKLYLIAKYQISREPPGPERDSKKESLRLI
SIO_010081: LOC107079718
subclass of: SO_0000673
so part of: LOC107079718
location: complement(<1799563..1800195)
location: region:1799563-1800195:-1
so has part: feature:1799563-1800195:-1:exon

XP_015221359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1799563-1800195:-1:exon

LOC107079719
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079719
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1802771..1804863)
location: region:1802771-1804863:-1
so has part: feature:1802771-1804863:-1:exon
subclass of: SO_0000010

107079719
type: Gene
SIO_000068: ncbigene

position:1802771:-1
position: 1802771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1804863:-1
position: 1804863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1802771-1804863:-1:exon

LOC107079719
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079719
product: uncharacterized LOC107079719
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_015365874.1
SIO_010081: LOC107079719
subclass of: SO_0000673
so part of: LOC107079719
location: complement(join(1802771..1802800,1804291..1804863))
location: region:1802771-1804863:-1
so has part: feature:1804291-1804863:-1:exon
so has part: feature:1802771-1802800:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1804291-1804863:-1:exon

position:1804291:-1
position: 1804291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1802771-1802800:-1:exon

position:1802800:-1
position: 1802800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107079719
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079719
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107079719
translation: MISLNLTVPLAVDFNEAEDYFIFIANLLIATSSFLMAGSVMVGIICKNELRAQNRFIFMLNTSISDTLSGVGGYYIGLFDVYEGYPSRNGTYYIVPSLLGVNILTILFAQFDRFIAVVYPYVYNRYASRTVIIEVCLFCWFYTYLIVAIQNVVTIDLAAKVSAYGTLLLQAIIIVKVMLNVKLYLIAKYQINETGKYPVR
SIO_010081: LOC107079719
subclass of: SO_0000673
so part of: LOC107079719
location: complement(join(1802771..1802800,1804291..1804863))
location: region:1802771-1804863:-1
so has part: feature:1804291-1804863:-1:exon
so has part: feature:1802771-1802800:-1:exon

XP_015221360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1804291-1804863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1802771-1802800:-1:exon

LOC107079720
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079720
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1807948..1808817)
location: region:1807948-1808817:-1
so has part: feature:1807948-1808817:-1:exon
subclass of: SO_0000010

107079720
type: Gene
SIO_000068: ncbigene

position:1807948:-1
position: 1807948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808817:-1
position: 1808817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1807948-1808817:-1:exon

LOC107079720
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079720
product: G-protein coupled receptor 183-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 28% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365875.1
SIO_010081: LOC107079720
subclass of: SO_0000673
so part of: LOC107079720
location: complement(1807948..1808817)
location: region:1807948-1808817:-1
so has part: feature:1807948-1808817:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1807948-1808817:-1:exon

LOC107079720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079720
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 183-like
translation: MISLNLTVPLAVDFNDAADYFIFITNLLIATSSVLIAVSVVLGILCKKSLRAQNRFIFMLNTSISDTLSGLGGYYIGLFDVQEGYPSRNGTYYIVPSLLGVNIQTIMVAQVDRFLAVVYPYVYNRYVTRTVVIQLCVFCWFYTYFFLMVQNLITVEMAAKMSVYGTLALQAIIIAKVMLNVKLYLIAKYQIAREPPGPERDSKKESLRLIIVVVVCFLALWTPRFYYLIVVQLTRSRYIFTNNASDPLSMMIRFTSTCTPGLYIWGSPALREAVLKTVWGRVCPPLRKR
SIO_010081: LOC107079720
subclass of: SO_0000673
so part of: LOC107079720
location: complement(1807948..1808817)
location: region:1807948-1808817:-1
so has part: feature:1807948-1808817:-1:exon

XP_015221361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1807948-1808817:-1:exon

LOC107079721
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: LOC107079721
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1826171..1827092)
location: region:1826171-1827092:-1
so has part: feature:1826171-1827092:-1:exon
subclass of: SO_0000010

107079721
type: Gene
SIO_000068: ncbigene

position:1826171:-1
position: 1826171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1827092:-1
position: 1827092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1826171-1827092:-1:exon

LOC107079721
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: LOC107079721
product: G-protein coupled receptor 183-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015365876.1
SIO_010081: LOC107079721
subclass of: SO_0000673
so part of: LOC107079721
location: complement(1826171..1827092)
location: region:1826171-1827092:-1
so has part: feature:1826171-1827092:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1826171-1827092:-1:exon

LOC107079721
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: LOC107079721
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 183-like
translation: MVSFNLTVPLAVDFETPVDYLIFIINFIIATTSVIVAGSVVLGIVCKRALRAQNRFLFMLNTSVSDTLTGLSGYYVGLFDVYEGYPSRNGTYYILPAFLGVNILTMLLAQVDRFFAVSYPYAYNRYVSRTVIIEACAFCWFYTYLIILIQNVVPLETAAKVNAYSIVWLQVLILIKVLMTVKLYLIAKYQIAREPPGPERDSKKESLRLIIVVVVCFLALWSPRFYYILVVQMTRSRYIFKNNASDPLSMMIRFTATSTPGLYIWGSPALREVVLKTVWGRVCPVLRKR
SIO_010081: LOC107079721
subclass of: SO_0000673
so part of: LOC107079721
location: complement(1826171..1827040)
location: region:1826171-1827040:-1
so has part: feature:1826171-1827040:-1:exon

XP_015221362.1
type: Protein
SIO_000068: ncbiprotein

position:1827040:-1
position: 1827040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1826171-1827040:-1:exon

hic2
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: hic2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1834647..1928312
location: region:1834647-1928312:1
so has part: feature:1834647-1928312:1:exon
subclass of: SO_0000010

102684681
type: Gene
SIO_000068: ncbigene

position:1834647:1
position: 1834647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1928312:1
position: 1928312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1834647-1928312:1:exon

hic2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: hic2
product: hypermethylated in cancer 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015365884.1
SIO_010081: hic2
subclass of: SO_0000673
so part of: hic2
location: join(1834647..1834918,1835829..1836028,1858310..1860938,1872692..1872763,1876942..1877032,1913467..1913561,1923141..1923180,1924505..1924579,1925783..1927046)
location: region:1834647-1927046:1
so has part: feature:1834647-1834918:1:exon
so has part: feature:1835829-1836028:1:exon
so has part: feature:1858310-1860938:1:exon
so has part: feature:1872692-1872763:1:exon
so has part: feature:1876942-1877032:1:exon
so has part: feature:1913467-1913561:1:exon
so has part: feature:1923141-1923180:1:exon
so has part: feature:1924505-1924579:1:exon
so has part: feature:1925783-1927046:1:exon

position:1927046:1
position: 1927046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1834647-1834918:1:exon

position:1834918:1
position: 1834918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1835829-1836028:1:exon

position:1835829:1
position: 1835829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1836028:1
position: 1836028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1858310-1860938:1:exon

position:1858310:1
position: 1858310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1860938:1
position: 1860938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1872692-1872763:1:exon

position:1872692:1
position: 1872692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1872763:1
position: 1872763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1876942-1877032:1:exon

position:1876942:1
position: 1876942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1877032:1
position: 1877032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1913467-1913561:1:exon

position:1913467:1
position: 1913467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1913561:1
position: 1913561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1923141-1923180:1:exon

position:1923141:1
position: 1923141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1923180:1
position: 1923180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1924505-1924579:1:exon

position:1924505:1
position: 1924505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1924579:1
position: 1924579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1925783-1927046:1:exon

position:1925783:1
position: 1925783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hic2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: hic2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hypermethylated in cancer 2 protein isoform X1
translation: MMESFTGRYRKQVAQGCEERVEMELPNHAKQLLLQLNQQRAKGFLCDVIIVVENALFRAHKNILAASSIYFKSLVLHDNLINLDTDMVNPSVFRQILDFIYTGKLLSTDQTSDQNFNALLTAASYLQLHDLAALCRKKLKRNGKPLPSKPVTPSAGRPLRNQRLSSTPVIQNRYSGSRDGGKKQHGDLMKDKLSDDEVYVGSSTRESAKALKRAVGNSGSNGNISSVGDQELGLDLSKKSPSVCPAPDEVSPNNHQQESPQSASVSTANSASFEDSTTNPQSLDSGEPMDLGGGAGEETKPLPDTGQPRKSSRHVARKKEWPKKEAAFDGKGAGDEERPVPNGVIVGPKSSSGGSGGSSSSAGYSSEHSFQCKEEDAENGKENSDESGHSENESGHTSANYVYRQEGFEPVAYGDNLYVCIPCGKGFPSSEQLNAHVETHTEEELYIKEEDSYVKEEAEDLSTQNSAFGTESRPFKCSVCEKSYKDPATLRQHEKTHWLTRPFPCNICGKMFTQRGTMTRHMRSHLGLKPFACEECGMRFTRQYRLTEHMRVHSGEKPYECQLCGGKFTQQRNLISHLRMHTSPT
SIO_010081: hic2
subclass of: SO_0000673
so part of: hic2
location: join(1835993..1836028,1858310..1860031)
location: region:1835993-1860031:1
so has part: feature:1835993-1836028:1:exon
so has part: feature:1858310-1860031:1:exon

XP_015221370.1
type: Protein
SIO_000068: ncbiprotein

position:1835993:1
position: 1835993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1860031:1
position: 1860031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1835993-1836028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1858310-1860031:1:exon

hic2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: hic2
product: hypermethylated in cancer 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_006640111.2
SIO_010081: hic2
subclass of: SO_0000673
so part of: hic2
location: join(1840151..1840278,1858310..1860117)
location: region:1840151-1860117:1
so has part: feature:1840151-1840278:1:exon
so has part: feature:1858310-1860117:1:exon

position:1840151:1
position: 1840151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1860117:1
position: 1860117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1840151-1840278:1:exon

position:1840278:1
position: 1840278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1858310-1860117:1:exon

hic2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: hic2
product: hypermethylated in cancer 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015365885.1
SIO_010081: hic2
subclass of: SO_0000673
so part of: hic2
location: join(1840292..1841000,1858310..1860117)
location: region:1840292-1860117:1
so has part: feature:1840292-1841000:1:exon
so has part: feature:1858310-1860117:1:exon

position:1840292:1
position: 1840292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1840292-1841000:1:exon

position:1841000:1
position: 1841000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1858310-1860117:1:exon

hic2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: hic2
product: hypermethylated in cancer 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015365886.1
SIO_010081: hic2
subclass of: SO_0000673
so part of: hic2
location: join(1841633..1841653,1858310..1860117)
location: region:1841633-1860117:1
so has part: feature:1841633-1841653:1:exon
so has part: feature:1858310-1860117:1:exon

position:1841633:1
position: 1841633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1841633-1841653:1:exon

position:1841653:1
position: 1841653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1858310-1860117:1:exon

hic2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: hic2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hypermethylated in cancer 2 protein isoform X2
translation: MELPNHAKQLLLQLNQQRAKGFLCDVIIVVENALFRAHKNILAASSIYFKSLVLHDNLINLDTDMVNPSVFRQILDFIYTGKLLSTDQTSDQNFNALLTAASYLQLHDLAALCRKKLKRNGKPLPSKPVTPSAGRPLRNQRLSSTPVIQNRYSGSRDGGKKQHGDLMKDKLSDDEVYVGSSTRESAKALKRAVGNSGSNGNISSVGDQELGLDLSKKSPSVCPAPDEVSPNNHQQESPQSASVSTANSASFEDSTTNPQSLDSGEPMDLGGGAGEETKPLPDTGQPRKSSRHVARKKEWPKKEAAFDGKGAGDEERPVPNGVIVGPKSSSGGSGGSSSSAGYSSEHSFQCKEEDAENGKENSDESGHSENESGHTSANYVYRQEGFEPVAYGDNLYVCIPCGKGFPSSEQLNAHVETHTEEELYIKEEDSYVKEEAEDLSTQNSAFGTESRPFKCSVCEKSYKDPATLRQHEKTHWLTRPFPCNICGKMFTQRGTMTRHMRSHLGLKPFACEECGMRFTRQYRLTEHMRVHSGEKPYECQLCGGKFTQQRNLISHLRMHTSPT
SIO_010081: hic2
subclass of: SO_0000673
so part of: hic2
location: 1858340..1860031
location: region:1858340-1860031:1
so has part: feature:1858340-1860031:1:exon

XP_006640174.1
type: Protein
SIO_000068: ncbiprotein

position:1858340:1
position: 1858340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1858340-1860031:1:exon

hic2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: hic2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hypermethylated in cancer 2 protein isoform X2
translation: MELPNHAKQLLLQLNQQRAKGFLCDVIIVVENALFRAHKNILAASSIYFKSLVLHDNLINLDTDMVNPSVFRQILDFIYTGKLLSTDQTSDQNFNALLTAASYLQLHDLAALCRKKLKRNGKPLPSKPVTPSAGRPLRNQRLSSTPVIQNRYSGSRDGGKKQHGDLMKDKLSDDEVYVGSSTRESAKALKRAVGNSGSNGNISSVGDQELGLDLSKKSPSVCPAPDEVSPNNHQQESPQSASVSTANSASFEDSTTNPQSLDSGEPMDLGGGAGEETKPLPDTGQPRKSSRHVARKKEWPKKEAAFDGKGAGDEERPVPNGVIVGPKSSSGGSGGSSSSAGYSSEHSFQCKEEDAENGKENSDESGHSENESGHTSANYVYRQEGFEPVAYGDNLYVCIPCGKGFPSSEQLNAHVETHTEEELYIKEEDSYVKEEAEDLSTQNSAFGTESRPFKCSVCEKSYKDPATLRQHEKTHWLTRPFPCNICGKMFTQRGTMTRHMRSHLGLKPFACEECGMRFTRQYRLTEHMRVHSGEKPYECQLCGGKFTQQRNLISHLRMHTSPT
SIO_010081: hic2
subclass of: SO_0000673
so part of: hic2
location: 1858340..1860031
location: region:1858340-1860031:1
so has part: feature:1858340-1860031:1:exon

XP_015221371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1858340-1860031:1:exon

hic2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: hic2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hypermethylated in cancer 2 protein isoform X2
translation: MELPNHAKQLLLQLNQQRAKGFLCDVIIVVENALFRAHKNILAASSIYFKSLVLHDNLINLDTDMVNPSVFRQILDFIYTGKLLSTDQTSDQNFNALLTAASYLQLHDLAALCRKKLKRNGKPLPSKPVTPSAGRPLRNQRLSSTPVIQNRYSGSRDGGKKQHGDLMKDKLSDDEVYVGSSTRESAKALKRAVGNSGSNGNISSVGDQELGLDLSKKSPSVCPAPDEVSPNNHQQESPQSASVSTANSASFEDSTTNPQSLDSGEPMDLGGGAGEETKPLPDTGQPRKSSRHVARKKEWPKKEAAFDGKGAGDEERPVPNGVIVGPKSSSGGSGGSSSSAGYSSEHSFQCKEEDAENGKENSDESGHSENESGHTSANYVYRQEGFEPVAYGDNLYVCIPCGKGFPSSEQLNAHVETHTEEELYIKEEDSYVKEEAEDLSTQNSAFGTESRPFKCSVCEKSYKDPATLRQHEKTHWLTRPFPCNICGKMFTQRGTMTRHMRSHLGLKPFACEECGMRFTRQYRLTEHMRVHSGEKPYECQLCGGKFTQQRNLISHLRMHTSPT
SIO_010081: hic2
subclass of: SO_0000673
so part of: hic2
location: 1858340..1860031
location: region:1858340-1860031:1
so has part: feature:1858340-1860031:1:exon

XP_015221372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1858340-1860031:1:exon

hic2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7918
gene: hic2
product: hypermethylated in cancer 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001480640.1
SIO_010081: hic2
so part of: hic2
location: join(1922998..1923180,1923395..1923482,1924505..1924579,1925783..1925856,1928221..1928303)
location: region:1922998-1928303:1
so has part: feature:1922998-1923180:1:exon
so has part: feature:1923395-1923482:1:exon
so has part: feature:1924505-1924579:1:exon
so has part: feature:1925783-1925856:1:exon
so has part: feature:1928221-1928303:1:exon

position:1922998:1
position: 1922998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1928303:1
position: 1928303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1922998-1923180:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1923395-1923482:1:exon

position:1923395:1
position: 1923395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1923482:1
position: 1923482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1924505-1924579:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1925783-1925856:1:exon

position:1925856:1
position: 1925856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1928221-1928303:1:exon

position:1928221:1
position: 1928221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hic2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7918
gene: hic2
product: hypermethylated in cancer 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_001480639.1
SIO_010081: hic2
so part of: hic2
location: join(1922998..1923180,1924505..1924579,1925783..1925856,1928221..1928303)
location: region:1922998-1928303:1
so has part: feature:1922998-1923180:1:exon
so has part: feature:1924505-1924579:1:exon
so has part: feature:1925783-1925856:1:exon
so has part: feature:1928221-1928303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1922998-1923180:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1924505-1924579:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1925783-1925856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1928221-1928303:1:exon

hic2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7918
gene: hic2
product: hypermethylated in cancer 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001480641.1
SIO_010081: hic2
so part of: hic2
location: join(1925426..1925585,1925783..1925856,1928221..1928303)
location: region:1925426-1928303:1
so has part: feature:1925426-1925585:1:exon
so has part: feature:1925783-1925856:1:exon
so has part: feature:1928221-1928303:1:exon

position:1925426:1
position: 1925426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1925426-1925585:1:exon

position:1925585:1
position: 1925585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1925783-1925856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1928221-1928303:1:exon

pi4ka
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: pi4ka
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1926538..1971195)
location: region:1926538-1971195:-1
so has part: feature:1926538-1971195:-1:exon
subclass of: SO_0000010

102684884
type: Gene
SIO_000068: ncbigene

position:1926538:-1
position: 1926538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1971195:-1
position: 1971195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1926538-1971195:-1:exon

pi4ka
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: pi4ka
product: phosphatidylinositol 4-kinase, catalytic, alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_006640115.2
SIO_010081: pi4ka
subclass of: SO_0000673
so part of: pi4ka
location: complement(join(1926538..1927138,1927525..1927608,1927807..1927896,1928314..1928473,1928960..1929080,1929456..1929581,1930715..1930819,1931475..1931584,1931895..1931965,1932153..1932225,1932756..1932826,1935215..1935344,1935650..1935770,1936079..1936132,1936911..1937078,1937967..1938057,1938607..1938806,1938947..1939026,1939243..1939401,1941449..1941576,1941744..1941851,1942302..1942453,1942764..1942922,1944210..1944337,1944878..1945034,1945288..1945380,1948589..1948708,1949065..1949154,1949787..1949870,1950212..1950293,1950508..1950632,1951252..1951322,1951436..1951518,1952032..1952165,1952518..1952654,1953285..1953393,1960543..1960593,1961000..1961168,1961940..1962043,1962423..1962606,1962801..1962896,1963115..1963244,1963671..1963800,1964115..1964215,1964750..1964941,1965323..1965419,1965575..1965640,1966147..1966295,1967013..1967079,1967535..1967794,1968267..1968339,1968579..1968667,1969220..1969313,1969790..1969906,1971025..1971195))
location: region:1926538-1971195:-1
so has part: feature:1971025-1971195:-1:exon
so has part: feature:1969790-1969906:-1:exon
so has part: feature:1969220-1969313:-1:exon
so has part: feature:1968579-1968667:-1:exon
so has part: feature:1968267-1968339:-1:exon
so has part: feature:1967535-1967794:-1:exon
so has part: feature:1967013-1967079:-1:exon
so has part: feature:1966147-1966295:-1:exon
so has part: feature:1965575-1965640:-1:exon
so has part: feature:1965323-1965419:-1:exon
so has part: feature:1964750-1964941:-1:exon
so has part: feature:1964115-1964215:-1:exon
so has part: feature:1963671-1963800:-1:exon
so has part: feature:1963115-1963244:-1:exon
so has part: feature:1962801-1962896:-1:exon
so has part: feature:1962423-1962606:-1:exon
so has part: feature:1961940-1962043:-1:exon
so has part: feature:1961000-1961168:-1:exon
so has part: feature:1960543-1960593:-1:exon
so has part: feature:1953285-1953393:-1:exon
so has part: feature:1952518-1952654:-1:exon
so has part: feature:1952032-1952165:-1:exon
so has part: feature:1951436-1951518:-1:exon
so has part: feature:1951252-1951322:-1:exon
so has part: feature:1950508-1950632:-1:exon
so has part: feature:1950212-1950293:-1:exon
so has part: feature:1949787-1949870:-1:exon
so has part: feature:1949065-1949154:-1:exon
so has part: feature:1948589-1948708:-1:exon
so has part: feature:1945288-1945380:-1:exon
so has part: feature:1944878-1945034:-1:exon
so has part: feature:1944210-1944337:-1:exon
so has part: feature:1942764-1942922:-1:exon
so has part: feature:1942302-1942453:-1:exon
so has part: feature:1941744-1941851:-1:exon
so has part: feature:1941449-1941576:-1:exon
so has part: feature:1939243-1939401:-1:exon
so has part: feature:1938947-1939026:-1:exon
so has part: feature:1938607-1938806:-1:exon
so has part: feature:1937967-1938057:-1:exon
so has part: feature:1936911-1937078:-1:exon
so has part: feature:1936079-1936132:-1:exon
so has part: feature:1935650-1935770:-1:exon
so has part: feature:1935215-1935344:-1:exon
so has part: feature:1932756-1932826:-1:exon
so has part: feature:1932153-1932225:-1:exon
so has part: feature:1931895-1931965:-1:exon
so has part: feature:1931475-1931584:-1:exon
so has part: feature:1930715-1930819:-1:exon
so has part: feature:1929456-1929581:-1:exon
so has part: feature:1928960-1929080:-1:exon
so has part: feature:1928314-1928473:-1:exon
so has part: feature:1927807-1927896:-1:exon
so has part: feature:1927525-1927608:-1:exon
so has part: feature:1926538-1927138:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1971025-1971195:-1:exon

position:1971025:-1
position: 1971025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1969790-1969906:-1:exon

position:1969790:-1
position: 1969790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1969906:-1
position: 1969906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1969220-1969313:-1:exon

position:1969220:-1
position: 1969220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1969313:-1
position: 1969313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1968579-1968667:-1:exon

position:1968579:-1
position: 1968579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1968667:-1
position: 1968667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1968267-1968339:-1:exon

position:1968267:-1
position: 1968267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1968339:-1
position: 1968339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1967535-1967794:-1:exon

position:1967535:-1
position: 1967535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1967794:-1
position: 1967794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1967013-1967079:-1:exon

position:1967013:-1
position: 1967013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1967079:-1
position: 1967079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1966147-1966295:-1:exon

position:1966147:-1
position: 1966147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1966295:-1
position: 1966295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1965575-1965640:-1:exon

position:1965575:-1
position: 1965575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1965640:-1
position: 1965640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1965323-1965419:-1:exon

position:1965323:-1
position: 1965323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1965419:-1
position: 1965419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1964750-1964941:-1:exon

position:1964750:-1
position: 1964750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1964941:-1
position: 1964941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1964115-1964215:-1:exon

position:1964115:-1
position: 1964115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1964215:-1
position: 1964215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1963671-1963800:-1:exon

position:1963671:-1
position: 1963671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1963800:-1
position: 1963800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1963115-1963244:-1:exon

position:1963115:-1
position: 1963115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1963244:-1
position: 1963244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1962801-1962896:-1:exon

position:1962801:-1
position: 1962801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1962896:-1
position: 1962896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1962423-1962606:-1:exon

position:1962423:-1
position: 1962423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1962606:-1
position: 1962606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1961940-1962043:-1:exon

position:1961940:-1
position: 1961940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1962043:-1
position: 1962043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1961000-1961168:-1:exon

position:1961000:-1
position: 1961000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1961168:-1
position: 1961168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1960543-1960593:-1:exon

position:1960543:-1
position: 1960543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1960593:-1
position: 1960593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1953285-1953393:-1:exon

position:1953285:-1
position: 1953285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1953393:-1
position: 1953393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1952518-1952654:-1:exon

position:1952518:-1
position: 1952518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1952654:-1
position: 1952654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1952032-1952165:-1:exon

position:1952032:-1
position: 1952032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1952165:-1
position: 1952165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1951436-1951518:-1:exon

position:1951436:-1
position: 1951436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1951518:-1
position: 1951518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1951252-1951322:-1:exon

position:1951252:-1
position: 1951252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1951322:-1
position: 1951322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1950508-1950632:-1:exon

position:1950508:-1
position: 1950508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1950632:-1
position: 1950632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1950212-1950293:-1:exon

position:1950212:-1
position: 1950212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1950293:-1
position: 1950293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1949787-1949870:-1:exon

position:1949787:-1
position: 1949787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1949870:-1
position: 1949870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1949065-1949154:-1:exon

position:1949065:-1
position: 1949065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1949154:-1
position: 1949154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1948589-1948708:-1:exon

position:1948589:-1
position: 1948589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1948708:-1
position: 1948708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1945288-1945380:-1:exon

position:1945288:-1
position: 1945288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1945380:-1
position: 1945380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1944878-1945034:-1:exon

position:1944878:-1
position: 1944878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1945034:-1
position: 1945034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1944210-1944337:-1:exon

position:1944210:-1
position: 1944210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1944337:-1
position: 1944337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1942764-1942922:-1:exon

position:1942764:-1
position: 1942764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1942922:-1
position: 1942922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1942302-1942453:-1:exon

position:1942302:-1
position: 1942302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1942453:-1
position: 1942453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1941744-1941851:-1:exon

position:1941744:-1
position: 1941744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1941851:-1
position: 1941851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1941449-1941576:-1:exon

position:1941449:-1
position: 1941449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1941576:-1
position: 1941576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1939243-1939401:-1:exon

position:1939243:-1
position: 1939243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1939401:-1
position: 1939401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1938947-1939026:-1:exon

position:1938947:-1
position: 1938947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1939026:-1
position: 1939026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1938607-1938806:-1:exon

position:1938607:-1
position: 1938607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1938806:-1
position: 1938806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1937967-1938057:-1:exon

position:1937967:-1
position: 1937967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1938057:-1
position: 1938057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1936911-1937078:-1:exon

position:1936911:-1
position: 1936911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1937078:-1
position: 1937078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1936079-1936132:-1:exon

position:1936079:-1
position: 1936079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1936132:-1
position: 1936132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1935650-1935770:-1:exon

position:1935650:-1
position: 1935650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1935770:-1
position: 1935770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1935215-1935344:-1:exon

position:1935215:-1
position: 1935215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1935344:-1
position: 1935344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1932756-1932826:-1:exon

position:1932756:-1
position: 1932756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1932826:-1
position: 1932826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:1932153-1932225:-1:exon

position:1932153:-1
position: 1932153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1932225:-1
position: 1932225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1931895-1931965:-1:exon

position:1931895:-1
position: 1931895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1931965:-1
position: 1931965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:1931475-1931584:-1:exon

position:1931475:-1
position: 1931475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1931584:-1
position: 1931584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:1930715-1930819:-1:exon

position:1930715:-1
position: 1930715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1930819:-1
position: 1930819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:1929456-1929581:-1:exon

position:1929456:-1
position: 1929456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1929581:-1
position: 1929581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:1928960-1929080:-1:exon

position:1928960:-1
position: 1928960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1929080:-1
position: 1929080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:1928314-1928473:-1:exon

position:1928314:-1
position: 1928314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1928473:-1
position: 1928473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:1927807-1927896:-1:exon

position:1927807:-1
position: 1927807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1927896:-1
position: 1927896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:1927525-1927608:-1:exon

position:1927525:-1
position: 1927525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1927608:-1
position: 1927608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:1926538-1927138:-1:exon

position:1927138:-1
position: 1927138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pi4ka
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: pi4ka
product: phosphatidylinositol 4-kinase, catalytic, alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_006640117.2
SIO_010081: pi4ka
subclass of: SO_0000673
so part of: pi4ka
location: complement(join(1926538..1927138,1927525..1927608,1927807..1927896,1928314..1928473,1928960..1929080,1929456..1929581,1930715..1930819,1931475..1931584,1931895..1931965,1932153..1932225,1932756..1932826,1935215..1935344,1935650..1935770,1936079..1936132,1936911..1937078,1937967..1938057,1938607..1938806,1938947..1939026,1939243..1939401,1941449..1941576,1941744..1941851,1942302..1942453,1942764..1942922,1944210..1944337,1944878..1945034,1945288..1945380,1946898..1946912,1948589..1948708,1949065..1949154,1949787..1949870,1950212..1950293,1950508..1950632,1951252..1951322,1951436..1951518,1952032..1952165,1952518..1952654,1953285..1953393,1960543..1960593,1961000..1961168,1961940..1962043,1962423..1962606,1962801..1962896,1963115..1963244,1963671..1963800,1964115..1964215,1964750..1964941,1965323..1965419,1965575..1965640,1966147..1966295,1967013..1967079,1967535..1967794,1968267..1968339,1968579..1968667,1969220..1969313,1969790..1969906,1971025..1971195))
location: region:1926538-1971195:-1
so has part: feature:1971025-1971195:-1:exon
so has part: feature:1969790-1969906:-1:exon
so has part: feature:1969220-1969313:-1:exon
so has part: feature:1968579-1968667:-1:exon
so has part: feature:1968267-1968339:-1:exon
so has part: feature:1967535-1967794:-1:exon
so has part: feature:1967013-1967079:-1:exon
so has part: feature:1966147-1966295:-1:exon
so has part: feature:1965575-1965640:-1:exon
so has part: feature:1965323-1965419:-1:exon
so has part: feature:1964750-1964941:-1:exon
so has part: feature:1964115-1964215:-1:exon
so has part: feature:1963671-1963800:-1:exon
so has part: feature:1963115-1963244:-1:exon
so has part: feature:1962801-1962896:-1:exon
so has part: feature:1962423-1962606:-1:exon
so has part: feature:1961940-1962043:-1:exon
so has part: feature:1961000-1961168:-1:exon
so has part: feature:1960543-1960593:-1:exon
so has part: feature:1953285-1953393:-1:exon
so has part: feature:1952518-1952654:-1:exon
so has part: feature:1952032-1952165:-1:exon
so has part: feature:1951436-1951518:-1:exon
so has part: feature:1951252-1951322:-1:exon
so has part: feature:1950508-1950632:-1:exon
so has part: feature:1950212-1950293:-1:exon
so has part: feature:1949787-1949870:-1:exon
so has part: feature:1949065-1949154:-1:exon
so has part: feature:1948589-1948708:-1:exon
so has part: feature:1946898-1946912:-1:exon
so has part: feature:1945288-1945380:-1:exon
so has part: feature:1944878-1945034:-1:exon
so has part: feature:1944210-1944337:-1:exon
so has part: feature:1942764-1942922:-1:exon
so has part: feature:1942302-1942453:-1:exon
so has part: feature:1941744-1941851:-1:exon
so has part: feature:1941449-1941576:-1:exon
so has part: feature:1939243-1939401:-1:exon
so has part: feature:1938947-1939026:-1:exon
so has part: feature:1938607-1938806:-1:exon
so has part: feature:1937967-1938057:-1:exon
so has part: feature:1936911-1937078:-1:exon
so has part: feature:1936079-1936132:-1:exon
so has part: feature:1935650-1935770:-1:exon
so has part: feature:1935215-1935344:-1:exon
so has part: feature:1932756-1932826:-1:exon
so has part: feature:1932153-1932225:-1:exon
so has part: feature:1931895-1931965:-1:exon
so has part: feature:1931475-1931584:-1:exon
so has part: feature:1930715-1930819:-1:exon
so has part: feature:1929456-1929581:-1:exon
so has part: feature:1928960-1929080:-1:exon
so has part: feature:1928314-1928473:-1:exon
so has part: feature:1927807-1927896:-1:exon
so has part: feature:1927525-1927608:-1:exon
so has part: feature:1926538-1927138:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1971025-1971195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1969790-1969906:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1969220-1969313:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1968579-1968667:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1968267-1968339:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1967535-1967794:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1967013-1967079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1966147-1966295:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1965575-1965640:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1965323-1965419:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1964750-1964941:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1964115-1964215:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1963671-1963800:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1963115-1963244:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1962801-1962896:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1962423-1962606:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1961940-1962043:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1961000-1961168:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1960543-1960593:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1953285-1953393:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1952518-1952654:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1952032-1952165:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1951436-1951518:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1951252-1951322:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1950508-1950632:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1950212-1950293:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1949787-1949870:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1949065-1949154:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1948589-1948708:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1946898-1946912:-1:exon

position:1946898:-1
position: 1946898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1946912:-1
position: 1946912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1945288-1945380:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1944878-1945034:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1944210-1944337:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1942764-1942922:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1942302-1942453:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1941744-1941851:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1941449-1941576:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1939243-1939401:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1938947-1939026:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1938607-1938806:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1937967-1938057:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1936911-1937078:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1936079-1936132:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1935650-1935770:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1935215-1935344:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1932756-1932826:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1932153-1932225:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1931895-1931965:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1931475-1931584:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1930715-1930819:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1929456-1929581:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1928960-1929080:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1928314-1928473:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1927807-1927896:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1927525-1927608:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1926538-1927138:-1:exon

pi4ka
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: pi4ka
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-kinase alpha isoform X2
translation: MSVKGGGSRGFYFNTVLSLARSLAAHRPAPADKVQKLQCMCPVDLRGIYQLDERRRGAVIALGIFLVESGLQHKESIVTYLLGLLKGLPRVQWIEESTGRKGKESLPIAENFSFCLVTLLSDVAQRDASSRGQILEAVMDAMQVLLEMCQTPESQDKEYLCRYAVPCLLGVARAFGRYSNTDESLLSKLCPRVAPQSLRVADELEGVRRRSFNDFRSILPSSLLTVCQGDSLKRKTSSVSSVSQASPERGGTLPSSPAGLTAQYFEGSYLPDGSAVDPDYYFSTISSSFSVSPLFTGHSSKEFDIPLEVLRQLLHMVKQIVADSVLKTLDSVMTEVLELNPNIDLCYKTFSDPLYVAMFKMLRDTLYYMRDLQTSFVKEVHDFVLEQFSISQSELQKILHDVEHVHSELNPLKLRCQASAACVDLMVWAVKEEQGAENLCTKLSEKLQSKTSSKVIIAHMPLLICCLQGLGRLCERFPVVAHPVTTSLRDFLVVPSPVLVKLYKYHSQYHTGTGEIKISVTNEHSQSTLNVLSNKKSQPSMYEQLRDISIDNICRCLKAGLTMDPVIVEAFLASLSNRLYISQENDKDAHLIPDHTIRALGHIAVALRDTPKVMEPILQILQQKFCQPPSQLDVLIIDQLGCMVITGNQYIYQEVWNLFQQISVKASSVVYSATKDHRDHGYRHCSLAVINALANIAANLQGEQMVDELLVNLLELFVQLGLEGKRASERASEKGPALKASSSAGNLGVLIPVIAVLTRRLPPIKEAKPRLQKLFRDFWLYSVVMGFAVEGSGLWPEEWYEGVCEIASKSPLLTFPSGEPLRSELQYNSALKNDTVTPAELNDLRSTIINLLDPPPEVAALINKLDFAMSTYLLSVYRLEYMRVLRSMDPDRFQVMFRYFEDKAIQKDKSGMMQCVIAVGDKVFEVFLQMMAEKPKTKEHEEELERHAQFLLVNFNHTHKRIRRVADKYLSGLAETFPHLLWSGRVLKTMLDILQTLSLSLSADIHKDPPYYDIPDTPYRITVPDTYEARESIVKDFAARCGEILKEAMKWAPSVTKSHLQEYLNKHQNWVSGLSQHTGLAMATESILHFAGYNRQSTTLGTTQLTERPACVKKDYSNFMASLNLRNRYAGEVSGMIQFSEATHSTSDLNKLVIKQMSDALVAAQPEAYTQAMFKLTALLISSKDCDPQLLHHLCWAPLKMFTEHGMEAAIACWEWFLAARNSVEVPFMREMAGAWHMTVELKMGLFSEMQKEADPLAASEESQPIPRPPEVTPHYIWIEFLVQRFEIAKYCSADQVEIFASLLQRSLSLNVGGSKCCLNRHVAAIGPRFRLLTLGLALLHADVVTNATIRNVLREKIYSTVFDYFSIAPKFPTQGEKRLREDISIMIKFYASMLSDKKYLAASQLVPPDNQDPSVNSLSVMTVTDSRNNLDVAVGSRQQTTQGWINTYPLSSGMSTISKKSGLSKKSNRGTQLHKYYMKRRTLLLALLASEIERLTTWYNPLSTQELAISTEQSVETSIANWRSKYISLSEKQWKDNVNLAWSISPYLALQLPARFKNAEAIVTEVTRLVRLDPGAVSDVPEAVKYLVTWHTIDADSPELSHILCWAPTDPPTGLSYFSSMYPPHPLTAQYGVKVLRSFPPDAILFYIPQIVQSLRYDKMGYIREYILWAAAKSQLLAHQFIWNMKTNIYLDEEGHQKDPDIGDLLEQLVEEITGSLSGPAKDFYQREFDFFNKITNVSAIIKPSPKGEERKRACLKALSEIKVQPGCYLPSNPEAIVLDIDYKSGTPMQSAAKAPYLAKFKVKRCGVSELEKEGLRCRSDSIDEADETGEGSRRICWQAAIFKVGDDCRQDMLALQIIGLFKNIFQLVGLDLFVFPYRVVATAPGCGVIECIPDCKSRDQLGRQTDFGMYDYFRNQYGDESTLAFQKARYNFIRSMAAYSLLLFLLQIKDRHNGNIMLDSKGHLIHIDFGFMFESSPGGNLGWEPDIKLTDEMVMIMG…
SIO_010081: pi4ka
subclass of: SO_0000673
so part of: pi4ka
location: complement(join(1927087..1927138,1927525..1927608,1927807..1927896,1928314..1928473,1928960..1929080,1929456..1929581,1930715..1930819,1931475..1931584,1931895..1931965,1932153..1932225,1932756..1932826,1935215..1935344,1935650..1935770,1936079..1936132,1936911..1937078,1937967..1938057,1938607..1938806,1938947..1939026,1939243..1939401,1941449..1941576,1941744..1941851,1942302..1942453,1942764..1942922,1944210..1944337,1944878..1945034,1945288..1945380,1948589..1948708,1949065..1949154,1949787..1949870,1950212..1950293,1950508..1950632,1951252..1951322,1951436..1951518,1952032..1952165,1952518..1952654,1953285..1953393,1960543..1960593,1961000..1961168,1961940..1962043,1962423..1962606,1962801..1962896,1963115..1963244,1963671..1963800,1964115..1964215,1964750..1964941,1965323..1965419,1965575..1965640,1966147..1966295,1967013..1967079,1967535..1967794,1968267..1968339,1968579..1968667,1969220..1969313,1969790..1969906,1971025..1971123))
location: region:1927087-1971123:-1
so has part: feature:1971025-1971123:-1:exon
so has part: feature:1969790-1969906:-1:exon
so has part: feature:1969220-1969313:-1:exon
so has part: feature:1968579-1968667:-1:exon
so has part: feature:1968267-1968339:-1:exon
so has part: feature:1967535-1967794:-1:exon
so has part: feature:1967013-1967079:-1:exon
so has part: feature:1966147-1966295:-1:exon
so has part: feature:1965575-1965640:-1:exon
so has part: feature:1965323-1965419:-1:exon
so has part: feature:1964750-1964941:-1:exon
so has part: feature:1964115-1964215:-1:exon
so has part: feature:1963671-1963800:-1:exon
so has part: feature:1963115-1963244:-1:exon
so has part: feature:1962801-1962896:-1:exon
so has part: feature:1962423-1962606:-1:exon
so has part: feature:1961940-1962043:-1:exon
so has part: feature:1961000-1961168:-1:exon
so has part: feature:1960543-1960593:-1:exon
so has part: feature:1953285-1953393:-1:exon
so has part: feature:1952518-1952654:-1:exon
so has part: feature:1952032-1952165:-1:exon
so has part: feature:1951436-1951518:-1:exon
so has part: feature:1951252-1951322:-1:exon
so has part: feature:1950508-1950632:-1:exon
so has part: feature:1950212-1950293:-1:exon
so has part: feature:1949787-1949870:-1:exon
so has part: feature:1949065-1949154:-1:exon
so has part: feature:1948589-1948708:-1:exon
so has part: feature:1945288-1945380:-1:exon
so has part: feature:1944878-1945034:-1:exon
so has part: feature:1944210-1944337:-1:exon
so has part: feature:1942764-1942922:-1:exon
so has part: feature:1942302-1942453:-1:exon
so has part: feature:1941744-1941851:-1:exon
so has part: feature:1941449-1941576:-1:exon
so has part: feature:1939243-1939401:-1:exon
so has part: feature:1938947-1939026:-1:exon
so has part: feature:1938607-1938806:-1:exon
so has part: feature:1937967-1938057:-1:exon
so has part: feature:1936911-1937078:-1:exon
so has part: feature:1936079-1936132:-1:exon
so has part: feature:1935650-1935770:-1:exon
so has part: feature:1935215-1935344:-1:exon
so has part: feature:1932756-1932826:-1:exon
so has part: feature:1932153-1932225:-1:exon
so has part: feature:1931895-1931965:-1:exon
so has part: feature:1931475-1931584:-1:exon
so has part: feature:1930715-1930819:-1:exon
so has part: feature:1929456-1929581:-1:exon
so has part: feature:1928960-1929080:-1:exon
so has part: feature:1928314-1928473:-1:exon
so has part: feature:1927807-1927896:-1:exon
so has part: feature:1927525-1927608:-1:exon
so has part: feature:1927087-1927138:-1:exon

XP_006640178.1
type: Protein
SIO_000068: ncbiprotein

position:1927087:-1
position: 1927087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1971123:-1
position: 1971123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1971025-1971123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1969790-1969906:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1969220-1969313:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1968579-1968667:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1968267-1968339:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1967535-1967794:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1967013-1967079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1966147-1966295:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1965575-1965640:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1965323-1965419:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1964750-1964941:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1964115-1964215:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1963671-1963800:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1963115-1963244:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1962801-1962896:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1962423-1962606:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1961940-1962043:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1961000-1961168:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1960543-1960593:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1953285-1953393:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1952518-1952654:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1952032-1952165:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1951436-1951518:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1951252-1951322:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1950508-1950632:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1950212-1950293:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1949787-1949870:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1949065-1949154:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1948589-1948708:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1945288-1945380:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1944878-1945034:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1944210-1944337:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1942764-1942922:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1942302-1942453:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1941744-1941851:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1941449-1941576:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1939243-1939401:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1938947-1939026:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1938607-1938806:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1937967-1938057:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1936911-1937078:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1936079-1936132:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1935650-1935770:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1935215-1935344:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1932756-1932826:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1932153-1932225:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1931895-1931965:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1931475-1931584:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1930715-1930819:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1929456-1929581:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1928960-1929080:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1928314-1928473:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1927807-1927896:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1927525-1927608:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1927087-1927138:-1:exon

pi4ka
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: pi4ka
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-kinase alpha isoform X1
translation: MSVKGGGSRGFYFNTVLSLARSLAAHRPAPADKVQKLQCMCPVDLRGIYQLDERRRGAVIALGIFLVESGLQHKESIVTYLLGLLKGLPRVQWIEESTGRKGKESLPIAENFSFCLVTLLSDVAQRDASSRGQILEAVMDAMQVLLEMCQTPESQDKEYLCRYAVPCLLGVARAFGRYSNTDESLLSKLCPRVAPQSLRVADELEGVRRRSFNDFRSILPSSLLTVCQGDSLKRKTSSVSSVSQASPERGGTLPSSPAGLTAQYFEGSYLPDGSAVDPDYYFSTISSSFSVSPLFTGHSSKEFDIPLEVLRQLLHMVKQIVADSVLKTLDSVMTEVLELNPNIDLCYKTFSDPLYVAMFKMLRDTLYYMRDLQTSFVKEVHDFVLEQFSISQSELQKILHDVEHVHSELNPLKLRCQASAACVDLMVWAVKEEQGAENLCTKLSEKLQSKTSSKVIIAHMPLLICCLQGLGRLCERFPVVAHPVTTSLRDFLVVPSPVLVKLYKYHSQYHTGTGEIKISVTNEHSQSTLNVLSNKKSQPSMYEQLRDISIDNICRCLKAGLTMDPVIVEAFLASLSNRLYISQENDKDAHLIPDHTIRALGHIAVALRDTPKVMEPILQILQQKFCQPPSQLDVLIIDQLGCMVITGNQYIYQEVWNLFQQISVKASSVVYSATKDHRDHGYRHCSLAVINALANIAANLQGEQMVDELLVNLLELFVQLGLEGKRASERASEKGPALKASSSAGNLGVLIPVIAVLTRRLPPIKEAKPRLQKLFRDFWLYSVVMGFAVEGSGLWPEEWYEGVCEIASKSPLLTFPSGEPLRSELQYNSALKNDTVTPAELNDLRSTIINLLDPPPEVAALINKLDFAMSTYLLSVYRLEYMRVLRSMDPDRFQVMFRYFEDKAIQKDKSGMMQCVIAVGDKVFEVFLQMMAEKPKTKEHEEELERHAQFLLVNFNHTHKRIRRVADKYLSGLAETFPHLLWSGRVLKTMLDILQTLSLSLSADIHKDPPYYDIPDTPYRITVPDTYEARESIVKDFAARCGEILKEAMKWAPSVTKSHLQEYLNKHQNWVSGLSQHTGLAMATESILHFAGYNRQSTTLGPAFLQTTQLTERPACVKKDYSNFMASLNLRNRYAGEVSGMIQFSEATHSTSDLNKLVIKQMSDALVAAQPEAYTQAMFKLTALLISSKDCDPQLLHHLCWAPLKMFTEHGMEAAIACWEWFLAARNSVEVPFMREMAGAWHMTVELKMGLFSEMQKEADPLAASEESQPIPRPPEVTPHYIWIEFLVQRFEIAKYCSADQVEIFASLLQRSLSLNVGGSKCCLNRHVAAIGPRFRLLTLGLALLHADVVTNATIRNVLREKIYSTVFDYFSIAPKFPTQGEKRLREDISIMIKFYASMLSDKKYLAASQLVPPDNQDPSVNSLSVMTVTDSRNNLDVAVGSRQQTTQGWINTYPLSSGMSTISKKSGLSKKSNRGTQLHKYYMKRRTLLLALLASEIERLTTWYNPLSTQELAISTEQSVETSIANWRSKYISLSEKQWKDNVNLAWSISPYLALQLPARFKNAEAIVTEVTRLVRLDPGAVSDVPEAVKYLVTWHTIDADSPELSHILCWAPTDPPTGLSYFSSMYPPHPLTAQYGVKVLRSFPPDAILFYIPQIVQSLRYDKMGYIREYILWAAAKSQLLAHQFIWNMKTNIYLDEEGHQKDPDIGDLLEQLVEEITGSLSGPAKDFYQREFDFFNKITNVSAIIKPSPKGEERKRACLKALSEIKVQPGCYLPSNPEAIVLDIDYKSGTPMQSAAKAPYLAKFKVKRCGVSELEKEGLRCRSDSIDEADETGEGSRRICWQAAIFKVGDDCRQDMLALQIIGLFKNIFQLVGLDLFVFPYRVVATAPGCGVIECIPDCKSRDQLGRQTDFGMYDYFRNQYGDESTLAFQKARYNFIRSMAAYSLLLFLLQIKDRHNGNIMLDSKGHLIHIDFGFMFESSPGGNLGWEPDIKLTDEM…
SIO_010081: pi4ka
subclass of: SO_0000673
so part of: pi4ka
location: complement(join(1927087..1927138,1927525..1927608,1927807..1927896,1928314..1928473,1928960..1929080,1929456..1929581,1930715..1930819,1931475..1931584,1931895..1931965,1932153..1932225,1932756..1932826,1935215..1935344,1935650..1935770,1936079..1936132,1936911..1937078,1937967..1938057,1938607..1938806,1938947..1939026,1939243..1939401,1941449..1941576,1941744..1941851,1942302..1942453,1942764..1942922,1944210..1944337,1944878..1945034,1945288..1945380,1946898..1946912,1948589..1948708,1949065..1949154,1949787..1949870,1950212..1950293,1950508..1950632,1951252..1951322,1951436..1951518,1952032..1952165,1952518..1952654,1953285..1953393,1960543..1960593,1961000..1961168,1961940..1962043,1962423..1962606,1962801..1962896,1963115..1963244,1963671..1963800,1964115..1964215,1964750..1964941,1965323..1965419,1965575..1965640,1966147..1966295,1967013..1967079,1967535..1967794,1968267..1968339,1968579..1968667,1969220..1969313,1969790..1969906,1971025..1971123))
location: region:1927087-1971123:-1
so has part: feature:1971025-1971123:-1:exon
so has part: feature:1969790-1969906:-1:exon
so has part: feature:1969220-1969313:-1:exon
so has part: feature:1968579-1968667:-1:exon
so has part: feature:1968267-1968339:-1:exon
so has part: feature:1967535-1967794:-1:exon
so has part: feature:1967013-1967079:-1:exon
so has part: feature:1966147-1966295:-1:exon
so has part: feature:1965575-1965640:-1:exon
so has part: feature:1965323-1965419:-1:exon
so has part: feature:1964750-1964941:-1:exon
so has part: feature:1964115-1964215:-1:exon
so has part: feature:1963671-1963800:-1:exon
so has part: feature:1963115-1963244:-1:exon
so has part: feature:1962801-1962896:-1:exon
so has part: feature:1962423-1962606:-1:exon
so has part: feature:1961940-1962043:-1:exon
so has part: feature:1961000-1961168:-1:exon
so has part: feature:1960543-1960593:-1:exon
so has part: feature:1953285-1953393:-1:exon
so has part: feature:1952518-1952654:-1:exon
so has part: feature:1952032-1952165:-1:exon
so has part: feature:1951436-1951518:-1:exon
so has part: feature:1951252-1951322:-1:exon
so has part: feature:1950508-1950632:-1:exon
so has part: feature:1950212-1950293:-1:exon
so has part: feature:1949787-1949870:-1:exon
so has part: feature:1949065-1949154:-1:exon
so has part: feature:1948589-1948708:-1:exon
so has part: feature:1946898-1946912:-1:exon
so has part: feature:1945288-1945380:-1:exon
so has part: feature:1944878-1945034:-1:exon
so has part: feature:1944210-1944337:-1:exon
so has part: feature:1942764-1942922:-1:exon
so has part: feature:1942302-1942453:-1:exon
so has part: feature:1941744-1941851:-1:exon
so has part: feature:1941449-1941576:-1:exon
so has part: feature:1939243-1939401:-1:exon
so has part: feature:1938947-1939026:-1:exon
so has part: feature:1938607-1938806:-1:exon
so has part: feature:1937967-1938057:-1:exon
so has part: feature:1936911-1937078:-1:exon
so has part: feature:1936079-1936132:-1:exon
so has part: feature:1935650-1935770:-1:exon
so has part: feature:1935215-1935344:-1:exon
so has part: feature:1932756-1932826:-1:exon
so has part: feature:1932153-1932225:-1:exon
so has part: feature:1931895-1931965:-1:exon
so has part: feature:1931475-1931584:-1:exon
so has part: feature:1930715-1930819:-1:exon
so has part: feature:1929456-1929581:-1:exon
so has part: feature:1928960-1929080:-1:exon
so has part: feature:1928314-1928473:-1:exon
so has part: feature:1927807-1927896:-1:exon
so has part: feature:1927525-1927608:-1:exon
so has part: feature:1927087-1927138:-1:exon

XP_006640180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1971025-1971123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1969790-1969906:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1969220-1969313:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1968579-1968667:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1968267-1968339:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1967535-1967794:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1967013-1967079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1966147-1966295:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1965575-1965640:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1965323-1965419:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1964750-1964941:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1964115-1964215:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1963671-1963800:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1963115-1963244:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1962801-1962896:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1962423-1962606:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1961940-1962043:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1961000-1961168:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1960543-1960593:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1953285-1953393:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1952518-1952654:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1952032-1952165:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1951436-1951518:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1951252-1951322:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1950508-1950632:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1950212-1950293:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1949787-1949870:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1949065-1949154:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1948589-1948708:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1946898-1946912:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1945288-1945380:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1944878-1945034:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1944210-1944337:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1942764-1942922:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1942302-1942453:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1941744-1941851:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1941449-1941576:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1939243-1939401:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1938947-1939026:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1938607-1938806:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1937967-1938057:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1936911-1937078:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1936079-1936132:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1935650-1935770:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1935215-1935344:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1932756-1932826:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1932153-1932225:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1931895-1931965:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1931475-1931584:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1930715-1930819:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1929456-1929581:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1928960-1929080:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1928314-1928473:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1927807-1927896:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1927525-1927608:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1927087-1927138:-1:exon

hic2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7918
gene: hic2
product: hypermethylated in cancer 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_001480642.1
SIO_010081: hic2
so part of: hic2
location: join(1927845..1927935,1928221..1928312)
location: region:1927845-1928312:1
so has part: feature:1927845-1927935:1:exon
so has part: feature:1928221-1928312:1:exon

position:1927845:1
position: 1927845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1927845-1927935:1:exon

position:1927935:1
position: 1927935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1928221-1928312:1:exon

serpind1
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: serpind1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1955053..1959635
location: region:1955053-1959635:1
so has part: feature:1955053-1959635:1:exon
subclass of: SO_0000010

102687307
type: Gene
SIO_000068: ncbigene

position:1955053:1
position: 1955053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1959635:1
position: 1959635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1955053-1959635:1:exon

serpind1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: serpind1
product: serpin peptidase inhibitor, clade D (heparin cofactor), member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_006640126.2
SIO_010081: serpind1
subclass of: SO_0000673
so part of: serpind1
location: join(1955053..1956021,1956324..1956597,1957385..1957529,1958329..1959635)
location: region:1955053-1959635:1
so has part: feature:1955053-1956021:1:exon
so has part: feature:1956324-1956597:1:exon
so has part: feature:1957385-1957529:1:exon
so has part: feature:1958329-1959635:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1955053-1956021:1:exon

position:1956021:1
position: 1956021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1956324-1956597:1:exon

position:1956324:1
position: 1956324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1956597:1
position: 1956597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1957385-1957529:1:exon

position:1957385:1
position: 1957385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1957529:1
position: 1957529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1958329-1959635:1:exon

position:1958329:1
position: 1958329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

serpind1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7918
gene: serpind1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heparin cofactor 2
translation: MWFLTIAAVACLFPPASHAGVKDLSLHFSQTDHSPPPSAGPRGSQPGGAGDVEKIPTDFHKENTVTNDLPFDGGFEEEDYIDFDKLLGLDDTDYDAIDEIDTPAPGGDVVTEPTDPQVRRANLYRLFHGQTRIQRLSTANADFGFSLYRSLRNAANQTDNILFAPAGVSIAMGMIDLGTKQHTHEQLFSVLGFQDLVNASSKYEDSTVHKLFRKLTHRLFRRNFGYTLRSVNDLYVERGRSITDAFRATVKEYYFAEPQSVDFRDPAFLLKANQRISKLTKGLIKEGLKNVNPDTVLMLLNYLYFKGTWENKFPAKQTSYRSFRLSERETVRVPMMQTKGNFLAAADHELDCDILQMSYVGNISMLVAIPRKLSGMRNLETQISPAVVNRWINSMTNRTREVVFPKFKLERNYNLIGHLKEMGLTDLFNVTADFSGMTDEKIAIDMFKHQATITVNEEGTEAAAVTTVGFMPLSAQIRFIVDRPFLFLIYEHRTSCLLFMGRVVNPNNN
SIO_010081: serpind1
subclass of: SO_0000673
so part of: serpind1
location: join(1955103..1956021,1956324..1956597,1957385..1957529,1958329..1958520)
location: region:1955103-1958520:1
so has part: feature:1955103-1956021:1:exon
so has part: feature:1956324-1956597:1:exon
so has part: feature:1957385-1957529:1:exon
so has part: feature:1958329-1958520:1:exon

XP_006640189.1
type: Protein
SIO_000068: ncbiprotein

position:1955103:1
position: 1955103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1958520:1
position: 1958520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1955103-1956021:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1956324-1956597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1957385-1957529:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1958329-1958520:1:exon

snap29
type: Gene
subclass of: SO_0000704
RO_0002162: 7918
gene: snap29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1976563..1979229
location: region:1976563-1979229:1
so has part: feature:1976563-1979229:1:exon
subclass of: SO_0000010

102691965
type: Gene
SIO_000068: ncbigene

position:1976563:1
position: 1976563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1979229:1
position: 1979229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1976563-1979229:1:exon

snap29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7918
gene: snap29
product: synaptosome associated protein 29kDa
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015365822.1
SIO_010081: snap29
subclass of: SO_0000673
so part of: snap29
location: join(1976563..1976849,1976992..1977077,1977372..1977482,1977816..1979229)
location: region:1976563-1979229:1
so has part: feature:1976563-1976849:1:exon
so has part: feature:1976992-1977077:1:exon
so has part: feature:1977372-1977482:1:exon
so has part: feature:1977816-1979229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1976563-1976849:1:exon

position:1976849:1
position: 1976849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1976992-1977077:1:exon