Polyodon spathula isolate WHYD16114869_AA chromosome 36, ASM1765450v1, whole genome shotgun sequence.
type: Entry
definition: Polyodon spathula isolate WHYD16114869_AA chromosome 36, ASM1765450v1, whole genome shotgun sequence.
sequence version: NC_054569.1
sequence date: 2021-05-03
sequence: sequence
division: CON
label: NC_054569.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA726223
dblink: SAMN09842169
keyword: WGS
keyword: RefSeq
source: Polyodon spathula (Mississippi paddlefish)
organism: Polyodon spathula
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Polyodontidae; Polyodon.
reference: 1
references: 33331879
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM030285.1.\nAssembly name: ASM1765450v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Yangtze River Fisheries\nResearch Institute, Chinese Academy of Fishery Sciences on\n2021/03/31. The original whole-genome shotgun project has the\naccession JADDYA000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Yangtze River Fisheries Research\n Institute, Chinese Academy of Fishery\n Sciences\nAssembly Date :: AUG-2019\nAssembly Method :: SSPACE v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 300.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Polyodon spathula Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 5854724
topology: linear
so has quality: SO_0000987
location: 1..5854724
location: region:1-5854724:1
RO_0002162: 7913

NC_054569
type: RefSeq
SIO_000068: refseq

PRJNA726223
type: BioProject
SIO_000068: bioproject

SAMN09842169
type: BioSample
SIO_000068: biosample

1
title: The American paddlefish genome provides novel insights into chromosomal evolution and bone mineralization in early vertebrates
author: Cheng, P.
author: Huang, Y.
author: Lv, Y.
author: Du, H.
author: Ruan, Z.
author: Li, C.
author: Ye, H.
author: Zhang, H.
author: Wu, J.
author: Wang, C.
author: Ruan, R.
author: Li, Y.
author: Bian, C.
author: You, X.
author: Shi, C.
author: Han, K.
author: Xu, J.
author: Shi, Q.
author: Wei, Q.
journal: Mol Biol Evol (2020) In press
pubmed: 33331879
comments: Publication Status: Available-Online prior to print

33331879
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5854724:1
position: 5854724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-5854724:1:source
so part of: sequence
organism: Polyodon spathula
mol type: genomic DNA
isolate: WHYD16114869_AA
chromosome: 36
tissue type: blood

7913
type: Taxonomy
SIO_000068: taxonomy

LOC121303938
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(24402..28121)
location: region:24402-28121:-1
so has part: feature:24402-28121:-1:exon
subclass of: SO_0000010

121303938
type: Gene
SIO_000068: ncbigene

position:24402:-1
position: 24402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28121:-1
position: 28121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24402-28121:-1:exon

LOC121303938
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303938
product: uncharacterized LOC121303938
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_041234840.1
SIO_010081: LOC121303938
subclass of: SO_0000673
so part of: LOC121303938
location: complement(join(24402..26404,26506..26574,27807..27914,28012..28121))
location: region:24402-28121:-1
so has part: feature:28012-28121:-1:exon
so has part: feature:27807-27914:-1:exon
so has part: feature:26506-26574:-1:exon
so has part: feature:24402-26404:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28012-28121:-1:exon

position:28012:-1
position: 28012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27807-27914:-1:exon

position:27807:-1
position: 27807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27914:-1
position: 27914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:26506-26574:-1:exon

position:26506:-1
position: 26506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26574:-1
position: 26574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:24402-26404:-1:exon

position:26404:-1
position: 26404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121303938
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121303938
translation: MERKKKGWLLICFLLLLENFQACILSKNTPAVITDKELDMDQKNSSSLNIHQRQKRWVGALIQISLEVTDTALTVANALKDGCVYRPMICTYKDEIKKYEEKEKSLSIILTNKRDLLLSEVEKLTTSFVQNDNIYDYVKDTVELASEVSVLMMLWKTEITSKQYILRINGTLNMSDANIPENIEKKFSDQRSEYLRKLGITIGIKALVYFLIHFFSYVAKKSIKQIYYVFADVLQPGLLREKSFRTYYHENTKAYMSKWHAQHDFSTAVSKSTVFKAKVKGFVKTATTYIKDSSNNFYKSKGFWVTTGLSLLGAGLSQGLQAREFIRVENEMKELVKNHEILYSSLEVSLENLTITERSLQKEWRLSIDIFKNFTFYISDTKSTFEELPLKQQLNIKEKLPDLYKLLEIDIESTTSDNILQKQRDTLDYMTAMKDSLKTIRAHVLLEVIVLQVIKNGLNQSQEVNVIVDIINGHLDKDETMHKKIDLKIVLCQIAEWGDEGEYDFYDLSDFRNCPIDINMEEVKRKQKEKKEIIQKLNAIVTTCIVLNFQFCPSVSEIATTLKLTEEETKRNIKSIKPDMQSFNGTPL
SIO_010081: LOC121303938
subclass of: SO_0000673
so part of: LOC121303938
location: complement(join(24879..26404,26506..26574,27807..27914,28012..28075))
location: region:24879-28075:-1
so has part: feature:28012-28075:-1:exon
so has part: feature:27807-27914:-1:exon
so has part: feature:26506-26574:-1:exon
so has part: feature:24879-26404:-1:exon

XP_041090774.1
type: Protein
SIO_000068: ncbiprotein

position:24879:-1
position: 24879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28075:-1
position: 28075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28012-28075:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27807-27914:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26506-26574:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24879-26404:-1:exon

LOC121303939
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 44576..54574
location: region:44576-54574:1
so has part: feature:44576-54574:1:exon
subclass of: SO_0000010

121303939
type: Gene
SIO_000068: ncbigene

position:44576:1
position: 44576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54574:1
position: 54574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44576-54574:1:exon

LOC121303939
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303939
product: uncharacterized LOC121303939
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041234841.1
SIO_010081: LOC121303939
subclass of: SO_0000673
so part of: LOC121303939
location: join(44576..44736,44812..44907,49312..49380,52875..54574)
location: region:44576-54574:1
so has part: feature:44576-44736:1:exon
so has part: feature:44812-44907:1:exon
so has part: feature:49312-49380:1:exon
so has part: feature:52875-54574:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44576-44736:1:exon

position:44736:1
position: 44736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:44812-44907:1:exon

position:44812:1
position: 44812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44907:1
position: 44907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:49312-49380:1:exon

position:49312:1
position: 49312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49380:1
position: 49380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:52875-54574:1:exon

position:52875:1
position: 52875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121303939
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121303939
translation: MEKNNCSWLIFYLLFQCQIFHACLLKNNTPDVSFIEVENNSSSTKVHQRQKRWVGLLIRISLETTDTALTVVNSLKGGCVYRPNICLYRDNIAKFEIQEQNLSRILNEKYESLLTNVEKFATSVFQNIEISRHIEDIVITGAHINFGMSILNSTIKLEEFKTNESVVMDFPDVSQNFIEKFYMERERSFKNLNIVQKASSLLHLVNRLTFKSVNRIISKISFALSSKSMLKEESFKSFYHKYTQEYLSQWKGKSGVFSGPVKLSETLRAKVRGFVKTASIYIRDSAKNFYKSKTFWGTTAVSLAGAVISQGLQAQRYIQIENEMKILMENHKTLILSLKTVEQNLTDSIQDIDEQWQISLDFFRNLTSYINDTKSSFEDIPAEHQSKLKHMPSLQTMIENNFENISSSNILMKQRIFLNYLTEMKESIKKLKAVILLELHLSLGTERELHHNREVNDIVAIINGKLDNEETMHQKVDKKRVICEIAKRHERNYYDYYNLNDFRPNCPNYLDMDVIEADRLKLKRIMTTLNSILMVCEMSHFNKCPSLSNISQILNLSEEETKRLIKSFMPHMLNVIKL
SIO_010081: LOC121303939
subclass of: SO_0000673
so part of: LOC121303939
location: join(44673..44736,44812..44907,49312..49380,52875..54382)
location: region:44673-54382:1
so has part: feature:44673-44736:1:exon
so has part: feature:44812-44907:1:exon
so has part: feature:49312-49380:1:exon
so has part: feature:52875-54382:1:exon

XP_041090775.1
type: Protein
SIO_000068: ncbiprotein

position:44673:1
position: 44673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54382:1
position: 54382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44673-44736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44812-44907:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49312-49380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52875-54382:1:exon

LOC121304097
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304097
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(70635..70761)
location: region:70635-70761:-1
so has part: feature:70635-70761:-1:exon

121304097
type: Gene
SIO_000068: ncbigene

position:70635:-1
position: 70635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70761:-1
position: 70761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70635-70761:-1:exon

LOC121304097
type: Exon
subclass of: SO_0000147
RO_0002162: 7913
gene: LOC121304097
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00002
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC121304097
subclass of: SO_0000673
so part of: LOC121304097
location: complement(70635..70761)
location: region:70635-70761:-1
so has part: feature:70635-70761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70635-70761:-1:exon

LOC121304040
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(74767..89159)
location: region:74767-89159:-1
so has part: feature:74767-89159:-1:exon
subclass of: SO_0000010

121304040
type: Gene
SIO_000068: ncbigene

position:74767:-1
position: 74767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89159:-1
position: 89159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74767-89159:-1:exon

LOC121304040
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304040
product: zinc finger protein 501-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_041234991.1
SIO_010081: LOC121304040
subclass of: SO_0000673
so part of: LOC121304040
location: complement(join(74767..76117,85644..86091,89032..89159))
location: region:74767-89159:-1
so has part: feature:89032-89159:-1:exon
so has part: feature:85644-86091:-1:exon
so has part: feature:74767-76117:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89032-89159:-1:exon

position:89032:-1
position: 89032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:85644-86091:-1:exon

position:85644:-1
position: 85644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86091:-1
position: 86091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:74767-76117:-1:exon

position:76117:-1
position: 76117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121304040
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304040
product: zinc finger protein 501-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_041234992.1
SIO_010081: LOC121304040
subclass of: SO_0000673
so part of: LOC121304040
location: complement(join(74767..76117,85644..86775))
location: region:74767-86775:-1
so has part: feature:85644-86775:-1:exon
so has part: feature:74767-76117:-1:exon

position:86775:-1
position: 86775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85644-86775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:74767-76117:-1:exon

LOC121304040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 501-like
translation: MDSVNMESVLIKEELPESELVLNRMELSGLASLPINQELCEIPCDSFNPEVLAGIKAECNELVISQAEELVPLNQELSEMPCDSIDPEVLAGIKDECSELEISQAEELVPIKAEAPEIEDFKLEPWEVEFERLEPGREECSSSAAKVRVGGHSTDLKSFSELGHLTTHKRIHTREKPHRCSDCGKSFSKSEDLESHQQIHTEDKTYHCSDCGKNFSRLGSFVNHKRIHSGEKRYCCSDCGKSFSKSSQLSCHKRIHTGEKSYSCSDCGKSFRHSGNLVTHKRIHTGEKPYCCSDCGKCFRESNQLVTHQRIHTGEKPYCCSDCGKSFSHSGSLVAHQRIHTGEKPYYCSDCGKSFSHSGTLISHQRIHTGEKPYHCSDCGKSFREPGSLIVHKRIHTGEKPYSCSNCGKSFNRSESLVLHQRVHTGEKPYNCSDCGKSFRLSEQLVKHQRIHTGEKPYHCSECGRSFSQSGTLISHQRIHTRNKTKKP
SIO_010081: LOC121304040
subclass of: SO_0000673
so part of: LOC121304040
location: complement(join(75069..76117,85644..86061))
location: region:75069-86061:-1
so has part: feature:85644-86061:-1:exon
so has part: feature:75069-76117:-1:exon

XP_041090925.1
type: Protein
SIO_000068: ncbiprotein

position:75069:-1
position: 75069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86061:-1
position: 86061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85644-86061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75069-76117:-1:exon

LOC121304040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 501-like
translation: MDSVNMESVLIKEELPESELVLNRMELSGLASLPINQELCEIPCDSFNPEVLAGIKAECNELVISQAEELVPLNQELSEMPCDSIDPEVLAGIKDECSELEISQAEELVPIKAEAPEIEDFKLEPWEVEFERLEPGREECSSSAAKVRVGGHSTDLKSFSELGHLTTHKRIHTREKPHRCSDCGKSFSKSEDLESHQQIHTEDKTYHCSDCGKNFSRLGSFVNHKRIHSGEKRYCCSDCGKSFSKSSQLSCHKRIHTGEKSYSCSDCGKSFRHSGNLVTHKRIHTGEKPYCCSDCGKCFRESNQLVTHQRIHTGEKPYCCSDCGKSFSHSGSLVAHQRIHTGEKPYYCSDCGKSFSHSGTLISHQRIHTGEKPYHCSDCGKSFREPGSLIVHKRIHTGEKPYSCSNCGKSFNRSESLVLHQRVHTGEKPYNCSDCGKSFRLSEQLVKHQRIHTGEKPYHCSECGRSFSQSGTLISHQRIHTRNKTKKP
SIO_010081: LOC121304040
subclass of: SO_0000673
so part of: LOC121304040
location: complement(join(75069..76117,85644..86061))
location: region:75069-86061:-1
so has part: feature:85644-86061:-1:exon
so has part: feature:75069-76117:-1:exon

XP_041090926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85644-86061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75069-76117:-1:exon

LOC121303942
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303942
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(117112..126393)
location: region:117112-126393:-1
so has part: feature:117112-126393:-1:exon
subclass of: SO_0000010

121303942
type: Gene
SIO_000068: ncbigene

position:117112:-1
position: 117112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126393:-1
position: 126393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117112-126393:-1:exon

LOC121303942
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303942
product: major histocompatibility complex class I-related gene protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041234844.1
SIO_010081: LOC121303942
subclass of: SO_0000673
so part of: LOC121303942
location: complement(join(117112..117125,117462..117734,119797..120057,126230..126393))
location: region:117112-126393:-1
so has part: feature:126230-126393:-1:exon
so has part: feature:119797-120057:-1:exon
so has part: feature:117462-117734:-1:exon
so has part: feature:117112-117125:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126230-126393:-1:exon

position:126230:-1
position: 126230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119797-120057:-1:exon

position:119797:-1
position: 119797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120057:-1
position: 120057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:117462-117734:-1:exon

position:117462:-1
position: 117462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117734:-1
position: 117734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:117112-117125:-1:exon

position:117125:-1
position: 117125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121303942
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303942
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: major histocompatibility complex class I-related gene protein-like
translation: MTRVAVPWILCWVHAAAAGTHSLQYFAVATSEGTKTPAYVTVNMVDDVQYSYYDSTMEKPVLLLDWMNKTMGREFWDIRIRYILHGHDIMKWSLRNTIQHFNHTGVHTYQHAGGCELDDDGTRRAYLYHAYDGKDFVSLDVDTMTWTAAVPQAVFYKHKREADTALQQITLDYHRQDCFLLLEWCLQYGKDTLQRKAACA
SIO_010081: LOC121303942
subclass of: SO_0000673
so part of: LOC121303942
location: complement(join(117112..117125,117462..117734,119797..120057,126230..126284))
location: region:117112-126284:-1
so has part: feature:126230-126284:-1:exon
so has part: feature:119797-120057:-1:exon
so has part: feature:117462-117734:-1:exon
so has part: feature:117112-117125:-1:exon

XP_041090778.1
type: Protein
SIO_000068: ncbiprotein

position:126284:-1
position: 126284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126230-126284:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119797-120057:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:117462-117734:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117112-117125:-1:exon

LOC121304038
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 135297..139805
location: region:135297-139805:1
so has part: feature:135297-139805:1:exon
subclass of: SO_0000010

121304038
type: Gene
SIO_000068: ncbigene

position:135297:1
position: 135297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139805:1
position: 139805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135297-139805:1:exon

LOC121304038
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304038
product: cis-aconitate decarboxylase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_041234990.1
SIO_010081: LOC121304038
subclass of: SO_0000673
so part of: LOC121304038
location: join(135297..135848,136000..136060,136261..136448,136701..136793,137485..137690,138025..139805)
location: region:135297-139805:1
so has part: feature:135297-135848:1:exon
so has part: feature:136000-136060:1:exon
so has part: feature:136261-136448:1:exon
so has part: feature:136701-136793:1:exon
so has part: feature:137485-137690:1:exon
so has part: feature:138025-139805:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:135297-135848:1:exon

position:135848:1
position: 135848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:136000-136060:1:exon

position:136000:1
position: 136000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136060:1
position: 136060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:136261-136448:1:exon

position:136261:1
position: 136261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136448:1
position: 136448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:136701-136793:1:exon

position:136701:1
position: 136701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136793:1
position: 136793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:137485-137690:1:exon

position:137485:1
position: 137485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137690:1
position: 137690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:138025-139805:1:exon

position:138025:1
position: 138025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121304038
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cis-aconitate decarboxylase-like
translation: MLSALKFQRTPRHFSCLRLLHKSAVEVQERPAPEETVTSSFGGFIHSVHPGQLSDTVLHRSKRMILDSIGVGLLGSTSHVFQLALQHCQQMYAPDYISSVFGRWHTRLSPSLAAFVNGVAVHSMDFDDTWHPATHPSGAVLPALLAIAQMLPGNAKPSGMDLLLAFNVGIEIQGRLMRFSNEAQNIPNRFHPPTVVGPLGSAAACSRLLSLDRLQCSNALAIAASLAGAPMANAATQSKPLHIGNAARLGMEAALLASRGLEASTLILDSTPGCAGFSAFYNDYLPKALPSPEEQDPRFLLEDQDIAFKRFPAHLGMHWVADAACSARELLVNTVGGFHPSMIQSILLRIPLSKYINRPFPESEHQARHSFQFNACTALLDGEVSVQSFSPAFLDRPELISLLSRVRVEHPQDNPANFNKMYAEVLLTLTTGNVLKGRCDTFYGHWRKPLSRDSLLKKFRANAGAVLPGERVEAIIDAVENIEDMQDCSHLTMHLE
SIO_010081: LOC121304038
subclass of: SO_0000673
so part of: LOC121304038
location: join(135831..135848,136000..136060,136261..136448,136701..136793,137485..137690,138025..138949)
location: region:135831-138949:1
so has part: feature:135831-135848:1:exon
so has part: feature:136000-136060:1:exon
so has part: feature:136261-136448:1:exon
so has part: feature:136701-136793:1:exon
so has part: feature:137485-137690:1:exon
so has part: feature:138025-138949:1:exon

XP_041090924.1
type: Protein
SIO_000068: ncbiprotein

position:135831:1
position: 135831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138949:1
position: 138949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135831-135848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136000-136060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136261-136448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136701-136793:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:137485-137690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:138025-138949:1:exon

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 146962..147048
location: region:146962-147048:1
so has part: feature:146962-147048:1:exon
subclass of: SO_0000663

121304101
type: Gene
SIO_000068: ncbigene

position:146962:1
position: 146962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147048:1
position: 147048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146962-147048:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7913
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:146995..146997,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(146962..146998,147013..147048)
location: region:146962-147048:1
so has part: feature:146962-146998:1:exon
so has part: feature:147013-147048:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146962-146998:1:exon

position:146998:1
position: 146998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147013-147048:1:exon

position:147013:1
position: 147013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 147438..147524
location: region:147438-147524:1
so has part: feature:147438-147524:1:exon
subclass of: SO_0000663

121304112
type: Gene
SIO_000068: ncbigene

position:147438:1
position: 147438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147524:1
position: 147524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147438-147524:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7913
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:147471..147473,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(147438..147474,147489..147524)
location: region:147438-147524:1
so has part: feature:147438-147474:1:exon
so has part: feature:147489-147524:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147438-147474:1:exon

position:147474:1
position: 147474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147489-147524:1:exon

position:147489:1
position: 147489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 148623..148709
location: region:148623-148709:1
so has part: feature:148623-148709:1:exon
subclass of: SO_0000663

121304114
type: Gene
SIO_000068: ncbigene

position:148623:1
position: 148623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148709:1
position: 148709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148623-148709:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7913
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:148656..148658,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(148623..148659,148674..148709)
location: region:148623-148709:1
so has part: feature:148623-148659:1:exon
so has part: feature:148674-148709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148623-148659:1:exon

position:148659:1
position: 148659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:148674-148709:1:exon

position:148674:1
position: 148674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 149613..149699
location: region:149613-149699:1
so has part: feature:149613-149699:1:exon
subclass of: SO_0000663

121304115
type: Gene
SIO_000068: ncbigene

position:149613:1
position: 149613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149699:1
position: 149699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149613-149699:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7913
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:149646..149648,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(149613..149649,149664..149699)
location: region:149613-149699:1
so has part: feature:149613-149649:1:exon
so has part: feature:149664-149699:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:149613-149649:1:exon

position:149649:1
position: 149649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:149664-149699:1:exon

position:149664:1
position: 149664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 150566..150652
location: region:150566-150652:1
so has part: feature:150566-150652:1:exon
subclass of: SO_0000663

121304116
type: Gene
SIO_000068: ncbigene

position:150566:1
position: 150566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150652:1
position: 150652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150566-150652:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7913
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:150599..150601,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(150566..150602,150617..150652)
location: region:150566-150652:1
so has part: feature:150566-150602:1:exon
so has part: feature:150617-150652:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:150566-150602:1:exon

position:150602:1
position: 150602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:150617-150652:1:exon

position:150617:1
position: 150617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 151454..151540
location: region:151454-151540:1
so has part: feature:151454-151540:1:exon
subclass of: SO_0000663

121304102
type: Gene
SIO_000068: ncbigene

position:151454:1
position: 151454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151540:1
position: 151540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151454-151540:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7913
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:151487..151489,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(151454..151490,151505..151540)
location: region:151454-151540:1
so has part: feature:151454-151490:1:exon
so has part: feature:151505-151540:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151454-151490:1:exon

position:151490:1
position: 151490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:151505-151540:1:exon

position:151505:1
position: 151505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 152860..152946
location: region:152860-152946:1
so has part: feature:152860-152946:1:exon
subclass of: SO_0000663

121304103
type: Gene
SIO_000068: ncbigene

position:152860:1
position: 152860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152946:1
position: 152946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152860-152946:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7913
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:152893..152895,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(152860..152896,152911..152946)
location: region:152860-152946:1
so has part: feature:152860-152896:1:exon
so has part: feature:152911-152946:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:152860-152896:1:exon

position:152896:1
position: 152896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:152911-152946:1:exon

position:152911:1
position: 152911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 153763..153849
location: region:153763-153849:1
so has part: feature:153763-153849:1:exon
subclass of: SO_0000663

121304104
type: Gene
SIO_000068: ncbigene

position:153763:1
position: 153763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153849:1
position: 153849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153763-153849:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7913
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:153796..153798,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(153763..153799,153814..153849)
location: region:153763-153849:1
so has part: feature:153763-153799:1:exon
so has part: feature:153814-153849:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153763-153799:1:exon

position:153799:1
position: 153799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:153814-153849:1:exon

position:153814:1
position: 153814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 155151..155237
location: region:155151-155237:1
so has part: feature:155151-155237:1:exon
subclass of: SO_0000663

121304105
type: Gene
SIO_000068: ncbigene

position:155151:1
position: 155151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155237:1
position: 155237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155151-155237:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7913
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:155184..155186,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(155151..155187,155202..155237)
location: region:155151-155237:1
so has part: feature:155151-155187:1:exon
so has part: feature:155202-155237:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155151-155187:1:exon

position:155187:1
position: 155187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:155202-155237:1:exon

position:155202:1
position: 155202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 156062..156148
location: region:156062-156148:1
so has part: feature:156062-156148:1:exon
subclass of: SO_0000663

121304106
type: Gene
SIO_000068: ncbigene

position:156062:1
position: 156062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156148:1
position: 156148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156062-156148:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7913
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:156095..156097,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(156062..156098,156113..156148)
location: region:156062-156148:1
so has part: feature:156062-156098:1:exon
so has part: feature:156113-156148:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156062-156098:1:exon

position:156098:1
position: 156098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:156113-156148:1:exon

position:156113:1
position: 156113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 156968..157054
location: region:156968-157054:1
so has part: feature:156968-157054:1:exon
subclass of: SO_0000663

121304107
type: Gene
SIO_000068: ncbigene

position:156968:1
position: 156968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157054:1
position: 157054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156968-157054:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7913
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:157001..157003,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(156968..157004,157019..157054)
location: region:156968-157054:1
so has part: feature:156968-157004:1:exon
so has part: feature:157019-157054:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156968-157004:1:exon

position:157004:1
position: 157004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:157019-157054:1:exon

position:157019:1
position: 157019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 157853..157939
location: region:157853-157939:1
so has part: feature:157853-157939:1:exon
subclass of: SO_0000663

121304108
type: Gene
SIO_000068: ncbigene

position:157853:1
position: 157853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157939:1
position: 157939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157853-157939:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7913
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:157886..157888,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(157853..157889,157904..157939)
location: region:157853-157939:1
so has part: feature:157853-157889:1:exon
so has part: feature:157904-157939:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157853-157889:1:exon

position:157889:1
position: 157889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:157904-157939:1:exon

position:157904:1
position: 157904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 158314..158400
location: region:158314-158400:1
so has part: feature:158314-158400:1:exon
subclass of: SO_0000663

121304109
type: Gene
SIO_000068: ncbigene

position:158314:1
position: 158314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158400:1
position: 158400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158314-158400:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7913
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:158347..158349,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(158314..158350,158365..158400)
location: region:158314-158400:1
so has part: feature:158314-158350:1:exon
so has part: feature:158365-158400:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:158314-158350:1:exon

position:158350:1
position: 158350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158365-158400:1:exon

position:158365:1
position: 158365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 159234..159320
location: region:159234-159320:1
so has part: feature:159234-159320:1:exon
subclass of: SO_0000663

121304110
type: Gene
SIO_000068: ncbigene

position:159234:1
position: 159234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159320:1
position: 159320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159234-159320:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7913
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:159267..159269,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(159234..159270,159285..159320)
location: region:159234-159320:1
so has part: feature:159234-159270:1:exon
so has part: feature:159285-159320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159234-159270:1:exon

position:159270:1
position: 159270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:159285-159320:1:exon

position:159285:1
position: 159285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 160195..160281
location: region:160195-160281:1
so has part: feature:160195-160281:1:exon
subclass of: SO_0000663

121304111
type: Gene
SIO_000068: ncbigene

position:160195:1
position: 160195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160281:1
position: 160281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160195-160281:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7913
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:160228..160230,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(160195..160231,160246..160281)
location: region:160195-160281:1
so has part: feature:160195-160231:1:exon
so has part: feature:160246-160281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160195-160231:1:exon

position:160231:1
position: 160231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:160246-160281:1:exon

position:160246:1
position: 160246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 161676..161762
location: region:161676-161762:1
so has part: feature:161676-161762:1:exon
subclass of: SO_0000663

121304113
type: Gene
SIO_000068: ncbigene

position:161676:1
position: 161676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161762:1
position: 161762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161676-161762:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7913
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:161709..161711,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(161676..161712,161727..161762)
location: region:161676-161762:1
so has part: feature:161676-161712:1:exon
so has part: feature:161727-161762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:161676-161712:1:exon

position:161712:1
position: 161712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161727-161762:1:exon

position:161727:1
position: 161727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121304037
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 174129..195683
location: region:174129-195683:1
so has part: feature:174129-195683:1:exon
subclass of: SO_0000010

121304037
type: Gene
SIO_000068: ncbigene

position:174129:1
position: 174129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195683:1
position: 195683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174129-195683:1:exon

LOC121304037
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304037
product: Fc receptor-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041234989.1
SIO_010081: LOC121304037
subclass of: SO_0000673
so part of: LOC121304037
location: join(174129..174498,182535..182570,184947..185240,188017..188271,188602..188895,190830..191084,191604..191897,192601..192876,193804..193905,194105..194135,195504..195683)
location: region:174129-195683:1
so has part: feature:174129-174498:1:exon
so has part: feature:182535-182570:1:exon
so has part: feature:184947-185240:1:exon
so has part: feature:188017-188271:1:exon
so has part: feature:188602-188895:1:exon
so has part: feature:190830-191084:1:exon
so has part: feature:191604-191897:1:exon
so has part: feature:192601-192876:1:exon
so has part: feature:193804-193905:1:exon
so has part: feature:194105-194135:1:exon
so has part: feature:195504-195683:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174129-174498:1:exon

position:174498:1
position: 174498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182535-182570:1:exon

position:182535:1
position: 182535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182570:1
position: 182570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:184947-185240:1:exon

position:184947:1
position: 184947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185240:1
position: 185240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:188017-188271:1:exon

position:188017:1
position: 188017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188271:1
position: 188271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:188602-188895:1:exon

position:188602:1
position: 188602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188895:1
position: 188895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:190830-191084:1:exon

position:190830:1
position: 190830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191084:1
position: 191084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:191604-191897:1:exon

position:191604:1
position: 191604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191897:1
position: 191897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:192601-192876:1:exon

position:192601:1
position: 192601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192876:1
position: 192876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:193804-193905:1:exon

position:193804:1
position: 193804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193905:1
position: 193905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:194105-194135:1:exon

position:194105:1
position: 194105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194135:1
position: 194135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:195504-195683:1:exon

position:195504:1
position: 195504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121304037
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fc receptor-like protein 2
translation: MYTVLQHIVGGSLPICLQLCGHAFISSFCIKLNTKAPSDRMQSCELSLVILLTVVTFSGQYVELPKPRLTLEPPFPEIFTGEAVTLRCGVQGGSADWEYLWYKDREDTPVLQTPAHIITGDSFTISAAAGSDQGQYWCRGQRGDPAQHSQLSDPVKLTVFGKDVILQTPPQPVFDGDTLRCRLRVGNTANRVVFYRNSKVLQAQPGTALDEYRFSKSEEGSYKCRAWWGSSSFQGESAEVRVSVRDEAKPRVTLEPPFPEIFTGEAVTLRCGVQGGSADWEYLWYKDREDTPVLQTPAHIITGDSFTISAAAGSDQGQYWCRGQRGDPAQHSQLSDPVRLNITDKNVILQTPPQPVFDGDTLRCRLRVGNTANRVVFYKNSKVLQAQPGTALDEYHFSKSEEGSYKCRAWWGSSSFQGESAEVRVSVRELPKPRVTLEPPFPEIFTGEAVTLRCGVQGGSADWEYLWYKDREDTPVLQTPAHIITGDSFTISAAAGSDQGQYWCRGQRGDPAQHSQISDPVRLNITELLSWVTLTASPGATVKEGEALNLTCEAAVNKTPRPQLHYSILRDGEPVTNSTDSALYSTASTEKSHAGSYTCAVESQGVRKSSTEILITVEPSWQNAFTAAYRSSFTLLVLTVFTLLLLQYCRIQGSLCYAGAKTRKTKTDQDQDESAMGPEHHSRVY
SIO_010081: LOC121304037
subclass of: SO_0000673
so part of: LOC121304037
location: join(174348..174498,182535..182570,184947..185240,188017..188271,188602..188895,190830..191084,191604..191897,192601..192876,193804..193905,194105..194135,195504..195573)
location: region:174348-195573:1
so has part: feature:174348-174498:1:exon
so has part: feature:182535-182570:1:exon
so has part: feature:184947-185240:1:exon
so has part: feature:188017-188271:1:exon
so has part: feature:188602-188895:1:exon
so has part: feature:190830-191084:1:exon
so has part: feature:191604-191897:1:exon
so has part: feature:192601-192876:1:exon
so has part: feature:193804-193905:1:exon
so has part: feature:194105-194135:1:exon
so has part: feature:195504-195573:1:exon

XP_041090923.1
type: Protein
SIO_000068: ncbiprotein

position:174348:1
position: 174348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195573:1
position: 195573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174348-174498:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182535-182570:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:184947-185240:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188017-188271:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188602-188895:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:190830-191084:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191604-191897:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:192601-192876:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193804-193905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:194105-194135:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:195504-195573:1:exon

LOC121304036
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 196968..221027
location: region:196968-221027:1
so has part: feature:196968-221027:1:exon
subclass of: SO_0000010

121304036
type: Gene
SIO_000068: ncbigene

position:196968:1
position: 196968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221027:1
position: 221027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196968-221027:1:exon

LOC121304036
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304036
product: butyrophilin subfamily 1 member A1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041234987.1
SIO_010081: LOC121304036
subclass of: SO_0000673
so part of: LOC121304036
location: join(196968..197503,198303..198380,199442..199783,200320..200601,201346..201453,201542..201568,204075..204101,204773..204802,213386..213937,214413..214970,215217..215777,218134..221027)
location: region:196968-221027:1
so has part: feature:196968-197503:1:exon
so has part: feature:198303-198380:1:exon
so has part: feature:199442-199783:1:exon
so has part: feature:200320-200601:1:exon
so has part: feature:201346-201453:1:exon
so has part: feature:201542-201568:1:exon
so has part: feature:204075-204101:1:exon
so has part: feature:204773-204802:1:exon
so has part: feature:213386-213937:1:exon
so has part: feature:214413-214970:1:exon
so has part: feature:215217-215777:1:exon
so has part: feature:218134-221027:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196968-197503:1:exon

position:197503:1
position: 197503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:198303-198380:1:exon

position:198303:1
position: 198303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198380:1
position: 198380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:199442-199783:1:exon

position:199442:1
position: 199442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199783:1
position: 199783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:200320-200601:1:exon

position:200320:1
position: 200320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200601:1
position: 200601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:201346-201453:1:exon

position:201346:1
position: 201346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201453:1
position: 201453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:201542-201568:1:exon

position:201542:1
position: 201542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201568:1
position: 201568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:204075-204101:1:exon

position:204075:1
position: 204075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204101:1
position: 204101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:204773-204802:1:exon

position:204773:1
position: 204773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204802:1
position: 204802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:213386-213937:1:exon

position:213386:1
position: 213386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213937:1
position: 213937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:214413-214970:1:exon

position:214413:1
position: 214413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214970:1
position: 214970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:215217-215777:1:exon

position:215217:1
position: 215217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215777:1
position: 215777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:218134-221027:1:exon

position:218134:1
position: 218134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121304036
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304036
product: butyrophilin subfamily 1 member A1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041234986.1
SIO_010081: LOC121304036
subclass of: SO_0000673
so part of: LOC121304036
location: join(196969..197503,198303..198380,199442..199783,200320..200601,201346..201453,201542..201568,204075..204101,204773..204802,204932..204958,213386..213937,214413..214970,215217..215777,218134..221026)
location: region:196969-221026:1
so has part: feature:196969-197503:1:exon
so has part: feature:198303-198380:1:exon
so has part: feature:199442-199783:1:exon
so has part: feature:200320-200601:1:exon
so has part: feature:201346-201453:1:exon
so has part: feature:201542-201568:1:exon
so has part: feature:204075-204101:1:exon
so has part: feature:204773-204802:1:exon
so has part: feature:204932-204958:1:exon
so has part: feature:213386-213937:1:exon
so has part: feature:214413-214970:1:exon
so has part: feature:215217-215777:1:exon
so has part: feature:218134-221026:1:exon

position:196969:1
position: 196969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221026:1
position: 221026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196969-197503:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198303-198380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199442-199783:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200320-200601:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201346-201453:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201542-201568:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204075-204101:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:204773-204802:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204932-204958:1:exon

position:204932:1
position: 204932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204958:1
position: 204958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:213386-213937:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:214413-214970:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:215217-215777:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:218134-221026:1:exon

LOC121304036
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like isoform X1
translation: MKMRFLGMVCLFVWSLLLAVSAQTDGQTVVVSDQPVFADPGEDVTLPCHISPRVNAVDMEVTWFRDKLKSPVHLYQNQIHQTDKQDLSYRGRTALSALQTGDLSLKLRDLRLSDSGVYTCAADDGKWYEEGKIELIVIVLGTQPSISMDSTQEGQARIACTSEDWYPEPAVLWSDRDGNDVTSLSSTRVFKDSQGFVSIRSYIPVKQQSNVFACLLRSKTPKSVRESKLHISKDFFPGVSGWQVAFSLTLALSIAAILPLVLQWIRMDRKEKQLAVNAVVHLRKELESVKREVLKSEWRWICSSAVDVTLDPRTAHPKLLLSEDWKRMRRGETWQEVPENPERFDSMHCVLGREGFTSGRHYWQLHVGGNTQWKLGVCRESAKRKGDFNMAPQEGYWIVEWMESGCKFAALTETTKTPLSLSLKPQKLGVYLDYEEGRLSFYNVDTRSHIYTFTDMEFNPNEKLYPLFWTGDKKTDLVLKSPFWTSPATVDVTLDPDTAHPKLILSHDGKQVRSREILQDLPDSSQRFDYWRCVLGREGFTSGRHYWQVQVGRNTVWRLGVCRESAKRKGKISMSPQQGYWTMCWDKYEVVFTAVTDPETPLPLSVKPWTLGVYLDYEEGQLSFYNVETRFHIYTFTAMEFSPSEKLYPLFHTEDSKTDLVLESSFRTFPPPEASVVDVTLDPDTAHPLLILSPDGKKMRPRETRQHLPDNPERFNRWLCVLGSEGFTSGSRYWQVQVGGNTQWILGACRASAQRKGEFSMSPQQGYWTVEWKSGDENEFTALTDPRTHLSKSLKPQKLGVYLDYEKRRLSFYNVETRSRIYTFTGMEFNPNEKLYPLFWTGDRNINLVLESSFSTPSSEVPGDVSLDPDTTLQDHSVLMSPRPSSP
SIO_010081: LOC121304036
subclass of: SO_0000673
so part of: LOC121304036
location: join(198308..198380,199442..199783,200320..200601,201346..201453,201542..201568,204075..204101,204773..204802,204932..204958,213386..213937,214413..214970,215217..215777,218134..218210)
location: region:198308-218210:1
so has part: feature:198308-198380:1:exon
so has part: feature:199442-199783:1:exon
so has part: feature:200320-200601:1:exon
so has part: feature:201346-201453:1:exon
so has part: feature:201542-201568:1:exon
so has part: feature:204075-204101:1:exon
so has part: feature:204773-204802:1:exon
so has part: feature:204932-204958:1:exon
so has part: feature:213386-213937:1:exon
so has part: feature:214413-214970:1:exon
so has part: feature:215217-215777:1:exon
so has part: feature:218134-218210:1:exon

XP_041090920.1
type: Protein
SIO_000068: ncbiprotein

position:198308:1
position: 198308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218210:1
position: 218210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198308-198380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:199442-199783:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200320-200601:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201346-201453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201542-201568:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:204075-204101:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204773-204802:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:204932-204958:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:213386-213937:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:214413-214970:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:215217-215777:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:218134-218210:1:exon

LOC121304036
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like isoform X2
translation: MKMRFLGMVCLFVWSLLLAVSAQTDGQTVVVSDQPVFADPGEDVTLPCHISPRVNAVDMEVTWFRDKLKSPVHLYQNQIHQTDKQDLSYRGRTALSALQTGDLSLKLRDLRLSDSGVYTCAADDGKWYEEGKIELIVIVLGTQPSISMDSTQEGQARIACTSEDWYPEPAVLWSDRDGNDVTSLSSTRVFKDSQGFVSIRSYIPVKQQSNVFACLLRSKTPKSVRESKLHISKDFFPGVSGWQVAFSLTLALSIAAILPLVLQWIRMDRKEKQLAVNAVVHLRKELESVKREVLKSVDVTLDPRTAHPKLLLSEDWKRMRRGETWQEVPENPERFDSMHCVLGREGFTSGRHYWQLHVGGNTQWKLGVCRESAKRKGDFNMAPQEGYWIVEWMESGCKFAALTETTKTPLSLSLKPQKLGVYLDYEEGRLSFYNVDTRSHIYTFTDMEFNPNEKLYPLFWTGDKKTDLVLKSPFWTSPATVDVTLDPDTAHPKLILSHDGKQVRSREILQDLPDSSQRFDYWRCVLGREGFTSGRHYWQVQVGRNTVWRLGVCRESAKRKGKISMSPQQGYWTMCWDKYEVVFTAVTDPETPLPLSVKPWTLGVYLDYEEGQLSFYNVETRFHIYTFTAMEFSPSEKLYPLFHTEDSKTDLVLESSFRTFPPPEASVVDVTLDPDTAHPLLILSPDGKKMRPRETRQHLPDNPERFNRWLCVLGSEGFTSGSRYWQVQVGGNTQWILGACRASAQRKGEFSMSPQQGYWTVEWKSGDENEFTALTDPRTHLSKSLKPQKLGVYLDYEKRRLSFYNVETRSRIYTFTGMEFNPNEKLYPLFWTGDRNINLVLESSFSTPSSEVPGDVSLDPDTTLQDHSVLMSPRPSSP
SIO_010081: LOC121304036
subclass of: SO_0000673
so part of: LOC121304036
location: join(198308..198380,199442..199783,200320..200601,201346..201453,201542..201568,204075..204101,204773..204802,213386..213937,214413..214970,215217..215777,218134..218210)
location: region:198308-218210:1
so has part: feature:198308-198380:1:exon
so has part: feature:199442-199783:1:exon
so has part: feature:200320-200601:1:exon
so has part: feature:201346-201453:1:exon
so has part: feature:201542-201568:1:exon
so has part: feature:204075-204101:1:exon
so has part: feature:204773-204802:1:exon
so has part: feature:213386-213937:1:exon
so has part: feature:214413-214970:1:exon
so has part: feature:215217-215777:1:exon
so has part: feature:218134-218210:1:exon

XP_041090921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198308-198380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:199442-199783:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200320-200601:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201346-201453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201542-201568:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:204075-204101:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204773-204802:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213386-213937:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:214413-214970:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:215217-215777:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:218134-218210:1:exon

LOC121304036
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304036
product: butyrophilin subfamily 1 member A1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041234988.1
SIO_010081: LOC121304036
subclass of: SO_0000673
so part of: LOC121304036
location: join(199646..199748,200320..200601,201346..201453,201542..201568,204075..204101,204773..204802,204932..204958,213386..213937,214413..214970,215217..215777,218134..221025)
location: region:199646-221025:1
so has part: feature:199646-199748:1:exon
so has part: feature:200320-200601:1:exon
so has part: feature:201346-201453:1:exon
so has part: feature:201542-201568:1:exon
so has part: feature:204075-204101:1:exon
so has part: feature:204773-204802:1:exon
so has part: feature:204932-204958:1:exon
so has part: feature:213386-213937:1:exon
so has part: feature:214413-214970:1:exon
so has part: feature:215217-215777:1:exon
so has part: feature:218134-221025:1:exon

position:199646:1
position: 199646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221025:1
position: 221025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199646-199748:1:exon

position:199748:1
position: 199748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200320-200601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201346-201453:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201542-201568:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204075-204101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:204773-204802:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204932-204958:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213386-213937:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:214413-214970:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:215217-215777:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:218134-221025:1:exon

LOC121304036
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121304036 isoform X3
translation: MMANVLGTQPSISMDSTQEGQARIACTSEDWYPEPAVLWSDRDGNDVTSLSSTRVFKDSQGFVSIRSYIPVKQQSNVFACLLRSKTPKSVRESKLHISKDFFPGVSGWQVAFSLTLALSIAAILPLVLQWIRMDRKEKQLAVNAVVHLRKELESVKREVLKSEWRWICSSAVDVTLDPRTAHPKLLLSEDWKRMRRGETWQEVPENPERFDSMHCVLGREGFTSGRHYWQLHVGGNTQWKLGVCRESAKRKGDFNMAPQEGYWIVEWMESGCKFAALTETTKTPLSLSLKPQKLGVYLDYEEGRLSFYNVDTRSHIYTFTDMEFNPNEKLYPLFWTGDKKTDLVLKSPFWTSPATVDVTLDPDTAHPKLILSHDGKQVRSREILQDLPDSSQRFDYWRCVLGREGFTSGRHYWQVQVGRNTVWRLGVCRESAKRKGKISMSPQQGYWTMCWDKYEVVFTAVTDPETPLPLSVKPWTLGVYLDYEEGQLSFYNVETRFHIYTFTAMEFSPSEKLYPLFHTEDSKTDLVLESSFRTFPPPEASVVDVTLDPDTAHPLLILSPDGKKMRPRETRQHLPDNPERFNRWLCVLGSEGFTSGSRYWQVQVGGNTQWILGACRASAQRKGEFSMSPQQGYWTVEWKSGDENEFTALTDPRTHLSKSLKPQKLGVYLDYEKRRLSFYNVETRSRIYTFTGMEFNPNEKLYPLFWTGDRNINLVLESSFSTPSSEVPGDVSLDPDTTLQDHSVLMSPRPSSP
SIO_010081: LOC121304036
subclass of: SO_0000673
so part of: LOC121304036
location: join(199736..199748,200320..200601,201346..201453,201542..201568,204075..204101,204773..204802,204932..204958,213386..213937,214413..214970,215217..215777,218134..218210)
location: region:199736-218210:1
so has part: feature:199736-199748:1:exon
so has part: feature:200320-200601:1:exon
so has part: feature:201346-201453:1:exon
so has part: feature:201542-201568:1:exon
so has part: feature:204075-204101:1:exon
so has part: feature:204773-204802:1:exon
so has part: feature:204932-204958:1:exon
so has part: feature:213386-213937:1:exon
so has part: feature:214413-214970:1:exon
so has part: feature:215217-215777:1:exon
so has part: feature:218134-218210:1:exon

XP_041090922.1
type: Protein
SIO_000068: ncbiprotein

position:199736:1
position: 199736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199736-199748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200320-200601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201346-201453:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201542-201568:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204075-204101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:204773-204802:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204932-204958:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213386-213937:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:214413-214970:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:215217-215777:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:218134-218210:1:exon

LOC121303943
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303943
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(242793..244798)
location: region:242793-244798:-1
so has part: feature:242793-244798:-1:exon

121303943
type: Gene
SIO_000068: ncbigene

position:242793:-1
position: 242793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244798:-1
position: 244798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242793-244798:-1:exon

LOC121303943
type: Exon
subclass of: SO_0000147
RO_0002162: 7913
gene: LOC121303943
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121303943
subclass of: SO_0000673
so part of: LOC121303943
location: complement(242793..243747)
location: region:242793-243747:-1
so has part: feature:242793-243747:-1:exon

position:243747:-1
position: 243747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242793-243747:-1:exon

LOC121303943
type: Exon
subclass of: SO_0000147
RO_0002162: 7913
gene: LOC121303943
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC121303943
subclass of: SO_0000673
so part of: LOC121303943
location: complement(243895..244798)
location: region:243895-244798:-1
so has part: feature:243895-244798:-1:exon

position:243895:-1
position: 243895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243895-244798:-1:exon

LOC121304056
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 253507..269232
location: region:253507-269232:1
so has part: feature:253507-269232:1:exon
subclass of: SO_0000010

121304056
type: Gene
SIO_000068: ncbigene

position:253507:1
position: 253507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269232:1
position: 269232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253507-269232:1:exon

LOC121304056
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304056
product: reticulon-4 receptor-like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_041235018.1
SIO_010081: LOC121304056
subclass of: SO_0000673
so part of: LOC121304056
location: join(253507..254416,259521..259747,260215..260472,268211..269232)
location: region:253507-269232:1
so has part: feature:253507-254416:1:exon
so has part: feature:259521-259747:1:exon
so has part: feature:260215-260472:1:exon
so has part: feature:268211-269232:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:253507-254416:1:exon

position:254416:1
position: 254416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:259521-259747:1:exon

position:259521:1
position: 259521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259747:1
position: 259747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:260215-260472:1:exon

position:260215:1
position: 260215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260472:1
position: 260472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:268211-269232:1:exon

position:268211:1
position: 268211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121304056
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulon-4 receptor-like 2
translation: MGTRSNLRSGSRTRNFKGSVSVWLLLWLAVCSPSPAYSCPRLCVCYPSPMMVSCQSQNFSAVPAGIPYDSQRVFLQNNRITELQAQSFGFQTQVLWLNSNNISSIKPDSFSDMRDLEELDLGDNPFLRTLHPDSFRGLDKLQSLHMYRCQLGTLPGNIFKKLYSLQFLYLQDNLLQHIQDNLFSDLVNLTHLFLHGNRIRVLSENVFRGLVNLDRLLLHENRVRQVNRKAFRDLGHLTTLFLFNNALTDLPASALSDLSSLQFLRLNGNPWSCSCQARPLWEWFRQVRISSSELLCAGPEERKGLDLRFLREIDFAPCPLLPYYPRARATYTFSTRTRWWFPKSGKASGGNSDKSKGLDGKKGQQEDNSYISPDKSQTKSYEAESTLPKVKEQDYWEKYENEDSTIRCYELDCLKEANGKSRGVRPDTSLFLLSLSLTLTLSLTLHFLFPETM
SIO_010081: LOC121304056
subclass of: SO_0000673
so part of: LOC121304056
location: join(254365..254416,259521..259747,260215..260472,268211..269035)
location: region:254365-269035:1
so has part: feature:254365-254416:1:exon
so has part: feature:259521-259747:1:exon
so has part: feature:260215-260472:1:exon
so has part: feature:268211-269035:1:exon

XP_041090952.1
type: Protein
SIO_000068: ncbiprotein

position:254365:1
position: 254365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269035:1
position: 269035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254365-254416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:259521-259747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260215-260472:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:268211-269035:1:exon

LOC121304072
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304072
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(342271..344551)
location: region:342271-344551:-1
so has part: feature:342271-344551:-1:exon
subclass of: SO_0000010

121304072
type: Gene
SIO_000068: ncbigene

position:342271:-1
position: 342271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344551:-1
position: 344551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342271-344551:-1:exon

LOC121304072
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304072
product: uncharacterized LOC121304072
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041235042.1
SIO_010081: LOC121304072
subclass of: SO_0000673
so part of: LOC121304072
location: complement(join(342271..342609,343562..343607,343784..343894,344316..344551))
location: region:342271-344551:-1
so has part: feature:344316-344551:-1:exon
so has part: feature:343784-343894:-1:exon
so has part: feature:343562-343607:-1:exon
so has part: feature:342271-342609:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344316-344551:-1:exon

position:344316:-1
position: 344316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:343784-343894:-1:exon

position:343784:-1
position: 343784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343894:-1
position: 343894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:343562-343607:-1:exon

position:343562:-1
position: 343562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343607:-1
position: 343607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:342271-342609:-1:exon

position:342609:-1
position: 342609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121304072
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304072
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121304072
translation: MQPTASLLLSMPPSISHPLYHSAVCVLIPSLSCLPLRKCFFLRTDEMLATLMTVLFLVVRTVEQLTAGLFHEELQPYLVYQPLPWQVQCVSHNRRGSRLDEKDGSSRHRSTGGVRRICSSVSGELPRPSHTVASPEKAAVMIQTQYRKYQQRKQKDPKNA
SIO_010081: LOC121304072
subclass of: SO_0000673
so part of: LOC121304072
location: complement(join(342476..342609,343562..343607,343784..343894,344316..344507))
location: region:342476-344507:-1
so has part: feature:344316-344507:-1:exon
so has part: feature:343784-343894:-1:exon
so has part: feature:343562-343607:-1:exon
so has part: feature:342476-342609:-1:exon

XP_041090976.1
type: Protein
SIO_000068: ncbiprotein

position:342476:-1
position: 342476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344507:-1
position: 344507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344316-344507:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343784-343894:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:343562-343607:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:342476-342609:-1:exon

LOC121303945
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303945
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(351424..502965)
location: region:351424-502965:-1
so has part: feature:351424-502965:-1:exon
subclass of: SO_0000010

121303945
type: Gene
SIO_000068: ncbigene

position:351424:-1
position: 351424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502965:-1
position: 502965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351424-502965:-1:exon

LOC121303945
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303945
product: Down syndrome cell adhesion molecule-like protein 1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041234845.1
SIO_010081: LOC121303945
subclass of: SO_0000673
so part of: LOC121303945
location: complement(join(351424..351505,351824..351979,353299..353586,353938..354126,360007..360105,360343..360506,360667..360784,362025..362178,366003..366142,375425..375580,376340..376486,384488..384728,385145..385215,392607..392774,395254..395382,395702..395798,396032..396231,399411..399587,400920..401039,402301..402579,405084..405404,405724..405893,405976..406336,409448..409744,410411..410686,412642..412920,416938..417084,486129..486275,490890..491207,502780..502965))
location: region:351424-502965:-1
so has part: feature:502780-502965:-1:exon
so has part: feature:490890-491207:-1:exon
so has part: feature:486129-486275:-1:exon
so has part: feature:416938-417084:-1:exon
so has part: feature:412642-412920:-1:exon
so has part: feature:410411-410686:-1:exon
so has part: feature:409448-409744:-1:exon
so has part: feature:405976-406336:-1:exon
so has part: feature:405724-405893:-1:exon
so has part: feature:405084-405404:-1:exon
so has part: feature:402301-402579:-1:exon
so has part: feature:400920-401039:-1:exon
so has part: feature:399411-399587:-1:exon
so has part: feature:396032-396231:-1:exon
so has part: feature:395702-395798:-1:exon
so has part: feature:395254-395382:-1:exon
so has part: feature:392607-392774:-1:exon
so has part: feature:385145-385215:-1:exon
so has part: feature:384488-384728:-1:exon
so has part: feature:376340-376486:-1:exon
so has part: feature:375425-375580:-1:exon
so has part: feature:366003-366142:-1:exon
so has part: feature:362025-362178:-1:exon
so has part: feature:360667-360784:-1:exon
so has part: feature:360343-360506:-1:exon
so has part: feature:360007-360105:-1:exon
so has part: feature:353938-354126:-1:exon
so has part: feature:353299-353586:-1:exon
so has part: feature:351824-351979:-1:exon
so has part: feature:351424-351505:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:502780-502965:-1:exon

position:502780:-1
position: 502780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:490890-491207:-1:exon

position:490890:-1
position: 490890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491207:-1
position: 491207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:486129-486275:-1:exon

position:486129:-1
position: 486129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486275:-1
position: 486275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:416938-417084:-1:exon

position:416938:-1
position: 416938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417084:-1
position: 417084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:412642-412920:-1:exon

position:412642:-1
position: 412642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412920:-1
position: 412920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:410411-410686:-1:exon

position:410411:-1
position: 410411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410686:-1
position: 410686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:409448-409744:-1:exon

position:409448:-1
position: 409448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409744:-1
position: 409744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:405976-406336:-1:exon

position:405976:-1
position: 405976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406336:-1
position: 406336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:405724-405893:-1:exon

position:405724:-1
position: 405724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405893:-1
position: 405893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:405084-405404:-1:exon

position:405084:-1
position: 405084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405404:-1
position: 405404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:402301-402579:-1:exon

position:402301:-1
position: 402301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402579:-1
position: 402579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:400920-401039:-1:exon

position:400920:-1
position: 400920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401039:-1
position: 401039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:399411-399587:-1:exon

position:399411:-1
position: 399411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399587:-1
position: 399587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:396032-396231:-1:exon

position:396032:-1
position: 396032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396231:-1
position: 396231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:395702-395798:-1:exon

position:395702:-1
position: 395702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395798:-1
position: 395798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:395254-395382:-1:exon

position:395254:-1
position: 395254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395382:-1
position: 395382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:392607-392774:-1:exon

position:392607:-1
position: 392607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392774:-1
position: 392774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:385145-385215:-1:exon

position:385145:-1
position: 385145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385215:-1
position: 385215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:384488-384728:-1:exon

position:384488:-1
position: 384488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384728:-1
position: 384728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:376340-376486:-1:exon

position:376340:-1
position: 376340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376486:-1
position: 376486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:375425-375580:-1:exon

position:375425:-1
position: 375425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375580:-1
position: 375580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:366003-366142:-1:exon

position:366003:-1
position: 366003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366142:-1
position: 366142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:362025-362178:-1:exon

position:362025:-1
position: 362025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362178:-1
position: 362178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:360667-360784:-1:exon

position:360667:-1
position: 360667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360784:-1
position: 360784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:360343-360506:-1:exon

position:360343:-1
position: 360343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360506:-1
position: 360506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:360007-360105:-1:exon

position:360007:-1
position: 360007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360105:-1
position: 360105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:353938-354126:-1:exon

position:353938:-1
position: 353938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354126:-1
position: 354126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:353299-353586:-1:exon

position:353299:-1
position: 353299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353586:-1
position: 353586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:351824-351979:-1:exon

position:351824:-1
position: 351824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351979:-1
position: 351979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:351424-351505:-1:exon

position:351505:-1
position: 351505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121303945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303945
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Down syndrome cell adhesion molecule-like protein 1 homolog
translation: MWLVTFFLLYSLQKARSEDVGPSLYFVNDSVQQLTFSSAVGAVIPCPASGSPSAGLRWYLATGDDIYDVPHIRHVHANGTLQLYPFPPSAFNSFIHDNDYFCTADNSAGKIRSTSIRVKAVFREPYTVRVEDQRSMRGNVAVFKCLIPSAVQEYVNVVSWEKDTVSIVPGSRFFITSYGALYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVLDPTESTPAILDSFQSREMGAGHSVELACIASGYPNPAIRWLKDGRPLPADSRRTKRLTGLTISDLRLEDSGHYICEVTNTFGSAEVTGHLNVIDPLRVTLTPKKLKTGIGSTVILSCAVQGSPEFTIRWYRNTELVSPDDYISIRGINNETLLITAAQKSHSGAYQCFATRKSQTAQDFSVILLEDGTPRIVSSFSERVVNPGEQFSLMCSAKAAPPPSLSWTLDDEPIARDGTHRTNQYAMSDGSTVSHMNVTSPQIRDGGVYRCTARNSAGSAEYQARINVRGPPSIRAMRNITAVAGRDTFINCRVIGYPYYSIKWYKDSLLLPDNHRQFVYENGTLKLMDVQKGMDEGEYMCSVLIQPQLSISQSVHVTVKDTGAAPLSVYHSLNRILSITLSHCSPSARAQSVHITVKDTGAAPLSVYHSLTVYHSELALLPSISQSVRVSGLKGGYRVHPRSVSHGKRVGLGHRGSGQRQMSCGAKRPMRNITAVAGRDTFINCRVIGYPYYSIKWYKDSLLLPDNHRQFVYENGTLKLMDVQKGMDEGEYMCSVLIQPQLSISQSVHVTVKVPPLIQPFDFPPASIGQLLYIPCVVSSGDMPISITWRKDGQVIVSGAGVTIETKEFMSSLQISSVSLKHNGNYTCIASNDAATMSRERQLIVRVPPRFVVQPNNQDGIYSKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYHPVPLTNRIQILGNGSLLIRHVLEDDMGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPNTTIAIKGQSKELNCTARGERPIIIRWEKADTVIDPDRNARYAIATKDSGDEVISTLRLKPADRGDSVIFSCHAINSYGENRGLIQLTVQEPPDPPELEVREVKARSMNLRWTQRFDGNSIITSFDIEYKNKSESWDFKHATRNISPTINQANIVELHPAQIYSIRMYSFNKIGRSEASKDLTIRTEEAAPDGPPMEVILQPMTSQSIRVTWKAPRKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRVMSITSDVAVLSWSEPPRITLNGVLKGYRVVFWSLFPDGEWGEMQNITTTRERVELKGLEKFTNYSVQVLAYTQAGDGVRSSMLYIQTKEDIPGPPAGIKAVPSSASSVVVSWLPPTKPNGIIRKYTIFCSSPGSGQPAPSEYETSPELLFYRIAHLNRGQQYLLWVAAVTSAGRGNISEKVTVEPAGKAPAKIISFGGTVTTPWMKDVRLPCSSVGEPAPTIKWTKDSEDSAIPVMLDGQRLILADGTLVLRAVKAEDSGYYTCTATNTLGFDTIIINLQVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSTERSFKLDNLKCGTWYKVKLAAKNSVGAGRISEIIEAKTFGREPSFNKDQHLFTHLNSTHARLHLQGWNNGGCPINAILLEFRPKGTWAWHTLRTNTSADLFLAELREATWYELRMKACNSAGCGNESVPFATLDYDGSTIPPIKSARDEGDDVKKLFTIACPVILVTLGAALLFIIRKKRKEKRLKRLRDAKSLAEMLIR
SIO_010081: LOC121303945
subclass of: SO_0000673
so part of: LOC121303945
location: complement(join(351471..351505,351824..351979,353299..353586,353938..354126,360007..360105,360343..360506,360667..360784,362025..362178,366003..366142,375425..375580,376340..376486,384488..384728,385145..385215,392607..392774,395254..395382,395702..395798,396032..396231,399411..399587,400920..401039,402301..402579,405084..405404,405724..405893,405976..406336,409448..409744,410411..410686,412642..412920,416938..417084,486129..486275,490890..491207,502780..502822))
location: region:351471-502822:-1
so has part: feature:502780-502822:-1:exon
so has part: feature:490890-491207:-1:exon
so has part: feature:486129-486275:-1:exon
so has part: feature:416938-417084:-1:exon
so has part: feature:412642-412920:-1:exon
so has part: feature:410411-410686:-1:exon
so has part: feature:409448-409744:-1:exon
so has part: feature:405976-406336:-1:exon
so has part: feature:405724-405893:-1:exon
so has part: feature:405084-405404:-1:exon
so has part: feature:402301-402579:-1:exon
so has part: feature:400920-401039:-1:exon
so has part: feature:399411-399587:-1:exon
so has part: feature:396032-396231:-1:exon
so has part: feature:395702-395798:-1:exon
so has part: feature:395254-395382:-1:exon
so has part: feature:392607-392774:-1:exon
so has part: feature:385145-385215:-1:exon
so has part: feature:384488-384728:-1:exon
so has part: feature:376340-376486:-1:exon
so has part: feature:375425-375580:-1:exon
so has part: feature:366003-366142:-1:exon
so has part: feature:362025-362178:-1:exon
so has part: feature:360667-360784:-1:exon
so has part: feature:360343-360506:-1:exon
so has part: feature:360007-360105:-1:exon
so has part: feature:353938-354126:-1:exon
so has part: feature:353299-353586:-1:exon
so has part: feature:351824-351979:-1:exon
so has part: feature:351471-351505:-1:exon

XP_041090779.1
type: Protein
SIO_000068: ncbiprotein

position:351471:-1
position: 351471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502822:-1
position: 502822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502780-502822:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490890-491207:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:486129-486275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:416938-417084:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:412642-412920:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:410411-410686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:409448-409744:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:405976-406336:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:405724-405893:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:405084-405404:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:402301-402579:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:400920-401039:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:399411-399587:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:396032-396231:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:395702-395798:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:395254-395382:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:392607-392774:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:385145-385215:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:384488-384728:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:376340-376486:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:375425-375580:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:366003-366142:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:362025-362178:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:360667-360784:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:360343-360506:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:360007-360105:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:353938-354126:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:353299-353586:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:351824-351979:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:351471-351505:-1:exon

LOC121303926
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(516547..518499)
location: region:516547-518499:-1
so has part: feature:516547-518499:-1:exon
subclass of: SO_0000011

121303926
type: Gene
SIO_000068: ncbigene

position:516547:-1
position: 516547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518499:-1
position: 518499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516547-518499:-1:exon

LOC121303926
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: lncRNA
gene: LOC121303926
product: uncharacterized LOC121303926
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005947892.1
SIO_010081: LOC121303926
subclass of: SO_0000673
so part of: LOC121303926
location: complement(join(516547..516600,517541..517576,518439..518499))
location: region:516547-518499:-1
so has part: feature:518439-518499:-1:exon
so has part: feature:517541-517576:-1:exon
so has part: feature:516547-516600:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:518439-518499:-1:exon

position:518439:-1
position: 518439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:517541-517576:-1:exon

position:517541:-1
position: 517541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517576:-1
position: 517576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:516547-516600:-1:exon

position:516600:-1
position: 516600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121304093
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304093
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(528960..539118)
location: region:528960-539118:-1
so has part: feature:528960-539118:-1:exon
subclass of: SO_0000011

121304093
type: Gene
SIO_000068: ncbigene

position:528960:-1
position: 528960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539118:-1
position: 539118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528960-539118:-1:exon

LOC121304093
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: lncRNA
gene: LOC121304093
product: uncharacterized LOC121304093
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005947917.1
SIO_010081: LOC121304093
subclass of: SO_0000673
so part of: LOC121304093
location: complement(join(528960..529088,533533..533558,533916..533990,534245..534268,536416..536522,539005..539118))
location: region:528960-539118:-1
so has part: feature:539005-539118:-1:exon
so has part: feature:536416-536522:-1:exon
so has part: feature:534245-534268:-1:exon
so has part: feature:533916-533990:-1:exon
so has part: feature:533533-533558:-1:exon
so has part: feature:528960-529088:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:539005-539118:-1:exon

position:539005:-1
position: 539005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:536416-536522:-1:exon

position:536416:-1
position: 536416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536522:-1
position: 536522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:534245-534268:-1:exon

position:534245:-1
position: 534245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534268:-1
position: 534268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:533916-533990:-1:exon

position:533916:-1
position: 533916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533990:-1
position: 533990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:533533-533558:-1:exon

position:533533:-1
position: 533533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533558:-1
position: 533558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:528960-529088:-1:exon

position:529088:-1
position: 529088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fxyd6
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: fxyd6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(539751..556673)
location: region:539751-556673:-1
so has part: feature:539751-556673:-1:exon
subclass of: SO_0000010

121303990
type: Gene
SIO_000068: ncbigene

position:539751:-1
position: 539751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556673:-1
position: 556673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539751-556673:-1:exon

fxyd6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: fxyd6
product: FXYD domain containing ion transport regulator 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_041234899.1
SIO_010081: fxyd6
subclass of: SO_0000673
so part of: fxyd6
location: complement(join(539751..540849,541377..541422,541756..541805,541925..541961,542363..542433,543463..543504,543643..543666,546432..546485,555189..556673))
location: region:539751-556673:-1
so has part: feature:555189-556673:-1:exon
so has part: feature:546432-546485:-1:exon
so has part: feature:543643-543666:-1:exon
so has part: feature:543463-543504:-1:exon
so has part: feature:542363-542433:-1:exon
so has part: feature:541925-541961:-1:exon
so has part: feature:541756-541805:-1:exon
so has part: feature:541377-541422:-1:exon
so has part: feature:539751-540849:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:555189-556673:-1:exon

position:555189:-1
position: 555189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:546432-546485:-1:exon

position:546432:-1
position: 546432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546485:-1
position: 546485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:543643-543666:-1:exon

position:543643:-1
position: 543643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543666:-1
position: 543666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:543463-543504:-1:exon

position:543463:-1
position: 543463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543504:-1
position: 543504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:542363-542433:-1:exon

position:542363:-1
position: 542363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542433:-1
position: 542433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:541925-541961:-1:exon

position:541925:-1
position: 541925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541961:-1
position: 541961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:541756-541805:-1:exon

position:541756:-1
position: 541756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541805:-1
position: 541805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:541377-541422:-1:exon

position:541377:-1
position: 541377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541422:-1
position: 541422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:539751-540849:-1:exon

position:540849:-1
position: 540849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fxyd6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: fxyd6
product: FXYD domain containing ion transport regulator 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_041234901.1
SIO_010081: fxyd6
subclass of: SO_0000673
so part of: fxyd6
location: complement(join(539751..540849,541377..541422,541756..541805,541925..541961,542359..542433,543463..543504,543643..543666,546432..546485,555189..556661))
location: region:539751-556661:-1
so has part: feature:555189-556661:-1:exon
so has part: feature:546432-546485:-1:exon
so has part: feature:543643-543666:-1:exon
so has part: feature:543463-543504:-1:exon
so has part: feature:542359-542433:-1:exon
so has part: feature:541925-541961:-1:exon
so has part: feature:541756-541805:-1:exon
so has part: feature:541377-541422:-1:exon
so has part: feature:539751-540849:-1:exon

position:556661:-1
position: 556661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555189-556661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:546432-546485:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543643-543666:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:543463-543504:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542359-542433:-1:exon

position:542359:-1
position: 542359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:541925-541961:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541756-541805:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541377-541422:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539751-540849:-1:exon

fxyd6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: fxyd6
product: FXYD domain containing ion transport regulator 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041234900.1
SIO_010081: fxyd6
subclass of: SO_0000673
so part of: fxyd6
location: complement(join(539751..540849,541377..541422,541756..541805,541925..541961,542363..542433,543463..543504,543643..543666,546432..546485,554688..554864))
location: region:539751-554864:-1
so has part: feature:554688-554864:-1:exon
so has part: feature:546432-546485:-1:exon
so has part: feature:543643-543666:-1:exon
so has part: feature:543463-543504:-1:exon
so has part: feature:542363-542433:-1:exon
so has part: feature:541925-541961:-1:exon
so has part: feature:541756-541805:-1:exon
so has part: feature:541377-541422:-1:exon
so has part: feature:539751-540849:-1:exon

position:554864:-1
position: 554864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554688-554864:-1:exon

position:554688:-1
position: 554688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:546432-546485:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543643-543666:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:543463-543504:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542363-542433:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:541925-541961:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541756-541805:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541377-541422:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539751-540849:-1:exon

fxyd6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: fxyd6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FXYD domain-containing ion transport regulator 6 isoform X1
translation: METALLFLCSLLVYVATADIHNASDDKDKDKELDPFNYDYKTLRIGGLVFAVVLFTLGILLIAEDAAAVSTRSPGSQERRKLKQRTSSLPRCQPLLKHRKWRTERSG
SIO_010081: fxyd6
subclass of: SO_0000673
so part of: fxyd6
location: complement(join(540845..540849,541377..541422,541756..541805,541925..541961,542363..542433,543463..543504,543643..543666,546432..546480))
location: region:540845-546480:-1
so has part: feature:546432-546480:-1:exon
so has part: feature:543643-543666:-1:exon
so has part: feature:543463-543504:-1:exon
so has part: feature:542363-542433:-1:exon
so has part: feature:541925-541961:-1:exon
so has part: feature:541756-541805:-1:exon
so has part: feature:541377-541422:-1:exon
so has part: feature:540845-540849:-1:exon

XP_041090833.1
type: Protein
SIO_000068: ncbiprotein

position:540845:-1
position: 540845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546480:-1
position: 546480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546432-546480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:543643-543666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543463-543504:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542363-542433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541925-541961:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:541756-541805:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541377-541422:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540845-540849:-1:exon

fxyd6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: fxyd6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FXYD domain-containing ion transport regulator 6 isoform X1
translation: METALLFLCSLLVYVATADIHNASDDKDKDKELDPFNYDYKTLRIGGLVFAVVLFTLGILLIAEDAAAVSTRSPGSQERRKLKQRTSSLPRCQPLLKHRKWRTERSG
SIO_010081: fxyd6
subclass of: SO_0000673
so part of: fxyd6
location: complement(join(540845..540849,541377..541422,541756..541805,541925..541961,542363..542433,543463..543504,543643..543666,546432..546480))
location: region:540845-546480:-1
so has part: feature:546432-546480:-1:exon
so has part: feature:543643-543666:-1:exon
so has part: feature:543463-543504:-1:exon
so has part: feature:542363-542433:-1:exon
so has part: feature:541925-541961:-1:exon
so has part: feature:541756-541805:-1:exon
so has part: feature:541377-541422:-1:exon
so has part: feature:540845-540849:-1:exon

XP_041090834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546432-546480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:543643-543666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543463-543504:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542363-542433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541925-541961:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:541756-541805:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541377-541422:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540845-540849:-1:exon

fxyd6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: fxyd6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FXYD domain-containing ion transport regulator 6 isoform X2
translation: METALLFLCSLLVYVATADIHNASDDKDKDKELDPFNYDYKTLRIGGLVFAVVLFTLGILLIVSRRCRCSFNQKPRVPGEEEAQAENLITSKVSATAETPKVEN
SIO_010081: fxyd6
subclass of: SO_0000673
so part of: fxyd6
location: complement(join(541385..541422,541756..541805,541925..541961,542359..542433,543463..543504,543643..543666,546432..546480))
location: region:541385-546480:-1
so has part: feature:546432-546480:-1:exon
so has part: feature:543643-543666:-1:exon
so has part: feature:543463-543504:-1:exon
so has part: feature:542359-542433:-1:exon
so has part: feature:541925-541961:-1:exon
so has part: feature:541756-541805:-1:exon
so has part: feature:541385-541422:-1:exon

XP_041090835.1
type: Protein
SIO_000068: ncbiprotein

position:541385:-1
position: 541385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546432-546480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:543643-543666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543463-543504:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542359-542433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541925-541961:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:541756-541805:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541385-541422:-1:exon

tmprss13a
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: tmprss13a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(558019..569409)
location: region:558019-569409:-1
so has part: feature:558019-569409:-1:exon
subclass of: SO_0000010

121303989
type: Gene
SIO_000068: ncbigene

position:558019:-1
position: 558019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569409:-1
position: 569409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558019-569409:-1:exon

tmprss13a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: tmprss13a
product: transmembrane serine protease 13a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_041234898.1
SIO_010081: tmprss13a
subclass of: SO_0000673
so part of: tmprss13a
location: complement(join(558019..558768,558926..559078,559477..559619,559990..560088,560841..561013,562615..562777,563223..563260,563572..563667,563818..563944,564301..564438,564701..564808,565085..565247,569256..569409))
location: region:558019-569409:-1
so has part: feature:569256-569409:-1:exon
so has part: feature:565085-565247:-1:exon
so has part: feature:564701-564808:-1:exon
so has part: feature:564301-564438:-1:exon
so has part: feature:563818-563944:-1:exon
so has part: feature:563572-563667:-1:exon
so has part: feature:563223-563260:-1:exon
so has part: feature:562615-562777:-1:exon
so has part: feature:560841-561013:-1:exon
so has part: feature:559990-560088:-1:exon
so has part: feature:559477-559619:-1:exon
so has part: feature:558926-559078:-1:exon
so has part: feature:558019-558768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:569256-569409:-1:exon

position:569256:-1
position: 569256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565085-565247:-1:exon

position:565085:-1
position: 565085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565247:-1
position: 565247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:564701-564808:-1:exon

position:564701:-1
position: 564701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564808:-1
position: 564808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:564301-564438:-1:exon

position:564301:-1
position: 564301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564438:-1
position: 564438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:563818-563944:-1:exon

position:563818:-1
position: 563818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563944:-1
position: 563944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:563572-563667:-1:exon

position:563572:-1
position: 563572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563667:-1
position: 563667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:563223-563260:-1:exon

position:563223:-1
position: 563223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563260:-1
position: 563260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:562615-562777:-1:exon

position:562615:-1
position: 562615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562777:-1
position: 562777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:560841-561013:-1:exon

position:560841:-1
position: 560841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561013:-1
position: 561013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:559990-560088:-1:exon

position:559990:-1
position: 559990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560088:-1
position: 560088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:559477-559619:-1:exon

position:559477:-1
position: 559477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559619:-1
position: 559619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:558926-559078:-1:exon

position:558926:-1
position: 558926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559078:-1
position: 559078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:558019-558768:-1:exon

position:558768:-1
position: 558768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tmprss13a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: tmprss13a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protease serine 13a
translation: MTSTLNDRPPPYYASPVQPPSYASAVNHSTIGQGSNYQPYYIPPPASVPPPSYVAQERRPISPKSKLCGGKKRCFSSSGGCLILCGLVAVAIWLGVRYGSKILSDVINNKNSTYVAETCPAGTQYCDGKAECSQGGDELGCVRFGSNYSLQVMNSKDMKFYPVCSTNWSDSFSDKTCKQLGFNGFYKTDTFVSSSPALTVSPSKPSQNIQGQLQINSACQGCVSLECIACGVQKGSGRIIGGAPSTLGKWPWQVSLHHNNYPTCGGTIVAPSFVITAAHCFPSTEYKNAGSWKVYAGVVSQASLTPPLYVSKIIINERYSGTNNDFDIAVMRLKRPVTFSSTVQPVCLPTFDQVFATGTACWTTGFGTLQSGASSGSPNLMEVSVNIIDQSTCNGPKVYNGVLTPNMMCAGNLQGGVDSCQGDSGGPLVCKVADRWYLAGVTSWGVGCGLKNKPGVYTRVTQQLSWVYSCMEAEKP
SIO_010081: tmprss13a
subclass of: SO_0000673
so part of: tmprss13a
location: complement(join(558754..558768,558926..559078,559477..559619,559990..560088,560841..561013,562615..562777,563223..563260,563572..563667,563818..563944,564301..564438,564701..564808,565085..565247,569256..569270))
location: region:558754-569270:-1
so has part: feature:569256-569270:-1:exon
so has part: feature:565085-565247:-1:exon
so has part: feature:564701-564808:-1:exon
so has part: feature:564301-564438:-1:exon
so has part: feature:563818-563944:-1:exon
so has part: feature:563572-563667:-1:exon
so has part: feature:563223-563260:-1:exon
so has part: feature:562615-562777:-1:exon
so has part: feature:560841-561013:-1:exon
so has part: feature:559990-560088:-1:exon
so has part: feature:559477-559619:-1:exon
so has part: feature:558926-559078:-1:exon
so has part: feature:558754-558768:-1:exon

XP_041090832.1
type: Protein
SIO_000068: ncbiprotein

position:558754:-1
position: 558754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569270:-1
position: 569270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569256-569270:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565085-565247:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:564701-564808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:564301-564438:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563818-563944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563572-563667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:563223-563260:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:562615-562777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:560841-561013:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:559990-560088:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:559477-559619:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:558926-559078:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:558754-558768:-1:exon

il10ra
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: il10ra
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 588443..599287
location: region:588443-599287:1
so has part: feature:588443-599287:1:exon
subclass of: SO_0000010

121304049
type: Gene
SIO_000068: ncbigene

position:588443:1
position: 588443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599287:1
position: 599287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588443-599287:1:exon

il10ra
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: il10ra
product: interleukin 10 receptor, alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_041235008.1
SIO_010081: il10ra
subclass of: SO_0000673
so part of: il10ra
location: join(588443..588718,594204..594324,594669..594847,594946..595097,595815..595965,596134..596255,596877..599287)
location: region:588443-599287:1
so has part: feature:588443-588718:1:exon
so has part: feature:594204-594324:1:exon
so has part: feature:594669-594847:1:exon
so has part: feature:594946-595097:1:exon
so has part: feature:595815-595965:1:exon
so has part: feature:596134-596255:1:exon
so has part: feature:596877-599287:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:588443-588718:1:exon

position:588718:1
position: 588718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:594204-594324:1:exon

position:594204:1
position: 594204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594324:1
position: 594324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:594669-594847:1:exon

position:594669:1
position: 594669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594847:1
position: 594847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:594946-595097:1:exon

position:594946:1
position: 594946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595097:1
position: 595097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:595815-595965:1:exon

position:595815:1
position: 595815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595965:1
position: 595965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:596134-596255:1:exon

position:596134:1
position: 596134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596255:1
position: 596255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:596877-599287:1:exon

position:596877:1
position: 596877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

il10ra
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: il10ra
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-10 receptor subunit alpha
translation: MAEWNWVPVVFAILRLCCSVAGQDLRPPRNLTVVSVNTRVVLLWAPPEGAPQAVQYNVLYKRYDSKKKWNKEKGCQRTNSTSCDLSNKLTQREAFYLARVRTVFQNWTSDWAITKRFQLRDTVLEPPGCDVTVTVHSFLVRLSLKTSDTLLEQYPSGLKFSIHLRHGHQDSKKFVLKEDEMEMELEKYVQGGESYCVSTAIQDISGLGTWLSEEKCVLVPIPESPVTSLVIVFSVLGLLTLLSLSLLSLHLVLKRPAALPSVLKSLRIPESGWTPLVVGDVPLERVFFFSERMWFLTEGKDERGSCNSGVSLEQCLLEAPRGSARGGGGEGRGEANGSTAGLQKDTDSGCVSLGQCSLEEGKCGDSGTSLGQGGLLKEDSGVSVGLSPLLENTEVLECSIQVQDCGYRSQLPQTLLLSLPEPMGDSHSDCEGYRPGFRGCVCSGSGDCFLCRLEGHCGQQDTGDSGTGQLRLETEGVQSVREESEEDRQSHAAGGRKELLACVQNALQHFSNGYLKKTAPRLQPCEWDGAESLGFGVQGGTDSSEPGLTPAHSHSVLGSGRDTPLLFSASQLPFLGVQSEVLPGQRLSLTAVELTFN
SIO_010081: il10ra
subclass of: SO_0000673
so part of: il10ra
location: join(588655..588718,594204..594324,594669..594847,594946..595097,595815..595965,596134..596255,596877..597881)
location: region:588655-597881:1
so has part: feature:588655-588718:1:exon
so has part: feature:594204-594324:1:exon
so has part: feature:594669-594847:1:exon
so has part: feature:594946-595097:1:exon
so has part: feature:595815-595965:1:exon
so has part: feature:596134-596255:1:exon
so has part: feature:596877-597881:1:exon

XP_041090942.1
type: Protein
SIO_000068: ncbiprotein

position:588655:1
position: 588655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597881:1
position: 597881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588655-588718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594204-594324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594669-594847:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:594946-595097:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:595815-595965:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:596134-596255:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:596877-597881:1:exon

LOC121304060
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(601097..616520)
location: region:601097-616520:-1
so has part: feature:601097-616520:-1:exon
subclass of: SO_0000010

121304060
type: Gene
SIO_000068: ncbigene

position:601097:-1
position: 601097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616520:-1
position: 616520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601097-616520:-1:exon

LOC121304060
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304060
product: leucine-rich repeat extensin-like protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041235026.1
SIO_010081: LOC121304060
subclass of: SO_0000673
so part of: LOC121304060
location: complement(join(601097..603813,612399..612514,616206..616510))
location: region:601097-616510:-1
so has part: feature:616206-616510:-1:exon
so has part: feature:612399-612514:-1:exon
so has part: feature:601097-603813:-1:exon

position:616510:-1
position: 616510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616206-616510:-1:exon

position:616206:-1
position: 616206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:612399-612514:-1:exon

position:612399:-1
position: 612399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612514:-1
position: 612514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:601097-603813:-1:exon

position:603813:-1
position: 603813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121304060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat extensin-like protein 3
translation: MDQSEDFSSDSAPPEPHYSVDQSEDFSSDSAPPEPHYSMDQSEDFSSDSAPPEPHYSVDQSEDFSSDSAPPEPHYSMDQSEDFSSDSAPPEPHYSMDQSEDFSSDSAPPQPHYSMDQSEDFSSDSAPPKPHYSMDQSEDFSSDSAPPEPHYSMDQSEDFSSDSAPPKPHYSMDQSEDFSSDSAPPKPHYSMDQSEDFSSDSAPPEPHYSMDQSEDFSSDSAPPKPHYSVDQSEDFSSDSAPPEPHYSVDQSEDFSSDSAPPEPHYSMDQSEDFSSDSAPPEPHYSMDQSEDFSSDSAPPSLTTAWIRVKTSAVTVHPPSLTTAWSRVKTSAVTVHPPSLTTAWSRVKTSAVTVHAPSLTTAWSRVKTSAVTVHAPSLTSWLLCCILTLGAPRGCHSAVSFALPLSTC
SIO_010081: LOC121304060
subclass of: SO_0000673
so part of: LOC121304060
location: complement(601785..603008)
location: region:601785-603008:-1
so has part: feature:601785-603008:-1:exon

XP_041090960.1
type: Protein
SIO_000068: ncbiprotein

position:601785:-1
position: 601785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603008:-1
position: 603008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601785-603008:-1:exon

LOC121304060
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7913
gene: LOC121304060
product: leucine-rich repeat extensin-like protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005947909.1
SIO_010081: LOC121304060
so part of: LOC121304060
location: complement(join(611183..611989,612399..612514,616206..616520))
location: region:611183-616520:-1
so has part: feature:616206-616520:-1:exon
so has part: feature:612399-612514:-1:exon
so has part: feature:611183-611989:-1:exon

position:611183:-1
position: 611183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616206-616520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:612399-612514:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611183-611989:-1:exon

position:611989:-1
position: 611989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121304060
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7913
gene: LOC121304060
product: leucine-rich repeat extensin-like protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005947908.1
SIO_010081: LOC121304060
so part of: LOC121304060
location: complement(join(612887..612919,614450..614563,616206..616520))
location: region:612887-616520:-1
so has part: feature:616206-616520:-1:exon
so has part: feature:614450-614563:-1:exon
so has part: feature:612887-612919:-1:exon

position:612887:-1
position: 612887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616206-616520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:614450-614563:-1:exon

position:614450:-1
position: 614450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614563:-1
position: 614563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:612887-612919:-1:exon

position:612919:-1
position: 612919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tmprss4a
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: tmprss4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 618674..641181
location: region:618674-641181:1
so has part: feature:618674-641181:1:exon
subclass of: SO_0000010

121304044
type: Gene
SIO_000068: ncbigene

position:618674:1
position: 618674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641181:1
position: 641181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618674-641181:1:exon

tmprss4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: tmprss4a
product: transmembrane serine protease 4a, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_041235000.1
SIO_010081: tmprss4a
subclass of: SO_0000673
so part of: tmprss4a
location: join(618674..618782,618891..618938,633028..633076,633444..633557,634008..634160,634612..634741,635205..635321,636418..636461,636721..636880,637836..637996,638541..638636,640518..640660,640749..640898,641040..641181)
location: region:618674-641181:1
so has part: feature:618674-618782:1:exon
so has part: feature:618891-618938:1:exon
so has part: feature:633028-633076:1:exon
so has part: feature:633444-633557:1:exon
so has part: feature:634008-634160:1:exon
so has part: feature:634612-634741:1:exon
so has part: feature:635205-635321:1:exon
so has part: feature:636418-636461:1:exon
so has part: feature:636721-636880:1:exon
so has part: feature:637836-637996:1:exon
so has part: feature:638541-638636:1:exon
so has part: feature:640518-640660:1:exon
so has part: feature:640749-640898:1:exon
so has part: feature:641040-641181:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:618674-618782:1:exon

position:618782:1
position: 618782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:618891-618938:1:exon

position:618891:1
position: 618891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618938:1
position: 618938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:633028-633076:1:exon

position:633028:1
position: 633028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633076:1
position: 633076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:633444-633557:1:exon

position:633444:1
position: 633444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633557:1
position: 633557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:634008-634160:1:exon

position:634008:1
position: 634008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634160:1
position: 634160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:634612-634741:1:exon

position:634612:1
position: 634612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634741:1
position: 634741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:635205-635321:1:exon

position:635205:1
position: 635205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635321:1
position: 635321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:636418-636461:1:exon

position:636418:1
position: 636418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636461:1
position: 636461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:636721-636880:1:exon

position:636721:1
position: 636721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636880:1
position: 636880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:637836-637996:1:exon

position:637836:1
position: 637836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637996:1
position: 637996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:638541-638636:1:exon

position:638541:1
position: 638541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638636:1
position: 638636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:640518-640660:1:exon

position:640518:1
position: 640518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640660:1
position: 640660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:640749-640898:1:exon

position:640749:1
position: 640749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640898:1
position: 640898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:641040-641181:1:exon

position:641040:1
position: 641040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmprss4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: tmprss4a
product: transmembrane serine protease 4a, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_041235001.1
SIO_010081: tmprss4a
subclass of: SO_0000673
so part of: tmprss4a
location: join(618685..618782,633028..633076,633444..633557,634008..634160,634612..634741,635205..635321,636418..636461,636721..636880,637836..637996,638541..638636,640518..640660,640749..640898,641040..641181)
location: region:618685-641181:1
so has part: feature:618685-618782:1:exon
so has part: feature:633028-633076:1:exon
so has part: feature:633444-633557:1:exon
so has part: feature:634008-634160:1:exon
so has part: feature:634612-634741:1:exon
so has part: feature:635205-635321:1:exon
so has part: feature:636418-636461:1:exon
so has part: feature:636721-636880:1:exon
so has part: feature:637836-637996:1:exon
so has part: feature:638541-638636:1:exon
so has part: feature:640518-640660:1:exon
so has part: feature:640749-640898:1:exon
so has part: feature:641040-641181:1:exon

position:618685:1
position: 618685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618685-618782:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633028-633076:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:633444-633557:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:634008-634160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:634612-634741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635205-635321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636418-636461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636721-636880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637836-637996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:638541-638636:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:640518-640660:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:640749-640898:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:641040-641181:1:exon

tmprss4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: tmprss4a
product: transmembrane serine protease 4a, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041234999.1
SIO_010081: tmprss4a
subclass of: SO_0000673
so part of: tmprss4a
location: join(618789..618938,633028..633076,633444..633557,634008..634160,634612..634741,635205..635321,636418..636461,636721..636880,637836..637996,638541..638636,640518..640660,640749..640898,641040..641181)
location: region:618789-641181:1
so has part: feature:618789-618938:1:exon
so has part: feature:633028-633076:1:exon
so has part: feature:633444-633557:1:exon
so has part: feature:634008-634160:1:exon
so has part: feature:634612-634741:1:exon
so has part: feature:635205-635321:1:exon
so has part: feature:636418-636461:1:exon
so has part: feature:636721-636880:1:exon
so has part: feature:637836-637996:1:exon
so has part: feature:638541-638636:1:exon
so has part: feature:640518-640660:1:exon
so has part: feature:640749-640898:1:exon
so has part: feature:641040-641181:1:exon

position:618789:1
position: 618789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618789-618938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633028-633076:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:633444-633557:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:634008-634160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:634612-634741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635205-635321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636418-636461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636721-636880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637836-637996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:638541-638636:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:640518-640660:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:640749-640898:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:641040-641181:1:exon

tmprss4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: tmprss4a
product: transmembrane serine protease 4a, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_041234998.1
SIO_010081: tmprss4a
subclass of: SO_0000673
so part of: tmprss4a
location: join(627592..627945,633028..633076,633444..633557,634008..634160,634612..634741,635205..635321,636418..636461,636721..636880,637836..637996,638541..638636,640518..640660,640749..640898,641040..641181)
location: region:627592-641181:1
so has part: feature:627592-627945:1:exon
so has part: feature:633028-633076:1:exon
so has part: feature:633444-633557:1:exon
so has part: feature:634008-634160:1:exon
so has part: feature:634612-634741:1:exon
so has part: feature:635205-635321:1:exon
so has part: feature:636418-636461:1:exon
so has part: feature:636721-636880:1:exon
so has part: feature:637836-637996:1:exon
so has part: feature:638541-638636:1:exon
so has part: feature:640518-640660:1:exon
so has part: feature:640749-640898:1:exon
so has part: feature:641040-641181:1:exon

position:627592:1
position: 627592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627592-627945:1:exon

position:627945:1
position: 627945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:633028-633076:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:633444-633557:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:634008-634160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:634612-634741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635205-635321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636418-636461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636721-636880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637836-637996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:638541-638636:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:640518-640660:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:640749-640898:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:641040-641181:1:exon

tmprss4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: tmprss4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protease serine 4a isoform X1
translation: MSSLRSTKVIGRGLSPSGRMASGASPAGRTELKRLEAAESAKPLNPEVRAVPDQPSIVMTTRCIVITVVAVLVTLGILVGVSFLIKILLDYYYFFCIKSFKFIPLEKACDGIVDCKGSEDELNCVTKQTIKLTFPLRLVTDDGLLQVYSNASQSWRLVCAEGWQEALTNQACLELGYTSNPTSSQVLVRNLPAAMQGSYSWVNSPGNTRGIQSMLRDKDSCSSDSVVTLTCSGCGLKRSDRVVGGSDTTIQDWPWQVSLQYNKQHTCGGSLVTPRWIVTAAHCFPDNQKLLSRWGVVFGVTELTTQGAVGVSQVIIHGNYASNDNDIAMVMLSQPLTLSETVKPVCLPSYGLQLDANSPLWVTGWGNTQEKGKLAMVLQQAELAFLDREVCNRPISYAGLITPRMLCAGYLEGKVDSCQGDSGGPLVRLGDRWQLVGVVSWGSGCARPNRPGVYTNLGVFLDWIHGIMQQYS
SIO_010081: tmprss4a
subclass of: SO_0000673
so part of: tmprss4a
location: join(627856..627945,633028..633076,633444..633557,634008..634160,634612..634741,635205..635321,636418..636461,636721..636880,637836..637996,638541..638636,640518..640660,640749..640898,641040..641051)
location: region:627856-641051:1
so has part: feature:627856-627945:1:exon
so has part: feature:633028-633076:1:exon
so has part: feature:633444-633557:1:exon
so has part: feature:634008-634160:1:exon
so has part: feature:634612-634741:1:exon
so has part: feature:635205-635321:1:exon
so has part: feature:636418-636461:1:exon
so has part: feature:636721-636880:1:exon
so has part: feature:637836-637996:1:exon
so has part: feature:638541-638636:1:exon
so has part: feature:640518-640660:1:exon
so has part: feature:640749-640898:1:exon
so has part: feature:641040-641051:1:exon

XP_041090932.1
type: Protein
SIO_000068: ncbiprotein

position:627856:1
position: 627856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641051:1
position: 641051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627856-627945:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633028-633076:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:633444-633557:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:634008-634160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:634612-634741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635205-635321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636418-636461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636721-636880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637836-637996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:638541-638636:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:640518-640660:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:640749-640898:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:641040-641051:1:exon

tmprss4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: tmprss4a
product: transmembrane serine protease 4a, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041235002.1
SIO_010081: tmprss4a
subclass of: SO_0000673
so part of: tmprss4a
location: join(630722..630885,633028..633076,633444..633557,634008..634160,634612..634741,635205..635321,636418..636461,636721..636880,637836..637996,638541..638636,640518..640660,640749..640898,641040..641181)
location: region:630722-641181:1
so has part: feature:630722-630885:1:exon
so has part: feature:633028-633076:1:exon
so has part: feature:633444-633557:1:exon
so has part: feature:634008-634160:1:exon
so has part: feature:634612-634741:1:exon
so has part: feature:635205-635321:1:exon
so has part: feature:636418-636461:1:exon
so has part: feature:636721-636880:1:exon
so has part: feature:637836-637996:1:exon
so has part: feature:638541-638636:1:exon
so has part: feature:640518-640660:1:exon
so has part: feature:640749-640898:1:exon
so has part: feature:641040-641181:1:exon

position:630722:1
position: 630722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630722-630885:1:exon

position:630885:1
position: 630885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:633028-633076:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:633444-633557:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:634008-634160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:634612-634741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635205-635321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636418-636461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636721-636880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637836-637996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:638541-638636:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:640518-640660:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:640749-640898:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:641040-641181:1:exon

tmprss4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: tmprss4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protease serine 4a isoform X2
translation: MTTRCIVITVVAVLVTLGILVGVSFLIKILLDYYYFFCIKSFKFIPLEKACDGIVDCKGSEDELNCVTKQTIKLTFPLRLVTDDGLLQVYSNASQSWRLVCAEGWQEALTNQACLELGYTSNPTSSQVLVRNLPAAMQGSYSWVNSPGNTRGIQSMLRDKDSCSSDSVVTLTCSGCGLKRSDRVVGGSDTTIQDWPWQVSLQYNKQHTCGGSLVTPRWIVTAAHCFPDNQKLLSRWGVVFGVTELTTQGAVGVSQVIIHGNYASNDNDIAMVMLSQPLTLSETVKPVCLPSYGLQLDANSPLWVTGWGNTQEKGKLAMVLQQAELAFLDREVCNRPISYAGLITPRMLCAGYLEGKVDSCQGDSGGPLVRLGDRWQLVGVVSWGSGCARPNRPGVYTNLGVFLDWIHGIMQQYS
SIO_010081: tmprss4a
subclass of: SO_0000673
so part of: tmprss4a
location: join(633479..633557,634008..634160,634612..634741,635205..635321,636418..636461,636721..636880,637836..637996,638541..638636,640518..640660,640749..640898,641040..641051)
location: region:633479-641051:1
so has part: feature:633479-633557:1:exon
so has part: feature:634008-634160:1:exon
so has part: feature:634612-634741:1:exon
so has part: feature:635205-635321:1:exon
so has part: feature:636418-636461:1:exon
so has part: feature:636721-636880:1:exon
so has part: feature:637836-637996:1:exon
so has part: feature:638541-638636:1:exon
so has part: feature:640518-640660:1:exon
so has part: feature:640749-640898:1:exon
so has part: feature:641040-641051:1:exon

XP_041090933.1
type: Protein
SIO_000068: ncbiprotein

position:633479:1
position: 633479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633479-633557:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634008-634160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634612-634741:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635205-635321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:636418-636461:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:636721-636880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637836-637996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638541-638636:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:640518-640660:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640749-640898:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:641040-641051:1:exon

tmprss4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: tmprss4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protease serine 4a isoform X2
translation: MTTRCIVITVVAVLVTLGILVGVSFLIKILLDYYYFFCIKSFKFIPLEKACDGIVDCKGSEDELNCVTKQTIKLTFPLRLVTDDGLLQVYSNASQSWRLVCAEGWQEALTNQACLELGYTSNPTSSQVLVRNLPAAMQGSYSWVNSPGNTRGIQSMLRDKDSCSSDSVVTLTCSGCGLKRSDRVVGGSDTTIQDWPWQVSLQYNKQHTCGGSLVTPRWIVTAAHCFPDNQKLLSRWGVVFGVTELTTQGAVGVSQVIIHGNYASNDNDIAMVMLSQPLTLSETVKPVCLPSYGLQLDANSPLWVTGWGNTQEKGKLAMVLQQAELAFLDREVCNRPISYAGLITPRMLCAGYLEGKVDSCQGDSGGPLVRLGDRWQLVGVVSWGSGCARPNRPGVYTNLGVFLDWIHGIMQQYS
SIO_010081: tmprss4a
subclass of: SO_0000673
so part of: tmprss4a
location: join(633479..633557,634008..634160,634612..634741,635205..635321,636418..636461,636721..636880,637836..637996,638541..638636,640518..640660,640749..640898,641040..641051)
location: region:633479-641051:1
so has part: feature:633479-633557:1:exon
so has part: feature:634008-634160:1:exon
so has part: feature:634612-634741:1:exon
so has part: feature:635205-635321:1:exon
so has part: feature:636418-636461:1:exon
so has part: feature:636721-636880:1:exon
so has part: feature:637836-637996:1:exon
so has part: feature:638541-638636:1:exon
so has part: feature:640518-640660:1:exon
so has part: feature:640749-640898:1:exon
so has part: feature:641040-641051:1:exon

XP_041090934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:633479-633557:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634008-634160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634612-634741:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635205-635321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:636418-636461:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:636721-636880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637836-637996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638541-638636:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:640518-640660:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640749-640898:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:641040-641051:1:exon

tmprss4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: tmprss4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protease serine 4a isoform X2
translation: MTTRCIVITVVAVLVTLGILVGVSFLIKILLDYYYFFCIKSFKFIPLEKACDGIVDCKGSEDELNCVTKQTIKLTFPLRLVTDDGLLQVYSNASQSWRLVCAEGWQEALTNQACLELGYTSNPTSSQVLVRNLPAAMQGSYSWVNSPGNTRGIQSMLRDKDSCSSDSVVTLTCSGCGLKRSDRVVGGSDTTIQDWPWQVSLQYNKQHTCGGSLVTPRWIVTAAHCFPDNQKLLSRWGVVFGVTELTTQGAVGVSQVIIHGNYASNDNDIAMVMLSQPLTLSETVKPVCLPSYGLQLDANSPLWVTGWGNTQEKGKLAMVLQQAELAFLDREVCNRPISYAGLITPRMLCAGYLEGKVDSCQGDSGGPLVRLGDRWQLVGVVSWGSGCARPNRPGVYTNLGVFLDWIHGIMQQYS
SIO_010081: tmprss4a
subclass of: SO_0000673
so part of: tmprss4a
location: join(633479..633557,634008..634160,634612..634741,635205..635321,636418..636461,636721..636880,637836..637996,638541..638636,640518..640660,640749..640898,641040..641051)
location: region:633479-641051:1
so has part: feature:633479-633557:1:exon
so has part: feature:634008-634160:1:exon
so has part: feature:634612-634741:1:exon
so has part: feature:635205-635321:1:exon
so has part: feature:636418-636461:1:exon
so has part: feature:636721-636880:1:exon
so has part: feature:637836-637996:1:exon
so has part: feature:638541-638636:1:exon
so has part: feature:640518-640660:1:exon
so has part: feature:640749-640898:1:exon
so has part: feature:641040-641051:1:exon

XP_041090935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:633479-633557:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634008-634160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634612-634741:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635205-635321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:636418-636461:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:636721-636880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637836-637996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638541-638636:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:640518-640660:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640749-640898:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:641040-641051:1:exon

tmprss4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: tmprss4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protease serine 4a isoform X2
translation: MTTRCIVITVVAVLVTLGILVGVSFLIKILLDYYYFFCIKSFKFIPLEKACDGIVDCKGSEDELNCVTKQTIKLTFPLRLVTDDGLLQVYSNASQSWRLVCAEGWQEALTNQACLELGYTSNPTSSQVLVRNLPAAMQGSYSWVNSPGNTRGIQSMLRDKDSCSSDSVVTLTCSGCGLKRSDRVVGGSDTTIQDWPWQVSLQYNKQHTCGGSLVTPRWIVTAAHCFPDNQKLLSRWGVVFGVTELTTQGAVGVSQVIIHGNYASNDNDIAMVMLSQPLTLSETVKPVCLPSYGLQLDANSPLWVTGWGNTQEKGKLAMVLQQAELAFLDREVCNRPISYAGLITPRMLCAGYLEGKVDSCQGDSGGPLVRLGDRWQLVGVVSWGSGCARPNRPGVYTNLGVFLDWIHGIMQQYS
SIO_010081: tmprss4a
subclass of: SO_0000673
so part of: tmprss4a
location: join(633479..633557,634008..634160,634612..634741,635205..635321,636418..636461,636721..636880,637836..637996,638541..638636,640518..640660,640749..640898,641040..641051)
location: region:633479-641051:1
so has part: feature:633479-633557:1:exon
so has part: feature:634008-634160:1:exon
so has part: feature:634612-634741:1:exon
so has part: feature:635205-635321:1:exon
so has part: feature:636418-636461:1:exon
so has part: feature:636721-636880:1:exon
so has part: feature:637836-637996:1:exon
so has part: feature:638541-638636:1:exon
so has part: feature:640518-640660:1:exon
so has part: feature:640749-640898:1:exon
so has part: feature:641040-641051:1:exon

XP_041090936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:633479-633557:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634008-634160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634612-634741:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635205-635321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:636418-636461:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:636721-636880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637836-637996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638541-638636:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:640518-640660:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640749-640898:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:641040-641051:1:exon

LOC121303931
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303931
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(649574..660510)
location: region:649574-660510:-1
so has part: feature:649574-660510:-1:exon
subclass of: SO_0000010

121303931
type: Gene
SIO_000068: ncbigene

position:649574:-1
position: 649574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660510:-1
position: 660510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:649574-660510:-1:exon

LOC121303931
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303931
product: sodium channel subunit beta-4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_041234804.1
SIO_010081: LOC121303931
subclass of: SO_0000673
so part of: LOC121303931
location: complement(join(649574..649712,650887..651016,651913..652132,652475..652647,659665..659781,660044..660115,660239..660510))
location: region:649574-660510:-1
so has part: feature:660239-660510:-1:exon
so has part: feature:660044-660115:-1:exon
so has part: feature:659665-659781:-1:exon
so has part: feature:652475-652647:-1:exon
so has part: feature:651913-652132:-1:exon
so has part: feature:650887-651016:-1:exon
so has part: feature:649574-649712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:660239-660510:-1:exon

position:660239:-1
position: 660239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:660044-660115:-1:exon

position:660044:-1
position: 660044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660115:-1
position: 660115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:659665-659781:-1:exon

position:659665:-1
position: 659665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659781:-1
position: 659781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:652475-652647:-1:exon

position:652475:-1
position: 652475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652647:-1
position: 652647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:651913-652132:-1:exon

position:651913:-1
position: 651913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652132:-1
position: 652132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:650887-651016:-1:exon

position:650887:-1
position: 650887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651016:-1
position: 651016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:649574-649712:-1:exon

position:649712:-1
position: 649712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121303931
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303931
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel subunit beta-4-like
translation: MKPDRTGSSLWSWLRPEERIFKGLLLTLLLGGCWSPGAHSLEVSVGKVTSVEALNGSDVLLPCTFSSCIGYEDLLFRWSYKRNSTLELMFEATIKGPEYEPRILFSDYRVQFAGTSKSNNISIILFNVDFDDSGQYICYAKNPKEKNRVHRATYTLLVVSEMKVVDKTLTTIIVSVVGGLIGFLVVFLLGKKLILFAIAKSRERKECLVSSSGIDNTENGPTGSKGNTKQTSKA
SIO_010081: LOC121303931
subclass of: SO_0000673
so part of: LOC121303931
location: complement(join(649622..649712,650887..651016,651913..652132,652475..652647,659665..659755))
location: region:649622-659755:-1
so has part: feature:659665-659755:-1:exon
so has part: feature:652475-652647:-1:exon
so has part: feature:651913-652132:-1:exon
so has part: feature:650887-651016:-1:exon
so has part: feature:649622-649712:-1:exon

XP_041090738.1
type: Protein
SIO_000068: ncbiprotein

position:649622:-1
position: 649622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659755:-1
position: 659755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659665-659755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:652475-652647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:651913-652132:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650887-651016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649622-649712:-1:exon

LOC121304051
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304051
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 671010..678738
location: region:671010-678738:1
so has part: feature:671010-678738:1:exon
subclass of: SO_0000011

121304051
type: Gene
SIO_000068: ncbigene

position:671010:1
position: 671010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678738:1
position: 678738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:671010-678738:1:exon

LOC121304051
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: lncRNA
gene: LOC121304051
product: uncharacterized LOC121304051
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005947907.1
SIO_010081: LOC121304051
subclass of: SO_0000673
so part of: LOC121304051
location: join(671010..671154,671615..671688,678652..678738)
location: region:671010-678738:1
so has part: feature:671010-671154:1:exon
so has part: feature:671615-671688:1:exon
so has part: feature:678652-678738:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:671010-671154:1:exon

position:671154:1
position: 671154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:671615-671688:1:exon

position:671615:1
position: 671615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671688:1
position: 671688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:678652-678738:1:exon

position:678652:1
position: 678652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

scn2b
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: scn2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(678523..690259)
location: region:678523-690259:-1
so has part: feature:678523-690259:-1:exon
subclass of: SO_0000010

121304050
type: Gene
SIO_000068: ncbigene

position:678523:-1
position: 678523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690259:-1
position: 690259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678523-690259:-1:exon

scn2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: scn2b
product: sodium channel, voltage-gated, type II, beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_041235010.1
SIO_010081: scn2b
subclass of: SO_0000673
so part of: scn2b
location: complement(join(678523..678779,678937..679147,680150..680316,689875..690259))
location: region:678523-690259:-1
so has part: feature:689875-690259:-1:exon
so has part: feature:680150-680316:-1:exon
so has part: feature:678937-679147:-1:exon
so has part: feature:678523-678779:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:689875-690259:-1:exon

position:689875:-1
position: 689875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:680150-680316:-1:exon

position:680150:-1
position: 680150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680316:-1
position: 680316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:678937-679147:-1:exon

position:678937:-1
position: 678937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679147:-1
position: 679147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:678523-678779:-1:exon

position:678779:-1
position: 678779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

scn2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: scn2b
product: sodium channel, voltage-gated, type II, beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041235009.1
SIO_010081: scn2b
subclass of: SO_0000673
so part of: scn2b
location: complement(join(678523..678779,678937..679147,680150..680316,685518..686047))
location: region:678523-686047:-1
so has part: feature:685518-686047:-1:exon
so has part: feature:680150-680316:-1:exon
so has part: feature:678937-679147:-1:exon
so has part: feature:678523-678779:-1:exon

position:686047:-1
position: 686047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685518-686047:-1:exon

position:685518:-1
position: 685518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:680150-680316:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:678937-679147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:678523-678779:-1:exon

scn2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: scn2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel subunit beta-2 isoform X2
translation: MFLLNQIRTKPGMKLISTCFWGLSLIFIVAPPASSMEVMVTHNINALNGTTVRLACNFISCYRVDKSKFSMNWTYQECFNCTEELFLLYKHKDINLWHPRFGGRVVFTGNPDKNDVSVTISEVQLSDEGVYHCYVKNPPDRQLGHGVINFNVITEVPPERDSTVAVIIGASVGGLLALLILAMVVVKCLRRRKKQELELEEEGKNEGGEGGAEESSK
SIO_010081: scn2b
subclass of: SO_0000673
so part of: scn2b
location: complement(join(678592..678779,678937..679147,680150..680316,689875..689962))
location: region:678592-689962:-1
so has part: feature:689875-689962:-1:exon
so has part: feature:680150-680316:-1:exon
so has part: feature:678937-679147:-1:exon
so has part: feature:678592-678779:-1:exon

XP_041090944.1
type: Protein
SIO_000068: ncbiprotein

position:678592:-1
position: 678592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689962:-1
position: 689962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689875-689962:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680150-680316:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:678937-679147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:678592-678779:-1:exon

scn2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: scn2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel subunit beta-2 isoform X1
translation: MTTQPFLSGNAGFFIAALFAGQAGVAESVPSPPASSMEVMVTHNINALNGTTVRLACNFISCYRVDKSKFSMNWTYQECFNCTEELFLLYKHKDINLWHPRFGGRVVFTGNPDKNDVSVTISEVQLSDEGVYHCYVKNPPDRQLGHGVINFNVITEVPPERDSTVAVIIGASVGGLLALLILAMVVVKCLRRRKKQELELEEEGKNEGGEGGAEESSK
SIO_010081: scn2b
subclass of: SO_0000673
so part of: scn2b
location: complement(join(678592..678779,678937..679147,680150..680316,685518..685608))
location: region:678592-685608:-1
so has part: feature:685518-685608:-1:exon
so has part: feature:680150-680316:-1:exon
so has part: feature:678937-679147:-1:exon
so has part: feature:678592-678779:-1:exon

XP_041090943.1
type: Protein
SIO_000068: ncbiprotein

position:685608:-1
position: 685608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685518-685608:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680150-680316:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:678937-679147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:678592-678779:-1:exon

LOC121304006
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304006
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(693080..705367)
location: region:693080-705367:-1
so has part: feature:693080-705367:-1:exon
subclass of: SO_0000010

121304006
type: Gene
SIO_000068: ncbigene

position:693080:-1
position: 693080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705367:-1
position: 705367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693080-705367:-1:exon

LOC121304006
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304006
product: uncharacterized LOC121304006
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041234930.1
SIO_010081: LOC121304006
subclass of: SO_0000673
so part of: LOC121304006
location: complement(join(693080..693379,694851..694946,695567..695630,698397..698559,700113..700314,700479..700627,700967..701011,704476..705367))
location: region:693080-705367:-1
so has part: feature:704476-705367:-1:exon
so has part: feature:700967-701011:-1:exon
so has part: feature:700479-700627:-1:exon
so has part: feature:700113-700314:-1:exon
so has part: feature:698397-698559:-1:exon
so has part: feature:695567-695630:-1:exon
so has part: feature:694851-694946:-1:exon
so has part: feature:693080-693379:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:704476-705367:-1:exon

position:704476:-1
position: 704476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:700967-701011:-1:exon

position:700967:-1
position: 700967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701011:-1
position: 701011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:700479-700627:-1:exon

position:700479:-1
position: 700479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700627:-1
position: 700627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:700113-700314:-1:exon

position:700113:-1
position: 700113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700314:-1
position: 700314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:698397-698559:-1:exon

position:698397:-1
position: 698397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698559:-1
position: 698559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:695567-695630:-1:exon

position:695567:-1
position: 695567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695630:-1
position: 695630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:694851-694946:-1:exon

position:694851:-1
position: 694851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694946:-1
position: 694946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:693080-693379:-1:exon

position:693379:-1
position: 693379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121304006
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304006
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121304006
translation: MLWIFHLAILTVCCRAQLSIHTQPEVDVTEGSTALLPCTFTLGPEERLQSTSVDWENQNNTVIFYHYHHNLSVATHDRVTFVGNISQNNASILLRDVRRTDEGDYLCLVRVGMNMVKNRSELRVRALRARGSLLEVPLNPSPPPLAPPPLWPAVAGGLAAGLVLVMVVLVLILRRQQQDTTLREDQRSSAVVACQDPESPRRDKDTDCYVTLPRNLLPKDPPPLSCSTSEGIYVTMYVNGSRSERGRKGIPEEWCAVETHP
SIO_010081: LOC121304006
subclass of: SO_0000673
so part of: LOC121304006
location: complement(join(693302..693379,694851..694946,695567..695630,698397..698559,700113..700314,700479..700627,700967..701000))
location: region:693302-701000:-1
so has part: feature:700967-701000:-1:exon
so has part: feature:700479-700627:-1:exon
so has part: feature:700113-700314:-1:exon
so has part: feature:698397-698559:-1:exon
so has part: feature:695567-695630:-1:exon
so has part: feature:694851-694946:-1:exon
so has part: feature:693302-693379:-1:exon

XP_041090864.1
type: Protein
SIO_000068: ncbiprotein

position:693302:-1
position: 693302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701000:-1
position: 701000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700967-701000:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:700479-700627:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:700113-700314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:698397-698559:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:695567-695630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:694851-694946:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:693302-693379:-1:exon

mpzl3
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: mpzl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(705465..715860)
location: region:705465-715860:-1
so has part: feature:705465-715860:-1:exon
subclass of: SO_0000010

121304007
type: Gene
SIO_000068: ncbigene

position:705465:-1
position: 705465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715860:-1
position: 715860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705465-715860:-1:exon

mpzl3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: mpzl3
product: myelin protein zero-like 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_041234931.1
SIO_010081: mpzl3
subclass of: SO_0000673
so part of: mpzl3
location: complement(join(705465..706225,706592..706661,707152..707317,707518..707728,712050..712216,715608..715860))
location: region:705465-715860:-1
so has part: feature:715608-715860:-1:exon
so has part: feature:712050-712216:-1:exon
so has part: feature:707518-707728:-1:exon
so has part: feature:707152-707317:-1:exon
so has part: feature:706592-706661:-1:exon
so has part: feature:705465-706225:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:715608-715860:-1:exon

position:715608:-1
position: 715608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:712050-712216:-1:exon

position:712050:-1
position: 712050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712216:-1
position: 712216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:707518-707728:-1:exon

position:707518:-1
position: 707518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707728:-1
position: 707728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:707152-707317:-1:exon

position:707152:-1
position: 707152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707317:-1
position: 707317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:706592-706661:-1:exon

position:706592:-1
position: 706592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706661:-1
position: 706661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:705465-706225:-1:exon

position:706225:-1
position: 706225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mpzl3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: mpzl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin protein zero-like protein 3
translation: MGRCKPRVISLCFLLVCGCWQAAAVEMQVASEVNGVVGDDATLRCTFTSSSPVTARLSVDWTYQPLDGQASHSFFYYQSKAFLQTEGLFKGRVSWQGDVNRGDASIQLRNLTLNDNGTFTCTVRNPPDVHGNLAKTVLTVTPRGNPIRITEFILLSGLVLLPSILIVSVLLVRMGCSNGILGRRKTHVCKRSPIEASDGEEDVHKKPSLKRNIIMCCYMCFQDPDYEEALYSMQRRQSEINAESQC
SIO_010081: mpzl3
subclass of: SO_0000673
so part of: mpzl3
location: complement(join(706151..706225,706592..706661,707152..707317,707518..707728,712050..712216,715608..715659))
location: region:706151-715659:-1
so has part: feature:715608-715659:-1:exon
so has part: feature:712050-712216:-1:exon
so has part: feature:707518-707728:-1:exon
so has part: feature:707152-707317:-1:exon
so has part: feature:706592-706661:-1:exon
so has part: feature:706151-706225:-1:exon

XP_041090865.1
type: Protein
SIO_000068: ncbiprotein

position:706151:-1
position: 706151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715659:-1
position: 715659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715608-715659:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:712050-712216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:707518-707728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:707152-707317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706592-706661:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:706151-706225:-1:exon

mpzl2b
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: mpzl2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(723276..731192)
location: region:723276-731192:-1
so has part: feature:723276-731192:-1:exon
subclass of: SO_0000010

121304055
type: Gene
SIO_000068: ncbigene

position:723276:-1
position: 723276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731192:-1
position: 731192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723276-731192:-1:exon

mpzl2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: mpzl2b
product: myelin protein zero-like 2b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041235017.1
SIO_010081: mpzl2b
subclass of: SO_0000673
so part of: mpzl2b
location: complement(join(723276..724676,725259..725406,725760..725973,726304..726461,730790..731192))
location: region:723276-731192:-1
so has part: feature:730790-731192:-1:exon
so has part: feature:726304-726461:-1:exon
so has part: feature:725760-725973:-1:exon
so has part: feature:725259-725406:-1:exon
so has part: feature:723276-724676:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:730790-731192:-1:exon

position:730790:-1
position: 730790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:726304-726461:-1:exon

position:726304:-1
position: 726304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726461:-1
position: 726461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:725760-725973:-1:exon

position:725760:-1
position: 725760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725973:-1
position: 725973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:725259-725406:-1:exon

position:725259:-1
position: 725259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725406:-1
position: 725406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:723276-724676:-1:exon

position:724676:-1
position: 724676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mpzl2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: mpzl2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin protein zero-like protein 2b
translation: MFGIRLKLCTFLCGIAVSDVCAVEVYTPVELQAVNGTDARLKCTFTSSAPISVQASVSWNFRPLSGGIEESVFYYQEQPYTPTSGKFKGRAVWSGDIRRGDASITIRDLKFSDNGTYSCHVKNPPEDVHGQAGELQLRVVSTVSHSEMKILLGAMGGAIVLAIVLIVTVASIRACRQHRRQRTELEKNPQYNHSEETECLSLEHRHEQKPQEEVEELKSSQEEICQEEVQELKSSQEEICQEEVEELKSSQEEICQEKVQELKSSLEKICHEKVQVHLKSDS
SIO_010081: mpzl2b
subclass of: SO_0000673
so part of: mpzl2b
location: complement(join(724403..724676,725259..725406,725760..725973,726304..726461,730790..730844))
location: region:724403-730844:-1
so has part: feature:730790-730844:-1:exon
so has part: feature:726304-726461:-1:exon
so has part: feature:725760-725973:-1:exon
so has part: feature:725259-725406:-1:exon
so has part: feature:724403-724676:-1:exon

XP_041090951.1
type: Protein
SIO_000068: ncbiprotein

position:724403:-1
position: 724403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730844:-1
position: 730844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730790-730844:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:726304-726461:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725760-725973:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:725259-725406:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:724403-724676:-1:exon

LOC121303934
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 733967..759207
location: region:733967-759207:1
so has part: feature:733967-759207:1:exon
subclass of: SO_0000010

121303934
type: Gene
SIO_000068: ncbigene

position:733967:1
position: 733967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759207:1
position: 759207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:733967-759207:1:exon

LOC121303934
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303934
product: T-cell surface glycoprotein CD3 epsilon chain-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_041234835.1
SIO_010081: LOC121303934
subclass of: SO_0000673
so part of: LOC121303934
location: join(733967..734398,738489..738512,756807..756944,757307..757362,758554..759207)
location: region:733967-759207:1
so has part: feature:733967-734398:1:exon
so has part: feature:738489-738512:1:exon
so has part: feature:756807-756944:1:exon
so has part: feature:757307-757362:1:exon
so has part: feature:758554-759207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:733967-734398:1:exon

position:734398:1
position: 734398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:738489-738512:1:exon

position:738489:1
position: 738489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738512:1
position: 738512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:756807-756944:1:exon

position:756807:1
position: 756807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756944:1
position: 756944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:757307-757362:1:exon

position:757307:1
position: 757307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757362:1
position: 757362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:758554-759207:1:exon

position:758554:1
position: 758554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121303934
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303934
product: T-cell surface glycoprotein CD3 epsilon chain-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_041234834.1
SIO_010081: LOC121303934
subclass of: SO_0000673
so part of: LOC121303934
location: join(733968..734398,736133..736156,738489..738512,756807..756944,757307..757362,758554..759207)
location: region:733968-759207:1
so has part: feature:733968-734398:1:exon
so has part: feature:736133-736156:1:exon
so has part: feature:738489-738512:1:exon
so has part: feature:756807-756944:1:exon
so has part: feature:757307-757362:1:exon
so has part: feature:758554-759207:1:exon

position:733968:1
position: 733968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:733968-734398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736133-736156:1:exon

position:736133:1
position: 736133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736156:1
position: 736156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:738489-738512:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:756807-756944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:757307-757362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:758554-759207:1:exon

LOC121303934
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303934
product: T-cell surface glycoprotein CD3 epsilon chain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_041234831.1
SIO_010081: LOC121303934
subclass of: SO_0000673
so part of: LOC121303934
location: join(733974..734398,736133..736156,739593..739796,756807..756944,757307..757362,758554..759207)
location: region:733974-759207:1
so has part: feature:733974-734398:1:exon
so has part: feature:736133-736156:1:exon
so has part: feature:739593-739796:1:exon
so has part: feature:756807-756944:1:exon
so has part: feature:757307-757362:1:exon
so has part: feature:758554-759207:1:exon

position:733974:1
position: 733974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:733974-734398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736133-736156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739593-739796:1:exon

position:739593:1
position: 739593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739796:1
position: 739796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:756807-756944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:757307-757362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:758554-759207:1:exon

LOC121303934
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303934
product: T-cell surface glycoprotein CD3 epsilon chain-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041234832.1
SIO_010081: LOC121303934
subclass of: SO_0000673
so part of: LOC121303934
location: join(733974..734398,738489..738512,739593..739796,756807..756944,757307..757362,758554..759207)
location: region:733974-759207:1
so has part: feature:733974-734398:1:exon
so has part: feature:738489-738512:1:exon
so has part: feature:739593-739796:1:exon
so has part: feature:756807-756944:1:exon
so has part: feature:757307-757362:1:exon
so has part: feature:758554-759207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:733974-734398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:738489-738512:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739593-739796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:756807-756944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:757307-757362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:758554-759207:1:exon

LOC121303934
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303934
product: T-cell surface glycoprotein CD3 epsilon chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_041234830.1
SIO_010081: LOC121303934
subclass of: SO_0000673
so part of: LOC121303934
location: join(733977..734398,736133..736156,738489..738512,739593..739796,756807..756944,757310..757362,758554..759207)
location: region:733977-759207:1
so has part: feature:733977-734398:1:exon
so has part: feature:736133-736156:1:exon
so has part: feature:738489-738512:1:exon
so has part: feature:739593-739796:1:exon
so has part: feature:756807-756944:1:exon
so has part: feature:757310-757362:1:exon
so has part: feature:758554-759207:1:exon

position:733977:1
position: 733977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:733977-734398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736133-736156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:738489-738512:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:739593-739796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:756807-756944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:757310-757362:1:exon

position:757310:1
position: 757310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:758554-759207:1:exon

LOC121303934
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303934
product: T-cell surface glycoprotein CD3 epsilon chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_041234828.1
SIO_010081: LOC121303934
subclass of: SO_0000673
so part of: LOC121303934
location: join(733978..734398,736133..736156,738489..738512,739593..739796,756807..756944,757307..757362,758554..759207)
location: region:733978-759207:1
so has part: feature:733978-734398:1:exon
so has part: feature:736133-736156:1:exon
so has part: feature:738489-738512:1:exon
so has part: feature:739593-739796:1:exon
so has part: feature:756807-756944:1:exon
so has part: feature:757307-757362:1:exon
so has part: feature:758554-759207:1:exon

position:733978:1
position: 733978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:733978-734398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736133-736156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:738489-738512:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:739593-739796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:756807-756944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:757307-757362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:758554-759207:1:exon

LOC121303934
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell surface glycoprotein CD3 epsilon chain-like isoform X1
translation: MKLRMKKATSLLLALFIAVCSGQEDGTEQGQDEGTEQGSVYVSGTEVTLTCPFTYTEEGDITWKDKKGGIEEENRLTFKTYDKTKDGLYHCIFKGKQYSFYVKAKVCEGCVEVEVVQVIGIIFADLLVTVGVAILVYYWAQNRKGATAMAPAARPGRQNRAPPVPSPDYEPIRTGNREVYSGLNKRT
SIO_010081: LOC121303934
subclass of: SO_0000673
so part of: LOC121303934
location: join(734335..734398,736133..736156,738489..738512,739593..739796,756807..756944,757307..757362,758554..758607)
location: region:734335-758607:1
so has part: feature:734335-734398:1:exon
so has part: feature:736133-736156:1:exon
so has part: feature:738489-738512:1:exon
so has part: feature:739593-739796:1:exon
so has part: feature:756807-756944:1:exon
so has part: feature:757307-757362:1:exon
so has part: feature:758554-758607:1:exon

XP_041090762.1
type: Protein
SIO_000068: ncbiprotein

position:734335:1
position: 734335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758607:1
position: 758607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734335-734398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736133-736156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:738489-738512:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:739593-739796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:756807-756944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:757307-757362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:758554-758607:1:exon

LOC121303934
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell surface glycoprotein CD3 epsilon chain-like isoform X2
translation: MKLRMKKATSLLLALFIAVCSGQEDGTEQGQDEGTEQGSVYVSGTEVTLTCPFTYTEEGDITWKDKKGGIEEENRLTFKTYDKTKDGLYHCIFKGKQYSFYVKAKVCEGCVEVEVVQVIGIIFADLLVTVGVAILVYYWAQNRKGATAMAPARPGRQNRAPPVPSPDYEPIRTGNREVYSGLNKRT
SIO_010081: LOC121303934
subclass of: SO_0000673
so part of: LOC121303934
location: join(734335..734398,736133..736156,738489..738512,739593..739796,756807..756944,757310..757362,758554..758607)
location: region:734335-758607:1
so has part: feature:734335-734398:1:exon
so has part: feature:736133-736156:1:exon
so has part: feature:738489-738512:1:exon
so has part: feature:739593-739796:1:exon
so has part: feature:756807-756944:1:exon
so has part: feature:757310-757362:1:exon
so has part: feature:758554-758607:1:exon

XP_041090764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:734335-734398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736133-736156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:738489-738512:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:739593-739796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:756807-756944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:757310-757362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:758554-758607:1:exon

LOC121303934
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell surface glycoprotein CD3 epsilon chain-like isoform X6
translation: MKLRMKKATSLLLALFIAVCSGQEDGTEQGQDEGTEQVCEGCVEVEVVQVIGIIFADLLVTVGVAILVYYWAQNRKGATAMAPAARPGRQNRAPPVPSPDYEPIRTGNREVYSGLNKRT
SIO_010081: LOC121303934
subclass of: SO_0000673
so part of: LOC121303934
location: join(734335..734398,736133..736156,738489..738512,756807..756944,757307..757362,758554..758607)
location: region:734335-758607:1
so has part: feature:734335-734398:1:exon
so has part: feature:736133-736156:1:exon
so has part: feature:738489-738512:1:exon
so has part: feature:756807-756944:1:exon
so has part: feature:757307-757362:1:exon
so has part: feature:758554-758607:1:exon

XP_041090768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:734335-734398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736133-736156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:738489-738512:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:756807-756944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:757307-757362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:758554-758607:1:exon

LOC121303934
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell surface glycoprotein CD3 epsilon chain-like isoform X3
translation: MKLRMKKATSLLLALFIAVCSGQEDGTEQGSVYVSGTEVTLTCPFTYTEEGDITWKDKKGGIEEENRLTFKTYDKTKDGLYHCIFKGKQYSFYVKAKVCEGCVEVEVVQVIGIIFADLLVTVGVAILVYYWAQNRKGATAMAPAARPGRQNRAPPVPSPDYEPIRTGNREVYSGLNKRT
SIO_010081: LOC121303934
subclass of: SO_0000673
so part of: LOC121303934
location: join(734335..734398,736133..736156,739593..739796,756807..756944,757307..757362,758554..758607)
location: region:734335-758607:1
so has part: feature:734335-734398:1:exon
so has part: feature:736133-736156:1:exon
so has part: feature:739593-739796:1:exon
so has part: feature:756807-756944:1:exon
so has part: feature:757307-757362:1:exon
so has part: feature:758554-758607:1:exon

XP_041090765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:734335-734398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736133-736156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739593-739796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:756807-756944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:757307-757362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:758554-758607:1:exon

LOC121303934
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell surface glycoprotein CD3 epsilon chain-like isoform X4
translation: MKLRMKKATSLLLALFIAVCSGQDEGTEQGSVYVSGTEVTLTCPFTYTEEGDITWKDKKGGIEEENRLTFKTYDKTKDGLYHCIFKGKQYSFYVKAKVCEGCVEVEVVQVIGIIFADLLVTVGVAILVYYWAQNRKGATAMAPAARPGRQNRAPPVPSPDYEPIRTGNREVYSGLNKRT
SIO_010081: LOC121303934
subclass of: SO_0000673
so part of: LOC121303934
location: join(734335..734398,738489..738512,739593..739796,756807..756944,757307..757362,758554..758607)
location: region:734335-758607:1
so has part: feature:734335-734398:1:exon
so has part: feature:738489-738512:1:exon
so has part: feature:739593-739796:1:exon
so has part: feature:756807-756944:1:exon
so has part: feature:757307-757362:1:exon
so has part: feature:758554-758607:1:exon

XP_041090766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:734335-734398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:738489-738512:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739593-739796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:756807-756944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:757307-757362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:758554-758607:1:exon

LOC121303934
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell surface glycoprotein CD3 epsilon chain-like isoform X7
translation: MKLRMKKATSLLLALFIAVCSGQDEGTEQVCEGCVEVEVVQVIGIIFADLLVTVGVAILVYYWAQNRKGATAMAPAARPGRQNRAPPVPSPDYEPIRTGNREVYSGLNKRT
SIO_010081: LOC121303934
subclass of: SO_0000673
so part of: LOC121303934
location: join(734335..734398,738489..738512,756807..756944,757307..757362,758554..758607)
location: region:734335-758607:1
so has part: feature:734335-734398:1:exon
so has part: feature:738489-738512:1:exon
so has part: feature:756807-756944:1:exon
so has part: feature:757307-757362:1:exon
so has part: feature:758554-758607:1:exon

XP_041090769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:734335-734398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:738489-738512:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756807-756944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:757307-757362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:758554-758607:1:exon

LOC121303934
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303934
product: T-cell surface glycoprotein CD3 epsilon chain-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041234833.1
SIO_010081: LOC121303934
subclass of: SO_0000673
so part of: LOC121303934
location: join(736491..737195,738489..738512,739593..739796,756807..756944,757307..757362,758554..759207)
location: region:736491-759207:1
so has part: feature:736491-737195:1:exon
so has part: feature:738489-738512:1:exon
so has part: feature:739593-739796:1:exon
so has part: feature:756807-756944:1:exon
so has part: feature:757307-757362:1:exon
so has part: feature:758554-759207:1:exon

position:736491:1
position: 736491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736491-737195:1:exon

position:737195:1
position: 737195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:738489-738512:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739593-739796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:756807-756944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:757307-757362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:758554-759207:1:exon

LOC121303934
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell surface glycoprotein CD3 epsilon chain-like isoform X5
translation: MKLRLKKATSLLLALFIAVCSGQDEGTEQGSVYVSGTEVTLTCPFTYTEEGDITWKDKKGGIEEENRLTFKTYDKTKDGLYHCIFKGKQYSFYVKAKVCEGCVEVEVVQVIGIIFADLLVTVGVAILVYYWAQNRKGATAMAPAARPGRQNRAPPVPSPDYEPIRTGNREVYSGLNKRT
SIO_010081: LOC121303934
subclass of: SO_0000673
so part of: LOC121303934
location: join(737132..737195,738489..738512,739593..739796,756807..756944,757307..757362,758554..758607)
location: region:737132-758607:1
so has part: feature:737132-737195:1:exon
so has part: feature:738489-738512:1:exon
so has part: feature:739593-739796:1:exon
so has part: feature:756807-756944:1:exon
so has part: feature:757307-757362:1:exon
so has part: feature:758554-758607:1:exon

XP_041090767.1
type: Protein
SIO_000068: ncbiprotein

position:737132:1
position: 737132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:737132-737195:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:738489-738512:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739593-739796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:756807-756944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:757307-757362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:758554-758607:1:exon

LOC121303924
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303924
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(803355..804250)
location: region:803355-804250:-1
so has part: feature:803355-804250:-1:exon
subclass of: SO_0000011

121303924
type: Gene
SIO_000068: ncbigene

position:803355:-1
position: 803355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804250:-1
position: 804250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803355-804250:-1:exon

LOC121303924
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: lncRNA
gene: LOC121303924
product: uncharacterized LOC121303924
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005947891.1
SIO_010081: LOC121303924
subclass of: SO_0000673
so part of: LOC121303924
location: complement(join(803355..803464,803522..803884,803941..804250))
location: region:803355-804250:-1
so has part: feature:803941-804250:-1:exon
so has part: feature:803522-803884:-1:exon
so has part: feature:803355-803464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:803941-804250:-1:exon

position:803941:-1
position: 803941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:803522-803884:-1:exon

position:803522:-1
position: 803522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803884:-1
position: 803884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:803355-803464:-1:exon

position:803464:-1
position: 803464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121303946
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303946
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(821444..825317)
location: region:821444-825317:-1
so has part: feature:821444-825317:-1:exon
subclass of: SO_0000010

121303946
type: Gene
SIO_000068: ncbigene

position:821444:-1
position: 821444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825317:-1
position: 825317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821444-825317:-1:exon

LOC121303946
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303946
product: serine/threonine-protein kinase Chk1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041234846.1
SIO_010081: LOC121303946
subclass of: SO_0000673
so part of: LOC121303946
location: complement(join(821444..822665,823248..823349,823735..823920,825177..825204,825307..825317))
location: region:821444-825317:-1
so has part: feature:825307-825317:-1:exon
so has part: feature:825177-825204:-1:exon
so has part: feature:823735-823920:-1:exon
so has part: feature:823248-823349:-1:exon
so has part: feature:821444-822665:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:825307-825317:-1:exon

position:825307:-1
position: 825307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:825177-825204:-1:exon

position:825177:-1
position: 825177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825204:-1
position: 825204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:823735-823920:-1:exon

position:823735:-1
position: 823735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823920:-1
position: 823920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:823248-823349:-1:exon

position:823248:-1
position: 823248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823349:-1
position: 823349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:821444-822665:-1:exon

position:822665:-1
position: 822665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121303946
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303946
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Chk1-like
translation: MVLRPLKYQQGKRAPPPRFTPLPFHSSLSLQSPWQRLVRRMTRFFTKLDADRSYASLKEVCEKMGYTWKKSCTNQVTVSTTDRRNNKLIFKVHLLEMEERILVDFRLSKGDGLEFKRHFLRIKRQLNDIISNHKVLLPVT
SIO_010081: LOC121303946
subclass of: SO_0000673
so part of: LOC121303946
location: complement(join(822570..822665,823248..823349,823735..823920,825177..825204,825307..825317))
location: region:822570-825317:-1
so has part: feature:825307-825317:-1:exon
so has part: feature:825177-825204:-1:exon
so has part: feature:823735-823920:-1:exon
so has part: feature:823248-823349:-1:exon
so has part: feature:822570-822665:-1:exon

XP_041090780.1
type: Protein
SIO_000068: ncbiprotein

position:822570:-1
position: 822570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825307-825317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:825177-825204:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823735-823920:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:823248-823349:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822570-822665:-1:exon

LOC121303947
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 825589..843300
location: region:825589-843300:1
so has part: feature:825589-843300:1:exon
subclass of: SO_0000010

121303947
type: Gene
SIO_000068: ncbigene

position:825589:1
position: 825589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843300:1
position: 843300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825589-843300:1:exon

LOC121303947
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303947
product: cell adhesion molecule-related/down-regulated by oncogenes-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041234847.1
SIO_010081: LOC121303947
subclass of: SO_0000673
so part of: LOC121303947
location: join(825589..825619,825783..826069,826226..826400,827000..827092,828066..828275,828723..828904,830968..831073,833053..833175,834279..834509,835554..835774,836310..836389,838677..838939,842760..843300)
location: region:825589-843300:1
so has part: feature:825589-825619:1:exon
so has part: feature:825783-826069:1:exon
so has part: feature:826226-826400:1:exon
so has part: feature:827000-827092:1:exon
so has part: feature:828066-828275:1:exon
so has part: feature:828723-828904:1:exon
so has part: feature:830968-831073:1:exon
so has part: feature:833053-833175:1:exon
so has part: feature:834279-834509:1:exon
so has part: feature:835554-835774:1:exon
so has part: feature:836310-836389:1:exon
so has part: feature:838677-838939:1:exon
so has part: feature:842760-843300:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:825589-825619:1:exon

position:825619:1
position: 825619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:825783-826069:1:exon

position:825783:1
position: 825783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826069:1
position: 826069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:826226-826400:1:exon

position:826226:1
position: 826226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826400:1
position: 826400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:827000-827092:1:exon

position:827000:1
position: 827000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827092:1
position: 827092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:828066-828275:1:exon

position:828066:1
position: 828066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828275:1
position: 828275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:828723-828904:1:exon

position:828723:1
position: 828723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828904:1
position: 828904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:830968-831073:1:exon

position:830968:1
position: 830968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831073:1
position: 831073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:833053-833175:1:exon

position:833053:1
position: 833053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833175:1
position: 833175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:834279-834509:1:exon

position:834279:1
position: 834279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:834509:1
position: 834509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:835554-835774:1:exon

position:835554:1
position: 835554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835774:1
position: 835774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:836310-836389:1:exon

position:836310:1
position: 836310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836389:1
position: 836389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:838677-838939:1:exon

position:838677:1
position: 838677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838939:1
position: 838939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:842760-843300:1:exon

position:842760:1
position: 842760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121303947
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes-like
translation: MQNLYRLGVCVPFESSTVGVAGDAPPPGGGADLVQSDEGEGGYRQEAGLGEDKATPTERTSADPPPEAPIILSAPQTHKPDMYDLVWRPGRDWGTPINAYFVKYRKLDDVGNMVGGWYTVRVPGSESELRLTELEPSSLYEVLMVARSQAGEGQPAMLTFRTSKERASTSKKTPPVTKVPPVKRLGVVIPGRHSGVVPEAPDRPTVSMATETSVYVTWIPRANGGSPITAFRVEYRRLGRSTEWGVAADNISPSKLSVEVRSLEPGTTYKFRVVAVNTYGESPHSASSRPYSVAGFSGRFSKPPITGPHIVYTEAVSDTQIMLKWTYTSSSNNNTPIQGFYIYYRPTDSDNDSDYKRDLVEGMKQWHLISHLQPETSYDIKMQCFNEGGESEYSNVMMCETRVKRAPGASDFPPVLPKDLVTPPSPSERGVGGGVLGSSPRSSDMLYLIVGSVLGVMVLILLVFIAMCLWKNRQQNIMHKYDPPRYLYQGSEMSAHMLEYTTLPGTGRINGSLHTLSNGCPHLHLKVSNGGALNGGNGLYPGLDEHPPPHLPNGGGMYSALPQTDPSECLSCRNCHNNNSRCFTKTNGTLPIMHHVGPCRQDSLEMVPLSHVSTPPHCDISAPEYPECHGETGEEGQEPGGNMTPPLSQYPCCQLGELHQECQEEEQGEDEPCMKIESSVFCWEPLSLPALDCNEKTAWISAGTAKDSLGGFIQAQLQET
SIO_010081: LOC121303947
subclass of: SO_0000673
so part of: LOC121303947
location: join(825589..825619,825783..826069,826226..826400,827000..827092,828066..828275,828723..828904,830968..831073,833053..833175,834279..834509,835554..835774,836310..836389,838677..838939,842760..842920)
location: region:825589-842920:1
so has part: feature:825589-825619:1:exon
so has part: feature:825783-826069:1:exon
so has part: feature:826226-826400:1:exon
so has part: feature:827000-827092:1:exon
so has part: feature:828066-828275:1:exon
so has part: feature:828723-828904:1:exon
so has part: feature:830968-831073:1:exon
so has part: feature:833053-833175:1:exon
so has part: feature:834279-834509:1:exon
so has part: feature:835554-835774:1:exon
so has part: feature:836310-836389:1:exon
so has part: feature:838677-838939:1:exon
so has part: feature:842760-842920:1:exon

XP_041090781.1
type: Protein
SIO_000068: ncbiprotein

position:842920:1
position: 842920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825589-825619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:825783-826069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:826226-826400:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:827000-827092:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:828066-828275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:828723-828904:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:830968-831073:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:833053-833175:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:834279-834509:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:835554-835774:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:836310-836389:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:838677-838939:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:842760-842920:1:exon

LOC121303948
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(849114..860775)
location: region:849114-860775:-1
so has part: feature:849114-860775:-1:exon
subclass of: SO_0000010

121303948
type: Gene
SIO_000068: ncbigene

position:849114:-1
position: 849114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860775:-1
position: 860775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849114-860775:-1:exon

LOC121303948
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303948
product: V-set and immunoglobulin domain-containing protein 10-like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041234849.1
SIO_010081: LOC121303948
subclass of: SO_0000673
so part of: LOC121303948
location: complement(join(849114..849769,849922..850019,850185..850209,851739..851861,853284..853616,853940..854230,854353..854613,855892..856152,857052..857327,858274..858549,858914..859267,860700..860775))
location: region:849114-860775:-1
so has part: feature:860700-860775:-1:exon
so has part: feature:858914-859267:-1:exon
so has part: feature:858274-858549:-1:exon
so has part: feature:857052-857327:-1:exon
so has part: feature:855892-856152:-1:exon
so has part: feature:854353-854613:-1:exon
so has part: feature:853940-854230:-1:exon
so has part: feature:853284-853616:-1:exon
so has part: feature:851739-851861:-1:exon
so has part: feature:850185-850209:-1:exon
so has part: feature:849922-850019:-1:exon
so has part: feature:849114-849769:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:860700-860775:-1:exon

position:860700:-1
position: 860700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:858914-859267:-1:exon

position:858914:-1
position: 858914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859267:-1
position: 859267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:858274-858549:-1:exon

position:858274:-1
position: 858274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858549:-1
position: 858549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:857052-857327:-1:exon

position:857052:-1
position: 857052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857327:-1
position: 857327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:855892-856152:-1:exon

position:855892:-1
position: 855892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856152:-1
position: 856152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:854353-854613:-1:exon

position:854353:-1
position: 854353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854613:-1
position: 854613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:853940-854230:-1:exon

position:853940:-1
position: 853940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854230:-1
position: 854230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:853284-853616:-1:exon

position:853284:-1
position: 853284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853616:-1
position: 853616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:851739-851861:-1:exon

position:851739:-1
position: 851739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851861:-1
position: 851861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:850185-850209:-1:exon

position:850185:-1
position: 850185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850209:-1
position: 850209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:849922-850019:-1:exon

position:849922:-1
position: 849922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850019:-1
position: 850019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:849114-849769:-1:exon

position:849769:-1
position: 849769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121303948
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-set and immunoglobulin domain-containing protein 10-like 2
translation: MGVESAGVRALWLTIFCCLLPSLAQGLMILDPGEVQYRYVQTKGIVGRSVMLECGQTLPNIFIWGFTKPGTESIKAVVYNYGQGPKLQKLASSLGDLSVISDSASLVFDNLKQSAEGLYTCQALHETNTETKLTYFYIDLLVLVPISKPFIQLSESSPVENSPLWMVCVVENGTGPINFVWEWQGRAGGLVRVSESNSSLMNLTGVNRNHTGWYSCLASNEVNQERSDTVWLDIIYGPDEPMINITPYAVTEQGYSAVERDTVSLLCQAPSNPPSHYIWFYNNSQVFSGQQFTISKILRGQTGYYTCLAQNSFLNTRTKTTVTLTVYYLPDERPACTILPADNYTQLSLWCSWLGGCPPASLRWTGPGERDLGAGSFSNLTQTRTGTETPNNSTFTCLPSHPALRSEASCNTTALLPQGAPRCFAVATRNNEYLMLSCGWEGGLPRALLWWSAGDGTVLGSSEEAANILVLKSSGAYSGKEFVCRGKHPLTLQSQQCRFKLEAPVLVTQRSVVSVFEGSDVQLTCILKATYPASEIIWYNNQNQNVWDAPQKYLLQREAAWSNLTVRETDGNRDEGEYWCAATNAVGGAQIPITLNVKKYPSPPNVTISKLLYSRQRTEVELEWMTRGSGDLTGFIVERQVARKSSPSSGTYPVGKQDRAPSWETVAGQINPDVRGHKLSGLDPATLYAFRIMAVNHRTMGYPSEVKTPADPPFNAYPAVIGAAIAGMIVATVGTMLVFQYIIRNRENNPRLHDMFFGMQPAESRENISNPEDEWGAMGSEDGGETTPQNTEGAVATDSADPTPSAEAPPLPPPPGDENEPVNVTITVTATG
SIO_010081: LOC121303948
subclass of: SO_0000673
so part of: LOC121303948
location: complement(join(849645..849769,849922..850019,850185..850209,851739..851861,853284..853616,853940..854230,854353..854613,855892..856152,857052..857327,858274..858549,858914..859267,860700..860775))
location: region:849645-860775:-1
so has part: feature:860700-860775:-1:exon
so has part: feature:858914-859267:-1:exon
so has part: feature:858274-858549:-1:exon
so has part: feature:857052-857327:-1:exon
so has part: feature:855892-856152:-1:exon
so has part: feature:854353-854613:-1:exon
so has part: feature:853940-854230:-1:exon
so has part: feature:853284-853616:-1:exon
so has part: feature:851739-851861:-1:exon
so has part: feature:850185-850209:-1:exon
so has part: feature:849922-850019:-1:exon
so has part: feature:849645-849769:-1:exon

XP_041090783.1
type: Protein
SIO_000068: ncbiprotein

position:849645:-1
position: 849645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:860700-860775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:858914-859267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:858274-858549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857052-857327:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:855892-856152:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:854353-854613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:853940-854230:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:853284-853616:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:851739-851861:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:850185-850209:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:849922-850019:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:849645-849769:-1:exon

treh
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: treh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(873102..883944)
location: region:873102-883944:-1
so has part: feature:873102-883944:-1:exon
subclass of: SO_0000010

121303949
type: Gene
SIO_000068: ncbigene

position:873102:-1
position: 873102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883944:-1
position: 883944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:873102-883944:-1:exon

treh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: treh
product: trehalase (brush-border membrane glycoprotein)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041234850.1
SIO_010081: treh
subclass of: SO_0000673
so part of: treh
location: complement(join(873102..874238,874594..874647,875416..875528,876336..876447,877520..877737,878243..878443,878579..878628,878812..878934,879141..879257,881338..881430,881582..881682,881922..882009,882580..882727,883373..883473,883928..883944))
location: region:873102-883944:-1
so has part: feature:883928-883944:-1:exon
so has part: feature:883373-883473:-1:exon
so has part: feature:882580-882727:-1:exon
so has part: feature:881922-882009:-1:exon
so has part: feature:881582-881682:-1:exon
so has part: feature:881338-881430:-1:exon
so has part: feature:879141-879257:-1:exon
so has part: feature:878812-878934:-1:exon
so has part: feature:878579-878628:-1:exon
so has part: feature:878243-878443:-1:exon
so has part: feature:877520-877737:-1:exon
so has part: feature:876336-876447:-1:exon
so has part: feature:875416-875528:-1:exon
so has part: feature:874594-874647:-1:exon
so has part: feature:873102-874238:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:883928-883944:-1:exon

position:883928:-1
position: 883928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:883373-883473:-1:exon

position:883373:-1
position: 883373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883473:-1
position: 883473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:882580-882727:-1:exon

position:882580:-1
position: 882580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882727:-1
position: 882727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:881922-882009:-1:exon

position:881922:-1
position: 881922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882009:-1
position: 882009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:881582-881682:-1:exon

position:881582:-1
position: 881582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881682:-1
position: 881682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:881338-881430:-1:exon

position:881338:-1
position: 881338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881430:-1
position: 881430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:879141-879257:-1:exon

position:879141:-1
position: 879141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879257:-1
position: 879257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:878812-878934:-1:exon

position:878812:-1
position: 878812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878934:-1
position: 878934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:878579-878628:-1:exon

position:878579:-1
position: 878579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878628:-1
position: 878628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:878243-878443:-1:exon

position:878243:-1
position: 878243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878443:-1
position: 878443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:877520-877737:-1:exon

position:877520:-1
position: 877520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877737:-1
position: 877737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:876336-876447:-1:exon

position:876336:-1
position: 876336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876447:-1
position: 876447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:875416-875528:-1:exon

position:875416:-1
position: 875416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875528:-1
position: 875528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:874594-874647:-1:exon

position:874594:-1
position: 874594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874647:-1
position: 874647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:873102-874238:-1:exon

position:874238:-1
position: 874238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

treh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: treh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trehalase
translation: MQLPLCPIYCSGDLLKQVQLAKLFDDDKHFVDMKLKEPPEKVLSAFHNLTAGAPGGKPSVAQLREFLGSFFEAPGQEFEPWTPADWHSGPQFLERISDPSLRSWAAELHALWKSLGRKVRDDVKNHPELYSQIYTPNPIIVPGGRFREIYYWDSYWVINGLLLSEMKDTAKGMIENFFHLVHRYGFIPNGGRVYYEQRSQPPFLTLMVESYYQATLDKEFLRGAVELLEQEYWFWMRNRSVSIEIQGALHTLNQYSVQAGEPRPESYSDDWELAEGLTEAGKQALWVELQSGAESGWDFSSRWFIDSKGQNRGTLRDIRTRHIVPVDLNALLCRNERTIASFHRALGNLEMAEQFEVALKSRVEAVRAVFWDESLGAWFDYSLQTKSSHQAFYPSNLAPLWAECFSEPSAGERALRYLQDSGVLGYRNGIPTSQMESGEQWDYPNAWPPLQLMIIEGLMKLSSEKAEQVTFDLAQKWIRTNWAAYQRDKAMFEKYDVNGDGKPGGGGEYDVQLGFGWTNGVALQLLNQFGGQLTSGCPPLHTCLWVWLVSTALVFFM
SIO_010081: treh
subclass of: SO_0000673
so part of: treh
location: complement(join(874101..874238,874594..874647,875416..875528,876336..876447,877520..877737,878243..878443,878579..878628,878812..878934,879141..879257,881338..881430,881582..881682,881922..882009,882580..882727,883373..883473,883928..883944))
location: region:874101-883944:-1
so has part: feature:883928-883944:-1:exon
so has part: feature:883373-883473:-1:exon
so has part: feature:882580-882727:-1:exon
so has part: feature:881922-882009:-1:exon
so has part: feature:881582-881682:-1:exon
so has part: feature:881338-881430:-1:exon
so has part: feature:879141-879257:-1:exon
so has part: feature:878812-878934:-1:exon
so has part: feature:878579-878628:-1:exon
so has part: feature:878243-878443:-1:exon
so has part: feature:877520-877737:-1:exon
so has part: feature:876336-876447:-1:exon
so has part: feature:875416-875528:-1:exon
so has part: feature:874594-874647:-1:exon
so has part: feature:874101-874238:-1:exon

XP_041090784.1
type: Protein
SIO_000068: ncbiprotein

position:874101:-1
position: 874101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:883928-883944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:883373-883473:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:882580-882727:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:881922-882009:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:881582-881682:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:881338-881430:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:879141-879257:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878812-878934:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:878579-878628:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:878243-878443:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:877520-877737:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:876336-876447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:875416-875528:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:874594-874647:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:874101-874238:-1:exon

LOC121303978
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(888991..894905)
location: region:888991-894905:-1
so has part: feature:888991-894905:-1:exon
subclass of: SO_0000011

121303978
type: Gene
SIO_000068: ncbigene

position:888991:-1
position: 888991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894905:-1
position: 894905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:888991-894905:-1:exon

LOC121303978
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: lncRNA
gene: LOC121303978
product: uncharacterized LOC121303978
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005947896.1
SIO_010081: LOC121303978
subclass of: SO_0000673
so part of: LOC121303978
location: complement(join(888991..890028,894396..894514,894828..894905))
location: region:888991-894905:-1
so has part: feature:894828-894905:-1:exon
so has part: feature:894396-894514:-1:exon
so has part: feature:888991-890028:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:894828-894905:-1:exon

position:894828:-1
position: 894828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:894396-894514:-1:exon

position:894396:-1
position: 894396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894514:-1
position: 894514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:888991-890028:-1:exon

position:890028:-1
position: 890028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121303950
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303950
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 906353..913363
location: region:906353-913363:1
so has part: feature:906353-913363:1:exon
subclass of: SO_0000010

121303950
type: Gene
SIO_000068: ncbigene

position:906353:1
position: 906353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913363:1
position: 913363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:906353-913363:1:exon

LOC121303950
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303950
product: amyloid-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041234851.1
SIO_010081: LOC121303950
subclass of: SO_0000673
so part of: LOC121303950
location: join(906353..906407,909112..909266,909980..910054,911203..911355,912138..913363)
location: region:906353-913363:1
so has part: feature:906353-906407:1:exon
so has part: feature:909112-909266:1:exon
so has part: feature:909980-910054:1:exon
so has part: feature:911203-911355:1:exon
so has part: feature:912138-913363:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:906353-906407:1:exon

position:906407:1
position: 906407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:909112-909266:1:exon

position:909112:1
position: 909112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909266:1
position: 909266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:909980-910054:1:exon

position:909980:1
position: 909980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910054:1
position: 910054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:911203-911355:1:exon

position:911203:1
position: 911203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911355:1
position: 911355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:912138-913363:1:exon

position:912138:1
position: 912138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121303950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303950
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2
translation: MGAQCCVPESSSRPGSEGEVLSPRLSLLAPLFVEEPVSGVGVGSGTAGLDGLIGAEERVINSKNRMSDNVVIDETLDVKEVIFNAESLSGVDEDLVSYRPLGEFSFSSSTLIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLSKMQNHGYENPTYKYLEQMQI
SIO_010081: LOC121303950
subclass of: SO_0000673
so part of: LOC121303950
location: join(906353..906407,909112..909266,909980..910054,911203..911355,912138..912239)
location: region:906353-912239:1
so has part: feature:906353-906407:1:exon
so has part: feature:909112-909266:1:exon
so has part: feature:909980-910054:1:exon
so has part: feature:911203-911355:1:exon
so has part: feature:912138-912239:1:exon

XP_041090785.1
type: Protein
SIO_000068: ncbiprotein

position:912239:1
position: 912239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:906353-906407:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:909112-909266:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:909980-910054:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:911203-911355:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:912138-912239:1:exon

LOC121303951
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 917536..939157
location: region:917536-939157:1
so has part: feature:917536-939157:1:exon
subclass of: SO_0000010

121303951
type: Gene
SIO_000068: ncbigene

position:917536:1
position: 917536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939157:1
position: 939157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917536-939157:1:exon

LOC121303951
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303951
product: nuclear factor related to kappa-B-binding protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041234852.1
SIO_010081: LOC121303951
subclass of: SO_0000673
so part of: LOC121303951
location: join(917536..918061,929370..929526,929854..929984,930109..930179,930739..930899,931532..931558,932071..932305,933146..933288,933467..933573,934131..934327,934979..935267,935938..936149,936333..937032,937432..937538,937839..937974,938321..939157)
location: region:917536-939157:1
so has part: feature:917536-918061:1:exon
so has part: feature:929370-929526:1:exon
so has part: feature:929854-929984:1:exon
so has part: feature:930109-930179:1:exon
so has part: feature:930739-930899:1:exon
so has part: feature:931532-931558:1:exon
so has part: feature:932071-932305:1:exon
so has part: feature:933146-933288:1:exon
so has part: feature:933467-933573:1:exon
so has part: feature:934131-934327:1:exon
so has part: feature:934979-935267:1:exon
so has part: feature:935938-936149:1:exon
so has part: feature:936333-937032:1:exon
so has part: feature:937432-937538:1:exon
so has part: feature:937839-937974:1:exon
so has part: feature:938321-939157:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:917536-918061:1:exon

position:918061:1
position: 918061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:929370-929526:1:exon

position:929370:1
position: 929370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929526:1
position: 929526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:929854-929984:1:exon

position:929854:1
position: 929854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929984:1
position: 929984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:930109-930179:1:exon

position:930109:1
position: 930109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930179:1
position: 930179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:930739-930899:1:exon

position:930739:1
position: 930739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930899:1
position: 930899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:931532-931558:1:exon

position:931532:1
position: 931532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:931558:1
position: 931558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:932071-932305:1:exon

position:932071:1
position: 932071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932305:1
position: 932305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:933146-933288:1:exon

position:933146:1
position: 933146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933288:1
position: 933288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:933467-933573:1:exon

position:933467:1
position: 933467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933573:1
position: 933573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:934131-934327:1:exon

position:934131:1
position: 934131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934327:1
position: 934327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:934979-935267:1:exon

position:934979:1
position: 934979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935267:1
position: 935267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:935938-936149:1:exon

position:935938:1
position: 935938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936149:1
position: 936149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:936333-937032:1:exon

position:936333:1
position: 936333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937032:1
position: 937032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:937432-937538:1:exon

position:937432:1
position: 937432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937538:1
position: 937538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:937839-937974:1:exon

position:937839:1
position: 937839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937974:1
position: 937974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:938321-939157:1:exon

position:938321:1
position: 938321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121303951
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor related to kappa-B-binding protein-like
translation: MNKMDYLDSGMRYNPKSGDDSWDTGVQFLPASNSKKLEKKGPKKVLAIVAVLVFITVISVMTGLLVWHFHFRKEMKVFKMYAGTMLITSETFQDAYEDSASPEFSALAAKVQDQLKTLYSNTPQLARYYVRSTVNAFSEGSVIAYYISEFDVPANQEAAVDSALAEIGKKMVRSQRKLQPQQLRVDEVVTLPMDPRMARNYKCSYNLHAKPGVIGSLSSPGFPNSPYPADTHCLWRLRADPGYVLKLNFITFSLEDDCSKDFARVYDSLGPLETRVLAEKCGTFSPSQPLVLVSSGNVMLLALVTDDNKNFPGFKAEYSQIPKDSSACGGQLTGSSGTFNSPNYPAFYSPRMNCTWKIQVSGLQKSSSKEGGPKTPGGGAGELAEPGSLQSSVLSQPATPKSPTPPCASTPSKTTASIGAEPSKTSQSVLLVSPSSMPQLSSVLCTSQPSPLPPHQQLPHQAGMQPAARVMAHSVTSTLPQVRVVTAQAGLATSAGSQQASLVHQGHQQIRVPVTVAHSKGITQTMVTLPLRTQSAGSPVQVQASRTQTSITVTGLASAVTVTKSSLSSPGSPAHTSTPSTVLQSIAGQNIIKQVRITGQLGMKSQAGAGIPLTATNLRIQGKDVLRLPPSSITTDSTGQTVLRITPDMMATLTKSPVTTVKLTPDMLSASSGGRPLSATLHVTSSSSAADTVSAIKAACSSAGGGATSLVKSEAASIRLMPALAVTMADQKGKTVTASTDSKPATTIRIMPGLGVIPQKPGQTITVATAGGKQVPASSSGAPVSGAATVTIATGHKGGTSTPFSLGAGTATMRQVPVSATVVSTTQQGKLPARITVPLSVLSQPLKGKSMVTAPLLKGNIGTNISSLGRNIILTTMPAGTKLIAGNKPVSFVTAQQLQQLQQQGQATQVRIQTVQTQHLQQRTASGSPKPVSTVVVTTAPSPKRTPDPQ
SIO_010081: LOC121303951
subclass of: SO_0000673
so part of: LOC121303951
location: join(918008..918061,929370..929526,929854..929984,930109..930179,930739..930899,931532..931558,932071..932305,933146..933288,933467..933573,934131..934327,934979..935267,935938..936149,936333..937032,937432..937538,937839..937974,938321..938446)
location: region:918008-938446:1
so has part: feature:918008-918061:1:exon
so has part: feature:929370-929526:1:exon
so has part: feature:929854-929984:1:exon
so has part: feature:930109-930179:1:exon
so has part: feature:930739-930899:1:exon
so has part: feature:931532-931558:1:exon
so has part: feature:932071-932305:1:exon
so has part: feature:933146-933288:1:exon
so has part: feature:933467-933573:1:exon
so has part: feature:934131-934327:1:exon
so has part: feature:934979-935267:1:exon
so has part: feature:935938-936149:1:exon
so has part: feature:936333-937032:1:exon
so has part: feature:937432-937538:1:exon
so has part: feature:937839-937974:1:exon
so has part: feature:938321-938446:1:exon

XP_041090786.1
type: Protein
SIO_000068: ncbiprotein

position:918008:1
position: 918008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:938446:1
position: 938446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:918008-918061:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:929370-929526:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:929854-929984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:930109-930179:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:930739-930899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:931532-931558:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:932071-932305:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:933146-933288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:933467-933573:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:934131-934327:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:934979-935267:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:935938-936149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:936333-937032:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:937432-937538:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:937839-937974:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:938321-938446:1:exon

LOC121304092
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304092
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(918830..920676)
location: region:918830-920676:-1
so has part: feature:918830-920676:-1:exon
subclass of: SO_0000011

121304092
type: Gene
SIO_000068: ncbigene

position:918830:-1
position: 918830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:920676:-1
position: 920676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:918830-920676:-1:exon

LOC121304092
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: lncRNA
gene: LOC121304092
product: uncharacterized LOC121304092
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005947916.1
SIO_010081: LOC121304092
subclass of: SO_0000673
so part of: LOC121304092
location: complement(join(918830..919312,919582..919928,920188..920676))
location: region:918830-920676:-1
so has part: feature:920188-920676:-1:exon
so has part: feature:919582-919928:-1:exon
so has part: feature:918830-919312:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:920188-920676:-1:exon

position:920188:-1
position: 920188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:919582-919928:-1:exon

position:919582:-1
position: 919582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919928:-1
position: 919928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:918830-919312:-1:exon

position:919312:-1
position: 919312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tmem45b
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: tmem45b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(940205..946452)
location: region:940205-946452:-1
so has part: feature:940205-946452:-1:exon
subclass of: SO_0000010

121303992
type: Gene
SIO_000068: ncbigene

position:940205:-1
position: 940205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946452:-1
position: 946452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:940205-946452:-1:exon

tmem45b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: tmem45b
product: transmembrane protein 45B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_041234906.1
SIO_010081: tmem45b
subclass of: SO_0000673
so part of: tmem45b
location: complement(join(940205..940868,941145..941290,941817..942001,942227..942439,942695..942901,946183..946452))
location: region:940205-946452:-1
so has part: feature:946183-946452:-1:exon
so has part: feature:942695-942901:-1:exon
so has part: feature:942227-942439:-1:exon
so has part: feature:941817-942001:-1:exon
so has part: feature:941145-941290:-1:exon
so has part: feature:940205-940868:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:946183-946452:-1:exon

position:946183:-1
position: 946183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:942695-942901:-1:exon

position:942695:-1
position: 942695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942901:-1
position: 942901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:942227-942439:-1:exon

position:942227:-1
position: 942227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942439:-1
position: 942439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:941817-942001:-1:exon

position:941817:-1
position: 941817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942001:-1
position: 942001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:941145-941290:-1:exon

position:941145:-1
position: 941145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941290:-1
position: 941290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:940205-940868:-1:exon

position:940868:-1
position: 940868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tmem45b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: tmem45b
product: transmembrane protein 45B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_041234905.1
SIO_010081: tmem45b
subclass of: SO_0000673
so part of: tmem45b
location: complement(join(940205..940868,941145..941290,941817..942001,942227..942439,942695..942904,946183..946450))
location: region:940205-946450:-1
so has part: feature:946183-946450:-1:exon
so has part: feature:942695-942904:-1:exon
so has part: feature:942227-942439:-1:exon
so has part: feature:941817-942001:-1:exon
so has part: feature:941145-941290:-1:exon
so has part: feature:940205-940868:-1:exon

position:946450:-1
position: 946450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946183-946450:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:942695-942904:-1:exon

position:942904:-1
position: 942904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:942227-942439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:941817-942001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:941145-941290:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940205-940868:-1:exon

tmem45b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: tmem45b
product: transmembrane protein 45B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041234903.1
SIO_010081: tmem45b
subclass of: SO_0000673
so part of: tmem45b
location: complement(join(940205..940868,941145..941290,941817..942001,942227..942439,942695..942904,944894..945506))
location: region:940205-945506:-1
so has part: feature:944894-945506:-1:exon
so has part: feature:942695-942904:-1:exon
so has part: feature:942227-942439:-1:exon
so has part: feature:941817-942001:-1:exon
so has part: feature:941145-941290:-1:exon
so has part: feature:940205-940868:-1:exon

position:945506:-1
position: 945506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944894-945506:-1:exon

position:944894:-1
position: 944894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:942695-942904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:942227-942439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:941817-942001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:941145-941290:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940205-940868:-1:exon

tmem45b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: tmem45b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 45B isoform X1
translation: MCVATPQILPQFKAGPLVEGMANFKGHALPGSFFLLFGLWWSVKYPLLYFWRKNRPGGLVRMNPDSQRLDLIEGVVKVVFSIVGILAEQFVPDGPHLHLTQSEGHSWVKLMNWQHSTMYLFYGISGVVDILTVSPLGVPLGLDRLMLSVAVFIEGFLFYFHVHNRAPLDVHIHSLLLIAVFGGAFSILLEVFQRDHIVLELFRSSLAILQGTWFWQIGFVLFPPGGGTAWDDSDHDNIMFITMCFCWHYATALLIMALNYALVWGCMRRCAGRTGADPELGLLMKSSKNTSQKALLQESDEE
SIO_010081: tmem45b
subclass of: SO_0000673
so part of: tmem45b
location: complement(join(940754..940868,941145..941290,941817..942001,942227..942439,942695..942904,944894..944933))
location: region:940754-944933:-1
so has part: feature:944894-944933:-1:exon
so has part: feature:942695-942904:-1:exon
so has part: feature:942227-942439:-1:exon
so has part: feature:941817-942001:-1:exon
so has part: feature:941145-941290:-1:exon
so has part: feature:940754-940868:-1:exon

XP_041090837.1
type: Protein
SIO_000068: ncbiprotein

position:940754:-1
position: 940754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944933:-1
position: 944933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944894-944933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:942695-942904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:942227-942439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:941817-942001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:941145-941290:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940754-940868:-1:exon

tmem45b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: tmem45b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 45B isoform X2
translation: MANFKGHALPGSFFLLFGLWWSVKYPLLYFWRKNRPGGLVRMNPDSQRLDLIEGVVKVVFSIVGILAEQFVPDGPHLHLTQSEGHSWVKLMNWQHSTMYLFYGISGVVDILTVSPLGVPLGLDRLMLSVAVFIEGFLFYFHVHNRAPLDVHIHSLLLIAVFGGAFSILLEVFQRDHIVLELFRSSLAILQGTWFWQIGFVLFPPGGGTAWDDSDHDNIMFITMCFCWHYATALLIMALNYALVWGCMRRCAGRTGADPELGLLMKSSKNTSQKALLQESDEE
SIO_010081: tmem45b
subclass of: SO_0000673
so part of: tmem45b
location: complement(join(940754..940868,941145..941290,941817..942001,942227..942439,942695..942884))
location: region:940754-942884:-1
so has part: feature:942695-942884:-1:exon
so has part: feature:942227-942439:-1:exon
so has part: feature:941817-942001:-1:exon
so has part: feature:941145-941290:-1:exon
so has part: feature:940754-940868:-1:exon

XP_041090839.1
type: Protein
SIO_000068: ncbiprotein

position:942884:-1
position: 942884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:942695-942884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:942227-942439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:941817-942001:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:941145-941290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940754-940868:-1:exon

tmem45b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: tmem45b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 45B isoform X2
translation: MANFKGHALPGSFFLLFGLWWSVKYPLLYFWRKNRPGGLVRMNPDSQRLDLIEGVVKVVFSIVGILAEQFVPDGPHLHLTQSEGHSWVKLMNWQHSTMYLFYGISGVVDILTVSPLGVPLGLDRLMLSVAVFIEGFLFYFHVHNRAPLDVHIHSLLLIAVFGGAFSILLEVFQRDHIVLELFRSSLAILQGTWFWQIGFVLFPPGGGTAWDDSDHDNIMFITMCFCWHYATALLIMALNYALVWGCMRRCAGRTGADPELGLLMKSSKNTSQKALLQESDEE
SIO_010081: tmem45b
subclass of: SO_0000673
so part of: tmem45b
location: complement(join(940754..940868,941145..941290,941817..942001,942227..942439,942695..942884))
location: region:940754-942884:-1
so has part: feature:942695-942884:-1:exon
so has part: feature:942227-942439:-1:exon
so has part: feature:941817-942001:-1:exon
so has part: feature:941145-941290:-1:exon
so has part: feature:940754-940868:-1:exon

XP_041090840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:942695-942884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:942227-942439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:941817-942001:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:941145-941290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940754-940868:-1:exon

LOC121303975
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(951932..963786)
location: region:951932-963786:-1
so has part: feature:951932-963786:-1:exon
subclass of: SO_0000011

121303975
type: Gene
SIO_000068: ncbigene

position:951932:-1
position: 951932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963786:-1
position: 963786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:951932-963786:-1:exon

LOC121303975
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: lncRNA
gene: LOC121303975
product: uncharacterized LOC121303975
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005947894.1
SIO_010081: LOC121303975
subclass of: SO_0000673
so part of: LOC121303975
location: complement(join(951932..952141,955788..955976,963683..963786))
location: region:951932-963786:-1
so has part: feature:963683-963786:-1:exon
so has part: feature:955788-955976:-1:exon
so has part: feature:951932-952141:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:963683-963786:-1:exon

position:963683:-1
position: 963683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:955788-955976:-1:exon

position:955788:-1
position: 955788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:955976:-1
position: 955976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:951932-952141:-1:exon

position:952141:-1
position: 952141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nectin1b
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: nectin1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1114715..1193409)
location: region:1114715-1193409:-1
so has part: feature:1114715-1193409:-1:exon
subclass of: SO_0000010

121304011
type: Gene
SIO_000068: ncbigene

position:1114715:-1
position: 1114715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193409:-1
position: 1193409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1114715-1193409:-1:exon

nectin1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: nectin1b
product: nectin cell adhesion molecule 1b, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041234941.1
SIO_010081: nectin1b
subclass of: SO_0000673
so part of: nectin1b
location: complement(join(1114715..1114806,1136732..1136883,1139721..1139838,1140394..1140696,1142803..1143174,1192440..1193409))
location: region:1114715-1193409:-1
so has part: feature:1192440-1193409:-1:exon
so has part: feature:1142803-1143174:-1:exon
so has part: feature:1140394-1140696:-1:exon
so has part: feature:1139721-1139838:-1:exon
so has part: feature:1136732-1136883:-1:exon
so has part: feature:1114715-1114806:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1192440-1193409:-1:exon

position:1192440:-1
position: 1192440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1142803-1143174:-1:exon

position:1142803:-1
position: 1142803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143174:-1
position: 1143174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1140394-1140696:-1:exon

position:1140394:-1
position: 1140394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140696:-1
position: 1140696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1139721-1139838:-1:exon

position:1139721:-1
position: 1139721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1139838:-1
position: 1139838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1136732-1136883:-1:exon

position:1136732:-1
position: 1136732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136883:-1
position: 1136883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1114715-1114806:-1:exon

position:1114806:-1
position: 1114806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nectin1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: nectin1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nectin cell adhesion molecule 1b isoform X5
translation: MGGEIAVQLHPVVSAAFSALAIYYYYYYFFFRYLYFPQMKTHSQRKTRRFQDRDMAALILPSFWISLLAVTLSAAQSQVVQVDDSVSGFVDTEVVLSCTFSNTNPNVKITQVTWQKLLNGTKQNVAIANPTMGVSVLPPYKDRVTFRNPAVGYRTPSLEDATIRLSGLRLSDEAAYICEYATFPTGNRENQLNLTVLAKPVIQMTLTSPTIIAQAGQTSKKTVATCVSSNGKPPSVITWETKLKGEPTFQETRNPNGTVTVRSNYLVVPSREIHQQQLTCIVNYQSERTTHSLTLNVLYEPEVTIEGFDGNWYLNRQDVKLTCKSDANPPVTVYQWKLLNGTMPVNVEVLNSTLFFKGPVTSDLAGTYVCEAANVIGTRSGLVEVNVTDILNSSSISPPHLPSRDTCPRNKGK
SIO_010081: nectin1b
subclass of: SO_0000673
so part of: nectin1b
location: complement(join(1114730..1114806,1136732..1136883,1139721..1139838,1140394..1140696,1142803..1143174,1192440..1192659))
location: region:1114730-1192659:-1
so has part: feature:1192440-1192659:-1:exon
so has part: feature:1142803-1143174:-1:exon
so has part: feature:1140394-1140696:-1:exon
so has part: feature:1139721-1139838:-1:exon
so has part: feature:1136732-1136883:-1:exon
so has part: feature:1114730-1114806:-1:exon

XP_041090875.1
type: Protein
SIO_000068: ncbiprotein

position:1114730:-1
position: 1114730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1192659:-1
position: 1192659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1192440-1192659:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142803-1143174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1140394-1140696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1139721-1139838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136732-1136883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1114730-1114806:-1:exon

nectin1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: nectin1b
product: nectin cell adhesion molecule 1b, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_041234940.1
SIO_010081: nectin1b
subclass of: SO_0000673
so part of: nectin1b
location: complement(join(1115608..1115753,1136732..1136883,1139721..1139838,1140394..1140696,1142803..1143174,1192440..1193409))
location: region:1115608-1193409:-1
so has part: feature:1192440-1193409:-1:exon
so has part: feature:1142803-1143174:-1:exon
so has part: feature:1140394-1140696:-1:exon
so has part: feature:1139721-1139838:-1:exon
so has part: feature:1136732-1136883:-1:exon
so has part: feature:1115608-1115753:-1:exon

position:1115608:-1
position: 1115608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1192440-1193409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142803-1143174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1140394-1140696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1139721-1139838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136732-1136883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1115608-1115753:-1:exon

position:1115753:-1
position: 1115753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nectin1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: nectin1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nectin cell adhesion molecule 1b isoform X4
translation: MGGEIAVQLHPVVSAAFSALAIYYYYYYFFFRYLYFPQMKTHSQRKTRRFQDRDMAALILPSFWISLLAVTLSAAQSQVVQVDDSVSGFVDTEVVLSCTFSNTNPNVKITQVTWQKLLNGTKQNVAIANPTMGVSVLPPYKDRVTFRNPAVGYRTPSLEDATIRLSGLRLSDEAAYICEYATFPTGNRENQLNLTVLAKPVIQMTLTSPTIIAQAGQTSKKTVATCVSSNGKPPSVITWETKLKGEPTFQETRNPNGTVTVRSNYLVVPSREIHQQQLTCIVNYQSERTTHSLTLNVLYEPEVTIEGFDGNWYLNRQDVKLTCKSDANPPVTVYQWKLLNGTMPVNVEVLNSTLFFKGPVTSDLAGTYVCEAANVIGTRSGLVEVNVTGGRLSPSAKRLIPDSPLLCKFSVYLIK
SIO_010081: nectin1b
subclass of: SO_0000673
so part of: nectin1b
location: complement(join(1115671..1115753,1136732..1136883,1139721..1139838,1140394..1140696,1142803..1143174,1192440..1192659))
location: region:1115671-1192659:-1
so has part: feature:1192440-1192659:-1:exon
so has part: feature:1142803-1143174:-1:exon
so has part: feature:1140394-1140696:-1:exon
so has part: feature:1139721-1139838:-1:exon
so has part: feature:1136732-1136883:-1:exon
so has part: feature:1115671-1115753:-1:exon

XP_041090874.1
type: Protein
SIO_000068: ncbiprotein

position:1115671:-1
position: 1115671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1192440-1192659:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142803-1143174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1140394-1140696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1139721-1139838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136732-1136883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1115671-1115753:-1:exon

nectin1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: nectin1b
product: nectin cell adhesion molecule 1b, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041234939.1
SIO_010081: nectin1b
subclass of: SO_0000673
so part of: nectin1b
location: complement(join(1120530..1122298,1136732..1136883,1139721..1139838,1140394..1140696,1142803..1143174,1161426..1161450))
location: region:1120530-1161450:-1
so has part: feature:1161426-1161450:-1:exon
so has part: feature:1142803-1143174:-1:exon
so has part: feature:1140394-1140696:-1:exon
so has part: feature:1139721-1139838:-1:exon
so has part: feature:1136732-1136883:-1:exon
so has part: feature:1120530-1122298:-1:exon

position:1120530:-1
position: 1120530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161450:-1
position: 1161450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1161426-1161450:-1:exon

position:1161426:-1
position: 1161426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1142803-1143174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1140394-1140696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1139721-1139838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136732-1136883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1120530-1122298:-1:exon

position:1122298:-1
position: 1122298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nectin1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: nectin1b
product: nectin cell adhesion molecule 1b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_041234937.1
SIO_010081: nectin1b
subclass of: SO_0000673
so part of: nectin1b
location: complement(join(1120531..1122298,1136732..1136883,1139721..1139838,1140394..1140696,1142803..1143174,1192440..1192564,1192896..1193408))
location: region:1120531-1193408:-1
so has part: feature:1192896-1193408:-1:exon
so has part: feature:1192440-1192564:-1:exon
so has part: feature:1142803-1143174:-1:exon
so has part: feature:1140394-1140696:-1:exon
so has part: feature:1139721-1139838:-1:exon
so has part: feature:1136732-1136883:-1:exon
so has part: feature:1120531-1122298:-1:exon

position:1120531:-1
position: 1120531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193408:-1
position: 1193408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1192896-1193408:-1:exon

position:1192896:-1
position: 1192896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1192440-1192564:-1:exon

position:1192564:-1
position: 1192564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1142803-1143174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1140394-1140696:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1139721-1139838:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1136732-1136883:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1120531-1122298:-1:exon

nectin1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: nectin1b
product: nectin cell adhesion molecule 1b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_041234936.1
SIO_010081: nectin1b
subclass of: SO_0000673
so part of: nectin1b
location: complement(join(1120531..1122298,1136732..1136883,1139721..1139838,1140394..1140696,1142803..1143174,1192440..1193408))
location: region:1120531-1193408:-1
so has part: feature:1192440-1193408:-1:exon
so has part: feature:1142803-1143174:-1:exon
so has part: feature:1140394-1140696:-1:exon
so has part: feature:1139721-1139838:-1:exon
so has part: feature:1136732-1136883:-1:exon
so has part: feature:1120531-1122298:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1192440-1193408:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142803-1143174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1140394-1140696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1139721-1139838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136732-1136883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1120531-1122298:-1:exon

nectin1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: nectin1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nectin cell adhesion molecule 1b isoform X1
translation: MGGEIAVQLHPVVSAAFSALAIYYYYYYFFFRYLYFPQMKTHSQRKTRRFQDRDMAALILPSFWISLLAVTLSAAQSQVVQVDDSVSGFVDTEVVLSCTFSNTNPNVKITQVTWQKLLNGTKQNVAIANPTMGVSVLPPYKDRVTFRNPAVGYRTPSLEDATIRLSGLRLSDEAAYICEYATFPTGNRENQLNLTVLAKPVIQMTLTSPTIIAQAGQTSKKTVATCVSSNGKPPSVITWETKLKGEPTFQETRNPNGTVTVRSNYLVVPSREIHQQQLTCIVNYQSERTTHSLTLNVLYEPEVTIEGFDGNWYLNRQDVKLTCKSDANPPVTVYQWKLLNGTMPVNVEVLNSTLFFKGPVTSDLAGTYVCEAANVIGTRSGLVEVNVTEFPNIPGGPRIPPDEPSSGPVAVIGCAVGGVILLGLVAVVLFVFLRRRQRTFKGDYNTKKHVFGNGYSKAAGLPHHPPMPQSLQYPDDSDDEKKPAAISGLGVEQDFDPDSEDLKRPYFTVDEGESHEDFDGRTLSFQYDPEPEITDDMVSQNDGSVISKKEWYV
SIO_010081: nectin1b
subclass of: SO_0000673
so part of: nectin1b
location: complement(join(1121802..1122298,1136732..1136883,1139721..1139838,1140394..1140696,1142803..1143174,1192440..1192659))
location: region:1121802-1192659:-1
so has part: feature:1192440-1192659:-1:exon
so has part: feature:1142803-1143174:-1:exon
so has part: feature:1140394-1140696:-1:exon
so has part: feature:1139721-1139838:-1:exon
so has part: feature:1136732-1136883:-1:exon
so has part: feature:1121802-1122298:-1:exon

XP_041090870.1
type: Protein
SIO_000068: ncbiprotein

position:1121802:-1
position: 1121802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1192440-1192659:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142803-1143174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1140394-1140696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1139721-1139838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136732-1136883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1121802-1122298:-1:exon

nectin1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: nectin1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nectin cell adhesion molecule 1b isoform X2
translation: MKTHSQRKTRRFQDRDMAALILPSFWISLLAVTLSAAQSQVVQVDDSVSGFVDTEVVLSCTFSNTNPNVKITQVTWQKLLNGTKQNVAIANPTMGVSVLPPYKDRVTFRNPAVGYRTPSLEDATIRLSGLRLSDEAAYICEYATFPTGNRENQLNLTVLAKPVIQMTLTSPTIIAQAGQTSKKTVATCVSSNGKPPSVITWETKLKGEPTFQETRNPNGTVTVRSNYLVVPSREIHQQQLTCIVNYQSERTTHSLTLNVLYEPEVTIEGFDGNWYLNRQDVKLTCKSDANPPVTVYQWKLLNGTMPVNVEVLNSTLFFKGPVTSDLAGTYVCEAANVIGTRSGLVEVNVTEFPNIPGGPRIPPDEPSSGPVAVIGCAVGGVILLGLVAVVLFVFLRRRQRTFKGDYNTKKHVFGNGYSKAAGLPHHPPMPQSLQYPDDSDDEKKPAAISGLGVEQDFDPDSEDLKRPYFTVDEGESHEDFDGRTLSFQYDPEPEITDDMVSQNDGSVISKKEWYV
SIO_010081: nectin1b
subclass of: SO_0000673
so part of: nectin1b
location: complement(join(1121802..1122298,1136732..1136883,1139721..1139838,1140394..1140696,1142803..1143174,1192440..1192545))
location: region:1121802-1192545:-1
so has part: feature:1192440-1192545:-1:exon
so has part: feature:1142803-1143174:-1:exon
so has part: feature:1140394-1140696:-1:exon
so has part: feature:1139721-1139838:-1:exon
so has part: feature:1136732-1136883:-1:exon
so has part: feature:1121802-1122298:-1:exon

XP_041090871.1
type: Protein
SIO_000068: ncbiprotein

position:1192545:-1
position: 1192545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1192440-1192545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142803-1143174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1140394-1140696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1139721-1139838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136732-1136883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1121802-1122298:-1:exon

nectin1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: nectin1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nectin cell adhesion molecule 1b isoform X3
translation: MAAQSQVVQVDDSVSGFVDTEVVLSCTFSNTNPNVKITQVTWQKLLNGTKQNVAIANPTMGVSVLPPYKDRVTFRNPAVGYRTPSLEDATIRLSGLRLSDEAAYICEYATFPTGNRENQLNLTVLAKPVIQMTLTSPTIIAQAGQTSKKTVATCVSSNGKPPSVITWETKLKGEPTFQETRNPNGTVTVRSNYLVVPSREIHQQQLTCIVNYQSERTTHSLTLNVLYEPEVTIEGFDGNWYLNRQDVKLTCKSDANPPVTVYQWKLLNGTMPVNVEVLNSTLFFKGPVTSDLAGTYVCEAANVIGTRSGLVEVNVTEFPNIPGGPRIPPDEPSSGPVAVIGCAVGGVILLGLVAVVLFVFLRRRQRTFKGDYNTKKHVFGNGYSKAAGLPHHPPMPQSLQYPDDSDDEKKPAAISGLGVEQDFDPDSEDLKRPYFTVDEGESHEDFDGRTLSFQYDPEPEITDDMVSQNDGSVISKKEWYV
SIO_010081: nectin1b
subclass of: SO_0000673
so part of: nectin1b
location: complement(join(1121802..1122298,1136732..1136883,1139721..1139838,1140394..1140696,1142803..1143174,1161426..1161429))
location: region:1121802-1161429:-1
so has part: feature:1161426-1161429:-1:exon
so has part: feature:1142803-1143174:-1:exon
so has part: feature:1140394-1140696:-1:exon
so has part: feature:1139721-1139838:-1:exon
so has part: feature:1136732-1136883:-1:exon
so has part: feature:1121802-1122298:-1:exon

XP_041090873.1
type: Protein
SIO_000068: ncbiprotein

position:1161429:-1
position: 1161429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1161426-1161429:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142803-1143174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1140394-1140696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1139721-1139838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136732-1136883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1121802-1122298:-1:exon

LOC121304085
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1401254..1406171
location: region:1401254-1406171:1
so has part: feature:1401254-1406171:1:exon
subclass of: SO_0000010

121304085
type: Gene
SIO_000068: ncbigene

position:1401254:1
position: 1401254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1406171:1
position: 1406171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1401254-1406171:1:exon

LOC121304085
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304085
product: thy-1 membrane glycoprotein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_041235055.1
SIO_010081: LOC121304085
subclass of: SO_0000673
so part of: LOC121304085
location: join(1401254..1401397,1403200..1403273,1403688..1404002,1404673..1406171)
location: region:1401254-1406171:1
so has part: feature:1401254-1401397:1:exon
so has part: feature:1403200-1403273:1:exon
so has part: feature:1403688-1404002:1:exon
so has part: feature:1404673-1406171:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1401254-1401397:1:exon

position:1401397:1
position: 1401397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1403200-1403273:1:exon

position:1403200:1
position: 1403200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1403273:1
position: 1403273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1403688-1404002:1:exon

position:1403688:1
position: 1403688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1404002:1
position: 1404002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1404673-1406171:1:exon

position:1404673:1
position: 1404673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121304085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thy-1 membrane glycoprotein-like
translation: MNSLLTLAALLAVLPAIYSQIIACKTEDNKLRIDCTYDALTMSPVNYEFSFSKMGRETIIITNMTSQYDPKNKFSASVKHMPPNSYRMEMANFQLNESTTFACKAKNTNNLNILVEKGKLPTCSAYSLLLHSSPWLLLALLSLQLLQWGGPAFI
SIO_010081: LOC121304085
subclass of: SO_0000673
so part of: LOC121304085
location: join(1403237..1403273,1403688..1404002,1404673..1404785)
location: region:1403237-1404785:1
so has part: feature:1403237-1403273:1:exon
so has part: feature:1403688-1404002:1:exon
so has part: feature:1404673-1404785:1:exon

XP_041090989.1
type: Protein
SIO_000068: ncbiprotein

position:1403237:1
position: 1403237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1404785:1
position: 1404785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1403237-1403273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1403688-1404002:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1404673-1404785:1:exon

LOC121304084
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304084
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1406273..1409011
location: region:1406273-1409011:1
so has part: feature:1406273-1409011:1:exon
subclass of: SO_0000010

121304084
type: Gene
SIO_000068: ncbigene

position:1406273:1
position: 1406273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1409011:1
position: 1409011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1406273-1409011:1:exon

LOC121304084
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304084
product: uncharacterized LOC121304084
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041235054.1
SIO_010081: LOC121304084
subclass of: SO_0000673
so part of: LOC121304084
location: join(1406273..1406786,1408130..1409011)
location: region:1406273-1409011:1
so has part: feature:1406273-1406786:1:exon
so has part: feature:1408130-1409011:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1406273-1406786:1:exon

position:1406786:1
position: 1406786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1408130-1409011:1:exon

position:1408130:1
position: 1408130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121304084
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304084
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121304084
translation: MSIQFCGWEACLDGRKHLKPGQQPERGHGYTMYHGTHKDSARTIITSGFRPSAGGTLGQGVYCSRAIQKAMGYPGNCSPNDRVVLLLKVRVGKVKKIDAQNWNLATTWHQSGYDTAWIPPAGGLEEDCVWDPSRLTVVGIAHCTDPVTKSDLEKLIKQHSKIQARADKGTQGNCKVCGKDGGASHSVSKCWGCAKRICPFMVKHVCKKQDRESVP
SIO_010081: LOC121304084
subclass of: SO_0000673
so part of: LOC121304084
location: 1408142..1408789
location: region:1408142-1408789:1
so has part: feature:1408142-1408789:1:exon

XP_041090988.1
type: Protein
SIO_000068: ncbiprotein

position:1408142:1
position: 1408142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1408789:1
position: 1408789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1408142-1408789:1:exon

LOC121303952
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1411822..1422263)
location: region:1411822-1422263:-1
so has part: feature:1411822-1422263:-1:exon
subclass of: SO_0000010

121303952
type: Gene
SIO_000068: ncbigene

position:1411822:-1
position: 1411822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422263:-1
position: 1422263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1411822-1422263:-1:exon

LOC121303952
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303952
product: uncharacterized LOC121303952
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041234853.1
SIO_010081: LOC121303952
subclass of: SO_0000673
so part of: LOC121303952
location: complement(join(1411822..1412582,1413802..1413808,1414920..1415420,1418006..1418151,1419689..1420974,1422166..1422263))
location: region:1411822-1422263:-1
so has part: feature:1422166-1422263:-1:exon
so has part: feature:1419689-1420974:-1:exon
so has part: feature:1418006-1418151:-1:exon
so has part: feature:1414920-1415420:-1:exon
so has part: feature:1413802-1413808:-1:exon
so has part: feature:1411822-1412582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1422166-1422263:-1:exon

position:1422166:-1
position: 1422166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1419689-1420974:-1:exon

position:1419689:-1
position: 1419689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1420974:-1
position: 1420974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1418006-1418151:-1:exon

position:1418006:-1
position: 1418006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1418151:-1
position: 1418151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1414920-1415420:-1:exon

position:1414920:-1
position: 1414920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415420:-1
position: 1415420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1413802-1413808:-1:exon

position:1413802:-1
position: 1413802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1413808:-1
position: 1413808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1411822-1412582:-1:exon

position:1412582:-1
position: 1412582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121303952
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121303952
translation: MVSFTFTNKDTQRSSTKFELGFKMSRWEEEDSSWLSDDSCTGEENDCCTGEDSESCAEESNDGSSGEENDSCTRVETECCAEEENQSSSGKGTESCTEEDHESCTEEDNESCTEEDNESCTEEDNESCTDEDRQSCTEEDSESCTDEDHQSCTEEDSESCTEEDSESCTDEDRQSCTEEDNESCTEEDSESCTEEDSESCTDEDRQSCTEEDNESCTDEDRQSCTEEDSESCTEEDSESCTDEDSQSSTEEDSESCNEEVTESHSSVDDPSLRSNRNPVHKTPYVMYHGTTRKAALSIIKKGFRPSADGMLGQGVYISRDFKKASRYPHGTPERKNAVLKLRVNVGRVKKIDRQGHPMQKTWHDHGYDSAWVPPNCGMVPSGLEEDCIWDPKRITVTEVILPEKYMHRTYCCVRMSDLELQYKPKGYEFLLPHTERCSRWLIQRHGFKQYGGGMLGRGGFMSAETLTSRYPLDYPEEEKRVLKLRVSVDHSTARFEAIPLLSCKMSMWAEEDSPYFVEACLQSYAEPQEGKLYTMYHGTTKEAAESIKRCGFRQSDERGMLGRGVYVSRDFNKASRYPLDCPDKDKRVLKLRVNVGRVKKIDRQGHPMQKTWHAHGYDSAWVPPNCGMVSSGLEEDCIWDPKRIKVMEVIKPKNENSLYAQPLEGKLYTMYHGTTKEDAESIKRYGFTQSDDGMLGRGVYVSRDFNKASRYPLNYPDKDKRVLKLRVNVGRVKKIDRQGHRMQKSWHAHGYDSAWVPPNCRMVASGLEEDCIWDPDRITVVEVIKPKNQGSAQYPRFGYSV
SIO_010081: LOC121303952
subclass of: SO_0000673
so part of: LOC121303952
location: complement(join(1412150..1412582,1413802..1413808,1414920..1415420,1418006..1418151,1419689..1420974,1422166..1422198))
location: region:1412150-1422198:-1
so has part: feature:1422166-1422198:-1:exon
so has part: feature:1419689-1420974:-1:exon
so has part: feature:1418006-1418151:-1:exon
so has part: feature:1414920-1415420:-1:exon
so has part: feature:1413802-1413808:-1:exon
so has part: feature:1412150-1412582:-1:exon

XP_041090787.1
type: Protein
SIO_000068: ncbiprotein

position:1412150:-1
position: 1412150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422198:-1
position: 1422198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1422166-1422198:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1419689-1420974:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1418006-1418151:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1414920-1415420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1413802-1413808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1412150-1412582:-1:exon

bud13
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: bud13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1423047..1431403
location: region:1423047-1431403:1
so has part: feature:1423047-1431403:1:exon
subclass of: SO_0000010

121304041
type: Gene
SIO_000068: ncbigene

position:1423047:1
position: 1423047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431403:1
position: 1431403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1423047-1431403:1:exon

bud13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: bud13
product: BUD13 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041234993.1
SIO_010081: bud13
subclass of: SO_0000673
so part of: bud13
location: join(1423047..1423228,1424199..1424295,1424383..1424467,1424799..1424856,1424991..1425517,1426644..1427002,1427793..1427901,1428376..1428514,1429486..1429676,1429968..1430049,1430264..1431403)
location: region:1423047-1431403:1
so has part: feature:1423047-1423228:1:exon
so has part: feature:1424199-1424295:1:exon
so has part: feature:1424383-1424467:1:exon
so has part: feature:1424799-1424856:1:exon
so has part: feature:1424991-1425517:1:exon
so has part: feature:1426644-1427002:1:exon
so has part: feature:1427793-1427901:1:exon
so has part: feature:1428376-1428514:1:exon
so has part: feature:1429486-1429676:1:exon
so has part: feature:1429968-1430049:1:exon
so has part: feature:1430264-1431403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1423047-1423228:1:exon

position:1423228:1
position: 1423228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1424199-1424295:1:exon

position:1424199:1
position: 1424199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1424295:1
position: 1424295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1424383-1424467:1:exon

position:1424383:1
position: 1424383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1424467:1
position: 1424467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1424799-1424856:1:exon

position:1424799:1
position: 1424799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1424856:1
position: 1424856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1424991-1425517:1:exon

position:1424991:1
position: 1424991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425517:1
position: 1425517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1426644-1427002:1:exon

position:1426644:1
position: 1426644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427002:1
position: 1427002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1427793-1427901:1:exon

position:1427793:1
position: 1427793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427901:1
position: 1427901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1428376-1428514:1:exon

position:1428376:1
position: 1428376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428514:1
position: 1428514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1429486-1429676:1:exon

position:1429486:1
position: 1429486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429676:1
position: 1429676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1429968-1430049:1:exon

position:1429968:1
position: 1429968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430049:1
position: 1430049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1430264-1431403:1:exon

position:1430264:1
position: 1430264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

bud13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: bud13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BUD13 homolog
translation: MAASSPVRATATLSKAEYLKRYLSGDAESKKTREKKLRKKRPKPSGKGMRIVDDDVDWKQFIQSEEKDKQDEEEEEEAPVVAEVIDERPDEVKRLEEFTNSNKWKTVGDRNEDSQDSEHSHVSHLTASSGAASQKRTEDVSRRGRHDSPDLSASRKGRHDSPDLSASRKGRHDSPDLSPARKGRHDSPDLSASRKGRHDSPDLSPARKGRHDSPDLSPARKGRHDSPDLSPARKGRHDSPDLSAPRRKPASAAEKSRRRRDSPSSSPSRRRRHDSSDLSPPRNSRQDSDSDLSPPRKKQSVKRDASPHRRKHKAVPSTQQRHDSDSDVSPPRRKARGSDSDLSPQRRRPQQGGRRGSDSDLSPPRRRPQQGGRRGSDSDLSPPRRRPQQGGRRGSDSDLSPPRRNARTSSDMSPPRRGNGVQGANQMLSGGAAGLVSVEVLRKEHEENRKRERQNKPLEEASRNAQTVFRDKSGKKRDIELERIEKQKAAGEKAEKDEKYAQWGKGLVQGGMQQRNVEDAVLEAQKPLARHIDDEDLDKLLREQERDGDPMAGLLRKKKEKEGQKKGVKERPRYKGPAPPPNRFNIMPGYRWDGVNRSNGFEKQRYSRMADKKAGQEVAYKWSVEDM
SIO_010081: bud13
subclass of: SO_0000673
so part of: bud13
location: join(1423086..1423228,1424199..1424295,1424383..1424467,1424799..1424856,1424991..1425517,1426644..1427002,1427793..1427901,1428376..1428514,1429486..1429676,1429968..1430049,1430264..1430357)
location: region:1423086-1430357:1
so has part: feature:1423086-1423228:1:exon
so has part: feature:1424199-1424295:1:exon
so has part: feature:1424383-1424467:1:exon
so has part: feature:1424799-1424856:1:exon
so has part: feature:1424991-1425517:1:exon
so has part: feature:1426644-1427002:1:exon
so has part: feature:1427793-1427901:1:exon
so has part: feature:1428376-1428514:1:exon
so has part: feature:1429486-1429676:1:exon
so has part: feature:1429968-1430049:1:exon
so has part: feature:1430264-1430357:1:exon

XP_041090927.1
type: Protein
SIO_000068: ncbiprotein

position:1423086:1
position: 1423086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430357:1
position: 1430357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1423086-1423228:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1424199-1424295:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1424383-1424467:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1424799-1424856:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1424991-1425517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1426644-1427002:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427793-1427901:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1428376-1428514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1429486-1429676:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1429968-1430049:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1430264-1430357:1:exon

si:dkeyp-69c1.9
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: si:dkeyp-69c1.9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1431552..1435347)
location: region:1431552-1435347:-1
so has part: feature:1431552-1435347:-1:exon
subclass of: SO_0000010

121304042
type: Gene
SIO_000068: ncbigene

position:1431552:-1
position: 1431552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1435347:-1
position: 1435347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1431552-1435347:-1:exon

si:dkeyp-69c1.9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: si:dkeyp-69c1.9
product: uncharacterized si:dkeyp-69c1.9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041234994.1
SIO_010081: si:dkeyp-69c1.9
subclass of: SO_0000673
so part of: si:dkeyp-69c1.9
location: complement(join(1431552..1431819,1432230..1432372,1432757..1432945,1433317..1433458,1433983..1434214,1434437..1434559,1435060..1435347))
location: region:1431552-1435347:-1
so has part: feature:1435060-1435347:-1:exon
so has part: feature:1434437-1434559:-1:exon
so has part: feature:1433983-1434214:-1:exon
so has part: feature:1433317-1433458:-1:exon
so has part: feature:1432757-1432945:-1:exon
so has part: feature:1432230-1432372:-1:exon
so has part: feature:1431552-1431819:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1435060-1435347:-1:exon

position:1435060:-1
position: 1435060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1434437-1434559:-1:exon

position:1434437:-1
position: 1434437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1434559:-1
position: 1434559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1433983-1434214:-1:exon

position:1433983:-1
position: 1433983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1434214:-1
position: 1434214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1433317-1433458:-1:exon

position:1433317:-1
position: 1433317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1433458:-1
position: 1433458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1432757-1432945:-1:exon

position:1432757:-1
position: 1432757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1432945:-1
position: 1432945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1432230-1432372:-1:exon

position:1432230:-1
position: 1432230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1432372:-1
position: 1432372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1431552-1431819:-1:exon

position:1431819:-1
position: 1431819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

si:dkeyp-69c1.9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: si:dkeyp-69c1.9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein si:dkeyp-69c1.9
translation: MVCPPLLQKEQYQPPQEPFLGQTVYSLDFPAKQPEALVMQRPKSTMQRAGGAAAKISSTTTARESYQGRRGAPQLRFGELPAIVGSLLYPDQKEEMRTTTQREFIQKAGAKPELIRAVQCNLKIEGERDMKTTHQTVFQPLPLEKALAVPRPRLSEREAALRGAHMESVTKYRSDYPAHHSLLERRELALPPADNLAINHSLRGDFKTVQRETFPGWDTSKYKRPDPAHFKEELSDREREAHFQGDTVTKLAYQPIPLNTLQLEPIKRPATVLKPHNARFEDTTANRLFFQDWGVQPRLRYGDPYDGSCIQPLGRFETETTNRSTFNQKEAEMVTNCKPEHKPIEAVGEHDFTTVHQETYRPPKLPVCRLQAYLSQQQQLKENMPSPPAVPS
SIO_010081: si:dkeyp-69c1.9
subclass of: SO_0000673
so part of: si:dkeyp-69c1.9
location: complement(join(1431723..1431819,1432230..1432372,1432757..1432945,1433317..1433458,1433983..1434214,1434437..1434559,1435060..1435312))
location: region:1431723-1435312:-1
so has part: feature:1435060-1435312:-1:exon
so has part: feature:1434437-1434559:-1:exon
so has part: feature:1433983-1434214:-1:exon
so has part: feature:1433317-1433458:-1:exon
so has part: feature:1432757-1432945:-1:exon
so has part: feature:1432230-1432372:-1:exon
so has part: feature:1431723-1431819:-1:exon

XP_041090928.1
type: Protein
SIO_000068: ncbiprotein

position:1431723:-1
position: 1431723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1435312:-1
position: 1435312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1435060-1435312:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434437-1434559:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1433983-1434214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1433317-1433458:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1432757-1432945:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1432230-1432372:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1431723-1431819:-1:exon

ets1
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: ets1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1466144..1498312
location: region:1466144-1498312:1
so has part: feature:1466144-1498312:1:exon
subclass of: SO_0000010

121304068
type: Gene
SIO_000068: ncbigene

position:1466144:1
position: 1466144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498312:1
position: 1498312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1466144-1498312:1:exon

ets1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: ets1
product: v-ets avian erythroblastosis virus E26 oncogene homolog 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041235037.1
SIO_010081: ets1
subclass of: SO_0000673
so part of: ets1
location: join(1466144..1466296,1485944..1486063,1487046..1487246,1487517..1487594,1488033..1488278,1489347..1489607,1494423..1494541,1495522..1498312)
location: region:1466144-1498312:1
so has part: feature:1466144-1466296:1:exon
so has part: feature:1485944-1486063:1:exon
so has part: feature:1487046-1487246:1:exon
so has part: feature:1487517-1487594:1:exon
so has part: feature:1488033-1488278:1:exon
so has part: feature:1489347-1489607:1:exon
so has part: feature:1494423-1494541:1:exon
so has part: feature:1495522-1498312:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1466144-1466296:1:exon

position:1466296:1
position: 1466296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1485944-1486063:1:exon

position:1485944:1
position: 1485944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1486063:1
position: 1486063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1487046-1487246:1:exon

position:1487046:1
position: 1487046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1487246:1
position: 1487246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1487517-1487594:1:exon

position:1487517:1
position: 1487517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1487594:1
position: 1487594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1488033-1488278:1:exon

position:1488033:1
position: 1488033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1488278:1
position: 1488278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1489347-1489607:1:exon

position:1489347:1
position: 1489347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1489607:1
position: 1489607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1494423-1494541:1:exon

position:1494423:1
position: 1494423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1494541:1
position: 1494541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1495522-1498312:1:exon

position:1495522:1
position: 1495522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ets1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: ets1
product: v-ets avian erythroblastosis virus E26 oncogene homolog 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041235038.1
SIO_010081: ets1
subclass of: SO_0000673
so part of: ets1
location: join(1466144..1466296,1485944..1486063,1487046..1487246,1487520..1487594,1488033..1488278,1489347..1489607,1494423..1494541,1495522..1498312)
location: region:1466144-1498312:1
so has part: feature:1466144-1466296:1:exon
so has part: feature:1485944-1486063:1:exon
so has part: feature:1487046-1487246:1:exon
so has part: feature:1487520-1487594:1:exon
so has part: feature:1488033-1488278:1:exon
so has part: feature:1489347-1489607:1:exon
so has part: feature:1494423-1494541:1:exon
so has part: feature:1495522-1498312:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1466144-1466296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1485944-1486063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1487046-1487246:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1487520-1487594:1:exon

position:1487520:1
position: 1487520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1488033-1488278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1489347-1489607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1494423-1494541:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1495522-1498312:1:exon

ets1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: ets1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X1
translation: MGYPPQPYYQPRPAYPTRGEVSAQEVPTGHEYWASELECGDVPLLTPGSKEMMSQALKATFSGFTKEQQRLGIPKDPHQWTQSHVAEWLTWTANEFSLKNLEFHRFCMNGTMLCALGKERFLELAPDFVGDILWEHLEMLQKEDAKHFPVSGLSSTFPESRYTSEYFASYGIEHAQCVPPSEYSEPGFITESYQTLHPISSEELLSLKYESDYPSVILRDAPLNPLQGDYFSVKQEVISPDNMCVGRISRGKLAGQDSLESIESFDSCDHLTQSWSSQSSFSSLQRVPSYDSFDSEDYPSGMHGHKPKGTFKDYVRERADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTSGKRYVYRFVCDLKSLLGYTPEELHAMLDVKPDADE
SIO_010081: ets1
subclass of: SO_0000673
so part of: ets1
location: join(1466191..1466296,1485944..1486063,1487046..1487246,1487517..1487594,1488033..1488278,1489347..1489607,1494423..1494541,1495522..1495737)
location: region:1466191-1495737:1
so has part: feature:1466191-1466296:1:exon
so has part: feature:1485944-1486063:1:exon
so has part: feature:1487046-1487246:1:exon
so has part: feature:1487517-1487594:1:exon
so has part: feature:1488033-1488278:1:exon
so has part: feature:1489347-1489607:1:exon
so has part: feature:1494423-1494541:1:exon
so has part: feature:1495522-1495737:1:exon

XP_041090971.1
type: Protein
SIO_000068: ncbiprotein

position:1466191:1
position: 1466191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1495737:1
position: 1495737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1466191-1466296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1485944-1486063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1487046-1487246:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1487517-1487594:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1488033-1488278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1489347-1489607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1494423-1494541:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1495522-1495737:1:exon

ets1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: ets1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X2
translation: MGYPPQPYYQPRPAYPTRGEVSAQEVPTGHEYWASELECGDVPLLTPGSKEMMSQALKATFSGFTKEQQRLGIPKDPHQWTQSHVAEWLTWTANEFSLKNLEFHRFCMNGTMLCALGKERFLELAPDFVGDILWEHLEMLQKDAKHFPVSGLSSTFPESRYTSEYFASYGIEHAQCVPPSEYSEPGFITESYQTLHPISSEELLSLKYESDYPSVILRDAPLNPLQGDYFSVKQEVISPDNMCVGRISRGKLAGQDSLESIESFDSCDHLTQSWSSQSSFSSLQRVPSYDSFDSEDYPSGMHGHKPKGTFKDYVRERADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTSGKRYVYRFVCDLKSLLGYTPEELHAMLDVKPDADE
SIO_010081: ets1
subclass of: SO_0000673
so part of: ets1
location: join(1466191..1466296,1485944..1486063,1487046..1487246,1487520..1487594,1488033..1488278,1489347..1489607,1494423..1494541,1495522..1495737)
location: region:1466191-1495737:1
so has part: feature:1466191-1466296:1:exon
so has part: feature:1485944-1486063:1:exon
so has part: feature:1487046-1487246:1:exon
so has part: feature:1487520-1487594:1:exon
so has part: feature:1488033-1488278:1:exon
so has part: feature:1489347-1489607:1:exon
so has part: feature:1494423-1494541:1:exon
so has part: feature:1495522-1495737:1:exon

XP_041090972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1466191-1466296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1485944-1486063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1487046-1487246:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1487520-1487594:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1488033-1488278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1489347-1489607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1494423-1494541:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1495522-1495737:1:exon

ets1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: ets1
product: v-ets avian erythroblastosis virus E26 oncogene homolog 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041235039.1
SIO_010081: ets1
subclass of: SO_0000673
so part of: ets1
location: join(1473832..1474208,1485944..1486063,1487046..1487246,1487517..1487594,1488033..1488278,1489347..1489607,1494423..1494541,1495522..1498312)
location: region:1473832-1498312:1
so has part: feature:1473832-1474208:1:exon
so has part: feature:1485944-1486063:1:exon
so has part: feature:1487046-1487246:1:exon
so has part: feature:1487517-1487594:1:exon
so has part: feature:1488033-1488278:1:exon
so has part: feature:1489347-1489607:1:exon
so has part: feature:1494423-1494541:1:exon
so has part: feature:1495522-1498312:1:exon

position:1473832:1
position: 1473832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1473832-1474208:1:exon

position:1474208:1
position: 1474208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1485944-1486063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1487046-1487246:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1487517-1487594:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1488033-1488278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1489347-1489607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1494423-1494541:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1495522-1498312:1:exon

ets1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: ets1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X3
translation: MTAAVDMKPTLMIIKTEKAEELECGDVPLLTPGSKEMMSQALKATFSGFTKEQQRLGIPKDPHQWTQSHVAEWLTWTANEFSLKNLEFHRFCMNGTMLCALGKERFLELAPDFVGDILWEHLEMLQKEDAKHFPVSGLSSTFPESRYTSEYFASYGIEHAQCVPPSEYSEPGFITESYQTLHPISSEELLSLKYESDYPSVILRDAPLNPLQGDYFSVKQEVISPDNMCVGRISRGKLAGQDSLESIESFDSCDHLTQSWSSQSSFSSLQRVPSYDSFDSEDYPSGMHGHKPKGTFKDYVRERADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTSGKRYVYRFVCDLKSLLGYTPEELHAMLDVKPDADE
SIO_010081: ets1
subclass of: SO_0000673
so part of: ets1
location: join(1474148..1474208,1485944..1486063,1487046..1487246,1487517..1487594,1488033..1488278,1489347..1489607,1494423..1494541,1495522..1495737)
location: region:1474148-1495737:1
so has part: feature:1474148-1474208:1:exon
so has part: feature:1485944-1486063:1:exon
so has part: feature:1487046-1487246:1:exon
so has part: feature:1487517-1487594:1:exon
so has part: feature:1488033-1488278:1:exon
so has part: feature:1489347-1489607:1:exon
so has part: feature:1494423-1494541:1:exon
so has part: feature:1495522-1495737:1:exon

XP_041090973.1
type: Protein
SIO_000068: ncbiprotein

position:1474148:1
position: 1474148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1474148-1474208:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1485944-1486063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1487046-1487246:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1487517-1487594:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1488033-1488278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1489347-1489607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1494423-1494541:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1495522-1495737:1:exon

LOC121303953
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303953
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1598475..1630345
location: region:1598475-1630345:1
so has part: feature:1598475-1630345:1:exon
subclass of: SO_0000010

121303953
type: Gene
SIO_000068: ncbigene

position:1598475:1
position: 1598475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1630345:1
position: 1630345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1598475-1630345:1:exon

LOC121303953
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303953
product: kin of IRRE-like protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041234854.1
SIO_010081: LOC121303953
subclass of: SO_0000673
so part of: LOC121303953
location: join(1598475..1598538,1599994..1600143,1605950..1606099,1616027..1616184,1619321..1619471,1629660..1629757,1630265..1630345)
location: region:1598475-1630345:1
so has part: feature:1598475-1598538:1:exon
so has part: feature:1599994-1600143:1:exon
so has part: feature:1605950-1606099:1:exon
so has part: feature:1616027-1616184:1:exon
so has part: feature:1619321-1619471:1:exon
so has part: feature:1629660-1629757:1:exon
so has part: feature:1630265-1630345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1598475-1598538:1:exon

position:1598538:1
position: 1598538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1599994-1600143:1:exon

position:1599994:1
position: 1599994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1600143:1
position: 1600143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1605950-1606099:1:exon

position:1605950:1
position: 1605950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1606099:1
position: 1606099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1616027-1616184:1:exon

position:1616027:1
position: 1616027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1616184:1
position: 1616184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1619321-1619471:1:exon

position:1619321:1
position: 1619321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1619471:1
position: 1619471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1629660-1629757:1:exon

position:1629660:1
position: 1629660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1629757:1
position: 1629757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1630265-1630345:1:exon

position:1630265:1
position: 1630265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121303953
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303953
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kin of IRRE-like protein 3
translation: MQREIVYAAACVESLSSLLTLCVLTMFAQQPQDLVVVAGQPVTLPCAIPGYHGIVLWIKDGLALGVGRDLSGYPRYSVVGDHSAGEHHLKIQRVELMDDAIYECQAIQAAMRSRPARLTVLVPPDDPVINGGPIVSLRAGDPLNLTCRANNAKPAATIIWIRNGEVLNGAMYSKTLLRDGRRESAVSTLYISASNIESGQQIICRASNKAVPNGKETSATVDIQHDLAERLRTSLILQRRGNSPRLTMSDKAQRKQYALPRPFPGDGYTGQLELRSVAALRDP
SIO_010081: LOC121303953
subclass of: SO_0000673
so part of: LOC121303953
location: join(1598475..1598538,1599994..1600143,1605950..1606099,1616027..1616184,1619321..1619471,1629660..1629757,1630265..1630345)
location: region:1598475-1630345:1
so has part: feature:1598475-1598538:1:exon
so has part: feature:1599994-1600143:1:exon
so has part: feature:1605950-1606099:1:exon
so has part: feature:1616027-1616184:1:exon
so has part: feature:1619321-1619471:1:exon
so has part: feature:1629660-1629757:1:exon
so has part: feature:1630265-1630345:1:exon

XP_041090788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1598475-1598538:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1599994-1600143:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1605950-1606099:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1616027-1616184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1619321-1619471:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1629660-1629757:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1630265-1630345:1:exon

smtla
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: smtla
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1676811..1679556)
location: region:1676811-1679556:-1
so has part: feature:1676811-1679556:-1:exon
subclass of: SO_0000010

121304062
type: Gene
SIO_000068: ncbigene

position:1676811:-1
position: 1676811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1679556:-1
position: 1679556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1676811-1679556:-1:exon

smtla
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: smtla
product: somatolactin alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041235030.1
SIO_010081: smtla
subclass of: SO_0000673
so part of: smtla
location: complement(join(1676811..1677373,1677650..1677829,1678207..1678320,1678617..1678807,1679492..1679556))
location: region:1676811-1679556:-1
so has part: feature:1679492-1679556:-1:exon
so has part: feature:1678617-1678807:-1:exon
so has part: feature:1678207-1678320:-1:exon
so has part: feature:1677650-1677829:-1:exon
so has part: feature:1676811-1677373:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1679492-1679556:-1:exon

position:1679492:-1
position: 1679492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1678617-1678807:-1:exon

position:1678617:-1
position: 1678617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1678807:-1
position: 1678807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1678207-1678320:-1:exon

position:1678207:-1
position: 1678207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1678320:-1
position: 1678320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1677650-1677829:-1:exon

position:1677650:-1
position: 1677650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1677829:-1
position: 1677829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1676811-1677373:-1:exon

position:1677373:-1
position: 1677373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

smtla
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: smtla
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: somatolactin alpha
translation: MPKVKVLQVCAWVLLLWQCWGALGYPLDCKEEQGSSISCTSISLEKLLDRVIQHAELIYHVSEESCTLFEEMFVPLPMRTQQNRASNTCITKAFPIPGSKSEIQKISDKWLLHSVLMLAQSWIEPLVYLQKTLDRYDDAPDTLLNKTKWVTNKLSSLEQGVVVLIRKMLDEGLLEFEHQQTLTRFDMQPEVVESILRDYAVLTCFKKDAHKMEVFLKLLKCRHTEKMSCYIS
SIO_010081: smtla
subclass of: SO_0000673
so part of: smtla
location: complement(join(1677176..1677373,1677650..1677829,1678207..1678320,1678617..1678807,1679492..1679507))
location: region:1677176-1679507:-1
so has part: feature:1679492-1679507:-1:exon
so has part: feature:1678617-1678807:-1:exon
so has part: feature:1678207-1678320:-1:exon
so has part: feature:1677650-1677829:-1:exon
so has part: feature:1677176-1677373:-1:exon

XP_041090964.1
type: Protein
SIO_000068: ncbiprotein

position:1677176:-1
position: 1677176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1679507:-1
position: 1679507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1679492-1679507:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1678617-1678807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1678207-1678320:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1677650-1677829:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1677176-1677373:-1:exon

LOC121303954
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1921379..1926115)
location: region:1921379-1926115:-1
so has part: feature:1921379-1926115:-1:exon
subclass of: SO_0000010

121303954
type: Gene
SIO_000068: ncbigene

position:1921379:-1
position: 1921379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1926115:-1
position: 1926115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1921379-1926115:-1:exon

LOC121303954
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303954
product: opioid-binding protein/cell adhesion molecule homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041234856.1
SIO_010081: LOC121303954
subclass of: SO_0000673
so part of: LOC121303954
location: complement(join(1921379..1921712,1923430..1923581,1924566..1924686,1925471..1925605,1926088..1926115))
location: region:1921379-1926115:-1
so has part: feature:1926088-1926115:-1:exon
so has part: feature:1925471-1925605:-1:exon
so has part: feature:1924566-1924686:-1:exon
so has part: feature:1923430-1923581:-1:exon
so has part: feature:1921379-1921712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1926088-1926115:-1:exon

position:1926088:-1
position: 1926088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1925471-1925605:-1:exon

position:1925471:-1
position: 1925471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1925605:-1
position: 1925605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1924566-1924686:-1:exon

position:1924566:-1
position: 1924566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1924686:-1
position: 1924686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1923430-1923581:-1:exon

position:1923430:-1
position: 1923430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1923581:-1
position: 1923581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1921379-1921712:-1:exon

position:1921712:-1
position: 1921712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121303954
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: opioid-binding protein/cell adhesion molecule homolog
translation: MSGDDFVFYTHRFVSEGEYLEITEISKEQSGVYECSASNDVSTPDVRKVHVTVNYPPFISNPRNTGAPIGQKGILQCEASAVPFAVFEWYKEDRRLLNGLNGVRIENKGKQSMLTFFNVSEQDYGNYTCVAINKLGNSNASIILYGPGAVHDRNNAAFATHSSFCLLLTLVLQYVLKF
SIO_010081: LOC121303954
subclass of: SO_0000673
so part of: LOC121303954
location: complement(join(1921612..1921712,1923430..1923581,1924566..1924686,1925471..1925605,1926088..1926115))
location: region:1921612-1926115:-1
so has part: feature:1926088-1926115:-1:exon
so has part: feature:1925471-1925605:-1:exon
so has part: feature:1924566-1924686:-1:exon
so has part: feature:1923430-1923581:-1:exon
so has part: feature:1921612-1921712:-1:exon

XP_041090790.1
type: Protein
SIO_000068: ncbiprotein

position:1921612:-1
position: 1921612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1926088-1926115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1925471-1925605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1924566-1924686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1923430-1923581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1921612-1921712:-1:exon

LOC121303937
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2022357..2024186
location: region:2022357-2024186:1
so has part: feature:2022357-2024186:1:exon
subclass of: SO_0000010

121303937
type: Gene
SIO_000068: ncbigene

position:2022357:1
position: 2022357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2024186:1
position: 2024186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2022357-2024186:1:exon

LOC121303937
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303937
product: autotransporter adhesin BpaC-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041234838.1
SIO_010081: LOC121303937
subclass of: SO_0000673
so part of: LOC121303937
location: join(2022357..2022481,2022849..2024186)
location: region:2022357-2024186:1
so has part: feature:2022357-2022481:1:exon
so has part: feature:2022849-2024186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2022357-2022481:1:exon

position:2022481:1
position: 2022481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2022849-2024186:1:exon

position:2022849:1
position: 2022849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121303937
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autotransporter adhesin BpaC-like
translation: MLPFTSMIALCVLVLALPVYIEGADAGNATSNETNSTTDATKSNSTSPGANSTSTFPSSNTNVSVNSSVSGTNGTASGSSPSQNSTSTTATSTNSPGNATNSNPTGIPSALPGTNSTANPLNATPLYLSAKASTSCSLSYSLTLAQMILTFLVSVNKLMA
SIO_010081: LOC121303937
subclass of: SO_0000673
so part of: LOC121303937
location: join(2022412..2022481,2022849..2023261)
location: region:2022412-2023261:1
so has part: feature:2022412-2022481:1:exon
so has part: feature:2022849-2023261:1:exon

XP_041090772.1
type: Protein
SIO_000068: ncbiprotein

position:2022412:1
position: 2022412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2023261:1
position: 2023261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2022412-2022481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2022849-2023261:1:exon

ntm
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: ntm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2452806..2641202)
location: region:2452806-2641202:-1
so has part: feature:2452806-2641202:-1:exon
subclass of: SO_0000010

121303928
type: Gene
SIO_000068: ncbigene

position:2452806:-1
position: 2452806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2641202:-1
position: 2641202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2452806-2641202:-1:exon

ntm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: ntm
product: neurotrimin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_041234795.1
SIO_010081: ntm
subclass of: SO_0000673
so part of: ntm
location: complement(join(2452806..2454909,2456640..2456675,2462253..2462288,2463141..2463292,2464082..2464202,2464651..2464782,2488224..2488349,2503545..2503777,2550343..2550430,2640778..2641202))
location: region:2452806-2641202:-1
so has part: feature:2640778-2641202:-1:exon
so has part: feature:2550343-2550430:-1:exon
so has part: feature:2503545-2503777:-1:exon
so has part: feature:2488224-2488349:-1:exon
so has part: feature:2464651-2464782:-1:exon
so has part: feature:2464082-2464202:-1:exon
so has part: feature:2463141-2463292:-1:exon
so has part: feature:2462253-2462288:-1:exon
so has part: feature:2456640-2456675:-1:exon
so has part: feature:2452806-2454909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2640778-2641202:-1:exon

position:2640778:-1
position: 2640778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2550343-2550430:-1:exon

position:2550343:-1
position: 2550343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2550430:-1
position: 2550430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2503545-2503777:-1:exon

position:2503545:-1
position: 2503545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2503777:-1
position: 2503777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2488224-2488349:-1:exon

position:2488224:-1
position: 2488224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2488349:-1
position: 2488349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2464651-2464782:-1:exon

position:2464651:-1
position: 2464651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2464782:-1
position: 2464782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2464082-2464202:-1:exon

position:2464082:-1
position: 2464082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2464202:-1
position: 2464202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2463141-2463292:-1:exon

position:2463141:-1
position: 2463141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2463292:-1
position: 2463292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2462253-2462288:-1:exon

position:2462253:-1
position: 2462253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2462288:-1
position: 2462288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2456640-2456675:-1:exon

position:2456640:-1
position: 2456640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2456675:-1
position: 2456675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2452806-2454909:-1:exon

position:2454909:-1
position: 2454909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ntm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: ntm
product: neurotrimin, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041234797.1
SIO_010081: ntm
subclass of: SO_0000673
so part of: ntm
location: complement(join(2452806..2454909,2456640..2456675,2463141..2463292,2464082..2464202,2464651..2464782,2488224..2488349,2503545..2503777,2550343..2550551))
location: region:2452806-2550551:-1
so has part: feature:2550343-2550551:-1:exon
so has part: feature:2503545-2503777:-1:exon
so has part: feature:2488224-2488349:-1:exon
so has part: feature:2464651-2464782:-1:exon
so has part: feature:2464082-2464202:-1:exon
so has part: feature:2463141-2463292:-1:exon
so has part: feature:2456640-2456675:-1:exon
so has part: feature:2452806-2454909:-1:exon

position:2550551:-1
position: 2550551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550343-2550551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2503545-2503777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2488224-2488349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2464651-2464782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2464082-2464202:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2463141-2463292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2456640-2456675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2452806-2454909:-1:exon

ntm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: ntm
product: neurotrimin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_041234794.1
SIO_010081: ntm
subclass of: SO_0000673
so part of: ntm
location: complement(join(2452806..2454909,2456640..2456675,2462253..2462288,2463141..2463292,2464082..2464202,2464651..2464782,2488224..2488349,2503545..2503777,2550343..2550551))
location: region:2452806-2550551:-1
so has part: feature:2550343-2550551:-1:exon
so has part: feature:2503545-2503777:-1:exon
so has part: feature:2488224-2488349:-1:exon
so has part: feature:2464651-2464782:-1:exon
so has part: feature:2464082-2464202:-1:exon
so has part: feature:2463141-2463292:-1:exon
so has part: feature:2462253-2462288:-1:exon
so has part: feature:2456640-2456675:-1:exon
so has part: feature:2452806-2454909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2550343-2550551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2503545-2503777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2488224-2488349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2464651-2464782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2464082-2464202:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2463141-2463292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2462253-2462288:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2456640-2456675:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2452806-2454909:-1:exon

ntm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: ntm
product: neurotrimin, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_041234798.1
SIO_010081: ntm
subclass of: SO_0000673
so part of: ntm
location: complement(join(2452806..2454909,2463141..2463292,2464082..2464202,2464651..2464782,2488224..2488349,2503545..2503777,2550343..2550550))
location: region:2452806-2550550:-1
so has part: feature:2550343-2550550:-1:exon
so has part: feature:2503545-2503777:-1:exon
so has part: feature:2488224-2488349:-1:exon
so has part: feature:2464651-2464782:-1:exon
so has part: feature:2464082-2464202:-1:exon
so has part: feature:2463141-2463292:-1:exon
so has part: feature:2452806-2454909:-1:exon

position:2550550:-1
position: 2550550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550343-2550550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2503545-2503777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2488224-2488349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2464651-2464782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2464082-2464202:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2463141-2463292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2452806-2454909:-1:exon

ntm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: ntm
product: neurotrimin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041234796.1
SIO_010081: ntm
subclass of: SO_0000673
so part of: ntm
location: complement(join(2452806..2454909,2462253..2462288,2463141..2463292,2464082..2464202,2464651..2464782,2488224..2488349,2503545..2503777,2550343..2550550))
location: region:2452806-2550550:-1
so has part: feature:2550343-2550550:-1:exon
so has part: feature:2503545-2503777:-1:exon
so has part: feature:2488224-2488349:-1:exon
so has part: feature:2464651-2464782:-1:exon
so has part: feature:2464082-2464202:-1:exon
so has part: feature:2463141-2463292:-1:exon
so has part: feature:2462253-2462288:-1:exon
so has part: feature:2452806-2454909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2550343-2550550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2503545-2503777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2488224-2488349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2464651-2464782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2464082-2464202:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2463141-2463292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2462253-2462288:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2452806-2454909:-1:exon

ntm
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: ntm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurotrimin isoform X2
translation: MKNPICWVILIGMTILFLQQGAPVQSGDTSPFNRVMDNLTVRQGDSIALRCAIDNQMTRTAWLNRSTILYAGRDKWTLDERVSLQLYNNREYTIKINNVQVQDEGLYTCAVQTNLHPRTTIVHLIVQVPPTIMTISPDVSVNEGANVSIVCLATGKPEPVVTWRHLSPIAQGFMSEEEYLEIPSITKQDAGVYECSASNEVSTDIKKVQIIVNFPPYISDAKNLGVAVGQKGILRCEAIAVPTAAFEWYIEDRRIFSGFNGIQIQSKGRLSMLTFLNVSEEDYGNYTCMASNKLGNATTSLILYETNEPTSSTLVQEKTTSTKYAILRDVGAAQDVKSVGAGSQASACLLLVLCVQLLLKF
SIO_010081: ntm
subclass of: SO_0000673
so part of: ntm
location: complement(join(2454809..2454909,2456640..2456675,2462253..2462288,2463141..2463292,2464082..2464202,2464651..2464782,2488224..2488349,2503545..2503777,2550343..2550430,2640778..2640838))
location: region:2454809-2640838:-1
so has part: feature:2640778-2640838:-1:exon
so has part: feature:2550343-2550430:-1:exon
so has part: feature:2503545-2503777:-1:exon
so has part: feature:2488224-2488349:-1:exon
so has part: feature:2464651-2464782:-1:exon
so has part: feature:2464082-2464202:-1:exon
so has part: feature:2463141-2463292:-1:exon
so has part: feature:2462253-2462288:-1:exon
so has part: feature:2456640-2456675:-1:exon
so has part: feature:2454809-2454909:-1:exon

XP_041090729.1
type: Protein
SIO_000068: ncbiprotein

position:2454809:-1
position: 2454809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2640838:-1
position: 2640838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2640778-2640838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2550343-2550430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2503545-2503777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2488224-2488349:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2464651-2464782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2464082-2464202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2463141-2463292:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2462253-2462288:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2456640-2456675:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2454809-2454909:-1:exon

ntm
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: ntm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurotrimin isoform X5
translation: MGVCVCFVTPWRCLVVLSLRLLFLVPAGAPVQSGDTSPFNRVMDNLTVRQGDSIALRCAIDNQMTRTAWLNRSTILYAGRDKWTLDERVSLQLYNNREYTIKINNVQVQDEGLYTCAVQTNLHPRTTIVHLIVQVPPTIMTISPDVSVNEGANVSIVCLATGKPEPVVTWRHLSPIAQGFMSEEEYLEIPSITKQDAGVYECSASNEVSTDIKKVQIIVNFPPYISDAKNLGVAVGQKGILRCEAIAVPTAAFEWYIEDRRIFSGFNGIQIQSKGRLSMLTFLNVSEEDYGNYTCMASNKLGNATTSLILYDVGAAQDVKSVGAGSQASACLLLVLCVQLLLKF
SIO_010081: ntm
subclass of: SO_0000673
so part of: ntm
location: complement(join(2454809..2454909,2463141..2463292,2464082..2464202,2464651..2464782,2488224..2488349,2503545..2503777,2550343..2550512))
location: region:2454809-2550512:-1
so has part: feature:2550343-2550512:-1:exon
so has part: feature:2503545-2503777:-1:exon
so has part: feature:2488224-2488349:-1:exon
so has part: feature:2464651-2464782:-1:exon
so has part: feature:2464082-2464202:-1:exon
so has part: feature:2463141-2463292:-1:exon
so has part: feature:2454809-2454909:-1:exon

XP_041090732.1
type: Protein
SIO_000068: ncbiprotein

position:2550512:-1
position: 2550512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550343-2550512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2503545-2503777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2488224-2488349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2464651-2464782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2464082-2464202:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2463141-2463292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2454809-2454909:-1:exon

ntm
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: ntm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurotrimin isoform X4
translation: MGVCVCFVTPWRCLVVLSLRLLFLVPAGAPVQSGDTSPFNRVMDNLTVRQGDSIALRCAIDNQMTRTAWLNRSTILYAGRDKWTLDERVSLQLYNNREYTIKINNVQVQDEGLYTCAVQTNLHPRTTIVHLIVQVPPTIMTISPDVSVNEGANVSIVCLATGKPEPVVTWRHLSPIAQGFMSEEEYLEIPSITKQDAGVYECSASNEVSTDIKKVQIIVNFPPYISDAKNLGVAVGQKGILRCEAIAVPTAAFEWYIEDRRIFSGFNGIQIQSKGRLSMLTFLNVSEEDYGNYTCMASNKLGNATTSLILYEKTTSTKYAILRDVGAAQDVKSVGAGSQASACLLLVLCVQLLLKF
SIO_010081: ntm
subclass of: SO_0000673
so part of: ntm
location: complement(join(2454809..2454909,2456640..2456675,2463141..2463292,2464082..2464202,2464651..2464782,2488224..2488349,2503545..2503777,2550343..2550512))
location: region:2454809-2550512:-1
so has part: feature:2550343-2550512:-1:exon
so has part: feature:2503545-2503777:-1:exon
so has part: feature:2488224-2488349:-1:exon
so has part: feature:2464651-2464782:-1:exon
so has part: feature:2464082-2464202:-1:exon
so has part: feature:2463141-2463292:-1:exon
so has part: feature:2456640-2456675:-1:exon
so has part: feature:2454809-2454909:-1:exon

XP_041090731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2550343-2550512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2503545-2503777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2488224-2488349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2464651-2464782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2464082-2464202:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2463141-2463292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2456640-2456675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2454809-2454909:-1:exon

ntm
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: ntm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurotrimin isoform X3
translation: MGVCVCFVTPWRCLVVLSLRLLFLVPAGAPVQSGDTSPFNRVMDNLTVRQGDSIALRCAIDNQMTRTAWLNRSTILYAGRDKWTLDERVSLQLYNNREYTIKINNVQVQDEGLYTCAVQTNLHPRTTIVHLIVQVPPTIMTISPDVSVNEGANVSIVCLATGKPEPVVTWRHLSPIAQGFMSEEEYLEIPSITKQDAGVYECSASNEVSTDIKKVQIIVNFPPYISDAKNLGVAVGQKGILRCEAIAVPTAAFEWYIEDRRIFSGFNGIQIQSKGRLSMLTFLNVSEEDYGNYTCMASNKLGNATTSLILYETNEPTSSTLVQDVGAAQDVKSVGAGSQASACLLLVLCVQLLLKF
SIO_010081: ntm
subclass of: SO_0000673
so part of: ntm
location: complement(join(2454809..2454909,2462253..2462288,2463141..2463292,2464082..2464202,2464651..2464782,2488224..2488349,2503545..2503777,2550343..2550512))
location: region:2454809-2550512:-1
so has part: feature:2550343-2550512:-1:exon
so has part: feature:2503545-2503777:-1:exon
so has part: feature:2488224-2488349:-1:exon
so has part: feature:2464651-2464782:-1:exon
so has part: feature:2464082-2464202:-1:exon
so has part: feature:2463141-2463292:-1:exon
so has part: feature:2462253-2462288:-1:exon
so has part: feature:2454809-2454909:-1:exon

XP_041090730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2550343-2550512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2503545-2503777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2488224-2488349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2464651-2464782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2464082-2464202:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2463141-2463292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2462253-2462288:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2454809-2454909:-1:exon

ntm
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: ntm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurotrimin isoform X1
translation: MGVCVCFVTPWRCLVVLSLRLLFLVPAGAPVQSGDTSPFNRVMDNLTVRQGDSIALRCAIDNQMTRTAWLNRSTILYAGRDKWTLDERVSLQLYNNREYTIKINNVQVQDEGLYTCAVQTNLHPRTTIVHLIVQVPPTIMTISPDVSVNEGANVSIVCLATGKPEPVVTWRHLSPIAQGFMSEEEYLEIPSITKQDAGVYECSASNEVSTDIKKVQIIVNFPPYISDAKNLGVAVGQKGILRCEAIAVPTAAFEWYIEDRRIFSGFNGIQIQSKGRLSMLTFLNVSEEDYGNYTCMASNKLGNATTSLILYETNEPTSSTLVQEKTTSTKYAILRDVGAAQDVKSVGAGSQASACLLLVLCVQLLLKF
SIO_010081: ntm
subclass of: SO_0000673
so part of: ntm
location: complement(join(2454809..2454909,2456640..2456675,2462253..2462288,2463141..2463292,2464082..2464202,2464651..2464782,2488224..2488349,2503545..2503777,2550343..2550512))
location: region:2454809-2550512:-1
so has part: feature:2550343-2550512:-1:exon
so has part: feature:2503545-2503777:-1:exon
so has part: feature:2488224-2488349:-1:exon
so has part: feature:2464651-2464782:-1:exon
so has part: feature:2464082-2464202:-1:exon
so has part: feature:2463141-2463292:-1:exon
so has part: feature:2462253-2462288:-1:exon
so has part: feature:2456640-2456675:-1:exon
so has part: feature:2454809-2454909:-1:exon

XP_041090728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2550343-2550512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2503545-2503777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2488224-2488349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2464651-2464782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2464082-2464202:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2463141-2463292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2462253-2462288:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2456640-2456675:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2454809-2454909:-1:exon

lim2.1
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: lim2.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2652496..2658444
location: region:2652496-2658444:1
so has part: feature:2652496-2658444:1:exon
subclass of: SO_0000010

121304083
type: Gene
SIO_000068: ncbigene

position:2652496:1
position: 2652496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2658444:1
position: 2658444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2652496-2658444:1:exon

lim2.1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: lim2.1
product: lens intrinsic membrane protein 2.1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041235053.1
SIO_010081: lim2.1
subclass of: SO_0000673
so part of: lim2.1
location: join(2652496..2652596,2654706..2654881,2655875..2656024,2656535..2656669,2657378..2658444)
location: region:2652496-2658444:1
so has part: feature:2652496-2652596:1:exon
so has part: feature:2654706-2654881:1:exon
so has part: feature:2655875-2656024:1:exon
so has part: feature:2656535-2656669:1:exon
so has part: feature:2657378-2658444:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2652496-2652596:1:exon

position:2652596:1
position: 2652596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2654706-2654881:1:exon

position:2654706:1
position: 2654706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2654881:1
position: 2654881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2655875-2656024:1:exon

position:2655875:1
position: 2655875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2656024:1
position: 2656024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2656535-2656669:1:exon

position:2656535:1
position: 2656535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2656669:1
position: 2656669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2657378-2658444:1:exon

position:2657378:1
position: 2657378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

lim2.1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: lim2.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lens intrinsic membrane protein 2.1
translation: MYSFMGGGLFCAGIGNILLIVSTATDYWMQYRHSGNYMHQGLWKYCVTGKCYSHTDSIAYWDAARAFMILSLLACFFGIIIGILAFIHYSSFDRFDKTFAAGILFFISCIFALLAMAVYTGVTVNYYGKGYGYWRFSWSYITGWVAVILMFFSGIFYVCAYRMNECPRSTSSH
SIO_010081: lim2.1
subclass of: SO_0000673
so part of: lim2.1
location: join(2654707..2654881,2655875..2656024,2656535..2656669,2657378..2657439)
location: region:2654707-2657439:1
so has part: feature:2654707-2654881:1:exon
so has part: feature:2655875-2656024:1:exon
so has part: feature:2656535-2656669:1:exon
so has part: feature:2657378-2657439:1:exon

XP_041090987.1
type: Protein
SIO_000068: ncbiprotein

position:2654707:1
position: 2654707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2657439:1
position: 2657439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2654707-2654881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2655875-2656024:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2656535-2656669:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2657378-2657439:1:exon

bsx
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: bsx
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2664341..2667089
location: region:2664341-2667089:1
so has part: feature:2664341-2667089:1:exon
subclass of: SO_0000010

121303936
type: Gene
SIO_000068: ncbigene

position:2664341:1
position: 2664341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2667089:1
position: 2667089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2664341-2667089:1:exon

bsx
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: bsx
product: brain-specific homeobox
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041234837.1
SIO_010081: bsx
subclass of: SO_0000673
so part of: bsx
location: join(2664341..2664690,2666244..2666434,2666697..2667089)
location: region:2664341-2667089:1
so has part: feature:2664341-2664690:1:exon
so has part: feature:2666244-2666434:1:exon
so has part: feature:2666697-2667089:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2664341-2664690:1:exon

position:2664690:1
position: 2664690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2666244-2666434:1:exon

position:2666244:1
position: 2666244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2666434:1
position: 2666434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2666697-2667089:1:exon

position:2666697:1
position: 2666697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

bsx
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: bsx
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brain-specific homeobox protein homolog
translation: MNLNFTSPAHPMPSQRPTSFFIEDILLHKPKPLREVFPSPFHSLASRVPLLEYGYPLMPTPILAPHPHHHLHKPDHHPYFLTSPGMHVPALFQHHPEIPGKHCRRRKARTVFSDSQLSGLEKRFEVQRYLSTPERVELASTLSLSETQVKTWFQNRRMKHKKQLRKTIEEQKSPNDLDPSQEHNSGETEGSEKFSSEVKTICNQDSYISEDNEDDVDIEDDDVCSQEHLL
SIO_010081: bsx
subclass of: SO_0000673
so part of: bsx
location: join(2664438..2664690,2666244..2666434,2666697..2666945)
location: region:2664438-2666945:1
so has part: feature:2664438-2664690:1:exon
so has part: feature:2666244-2666434:1:exon
so has part: feature:2666697-2666945:1:exon

XP_041090771.1
type: Protein
SIO_000068: ncbiprotein

position:2664438:1
position: 2664438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2666945:1
position: 2666945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2664438-2664690:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2666244-2666434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2666697-2666945:1:exon

jhy
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: jhy
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2672100..2695384)
location: region:2672100-2695384:-1
so has part: feature:2672100-2695384:-1:exon
subclass of: SO_0000010

121303955
type: Gene
SIO_000068: ncbigene

position:2672100:-1
position: 2672100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2695384:-1
position: 2695384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2672100-2695384:-1:exon

jhy
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: jhy
product: junctional cadherin complex regulator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041234857.1
SIO_010081: jhy
subclass of: SO_0000673
so part of: jhy
location: complement(join(2672100..2672653,2673101..2673235,2673494..2673580,2675683..2675968,2676300..2676991,2680926..2681033,2689238..2689904,2695380..2695384))
location: region:2672100-2695384:-1
so has part: feature:2695380-2695384:-1:exon
so has part: feature:2689238-2689904:-1:exon
so has part: feature:2680926-2681033:-1:exon
so has part: feature:2676300-2676991:-1:exon
so has part: feature:2675683-2675968:-1:exon
so has part: feature:2673494-2673580:-1:exon
so has part: feature:2673101-2673235:-1:exon
so has part: feature:2672100-2672653:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2695380-2695384:-1:exon

position:2695380:-1
position: 2695380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2689238-2689904:-1:exon

position:2689238:-1
position: 2689238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2689904:-1
position: 2689904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2680926-2681033:-1:exon

position:2680926:-1
position: 2680926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2681033:-1
position: 2681033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2676300-2676991:-1:exon

position:2676300:-1
position: 2676300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2676991:-1
position: 2676991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2675683-2675968:-1:exon

position:2675683:-1
position: 2675683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2675968:-1
position: 2675968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2673494-2673580:-1:exon

position:2673494:-1
position: 2673494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2673580:-1
position: 2673580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2673101-2673235:-1:exon

position:2673101:-1
position: 2673101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2673235:-1
position: 2673235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2672100-2672653:-1:exon

position:2672653:-1
position: 2672653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

jhy
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: jhy
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: jhy protein homolog
translation: MRRAGYEDEYAELRYNPNWRVDLGQPRVIAMRGSQDEELGESHGMSEESPRKPWEEEEEREGPVFNKHAPAVSFSLSRTETDLKTKPKLPSTPYRREKILQQGPSALNHERQSKHERGRERRAMRNHRHPEPPHECHRDSVDDVEIEEGMIFMVQQSEHSSGTVESKEQAHCNEKHAHKSHEKQGKPREDFVEKNKLTLGKNAPKQGSYLHKHSQKRETGSQPQQALRAAEEPRSISSQESPEEVLDPEERWQQRAQALQVQNKVRKAPKRGGNNQTGSRKPPRPPDSQNHRGRQRQRVPVDVPEEGHLFPESHPYHSSPALADVLVIDDLDSHQTSPSGSYSSSMASALNRSSYTPLKQKAPTVNLNINLNTSSDFLPFVSQDHRQTSINLAPPQDYLGKAVFQSPRARSKPRFQEHPNPQEIISPFYPQQFSRPPLASLPNPHPSYKDFQGYHDQISPTVPQYRARGRQRQDPTACYHHDTRNDHHRDRFSPPHQMPFHQRQNLDPWFGHLNQPSQWPDGSQPPEQRGRSFTVLPPIGLSATSDSELRERVGEPGGGTLQRSSSEGYLAQMEKQKQLKEGANYKAYTLRDYKNLKQDVQLGGLGRSNQVSEETAEKIKRQRHYSNQVKEQNMKMSKNPYTSTSKPQSNENTEDTPRKKALEYARNIPKPKPPPQPRGAAKKPTRGGLNEHARYLEDLDLSQLATLEMLQRRHEEEKQLVSTFRALHVA
SIO_010081: jhy
subclass of: SO_0000673
so part of: jhy
location: complement(join(2672441..2672653,2673101..2673235,2673494..2673580,2675683..2675968,2676300..2676991,2680926..2681033,2689238..2689904,2695380..2695384))
location: region:2672441-2695384:-1
so has part: feature:2695380-2695384:-1:exon
so has part: feature:2689238-2689904:-1:exon
so has part: feature:2680926-2681033:-1:exon
so has part: feature:2676300-2676991:-1:exon
so has part: feature:2675683-2675968:-1:exon
so has part: feature:2673494-2673580:-1:exon
so has part: feature:2673101-2673235:-1:exon
so has part: feature:2672441-2672653:-1:exon

XP_041090791.1
type: Protein
SIO_000068: ncbiprotein

position:2672441:-1
position: 2672441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2695380-2695384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2689238-2689904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2680926-2681033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2676300-2676991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2675683-2675968:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2673494-2673580:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2673101-2673235:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2672441-2672653:-1:exon

LOC121303974
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2696049..2700341)
location: region:2696049-2700341:-1
so has part: feature:2696049-2700341:-1:exon
subclass of: SO_0000010

121303974
type: Gene
SIO_000068: ncbigene

position:2696049:-1
position: 2696049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2700341:-1
position: 2700341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2696049-2700341:-1:exon

LOC121303974
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303974
product: heat shock cognate 70 kDa protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 398 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041234876.1
SIO_010081: LOC121303974
subclass of: SO_0000673
so part of: LOC121303974
location: complement(join(2696049..2696437,2696712..2696944,2697190..2697388,2697747..2697949,2698315..2698870,2699128..2699280,2699574..2699779,2700117..2700341))
location: region:2696049-2700341:-1
so has part: feature:2700117-2700341:-1:exon
so has part: feature:2699574-2699779:-1:exon
so has part: feature:2699128-2699280:-1:exon
so has part: feature:2698315-2698870:-1:exon
so has part: feature:2697747-2697949:-1:exon
so has part: feature:2697190-2697388:-1:exon
so has part: feature:2696712-2696944:-1:exon
so has part: feature:2696049-2696437:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2700117-2700341:-1:exon

position:2700117:-1
position: 2700117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2699574-2699779:-1:exon

position:2699574:-1
position: 2699574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2699779:-1
position: 2699779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2699128-2699280:-1:exon

position:2699128:-1
position: 2699128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2699280:-1
position: 2699280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2698315-2698870:-1:exon

position:2698315:-1
position: 2698315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2698870:-1
position: 2698870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2697747-2697949:-1:exon

position:2697747:-1
position: 2697747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2697949:-1
position: 2697949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2697190-2697388:-1:exon

position:2697190:-1
position: 2697190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2697388:-1
position: 2697388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2696712-2696944:-1:exon

position:2696712:-1
position: 2696712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2696944:-1
position: 2696944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2696049-2696437:-1:exon

position:2696437:-1
position: 2696437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121303974
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock cognate 70 kDa protein
translation: MSKGTAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFEDTVVQSDMKHWPFNVVSDGGRPKLEVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKSVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKYKKDISDNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKTEDDVQREKVSSKNALESYAFNMKSTVEDEKLEGKISDEDKQKILEKCNEIIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQGAGGMPGGMPGGFPGAGAAPSGGGSSGPTIEEVD
SIO_010081: LOC121303974
subclass of: SO_0000673
so part of: LOC121303974
location: complement(join(2696252..2696437,2696712..2696944,2697190..2697388,2697747..2697949,2698315..2698870,2699128..2699280,2699574..2699779,2700117..2700321))
location: region:2696252-2700321:-1
so has part: feature:2700117-2700321:-1:exon
so has part: feature:2699574-2699779:-1:exon
so has part: feature:2699128-2699280:-1:exon
so has part: feature:2698315-2698870:-1:exon
so has part: feature:2697747-2697949:-1:exon
so has part: feature:2697190-2697388:-1:exon
so has part: feature:2696712-2696944:-1:exon
so has part: feature:2696252-2696437:-1:exon

XP_041090810.1
type: Protein
SIO_000068: ncbiprotein

position:2696252:-1
position: 2696252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2700321:-1
position: 2700321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2700117-2700321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2699574-2699779:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2699128-2699280:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2698315-2698870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2697747-2697949:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2697190-2697388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2696712-2696944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2696252-2696437:-1:exon

LOC121304100
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304100
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2697015..2697111)
location: region:2697015-2697111:-1
so has part: feature:2697015-2697111:-1:exon
subclass of: SO_0000578

121304100
type: Gene
SIO_000068: ncbigene

position:2697015:-1
position: 2697015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2697111:-1
position: 2697111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2697015-2697111:-1:exon

LOC121304100
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: snoRNA
gene: LOC121304100
product: small nucleolar RNA SNORD14
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00016
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005947922.1
SIO_010081: LOC121304100
subclass of: SO_0000673
so part of: LOC121304100
location: complement(2697015..2697111)
location: region:2697015-2697111:-1
so has part: feature:2697015-2697111:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2697015-2697111:-1:exon

LOC121304094
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304094
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2697505..2697601)
location: region:2697505-2697601:-1
so has part: feature:2697505-2697601:-1:exon
subclass of: SO_0000578

121304094
type: Gene
SIO_000068: ncbigene

position:2697505:-1
position: 2697505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2697601:-1
position: 2697601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2697505-2697601:-1:exon

LOC121304094
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: snoRNA
gene: LOC121304094
product: small nucleolar RNA SNORD14
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00016
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005947918.1
SIO_010081: LOC121304094
subclass of: SO_0000673
so part of: LOC121304094
location: complement(2697505..2697601)
location: region:2697505-2697601:-1
so has part: feature:2697505-2697601:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2697505-2697601:-1:exon

LOC121304098
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304098
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2698964..2699060)
location: region:2698964-2699060:-1
so has part: feature:2698964-2699060:-1:exon
subclass of: SO_0000578

121304098
type: Gene
SIO_000068: ncbigene

position:2698964:-1
position: 2698964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2699060:-1
position: 2699060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2698964-2699060:-1:exon

LOC121304098
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: snoRNA
gene: LOC121304098
product: small nucleolar RNA SNORD14
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00016
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005947920.1
SIO_010081: LOC121304098
subclass of: SO_0000673
so part of: LOC121304098
location: complement(2698964..2699060)
location: region:2698964-2699060:-1
so has part: feature:2698964-2699060:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2698964-2699060:-1:exon

LOC121304099
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304099
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2699359..2699455)
location: region:2699359-2699455:-1
so has part: feature:2699359-2699455:-1:exon
subclass of: SO_0000578

121304099
type: Gene
SIO_000068: ncbigene

position:2699359:-1
position: 2699359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2699455:-1
position: 2699455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2699359-2699455:-1:exon

LOC121304099
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: snoRNA
gene: LOC121304099
product: small nucleolar RNA SNORD14
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00016
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005947921.1
SIO_010081: LOC121304099
subclass of: SO_0000673
so part of: LOC121304099
location: complement(2699359..2699455)
location: region:2699359-2699455:-1
so has part: feature:2699359-2699455:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2699359-2699455:-1:exon

LOC121304095
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304095
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2699902..2699998)
location: region:2699902-2699998:-1
so has part: feature:2699902-2699998:-1:exon
subclass of: SO_0000578

121304095
type: Gene
SIO_000068: ncbigene

position:2699902:-1
position: 2699902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2699998:-1
position: 2699998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2699902-2699998:-1:exon

LOC121304095
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: snoRNA
gene: LOC121304095
product: small nucleolar RNA SNORD14
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00016
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005947919.1
SIO_010081: LOC121304095
subclass of: SO_0000673
so part of: LOC121304095
location: complement(2699902..2699998)
location: region:2699902-2699998:-1
so has part: feature:2699902-2699998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2699902-2699998:-1:exon

LOC121303925
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2862323..2885054)
location: region:2862323-2885054:-1
so has part: feature:2862323-2885054:-1:exon
subclass of: SO_0000010

121303925
type: Gene
SIO_000068: ncbigene

position:2862323:-1
position: 2862323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2885054:-1
position: 2885054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2862323-2885054:-1:exon

LOC121303925
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303925
product: homeobox protein PKNOX2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041234784.1
SIO_010081: LOC121303925
subclass of: SO_0000673
so part of: LOC121303925
location: complement(join(2862323..2862646,2864471..2864642,2869378..2869514,2877442..2877521,2883456..2885054))
location: region:2862323-2885054:-1
so has part: feature:2883456-2885054:-1:exon
so has part: feature:2877442-2877521:-1:exon
so has part: feature:2869378-2869514:-1:exon
so has part: feature:2864471-2864642:-1:exon
so has part: feature:2862323-2862646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2883456-2885054:-1:exon

position:2883456:-1
position: 2883456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2877442-2877521:-1:exon

position:2877442:-1
position: 2877442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2877521:-1
position: 2877521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2869378-2869514:-1:exon

position:2869378:-1
position: 2869378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2869514:-1
position: 2869514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2864471-2864642:-1:exon

position:2864471:-1
position: 2864471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2864642:-1
position: 2864642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2862323-2862646:-1:exon

position:2862646:-1
position: 2862646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121303925
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303925
product: homeobox protein PKNOX2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041234783.1
SIO_010081: LOC121303925
subclass of: SO_0000673
so part of: LOC121303925
location: complement(join(2862323..2862646,2864471..2864642,2869378..2869514,2873378..2873486,2877442..2877521,2883456..2883474))
location: region:2862323-2883474:-1
so has part: feature:2883456-2883474:-1:exon
so has part: feature:2877442-2877521:-1:exon
so has part: feature:2873378-2873486:-1:exon
so has part: feature:2869378-2869514:-1:exon
so has part: feature:2864471-2864642:-1:exon
so has part: feature:2862323-2862646:-1:exon

position:2883474:-1
position: 2883474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2883456-2883474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2877442-2877521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2873378-2873486:-1:exon

position:2873378:-1
position: 2873378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2873486:-1
position: 2873486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2869378-2869514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2864471-2864642:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2862323-2862646:-1:exon

LOC121303925
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303925
product: homeobox protein PKNOX2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041234785.1
SIO_010081: LOC121303925
subclass of: SO_0000673
so part of: LOC121303925
location: complement(join(2862323..2862646,2864471..2864642,2869378..2869514,2871180..2871286,2873378..2873460))
location: region:2862323-2873460:-1
so has part: feature:2873378-2873460:-1:exon
so has part: feature:2871180-2871286:-1:exon
so has part: feature:2869378-2869514:-1:exon
so has part: feature:2864471-2864642:-1:exon
so has part: feature:2862323-2862646:-1:exon

position:2873460:-1
position: 2873460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2873378-2873460:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2871180-2871286:-1:exon

position:2871180:-1
position: 2871180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2871286:-1
position: 2871286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2869378-2869514:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2864471-2864642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2862323-2862646:-1:exon

LOC121303925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2-like isoform X1
translation: MMQHVSPAPALTMMATQSVPPPSYQESQQMTGTTQQTSKSQPVHIPASSAAGTTPVSVTLDPQAQLESDKRAVYRHPLFPLLALLFEKCEQATQGSECITSASFDVDIENFVHQQEQDHKPFFSEDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRSDLSGPYSPTHTTLSLQQVRHSRPSLLISKAGFIAPLSQISIQFTHCREICGLCETNV
SIO_010081: LOC121303925
subclass of: SO_0000673
so part of: LOC121303925
location: complement(join(2862338..2862646,2864471..2864642,2869378..2869514,2873378..2873464))
location: region:2862338-2873464:-1
so has part: feature:2873378-2873464:-1:exon
so has part: feature:2869378-2869514:-1:exon
so has part: feature:2864471-2864642:-1:exon
so has part: feature:2862338-2862646:-1:exon

XP_041090717.1
type: Protein
SIO_000068: ncbiprotein

position:2862338:-1
position: 2862338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2873464:-1
position: 2873464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2873378-2873464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2869378-2869514:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2864471-2864642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2862338-2862646:-1:exon

LOC121303925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2-like isoform X2
translation: MTGTTQQTSKSQPVHIPASSAAGTTPVSVTLDPQAQLESDKRAVYRHPLFPLLALLFEKCEQATQGSECITSASFDVDIENFVHQQEQDHKPFFSEDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRSDLSGPYSPTHTTLSLQQVRHSRPSLLISKAGFIAPLSQISIQFTHCREICGLCETNV
SIO_010081: LOC121303925
subclass of: SO_0000673
so part of: LOC121303925
location: complement(join(2862338..2862646,2864471..2864642,2869378..2869514))
location: region:2862338-2869514:-1
so has part: feature:2869378-2869514:-1:exon
so has part: feature:2864471-2864642:-1:exon
so has part: feature:2862338-2862646:-1:exon

XP_041090718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2869378-2869514:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2864471-2864642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2862338-2862646:-1:exon

LOC121303925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2-like isoform X2
translation: MTGTTQQTSKSQPVHIPASSAAGTTPVSVTLDPQAQLESDKRAVYRHPLFPLLALLFEKCEQATQGSECITSASFDVDIENFVHQQEQDHKPFFSEDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRSDLSGPYSPTHTTLSLQQVRHSRPSLLISKAGFIAPLSQISIQFTHCREICGLCETNV
SIO_010081: LOC121303925
subclass of: SO_0000673
so part of: LOC121303925
location: complement(join(2862338..2862646,2864471..2864642,2869378..2869514))
location: region:2862338-2869514:-1
so has part: feature:2869378-2869514:-1:exon
so has part: feature:2864471-2864642:-1:exon
so has part: feature:2862338-2862646:-1:exon

XP_041090719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2869378-2869514:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2864471-2864642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2862338-2862646:-1:exon

robo4
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: robo4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2893905..2911013
location: region:2893905-2911013:1
so has part: feature:2893905-2911013:1:exon
subclass of: SO_0000010

121304029
type: Gene
SIO_000068: ncbigene

position:2893905:1
position: 2893905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2911013:1
position: 2911013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2893905-2911013:1:exon

robo4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: robo4
product: roundabout, axon guidance receptor, homolog 4 (Drosophila), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041234974.1
SIO_010081: robo4
subclass of: SO_0000673
so part of: robo4
location: join(2893905..2894112,2901623..2901946,2903042..2903199,2903428..2903548,2903664..2903802,2903902..2904029,2904169..2904284,2904408..2904627,2904875..2904996,2905264..2905435,2905667..2905864,2906510..2906552,2906844..2906959,2907322..2907633,2907814..2907921,2908330..2908474,2908742..2908975,2909125..2909492,2910210..2911013)
location: region:2893905-2911013:1
so has part: feature:2893905-2894112:1:exon
so has part: feature:2901623-2901946:1:exon
so has part: feature:2903042-2903199:1:exon
so has part: feature:2903428-2903548:1:exon
so has part: feature:2903664-2903802:1:exon
so has part: feature:2903902-2904029:1:exon
so has part: feature:2904169-2904284:1:exon
so has part: feature:2904408-2904627:1:exon
so has part: feature:2904875-2904996:1:exon
so has part: feature:2905264-2905435:1:exon
so has part: feature:2905667-2905864:1:exon
so has part: feature:2906510-2906552:1:exon
so has part: feature:2906844-2906959:1:exon
so has part: feature:2907322-2907633:1:exon
so has part: feature:2907814-2907921:1:exon
so has part: feature:2908330-2908474:1:exon
so has part: feature:2908742-2908975:1:exon
so has part: feature:2909125-2909492:1:exon
so has part: feature:2910210-2911013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2893905-2894112:1:exon

position:2894112:1
position: 2894112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2901623-2901946:1:exon

position:2901623:1
position: 2901623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2901946:1
position: 2901946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2903042-2903199:1:exon

position:2903042:1
position: 2903042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2903199:1
position: 2903199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2903428-2903548:1:exon

position:2903428:1
position: 2903428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2903548:1
position: 2903548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2903664-2903802:1:exon

position:2903664:1
position: 2903664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2903802:1
position: 2903802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2903902-2904029:1:exon

position:2903902:1
position: 2903902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2904029:1
position: 2904029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2904169-2904284:1:exon

position:2904169:1
position: 2904169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2904284:1
position: 2904284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2904408-2904627:1:exon

position:2904408:1
position: 2904408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2904627:1
position: 2904627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2904875-2904996:1:exon

position:2904875:1
position: 2904875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2904996:1
position: 2904996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2905264-2905435:1:exon

position:2905264:1
position: 2905264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2905435:1
position: 2905435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2905667-2905864:1:exon

position:2905667:1
position: 2905667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2905864:1
position: 2905864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2906510-2906552:1:exon

position:2906510:1
position: 2906510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2906552:1
position: 2906552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2906844-2906959:1:exon

position:2906844:1
position: 2906844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2906959:1
position: 2906959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2907322-2907633:1:exon

position:2907322:1
position: 2907322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2907633:1
position: 2907633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2907814-2907921:1:exon

position:2907814:1
position: 2907814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2907921:1
position: 2907921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2908330-2908474:1:exon

position:2908330:1
position: 2908330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2908474:1
position: 2908474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2908742-2908975:1:exon

position:2908742:1
position: 2908742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2908975:1
position: 2908975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2909125-2909492:1:exon

position:2909125:1
position: 2909125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2909492:1
position: 2909492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2910210-2911013:1:exon

position:2910210:1
position: 2910210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

robo4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: robo4
product: roundabout, axon guidance receptor, homolog 4 (Drosophila), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041234973.1
SIO_010081: robo4
subclass of: SO_0000673
so part of: robo4
location: join(2893905..2894112,2901623..2901946,2903042..2903199,2903428..2903548,2903664..2903802,2903902..2904029,2904169..2904284,2904408..2904627,2904875..2904996,2905264..2905435,2905667..2905864,2906510..2906552,2906844..2906959,2907322..2907633,2907814..2907921,2908330..2908474,2908742..2908975,2909128..2909964)
location: region:2893905-2909964:1
so has part: feature:2893905-2894112:1:exon
so has part: feature:2901623-2901946:1:exon
so has part: feature:2903042-2903199:1:exon
so has part: feature:2903428-2903548:1:exon
so has part: feature:2903664-2903802:1:exon
so has part: feature:2903902-2904029:1:exon
so has part: feature:2904169-2904284:1:exon
so has part: feature:2904408-2904627:1:exon
so has part: feature:2904875-2904996:1:exon
so has part: feature:2905264-2905435:1:exon
so has part: feature:2905667-2905864:1:exon
so has part: feature:2906510-2906552:1:exon
so has part: feature:2906844-2906959:1:exon
so has part: feature:2907322-2907633:1:exon
so has part: feature:2907814-2907921:1:exon
so has part: feature:2908330-2908474:1:exon
so has part: feature:2908742-2908975:1:exon
so has part: feature:2909128-2909964:1:exon

position:2909964:1
position: 2909964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2893905-2894112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2901623-2901946:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2903042-2903199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2903428-2903548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2903664-2903802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2903902-2904029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2904169-2904284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2904408-2904627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2904875-2904996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2905264-2905435:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2905667-2905864:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2906510-2906552:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2906844-2906959:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2907322-2907633:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2907814-2907921:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2908330-2908474:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2908742-2908975:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2909128-2909964:1:exon

position:2909128:1
position: 2909128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

robo4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: robo4
product: roundabout, axon guidance receptor, homolog 4 (Drosophila), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041234972.1
SIO_010081: robo4
subclass of: SO_0000673
so part of: robo4
location: join(2893905..2894112,2901623..2901946,2903042..2903199,2903428..2903548,2903664..2903802,2903902..2904029,2904169..2904284,2904408..2904627,2904875..2904996,2905264..2905435,2905667..2905864,2906510..2906552,2906844..2906959,2907322..2907633,2907814..2907921,2908330..2908474,2908742..2908975,2909125..2909960)
location: region:2893905-2909960:1
so has part: feature:2893905-2894112:1:exon
so has part: feature:2901623-2901946:1:exon
so has part: feature:2903042-2903199:1:exon
so has part: feature:2903428-2903548:1:exon
so has part: feature:2903664-2903802:1:exon
so has part: feature:2903902-2904029:1:exon
so has part: feature:2904169-2904284:1:exon
so has part: feature:2904408-2904627:1:exon
so has part: feature:2904875-2904996:1:exon
so has part: feature:2905264-2905435:1:exon
so has part: feature:2905667-2905864:1:exon
so has part: feature:2906510-2906552:1:exon
so has part: feature:2906844-2906959:1:exon
so has part: feature:2907322-2907633:1:exon
so has part: feature:2907814-2907921:1:exon
so has part: feature:2908330-2908474:1:exon
so has part: feature:2908742-2908975:1:exon
so has part: feature:2909125-2909960:1:exon

position:2909960:1
position: 2909960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2893905-2894112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2901623-2901946:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2903042-2903199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2903428-2903548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2903664-2903802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2903902-2904029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2904169-2904284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2904408-2904627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2904875-2904996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2905264-2905435:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2905667-2905864:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2906510-2906552:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2906844-2906959:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2907322-2907633:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2907814-2907921:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2908330-2908474:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2908742-2908975:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2909125-2909960:1:exon

robo4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: robo4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X3
translation: MMHRVLLLSTLWFCTWADGSRQCHCQCTCSPELAPSRDPRGPGREHTGQRPPRFPHLRQRAHGKKGSWLRLDEFPPRIVHHPSDLVVKADSPASLSCRAEGNPPPVIEWHRNGAPLETNRPGGQSTAIVLPDGNLFFLRVVPGRRGHSDEGVYTCIARNSLGKATSNATLYIAALREEFRAQPSDVEVAVGEPVVMNCTPPKGHPEPNITWKKDGELINRTQERYNILSGRLIIANAQKNDSGVYVCLAWNIVGERESRAGRLSVLEKPVFARKPDDATVKVGGSVQFRCEARGDPMPAVHWSKEQGQLPSGRYEVSPDQTLRIHYITALDSGRYTCTATNQVGSTSVSASLAVQEVLDTGQRDLHKELSVLRVHLENITVHPLLSNTVHILWKVQSEPHHLSGFEVLYRSLMPASSDWTERKFPVQRSAVIGPLKRGYKYEFKVRPFAGGLYGQESNTKHLRIPEQVPSAPPLGVAVTMSSENNGTVLVSWEPPPHEAHNGIIQSYQVWCVRSGGQLSSNWTVDSGTHSLEITALDSDTQYWISVAAINGAGVGQLSEPHLLFMEPTMEAAAPPPLDTGPLDQVLRVLRGPVFIGSAGALLWLALMVTAVCLYRRHGRQARLKHAHHTSASLYRMASEDLIIRHRMAAPDSPWSSSAWKSAPCSERYPGLWAQSKENPGFRKTTLPKNKKDPCPPDTAVPIVPDNCGLYGTFYVDLSGVGLRTFSSPTRSPKVPHPGAKTPDVARFSQPVFKSSTNGEGQRLPWKQALPAQPNMGVLKESWEKNYKRELHAVNSAPLVPTWQCSELLKSAPRASVARVCHIAKGGLPVGSKSASSPKILHYSASLRMIDVLPAPPPFPELEDDTQSLSSEEDSSKSTKLTVEGGSVLLGGAAPGPQELPARDDPSYLTLSYSRLSTASFSLSLDEQNDGPLTAEEVEQYLELRHEAEDCSSLLSVSPPSLPHPFSPTPTFGYICGPMPCDLDAEDLADDLAVPGSRQLRPRGGTLRRCPTSSPCCSEWEGSMWNGWGSISEGNAPSARASLISSSDGSFMNDANFARVLAVAAETLGGGAFSVRTP
SIO_010081: robo4
subclass of: SO_0000673
so part of: robo4
location: join(2893917..2894112,2901623..2901946,2903042..2903199,2903428..2903548,2903664..2903802,2903902..2904029,2904169..2904284,2904408..2904627,2904875..2904996,2905264..2905435,2905667..2905864,2906510..2906552,2906844..2906959,2907322..2907633,2907814..2907921,2908330..2908474,2908742..2908975,2909125..2909492,2910210..2910223)
location: region:2893917-2910223:1
so has part: feature:2893917-2894112:1:exon
so has part: feature:2901623-2901946:1:exon
so has part: feature:2903042-2903199:1:exon
so has part: feature:2903428-2903548:1:exon
so has part: feature:2903664-2903802:1:exon
so has part: feature:2903902-2904029:1:exon
so has part: feature:2904169-2904284:1:exon
so has part: feature:2904408-2904627:1:exon
so has part: feature:2904875-2904996:1:exon
so has part: feature:2905264-2905435:1:exon
so has part: feature:2905667-2905864:1:exon
so has part: feature:2906510-2906552:1:exon
so has part: feature:2906844-2906959:1:exon
so has part: feature:2907322-2907633:1:exon
so has part: feature:2907814-2907921:1:exon
so has part: feature:2908330-2908474:1:exon
so has part: feature:2908742-2908975:1:exon
so has part: feature:2909125-2909492:1:exon
so has part: feature:2910210-2910223:1:exon

XP_041090908.1
type: Protein
SIO_000068: ncbiprotein

position:2893917:1
position: 2893917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2910223:1
position: 2910223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2893917-2894112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2901623-2901946:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2903042-2903199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2903428-2903548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2903664-2903802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2903902-2904029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2904169-2904284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2904408-2904627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2904875-2904996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2905264-2905435:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2905667-2905864:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2906510-2906552:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2906844-2906959:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2907322-2907633:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2907814-2907921:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2908330-2908474:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2908742-2908975:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2909125-2909492:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2910210-2910223:1:exon

robo4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: robo4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X1
translation: MMHRVLLLSTLWFCTWADGSRQCHCQCTCSPELAPSRDPRGPGREHTGQRPPRFPHLRQRAHGKKGSWLRLDEFPPRIVHHPSDLVVKADSPASLSCRAEGNPPPVIEWHRNGAPLETNRPGGQSTAIVLPDGNLFFLRVVPGRRGHSDEGVYTCIARNSLGKATSNATLYIAALREEFRAQPSDVEVAVGEPVVMNCTPPKGHPEPNITWKKDGELINRTQERYNILSGRLIIANAQKNDSGVYVCLAWNIVGERESRAGRLSVLEKPVFARKPDDATVKVGGSVQFRCEARGDPMPAVHWSKEQGQLPSGRYEVSPDQTLRIHYITALDSGRYTCTATNQVGSTSVSASLAVQEVLDTGQRDLHKELSVLRVHLENITVHPLLSNTVHILWKVQSEPHHLSGFEVLYRSLMPASSDWTERKFPVQRSAVIGPLKRGYKYEFKVRPFAGGLYGQESNTKHLRIPEQVPSAPPLGVAVTMSSENNGTVLVSWEPPPHEAHNGIIQSYQVWCVRSGGQLSSNWTVDSGTHSLEITALDSDTQYWISVAAINGAGVGQLSEPHLLFMEPTMEAAAPPPLDTGPLDQVLRVLRGPVFIGSAGALLWLALMVTAVCLYRRHGRQARLKHAHHTSASLYRMASEDLIIRHRMAAPDSPWSSSAWKSAPCSERYPGLWAQSKENPGFRKTTLPKNKKDPCPPDTAVPIVPDNCGLYGTFYVDLSGVGLRTFSSPTRSPKVPHPGAKTPDVARFSQPVFKSSTNGEGQRLPWKQALPAQPNMGVLKESWEKNYKRELHAVNSAPLVPTWQCSELLKSAPRASVARVCHIAKGGLPVGSKSASSPKILHYSASLRMIDVLPAPPPFPELEDDTQSLSSEEDSSKSTKLTVEGGSVLLGGAAPGPQELPARDDPSYLTLSYSRLSTASFSLSLDEQNDGPLTAEEVEQYLELRHEAEDCSSLLSVSPPSLPHPFSPTPTFGYICGPMPCDLDAEDLADDLAVPGSRQLRPRGGTLRRCPTSSPCCSEWEGSMWNGWGSISEGNAPSARASLISSSDGSFMNDANFARVLAVAAETLGGGAFSGRRGVHTGRGVISLCEDTLEKRK
SIO_010081: robo4
subclass of: SO_0000673
so part of: robo4
location: join(2893917..2894112,2901623..2901946,2903042..2903199,2903428..2903548,2903664..2903802,2903902..2904029,2904169..2904284,2904408..2904627,2904875..2904996,2905264..2905435,2905667..2905864,2906510..2906552,2906844..2906959,2907322..2907633,2907814..2907921,2908330..2908474,2908742..2908975,2909125..2909563)
location: region:2893917-2909563:1
so has part: feature:2893917-2894112:1:exon
so has part: feature:2901623-2901946:1:exon
so has part: feature:2903042-2903199:1:exon
so has part: feature:2903428-2903548:1:exon
so has part: feature:2903664-2903802:1:exon
so has part: feature:2903902-2904029:1:exon
so has part: feature:2904169-2904284:1:exon
so has part: feature:2904408-2904627:1:exon
so has part: feature:2904875-2904996:1:exon
so has part: feature:2905264-2905435:1:exon
so has part: feature:2905667-2905864:1:exon
so has part: feature:2906510-2906552:1:exon
so has part: feature:2906844-2906959:1:exon
so has part: feature:2907322-2907633:1:exon
so has part: feature:2907814-2907921:1:exon
so has part: feature:2908330-2908474:1:exon
so has part: feature:2908742-2908975:1:exon
so has part: feature:2909125-2909563:1:exon

XP_041090906.1
type: Protein
SIO_000068: ncbiprotein

position:2909563:1
position: 2909563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2893917-2894112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2901623-2901946:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2903042-2903199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2903428-2903548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2903664-2903802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2903902-2904029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2904169-2904284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2904408-2904627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2904875-2904996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2905264-2905435:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2905667-2905864:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2906510-2906552:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2906844-2906959:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2907322-2907633:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2907814-2907921:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2908330-2908474:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2908742-2908975:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2909125-2909563:1:exon

robo4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: robo4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X2
translation: MMHRVLLLSTLWFCTWADGSRQCHCQCTCSPELAPSRDPRGPGREHTGQRPPRFPHLRQRAHGKKGSWLRLDEFPPRIVHHPSDLVVKADSPASLSCRAEGNPPPVIEWHRNGAPLETNRPGGQSTAIVLPDGNLFFLRVVPGRRGHSDEGVYTCIARNSLGKATSNATLYIAALREEFRAQPSDVEVAVGEPVVMNCTPPKGHPEPNITWKKDGELINRTQERYNILSGRLIIANAQKNDSGVYVCLAWNIVGERESRAGRLSVLEKPVFARKPDDATVKVGGSVQFRCEARGDPMPAVHWSKEQGQLPSGRYEVSPDQTLRIHYITALDSGRYTCTATNQVGSTSVSASLAVQEVLDTGQRDLHKELSVLRVHLENITVHPLLSNTVHILWKVQSEPHHLSGFEVLYRSLMPASSDWTERKFPVQRSAVIGPLKRGYKYEFKVRPFAGGLYGQESNTKHLRIPEQVPSAPPLGVAVTMSSENNGTVLVSWEPPPHEAHNGIIQSYQVWCVRSGGQLSSNWTVDSGTHSLEITALDSDTQYWISVAAINGAGVGQLSEPHLLFMEPTMEAAAPPPLDTGPLDQVLRVLRGPVFIGSAGALLWLALMVTAVCLYRRHGRQARLKHAHHTSASLYRMASEDLIIRHRMAAPDSPWSSSAWKSAPCSERYPGLWAQSKENPGFRKTTLPKNKKDPCPPDTAVPIVPDNCGLYGTFYVDLSGVGLRTFSSPTRSPKVPHPGAKTPDVARFSQPVFKSSTNGEGQRLPWKQALPAQPNMGVLKESWEKNYKRELHAVNSAPLVPTWQCSELLKSAPRASVARVCHIAKGGLPVGSKSASSPKILHYSASLRMIDVLPAPPPFPELEDDTQSLSSEEDSSKSTKLTVEGGSVLLGGAAPGPQELPARDDPSYLTLSYSRLSTASFSLSLDEQNDGPLTAEEVEQYLELRHEAEDCSLLSVSPPSLPHPFSPTPTFGYICGPMPCDLDAEDLADDLAVPGSRQLRPRGGTLRRCPTSSPCCSEWEGSMWNGWGSISEGNAPSARASLISSSDGSFMNDANFARVLAVAAETLGGGAFSGRRGVHTGRGVISLCEDTLEKRK
SIO_010081: robo4
subclass of: SO_0000673
so part of: robo4
location: join(2893917..2894112,2901623..2901946,2903042..2903199,2903428..2903548,2903664..2903802,2903902..2904029,2904169..2904284,2904408..2904627,2904875..2904996,2905264..2905435,2905667..2905864,2906510..2906552,2906844..2906959,2907322..2907633,2907814..2907921,2908330..2908474,2908742..2908975,2909128..2909563)
location: region:2893917-2909563:1
so has part: feature:2893917-2894112:1:exon
so has part: feature:2901623-2901946:1:exon
so has part: feature:2903042-2903199:1:exon
so has part: feature:2903428-2903548:1:exon
so has part: feature:2903664-2903802:1:exon
so has part: feature:2903902-2904029:1:exon
so has part: feature:2904169-2904284:1:exon
so has part: feature:2904408-2904627:1:exon
so has part: feature:2904875-2904996:1:exon
so has part: feature:2905264-2905435:1:exon
so has part: feature:2905667-2905864:1:exon
so has part: feature:2906510-2906552:1:exon
so has part: feature:2906844-2906959:1:exon
so has part: feature:2907322-2907633:1:exon
so has part: feature:2907814-2907921:1:exon
so has part: feature:2908330-2908474:1:exon
so has part: feature:2908742-2908975:1:exon
so has part: feature:2909128-2909563:1:exon

XP_041090907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2893917-2894112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2901623-2901946:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2903042-2903199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2903428-2903548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2903664-2903802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2903902-2904029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2904169-2904284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2904408-2904627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2904875-2904996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2905264-2905435:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2905667-2905864:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2906510-2906552:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2906844-2906959:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2907322-2907633:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2907814-2907921:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2908330-2908474:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2908742-2908975:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2909128-2909563:1:exon

robo4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: robo4
product: roundabout, axon guidance receptor, homolog 4 (Drosophila), transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041234975.1
SIO_010081: robo4
subclass of: SO_0000673
so part of: robo4
location: join(2898696..2899014,2901623..2901946,2903042..2903199,2903428..2903548,2903664..2903802,2903902..2904029,2904169..2904284,2904408..2904627,2904875..2904996,2905264..2905435,2905667..2905864,2906510..2906552,2906844..2906959,2907322..2907633,2907814..2907921,2908330..2908474,2908742..2908975,2909125..2909957)
location: region:2898696-2909957:1
so has part: feature:2898696-2899014:1:exon
so has part: feature:2901623-2901946:1:exon
so has part: feature:2903042-2903199:1:exon
so has part: feature:2903428-2903548:1:exon
so has part: feature:2903664-2903802:1:exon
so has part: feature:2903902-2904029:1:exon
so has part: feature:2904169-2904284:1:exon
so has part: feature:2904408-2904627:1:exon
so has part: feature:2904875-2904996:1:exon
so has part: feature:2905264-2905435:1:exon
so has part: feature:2905667-2905864:1:exon
so has part: feature:2906510-2906552:1:exon
so has part: feature:2906844-2906959:1:exon
so has part: feature:2907322-2907633:1:exon
so has part: feature:2907814-2907921:1:exon
so has part: feature:2908330-2908474:1:exon
so has part: feature:2908742-2908975:1:exon
so has part: feature:2909125-2909957:1:exon

position:2898696:1
position: 2898696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2909957:1
position: 2909957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2898696-2899014:1:exon

position:2899014:1
position: 2899014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2901623-2901946:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2903042-2903199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2903428-2903548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2903664-2903802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2903902-2904029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2904169-2904284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2904408-2904627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2904875-2904996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2905264-2905435:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2905667-2905864:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2906510-2906552:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2906844-2906959:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2907322-2907633:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2907814-2907921:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2908330-2908474:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2908742-2908975:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2909125-2909957:1:exon

robo4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: robo4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X4
translation: MPGYWVLRVYLLWHILVPLEGSWLRLDEFPPRIVHHPSDLVVKADSPASLSCRAEGNPPPVIEWHRNGAPLETNRPGGQSTAIVLPDGNLFFLRVVPGRRGHSDEGVYTCIARNSLGKATSNATLYIAALREEFRAQPSDVEVAVGEPVVMNCTPPKGHPEPNITWKKDGELINRTQERYNILSGRLIIANAQKNDSGVYVCLAWNIVGERESRAGRLSVLEKPVFARKPDDATVKVGGSVQFRCEARGDPMPAVHWSKEQGQLPSGRYEVSPDQTLRIHYITALDSGRYTCTATNQVGSTSVSASLAVQEVLDTGQRDLHKELSVLRVHLENITVHPLLSNTVHILWKVQSEPHHLSGFEVLYRSLMPASSDWTERKFPVQRSAVIGPLKRGYKYEFKVRPFAGGLYGQESNTKHLRIPEQVPSAPPLGVAVTMSSENNGTVLVSWEPPPHEAHNGIIQSYQVWCVRSGGQLSSNWTVDSGTHSLEITALDSDTQYWISVAAINGAGVGQLSEPHLLFMEPTMEAAAPPPLDTGPLDQVLRVLRGPVFIGSAGALLWLALMVTAVCLYRRHGRQARLKHAHHTSASLYRMASEDLIIRHRMAAPDSPWSSSAWKSAPCSERYPGLWAQSKENPGFRKTTLPKNKKDPCPPDTAVPIVPDNCGLYGTFYVDLSGVGLRTFSSPTRSPKVPHPGAKTPDVARFSQPVFKSSTNGEGQRLPWKQALPAQPNMGVLKESWEKNYKRELHAVNSAPLVPTWQCSELLKSAPRASVARVCHIAKGGLPVGSKSASSPKILHYSASLRMIDVLPAPPPFPELEDDTQSLSSEEDSSKSTKLTVEGGSVLLGGAAPGPQELPARDDPSYLTLSYSRLSTASFSLSLDEQNDGPLTAEEVEQYLELRHEAEDCSSLLSVSPPSLPHPFSPTPTFGYICGPMPCDLDAEDLADDLAVPGSRQLRPRGGTLRRCPTSSPCCSEWEGSMWNGWGSISEGNAPSARASLISSSDGSFMNDANFARVLAVAAETLGGGAFSGRRGVHTGRGVISLCEDTLEKRK
SIO_010081: robo4
subclass of: SO_0000673
so part of: robo4
location: join(2898954..2899014,2901623..2901946,2903042..2903199,2903428..2903548,2903664..2903802,2903902..2904029,2904169..2904284,2904408..2904627,2904875..2904996,2905264..2905435,2905667..2905864,2906510..2906552,2906844..2906959,2907322..2907633,2907814..2907921,2908330..2908474,2908742..2908975,2909125..2909563)
location: region:2898954-2909563:1
so has part: feature:2898954-2899014:1:exon
so has part: feature:2901623-2901946:1:exon
so has part: feature:2903042-2903199:1:exon
so has part: feature:2903428-2903548:1:exon
so has part: feature:2903664-2903802:1:exon
so has part: feature:2903902-2904029:1:exon
so has part: feature:2904169-2904284:1:exon
so has part: feature:2904408-2904627:1:exon
so has part: feature:2904875-2904996:1:exon
so has part: feature:2905264-2905435:1:exon
so has part: feature:2905667-2905864:1:exon
so has part: feature:2906510-2906552:1:exon
so has part: feature:2906844-2906959:1:exon
so has part: feature:2907322-2907633:1:exon
so has part: feature:2907814-2907921:1:exon
so has part: feature:2908330-2908474:1:exon
so has part: feature:2908742-2908975:1:exon
so has part: feature:2909125-2909563:1:exon

XP_041090909.1
type: Protein
SIO_000068: ncbiprotein

position:2898954:1
position: 2898954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2898954-2899014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2901623-2901946:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2903042-2903199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2903428-2903548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2903664-2903802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2903902-2904029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2904169-2904284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2904408-2904627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2904875-2904996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2905264-2905435:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2905667-2905864:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2906510-2906552:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2906844-2906959:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2907322-2907633:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2907814-2907921:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2908330-2908474:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2908742-2908975:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2909125-2909563:1:exon

LOC121303956
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2911087..2944554)
location: region:2911087-2944554:-1
so has part: feature:2911087-2944554:-1:exon
subclass of: SO_0000010

121303956
type: Gene
SIO_000068: ncbigene

position:2911087:-1
position: 2911087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2944554:-1
position: 2944554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2911087-2944554:-1:exon

LOC121303956
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303956
product: roundabout homolog 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041234858.1
SIO_010081: LOC121303956
subclass of: SO_0000673
so part of: LOC121303956
location: complement(join(2911087..2911092,2911734..2911858,2915200..2915211,2915767..2915894,2916403..2916541,2916901..2917021,2917182..2917339,2930657..2930983,2943994..2944554))
location: region:2911087-2944554:-1
so has part: feature:2943994-2944554:-1:exon
so has part: feature:2930657-2930983:-1:exon
so has part: feature:2917182-2917339:-1:exon
so has part: feature:2916901-2917021:-1:exon
so has part: feature:2916403-2916541:-1:exon
so has part: feature:2915767-2915894:-1:exon
so has part: feature:2915200-2915211:-1:exon
so has part: feature:2911734-2911858:-1:exon
so has part: feature:2911087-2911092:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2943994-2944554:-1:exon

position:2943994:-1
position: 2943994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2930657-2930983:-1:exon

position:2930657:-1
position: 2930657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2930983:-1
position: 2930983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2917182-2917339:-1:exon

position:2917182:-1
position: 2917182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2917339:-1
position: 2917339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2916901-2917021:-1:exon

position:2916901:-1
position: 2916901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2917021:-1
position: 2917021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2916403-2916541:-1:exon

position:2916403:-1
position: 2916403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2916541:-1
position: 2916541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2915767-2915894:-1:exon

position:2915767:-1
position: 2915767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2915894:-1
position: 2915894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2915200-2915211:-1:exon

position:2915200:-1
position: 2915200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2915211:-1
position: 2915211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2911734-2911858:-1:exon

position:2911734:-1
position: 2911734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2911858:-1
position: 2911858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2911087-2911092:-1:exon

position:2911092:-1
position: 2911092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121303956
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 2-like
translation: MVFQLTRGALPFVVAFICSALGSRPRQDDFAPRIAEHPSDLIVSKGEPATLNCKAEGRPLPMVEWYKDGERVETDRDDPRSHRMLLPSGSLFFLRIVHGRRSKPDEGVYVCVARNYLGESVSRNASLEVAILRDDFRQAPSDVVVAAGEPAVMECLPPRGHPEPTISWKKNNVKVTDKEERITIRGGKLMISNTRKSDAGMYVCVGTNMVGERDSDPAELVVFERPVFVRRPVNQVVLSDETVEFMCEVQGDPTPTARWRKEEGELPRGRFEIRSDNRLQITQVHAEDEGTYTCLAENSVGKAEVSGTLQVHVGSFLPPQIVIRPRDQIVAQGRTVTFLCGTKGNPPPAVFWQKEGSQF
SIO_010081: LOC121303956
subclass of: SO_0000673
so part of: LOC121303956
location: complement(join(2911087..2911092,2911734..2911858,2915200..2915211,2915767..2915894,2916403..2916541,2916901..2917021,2917182..2917339,2930657..2930983,2943994..2944057))
location: region:2911087-2944057:-1
so has part: feature:2943994-2944057:-1:exon
so has part: feature:2930657-2930983:-1:exon
so has part: feature:2917182-2917339:-1:exon
so has part: feature:2916901-2917021:-1:exon
so has part: feature:2916403-2916541:-1:exon
so has part: feature:2915767-2915894:-1:exon
so has part: feature:2915200-2915211:-1:exon
so has part: feature:2911734-2911858:-1:exon
so has part: feature:2911087-2911092:-1:exon

XP_041090792.1
type: Protein
SIO_000068: ncbiprotein

position:2944057:-1
position: 2944057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2943994-2944057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2930657-2930983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2917182-2917339:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2916901-2917021:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2916403-2916541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2915767-2915894:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2915200-2915211:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2911734-2911858:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2911087-2911092:-1:exon

LOC121304028
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304028
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3041329..3084356
location: region:3041329-3084356:1
so has part: feature:3041329-3084356:1:exon
subclass of: SO_0000010

121304028
type: Gene
SIO_000068: ncbigene

position:3041329:1
position: 3041329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3084356:1
position: 3084356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3041329-3084356:1:exon

LOC121304028
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304028
product: protein turtle homolog B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_041234971.1
SIO_010081: LOC121304028
subclass of: SO_0000673
so part of: LOC121304028
location: join(3041329..3041620,3065550..3065747,3071501..3071650,3084118..3084356)
location: region:3041329-3084356:1
so has part: feature:3041329-3041620:1:exon
so has part: feature:3065550-3065747:1:exon
so has part: feature:3071501-3071650:1:exon
so has part: feature:3084118-3084356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3041329-3041620:1:exon

position:3041620:1
position: 3041620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3065550-3065747:1:exon

position:3065550:1
position: 3065550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3065747:1
position: 3065747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3071501-3071650:1:exon

position:3071501:1
position: 3071501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3071650:1
position: 3071650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3084118-3084356:1:exon

position:3084118:1
position: 3084118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121304028
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304028
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein turtle homolog B-like
translation: MIWYVATLIASVISTHKTAAQGAHAAREEPQFVTALAGDSVILGCDVVHPLTGQQPPYVVEWFKFGIPIPIFIKFGFYLPHVDPEYAGRASLHDKASLRIEQVRSEDQGWYECKVLLLLDQQYDTFHNGSWVHLTVNAPPTFTETPPQYVEAKEGGSITLTCTAFGNPNPIVSWLREGQLLGDDAKYKVGRSPSVTQLLYLTNSNRSEQFV
SIO_010081: LOC121304028
subclass of: SO_0000673
so part of: LOC121304028
location: join(3041557..3041620,3065550..3065747,3071501..3071650,3084118..3084341)
location: region:3041557-3084341:1
so has part: feature:3041557-3041620:1:exon
so has part: feature:3065550-3065747:1:exon
so has part: feature:3071501-3071650:1:exon
so has part: feature:3084118-3084341:1:exon

XP_041090905.1
type: Protein
SIO_000068: ncbiprotein

position:3041557:1
position: 3041557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3084341:1
position: 3084341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3041557-3041620:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3065550-3065747:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3071501-3071650:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3084118-3084341:1:exon

LOC121304035
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3098064..>3109940)
location: region:3098064-3109940:-1
so has part: feature:3098064-3109940:-1:exon
subclass of: SO_0000010

121304035
type: Gene
SIO_000068: ncbigene

position:3098064:-1
position: 3098064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3109940:-1
position: 3109940
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3098064-3109940:-1:exon

LOC121304035
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304035
product: protein turtle homolog B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041234985.1
SIO_010081: LOC121304035
subclass of: SO_0000673
so part of: LOC121304035
location: complement(join(3098064..3099604,3100568..3100692,3103176..3104837,3109834..>3109940))
location: region:3098064-3109940:-1
so has part: feature:3109834-3109940:-1:exon
so has part: feature:3103176-3104837:-1:exon
so has part: feature:3100568-3100692:-1:exon
so has part: feature:3098064-3099604:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3109834-3109940:-1:exon

position:3109834:-1
position: 3109834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3103176-3104837:-1:exon

position:3103176:-1
position: 3103176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3104837:-1
position: 3104837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3100568-3100692:-1:exon

position:3100568:-1
position: 3100568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3100692:-1
position: 3100692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3098064-3099604:-1:exon

position:3099604:-1
position: 3099604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121304035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein turtle homolog B-like
translation: YFLFHRRTPLTPLPGSEPCWEGRDGNSYRLPHSSPLSSSGKVSPESVRTLRALSESSEDGQTLQGKKMLSPGKEKELSLYKKTKRAITSKKYSVSKHEAEAEATTPIELISRGPDGRFVMDPTEMEPSIKQRRIEGFPFVEESDLYPEFRQSDEENDDPGLMPPAVAALKSQHSPISSSQESYLQPPAYSPRFQRPMEGMGMVESSRLQATGQIRAPHHQGFPHGQFYSYLGSPDPPPPFYMPDVSPLSSVMSSPPLMPERPFGHPTILEESGEGEMPHYTASSSTLPLTHTPTSGQSPELWRRPDLPLRSLEGPSLVFPPHHPVHLHHYARRELPEPPLQPPHPRGTLPVIPSYPGILQLEAPKSRPGKSPSKVKPTASSGTTAKHLPMQQAQSQGQLRHTSNGMGVPVLPYPDPAAHMWGPGSTSTFSGLDTRWYEPRPQLSPRQGRRVDPSLHQVVLQPSRLSPLTQSPLSSHEGSPELVVRPRPRPGLIQPPIPPEMSEITLQPPSGVRFPRTSSPTSSPAQGSRRPSPSYRPQIAFATTATSYPSQSPSPPMESSDIFGQMLSQRRTEEEILPSESSPPQLSSSGKRFVASSGAAAASERFEALRYQRIKKPKRVPNGTPKSRKKTTGPSSQTQQLHASQVLQLEEALYLRKNKKRQPRQDPYARFSALLYRRQPEDQKAILASMDTADPNHATLL
SIO_010081: LOC121304035
subclass of: SO_0000673
so part of: LOC121304035
location: complement(join(3099393..3099604,3100568..3100692,3103176..3104837,3109834..>3109940))
location: region:3099393-3109940:-1
so has part: feature:3109834-3109940:-1:exon
so has part: feature:3103176-3104837:-1:exon
so has part: feature:3100568-3100692:-1:exon
so has part: feature:3099393-3099604:-1:exon

XP_041090919.1
type: Protein
SIO_000068: ncbiprotein

position:3099393:-1
position: 3099393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3109834-3109940:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3103176-3104837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3100568-3100692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3099393-3099604:-1:exon

LOC121304005
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3185765..3260714
location: region:3185765-3260714:1
so has part: feature:3185765-3260714:1:exon
subclass of: SO_0000010

121304005
type: Gene
SIO_000068: ncbigene

position:3185765:1
position: 3185765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3260714:1
position: 3260714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3185765-3260714:1:exon

LOC121304005
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304005
product: protein Aster-B-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041234928.1
SIO_010081: LOC121304005
subclass of: SO_0000673
so part of: LOC121304005
location: join(3185765..3186380,3192429..3193569,3202928..3203005,3242648..3242858,3248028..3248048,3249492..3249515,3256422..3256506,3256933..3257036,3258460..3258555,3258795..3258875,3259413..3259528,3260247..3260714)
location: region:3185765-3260714:1
so has part: feature:3185765-3186380:1:exon
so has part: feature:3192429-3193569:1:exon
so has part: feature:3202928-3203005:1:exon
so has part: feature:3242648-3242858:1:exon
so has part: feature:3248028-3248048:1:exon
so has part: feature:3249492-3249515:1:exon
so has part: feature:3256422-3256506:1:exon
so has part: feature:3256933-3257036:1:exon
so has part: feature:3258460-3258555:1:exon
so has part: feature:3258795-3258875:1:exon
so has part: feature:3259413-3259528:1:exon
so has part: feature:3260247-3260714:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3185765-3186380:1:exon

position:3186380:1
position: 3186380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3192429-3193569:1:exon

position:3192429:1
position: 3192429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3193569:1
position: 3193569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3202928-3203005:1:exon

position:3202928:1
position: 3202928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3203005:1
position: 3203005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3242648-3242858:1:exon

position:3242648:1
position: 3242648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3242858:1
position: 3242858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3248028-3248048:1:exon

position:3248028:1
position: 3248028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3248048:1
position: 3248048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3249492-3249515:1:exon

position:3249492:1
position: 3249492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3249515:1
position: 3249515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3256422-3256506:1:exon

position:3256422:1
position: 3256422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3256506:1
position: 3256506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3256933-3257036:1:exon

position:3256933:1
position: 3256933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3257036:1
position: 3257036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3258460-3258555:1:exon

position:3258460:1
position: 3258460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3258555:1
position: 3258555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3258795-3258875:1:exon

position:3258795:1
position: 3258795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3258875:1
position: 3258875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3259413-3259528:1:exon

position:3259413:1
position: 3259413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3259528:1
position: 3259528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3260247-3260714:1:exon

position:3260247:1
position: 3260247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121304005
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304005
product: protein Aster-B-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041234926.1
SIO_010081: LOC121304005
subclass of: SO_0000673
so part of: LOC121304005
location: join(3185766..3186380,3192429..3193569,3202928..3203005,3210725..3210751,3242648..3242858,3248028..3248048,3249492..3249515,3256422..3256506,3256933..3257036,3258460..3258555,3258795..3258875,3259413..3259528,3260247..3260714)
location: region:3185766-3260714:1
so has part: feature:3185766-3186380:1:exon
so has part: feature:3192429-3193569:1:exon
so has part: feature:3202928-3203005:1:exon
so has part: feature:3210725-3210751:1:exon
so has part: feature:3242648-3242858:1:exon
so has part: feature:3248028-3248048:1:exon
so has part: feature:3249492-3249515:1:exon
so has part: feature:3256422-3256506:1:exon
so has part: feature:3256933-3257036:1:exon
so has part: feature:3258460-3258555:1:exon
so has part: feature:3258795-3258875:1:exon
so has part: feature:3259413-3259528:1:exon
so has part: feature:3260247-3260714:1:exon

position:3185766:1
position: 3185766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3185766-3186380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3192429-3193569:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3202928-3203005:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3210725-3210751:1:exon

position:3210725:1
position: 3210725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3210751:1
position: 3210751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3242648-3242858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3248028-3248048:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3249492-3249515:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3256422-3256506:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3256933-3257036:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3258460-3258555:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3258795-3258875:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3259413-3259528:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3260247-3260714:1:exon

LOC121304005
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304005
product: protein Aster-B-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041234929.1
SIO_010081: LOC121304005
subclass of: SO_0000673
so part of: LOC121304005
location: join(3185769..3186380,3192429..3193569,3202928..3203005,3242648..3242858,3248028..3248048,3256422..3256506,3256933..3257036,3258460..3258555,3258795..3258875,3259413..3259528,3260247..3260714)
location: region:3185769-3260714:1
so has part: feature:3185769-3186380:1:exon
so has part: feature:3192429-3193569:1:exon
so has part: feature:3202928-3203005:1:exon
so has part: feature:3242648-3242858:1:exon
so has part: feature:3248028-3248048:1:exon
so has part: feature:3256422-3256506:1:exon
so has part: feature:3256933-3257036:1:exon
so has part: feature:3258460-3258555:1:exon
so has part: feature:3258795-3258875:1:exon
so has part: feature:3259413-3259528:1:exon
so has part: feature:3260247-3260714:1:exon

position:3185769:1
position: 3185769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3185769-3186380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3192429-3193569:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3202928-3203005:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3242648-3242858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3248028-3248048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3256422-3256506:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3256933-3257036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3258460-3258555:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3258795-3258875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3259413-3259528:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3260247-3260714:1:exon

LOC121304005
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304005
product: protein Aster-B-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_041234927.1
SIO_010081: LOC121304005
subclass of: SO_0000673
so part of: LOC121304005
location: join(3185770..3186380,3192429..3193569,3202928..3203005,3210725..3210751,3242648..3242858,3248028..3248048,3256422..3256506,3256933..3257036,3258460..3258555,3258795..3258875,3259413..3259528,3260247..3260714)
location: region:3185770-3260714:1
so has part: feature:3185770-3186380:1:exon
so has part: feature:3192429-3193569:1:exon
so has part: feature:3202928-3203005:1:exon
so has part: feature:3210725-3210751:1:exon
so has part: feature:3242648-3242858:1:exon
so has part: feature:3248028-3248048:1:exon
so has part: feature:3256422-3256506:1:exon
so has part: feature:3256933-3257036:1:exon
so has part: feature:3258460-3258555:1:exon
so has part: feature:3258795-3258875:1:exon
so has part: feature:3259413-3259528:1:exon
so has part: feature:3260247-3260714:1:exon

position:3185770:1
position: 3185770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3185770-3186380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3192429-3193569:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3202928-3203005:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3210725-3210751:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3242648-3242858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3248028-3248048:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3256422-3256506:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3256933-3257036:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3258460-3258555:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3258795-3258875:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3259413-3259528:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3260247-3260714:1:exon

LOC121304005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Aster-B-like isoform X1
translation: MSEALQLPALHVQVSDDCSSNGSATLAGTIAWSSSSTPTLRRKRFKMRRMKNVLSEKEQLGNGELRRGCSGSKEYLQLPSIEITPSSDEEAPWSNCSTPSASPRRKRFLLKKWLKVREKKGHGSESSSQQSSQQSSHDDDPTRFLTPFSREEKSDSGAEKFSTASNSNRSTPACSPILRKRSRSPTPQSVEGENMVEKGSDHSSDKSPSTPEQGVQRSYSSQSGRSGGKNSKKSQSWYNHERQHIMRVLSPTYKQRNEDFRKLFKQLPDTERLIVDYSCALQKDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICYMTKEKTARLIPNAIQVCTDTEKHFFTSFGARDRTYMMMFRLWQNALLDKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDFNTMGYCEEIPTEDNEVNDSSSKSSIEVKPDASPQLHKKSVTNSTLTLTGSSEALVSVSAGAERAWLSYPKVFKSYCHSLTSVTLNSLIID
SIO_010081: LOC121304005
subclass of: SO_0000673
so part of: LOC121304005
location: join(3193190..3193569,3202928..3203005,3210725..3210751,3242648..3242858,3248028..3248048,3249492..3249515,3256422..3256506,3256933..3257036,3258460..3258555,3258795..3258875,3259413..3259528,3260247..3260508)
location: region:3193190-3260508:1
so has part: feature:3193190-3193569:1:exon
so has part: feature:3202928-3203005:1:exon
so has part: feature:3210725-3210751:1:exon
so has part: feature:3242648-3242858:1:exon
so has part: feature:3248028-3248048:1:exon
so has part: feature:3249492-3249515:1:exon
so has part: feature:3256422-3256506:1:exon
so has part: feature:3256933-3257036:1:exon
so has part: feature:3258460-3258555:1:exon
so has part: feature:3258795-3258875:1:exon
so has part: feature:3259413-3259528:1:exon
so has part: feature:3260247-3260508:1:exon

XP_041090860.1
type: Protein
SIO_000068: ncbiprotein

position:3193190:1
position: 3193190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3260508:1
position: 3260508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3193190-3193569:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3202928-3203005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3210725-3210751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3242648-3242858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3248028-3248048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3249492-3249515:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3256422-3256506:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3256933-3257036:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3258460-3258555:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3258795-3258875:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3259413-3259528:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3260247-3260508:1:exon

LOC121304005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Aster-B-like isoform X2
translation: MSEALQLPALHVQVSDDCSSNGSATLAGTIAWSSSSTPTLRRKRFKMRRMKNVLSEKEQLGNGELRRGCSGSKEYLQLPSIEITPSSDEEAPWSNCSTPSASPRRKRFLLKKWLKVREKKGHGSESSSQQSSQQSSHDDDPTRFLTPFSREEKSDSGAEKFSTASNSNRSTPACSPILRKRSRSPTPQSVEGENMVEKGSDHSSDKSPSTPEQGVQRSYSSQSGRSGGKNSKKSQSWYNVLSPTYKQRNEDFRKLFKQLPDTERLIVDYSCALQKDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICYMTKEKTARLIPNAIQVCTDTEKHFFTSFGARDRTYMMMFRLWQNALLDKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDFNTMGYCEEIPTEDNEVNDSSSKSSIEVKPDASPQLHKKSVTNSTLTLTGSSEALVSVSAGAERAWLSYPKVFKSYCHSLTSVTLNSLIID
SIO_010081: LOC121304005
subclass of: SO_0000673
so part of: LOC121304005
location: join(3193190..3193569,3202928..3203005,3210725..3210751,3242648..3242858,3248028..3248048,3256422..3256506,3256933..3257036,3258460..3258555,3258795..3258875,3259413..3259528,3260247..3260508)
location: region:3193190-3260508:1
so has part: feature:3193190-3193569:1:exon
so has part: feature:3202928-3203005:1:exon
so has part: feature:3210725-3210751:1:exon
so has part: feature:3242648-3242858:1:exon
so has part: feature:3248028-3248048:1:exon
so has part: feature:3256422-3256506:1:exon
so has part: feature:3256933-3257036:1:exon
so has part: feature:3258460-3258555:1:exon
so has part: feature:3258795-3258875:1:exon
so has part: feature:3259413-3259528:1:exon
so has part: feature:3260247-3260508:1:exon

XP_041090861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3193190-3193569:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3202928-3203005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3210725-3210751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3242648-3242858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3248028-3248048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3256422-3256506:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3256933-3257036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3258460-3258555:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3258795-3258875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3259413-3259528:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3260247-3260508:1:exon

LOC121304005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Aster-B-like isoform X3
translation: MSEALQLPALHVQVSDDCSSNGSATLAGTIAWSSSSTPTLRRKRFKMRRMKNVLSEKEQLGNGELRRGCSGSKEYLQLPSIEITPSSDEEAPWSNCSTPSASPRRKRFLLKKWLKVREKKGHGSESSSQQSSQQSSHDDDPTRFLTPFSREENTASNSNRSTPACSPILRKRSRSPTPQSVEGENMVEKGSDHSSDKSPSTPEQGVQRSYSSQSGRSGGKNSKKSQSWYNHERQHIMRVLSPTYKQRNEDFRKLFKQLPDTERLIVDYSCALQKDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICYMTKEKTARLIPNAIQVCTDTEKHFFTSFGARDRTYMMMFRLWQNALLDKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDFNTMGYCEEIPTEDNEVNDSSSKSSIEVKPDASPQLHKKSVTNSTLTLTGSSEALVSVSAGAERAWLSYPKVFKSYCHSLTSVTLNSLIID
SIO_010081: LOC121304005
subclass of: SO_0000673
so part of: LOC121304005
location: join(3193190..3193569,3202928..3203005,3242648..3242858,3248028..3248048,3249492..3249515,3256422..3256506,3256933..3257036,3258460..3258555,3258795..3258875,3259413..3259528,3260247..3260508)
location: region:3193190-3260508:1
so has part: feature:3193190-3193569:1:exon
so has part: feature:3202928-3203005:1:exon
so has part: feature:3242648-3242858:1:exon
so has part: feature:3248028-3248048:1:exon
so has part: feature:3249492-3249515:1:exon
so has part: feature:3256422-3256506:1:exon
so has part: feature:3256933-3257036:1:exon
so has part: feature:3258460-3258555:1:exon
so has part: feature:3258795-3258875:1:exon
so has part: feature:3259413-3259528:1:exon
so has part: feature:3260247-3260508:1:exon

XP_041090862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3193190-3193569:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3202928-3203005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3242648-3242858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3248028-3248048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3249492-3249515:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3256422-3256506:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3256933-3257036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3258460-3258555:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3258795-3258875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3259413-3259528:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3260247-3260508:1:exon

LOC121304005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Aster-B-like isoform X4
translation: MSEALQLPALHVQVSDDCSSNGSATLAGTIAWSSSSTPTLRRKRFKMRRMKNVLSEKEQLGNGELRRGCSGSKEYLQLPSIEITPSSDEEAPWSNCSTPSASPRRKRFLLKKWLKVREKKGHGSESSSQQSSQQSSHDDDPTRFLTPFSREENTASNSNRSTPACSPILRKRSRSPTPQSVEGENMVEKGSDHSSDKSPSTPEQGVQRSYSSQSGRSGGKNSKKSQSWYNVLSPTYKQRNEDFRKLFKQLPDTERLIVDYSCALQKDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICYMTKEKTARLIPNAIQVCTDTEKHFFTSFGARDRTYMMMFRLWQNALLDKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDFNTMGYCEEIPTEDNEVNDSSSKSSIEVKPDASPQLHKKSVTNSTLTLTGSSEALVSVSAGAERAWLSYPKVFKSYCHSLTSVTLNSLIID
SIO_010081: LOC121304005
subclass of: SO_0000673
so part of: LOC121304005
location: join(3193190..3193569,3202928..3203005,3242648..3242858,3248028..3248048,3256422..3256506,3256933..3257036,3258460..3258555,3258795..3258875,3259413..3259528,3260247..3260508)
location: region:3193190-3260508:1
so has part: feature:3193190-3193569:1:exon
so has part: feature:3202928-3203005:1:exon
so has part: feature:3242648-3242858:1:exon
so has part: feature:3248028-3248048:1:exon
so has part: feature:3256422-3256506:1:exon
so has part: feature:3256933-3257036:1:exon
so has part: feature:3258460-3258555:1:exon
so has part: feature:3258795-3258875:1:exon
so has part: feature:3259413-3259528:1:exon
so has part: feature:3260247-3260508:1:exon

XP_041090863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3193190-3193569:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3202928-3203005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3242648-3242858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3248028-3248048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3256422-3256506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3256933-3257036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3258460-3258555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3258795-3258875:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3259413-3259528:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3260247-3260508:1:exon

LOC121303957
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3260547..3264856)
location: region:3260547-3264856:-1
so has part: feature:3260547-3264856:-1:exon
subclass of: SO_0000010

121303957
type: Gene
SIO_000068: ncbigene

position:3260547:-1
position: 3260547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3264856:-1
position: 3264856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3260547-3264856:-1:exon

LOC121303957
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303957
product: scavenger receptor class F member 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041234859.1
SIO_010081: LOC121303957
subclass of: SO_0000673
so part of: LOC121303957
location: complement(join(3260547..3260605,3261227..3261268,3261535..3261671,3262547..3262739,3262839..3262949,3263230..3263421,3263967..3264068,3264473..3264856))
location: region:3260547-3264856:-1
so has part: feature:3264473-3264856:-1:exon
so has part: feature:3263967-3264068:-1:exon
so has part: feature:3263230-3263421:-1:exon
so has part: feature:3262839-3262949:-1:exon
so has part: feature:3262547-3262739:-1:exon
so has part: feature:3261535-3261671:-1:exon
so has part: feature:3261227-3261268:-1:exon
so has part: feature:3260547-3260605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3264473-3264856:-1:exon

position:3264473:-1
position: 3264473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3263967-3264068:-1:exon

position:3263967:-1
position: 3263967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3264068:-1
position: 3264068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3263230-3263421:-1:exon

position:3263230:-1
position: 3263230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3263421:-1
position: 3263421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3262839-3262949:-1:exon

position:3262839:-1
position: 3262839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3262949:-1
position: 3262949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3262547-3262739:-1:exon

position:3262547:-1
position: 3262547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3262739:-1
position: 3262739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3261535-3261671:-1:exon

position:3261535:-1
position: 3261535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3261671:-1
position: 3261671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3261227-3261268:-1:exon

position:3261227:-1
position: 3261227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3261268:-1
position: 3261268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3260547-3260605:-1:exon

position:3260605:-1
position: 3260605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121303957
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scavenger receptor class F member 1-like
translation: MPNPWEGGGRVRSPAAVDSVSCRPGTYRNSEESPDCLLCPLGYFCPWGTAVRCPAGTYGAKEGLQREQDCSVCPAGFYCLEGSSRRPGSESLCPRGYYCEAGTSEPHISPCPPGTFGEHFGQTSVAGCKRCAEGRFCPEGAADPGWPCARGRFCPAGTVKEVNCPGGTYTQQQGAASLNECLKCPTGFYCPEGTSDPLPCPRGMFNPLQGQDDATDCRLCYAGKACTQMALPQPDVDCMEGFTCPPGSSRPNALENACPPGTFSNLNNLTDRSQCGLCPPRHACVRGTGGTQRPPVPCFAGVAPLPYIELPNPKRIRSK
SIO_010081: LOC121303957
subclass of: SO_0000673
so part of: LOC121303957
location: complement(join(3260547..3260605,3261227..3261268,3261535..3261671,3262547..3262739,3262839..3262949,3263230..3263421,3263967..3264068,3264473..3264596))
location: region:3260547-3264596:-1
so has part: feature:3264473-3264596:-1:exon
so has part: feature:3263967-3264068:-1:exon
so has part: feature:3263230-3263421:-1:exon
so has part: feature:3262839-3262949:-1:exon
so has part: feature:3262547-3262739:-1:exon
so has part: feature:3261535-3261671:-1:exon
so has part: feature:3261227-3261268:-1:exon
so has part: feature:3260547-3260605:-1:exon

XP_041090793.1
type: Protein
SIO_000068: ncbiprotein

position:3264596:-1
position: 3264596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3264473-3264596:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3263967-3264068:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3263230-3263421:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3262839-3262949:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3262547-3262739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3261535-3261671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3261227-3261268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3260547-3260605:-1:exon

LOC121303980
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303980
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3265787..3267510)
location: region:3265787-3267510:-1
so has part: feature:3265787-3267510:-1:exon
subclass of: SO_0000011

121303980
type: Gene
SIO_000068: ncbigene

position:3265787:-1
position: 3265787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3267510:-1
position: 3267510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3265787-3267510:-1:exon

LOC121303980
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: lncRNA
gene: LOC121303980
product: uncharacterized LOC121303980
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005947897.1
SIO_010081: LOC121303980
subclass of: SO_0000673
so part of: LOC121303980
location: complement(join(3265787..3265885,3266219..3266407,3267128..3267218,3267409..3267510))
location: region:3265787-3267510:-1
so has part: feature:3267409-3267510:-1:exon
so has part: feature:3267128-3267218:-1:exon
so has part: feature:3266219-3266407:-1:exon
so has part: feature:3265787-3265885:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3267409-3267510:-1:exon

position:3267409:-1
position: 3267409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3267128-3267218:-1:exon

position:3267128:-1
position: 3267128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3267218:-1
position: 3267218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3266219-3266407:-1:exon

position:3266219:-1
position: 3266219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3266407:-1
position: 3266407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3265787-3265885:-1:exon

position:3265885:-1
position: 3265885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121304053
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304053
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3273428..3280930
location: region:3273428-3280930:1
so has part: feature:3273428-3280930:1:exon
subclass of: SO_0000010

121304053
type: Gene
SIO_000068: ncbigene

position:3273428:1
position: 3273428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3280930:1
position: 3280930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3273428-3280930:1:exon

LOC121304053
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304053
product: uncharacterized LOC121304053, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041235014.1
SIO_010081: LOC121304053
subclass of: SO_0000673
so part of: LOC121304053
location: join(3273428..3273894,3274460..3274783,3275277..3275585,3276049..3276360,3276645..3276752,3277772..3277799,3278475..3278518,3279552..3279602,3279830..3279942,3280066..3280930)
location: region:3273428-3280930:1
so has part: feature:3273428-3273894:1:exon
so has part: feature:3274460-3274783:1:exon
so has part: feature:3275277-3275585:1:exon
so has part: feature:3276049-3276360:1:exon
so has part: feature:3276645-3276752:1:exon
so has part: feature:3277772-3277799:1:exon
so has part: feature:3278475-3278518:1:exon
so has part: feature:3279552-3279602:1:exon
so has part: feature:3279830-3279942:1:exon
so has part: feature:3280066-3280930:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3273428-3273894:1:exon

position:3273894:1
position: 3273894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3274460-3274783:1:exon

position:3274460:1
position: 3274460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3274783:1
position: 3274783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3275277-3275585:1:exon

position:3275277:1
position: 3275277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3275585:1
position: 3275585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3276049-3276360:1:exon

position:3276049:1
position: 3276049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3276360:1
position: 3276360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3276645-3276752:1:exon

position:3276645:1
position: 3276645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3276752:1
position: 3276752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3277772-3277799:1:exon

position:3277772:1
position: 3277772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3277799:1
position: 3277799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3278475-3278518:1:exon

position:3278475:1
position: 3278475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3278518:1
position: 3278518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3279552-3279602:1:exon

position:3279552:1
position: 3279552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3279602:1
position: 3279602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3279830-3279942:1:exon

position:3279830:1
position: 3279830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3279942:1
position: 3279942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3280066-3280930:1:exon

position:3280066:1
position: 3280066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121304053
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304053
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121304053 isoform X1
translation: MQIGLYLCIPARCKEYNKKKVCALAQSPQLNTGLQRMLLFLNLFLWVFSMQGCMVSCLQRSVVHAFVGDSITLNCTYDSTNGWFREYWYDSKAVKQTESRRDCVNISSASSSALRCTLSLTIGKVTARHTPDSYHCMVEDVEAYPLKKWEECKTDLRIQGRPSLPMVTPRGQLIAGRESVLICSTSGFYPSNITLTWLRNGHHMTDRGAEKYLSDNSDGTFNATSSITFTPNVTHHKDLIACQVSHAALSQPLTSNLSLLVKYGPRSVSLGFRTAHQADAQLRAVNSEVIVSTVSSFLELECLVDSYPPAHIDWKRQESNTSWRKILSKELRWTEIQEADMGVYWCFASNSYGEANISVTIVVQKPSGFHLVKLLATMTVTLVVVLAALAIYLYITSKGKWKGQPSLAVSLSPEPDEPVEEKSKESAEYAVIWRGSSVSQEAADSLSIPEVPYADILISGRGCSTPEQRRVPESLCSDDTQDWTNEELGPAHPHSLHVSQLEVTRKLSTSSEYAVINYSSKPCC
SIO_010081: LOC121304053
subclass of: SO_0000673
so part of: LOC121304053
location: join(3273741..3273894,3274460..3274783,3275277..3275585,3276049..3276360,3276645..3276752,3277772..3277799,3278475..3278518,3279552..3279602,3279830..3279942,3280066..3280197)
location: region:3273741-3280197:1
so has part: feature:3273741-3273894:1:exon
so has part: feature:3274460-3274783:1:exon
so has part: feature:3275277-3275585:1:exon
so has part: feature:3276049-3276360:1:exon
so has part: feature:3276645-3276752:1:exon
so has part: feature:3277772-3277799:1:exon
so has part: feature:3278475-3278518:1:exon
so has part: feature:3279552-3279602:1:exon
so has part: feature:3279830-3279942:1:exon
so has part: feature:3280066-3280197:1:exon

XP_041090948.1
type: Protein
SIO_000068: ncbiprotein

position:3273741:1
position: 3273741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3280197:1
position: 3280197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3273741-3273894:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3274460-3274783:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3275277-3275585:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3276049-3276360:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3276645-3276752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3277772-3277799:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3278475-3278518:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3279552-3279602:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3279830-3279942:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3280066-3280197:1:exon

LOC121304053
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304053
product: uncharacterized LOC121304053, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_041235015.1
SIO_010081: LOC121304053
subclass of: SO_0000673
so part of: LOC121304053
location: join(3274312..3274783,3275277..3275585,3276049..3276360,3276645..3276752,3277772..3277799,3278475..3278518,3279552..3279602,3279830..3279942,3280066..3280929)
location: region:3274312-3280929:1
so has part: feature:3274312-3274783:1:exon
so has part: feature:3275277-3275585:1:exon
so has part: feature:3276049-3276360:1:exon
so has part: feature:3276645-3276752:1:exon
so has part: feature:3277772-3277799:1:exon
so has part: feature:3278475-3278518:1:exon
so has part: feature:3279552-3279602:1:exon
so has part: feature:3279830-3279942:1:exon
so has part: feature:3280066-3280929:1:exon

position:3274312:1
position: 3274312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3280929:1
position: 3280929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3274312-3274783:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3275277-3275585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3276049-3276360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3276645-3276752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3277772-3277799:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3278475-3278518:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3279552-3279602:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3279830-3279942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3280066-3280929:1:exon

LOC121304053
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304053
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121304053 isoform X2
translation: MVSCLQRSVVHAFVGDSITLNCTYDSTNGWFREYWYDSKAVKQTESRRDCVNISSASSSALRCTLSLTIGKVTARHTPDSYHCMVEDVEAYPLKKWEECKTDLRIQGRPSLPMVTPRGQLIAGRESVLICSTSGFYPSNITLTWLRNGHHMTDRGAEKYLSDNSDGTFNATSSITFTPNVTHHKDLIACQVSHAALSQPLTSNLSLLVKYGPRSVSLGFRTAHQADAQLRAVNSEVIVSTVSSFLELECLVDSYPPAHIDWKRQESNTSWRKILSKELRWTEIQEADMGVYWCFASNSYGEANISVTIVVQKPSGFHLVKLLATMTVTLVVVLAALAIYLYITSKGKWKGQPSLAVSLSPEPDEPVEEKSKESAEYAVIWRGSSVSQEAADSLSIPEVPYADILISGRGCSTPEQRRVPESLCSDDTQDWTNEELGPAHPHSLHVSQLEVTRKLSTSSEYAVINYSSKPCC
SIO_010081: LOC121304053
subclass of: SO_0000673
so part of: LOC121304053
location: join(3274465..3274783,3275277..3275585,3276049..3276360,3276645..3276752,3277772..3277799,3278475..3278518,3279552..3279602,3279830..3279942,3280066..3280197)
location: region:3274465-3280197:1
so has part: feature:3274465-3274783:1:exon
so has part: feature:3275277-3275585:1:exon
so has part: feature:3276049-3276360:1:exon
so has part: feature:3276645-3276752:1:exon
so has part: feature:3277772-3277799:1:exon
so has part: feature:3278475-3278518:1:exon
so has part: feature:3279552-3279602:1:exon
so has part: feature:3279830-3279942:1:exon
so has part: feature:3280066-3280197:1:exon

XP_041090949.1
type: Protein
SIO_000068: ncbiprotein

position:3274465:1
position: 3274465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3274465-3274783:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3275277-3275585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3276049-3276360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3276645-3276752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3277772-3277799:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3278475-3278518:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3279552-3279602:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3279830-3279942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3280066-3280197:1:exon

LOC121304054
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304054
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3287482..3291256
location: region:3287482-3291256:1
so has part: feature:3287482-3291256:1:exon
subclass of: SO_0000010

121304054
type: Gene
SIO_000068: ncbigene

position:3287482:1
position: 3287482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3291256:1
position: 3291256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3287482-3291256:1:exon

LOC121304054
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121304054
product: tyrosine-protein phosphatase non-receptor type substrate 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041235016.1
SIO_010081: LOC121304054
subclass of: SO_0000673
so part of: LOC121304054
location: join(3287482..3287647,3288678..3289025,3289405..3289716,3290102..3290395,3290581..3291256)
location: region:3287482-3291256:1
so has part: feature:3287482-3287647:1:exon
so has part: feature:3288678-3289025:1:exon
so has part: feature:3289405-3289716:1:exon
so has part: feature:3290102-3290395:1:exon
so has part: feature:3290581-3291256:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3287482-3287647:1:exon

position:3287647:1
position: 3287647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3288678-3289025:1:exon

position:3288678:1
position: 3288678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3289025:1
position: 3289025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3289405-3289716:1:exon

position:3289405:1
position: 3289405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3289716:1
position: 3289716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3290102-3290395:1:exon

position:3290102:1
position: 3290102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3290395:1
position: 3290395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3290581-3291256:1:exon

position:3290581:1
position: 3290581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121304054
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121304054
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type substrate 1-like
translation: MLTAVLGLLCVTGLLANELQISQPSHLTVLQGDSVTMNCSFNYTGDNRVYGKWYKRQREGEHHYLDNSSTACVLLQLALLHKVSECVVTIHFPNISFNHSGVYNCKVKIPSSISPVNSEGEGTRLEVYAPPSSVSIYQSAEEVVAGAGFTLTCVARGFYPASVGIEWFHKGALVSSGDKADRHQKHKDGSFSANSHLRLFPKAKDQEMVFTCNVTHVALQTSISRDAHLSVKYPPLNQMVYHRLSPSDRFQPLVGRSLYCPPGSYLELQCIVESEPASLVVWFNISNAVLGNGTNSTATMKRQASDGGVYWCRGSNAYGTVQQEVRVNPESSIPVRMVTYPLFVITVSALLLYRKYGEGKNS
SIO_010081: LOC121304054
subclass of: SO_0000673
so part of: LOC121304054
location: join(3287611..3287647,3288678..3289025,3289405..3289716,3290102..3290395,3290581..3290678)
location: region:3287611-3290678:1
so has part: feature:3287611-3287647:1:exon
so has part: feature:3288678-3289025:1:exon
so has part: feature:3289405-3289716:1:exon
so has part: feature:3290102-3290395:1:exon
so has part: feature:3290581-3290678:1:exon

XP_041090950.1
type: Protein
SIO_000068: ncbiprotein

position:3287611:1
position: 3287611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3290678:1
position: 3290678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3287611-3287647:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3288678-3289025:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3289405-3289716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3290102-3290395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3290581-3290678:1:exon

spa17
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: spa17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3294553..3304278
location: region:3294553-3304278:1
so has part: feature:3294553-3304278:1:exon
subclass of: SO_0000010

121303958
type: Gene
SIO_000068: ncbigene

position:3294553:1
position: 3294553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3304278:1
position: 3304278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3294553-3304278:1:exon

spa17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: spa17
product: sperm autoantigenic protein 17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041234860.1
SIO_010081: spa17
subclass of: SO_0000673
so part of: spa17
location: join(3294553..3294594,3295137..3295326,3295541..3295611,3296130..3296156,3296627..3296748,3299764..3301087,3303610..3303699,3304273..3304278)
location: region:3294553-3304278:1
so has part: feature:3294553-3294594:1:exon
so has part: feature:3295137-3295326:1:exon
so has part: feature:3295541-3295611:1:exon
so has part: feature:3296130-3296156:1:exon
so has part: feature:3296627-3296748:1:exon
so has part: feature:3299764-3301087:1:exon
so has part: feature:3303610-3303699:1:exon
so has part: feature:3304273-3304278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3294553-3294594:1:exon

position:3294594:1
position: 3294594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3295137-3295326:1:exon

position:3295137:1
position: 3295137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3295326:1
position: 3295326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3295541-3295611:1:exon

position:3295541:1
position: 3295541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3295611:1
position: 3295611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3296130-3296156:1:exon

position:3296130:1
position: 3296130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3296156:1
position: 3296156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3296627-3296748:1:exon

position:3296627:1
position: 3296627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3296748:1
position: 3296748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3299764-3301087:1:exon

position:3299764:1
position: 3299764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3301087:1
position: 3301087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3303610-3303699:1:exon

position:3303610:1
position: 3303610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3303699:1
position: 3303699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3304273-3304278:1:exon

position:3304273:1
position: 3304273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

spa17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: spa17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm surface protein Sp17
translation: MSVPFSNTSLRVPRGFGNVLQGLAREVLREQPKDIPAFAAQYFRGLLLEREKSGIDPVEWGAAIEDRFYNNQAFKSDSHLLSGEAGEQMDFDSPDKEEAIIKIQASYRGYAVRQTLKKSATSENEDTSSKDKEPVDTELIEAACAATTSTANLNICAEELDIGLMGGGEADDPANRDVCATELGQEPSLDLLFAGIADKDICGEELQIHPVTEPEGSAQETLESAAKEEAATGAGESVIEEGDHATEDHKTPRKVQTGDQPSEESMVQAEADPAATVNEAKAEEDQGQQAETAMEAEPEIEAQPVMEDLQDEVSSAAPVDATQPIDQAEQHSEIEVCENETTETQLKTEAEATIDAKAQNGSAEKEEEKELVKDTEEEAGDQDVKQEKEDPDGGDTVRASLETEEADGKDQAPAEETEDQSDYKAETEEEIREAESENTEKDLQEEQTEVPVEETEIRSEDKAEEPVEQTEVPGEETEIRSEDTSEEPVEEALAERLEGEADESKNEGKELHEEDEEETEGPAEQTEVAQSEDKAGNEGAVDKAEEVGHEREAEEKENTEADIDNTPPLWVSSECAEGIQGHIVPTDTITCPHDEND
SIO_010081: spa17
subclass of: SO_0000673
so part of: spa17
location: join(3295173..3295326,3295541..3295611,3296130..3296156,3296627..3296748,3299764..3301087,3303610..3303699,3304273..3304278)
location: region:3295173-3304278:1
so has part: feature:3295173-3295326:1:exon
so has part: feature:3295541-3295611:1:exon
so has part: feature:3296130-3296156:1:exon
so has part: feature:3296627-3296748:1:exon
so has part: feature:3299764-3301087:1:exon
so has part: feature:3303610-3303699:1:exon
so has part: feature:3304273-3304278:1:exon

XP_041090794.1
type: Protein
SIO_000068: ncbiprotein

position:3295173:1
position: 3295173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3295173-3295326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3295541-3295611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3296130-3296156:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3296627-3296748:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3299764-3301087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3303610-3303699:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3304273-3304278:1:exon

LOC121303959
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121303959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3304998..3342674)
location: region:3304998-3342674:-1
so has part: feature:3304998-3342674:-1:exon
subclass of: SO_0000010

121303959
type: Gene
SIO_000068: ncbigene

position:3304998:-1
position: 3304998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3342674:-1
position: 3342674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3304998-3342674:-1:exon

LOC121303959
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121303959
product: uncharacterized LOC121303959
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041234861.1
SIO_010081: LOC121303959
subclass of: SO_0000673
so part of: LOC121303959
location: complement(join(3304998..3305102,3312607..3312785,3317199..3317364,3321150..3321247,3323905..3324069,3324425..3324428,3337541..3337678,3338194..3338475,3338717..3338856,3339490..3339555,3342520..3342674))
location: region:3304998-3342674:-1
so has part: feature:3342520-3342674:-1:exon
so has part: feature:3339490-3339555:-1:exon
so has part: feature:3338717-3338856:-1:exon
so has part: feature:3338194-3338475:-1:exon
so has part: feature:3337541-3337678:-1:exon
so has part: feature:3324425-3324428:-1:exon
so has part: feature:3323905-3324069:-1:exon
so has part: feature:3321150-3321247:-1:exon
so has part: feature:3317199-3317364:-1:exon
so has part: feature:3312607-3312785:-1:exon
so has part: feature:3304998-3305102:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3342520-3342674:-1:exon

position:3342520:-1
position: 3342520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3339490-3339555:-1:exon

position:3339490:-1
position: 3339490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3339555:-1
position: 3339555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3338717-3338856:-1:exon

position:3338717:-1
position: 3338717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3338856:-1
position: 3338856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3338194-3338475:-1:exon

position:3338194:-1
position: 3338194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3338475:-1
position: 3338475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3337541-3337678:-1:exon

position:3337541:-1
position: 3337541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3337678:-1
position: 3337678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3324425-3324428:-1:exon

position:3324425:-1
position: 3324425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3324428:-1
position: 3324428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3323905-3324069:-1:exon

position:3323905:-1
position: 3323905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3324069:-1
position: 3324069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3321150-3321247:-1:exon

position:3321150:-1
position: 3321150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3321247:-1
position: 3321247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3317199-3317364:-1:exon

position:3317199:-1
position: 3317199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3317364:-1
position: 3317364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3312607-3312785:-1:exon

position:3312607:-1
position: 3312607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3312785:-1
position: 3312785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3304998-3305102:-1:exon

position:3305102:-1
position: 3305102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121303959
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121303959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121303959
translation: MVCCRSPAAWLHLVFMLTPNGVLSLDILYPFGLAFRDSETPKMDDGSSTEVPLLIQFIFFNMPYRSIFVNNNGVISFNVQVSQFTPEAFPLTDSRSFIAPFWADVHNGIRGDVYYRESTDPDILQRATLDIRRYYKSSFSASWVFIATWHQVTFYGGSQGTPVNTFQAVLISNGTAFFAMFNYGDISWTTGTASGGDPLTGLGGTAAQDSAILDDPMECSRGERLAITLAKEAINRATDRSVTAKLEVDIFELLRDSEYETGETMCQILSKGVVGVLGPSASPASNSIISNICGEKEVPYLKVAPDDILKVQFQRFTTLNMRPTNTDISMAVTGLLKFFNSTTSCLICAKPECLLNLERLLRQFLISKDTLSVRMLDDSQDPTPLLKEIRDDKTATIIVDANATISHTILERVLQGQEGILLMKLFLDIVNQTPPGVVGDWESDAA
SIO_010081: LOC121303959
subclass of: SO_0000673
so part of: LOC121303959
location: complement(join(3304998..3305102,3312607..3312785,3317199..3317364,3321150..3321247,3323905..3324069,3324425..3324428,3337541..3337678,3338194..3338475,3338717..3338856,3339490..3339553))
location: region:3304998-3339553:-1
so has part: feature:3339490-3339553:-1:exon
so has part: feature:3338717-3338856:-1:exon
so has part: feature:3338194-3338475:-1:exon
so has part: feature:3337541-3337678:-1:exon
so has part: feature:3324425-3324428:-1:exon
so has part: feature:3323905-3324069:-1:exon
so has part: feature:3321150-3321247:-1:exon
so has part: feature:3317199-3317364:-1:exon
so has part: feature:3312607-3312785:-1:exon
so has part: feature:3304998-3305102:-1:exon

XP_041090795.1
type: Protein
SIO_000068: ncbiprotein

position:3339553:-1
position: 3339553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3339490-3339553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3338717-3338856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3338194-3338475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3337541-3337678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3324425-3324428:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3323905-3324069:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3321150-3321247:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3317199-3317364:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3312607-3312785:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3304998-3305102:-1:exon

LOC121304077
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121304077
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3344484..3347370)
location: region:3344484-3347370:-1
so has part: feature:3344484-3347370:-1:exon
subclass of: SO_0000011

121304077
type: Gene
SIO_000068: ncbigene

position:3344484:-1
position: 3344484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3347370:-1
position: 3347370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3344484-3347370:-1:exon

LOC121304077
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: lncRNA
gene: LOC121304077
product: uncharacterized LOC121304077
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_005947914.1
SIO_010081: LOC121304077
subclass of: SO_0000673
so part of: LOC121304077
location: complement(join(3344484..3345368,3345964..3347370))
location: region:3344484-3347370:-1
so has part: feature:3345964-3347370:-1:exon
so has part: feature:3344484-3345368:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3345964-3347370:-1:exon

position:3345964:-1
position: 3345964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3344484-3345368:-1:exon

position:3345368:-1
position: 3345368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tbcelb
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: tbcelb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3347555..3362026)
location: region:3347555-3362026:-1
so has part: feature:3347555-3362026:-1:exon
subclass of: SO_0000010

121304082
type: Gene
SIO_000068: ncbigene

position:3347555:-1
position: 3347555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3362026:-1
position: 3362026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3347555-3362026:-1:exon

tbcelb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: tbcelb
product: tubulin folding cofactor E-like b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_041235052.1
SIO_010081: tbcelb
subclass of: SO_0000673
so part of: tbcelb
location: complement(join(3347555..3348732,3353453..3353569,3353887..3354013,3355930..3356186,3356562..3356743,3356906..3357045,3357322..3357480,3360283..3360339,3361316..3362026))
location: region:3347555-3362026:-1
so has part: feature:3361316-3362026:-1:exon
so has part: feature:3360283-3360339:-1:exon
so has part: feature:3357322-3357480:-1:exon
so has part: feature:3356906-3357045:-1:exon
so has part: feature:3356562-3356743:-1:exon
so has part: feature:3355930-3356186:-1:exon
so has part: feature:3353887-3354013:-1:exon
so has part: feature:3353453-3353569:-1:exon
so has part: feature:3347555-3348732:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3361316-3362026:-1:exon

position:3361316:-1
position: 3361316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3360283-3360339:-1:exon

position:3360283:-1
position: 3360283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3360339:-1
position: 3360339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3357322-3357480:-1:exon

position:3357322:-1
position: 3357322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3357480:-1
position: 3357480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3356906-3357045:-1:exon

position:3356906:-1
position: 3356906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3357045:-1
position: 3357045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3356562-3356743:-1:exon

position:3356562:-1
position: 3356562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3356743:-1
position: 3356743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3355930-3356186:-1:exon

position:3355930:-1
position: 3355930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3356186:-1
position: 3356186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3353887-3354013:-1:exon

position:3353887:-1
position: 3353887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3354013:-1
position: 3354013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3353453-3353569:-1:exon

position:3353453:-1
position: 3353453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3353569:-1
position: 3353569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3347555-3348732:-1:exon

position:3348732:-1
position: 3348732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tbcelb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: tbcelb
product: tubulin folding cofactor E-like b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041235051.1
SIO_010081: tbcelb
subclass of: SO_0000673
so part of: tbcelb
location: complement(join(3347555..3348732,3353453..3353569,3353887..3354013,3355930..3356186,3356562..3356743,3356906..3357045,3357322..3357480,3360283..3360374,3361316..3362026))
location: region:3347555-3362026:-1
so has part: feature:3361316-3362026:-1:exon
so has part: feature:3360283-3360374:-1:exon
so has part: feature:3357322-3357480:-1:exon
so has part: feature:3356906-3357045:-1:exon
so has part: feature:3356562-3356743:-1:exon
so has part: feature:3355930-3356186:-1:exon
so has part: feature:3353887-3354013:-1:exon
so has part: feature:3353453-3353569:-1:exon
so has part: feature:3347555-3348732:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3361316-3362026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3360283-3360374:-1:exon

position:3360374:-1
position: 3360374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3357322-3357480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3356906-3357045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3356562-3356743:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3355930-3356186:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3353887-3354013:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3353453-3353569:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3347555-3348732:-1:exon

tbcelb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: tbcelb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone cofactor E-like protein
translation: MEQAGGRSFMEVISEKYSPENFPYRRGPGMGIVVPAGPQGSPMKDRLNLPSILVLNSCCITSAGDEGEIAAFCAHVCELDLSDNKLEDWHEISKIVSSIPHLYFLNLTTNPLSRAVLDPGCCKALVRVRRLVLNNTKVSWETLHTLLSEMPQLEQLFLCLNGYDTVSHSSLRCSSLRLLHITDNNLQDWSEVCKVGAMFPCLDTLVMANNRLTSITGSRESLGRTFPCLRHINLHNSGLNSWGDIEKLNFFPKLDEVRLKGIPLLQNYTNTERRSLIIAQLPSVTMLNGSNVTDGEREDAERFFIRHYLDFPEEELPCRYHELVTKYGKLAPLAEVDLRPCCHAKVEVRCEGKVEIVSIRLDQTVSGLKKQLRSVVQLSPSSMRLYYIDKDVSCPFGPEEIKYSKRALHSYSIKDGDEILVVPKSRPQSTPAASSSTSCSSSTPLSPSL
SIO_010081: tbcelb
subclass of: SO_0000673
so part of: tbcelb
location: complement(join(3348339..3348732,3353453..3353569,3353887..3354013,3355930..3356186,3356562..3356743,3356906..3357045,3357322..3357454))
location: region:3348339-3357454:-1
so has part: feature:3357322-3357454:-1:exon
so has part: feature:3356906-3357045:-1:exon
so has part: feature:3356562-3356743:-1:exon
so has part: feature:3355930-3356186:-1:exon
so has part: feature:3353887-3354013:-1:exon
so has part: feature:3353453-3353569:-1:exon
so has part: feature:3348339-3348732:-1:exon

XP_041090985.1
type: Protein
SIO_000068: ncbiprotein

position:3348339:-1
position: 3348339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3357454:-1
position: 3357454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3357322-3357454:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3356906-3357045:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3356562-3356743:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3355930-3356186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3353887-3354013:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3353453-3353569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3348339-3348732:-1:exon

tbcelb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: tbcelb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin-specific chaperone cofactor E-like protein
translation: MEQAGGRSFMEVISEKYSPENFPYRRGPGMGIVVPAGPQGSPMKDRLNLPSILVLNSCCITSAGDEGEIAAFCAHVCELDLSDNKLEDWHEISKIVSSIPHLYFLNLTTNPLSRAVLDPGCCKALVRVRRLVLNNTKVSWETLHTLLSEMPQLEQLFLCLNGYDTVSHSSLRCSSLRLLHITDNNLQDWSEVCKVGAMFPCLDTLVMANNRLTSITGSRESLGRTFPCLRHINLHNSGLNSWGDIEKLNFFPKLDEVRLKGIPLLQNYTNTERRSLIIAQLPSVTMLNGSNVTDGEREDAERFFIRHYLDFPEEELPCRYHELVTKYGKLAPLAEVDLRPCCHAKVEVRCEGKVEIVSIRLDQTVSGLKKQLRSVVQLSPSSMRLYYIDKDVSCPFGPEEIKYSKRALHSYSIKDGDEILVVPKSRPQSTPAASSSTSCSSSTPLSPSL
SIO_010081: tbcelb
subclass of: SO_0000673
so part of: tbcelb
location: complement(join(3348339..3348732,3353453..3353569,3353887..3354013,3355930..3356186,3356562..3356743,3356906..3357045,3357322..3357454))
location: region:3348339-3357454:-1
so has part: feature:3357322-3357454:-1:exon
so has part: feature:3356906-3357045:-1:exon
so has part: feature:3356562-3356743:-1:exon
so has part: feature:3355930-3356186:-1:exon
so has part: feature:3353887-3354013:-1:exon
so has part: feature:3353453-3353569:-1:exon
so has part: feature:3348339-3348732:-1:exon

XP_041090986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3357322-3357454:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3356906-3357045:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3356562-3356743:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3355930-3356186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3353887-3354013:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3353453-3353569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3348339-3348732:-1:exon

ccdc153
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: ccdc153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3373334..3377976
location: region:3373334-3377976:1
so has part: feature:3373334-3377976:1:exon
subclass of: SO_0000010

121303927
type: Gene
SIO_000068: ncbigene