Polyodon spathula isolate WHYD16114869_AA chromosome 30, ASM1765450v1, whole genome shotgun sequence.
type: Entry
definition: Polyodon spathula isolate WHYD16114869_AA chromosome 30, ASM1765450v1, whole genome shotgun sequence.
sequence version: NC_054563.1
sequence date: 2021-05-03
sequence: sequence
division: CON
label: NC_054563.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA726223
dblink: SAMN09842169
keyword: WGS
keyword: RefSeq
source: Polyodon spathula (Mississippi paddlefish)
organism: Polyodon spathula
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Polyodontidae; Polyodon.
reference: 1
references: 33331879
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM030279.1.\nAssembly name: ASM1765450v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Yangtze River Fisheries\nResearch Institute, Chinese Academy of Fishery Sciences on\n2021/03/31. The original whole-genome shotgun project has the\naccession JADDYA000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Yangtze River Fisheries Research\n Institute, Chinese Academy of Fishery\n Sciences\nAssembly Date :: AUG-2019\nAssembly Method :: SSPACE v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 300.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Polyodon spathula Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 8649850
topology: linear
so has quality: SO_0000987
location: 1..8649850
location: region:1-8649850:1
RO_0002162: 7913

NC_054563
type: RefSeq
SIO_000068: refseq

PRJNA726223
type: BioProject
SIO_000068: bioproject

SAMN09842169
type: BioSample
SIO_000068: biosample

1
title: The American paddlefish genome provides novel insights into chromosomal evolution and bone mineralization in early vertebrates
author: Cheng, P.
author: Huang, Y.
author: Lv, Y.
author: Du, H.
author: Ruan, Z.
author: Li, C.
author: Ye, H.
author: Zhang, H.
author: Wu, J.
author: Wang, C.
author: Ruan, R.
author: Li, Y.
author: Bian, C.
author: You, X.
author: Shi, C.
author: Han, K.
author: Xu, J.
author: Shi, Q.
author: Wei, Q.
journal: Mol Biol Evol (2020) In press
pubmed: 33331879
comments: Publication Status: Available-Online prior to print

33331879
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8649850:1
position: 8649850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-8649850:1:source
so part of: sequence
organism: Polyodon spathula
mol type: genomic DNA
isolate: WHYD16114869_AA
chromosome: 30
tissue type: blood

7913
type: Taxonomy
SIO_000068: taxonomy

usp25
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: usp25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(28187..49546)
location: region:28187-49546:-1
so has part: feature:28187-49546:-1:exon
subclass of: SO_0000010

121302626
type: Gene
SIO_000068: ncbigene

position:28187:-1
position: 28187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49546:-1
position: 49546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28187-49546:-1:exon

usp25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: usp25
product: ubiquitin specific peptidase 25, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041232636.1
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: complement(join(28187..29030,29387..29582,30124..30247,32009..32088,32168..32246,33229..33407,36974..37113,39209..39433,39679..39907,40331..40401,40508..40725,41163..41318,43035..43130,43472..43599,43699..43847,45320..45393,46639..46715,49089..49226,49438..49546))
location: region:28187-49546:-1
so has part: feature:49438-49546:-1:exon
so has part: feature:49089-49226:-1:exon
so has part: feature:46639-46715:-1:exon
so has part: feature:45320-45393:-1:exon
so has part: feature:43699-43847:-1:exon
so has part: feature:43472-43599:-1:exon
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so has part: feature:41163-41318:-1:exon
so has part: feature:40508-40725:-1:exon
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so has part: feature:32009-32088:-1:exon
so has part: feature:30124-30247:-1:exon
so has part: feature:29387-29582:-1:exon
so has part: feature:28187-29030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49438-49546:-1:exon

position:49438:-1
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urn:…
SIO_000300: 2
SIO_000628: feature:49089-49226:-1:exon

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urn:…
SIO_000300: 3
SIO_000628: feature:46639-46715:-1:exon

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position: 46639
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urn:…
SIO_000300: 4
SIO_000628: feature:45320-45393:-1:exon

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reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:43699-43847:-1:exon

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reference: sequence
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position:43847:-1
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:43472-43599:-1:exon

position:43472:-1
position: 43472
reference: sequence
type: ReverseStrandPosition
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position:43599:-1
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:43035-43130:-1:exon

position:43035:-1
position: 43035
reference: sequence
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position:43130:-1
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:41163-41318:-1:exon

position:41163:-1
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reference: sequence
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position:41318:-1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:40508-40725:-1:exon

position:40508:-1
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reference: sequence
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:40331-40401:-1:exon

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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:39679-39907:-1:exon

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urn:…
SIO_000300: 12
SIO_000628: feature:39209-39433:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:36974-37113:-1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:33229-33407:-1:exon

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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 17
SIO_000628: feature:30124-30247:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:29387-29582:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:28187-29030:-1:exon

position:29030:-1
position: 29030
reference: sequence
type: ReverseStrandPosition
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usp25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: usp25
product: ubiquitin specific peptidase 25, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_041232635.1
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: complement(join(28187..29030,29387..29582,30124..30247,32009..32088,32168..32246,33229..33407,34985..35080,35882..35989,36974..37113,39209..39433,39679..39907,40331..40401,40508..40725,41163..41318,43035..43130,43472..43599,43699..43847,45320..45393,46639..46715,49089..49226,49438..49546))
location: region:28187-49546:-1
so has part: feature:49438-49546:-1:exon
so has part: feature:49089-49226:-1:exon
so has part: feature:46639-46715:-1:exon
so has part: feature:45320-45393:-1:exon
so has part: feature:43699-43847:-1:exon
so has part: feature:43472-43599:-1:exon
so has part: feature:43035-43130:-1:exon
so has part: feature:41163-41318:-1:exon
so has part: feature:40508-40725:-1:exon
so has part: feature:40331-40401:-1:exon
so has part: feature:39679-39907:-1:exon
so has part: feature:39209-39433:-1:exon
so has part: feature:36974-37113:-1:exon
so has part: feature:35882-35989:-1:exon
so has part: feature:34985-35080:-1:exon
so has part: feature:33229-33407:-1:exon
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so has part: feature:32009-32088:-1:exon
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urn:…
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SIO_000628: feature:43699-43847:-1:exon

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SIO_000628: feature:43472-43599:-1:exon

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SIO_000300: 7
SIO_000628: feature:43035-43130:-1:exon

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SIO_000300: 8
SIO_000628: feature:41163-41318:-1:exon

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SIO_000300: 9
SIO_000628: feature:40508-40725:-1:exon

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SIO_000628: feature:40331-40401:-1:exon

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SIO_000300: 11
SIO_000628: feature:39679-39907:-1:exon

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SIO_000628: feature:39209-39433:-1:exon

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SIO_000300: 13
SIO_000628: feature:36974-37113:-1:exon

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SIO_000300: 14
SIO_000628: feature:35882-35989:-1:exon

position:35882:-1
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reference: sequence
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position:35989:-1
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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:34985-35080:-1:exon

position:34985:-1
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:33229-33407:-1:exon

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SIO_000300: 17
SIO_000628: feature:32168-32246:-1:exon

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SIO_000300: 18
SIO_000628: feature:32009-32088:-1:exon

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SIO_000300: 19
SIO_000628: feature:30124-30247:-1:exon

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SIO_000300: 20
SIO_000628: feature:29387-29582:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:28187-29030:-1:exon

usp25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: usp25
product: ubiquitin specific peptidase 25, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041232634.1
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: complement(join(28187..29030,29387..29582,30124..30247,32009..32088,32168..32246,33229..33407,34985..35080,35882..35989,36974..37113,39209..39433,39679..39907,40331..40401,40508..40725,41163..41318,43035..43130,43472..43599,43699..43847,45320..45393,45711..45716,46639..46715,49089..49226,49438..49546))
location: region:28187-49546:-1
so has part: feature:49438-49546:-1:exon
so has part: feature:49089-49226:-1:exon
so has part: feature:46639-46715:-1:exon
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urn:…
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SIO_000628: feature:28187-29030:-1:exon

usp25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: usp25
product: ubiquitin specific peptidase 25, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041232633.1
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: complement(join(28187..29030,29387..29582,30124..30247,32009..32088,32168..32246,33229..33407,36974..37113,39209..39433,39679..39907,40331..40401,40508..40725,41163..41318,43035..43130,43472..43599,43699..43847,45320..45393,45711..45716,46639..46715,49089..49226,49438..49545))
location: region:28187-49545:-1
so has part: feature:49438-49545:-1:exon
so has part: feature:49089-49226:-1:exon
so has part: feature:46639-46715:-1:exon
so has part: feature:45711-45716:-1:exon
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so has part: feature:33229-33407:-1:exon
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so has part: feature:30124-30247:-1:exon
so has part: feature:29387-29582:-1:exon
so has part: feature:28187-29030:-1:exon

position:49545:-1
position: 49545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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SIO_000628: feature:49438-49545:-1:exon

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SIO_000628: feature:49089-49226:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:29387-29582:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:28187-29030:-1:exon

usp25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: usp25
product: ubiquitin specific peptidase 25, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041232632.1
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: complement(join(28187..29030,29387..29582,30124..30247,32009..32088,32168..32246,33229..33407,34985..35080,35930..35989,36974..37113,39209..39433,39679..39907,40331..40401,40508..40725,41163..41318,43035..43130,43472..43599,43699..43847,45320..45393,45711..45716,46639..46715,49089..49226,49438..49545))
location: region:28187-49545:-1
so has part: feature:49438-49545:-1:exon
so has part: feature:49089-49226:-1:exon
so has part: feature:46639-46715:-1:exon
so has part: feature:45711-45716:-1:exon
so has part: feature:45320-45393:-1:exon
so has part: feature:43699-43847:-1:exon
so has part: feature:43472-43599:-1:exon
so has part: feature:43035-43130:-1:exon
so has part: feature:41163-41318:-1:exon
so has part: feature:40508-40725:-1:exon
so has part: feature:40331-40401:-1:exon
so has part: feature:39679-39907:-1:exon
so has part: feature:39209-39433:-1:exon
so has part: feature:36974-37113:-1:exon
so has part: feature:35930-35989:-1:exon
so has part: feature:34985-35080:-1:exon
so has part: feature:33229-33407:-1:exon
so has part: feature:32168-32246:-1:exon
so has part: feature:32009-32088:-1:exon
so has part: feature:30124-30247:-1:exon
so has part: feature:29387-29582:-1:exon
so has part: feature:28187-29030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49438-49545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49089-49226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:46639-46715:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45711-45716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45320-45393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43699-43847:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43472-43599:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43035-43130:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:41163-41318:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:40508-40725:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:40331-40401:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:39679-39907:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:39209-39433:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:36974-37113:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:35930-35989:-1:exon

position:35930:-1
position: 35930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:34985-35080:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:33229-33407:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:32168-32246:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:32009-32088:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:30124-30247:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:29387-29582:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:28187-29030:-1:exon

usp25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: usp25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X5
translation: MQELRHVFSLLVGSKRKYVDPSRAVEILKDAFKATDSQQQDVSEFTHKLLDWLEDAFQMKAEEEREGEKPKNPMLELFYGRFLAVGVHEGKRFENTELFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSAKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHHKLEFPSVLYMDRYMDKNREITRLKREEIRRLKEHLTILQQRLERYLSYGSGPKRFPLADVLQYALEFASSKPVCTSPLEDIEAPPGGTTASQAAPSTAEHAPCSSPEAPPPPPPPSQQRSVIYKPFTQSRIPLDLPMHPAPRHVTDEELGVLEGCLQRWRSEVEQDTRDLQGSISRIHRTIELMYSDKSMMQVPYRLHAVLVHEGQASAGHYWAYIHSQPQGRWMKYNDISVTKSSWEELVRDSFGGYRNASAYCLMYIDEKKPFLIREEFDKETGQMLTGFDKLPPDLKEYVKEDNQRFVKEIEEWDALQVKKAQQERLAAEATEATASQAAAKEPAPTVTAAPPQDPEYMEQPSPADESKQLKEDTERAIAKAAAEHEDGGPEALLQAAFTMEYARLLRFAQEDTPPETDHRLQHVLVYLIQNHAPKSILERTLLEQFAHHSLGFDQRCKSIMEVARAKLELIKPEEVNMEEYEIWHQDYRNFRETTFYLLTGLELFQKRSYAETLMYLIYAHQYNKELLLKGSYRGHSEELIAHYRRQCLLKLNEHAARLFESGEDQEVANGLNIMNELVVPCLPLLLVDEMEEKDIIAVEDMRNRWCSYLGQEMEARLQEKLTDFLPKLLDCSTEIKSFRDPPKLPSYCTLELCERFSRVVCSLSRSPADGK
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: complement(join(28858..29030,29387..29582,30124..30247,32009..32088,32168..32246,33229..33407,36974..37113,39209..39433,39679..39907,40331..40401,40508..40725,41163..41318,43035..43130,43472..43599,43699..43847,45320..45393,46639..46715,49089..49205))
location: region:28858-49205:-1
so has part: feature:49089-49205:-1:exon
so has part: feature:46639-46715:-1:exon
so has part: feature:45320-45393:-1:exon
so has part: feature:43699-43847:-1:exon
so has part: feature:43472-43599:-1:exon
so has part: feature:43035-43130:-1:exon
so has part: feature:41163-41318:-1:exon
so has part: feature:40508-40725:-1:exon
so has part: feature:40331-40401:-1:exon
so has part: feature:39679-39907:-1:exon
so has part: feature:39209-39433:-1:exon
so has part: feature:36974-37113:-1:exon
so has part: feature:33229-33407:-1:exon
so has part: feature:32168-32246:-1:exon
so has part: feature:32009-32088:-1:exon
so has part: feature:30124-30247:-1:exon
so has part: feature:29387-29582:-1:exon
so has part: feature:28858-29030:-1:exon

XP_041088570.1
type: Protein
SIO_000068: ncbiprotein

position:28858:-1
position: 28858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49205:-1
position: 49205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49089-49205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46639-46715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45320-45393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43699-43847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43472-43599:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43035-43130:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:41163-41318:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:40508-40725:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:40331-40401:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:39679-39907:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39209-39433:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:36974-37113:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:33229-33407:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:32168-32246:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:32009-32088:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:30124-30247:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:29387-29582:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:28858-29030:-1:exon

usp25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: usp25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X4
translation: MQELRHVFSLLVGSKRKYVDPSRAVEILKDAFKATDSQQQDVSEFTHKLLDWLEDAFQMKAEEEREGEKPKNPMLELFYGRFLAVGVHEGKRFENTELFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSAKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHHKLEFPSVLYMDRYMDKNREITRLKREEIRRLKEHLTILQQRLERYLSYGSGPKRFPLADVLQYALEFASSKPVCTSPLEDIEAPPGGTTASQAAPSTAEHAPCSSPEAPPPPPPPSQQRSVIYKPFTQSRIPLDLPMHPAPRHVTDEELGVLEGCLQRWRSEVEQDTRDLQGSISRIHRTIELMYSDKSMMQVPYRLHAVLVHEGQASAGHYWAYIHSQPQGRWMKYNDISVTKSSWEELVRDSFGGYRNASAYCLMYIDEKKPFLIREEFDKETGQMLTGFDKLPPDLKEYVKEDNQRFVKEIEEWDALQVKKAQQERLAAEATEATASQAAAKEPAPTVTAAPPQDPEYMEQPSPADESKQLKEDTERAIAKAAAEHEDGGPEALLQASEAPAKPPASQRVVEVAIPHVGTFVIESEEGGYDDEVMLTPAMQGILMAIDRTRSVSDRCGPEAAFFKAFTMEYARLLRFAQEDTPPETDHRLQHVLVYLIQNHAPKSILERTLLEQFAHHSLGFDQRCKSIMEVARAKLELIKPEEVNMEEYEIWHQDYRNFRETTFYLLTGLELFQKRSYAETLMYLIYAHQYNKELLLKGSYRGHSEELIAHYRRQCLLKLNEHAARLFESGEDQEVANGLNIMNELVVPCLPLLLVDEMEEKDIIAVEDMRNRWCSYLGQEMEARLQEKLTDFLPKLLDCSTEIKSFRDPPKLPSYCTLELCERFSRVVCSLSRSPADGK
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: complement(join(28858..29030,29387..29582,30124..30247,32009..32088,32168..32246,33229..33407,34985..35080,35882..35989,36974..37113,39209..39433,39679..39907,40331..40401,40508..40725,41163..41318,43035..43130,43472..43599,43699..43847,45320..45393,46639..46715,49089..49205))
location: region:28858-49205:-1
so has part: feature:49089-49205:-1:exon
so has part: feature:46639-46715:-1:exon
so has part: feature:45320-45393:-1:exon
so has part: feature:43699-43847:-1:exon
so has part: feature:43472-43599:-1:exon
so has part: feature:43035-43130:-1:exon
so has part: feature:41163-41318:-1:exon
so has part: feature:40508-40725:-1:exon
so has part: feature:40331-40401:-1:exon
so has part: feature:39679-39907:-1:exon
so has part: feature:39209-39433:-1:exon
so has part: feature:36974-37113:-1:exon
so has part: feature:35882-35989:-1:exon
so has part: feature:34985-35080:-1:exon
so has part: feature:33229-33407:-1:exon
so has part: feature:32168-32246:-1:exon
so has part: feature:32009-32088:-1:exon
so has part: feature:30124-30247:-1:exon
so has part: feature:29387-29582:-1:exon
so has part: feature:28858-29030:-1:exon

XP_041088569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49089-49205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46639-46715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45320-45393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43699-43847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43472-43599:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43035-43130:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:41163-41318:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:40508-40725:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:40331-40401:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:39679-39907:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39209-39433:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:36974-37113:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:35882-35989:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:34985-35080:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:33229-33407:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:32168-32246:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:32009-32088:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:30124-30247:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:29387-29582:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:28858-29030:-1:exon

usp25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: usp25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X2
translation: MQELRHVFSLLVGSKRKYVDPSRAVEILKDAFKATDSQQQDVSEFTHKLLDWLEDAFQMKAEEERVREGEKPKNPMLELFYGRFLAVGVHEGKRFENTELFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSAKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHHKLEFPSVLYMDRYMDKNREITRLKREEIRRLKEHLTILQQRLERYLSYGSGPKRFPLADVLQYALEFASSKPVCTSPLEDIEAPPGGTTASQAAPSTAEHAPCSSPEAPPPPPPPSQQRSVIYKPFTQSRIPLDLPMHPAPRHVTDEELGVLEGCLQRWRSEVEQDTRDLQGSISRIHRTIELMYSDKSMMQVPYRLHAVLVHEGQASAGHYWAYIHSQPQGRWMKYNDISVTKSSWEELVRDSFGGYRNASAYCLMYIDEKKPFLIREEFDKETGQMLTGFDKLPPDLKEYVKEDNQRFVKEIEEWDALQVKKAQQERLAAEATEATASQAAAKEPAPTVTAAPPQDPEYMEQPSPADESKQLKEDTERAIAKAAAEHEDGGPEALLQAAFTMEYARLLRFAQEDTPPETDHRLQHVLVYLIQNHAPKSILERTLLEQFAHHSLGFDQRCKSIMEVARAKLELIKPEEVNMEEYEIWHQDYRNFRETTFYLLTGLELFQKRSYAETLMYLIYAHQYNKELLLKGSYRGHSEELIAHYRRQCLLKLNEHAARLFESGEDQEVANGLNIMNELVVPCLPLLLVDEMEEKDIIAVEDMRNRWCSYLGQEMEARLQEKLTDFLPKLLDCSTEIKSFRDPPKLPSYCTLELCERFSRVVCSLSRSPADGK
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: complement(join(28858..29030,29387..29582,30124..30247,32009..32088,32168..32246,33229..33407,36974..37113,39209..39433,39679..39907,40331..40401,40508..40725,41163..41318,43035..43130,43472..43599,43699..43847,45320..45393,45711..45716,46639..46715,49089..49205))
location: region:28858-49205:-1
so has part: feature:49089-49205:-1:exon
so has part: feature:46639-46715:-1:exon
so has part: feature:45711-45716:-1:exon
so has part: feature:45320-45393:-1:exon
so has part: feature:43699-43847:-1:exon
so has part: feature:43472-43599:-1:exon
so has part: feature:43035-43130:-1:exon
so has part: feature:41163-41318:-1:exon
so has part: feature:40508-40725:-1:exon
so has part: feature:40331-40401:-1:exon
so has part: feature:39679-39907:-1:exon
so has part: feature:39209-39433:-1:exon
so has part: feature:36974-37113:-1:exon
so has part: feature:33229-33407:-1:exon
so has part: feature:32168-32246:-1:exon
so has part: feature:32009-32088:-1:exon
so has part: feature:30124-30247:-1:exon
so has part: feature:29387-29582:-1:exon
so has part: feature:28858-29030:-1:exon

XP_041088567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49089-49205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46639-46715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45711-45716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45320-45393:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43699-43847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43472-43599:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43035-43130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:41163-41318:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:40508-40725:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:40331-40401:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39679-39907:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:39209-39433:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:36974-37113:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:33229-33407:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:32168-32246:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:32009-32088:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:30124-30247:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:29387-29582:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:28858-29030:-1:exon

usp25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: usp25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X1
translation: MQELRHVFSLLVGSKRKYVDPSRAVEILKDAFKATDSQQQDVSEFTHKLLDWLEDAFQMKAEEERVREGEKPKNPMLELFYGRFLAVGVHEGKRFENTELFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSAKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHHKLEFPSVLYMDRYMDKNREITRLKREEIRRLKEHLTILQQRLERYLSYGSGPKRFPLADVLQYALEFASSKPVCTSPLEDIEAPPGGTTASQAAPSTAEHAPCSSPEAPPPPPPPSQQRSVIYKPFTQSRIPLDLPMHPAPRHVTDEELGVLEGCLQRWRSEVEQDTRDLQGSISRIHRTIELMYSDKSMMQVPYRLHAVLVHEGQASAGHYWAYIHSQPQGRWMKYNDISVTKSSWEELVRDSFGGYRNASAYCLMYIDEKKPFLIREEFDKETGQMLTGFDKLPPDLKEYVKEDNQRFVKEIEEWDALQVKKAQQERLAAEATEATASQAAAKEPAPTVTAAPPQDPEYMEQPSPADESKQLKEDTERAIAKAAAEHEDGGPEALLQASEAPAKPPASQRVVEVAIPHVMLTPAMQGILMAIDRTRSVSDRCGPEAAFFKAFTMEYARLLRFAQEDTPPETDHRLQHVLVYLIQNHAPKSILERTLLEQFAHHSLGFDQRCKSIMEVARAKLELIKPEEVNMEEYEIWHQDYRNFRETTFYLLTGLELFQKRSYAETLMYLIYAHQYNKELLLKGSYRGHSEELIAHYRRQCLLKLNEHAARLFESGEDQEVANGLNIMNELVVPCLPLLLVDEMEEKDIIAVEDMRNRWCSYLGQEMEARLQEKLTDFLPKLLDCSTEIKSFRDPPKLPSYCTLELCERFSRVVCSLSRSPADGK
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: complement(join(28858..29030,29387..29582,30124..30247,32009..32088,32168..32246,33229..33407,34985..35080,35930..35989,36974..37113,39209..39433,39679..39907,40331..40401,40508..40725,41163..41318,43035..43130,43472..43599,43699..43847,45320..45393,45711..45716,46639..46715,49089..49205))
location: region:28858-49205:-1
so has part: feature:49089-49205:-1:exon
so has part: feature:46639-46715:-1:exon
so has part: feature:45711-45716:-1:exon
so has part: feature:45320-45393:-1:exon
so has part: feature:43699-43847:-1:exon
so has part: feature:43472-43599:-1:exon
so has part: feature:43035-43130:-1:exon
so has part: feature:41163-41318:-1:exon
so has part: feature:40508-40725:-1:exon
so has part: feature:40331-40401:-1:exon
so has part: feature:39679-39907:-1:exon
so has part: feature:39209-39433:-1:exon
so has part: feature:36974-37113:-1:exon
so has part: feature:35930-35989:-1:exon
so has part: feature:34985-35080:-1:exon
so has part: feature:33229-33407:-1:exon
so has part: feature:32168-32246:-1:exon
so has part: feature:32009-32088:-1:exon
so has part: feature:30124-30247:-1:exon
so has part: feature:29387-29582:-1:exon
so has part: feature:28858-29030:-1:exon

XP_041088566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49089-49205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46639-46715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45711-45716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45320-45393:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43699-43847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43472-43599:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43035-43130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:41163-41318:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:40508-40725:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:40331-40401:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39679-39907:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:39209-39433:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:36974-37113:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:35930-35989:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:34985-35080:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:33229-33407:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:32168-32246:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:32009-32088:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:30124-30247:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:29387-29582:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:28858-29030:-1:exon

usp25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: usp25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 25 isoform X3
translation: MQELRHVFSLLVGSKRKYVDPSRAVEILKDAFKATDSQQQDVSEFTHKLLDWLEDAFQMKAEEERVREGEKPKNPMLELFYGRFLAVGVHEGKRFENTELFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSAKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHHKLEFPSVLYMDRYMDKNREITRLKREEIRRLKEHLTILQQRLERYLSYGSGPKRFPLADVLQYALEFASSKPVCTSPLEDIEAPPGGTTASQAAPSTAEHAPCSSPEAPPPPPPPSQQRSVIYKPFTQSRIPLDLPMHPAPRHVTDEELGVLEGCLQRWRSEVEQDTRDLQGSISRIHRTIELMYSDKSMMQVPYRLHAVLVHEGQASAGHYWAYIHSQPQGRWMKYNDISVTKSSWEELVRDSFGGYRNASAYCLMYIDEKKPFLIREEFDKETGQMLTGFDKLPPDLKEYVKEDNQRFVKEIEEWDALQVKKAQQERLAAEATEATASQAAAKEPAPTVTAAPPQDPEYMEQPSPADESKQLKEDTERAIAKAAAEHEDGGPEALLQASEAPAKPPASQRVVEVAIPHVGTFVIESEEGGYDDEVMLTPAMQGILMAIDRTRSVSDRCGPEAAFFKAFTMEYARLLRFAQEDTPPETDHRLQHVLVYLIQNHAPKSILERTLLEQFAHHSLGFDQRCKSIMEVARAKLELIKPEEVNMEEYEIWHQDYRNFRETTFYLLTGLELFQKRSYAETLMYLIYAHQYNKELLLKGSYRGHSEELIAHYRRQCLLKLNEHAARLFESGEDQEVANGLNIMNELVVPCLPLLLVDEMEEKDIIAVEDMRNRWCSYLGQEMEARLQEKLTDFLPKLLDCSTEIKSFRDPPKLPSYCTLELCERFSRVVCSLSRSPADGK
SIO_010081: usp25
subclass of: SO_0000673
so part of: usp25
location: complement(join(28858..29030,29387..29582,30124..30247,32009..32088,32168..32246,33229..33407,34985..35080,35882..35989,36974..37113,39209..39433,39679..39907,40331..40401,40508..40725,41163..41318,43035..43130,43472..43599,43699..43847,45320..45393,45711..45716,46639..46715,49089..49205))
location: region:28858-49205:-1
so has part: feature:49089-49205:-1:exon
so has part: feature:46639-46715:-1:exon
so has part: feature:45711-45716:-1:exon
so has part: feature:45320-45393:-1:exon
so has part: feature:43699-43847:-1:exon
so has part: feature:43472-43599:-1:exon
so has part: feature:43035-43130:-1:exon
so has part: feature:41163-41318:-1:exon
so has part: feature:40508-40725:-1:exon
so has part: feature:40331-40401:-1:exon
so has part: feature:39679-39907:-1:exon
so has part: feature:39209-39433:-1:exon
so has part: feature:36974-37113:-1:exon
so has part: feature:35882-35989:-1:exon
so has part: feature:34985-35080:-1:exon
so has part: feature:33229-33407:-1:exon
so has part: feature:32168-32246:-1:exon
so has part: feature:32009-32088:-1:exon
so has part: feature:30124-30247:-1:exon
so has part: feature:29387-29582:-1:exon
so has part: feature:28858-29030:-1:exon

XP_041088568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49089-49205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46639-46715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45711-45716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45320-45393:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43699-43847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43472-43599:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43035-43130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:41163-41318:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:40508-40725:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:40331-40401:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39679-39907:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:39209-39433:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:36974-37113:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:35882-35989:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:34985-35080:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:33229-33407:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:32168-32246:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:32009-32088:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:30124-30247:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:29387-29582:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:28858-29030:-1:exon

LOC121302627
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302627
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 45726..46239
location: region:45726-46239:1
so has part: feature:45726-46239:1:exon
subclass of: SO_0000011

121302627
type: Gene
SIO_000068: ncbigene

position:45726:1
position: 45726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46239:1
position: 46239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45726-46239:1:exon

LOC121302627
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: lncRNA
gene: LOC121302627
product: uncharacterized LOC121302627
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_005947717.1
SIO_010081: LOC121302627
subclass of: SO_0000673
so part of: LOC121302627
location: join(45726..45992,46045..46239)
location: region:45726-46239:1
so has part: feature:45726-45992:1:exon
so has part: feature:46045-46239:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45726-45992:1:exon

position:45992:1
position: 45992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:46045-46239:1:exon

position:46045:1
position: 46045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121302672
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302672
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 79988..111553
location: region:79988-111553:1
so has part: feature:79988-111553:1:exon
subclass of: SO_0000010

121302672
type: Gene
SIO_000068: ncbigene

position:79988:1
position: 79988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111553:1
position: 111553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79988-111553:1:exon

LOC121302672
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302672
product: nuclear receptor-interacting protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041232720.1
SIO_010081: LOC121302672
subclass of: SO_0000673
so part of: LOC121302672
location: join(79988..80289,92087..92247,104925..111553)
location: region:79988-111553:1
so has part: feature:79988-80289:1:exon
so has part: feature:92087-92247:1:exon
so has part: feature:104925-111553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79988-80289:1:exon

position:80289:1
position: 80289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92087-92247:1:exon

position:92087:1
position: 92087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92247:1
position: 92247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:104925-111553:1:exon

position:104925:1
position: 104925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121302672
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302672
product: nuclear receptor-interacting protein 1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041232722.1
SIO_010081: LOC121302672
subclass of: SO_0000673
so part of: LOC121302672
location: join(79988..80289,92087..92146,95019..95280,104925..111553)
location: region:79988-111553:1
so has part: feature:79988-80289:1:exon
so has part: feature:92087-92146:1:exon
so has part: feature:95019-95280:1:exon
so has part: feature:104925-111553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79988-80289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92087-92146:1:exon

position:92146:1
position: 92146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:95019-95280:1:exon

position:95019:1
position: 95019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95280:1
position: 95280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:104925-111553:1:exon

LOC121302672
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302672
product: nuclear receptor-interacting protein 1-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_041232725.1
SIO_010081: LOC121302672
subclass of: SO_0000673
so part of: LOC121302672
location: join(79988..80289,92087..92146,104925..111553)
location: region:79988-111553:1
so has part: feature:79988-80289:1:exon
so has part: feature:92087-92146:1:exon
so has part: feature:104925-111553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79988-80289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92087-92146:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104925-111553:1:exon

LOC121302672
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302672
product: nuclear receptor-interacting protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_041232719.1
SIO_010081: LOC121302672
subclass of: SO_0000673
so part of: LOC121302672
location: join(79988..80289,95019..95280,104925..111553)
location: region:79988-111553:1
so has part: feature:79988-80289:1:exon
so has part: feature:95019-95280:1:exon
so has part: feature:104925-111553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79988-80289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95019-95280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104925-111553:1:exon

LOC121302672
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302672
product: nuclear receptor-interacting protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_041232718.1
SIO_010081: LOC121302672
subclass of: SO_0000673
so part of: LOC121302672
location: join(79988..80289,104925..111553)
location: region:79988-111553:1
so has part: feature:79988-80289:1:exon
so has part: feature:104925-111553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79988-80289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104925-111553:1:exon

LOC121302672
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302672
product: nuclear receptor-interacting protein 1-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041232724.1
SIO_010081: LOC121302672
subclass of: SO_0000673
so part of: LOC121302672
location: join(90030..91099,92087..92247,104925..111553)
location: region:90030-111553:1
so has part: feature:90030-91099:1:exon
so has part: feature:92087-92247:1:exon
so has part: feature:104925-111553:1:exon

position:90030:1
position: 90030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90030-91099:1:exon

position:91099:1
position: 91099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92087-92247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104925-111553:1:exon

LOC121302672
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302672
product: nuclear receptor-interacting protein 1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_041232721.1
SIO_010081: LOC121302672
subclass of: SO_0000673
so part of: LOC121302672
location: join(94037..95280,104925..111553)
location: region:94037-111553:1
so has part: feature:94037-95280:1:exon
so has part: feature:104925-111553:1:exon

position:94037:1
position: 94037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94037-95280:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104925-111553:1:exon

LOC121302672
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302672
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1-like
translation: MTHGEEPGSEMHQDSVVLTYLEGLLMHQVEGGLGAAATRRSDVGHSVQDQNNKPASSYLLPSHGSCPEERRTGPGSGTQHLKKARLLQSTEAWSAPERHRLPDPAVDLNGQSRELLTGALGDSPKCKQESTLLASLLQSFSSRLQSVALSQQIMQSLQHQGYPRSDESAPDEEEALGCYGIASSRLKGLMKRKNKVPSRSSVPYRRRNSQERASESPQAAPPASEPLSCAARLKAVASLVEHRSSPAASPKPSVACSQLALLLSSEAHLQQYSREQALKSKLAVRSASERLAAIASQKQQDNTQTQLPNSSPLNGQCGSLLKSADSSKHNPTPSPGHSSSSRNPSSLRDRGSFVKPSPRASPYCSSLLLQLLNNHNTQKQVNGHRVMEGSYHAFPNHSSPALRSAREYSNQDNSLTEDSSDAESFHSRCSPIDLSLRARASRPSFGSAGSLETLTESLISNWNPETPRLHTPETRPRENASVTKPYQKVTLLQLLLDHKNNEKTDMSSDKRELQKGFSPEHRSAPAESVIPVRKCEESMKRSSPDALNFGKVETLPKFHHSQEAAVVASSPSASLYSLRPPSRMQGIPAPTPLLDLRKSSNDNTSAGGAGASPHEAAQEASFSASKLLQNLAQCGLQNSAQSLFPSQPSVLANKRQTFEMKADKPVALLERLSAPVTRNTSPVLEEASMNMRKPASLAESCVASRSEIENLLERRSVLQLLMGTGDSKEKTLFKRKRSASKVGLPERQPSQSYSSGDLIEPVLQVKIKTEPKEETSTSEYECEADTSQSEERSEKQHSPVPLPVSAPPRDMKQEPGTIAQEPIPRDGLLSQLLKQPPSAYHANKHTGGNMNNLKETQTLNQGTVVPKKRKLCLSSEEHFLSPVRMEVSNEQHTSSMEPLCKPSEKRLSRDTGTQVEVEAVGHVGCSASESPGCAKDGKDFNVLKQLLLSDNCLKDLSQPRGTASSSVLQNDCKPNGRLKYSPETSSFQRNLSLPASGPLDLKISQSAPVGSSPRSGSPWGGHVARQESPQLNLVPVNSEAEGPIRWVIRGDDKCDVNKDYPRLTKSNPILYYMLQKGNSSLSKEGKQRRAQVVCPSEPVQYGLHVQIKQEPTSEEESYNHGLNLKRYAQSRLHKNHNGGLSDILEKVPAVKTESD
SIO_010081: LOC121302672
subclass of: SO_0000673
so part of: LOC121302672
location: 105327..108794
location: region:105327-108794:1
so has part: feature:105327-108794:1:exon

XP_041088652.1
type: Protein
SIO_000068: ncbiprotein

position:105327:1
position: 105327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108794:1
position: 108794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105327-108794:1:exon

LOC121302672
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302672
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1-like
translation: MTHGEEPGSEMHQDSVVLTYLEGLLMHQVEGGLGAAATRRSDVGHSVQDQNNKPASSYLLPSHGSCPEERRTGPGSGTQHLKKARLLQSTEAWSAPERHRLPDPAVDLNGQSRELLTGALGDSPKCKQESTLLASLLQSFSSRLQSVALSQQIMQSLQHQGYPRSDESAPDEEEALGCYGIASSRLKGLMKRKNKVPSRSSVPYRRRNSQERASESPQAAPPASEPLSCAARLKAVASLVEHRSSPAASPKPSVACSQLALLLSSEAHLQQYSREQALKSKLAVRSASERLAAIASQKQQDNTQTQLPNSSPLNGQCGSLLKSADSSKHNPTPSPGHSSSSRNPSSLRDRGSFVKPSPRASPYCSSLLLQLLNNHNTQKQVNGHRVMEGSYHAFPNHSSPALRSAREYSNQDNSLTEDSSDAESFHSRCSPIDLSLRARASRPSFGSAGSLETLTESLISNWNPETPRLHTPETRPRENASVTKPYQKVTLLQLLLDHKNNEKTDMSSDKRELQKGFSPEHRSAPAESVIPVRKCEESMKRSSPDALNFGKVETLPKFHHSQEAAVVASSPSASLYSLRPPSRMQGIPAPTPLLDLRKSSNDNTSAGGAGASPHEAAQEASFSASKLLQNLAQCGLQNSAQSLFPSQPSVLANKRQTFEMKADKPVALLERLSAPVTRNTSPVLEEASMNMRKPASLAESCVASRSEIENLLERRSVLQLLMGTGDSKEKTLFKRKRSASKVGLPERQPSQSYSSGDLIEPVLQVKIKTEPKEETSTSEYECEADTSQSEERSEKQHSPVPLPVSAPPRDMKQEPGTIAQEPIPRDGLLSQLLKQPPSAYHANKHTGGNMNNLKETQTLNQGTVVPKKRKLCLSSEEHFLSPVRMEVSNEQHTSSMEPLCKPSEKRLSRDTGTQVEVEAVGHVGCSASESPGCAKDGKDFNVLKQLLLSDNCLKDLSQPRGTASSSVLQNDCKPNGRLKYSPETSSFQRNLSLPASGPLDLKISQSAPVGSSPRSGSPWGGHVARQESPQLNLVPVNSEAEGPIRWVIRGDDKCDVNKDYPRLTKSNPILYYMLQKGNSSLSKEGKQRRAQVVCPSEPVQYGLHVQIKQEPTSEEESYNHGLNLKRYAQSRLHKNHNGGLSDILEKVPAVKTESD
SIO_010081: LOC121302672
subclass of: SO_0000673
so part of: LOC121302672
location: 105327..108794
location: region:105327-108794:1
so has part: feature:105327-108794:1:exon

XP_041088653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105327-108794:1:exon

LOC121302672
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302672
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1-like
translation: MTHGEEPGSEMHQDSVVLTYLEGLLMHQVEGGLGAAATRRSDVGHSVQDQNNKPASSYLLPSHGSCPEERRTGPGSGTQHLKKARLLQSTEAWSAPERHRLPDPAVDLNGQSRELLTGALGDSPKCKQESTLLASLLQSFSSRLQSVALSQQIMQSLQHQGYPRSDESAPDEEEALGCYGIASSRLKGLMKRKNKVPSRSSVPYRRRNSQERASESPQAAPPASEPLSCAARLKAVASLVEHRSSPAASPKPSVACSQLALLLSSEAHLQQYSREQALKSKLAVRSASERLAAIASQKQQDNTQTQLPNSSPLNGQCGSLLKSADSSKHNPTPSPGHSSSSRNPSSLRDRGSFVKPSPRASPYCSSLLLQLLNNHNTQKQVNGHRVMEGSYHAFPNHSSPALRSAREYSNQDNSLTEDSSDAESFHSRCSPIDLSLRARASRPSFGSAGSLETLTESLISNWNPETPRLHTPETRPRENASVTKPYQKVTLLQLLLDHKNNEKTDMSSDKRELQKGFSPEHRSAPAESVIPVRKCEESMKRSSPDALNFGKVETLPKFHHSQEAAVVASSPSASLYSLRPPSRMQGIPAPTPLLDLRKSSNDNTSAGGAGASPHEAAQEASFSASKLLQNLAQCGLQNSAQSLFPSQPSVLANKRQTFEMKADKPVALLERLSAPVTRNTSPVLEEASMNMRKPASLAESCVASRSEIENLLERRSVLQLLMGTGDSKEKTLFKRKRSASKVGLPERQPSQSYSSGDLIEPVLQVKIKTEPKEETSTSEYECEADTSQSEERSEKQHSPVPLPVSAPPRDMKQEPGTIAQEPIPRDGLLSQLLKQPPSAYHANKHTGGNMNNLKETQTLNQGTVVPKKRKLCLSSEEHFLSPVRMEVSNEQHTSSMEPLCKPSEKRLSRDTGTQVEVEAVGHVGCSASESPGCAKDGKDFNVLKQLLLSDNCLKDLSQPRGTASSSVLQNDCKPNGRLKYSPETSSFQRNLSLPASGPLDLKISQSAPVGSSPRSGSPWGGHVARQESPQLNLVPVNSEAEGPIRWVIRGDDKCDVNKDYPRLTKSNPILYYMLQKGNSSLSKEGKQRRAQVVCPSEPVQYGLHVQIKQEPTSEEESYNHGLNLKRYAQSRLHKNHNGGLSDILEKVPAVKTESD
SIO_010081: LOC121302672
subclass of: SO_0000673
so part of: LOC121302672
location: 105327..108794
location: region:105327-108794:1
so has part: feature:105327-108794:1:exon

XP_041088654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105327-108794:1:exon

LOC121302672
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302672
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1-like
translation: MTHGEEPGSEMHQDSVVLTYLEGLLMHQVEGGLGAAATRRSDVGHSVQDQNNKPASSYLLPSHGSCPEERRTGPGSGTQHLKKARLLQSTEAWSAPERHRLPDPAVDLNGQSRELLTGALGDSPKCKQESTLLASLLQSFSSRLQSVALSQQIMQSLQHQGYPRSDESAPDEEEALGCYGIASSRLKGLMKRKNKVPSRSSVPYRRRNSQERASESPQAAPPASEPLSCAARLKAVASLVEHRSSPAASPKPSVACSQLALLLSSEAHLQQYSREQALKSKLAVRSASERLAAIASQKQQDNTQTQLPNSSPLNGQCGSLLKSADSSKHNPTPSPGHSSSSRNPSSLRDRGSFVKPSPRASPYCSSLLLQLLNNHNTQKQVNGHRVMEGSYHAFPNHSSPALRSAREYSNQDNSLTEDSSDAESFHSRCSPIDLSLRARASRPSFGSAGSLETLTESLISNWNPETPRLHTPETRPRENASVTKPYQKVTLLQLLLDHKNNEKTDMSSDKRELQKGFSPEHRSAPAESVIPVRKCEESMKRSSPDALNFGKVETLPKFHHSQEAAVVASSPSASLYSLRPPSRMQGIPAPTPLLDLRKSSNDNTSAGGAGASPHEAAQEASFSASKLLQNLAQCGLQNSAQSLFPSQPSVLANKRQTFEMKADKPVALLERLSAPVTRNTSPVLEEASMNMRKPASLAESCVASRSEIENLLERRSVLQLLMGTGDSKEKTLFKRKRSASKVGLPERQPSQSYSSGDLIEPVLQVKIKTEPKEETSTSEYECEADTSQSEERSEKQHSPVPLPVSAPPRDMKQEPGTIAQEPIPRDGLLSQLLKQPPSAYHANKHTGGNMNNLKETQTLNQGTVVPKKRKLCLSSEEHFLSPVRMEVSNEQHTSSMEPLCKPSEKRLSRDTGTQVEVEAVGHVGCSASESPGCAKDGKDFNVLKQLLLSDNCLKDLSQPRGTASSSVLQNDCKPNGRLKYSPETSSFQRNLSLPASGPLDLKISQSAPVGSSPRSGSPWGGHVARQESPQLNLVPVNSEAEGPIRWVIRGDDKCDVNKDYPRLTKSNPILYYMLQKGNSSLSKEGKQRRAQVVCPSEPVQYGLHVQIKQEPTSEEESYNHGLNLKRYAQSRLHKNHNGGLSDILEKVPAVKTESD
SIO_010081: LOC121302672
subclass of: SO_0000673
so part of: LOC121302672
location: 105327..108794
location: region:105327-108794:1
so has part: feature:105327-108794:1:exon

XP_041088655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105327-108794:1:exon

LOC121302672
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302672
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1-like
translation: MTHGEEPGSEMHQDSVVLTYLEGLLMHQVEGGLGAAATRRSDVGHSVQDQNNKPASSYLLPSHGSCPEERRTGPGSGTQHLKKARLLQSTEAWSAPERHRLPDPAVDLNGQSRELLTGALGDSPKCKQESTLLASLLQSFSSRLQSVALSQQIMQSLQHQGYPRSDESAPDEEEALGCYGIASSRLKGLMKRKNKVPSRSSVPYRRRNSQERASESPQAAPPASEPLSCAARLKAVASLVEHRSSPAASPKPSVACSQLALLLSSEAHLQQYSREQALKSKLAVRSASERLAAIASQKQQDNTQTQLPNSSPLNGQCGSLLKSADSSKHNPTPSPGHSSSSRNPSSLRDRGSFVKPSPRASPYCSSLLLQLLNNHNTQKQVNGHRVMEGSYHAFPNHSSPALRSAREYSNQDNSLTEDSSDAESFHSRCSPIDLSLRARASRPSFGSAGSLETLTESLISNWNPETPRLHTPETRPRENASVTKPYQKVTLLQLLLDHKNNEKTDMSSDKRELQKGFSPEHRSAPAESVIPVRKCEESMKRSSPDALNFGKVETLPKFHHSQEAAVVASSPSASLYSLRPPSRMQGIPAPTPLLDLRKSSNDNTSAGGAGASPHEAAQEASFSASKLLQNLAQCGLQNSAQSLFPSQPSVLANKRQTFEMKADKPVALLERLSAPVTRNTSPVLEEASMNMRKPASLAESCVASRSEIENLLERRSVLQLLMGTGDSKEKTLFKRKRSASKVGLPERQPSQSYSSGDLIEPVLQVKIKTEPKEETSTSEYECEADTSQSEERSEKQHSPVPLPVSAPPRDMKQEPGTIAQEPIPRDGLLSQLLKQPPSAYHANKHTGGNMNNLKETQTLNQGTVVPKKRKLCLSSEEHFLSPVRMEVSNEQHTSSMEPLCKPSEKRLSRDTGTQVEVEAVGHVGCSASESPGCAKDGKDFNVLKQLLLSDNCLKDLSQPRGTASSSVLQNDCKPNGRLKYSPETSSFQRNLSLPASGPLDLKISQSAPVGSSPRSGSPWGGHVARQESPQLNLVPVNSEAEGPIRWVIRGDDKCDVNKDYPRLTKSNPILYYMLQKGNSSLSKEGKQRRAQVVCPSEPVQYGLHVQIKQEPTSEEESYNHGLNLKRYAQSRLHKNHNGGLSDILEKVPAVKTESD
SIO_010081: LOC121302672
subclass of: SO_0000673
so part of: LOC121302672
location: 105327..108794
location: region:105327-108794:1
so has part: feature:105327-108794:1:exon

XP_041088656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105327-108794:1:exon

LOC121302672
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302672
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1-like
translation: MTHGEEPGSEMHQDSVVLTYLEGLLMHQVEGGLGAAATRRSDVGHSVQDQNNKPASSYLLPSHGSCPEERRTGPGSGTQHLKKARLLQSTEAWSAPERHRLPDPAVDLNGQSRELLTGALGDSPKCKQESTLLASLLQSFSSRLQSVALSQQIMQSLQHQGYPRSDESAPDEEEALGCYGIASSRLKGLMKRKNKVPSRSSVPYRRRNSQERASESPQAAPPASEPLSCAARLKAVASLVEHRSSPAASPKPSVACSQLALLLSSEAHLQQYSREQALKSKLAVRSASERLAAIASQKQQDNTQTQLPNSSPLNGQCGSLLKSADSSKHNPTPSPGHSSSSRNPSSLRDRGSFVKPSPRASPYCSSLLLQLLNNHNTQKQVNGHRVMEGSYHAFPNHSSPALRSAREYSNQDNSLTEDSSDAESFHSRCSPIDLSLRARASRPSFGSAGSLETLTESLISNWNPETPRLHTPETRPRENASVTKPYQKVTLLQLLLDHKNNEKTDMSSDKRELQKGFSPEHRSAPAESVIPVRKCEESMKRSSPDALNFGKVETLPKFHHSQEAAVVASSPSASLYSLRPPSRMQGIPAPTPLLDLRKSSNDNTSAGGAGASPHEAAQEASFSASKLLQNLAQCGLQNSAQSLFPSQPSVLANKRQTFEMKADKPVALLERLSAPVTRNTSPVLEEASMNMRKPASLAESCVASRSEIENLLERRSVLQLLMGTGDSKEKTLFKRKRSASKVGLPERQPSQSYSSGDLIEPVLQVKIKTEPKEETSTSEYECEADTSQSEERSEKQHSPVPLPVSAPPRDMKQEPGTIAQEPIPRDGLLSQLLKQPPSAYHANKHTGGNMNNLKETQTLNQGTVVPKKRKLCLSSEEHFLSPVRMEVSNEQHTSSMEPLCKPSEKRLSRDTGTQVEVEAVGHVGCSASESPGCAKDGKDFNVLKQLLLSDNCLKDLSQPRGTASSSVLQNDCKPNGRLKYSPETSSFQRNLSLPASGPLDLKISQSAPVGSSPRSGSPWGGHVARQESPQLNLVPVNSEAEGPIRWVIRGDDKCDVNKDYPRLTKSNPILYYMLQKGNSSLSKEGKQRRAQVVCPSEPVQYGLHVQIKQEPTSEEESYNHGLNLKRYAQSRLHKNHNGGLSDILEKVPAVKTESD
SIO_010081: LOC121302672
subclass of: SO_0000673
so part of: LOC121302672
location: 105327..108794
location: region:105327-108794:1
so has part: feature:105327-108794:1:exon

XP_041088658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105327-108794:1:exon

LOC121302672
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302672
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor-interacting protein 1-like
translation: MTHGEEPGSEMHQDSVVLTYLEGLLMHQVEGGLGAAATRRSDVGHSVQDQNNKPASSYLLPSHGSCPEERRTGPGSGTQHLKKARLLQSTEAWSAPERHRLPDPAVDLNGQSRELLTGALGDSPKCKQESTLLASLLQSFSSRLQSVALSQQIMQSLQHQGYPRSDESAPDEEEALGCYGIASSRLKGLMKRKNKVPSRSSVPYRRRNSQERASESPQAAPPASEPLSCAARLKAVASLVEHRSSPAASPKPSVACSQLALLLSSEAHLQQYSREQALKSKLAVRSASERLAAIASQKQQDNTQTQLPNSSPLNGQCGSLLKSADSSKHNPTPSPGHSSSSRNPSSLRDRGSFVKPSPRASPYCSSLLLQLLNNHNTQKQVNGHRVMEGSYHAFPNHSSPALRSAREYSNQDNSLTEDSSDAESFHSRCSPIDLSLRARASRPSFGSAGSLETLTESLISNWNPETPRLHTPETRPRENASVTKPYQKVTLLQLLLDHKNNEKTDMSSDKRELQKGFSPEHRSAPAESVIPVRKCEESMKRSSPDALNFGKVETLPKFHHSQEAAVVASSPSASLYSLRPPSRMQGIPAPTPLLDLRKSSNDNTSAGGAGASPHEAAQEASFSASKLLQNLAQCGLQNSAQSLFPSQPSVLANKRQTFEMKADKPVALLERLSAPVTRNTSPVLEEASMNMRKPASLAESCVASRSEIENLLERRSVLQLLMGTGDSKEKTLFKRKRSASKVGLPERQPSQSYSSGDLIEPVLQVKIKTEPKEETSTSEYECEADTSQSEERSEKQHSPVPLPVSAPPRDMKQEPGTIAQEPIPRDGLLSQLLKQPPSAYHANKHTGGNMNNLKETQTLNQGTVVPKKRKLCLSSEEHFLSPVRMEVSNEQHTSSMEPLCKPSEKRLSRDTGTQVEVEAVGHVGCSASESPGCAKDGKDFNVLKQLLLSDNCLKDLSQPRGTASSSVLQNDCKPNGRLKYSPETSSFQRNLSLPASGPLDLKISQSAPVGSSPRSGSPWGGHVARQESPQLNLVPVNSEAEGPIRWVIRGDDKCDVNKDYPRLTKSNPILYYMLQKGNSSLSKEGKQRRAQVVCPSEPVQYGLHVQIKQEPTSEEESYNHGLNLKRYAQSRLHKNHNGGLSDILEKVPAVKTESD
SIO_010081: LOC121302672
subclass of: SO_0000673
so part of: LOC121302672
location: 105327..108794
location: region:105327-108794:1
so has part: feature:105327-108794:1:exon

XP_041088659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105327-108794:1:exon

hspa13
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: hspa13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 119323..124158
location: region:119323-124158:1
so has part: feature:119323-124158:1:exon
subclass of: SO_0000010

121302676
type: Gene
SIO_000068: ncbigene

position:119323:1
position: 119323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124158:1
position: 124158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119323-124158:1:exon

hspa13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: hspa13
product: heat shock protein 70 family, member 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041232735.1
SIO_010081: hspa13
subclass of: SO_0000673
so part of: hspa13
location: join(119323..119383,120186..120526,121005..121218,121326..121493,123004..124158)
location: region:119323-124158:1
so has part: feature:119323-119383:1:exon
so has part: feature:120186-120526:1:exon
so has part: feature:121005-121218:1:exon
so has part: feature:121326-121493:1:exon
so has part: feature:123004-124158:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119323-119383:1:exon

position:119383:1
position: 119383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:120186-120526:1:exon

position:120186:1
position: 120186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120526:1
position: 120526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:121005-121218:1:exon

position:121005:1
position: 121005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121218:1
position: 121218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:121326-121493:1:exon

position:121326:1
position: 121326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121493:1
position: 121493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:123004-124158:1:exon

position:123004:1
position: 123004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hspa13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: hspa13
product: heat shock protein 70 family, member 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_041232736.1
SIO_010081: hspa13
subclass of: SO_0000673
so part of: hspa13
location: join(119323..119383,120186..120526,121005..121218,123004..124158)
location: region:119323-124158:1
so has part: feature:119323-119383:1:exon
so has part: feature:120186-120526:1:exon
so has part: feature:121005-121218:1:exon
so has part: feature:123004-124158:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119323-119383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:120186-120526:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121005-121218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123004-124158:1:exon

hspa13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: hspa13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 13 isoform X1
translation: MAGEMSILGSAILALFLAGYLGQQYLPPPKPKVIGIDLGTTFCSVGVFHPGLGEVEVIGDLQGRKSIPSVVSFTVSGIHSGYEGQDLADANPLNTIYDAKRFIGKLFTPEDLERESAPYQFQVLHHNGSAEFSISTNRTFTVTPEYIGSRLLLNMKKMAEGHLGVPISKAVISVPADFDERQRNYTVQAANLAGLEVLRVINEPTAAAMAYGLHKVDVLNVLVVDLGGGTLDVSLLNKQGGMFLTRAMAGNNKLGGQDFNQRLLQHVFTRVHEQYGALPSHEGDIHTLRQAVEAAKLNLTLGQTSLIRVPLSLRGSAGSVVYEDVLTRQLFEDLNADLFQKILTPIEEVLREGRLDKSEVDEIVLVGGSTRIPRIRQIIAQYFGMEPNTSVDPELAVVIGVALQAGIMGGSWPLQVSAIEIPNRHLRKSNFL
SIO_010081: hspa13
subclass of: SO_0000673
so part of: hspa13
location: join(119359..119383,120186..120526,121005..121218,121326..121493,123004..123554)
location: region:119359-123554:1
so has part: feature:119359-119383:1:exon
so has part: feature:120186-120526:1:exon
so has part: feature:121005-121218:1:exon
so has part: feature:121326-121493:1:exon
so has part: feature:123004-123554:1:exon

XP_041088669.1
type: Protein
SIO_000068: ncbiprotein

position:119359:1
position: 119359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123554:1
position: 123554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119359-119383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:120186-120526:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121005-121218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:121326-121493:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:123004-123554:1:exon

hspa13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: hspa13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 13 isoform X2
translation: MAGEMSILGSAILALFLAGYLGQQYLPPPKPKVIGIDLGTTFCSVGVFHPGLGEVEVIGDLQGRKSIPSVVSFTVSGIHSGYEGQDLADANPLNTIYDAKRFIGKLFTPEDLERESAPYQFQVLHHNGSAEFSISTNRTFTVTPEYIGSRLLLNMKKMAEGHLGVPISKAVISVPADFDERQRNYTVQAANLAGNNKLGGQDFNQRLLQHVFTRVHEQYGALPSHEGDIHTLRQAVEAAKLNLTLGQTSLIRVPLSLRGSAGSVVYEDVLTRQLFEDLNADLFQKILTPIEEVLREGRLDKSEVDEIVLVGGSTRIPRIRQIIAQYFGMEPNTSVDPELAVVIGVALQAGIMGGSWPLQVSAIEIPNRHLRKSNFL
SIO_010081: hspa13
subclass of: SO_0000673
so part of: hspa13
location: join(119359..119383,120186..120526,121005..121218,123004..123554)
location: region:119359-123554:1
so has part: feature:119359-119383:1:exon
so has part: feature:120186-120526:1:exon
so has part: feature:121005-121218:1:exon
so has part: feature:123004-123554:1:exon

XP_041088670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119359-119383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:120186-120526:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121005-121218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123004-123554:1:exon

gdpd5b
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: gdpd5b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(124787..143375)
location: region:124787-143375:-1
so has part: feature:124787-143375:-1:exon
subclass of: SO_0000010

121302675
type: Gene
SIO_000068: ncbigene

position:124787:-1
position: 124787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143375:-1
position: 143375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124787-143375:-1:exon

gdpd5b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: gdpd5b
product: glycerophosphodiester phosphodiesterase domain containing 5b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_041232731.1
SIO_010081: gdpd5b
subclass of: SO_0000673
so part of: gdpd5b
location: complement(join(124787..127137,127599..127711,132977..133059,133812..133959,134152..134309,135615..135836,136354..136504,137364..137446,138997..139181,141903..141996,142345..142443,142755..142814,143294..143375))
location: region:124787-143375:-1
so has part: feature:143294-143375:-1:exon
so has part: feature:142755-142814:-1:exon
so has part: feature:142345-142443:-1:exon
so has part: feature:141903-141996:-1:exon
so has part: feature:138997-139181:-1:exon
so has part: feature:137364-137446:-1:exon
so has part: feature:136354-136504:-1:exon
so has part: feature:135615-135836:-1:exon
so has part: feature:134152-134309:-1:exon
so has part: feature:133812-133959:-1:exon
so has part: feature:132977-133059:-1:exon
so has part: feature:127599-127711:-1:exon
so has part: feature:124787-127137:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:143294-143375:-1:exon

position:143294:-1
position: 143294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:142755-142814:-1:exon

position:142755:-1
position: 142755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142814:-1
position: 142814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:142345-142443:-1:exon

position:142345:-1
position: 142345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142443:-1
position: 142443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:141903-141996:-1:exon

position:141903:-1
position: 141903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141996:-1
position: 141996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:138997-139181:-1:exon

position:138997:-1
position: 138997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139181:-1
position: 139181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:137364-137446:-1:exon

position:137364:-1
position: 137364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137446:-1
position: 137446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:136354-136504:-1:exon

position:136354:-1
position: 136354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136504:-1
position: 136504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:135615-135836:-1:exon

position:135615:-1
position: 135615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135836:-1
position: 135836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:134152-134309:-1:exon

position:134152:-1
position: 134152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134309:-1
position: 134309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:133812-133959:-1:exon

position:133812:-1
position: 133812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133959:-1
position: 133959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:132977-133059:-1:exon

position:132977:-1
position: 132977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133059:-1
position: 133059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:127599-127711:-1:exon

position:127599:-1
position: 127599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127711:-1
position: 127711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:124787-127137:-1:exon

position:127137:-1
position: 127137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gdpd5b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: gdpd5b
product: glycerophosphodiester phosphodiesterase domain containing 5b, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041232734.1
SIO_010081: gdpd5b
subclass of: SO_0000673
so part of: gdpd5b
location: complement(join(124787..127137,127599..127711,130013..130027,132977..133059,133812..133959,134152..134309,135615..135836,136354..136504,137364..137446,138880..138970))
location: region:124787-138970:-1
so has part: feature:138880-138970:-1:exon
so has part: feature:137364-137446:-1:exon
so has part: feature:136354-136504:-1:exon
so has part: feature:135615-135836:-1:exon
so has part: feature:134152-134309:-1:exon
so has part: feature:133812-133959:-1:exon
so has part: feature:132977-133059:-1:exon
so has part: feature:130013-130027:-1:exon
so has part: feature:127599-127711:-1:exon
so has part: feature:124787-127137:-1:exon

position:138970:-1
position: 138970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138880-138970:-1:exon

position:138880:-1
position: 138880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:137364-137446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136354-136504:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:135615-135836:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134152-134309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133812-133959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:132977-133059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:130013-130027:-1:exon

position:130013:-1
position: 130013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130027:-1
position: 130027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:127599-127711:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:124787-127137:-1:exon

gdpd5b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: gdpd5b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1
translation: MNLHWLHKFAVTVTLVVTVISVISMEQLWGEEWDILLLSFQATGPFLHLGALAAITLLAWLVAGQFARAEKNSFQAVLLLTYLTVLTALYLVPLSITSPCLMEKSNLGPKPAIIGHQGAPMVRSVPELCRQAPMLAPENTLMSFQKAIEQAASGLYTDVTISHDGVPFLMHDNTLRRTTDVEKLFPERVGQDSSMFNWTDLQALNAGQWFLKDDPFWTVSSLSEADWALAGNQSVCTLSEVLQLAENSSKSILFNVRRPPPEHPHRESWINVTLHTVLQSGVQQQHVMWTPDTDRQLVRQKAPGFQQTSTVKKSVKILQEEGIVRLNLRYNQASAQEIRDSREGNVSLTLFTVSEPWLYSVLWCSGVQSVTSDAPHILRKLLYPIWIMPPDEYKLLWITADVISFIVIIGVFVLQKWRLGSIRSYNPEQIMLSAAVRRSSREVNIMKEKLIFSEVNNGLGSAEELSLYSANGYEGYTNEAITPRDQQHNARMQTNYAQKTL
SIO_010081: gdpd5b
subclass of: SO_0000673
so part of: gdpd5b
location: complement(join(126992..127137,127599..127711,132977..133059,133812..133959,134152..134309,135615..135836,136354..136504,137364..137446,138997..139181,141903..141996,142345..142443,142755..142778))
location: region:126992-142778:-1
so has part: feature:142755-142778:-1:exon
so has part: feature:142345-142443:-1:exon
so has part: feature:141903-141996:-1:exon
so has part: feature:138997-139181:-1:exon
so has part: feature:137364-137446:-1:exon
so has part: feature:136354-136504:-1:exon
so has part: feature:135615-135836:-1:exon
so has part: feature:134152-134309:-1:exon
so has part: feature:133812-133959:-1:exon
so has part: feature:132977-133059:-1:exon
so has part: feature:127599-127711:-1:exon
so has part: feature:126992-127137:-1:exon

XP_041088665.1
type: Protein
SIO_000068: ncbiprotein

position:126992:-1
position: 126992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142778:-1
position: 142778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142755-142778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142345-142443:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141903-141996:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138997-139181:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:137364-137446:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:136354-136504:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135615-135836:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:134152-134309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133812-133959:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:132977-133059:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:127599-127711:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:126992-127137:-1:exon

gdpd5b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: gdpd5b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X3
translation: MVRSDPELCRKAPVVRSDPELCRQAPMLAPENTLMSFQKAIEQAASGLYTDVTISHDGVPFLMHDNTLRRTTDVEKLFPERVGQDSSMFNWTDLQALNAGQWFLKDDPFWTVSSLSEADWALAGNQSVCTLSEVLQLAENSSKSILFNVRRPPPEHPHRESWINVTLHTVLQSGVQQQHVMWTPDTDRQLVRQKAPGFQQTSTVKKSVKILQEEGIVRLNLRYNQASAQEIRDSREGNVSLTLFTVSEPWLYSVLWCSGVQSVTSDAPHILRKLLYPIWIMPPDEYKLLWITADVISFIVIIGVFVLQNYHMIRWRLGSIRSYNPEQIMLSAAVRRSSREVNIMKEKLIFSEVNNGLGSAEELSLYSANGYEGYTNEAITPRDQQHNARMQTNYAQKTL
SIO_010081: gdpd5b
subclass of: SO_0000673
so part of: gdpd5b
location: complement(join(126992..127137,127599..127711,130013..130027,132977..133059,133812..133959,134152..134309,135615..135836,136354..136504,137364..137446,138880..138960))
location: region:126992-138960:-1
so has part: feature:138880-138960:-1:exon
so has part: feature:137364-137446:-1:exon
so has part: feature:136354-136504:-1:exon
so has part: feature:135615-135836:-1:exon
so has part: feature:134152-134309:-1:exon
so has part: feature:133812-133959:-1:exon
so has part: feature:132977-133059:-1:exon
so has part: feature:130013-130027:-1:exon
so has part: feature:127599-127711:-1:exon
so has part: feature:126992-127137:-1:exon

XP_041088668.1
type: Protein
SIO_000068: ncbiprotein

position:138960:-1
position: 138960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138880-138960:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137364-137446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136354-136504:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:135615-135836:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134152-134309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133812-133959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:132977-133059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:130013-130027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:127599-127711:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:126992-127137:-1:exon

gdpd5b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: gdpd5b
product: glycerophosphodiester phosphodiesterase domain containing 5b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041232732.1
SIO_010081: gdpd5b
subclass of: SO_0000673
so part of: gdpd5b
location: complement(join(129994..130027,132977..133059,133812..133959,134152..134309,135615..135836,136354..136504,137364..137446,138997..139181,141903..141996,142345..142443,142755..142814,143294..143375))
location: region:129994-143375:-1
so has part: feature:143294-143375:-1:exon
so has part: feature:142755-142814:-1:exon
so has part: feature:142345-142443:-1:exon
so has part: feature:141903-141996:-1:exon
so has part: feature:138997-139181:-1:exon
so has part: feature:137364-137446:-1:exon
so has part: feature:136354-136504:-1:exon
so has part: feature:135615-135836:-1:exon
so has part: feature:134152-134309:-1:exon
so has part: feature:133812-133959:-1:exon
so has part: feature:132977-133059:-1:exon
so has part: feature:129994-130027:-1:exon

position:129994:-1
position: 129994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143294-143375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142755-142814:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142345-142443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141903-141996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:138997-139181:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:137364-137446:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:136354-136504:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135615-135836:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:134152-134309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133812-133959:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:132977-133059:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:129994-130027:-1:exon

gdpd5b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: gdpd5b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X2
translation: MNLHWLHKFAVTVTLVVTVISVISMEQLWGEEWDILLLSFQATGPFLHLGALAAITLLAWLVAGQFARAEKNSFQAVLLLTYLTVLTALYLVPLSITSPCLMEKSNLGPKPAIIGHQGAPMVRSVPELCRQAPMLAPENTLMSFQKAIEQAASGLYTDVTISHDGVPFLMHDNTLRRTTDVEKLFPERVGQDSSMFNWTDLQALNAGQWFLKDDPFWTVSSLSEADWALAGNQSVCTLSEVLQLAENSSKSILFNVRRPPPEHPHRESWINVTLHTVLQSGVQQQHVMWTPDTDRQLVRQKAPGFQQTSTVKKSVKILQEEGIVRLNLRYNQASAQEIRDSREGNVSLTLFTVSEPWLYSVLWCSGVQSVTSDAPHILRKLLYPIWIMPPDEYKLLWITADVISFIVIIGVFVLQNYHMIR
SIO_010081: gdpd5b
subclass of: SO_0000673
so part of: gdpd5b
location: complement(join(130009..130027,132977..133059,133812..133959,134152..134309,135615..135836,136354..136504,137364..137446,138997..139181,141903..141996,142345..142443,142755..142778))
location: region:130009-142778:-1
so has part: feature:142755-142778:-1:exon
so has part: feature:142345-142443:-1:exon
so has part: feature:141903-141996:-1:exon
so has part: feature:138997-139181:-1:exon
so has part: feature:137364-137446:-1:exon
so has part: feature:136354-136504:-1:exon
so has part: feature:135615-135836:-1:exon
so has part: feature:134152-134309:-1:exon
so has part: feature:133812-133959:-1:exon
so has part: feature:132977-133059:-1:exon
so has part: feature:130009-130027:-1:exon

XP_041088666.1
type: Protein
SIO_000068: ncbiprotein

position:130009:-1
position: 130009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142755-142778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142345-142443:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141903-141996:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138997-139181:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:137364-137446:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:136354-136504:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135615-135836:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:134152-134309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133812-133959:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:132977-133059:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:130009-130027:-1:exon

cxadr
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: cxadr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(163264..168553)
location: region:163264-168553:-1
so has part: feature:163264-168553:-1:exon
subclass of: SO_0000010

121302736
type: Gene
SIO_000068: ncbigene

position:163264:-1
position: 163264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168553:-1
position: 168553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163264-168553:-1:exon

cxadr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: cxadr
product: CXADR Ig-like cell adhesion molecule
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041232856.1
SIO_010081: cxadr
subclass of: SO_0000673
so part of: cxadr
location: complement(join(163264..165689,166723..166861,167629..167751,168372..168553))
location: region:163264-168553:-1
so has part: feature:168372-168553:-1:exon
so has part: feature:167629-167751:-1:exon
so has part: feature:166723-166861:-1:exon
so has part: feature:163264-165689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:168372-168553:-1:exon

position:168372:-1
position: 168372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:167629-167751:-1:exon

position:167629:-1
position: 167629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167751:-1
position: 167751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:166723-166861:-1:exon

position:166723:-1
position: 166723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166861:-1
position: 166861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:163264-165689:-1:exon

position:165689:-1
position: 165689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cxadr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: cxadr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coxsackievirus and adenovirus receptor homolog
translation: MKCKSAEGTNPIQYTWERISGTRILPATALLDRVQGSIMIKNATFDNSGTYRCVSENRVGKEQCTLSMSVVPPSNTAGTIAGGVVGVLLVLLLLAVVLYCCYKNRNEKKYEKETSHEIREDVPPPQSRVSTARSFVGVGSNRSSLGSMSPSNLHEYALKQAQYDPVPSEEYERPPSHAPHAPPSKVAAPNLSRMGGVPVMIPAQSRGGSIV
SIO_010081: cxadr
subclass of: SO_0000673
so part of: cxadr
location: complement(join(165410..165689,166723..166861,167629..167751,168372..168465))
location: region:165410-168465:-1
so has part: feature:168372-168465:-1:exon
so has part: feature:167629-167751:-1:exon
so has part: feature:166723-166861:-1:exon
so has part: feature:165410-165689:-1:exon

XP_041088790.1
type: Protein
SIO_000068: ncbiprotein

position:165410:-1
position: 165410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168465:-1
position: 168465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168372-168465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167629-167751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166723-166861:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165410-165689:-1:exon

zgc:112083
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: zgc:112083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(186084..195400)
location: region:186084-195400:-1
so has part: feature:186084-195400:-1:exon
subclass of: SO_0000010

121302923
type: Gene
SIO_000068: ncbigene

position:186084:-1
position: 186084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195400:-1
position: 195400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186084-195400:-1:exon

zgc:112083
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: zgc:112083
product: zgc:112083, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_041233277.1
SIO_010081: zgc:112083
subclass of: SO_0000673
so part of: zgc:112083
location: complement(join(186084..186323,186399..186795,187135..187259,187775..187913,188501..188621,190230..190304,190692..190844,191927..192038,192996..193222,193631..193783,195266..195400))
location: region:186084-195400:-1
so has part: feature:195266-195400:-1:exon
so has part: feature:193631-193783:-1:exon
so has part: feature:192996-193222:-1:exon
so has part: feature:191927-192038:-1:exon
so has part: feature:190692-190844:-1:exon
so has part: feature:190230-190304:-1:exon
so has part: feature:188501-188621:-1:exon
so has part: feature:187775-187913:-1:exon
so has part: feature:187135-187259:-1:exon
so has part: feature:186399-186795:-1:exon
so has part: feature:186084-186323:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:195266-195400:-1:exon

position:195266:-1
position: 195266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:193631-193783:-1:exon

position:193631:-1
position: 193631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193783:-1
position: 193783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:192996-193222:-1:exon

position:192996:-1
position: 192996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193222:-1
position: 193222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:191927-192038:-1:exon

position:191927:-1
position: 191927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192038:-1
position: 192038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:190692-190844:-1:exon

position:190692:-1
position: 190692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190844:-1
position: 190844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:190230-190304:-1:exon

position:190230:-1
position: 190230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190304:-1
position: 190304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:188501-188621:-1:exon

position:188501:-1
position: 188501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188621:-1
position: 188621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:187775-187913:-1:exon

position:187775:-1
position: 187775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187913:-1
position: 187913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:187135-187259:-1:exon

position:187135:-1
position: 187135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187259:-1
position: 187259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:186399-186795:-1:exon

position:186399:-1
position: 186399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186795:-1
position: 186795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:186084-186323:-1:exon

position:186323:-1
position: 186323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

zgc:112083
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: zgc:112083
product: zgc:112083, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_041233274.1
SIO_010081: zgc:112083
subclass of: SO_0000673
so part of: zgc:112083
location: complement(join(186084..186795,187135..187259,187775..187913,188501..188621,190230..190304,190692..190844,191927..192038,192996..193222,193631..193783,195266..195400))
location: region:186084-195400:-1
so has part: feature:195266-195400:-1:exon
so has part: feature:193631-193783:-1:exon
so has part: feature:192996-193222:-1:exon
so has part: feature:191927-192038:-1:exon
so has part: feature:190692-190844:-1:exon
so has part: feature:190230-190304:-1:exon
so has part: feature:188501-188621:-1:exon
so has part: feature:187775-187913:-1:exon
so has part: feature:187135-187259:-1:exon
so has part: feature:186084-186795:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:195266-195400:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193631-193783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192996-193222:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191927-192038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190692-190844:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:190230-190304:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188501-188621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:187775-187913:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:187135-187259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:186084-186795:-1:exon

zgc:112083
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: zgc:112083
product: zgc:112083, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041233276.1
SIO_010081: zgc:112083
subclass of: SO_0000673
so part of: zgc:112083
location: complement(join(186084..186795,187135..187259,187775..187913,188501..188621,190230..190304,190692..190844,191927..192038,192996..193222,193631..193783,194170..194199))
location: region:186084-194199:-1
so has part: feature:194170-194199:-1:exon
so has part: feature:193631-193783:-1:exon
so has part: feature:192996-193222:-1:exon
so has part: feature:191927-192038:-1:exon
so has part: feature:190692-190844:-1:exon
so has part: feature:190230-190304:-1:exon
so has part: feature:188501-188621:-1:exon
so has part: feature:187775-187913:-1:exon
so has part: feature:187135-187259:-1:exon
so has part: feature:186084-186795:-1:exon

position:194199:-1
position: 194199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194170-194199:-1:exon

position:194170:-1
position: 194170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:193631-193783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192996-193222:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191927-192038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190692-190844:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:190230-190304:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188501-188621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:187775-187913:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:187135-187259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:186084-186795:-1:exon

zgc:112083
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: zgc:112083
product: zgc:112083, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041233275.1
SIO_010081: zgc:112083
subclass of: SO_0000673
so part of: zgc:112083
location: complement(join(186084..186795,187135..187259,187775..187913,188501..188621,190230..190304,190692..190844,191927..192038,192996..193222,193631..194161))
location: region:186084-194161:-1
so has part: feature:193631-194161:-1:exon
so has part: feature:192996-193222:-1:exon
so has part: feature:191927-192038:-1:exon
so has part: feature:190692-190844:-1:exon
so has part: feature:190230-190304:-1:exon
so has part: feature:188501-188621:-1:exon
so has part: feature:187775-187913:-1:exon
so has part: feature:187135-187259:-1:exon
so has part: feature:186084-186795:-1:exon

position:194161:-1
position: 194161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193631-194161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192996-193222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191927-192038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:190692-190844:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190230-190304:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188501-188621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187775-187913:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:187135-187259:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:186084-186795:-1:exon

zgc:112083
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: zgc:112083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zgc:112083 isoform X2
translation: MAKKSKPSELVVSCEWASCSFKGKSMEELCDHTALHLKEHLGDGEALEELDDYSCLWNGCEFIAIGSPRELVVHVNFHTFHAKLKCIGSQLLLSHPELRPCSQDLHSKNLVPELSGAFECQWEHCDSTFNNPEWFYRHVDMHAQCTEKEPLPNRQDALVCCWRGCDATFRIKYRLREHLRSHTQERVVACPTCGCMFASNTKFFDHIQRQCVSEESLVCEHCDKPFANERLLRDHVRQHVNHIKCPLCDMTCTTLASLRTHIKFRHCDERPFQCDFCESSFKNPHDLRKHTETHNEGAAYHCDVEGCTYSSRMAHSMSQHYKRVHEGDMVAKYKCHLCDKCFSWCYTLTLHLRKKHQLKWPSGHSRFRYKEDEDGYLRLNMVRYETVEVTEQIMKNMVRKRTPRKLWSSQPRRSGPAAGGESSQSSGMETEPQPVCCALSNVTQEQGQELHTHSMEPEPQPVCCALSNVTQEQGQELHTHSMEPEPQPVYCALSNVTQEQGQELHTHSSGAVEALTEVARGLGIQIV
SIO_010081: zgc:112083
subclass of: SO_0000673
so part of: zgc:112083
location: complement(join(186240..186323,186399..186795,187135..187259,187775..187913,188501..188621,190230..190304,190692..190844,191927..192038,192996..193222,193631..193781))
location: region:186240-193781:-1
so has part: feature:193631-193781:-1:exon
so has part: feature:192996-193222:-1:exon
so has part: feature:191927-192038:-1:exon
so has part: feature:190692-190844:-1:exon
so has part: feature:190230-190304:-1:exon
so has part: feature:188501-188621:-1:exon
so has part: feature:187775-187913:-1:exon
so has part: feature:187135-187259:-1:exon
so has part: feature:186399-186795:-1:exon
so has part: feature:186240-186323:-1:exon

XP_041089211.1
type: Protein
SIO_000068: ncbiprotein

position:186240:-1
position: 186240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193781:-1
position: 193781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193631-193781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192996-193222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191927-192038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:190692-190844:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190230-190304:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188501-188621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187775-187913:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:187135-187259:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:186399-186795:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:186240-186323:-1:exon

zgc:112083
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: zgc:112083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zgc:112083 isoform X1
translation: MAKKSKPSELVVSCEWASCSFKGKSMEELCDHTALHLKEHLGDGEALEELDDYSCLWNGCEFIAIGSPRELVVHVNFHTFHAKLKCIGSQLLLSHPELRPCSQDLHSKNLVPELSGAFECQWEHCDSTFNNPEWFYRHVDMHAQCTEKEPLPNRQDALVCCWRGCDATFRIKYRLREHLRSHTQERVVACPTCGCMFASNTKFFDHIQRQCVSEESLVCEHCDKPFANERLLRDHVRQHVNHIKCPLCDMTCTTLASLRTHIKFRHCDERPFQCDFCESSFKNPHDLRKHTETHNEGAAYHCDVEGCTYSSRMAHSMSQHYKRVHEGDMVAKYKCHLCDKCFSWCYTLTLHLRKKHQLKWPSGHSRFRYKEDEDGYLRLNMVRYETVEVTEQIMKNMVRKRTPRKLWSSQPRRSGPAAGGESSQSSGMETEPQPVCCALSNVTQEQGQELHTHSMEPEPQPVCCALSNVTQEQGQELHTHSMEPEPQPVYCALSNVTQEQGQGLHTHSMEPEPQPVYCALSNVTQGQELHTHSSGAVEALTEVARGLGIQIV
SIO_010081: zgc:112083
subclass of: SO_0000673
so part of: zgc:112083
location: complement(join(186240..186795,187135..187259,187775..187913,188501..188621,190230..190304,190692..190844,191927..192038,192996..193222,193631..193781))
location: region:186240-193781:-1
so has part: feature:193631-193781:-1:exon
so has part: feature:192996-193222:-1:exon
so has part: feature:191927-192038:-1:exon
so has part: feature:190692-190844:-1:exon
so has part: feature:190230-190304:-1:exon
so has part: feature:188501-188621:-1:exon
so has part: feature:187775-187913:-1:exon
so has part: feature:187135-187259:-1:exon
so has part: feature:186240-186795:-1:exon

XP_041089208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193631-193781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192996-193222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191927-192038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:190692-190844:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190230-190304:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188501-188621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187775-187913:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:187135-187259:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:186240-186795:-1:exon

zgc:112083
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: zgc:112083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zgc:112083 isoform X1
translation: MAKKSKPSELVVSCEWASCSFKGKSMEELCDHTALHLKEHLGDGEALEELDDYSCLWNGCEFIAIGSPRELVVHVNFHTFHAKLKCIGSQLLLSHPELRPCSQDLHSKNLVPELSGAFECQWEHCDSTFNNPEWFYRHVDMHAQCTEKEPLPNRQDALVCCWRGCDATFRIKYRLREHLRSHTQERVVACPTCGCMFASNTKFFDHIQRQCVSEESLVCEHCDKPFANERLLRDHVRQHVNHIKCPLCDMTCTTLASLRTHIKFRHCDERPFQCDFCESSFKNPHDLRKHTETHNEGAAYHCDVEGCTYSSRMAHSMSQHYKRVHEGDMVAKYKCHLCDKCFSWCYTLTLHLRKKHQLKWPSGHSRFRYKEDEDGYLRLNMVRYETVEVTEQIMKNMVRKRTPRKLWSSQPRRSGPAAGGESSQSSGMETEPQPVCCALSNVTQEQGQELHTHSMEPEPQPVCCALSNVTQEQGQELHTHSMEPEPQPVYCALSNVTQEQGQGLHTHSMEPEPQPVYCALSNVTQGQELHTHSSGAVEALTEVARGLGIQIV
SIO_010081: zgc:112083
subclass of: SO_0000673
so part of: zgc:112083
location: complement(join(186240..186795,187135..187259,187775..187913,188501..188621,190230..190304,190692..190844,191927..192038,192996..193222,193631..193781))
location: region:186240-193781:-1
so has part: feature:193631-193781:-1:exon
so has part: feature:192996-193222:-1:exon
so has part: feature:191927-192038:-1:exon
so has part: feature:190692-190844:-1:exon
so has part: feature:190230-190304:-1:exon
so has part: feature:188501-188621:-1:exon
so has part: feature:187775-187913:-1:exon
so has part: feature:187135-187259:-1:exon
so has part: feature:186240-186795:-1:exon

XP_041089209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193631-193781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192996-193222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191927-192038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:190692-190844:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190230-190304:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188501-188621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187775-187913:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:187135-187259:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:186240-186795:-1:exon

zgc:112083
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: zgc:112083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zgc:112083 isoform X1
translation: MAKKSKPSELVVSCEWASCSFKGKSMEELCDHTALHLKEHLGDGEALEELDDYSCLWNGCEFIAIGSPRELVVHVNFHTFHAKLKCIGSQLLLSHPELRPCSQDLHSKNLVPELSGAFECQWEHCDSTFNNPEWFYRHVDMHAQCTEKEPLPNRQDALVCCWRGCDATFRIKYRLREHLRSHTQERVVACPTCGCMFASNTKFFDHIQRQCVSEESLVCEHCDKPFANERLLRDHVRQHVNHIKCPLCDMTCTTLASLRTHIKFRHCDERPFQCDFCESSFKNPHDLRKHTETHNEGAAYHCDVEGCTYSSRMAHSMSQHYKRVHEGDMVAKYKCHLCDKCFSWCYTLTLHLRKKHQLKWPSGHSRFRYKEDEDGYLRLNMVRYETVEVTEQIMKNMVRKRTPRKLWSSQPRRSGPAAGGESSQSSGMETEPQPVCCALSNVTQEQGQELHTHSMEPEPQPVCCALSNVTQEQGQELHTHSMEPEPQPVYCALSNVTQEQGQGLHTHSMEPEPQPVYCALSNVTQGQELHTHSSGAVEALTEVARGLGIQIV
SIO_010081: zgc:112083
subclass of: SO_0000673
so part of: zgc:112083
location: complement(join(186240..186795,187135..187259,187775..187913,188501..188621,190230..190304,190692..190844,191927..192038,192996..193222,193631..193781))
location: region:186240-193781:-1
so has part: feature:193631-193781:-1:exon
so has part: feature:192996-193222:-1:exon
so has part: feature:191927-192038:-1:exon
so has part: feature:190692-190844:-1:exon
so has part: feature:190230-190304:-1:exon
so has part: feature:188501-188621:-1:exon
so has part: feature:187775-187913:-1:exon
so has part: feature:187135-187259:-1:exon
so has part: feature:186240-186795:-1:exon

XP_041089210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193631-193781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192996-193222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191927-192038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:190692-190844:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190230-190304:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188501-188621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187775-187913:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:187135-187259:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:186240-186795:-1:exon

prdm15
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: prdm15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(196569..222123)
location: region:196569-222123:-1
so has part: feature:196569-222123:-1:exon
subclass of: SO_0000010

121302803
type: Gene
SIO_000068: ncbigene

position:196569:-1
position: 196569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222123:-1
position: 222123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196569-222123:-1:exon

prdm15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: prdm15
product: PR domain containing 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_041233037.1
SIO_010081: prdm15
subclass of: SO_0000673
so part of: prdm15
location: complement(join(196569..197520,198232..198429,198965..199048,199471..199646,200276..200359,203930..204061,204751..204870,205041..205120,205554..205717,207205..207348,207675..207806,209604..209695,209851..210018,210217..210304,210700..210794,210952..211073,212450..212585,214315..214548,215137..215226,215436..215534,216523..216625,216866..217018,217775..217931,219307..219400,219734..219773,221986..222123))
location: region:196569-222123:-1
so has part: feature:221986-222123:-1:exon
so has part: feature:219734-219773:-1:exon
so has part: feature:219307-219400:-1:exon
so has part: feature:217775-217931:-1:exon
so has part: feature:216866-217018:-1:exon
so has part: feature:216523-216625:-1:exon
so has part: feature:215436-215534:-1:exon
so has part: feature:215137-215226:-1:exon
so has part: feature:214315-214548:-1:exon
so has part: feature:212450-212585:-1:exon
so has part: feature:210952-211073:-1:exon
so has part: feature:210700-210794:-1:exon
so has part: feature:210217-210304:-1:exon
so has part: feature:209851-210018:-1:exon
so has part: feature:209604-209695:-1:exon
so has part: feature:207675-207806:-1:exon
so has part: feature:207205-207348:-1:exon
so has part: feature:205554-205717:-1:exon
so has part: feature:205041-205120:-1:exon
so has part: feature:204751-204870:-1:exon
so has part: feature:203930-204061:-1:exon
so has part: feature:200276-200359:-1:exon
so has part: feature:199471-199646:-1:exon
so has part: feature:198965-199048:-1:exon
so has part: feature:198232-198429:-1:exon
so has part: feature:196569-197520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:221986-222123:-1:exon

position:221986:-1
position: 221986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:219734-219773:-1:exon

position:219734:-1
position: 219734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219773:-1
position: 219773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:219307-219400:-1:exon

position:219307:-1
position: 219307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219400:-1
position: 219400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:217775-217931:-1:exon

position:217775:-1
position: 217775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217931:-1
position: 217931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:216866-217018:-1:exon

position:216866:-1
position: 216866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217018:-1
position: 217018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:216523-216625:-1:exon

position:216523:-1
position: 216523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216625:-1
position: 216625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:215436-215534:-1:exon

position:215436:-1
position: 215436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215534:-1
position: 215534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:215137-215226:-1:exon

position:215137:-1
position: 215137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215226:-1
position: 215226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:214315-214548:-1:exon

position:214315:-1
position: 214315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214548:-1
position: 214548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:212450-212585:-1:exon

position:212450:-1
position: 212450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212585:-1
position: 212585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:210952-211073:-1:exon

position:210952:-1
position: 210952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211073:-1
position: 211073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:210700-210794:-1:exon

position:210700:-1
position: 210700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210794:-1
position: 210794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:210217-210304:-1:exon

position:210217:-1
position: 210217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210304:-1
position: 210304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:209851-210018:-1:exon

position:209851:-1
position: 209851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210018:-1
position: 210018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:209604-209695:-1:exon

position:209604:-1
position: 209604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209695:-1
position: 209695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:207675-207806:-1:exon

position:207675:-1
position: 207675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207806:-1
position: 207806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:207205-207348:-1:exon

position:207205:-1
position: 207205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207348:-1
position: 207348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:205554-205717:-1:exon

position:205554:-1
position: 205554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205717:-1
position: 205717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:205041-205120:-1:exon

position:205041:-1
position: 205041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205120:-1
position: 205120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:204751-204870:-1:exon

position:204751:-1
position: 204751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204870:-1
position: 204870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:203930-204061:-1:exon

position:203930:-1
position: 203930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204061:-1
position: 204061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:200276-200359:-1:exon

position:200276:-1
position: 200276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200359:-1
position: 200359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:199471-199646:-1:exon

position:199471:-1
position: 199471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199646:-1
position: 199646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:198965-199048:-1:exon

position:198965:-1
position: 198965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199048:-1
position: 199048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:198232-198429:-1:exon

position:198232:-1
position: 198232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198429:-1
position: 198429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:196569-197520:-1:exon

position:197520:-1
position: 197520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

prdm15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: prdm15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 15
translation: MAEGGPDEFIWCEDCGQYHNTECPELGPVVTVRDSFVLSRARSSLPDSLEIRRLADGAEGVFALVQLVKRTQFGPFEAKKVTGLDKEEVPFPLKVFQKDGLVVCFDYSNEDDCNWMGLVRPATDYKHQNLTAYQQDSEIYFNTSQDIQPGTELRVWYGAFYAKRMEKPVLKPVAIPPTDVVSTSLSKYEMMGENAVKNHGMGTPDSRVPTPAGQSSAAQAVECSQWACKVCSTVFVEPQLLTDHLLIHLEEVKGACQSVSVTPPPPPLEQEPEVVPPDPAVTPHVVTPPPDPKRKPGRARKPKVPKTDPIQVLGEQIDSTADAVPAVGEVITAGAPEPQQQDLTAAAQPVPGKLQRMSRTMLPAGKSGVRKRFMRSAGEHKRVYQCNLCNKVFQNSSNLNRHLRSHGDKLFKCDECEKLFSRKESLKQHISYKHSKNEIDMEYRYRCPTCEKAFRMESALKFHNCRTDDKTFQCEICSRFFSTNSNLSKHKKKHGEKMYTCEICNKMFYRKDVMQDHQRRHIVGPKHMKREDLANGEEGTKYRKEPSACPICGKVFSCRSNMNKHLLTHGDKKYTCEICGRKFYRVDVLRDHIHVHFKDIALMDEHQREEFIGKIGISLEDEDGDSEEEDGEDDMELHKYSCKKCQVSFAKGRDYLRHIMELHKEKGYGCNICNRRFALKATYNAHMVIHRENLPDPNVQRYIHPCEICGRIFNSIGNLERHKIIHTGVKSHGCERCGKSFARKDMLKEHLRVHDNIRDYLCAECGKGMKTKHALRHHMKLHKGIKEYECKECSRKFAQKVNMLKHYKRHTGIKDFMCELCGKTFSERNTMETHKLIHTVGKTWTCSVCDKKYVTEYMLQKHIQLTHEKVEAQSCHLCGTKVSTRASMNRHMRRKHPEIISVRIDDFEDELHEGSTIDASTISIVQPQLALDEADLPGEKQTRTPRPAKKKQKSSARGEREQPAYSEYTDKEVEFTGSLGDETSSAVQSIQQVVVTLADPSVTAAPSSSMGLTSISVTPITTPAGGQFTSLQPVAVSHLSPGDPQLALDSSILTVTFDAVSGSATLLNRPADLQLPSVQEPGAQAQSVAHFINLATFVNPITNPALTWRPLTPSEGSPTDGLQPQQQGDGEEGQQAEQEVQEQGQEQGEQGEQQQMYGY
SIO_010081: prdm15
subclass of: SO_0000673
so part of: prdm15
location: complement(join(197017..197520,198232..198429,198965..199048,199471..199646,200276..200359,203930..204061,204751..204870,205041..205120,205554..205717,207205..207348,207675..207806,209604..209695,209851..210018,210217..210304,210700..210794,210952..211073,212450..212585,214315..214548,215137..215226,215436..215534,216523..216625,216866..217018,217775..217931,219307..219400,219734..219764))
location: region:197017-219764:-1
so has part: feature:219734-219764:-1:exon
so has part: feature:219307-219400:-1:exon
so has part: feature:217775-217931:-1:exon
so has part: feature:216866-217018:-1:exon
so has part: feature:216523-216625:-1:exon
so has part: feature:215436-215534:-1:exon
so has part: feature:215137-215226:-1:exon
so has part: feature:214315-214548:-1:exon
so has part: feature:212450-212585:-1:exon
so has part: feature:210952-211073:-1:exon
so has part: feature:210700-210794:-1:exon
so has part: feature:210217-210304:-1:exon
so has part: feature:209851-210018:-1:exon
so has part: feature:209604-209695:-1:exon
so has part: feature:207675-207806:-1:exon
so has part: feature:207205-207348:-1:exon
so has part: feature:205554-205717:-1:exon
so has part: feature:205041-205120:-1:exon
so has part: feature:204751-204870:-1:exon
so has part: feature:203930-204061:-1:exon
so has part: feature:200276-200359:-1:exon
so has part: feature:199471-199646:-1:exon
so has part: feature:198965-199048:-1:exon
so has part: feature:198232-198429:-1:exon
so has part: feature:197017-197520:-1:exon

XP_041088971.1
type: Protein
SIO_000068: ncbiprotein

position:197017:-1
position: 197017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219764:-1
position: 219764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219734-219764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219307-219400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217775-217931:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216866-217018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216523-216625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215436-215534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215137-215226:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:214315-214548:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212450-212585:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:210952-211073:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:210700-210794:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:210217-210304:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:209851-210018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:209604-209695:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:207675-207806:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:207205-207348:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:205554-205717:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:205041-205120:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:204751-204870:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:203930-204061:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:200276-200359:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:199471-199646:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:198965-199048:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:198232-198429:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:197017-197520:-1:exon

LOC121302812
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302812
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(226768..251175)
location: region:226768-251175:-1
so has part: feature:226768-251175:-1:exon
subclass of: SO_0000010

121302812
type: Gene
SIO_000068: ncbigene

position:226768:-1
position: 226768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251175:-1
position: 251175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226768-251175:-1:exon

LOC121302812
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302812
product: C2 domain-containing protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041233047.1
SIO_010081: LOC121302812
subclass of: SO_0000673
so part of: LOC121302812
location: complement(join(226768..228110,230747..231005,231405..231532,233026..233136,233514..233679,234727..234842,236228..236292,237214..237322,239909..240013,241554..241671,242546..242650,243866..243988,246956..247051,249365..251175))
location: region:226768-251175:-1
so has part: feature:249365-251175:-1:exon
so has part: feature:246956-247051:-1:exon
so has part: feature:243866-243988:-1:exon
so has part: feature:242546-242650:-1:exon
so has part: feature:241554-241671:-1:exon
so has part: feature:239909-240013:-1:exon
so has part: feature:237214-237322:-1:exon
so has part: feature:236228-236292:-1:exon
so has part: feature:234727-234842:-1:exon
so has part: feature:233514-233679:-1:exon
so has part: feature:233026-233136:-1:exon
so has part: feature:231405-231532:-1:exon
so has part: feature:230747-231005:-1:exon
so has part: feature:226768-228110:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:249365-251175:-1:exon

position:249365:-1
position: 249365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:246956-247051:-1:exon

position:246956:-1
position: 246956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247051:-1
position: 247051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:243866-243988:-1:exon

position:243866:-1
position: 243866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243988:-1
position: 243988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:242546-242650:-1:exon

position:242546:-1
position: 242546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242650:-1
position: 242650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:241554-241671:-1:exon

position:241554:-1
position: 241554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241671:-1
position: 241671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:239909-240013:-1:exon

position:239909:-1
position: 239909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240013:-1
position: 240013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:237214-237322:-1:exon

position:237214:-1
position: 237214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237322:-1
position: 237322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:236228-236292:-1:exon

position:236228:-1
position: 236228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236292:-1
position: 236292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:234727-234842:-1:exon

position:234727:-1
position: 234727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234842:-1
position: 234842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:233514-233679:-1:exon

position:233514:-1
position: 233514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233679:-1
position: 233679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:233026-233136:-1:exon

position:233026:-1
position: 233026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233136:-1
position: 233136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:231405-231532:-1:exon

position:231405:-1
position: 231405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231532:-1
position: 231532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:230747-231005:-1:exon

position:230747:-1
position: 230747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231005:-1
position: 231005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:226768-228110:-1:exon

position:228110:-1
position: 228110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121302812
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302812
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C2 domain-containing protein 2
translation: MSLLESVLACLTPGDVDMQWFCLATLFAASVVTVLLYLVQYSVGIFRVRTASRSCGAFPESEEAGRLLSWALSLKNWKSQWQEAWITSISKEAKRIGGPLQLTFQECGHQPAELTITQVSSVRKADQDKIVCCQVVGERVQFSLGVTRRTATAAGLQKTYSIQISPFKLQLELRLHEAEQDIQVSWSLSRLEDWNLQIAPRNREELAEGNPDITALRNTLKDIVCSARPSVRLSSKPADGKEAKGFRNVGSSSQVSCAHEWKLLLKNIKAMYNTGGDAAGSIHPYFAIQLDDPPQQLSSPVIKNTTTPSWDQPVTLELSAKSKELKIQLLDEGKPQKSATLGLVSVPLDLFKRHPSGVHTFALSSTDAARGSISAEFTYLEPSELRSWQAPIPAPTKKVEMDRTVMPCGTVVTTVTAVKSKPGRSPSGVSADYPMKITSRLKLSERSVSDQTGPSAATVSKALSSSDTELLMLNGTDPVAEAAIRQLHESAKQHLKSPVKKSTIIISGVAKSPISQDDETALMMGYAAAMDASMTQEPLCAAPEAPPLELELPKPQEGPSGSRARGGELSAVQDPDTETKSQLSLSVSESGSVKKSKSGFLHRSARLFFRRRHHRKDPGLSQSHNDLMYLEQPVAVEKERKSATISRIINRKLLPRNKSKSKVNGAMGDPSA
SIO_010081: LOC121302812
subclass of: SO_0000673
so part of: LOC121302812
location: complement(join(227884..228110,230747..231005,231405..231532,233026..233136,233514..233679,234727..234842,236228..236292,237214..237322,239909..240013,241554..241671,242546..242650,243866..243988,246956..247051,249365..249655))
location: region:227884-249655:-1
so has part: feature:249365-249655:-1:exon
so has part: feature:246956-247051:-1:exon
so has part: feature:243866-243988:-1:exon
so has part: feature:242546-242650:-1:exon
so has part: feature:241554-241671:-1:exon
so has part: feature:239909-240013:-1:exon
so has part: feature:237214-237322:-1:exon
so has part: feature:236228-236292:-1:exon
so has part: feature:234727-234842:-1:exon
so has part: feature:233514-233679:-1:exon
so has part: feature:233026-233136:-1:exon
so has part: feature:231405-231532:-1:exon
so has part: feature:230747-231005:-1:exon
so has part: feature:227884-228110:-1:exon

XP_041088981.1
type: Protein
SIO_000068: ncbiprotein

position:227884:-1
position: 227884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249655:-1
position: 249655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249365-249655:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:246956-247051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243866-243988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242546-242650:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:241554-241671:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:239909-240013:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:237214-237322:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:236228-236292:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234727-234842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:233514-233679:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:233026-233136:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:231405-231532:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230747-231005:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:227884-228110:-1:exon

atg101
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: atg101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 251448..255424
location: region:251448-255424:1
so has part: feature:251448-255424:1:exon
subclass of: SO_0000010

121302811
type: Gene
SIO_000068: ncbigene

position:251448:1
position: 251448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255424:1
position: 255424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251448-255424:1:exon

atg101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: atg101
product: autophagy related 101
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041233046.1
SIO_010081: atg101
subclass of: SO_0000673
so part of: atg101
location: join(251448..251955,254047..255424)
location: region:251448-255424:1
so has part: feature:251448-251955:1:exon
so has part: feature:254047-255424:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:251448-251955:1:exon

position:251955:1
position: 251955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:254047-255424:1:exon

position:254047:1
position: 254047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

atg101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: atg101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy-related protein 101
translation: MNCRSEVLEVSLESRQVDEAMLALLHTILLHRSTGKFHYKKEGTYSIGTVGSQDTDCDYIDFSFVRVSSEELDRAMRKSVGEFKDALCNSGSDGVGQISLEFYQKKKSRWPFSDECIPWEVWSIKVNVVSLANEQERQICREKVGEKLGEKVINIVEVINRHEYLPKMPTQSEVDNVFDTSLKDVQPYLYKITYQITDSLGTSVSTTMRRLIKDTLAL
SIO_010081: atg101
subclass of: SO_0000673
so part of: atg101
location: join(251704..251955,254047..254451)
location: region:251704-254451:1
so has part: feature:251704-251955:1:exon
so has part: feature:254047-254451:1:exon

XP_041088980.1
type: Protein
SIO_000068: ncbiprotein

position:251704:1
position: 251704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254451:1
position: 254451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251704-251955:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254047-254451:1:exon

zbtb21
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: zbtb21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(260272..271355)
location: region:260272-271355:-1
so has part: feature:260272-271355:-1:exon
subclass of: SO_0000010

121302704
type: Gene
SIO_000068: ncbigene

position:260272:-1
position: 260272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271355:-1
position: 271355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260272-271355:-1:exon

zbtb21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: zbtb21
product: zinc finger and BTB domain containing 21, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_041232794.1
SIO_010081: zbtb21
subclass of: SO_0000673
so part of: zbtb21
location: complement(join(260272..266983,271131..271355))
location: region:260272-271355:-1
so has part: feature:271131-271355:-1:exon
so has part: feature:260272-266983:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271131-271355:-1:exon

position:271131:-1
position: 271131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:260272-266983:-1:exon

position:266983:-1
position: 266983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

zbtb21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: zbtb21
product: zinc finger and BTB domain containing 21, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_041232793.1
SIO_010081: zbtb21
subclass of: SO_0000673
so part of: zbtb21
location: complement(join(260272..266983,271231..271354))
location: region:260272-271354:-1
so has part: feature:271231-271354:-1:exon
so has part: feature:260272-266983:-1:exon

position:271354:-1
position: 271354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271231-271354:-1:exon

position:271231:-1
position: 271231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:260272-266983:-1:exon

zbtb21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: zbtb21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 21
translation: MEGLTHYINPAHAVSLLSSLNEQRLKGKLCDVLLIVGDHKFRAHKSVLAGSSEYFHSLFASGDGETRSVVQLDFCEPDVFEDVLNYIYSSSIVVEKDCLAAVQELGYSLGISFLTNILSKKPQALYTGSRRRTPFSEEDESGLQKRTVIVCQGRSDKPRTSSAQGKQPSPTPLADLKQFSTIKSNKTSTSQNVSESGQAWAKDSGASSGNDKESETPASVSPVRKSAGVIESLVRKTSPATVVQMGKSIEMSPTRPQLSTSLSFNDSKALQERVQPNSTGHRDHRTLAHHSSVGPHASPGRPEPDRQRIDRSGPLIKSLLRRSLSMDSPVPFYSPAFELKSMQAPEETVLRPGPEKSAEHKRVKETPKVIQPPHRRPGVFSKPSETEVHVKTEPSSPLVDPPEIIRVTVGDGLPVNLRDLQMNTEHLRNVTKHSFKRKSRPDCKRTPSKKSKYVIDDGDFGMEQTRRATAPHDSDAEGDPELNETRQSRIFKCWSCLKIFRSNTGLYRHVNMYHNPEKPYSCDICHKRFHTNFKVWTHCQTQHGVVKNPAPASSSYSVLDEKFQRKLIDIVREREIKKALLAKLRRNKQGLGGSQAQHFPKRGLRSKPKTYFCTYCGKVFRFHSQFKQHIKMHPGEKPATEVDEEREGGGGGDHLSKLQEPPGCPSPGKAQELYPCKLCNAKLPSPVEQGNHERLCRHATVCPYCNLRFTTPELKREHEGQCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNTMTPKERLSLSPADLNGETPEEAARPEPELAEARGSCDSSTVSKNDPVLSDYSEQMLFEDSDESLNAPEDLSVSRKLDLKIKEEPAEEAEEVVEDDEVSEPGVELKDSAAGMEVNVWTCEKCGKIFAVRNQLERHQELLCHIKPFVCHICNKAFRTNFRLWSHFQSHMASSEESSSKEADPPHPSSASPSPPPPTPAPPQPLSPPSRVKRPETERARRASFSSFSTPKPSDPDKSITPQESDTLFYHAPPLSAITFKRQFMCKLCHRTFKTAFSLWSHEQSHTNV
SIO_010081: zbtb21
subclass of: SO_0000673
so part of: zbtb21
location: complement(263857..266973)
location: region:263857-266973:-1
so has part: feature:263857-266973:-1:exon

XP_041088727.1
type: Protein
SIO_000068: ncbiprotein

position:263857:-1
position: 263857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266973:-1
position: 266973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263857-266973:-1:exon

zbtb21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: zbtb21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 21
translation: MEGLTHYINPAHAVSLLSSLNEQRLKGKLCDVLLIVGDHKFRAHKSVLAGSSEYFHSLFASGDGETRSVVQLDFCEPDVFEDVLNYIYSSSIVVEKDCLAAVQELGYSLGISFLTNILSKKPQALYTGSRRRTPFSEEDESGLQKRTVIVCQGRSDKPRTSSAQGKQPSPTPLADLKQFSTIKSNKTSTSQNVSESGQAWAKDSGASSGNDKESETPASVSPVRKSAGVIESLVRKTSPATVVQMGKSIEMSPTRPQLSTSLSFNDSKALQERVQPNSTGHRDHRTLAHHSSVGPHASPGRPEPDRQRIDRSGPLIKSLLRRSLSMDSPVPFYSPAFELKSMQAPEETVLRPGPEKSAEHKRVKETPKVIQPPHRRPGVFSKPSETEVHVKTEPSSPLVDPPEIIRVTVGDGLPVNLRDLQMNTEHLRNVTKHSFKRKSRPDCKRTPSKKSKYVIDDGDFGMEQTRRATAPHDSDAEGDPELNETRQSRIFKCWSCLKIFRSNTGLYRHVNMYHNPEKPYSCDICHKRFHTNFKVWTHCQTQHGVVKNPAPASSSYSVLDEKFQRKLIDIVREREIKKALLAKLRRNKQGLGGSQAQHFPKRGLRSKPKTYFCTYCGKVFRFHSQFKQHIKMHPGEKPATEVDEEREGGGGGDHLSKLQEPPGCPSPGKAQELYPCKLCNAKLPSPVEQGNHERLCRHATVCPYCNLRFTTPELKREHEGQCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNTMTPKERLSLSPADLNGETPEEAARPEPELAEARGSCDSSTVSKNDPVLSDYSEQMLFEDSDESLNAPEDLSVSRKLDLKIKEEPAEEAEEVVEDDEVSEPGVELKDSAAGMEVNVWTCEKCGKIFAVRNQLERHQELLCHIKPFVCHICNKAFRTNFRLWSHFQSHMASSEESSSKEADPPHPSSASPSPPPPTPAPPQPLSPPSRVKRPETERARRASFSSFSTPKPSDPDKSITPQESDTLFYHAPPLSAITFKRQFMCKLCHRTFKTAFSLWSHEQSHTNV
SIO_010081: zbtb21
subclass of: SO_0000673
so part of: zbtb21
location: complement(263857..266973)
location: region:263857-266973:-1
so has part: feature:263857-266973:-1:exon

XP_041088728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263857-266973:-1:exon

umodl1
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: umodl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 273489..294954
location: region:273489-294954:1
so has part: feature:273489-294954:1:exon
subclass of: SO_0000010

121302569
type: Gene
SIO_000068: ncbigene

position:273489:1
position: 273489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294954:1
position: 294954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273489-294954:1:exon

umodl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: umodl1
product: uromodulin-like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041232571.1
SIO_010081: umodl1
subclass of: SO_0000673
so part of: umodl1
location: join(273489..274537,275860..276102,276877..277038,277880..277992,278470..278603,279107..279183,279273..279380,280137..280781,281266..281523,281649..281761,282516..282735,283229..283366,284454..284591,286876..287549,290327..290472,290840..291076,291371..291530,291863..291947,293835..294954)
location: region:273489-294954:1
so has part: feature:273489-274537:1:exon
so has part: feature:275860-276102:1:exon
so has part: feature:276877-277038:1:exon
so has part: feature:277880-277992:1:exon
so has part: feature:278470-278603:1:exon
so has part: feature:279107-279183:1:exon
so has part: feature:279273-279380:1:exon
so has part: feature:280137-280781:1:exon
so has part: feature:281266-281523:1:exon
so has part: feature:281649-281761:1:exon
so has part: feature:282516-282735:1:exon
so has part: feature:283229-283366:1:exon
so has part: feature:284454-284591:1:exon
so has part: feature:286876-287549:1:exon
so has part: feature:290327-290472:1:exon
so has part: feature:290840-291076:1:exon
so has part: feature:291371-291530:1:exon
so has part: feature:291863-291947:1:exon
so has part: feature:293835-294954:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273489-274537:1:exon

position:274537:1
position: 274537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:275860-276102:1:exon

position:275860:1
position: 275860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276102:1
position: 276102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:276877-277038:1:exon

position:276877:1
position: 276877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277038:1
position: 277038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:277880-277992:1:exon

position:277880:1
position: 277880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277992:1
position: 277992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:278470-278603:1:exon

position:278470:1
position: 278470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278603:1
position: 278603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:279107-279183:1:exon

position:279107:1
position: 279107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279183:1
position: 279183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:279273-279380:1:exon

position:279273:1
position: 279273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279380:1
position: 279380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:280137-280781:1:exon

position:280137:1
position: 280137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280781:1
position: 280781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:281266-281523:1:exon

position:281266:1
position: 281266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281523:1
position: 281523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:281649-281761:1:exon

position:281649:1
position: 281649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281761:1
position: 281761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:282516-282735:1:exon

position:282516:1
position: 282516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282735:1
position: 282735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:283229-283366:1:exon

position:283229:1
position: 283229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283366:1
position: 283366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:284454-284591:1:exon

position:284454:1
position: 284454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284591:1
position: 284591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:286876-287549:1:exon

position:286876:1
position: 286876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287549:1
position: 287549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:290327-290472:1:exon

position:290327:1
position: 290327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290472:1
position: 290472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:290840-291076:1:exon

position:290840:1
position: 290840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291076:1
position: 291076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:291371-291530:1:exon

position:291371:1
position: 291371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291530:1
position: 291530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:291863-291947:1:exon

position:291863:1
position: 291863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291947:1
position: 291947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:293835-294954:1:exon

position:293835:1
position: 293835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

umodl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: umodl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uromodulin-like 1
translation: MSWISRIALILLFTGETRGHNTLFTGYDLSLTGYHLCPQTVTKTVSKVVAYQTSHTERSSCGGWLPWKNCLKTQYRTAYRIVETKIMKHSPACCEGYEQVGSYCALPLNRAEEFTSKPGTCPEHQVALSNQSCAWDIHCPGLQKCCRVNGMALCVSPVCAVAEGHWFYNATVTVKMNFAELDSLDKGLLNHSRLLHSVENISSELELIVRNIEEVCHVEVQGEQFHLDSSVQIKTSLLNWSSSTNKNISSELELIVRNIEEVCHVEVQDVDQCSLCFSAEGSYDCSCGPGFINTTLDRNGTECTADLNTGTGSSNSSTLQENTTAPASWTQRNTTGVPDFHVVIEGSTTTHSPPTRAMEPFGTTTGLPPITSTITTQRQNNVTADLTDTAATSQLNSTVSTHNIAEEGITSTVQPVSCALGGALCNAFSTISMMPGDWMRNSTATPSPTVATSPHLMQSTATGLDSTNSTVLNFTKVSTDSPHTNPSWITTALPATTSSPDLSTWSSSIPLPLATTIACYPSPVKNLVVLNVTSLGFYVSWSVDDSHFNASFQVKLLQGAVELQSVETREPGWAVAGLVAGQLYTVWVVVKLCGRESVTLQEVRTAAEVLEGTARITNLQFTEALSNSSSAEYLNLTQEIQMEILKSLPEDTLALLSSGEVRLVITSVSSGSVKVHFMVVFTAALHNRIQNVSSALLTSLQSSSLYAIDSNSTSIKDFDECSAGEDDCSPHASCVNTWGSYSCHCRDTFTDINPSRPGRSCHDIDECESGNTTCNMNASCQNTIGGYSCSCHNGFRDTDPRNPGRHCAVLESGSTPAPSSSLSETPALKETLDTQGSTTVMPLSVTPALKETRDTQGSTTVMPLSETPALKETRDTQGSTTVMPLSETPALKETLDTQGSTTVMPLSETPALKETRDTQGSTTVMPLSETPALKETLDTQGSTTVMPLSETPALKETRDTQGSTTVIPLTEAITVSCRVPHITVSVKKAFLAWKSIAESSLYLGTEECNASSSNETHVWLSAVWGKCATQLLHNTSHMTVQTTLFNTHASNITLLPETVIKLPVRCTYSNDFLISTGYTPSEIENLKGVIEGAGSFLATIQLLNGTVPLPKNYSLSPNDDVLIEVGVNLDSLQVKIILHECWATPSISSTDPTTHMFMRNSCPVPDTYTTVLENGNSTRARVSLRVFSFVDQSVIYLHCRVRVCLESAGTSCKPNCNLRSSGSSAQIEIGQAMWGPIYKSSTETAQNPSNPYNEMGFILLGVFLCVLLVVVVAVLMSQYRKRVGHYNFSIKPSQENFTYQVFDT
SIO_010081: umodl1
subclass of: SO_0000673
so part of: umodl1
location: join(274462..274537,275860..276102,276877..277038,277880..277992,278470..278603,279107..279183,279273..279380,280137..280781,281266..281523,281649..281761,282516..282735,283229..283366,284454..284591,286876..287549,290327..290472,290840..291076,291371..291530,291863..291947,293835..294022)
location: region:274462-294022:1
so has part: feature:274462-274537:1:exon
so has part: feature:275860-276102:1:exon
so has part: feature:276877-277038:1:exon
so has part: feature:277880-277992:1:exon
so has part: feature:278470-278603:1:exon
so has part: feature:279107-279183:1:exon
so has part: feature:279273-279380:1:exon
so has part: feature:280137-280781:1:exon
so has part: feature:281266-281523:1:exon
so has part: feature:281649-281761:1:exon
so has part: feature:282516-282735:1:exon
so has part: feature:283229-283366:1:exon
so has part: feature:284454-284591:1:exon
so has part: feature:286876-287549:1:exon
so has part: feature:290327-290472:1:exon
so has part: feature:290840-291076:1:exon
so has part: feature:291371-291530:1:exon
so has part: feature:291863-291947:1:exon
so has part: feature:293835-294022:1:exon

XP_041088505.1
type: Protein
SIO_000068: ncbiprotein

position:274462:1
position: 274462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294022:1
position: 294022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274462-274537:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275860-276102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276877-277038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277880-277992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:278470-278603:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279107-279183:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279273-279380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280137-280781:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:281266-281523:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281649-281761:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:282516-282735:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:283229-283366:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:284454-284591:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:286876-287549:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:290327-290472:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:290840-291076:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:291371-291530:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291863-291947:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:293835-294022:1:exon

uvrag
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: uvrag
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 295925..344602
location: region:295925-344602:1
so has part: feature:295925-344602:1:exon
subclass of: SO_0000010

121302570
type: Gene
SIO_000068: ncbigene

position:295925:1
position: 295925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344602:1
position: 344602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295925-344602:1:exon

uvrag
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: uvrag
product: UV radiation resistance associated gene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041232572.1
SIO_010081: uvrag
subclass of: SO_0000673
so part of: uvrag
location: join(295925..295966,296130..296520,297156..297190,299669..299830,300340..300414,300865..300947,307957..308062,311952..312078,319876..319960,322998..323085,323288..323348,328670..328835,343355..344602)
location: region:295925-344602:1
so has part: feature:295925-295966:1:exon
so has part: feature:296130-296520:1:exon
so has part: feature:297156-297190:1:exon
so has part: feature:299669-299830:1:exon
so has part: feature:300340-300414:1:exon
so has part: feature:300865-300947:1:exon
so has part: feature:307957-308062:1:exon
so has part: feature:311952-312078:1:exon
so has part: feature:319876-319960:1:exon
so has part: feature:322998-323085:1:exon
so has part: feature:323288-323348:1:exon
so has part: feature:328670-328835:1:exon
so has part: feature:343355-344602:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295925-295966:1:exon

position:295966:1
position: 295966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:296130-296520:1:exon

position:296130:1
position: 296130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296520:1
position: 296520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:297156-297190:1:exon

position:297156:1
position: 297156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297190:1
position: 297190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:299669-299830:1:exon

position:299669:1
position: 299669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299830:1
position: 299830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:300340-300414:1:exon

position:300340:1
position: 300340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300414:1
position: 300414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:300865-300947:1:exon

position:300865:1
position: 300865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300947:1
position: 300947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:307957-308062:1:exon

position:307957:1
position: 307957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308062:1
position: 308062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:311952-312078:1:exon

position:311952:1
position: 311952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312078:1
position: 312078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:319876-319960:1:exon

position:319876:1
position: 319876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319960:1
position: 319960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:322998-323085:1:exon

position:322998:1
position: 322998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323085:1
position: 323085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:323288-323348:1:exon

position:323288:1
position: 323288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323348:1
position: 323348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:328670-328835:1:exon

position:328670:1
position: 328670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328835:1
position: 328835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:343355-344602:1:exon

position:343355:1
position: 343355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

uvrag
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: uvrag
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UV radiation resistance-associated gene protein
translation: MVCRAKGGKRFPVLLCNKPQLYHYLHPPFFFSRVVLLDFQLGNLPSSYALTSAACETDCLTEVGFGFQNRTNPRPSSPISLSACRSVLQVDDFFKCFFCVCFVAQRRLRHLRSIAARNIVNRNGSPLLDTLFTLHLCAGSRIFRAFYKSEVVRDSLNPTWRSVDFAELPEELDMSVSCFVVRIWGGRLEQYQLLIEWKVNLDGLRYTGQQIRSRNPNEIIFGLNDGYYGASFYHRDPSEGKSSLLQVDQSSVRNSYSVFSLLRLHTAQRAIKQTQATVQKIGTEIEEKLRLTASSNELKKERECIQLKILVLRSELERQKRALGRELETLQKEQTLLQRKGEAFSNKQQSLETDQESLTEQQKECTAKRELFLKSNAQLAFRCRQLLSELSYIYPIEVSNQTDYVICGVKLPNSEDFQARDDGSVAVALGYTAHIVLMVSCFLQVPLRYPVVHKGSRSSIKDNITDQLSEKERECKTSAPKINICILNYSVLQSLQSACYATTVLHMFYFITFILFFLFFLFPPSDRHQMSSAIPVPLKSRMSTSEMGYPTRTTSPERGLRKRAVSETDQPQYRTPPPSYNTATTQPIALLAPPRGSSAAKPMSSSLDAAIDFSKSMEAGKALNDSGGGVSDSMRDTSDQLDSSPQRSGTLNGSAVPSEDNSLTFSGELRCSVEQAEEIMGTEATGYSVGGEHSLEGFTCIPVDHAVAVECDEQVLGELDVTGFEEFSRRIYALNENMSSFRRPRKNLEK
SIO_010081: uvrag
subclass of: SO_0000673
so part of: uvrag
location: join(295925..295966,296130..296520,297156..297190,299669..299830,300340..300414,300865..300947,307957..308062,311952..312078,319876..319960,322998..323085,323288..323348,328670..328835,343355..344186)
location: region:295925-344186:1
so has part: feature:295925-295966:1:exon
so has part: feature:296130-296520:1:exon
so has part: feature:297156-297190:1:exon
so has part: feature:299669-299830:1:exon
so has part: feature:300340-300414:1:exon
so has part: feature:300865-300947:1:exon
so has part: feature:307957-308062:1:exon
so has part: feature:311952-312078:1:exon
so has part: feature:319876-319960:1:exon
so has part: feature:322998-323085:1:exon
so has part: feature:323288-323348:1:exon
so has part: feature:328670-328835:1:exon
so has part: feature:343355-344186:1:exon

XP_041088506.1
type: Protein
SIO_000068: ncbiprotein

position:344186:1
position: 344186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295925-295966:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:296130-296520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297156-297190:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299669-299830:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300340-300414:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300865-300947:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307957-308062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:311952-312078:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:319876-319960:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:322998-323085:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:323288-323348:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:328670-328835:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343355-344186:1:exon

LOC121302622
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302622
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(424352..429731)
location: region:424352-429731:-1
so has part: feature:424352-429731:-1:exon
subclass of: SO_0000010

121302622
type: Gene
SIO_000068: ncbigene

position:424352:-1
position: 424352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429731:-1
position: 429731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424352-429731:-1:exon

LOC121302622
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302622
product: 52 kDa repressor of the inhibitor of the protein kinase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041232627.1
SIO_010081: LOC121302622
subclass of: SO_0000673
so part of: LOC121302622
location: complement(join(424352..426385,426521..426554,426977..427084,427824..427944,429218..429731))
location: region:424352-429731:-1
so has part: feature:429218-429731:-1:exon
so has part: feature:427824-427944:-1:exon
so has part: feature:426977-427084:-1:exon
so has part: feature:426521-426554:-1:exon
so has part: feature:424352-426385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:429218-429731:-1:exon

position:429218:-1
position: 429218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:427824-427944:-1:exon

position:427824:-1
position: 427824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427944:-1
position: 427944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:426977-427084:-1:exon

position:426977:-1
position: 426977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427084:-1
position: 427084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:426521-426554:-1:exon

position:426521:-1
position: 426521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426554:-1
position: 426554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:424352-426385:-1:exon

position:426385:-1
position: 426385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121302622
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302622
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 52 kDa repressor of the inhibitor of the protein kinase-like
translation: MPNFCAAPNCTRKSTQSDLAFFRFPRDPRRCSLWVENCRREDLEDKTPDQLNKHYRLCAKHFEPSMICKTSPYRTVLKDNAVPTVFDLTSHLNNPHSRHRKRIKVLSDEELRKMTARIENCGEQEQLKNDTQNEAQFEEIEEDHPPITPQEKEVKDYLKSLFDILVLMGKQNIPLNGHGEEGVEESGAFTPSNFQSLLESRITAGDEVLRRRFEMTAVNVEYCPVTQQRQMLEVCESCLREELLREVRESRFFSLVTDEAVEISGEDHLPVFLRFVDESNNLREEFAGFLPCEEDEDAVFVSLHTEITEKWGLNLEYCRGQSHVNSGDYALKLKAVASKLTEKYPLAVCTPCSTCALNIWLAKALPLAGVQMVLGTLKIISSFFSKSPQLLSELENAIATIHQANEERADELREICRTQWIERHDAFEVAVDLLEPLLLCMDSVNGNANFSRHVAFEAYSISVNLEEFEFVVTLVVLKNALSFTRAFGKNLQGNTLDVFFAASSLTAVLHSLNEVMENIEVYHEFWFEEATNLAAKMEIPVKLPRLYLRQHRPEPGFELLPESYYKESLSIPLVSRVIQELKEIFSETHLKALKCLSLVPSVMGQMKFNTSEESNADLYRNDLPNPDTLPAELHCWRIKWKHRGKDVDLPSTIYQTLQLSEVKFFPNVYSFLRVLCTLPVIKVESSKYDCGRKRLRAYLSDTPANHRSKSLALLNINYEVRHDLDLMVDTYSKMYPEKADEQ
SIO_010081: LOC121302622
subclass of: SO_0000673
so part of: LOC121302622
location: complement(join(424509..426385,426521..426554,426977..427084,427824..427944,429218..429306))
location: region:424509-429306:-1
so has part: feature:429218-429306:-1:exon
so has part: feature:427824-427944:-1:exon
so has part: feature:426977-427084:-1:exon
so has part: feature:426521-426554:-1:exon
so has part: feature:424509-426385:-1:exon

XP_041088561.1
type: Protein
SIO_000068: ncbiprotein

position:424509:-1
position: 424509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429306:-1
position: 429306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429218-429306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:427824-427944:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:426977-427084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426521-426554:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424509-426385:-1:exon

emsy
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: emsy
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 429902..447813
location: region:429902-447813:1
so has part: feature:429902-447813:1:exon
subclass of: SO_0000010

121302621
type: Gene
SIO_000068: ncbigene

position:429902:1
position: 429902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447813:1
position: 447813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429902-447813:1:exon

emsy
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: emsy
product: EMSY transcriptional repressor, BRCA2 interacting, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041232625.1
SIO_010081: emsy
subclass of: SO_0000673
so part of: emsy
location: join(429902..430296,431524..431632,432242..432341,432925..432999,433505..433680,434341..434493,434929..435188,435959..436226,436805..437053,437495..437647,437847..438020,438672..438808,439514..439609,440519..440686,441418..441613,442034..442042,442395..442559,442862..443017,443863..444059,444725..445216,445424..445870,446438..447813)
location: region:429902-447813:1
so has part: feature:429902-430296:1:exon
so has part: feature:431524-431632:1:exon
so has part: feature:432242-432341:1:exon
so has part: feature:432925-432999:1:exon
so has part: feature:433505-433680:1:exon
so has part: feature:434341-434493:1:exon
so has part: feature:434929-435188:1:exon
so has part: feature:435959-436226:1:exon
so has part: feature:436805-437053:1:exon
so has part: feature:437495-437647:1:exon
so has part: feature:437847-438020:1:exon
so has part: feature:438672-438808:1:exon
so has part: feature:439514-439609:1:exon
so has part: feature:440519-440686:1:exon
so has part: feature:441418-441613:1:exon
so has part: feature:442034-442042:1:exon
so has part: feature:442395-442559:1:exon
so has part: feature:442862-443017:1:exon
so has part: feature:443863-444059:1:exon
so has part: feature:444725-445216:1:exon
so has part: feature:445424-445870:1:exon
so has part: feature:446438-447813:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:429902-430296:1:exon

position:430296:1
position: 430296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:431524-431632:1:exon

position:431524:1
position: 431524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431632:1
position: 431632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:432242-432341:1:exon

position:432242:1
position: 432242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432341:1
position: 432341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:432925-432999:1:exon

position:432925:1
position: 432925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432999:1
position: 432999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:433505-433680:1:exon

position:433505:1
position: 433505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433680:1
position: 433680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:434341-434493:1:exon

position:434341:1
position: 434341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434493:1
position: 434493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:434929-435188:1:exon

position:434929:1
position: 434929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435188:1
position: 435188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:435959-436226:1:exon

position:435959:1
position: 435959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436226:1
position: 436226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:436805-437053:1:exon

position:436805:1
position: 436805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437053:1
position: 437053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:437495-437647:1:exon

position:437495:1
position: 437495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437647:1
position: 437647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:437847-438020:1:exon

position:437847:1
position: 437847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438020:1
position: 438020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:438672-438808:1:exon

position:438672:1
position: 438672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438808:1
position: 438808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:439514-439609:1:exon

position:439514:1
position: 439514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439609:1
position: 439609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:440519-440686:1:exon

position:440519:1
position: 440519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440686:1
position: 440686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:441418-441613:1:exon

position:441418:1
position: 441418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441613:1
position: 441613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:442034-442042:1:exon

position:442034:1
position: 442034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442042:1
position: 442042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:442395-442559:1:exon

position:442395:1
position: 442395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442559:1
position: 442559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:442862-443017:1:exon

position:442862:1
position: 442862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443017:1
position: 443017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:443863-444059:1:exon

position:443863:1
position: 443863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444059:1
position: 444059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:444725-445216:1:exon

position:444725:1
position: 444725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445216:1
position: 445216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:445424-445870:1:exon

position:445424:1
position: 445424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445870:1
position: 445870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:446438-447813:1:exon

position:446438:1
position: 446438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

emsy
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: emsy
product: EMSY transcriptional repressor, BRCA2 interacting, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_041232626.1
SIO_010081: emsy
subclass of: SO_0000673
so part of: emsy
location: join(429902..430296,431524..431632,432242..432341,432925..432999,433505..433680,434341..434493,434929..435188,435959..436226,436805..437053,437495..437647,437847..438020,438672..438808,440519..440686,441418..441612,442033..442040,442393..442559,442862..443017,443863..444059,444725..445216,445424..445870,446438..447813)
location: region:429902-447813:1
so has part: feature:429902-430296:1:exon
so has part: feature:431524-431632:1:exon
so has part: feature:432242-432341:1:exon
so has part: feature:432925-432999:1:exon
so has part: feature:433505-433680:1:exon
so has part: feature:434341-434493:1:exon
so has part: feature:434929-435188:1:exon
so has part: feature:435959-436226:1:exon
so has part: feature:436805-437053:1:exon
so has part: feature:437495-437647:1:exon
so has part: feature:437847-438020:1:exon
so has part: feature:438672-438808:1:exon
so has part: feature:440519-440686:1:exon
so has part: feature:441418-441612:1:exon
so has part: feature:442033-442040:1:exon
so has part: feature:442393-442559:1:exon
so has part: feature:442862-443017:1:exon
so has part: feature:443863-444059:1:exon
so has part: feature:444725-445216:1:exon
so has part: feature:445424-445870:1:exon
so has part: feature:446438-447813:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:429902-430296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:431524-431632:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432242-432341:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432925-432999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433505-433680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:434341-434493:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:434929-435188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:435959-436226:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436805-437053:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437495-437647:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:437847-438020:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:438672-438808:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440519-440686:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:441418-441612:1:exon

position:441612:1
position: 441612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:442033-442040:1:exon

position:442033:1
position: 442033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442040:1
position: 442040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:442393-442559:1:exon

position:442393:1
position: 442393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:442862-443017:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:443863-444059:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:444725-445216:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:445424-445870:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:446438-447813:1:exon

emsy
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: emsy
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRCA2-interacting transcriptional repressor EMSY isoform X1
translation: MNPEPCFPLQHLMFMIPKEKPQPIARMPVVWPTLLDLNRDECKRILRKLELEAYAGVISALRAQGDLTKEKKDLLGELNKVLSISTERHRAEVRRAVNDERLTTIAYHMSGPNSSSEWSIEGRRLVPLMPRLVPQTAFTVTANAVASTTAQHNTSLLLPAETGNKEVVVCYSYTSTTSTPATATVPSGSAAPVKSPRPASPASNVVVLPSGSTVYVKSVSCSDEDEKPRKRRRTNSSSSSPVVLKEIPKAATPIPKTITVPVSGSPKMSNIMQSIANSLPPHMSPVKITFTKPSTQSTSSSTQKVIIVTTSPSSTFMPNILSKSHNYAAVTKLVSTSVLTAASQKQPIVITASQSSLATGSSESTTLSPAPTCVAVTTVISSSPSVVMSTIAQGASSAAVKAASARLPSPKSLMGSPTQILAQFPKHQHSPKQLAQPSMGALQQQCQTAPGIKPTIQIKQESGEKMQDWRDVHMYRGVKIITQQMQPSKILPKPSTSTLPSSSSSSPIMVVSSNGTIMTTKLVSTATGTQATYSRPTVTPTIGARVAASPGGATYVKTTSGSIITVVPKSLATLGGKIISSNIVSGTTTKITTIPMTSKPNVIVVQKTTGKGTTIQGLPGKNVVTTLLNAGIRYNTEKTRLQTSLPACLSFDLLRDSHLQESKGEKTLQAVPSKPAIITATRPITKMIVTQPKGMGSGVQPATKIIPTKIVYGQQGKTQVLIKPKPMAFQATVVSEQTRQLVSETLQQVSRASEAGGAASQEVALKEELQTFPESSSSSTESSHSSQDSQPVVHVITSRGQEWAEQEVSVESSPTIIYQDVPVESQSATSTIKALLELQQTTVKEKGESKPRQHTIDLSQMAVPIQMAQEKRPSPESPVITAVESDLITEYITTGKSAKPGMSSASISSGEIALTSLLSASQPQSTSLQRAPQQAVPQTPVMVKPIPASSALAVTRFVKQAVTSQVVHSKQAEDVGREEGEVEGDTLDPQTGLFYRSAQQLKQASQQQDPPKLLPPGNPATALNQGAAQQKQPALYQQQQLKPVLQHHLVVKERQVSGAGAQAQAQAQQTVVQVIAVKPPHTPQLPKLQQAPSSQNRPIHTVLSQPPPLQAHHPVSSDKPTMSQVQQPIITQGATVTKITFGSHQPASISKPASGEAAAKLSPVSSTGPAPSSDKSSISDILKISMLEAQIDPSVEPMVVDSSSDCTFSKGAAASQTVASGQLISSTASPVVQSSQSKQLQQSLGGAGTSLHGQFTRIQNLPAQKSKEVDIIQVIPQYSITPDSSQSNVVVEPSGFLEITNFTSQSLEEETVMEQEVDSSNDEGMEASPSQSSIDQAQ
SIO_010081: emsy
subclass of: SO_0000673
so part of: emsy
location: join(430258..430296,431524..431632,432242..432341,432925..432999,433505..433680,434341..434493,434929..435188,435959..436226,436805..437053,437495..437647,437847..438020,438672..438808,439514..439609,440519..440686,441418..441613,442034..442042,442395..442559,442862..443017,443863..444059,444725..445216,445424..445870,446438..446635)
location: region:430258-446635:1
so has part: feature:430258-430296:1:exon
so has part: feature:431524-431632:1:exon
so has part: feature:432242-432341:1:exon
so has part: feature:432925-432999:1:exon
so has part: feature:433505-433680:1:exon
so has part: feature:434341-434493:1:exon
so has part: feature:434929-435188:1:exon
so has part: feature:435959-436226:1:exon
so has part: feature:436805-437053:1:exon
so has part: feature:437495-437647:1:exon
so has part: feature:437847-438020:1:exon
so has part: feature:438672-438808:1:exon
so has part: feature:439514-439609:1:exon
so has part: feature:440519-440686:1:exon
so has part: feature:441418-441613:1:exon
so has part: feature:442034-442042:1:exon
so has part: feature:442395-442559:1:exon
so has part: feature:442862-443017:1:exon
so has part: feature:443863-444059:1:exon
so has part: feature:444725-445216:1:exon
so has part: feature:445424-445870:1:exon
so has part: feature:446438-446635:1:exon

XP_041088559.1
type: Protein
SIO_000068: ncbiprotein

position:430258:1
position: 430258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446635:1
position: 446635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430258-430296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:431524-431632:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432242-432341:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432925-432999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433505-433680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:434341-434493:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:434929-435188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:435959-436226:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436805-437053:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437495-437647:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:437847-438020:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:438672-438808:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:439514-439609:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:440519-440686:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:441418-441613:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:442034-442042:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:442395-442559:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:442862-443017:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:443863-444059:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:444725-445216:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:445424-445870:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:446438-446635:1:exon

emsy
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: emsy
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRCA2-interacting transcriptional repressor EMSY isoform X2
translation: MNPEPCFPLQHLMFMIPKEKPQPIARMPVVWPTLLDLNRDECKRILRKLELEAYAGVISALRAQGDLTKEKKDLLGELNKVLSISTERHRAEVRRAVNDERLTTIAYHMSGPNSSSEWSIEGRRLVPLMPRLVPQTAFTVTANAVASTTAQHNTSLLLPAETGNKEVVVCYSYTSTTSTPATATVPSGSAAPVKSPRPASPASNVVVLPSGSTVYVKSVSCSDEDEKPRKRRRTNSSSSSPVVLKEIPKAATPIPKTITVPVSGSPKMSNIMQSIANSLPPHMSPVKITFTKPSTQSTSSSTQKVIIVTTSPSSTFMPNILSKSHNYAAVTKLVSTSVLTAASQKQPIVITASQSSLATGSSESTTLSPAPTCVAVTTVISSSPSVVMSTIAQGASSAAVKAASARLPSPKSLMGSPTQILAQFPKHQHSPKQLAQPSMGALQQQCQTAPGIKPTIQIKQESGEKMQDWRDVHMYRGVKIITQQMQPSKILPKPSTSTLPSSSSSSPIMVVSSNGTIMTTKLVSTATGTQATYSRPTVTPTIGARVAASPGGATYVKTTSGSIITVVPKSLATLGGKIISSNIVSGTTTKITTIPMTSKPNVIVVQKTTGKGTTIQGLPGKNVVTTLLNAGGEKTLQAVPSKPAIITATRPITKMIVTQPKGMGSGVQPATKIIPTKIVYGQQGKTQVLIKPKPMAFQATVVSEQTRQLVSETLQQVSRASEAGGAASQEVALKEELQTFPESSSSSTESSHSSQDSQPVVHVITSRGQEWAEQEVSVESSPTIIYQDVPVESQSATSTIKALLELQQTTVKEKGESKPRQHTIDLSQMAVPIQMAQEKRPSPESPVITAVESDLITEYITTGKSAKPGMSSASISSGEIALTSLLSASQPQSTSLQRAPQQAVPQTPVMVKPIPASSALAVTRFVKQAVTSQVVHSKQAEDVGREEGEVEGDTLDPQTGLFYRSAQQLKQASQQQDPPKLLPPGNPATALNQGAAQQKQPALYQQQQLKPVLQHHLVVKERQVSGAGAQAQAQAQQTVVQVIAVKPPHTPQLPKLQQAPSSQNRPIHTVLSQPPPLQAHHPVSSDKPTMSQVQQPIITQGATVTKITFGSHQPASISKPASGEAAAKLSPVSSTGPAPSSDKSSISDILKISMLEAQIDPSVEPMVVDSSSDCTFSKGAAASQTVASGQLISSTASPVVQSSQSKQLQQSLGGAGTSLHGQFTRIQNLPAQKSKEVDIIQVIPQYSITPDSSQSNVVVEPSGFLEITNFTSQSLEEETVMEQEVDSSNDEGMEASPSQSSIDQAQ
SIO_010081: emsy
subclass of: SO_0000673
so part of: emsy
location: join(430258..430296,431524..431632,432242..432341,432925..432999,433505..433680,434341..434493,434929..435188,435959..436226,436805..437053,437495..437647,437847..438020,438672..438808,440519..440686,441418..441612,442033..442040,442393..442559,442862..443017,443863..444059,444725..445216,445424..445870,446438..446635)
location: region:430258-446635:1
so has part: feature:430258-430296:1:exon
so has part: feature:431524-431632:1:exon
so has part: feature:432242-432341:1:exon
so has part: feature:432925-432999:1:exon
so has part: feature:433505-433680:1:exon
so has part: feature:434341-434493:1:exon
so has part: feature:434929-435188:1:exon
so has part: feature:435959-436226:1:exon
so has part: feature:436805-437053:1:exon
so has part: feature:437495-437647:1:exon
so has part: feature:437847-438020:1:exon
so has part: feature:438672-438808:1:exon
so has part: feature:440519-440686:1:exon
so has part: feature:441418-441612:1:exon
so has part: feature:442033-442040:1:exon
so has part: feature:442393-442559:1:exon
so has part: feature:442862-443017:1:exon
so has part: feature:443863-444059:1:exon
so has part: feature:444725-445216:1:exon
so has part: feature:445424-445870:1:exon
so has part: feature:446438-446635:1:exon

XP_041088560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430258-430296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:431524-431632:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432242-432341:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432925-432999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433505-433680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:434341-434493:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:434929-435188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:435959-436226:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436805-437053:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437495-437647:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:437847-438020:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:438672-438808:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440519-440686:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:441418-441612:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:442033-442040:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:442393-442559:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:442862-443017:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:443863-444059:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:444725-445216:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:445424-445870:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:446438-446635:1:exon

LOC121302623
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302623
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(442099..456147)
location: region:442099-456147:-1
so has part: feature:442099-456147:-1:exon
subclass of: SO_0000011

121302623
type: Gene
SIO_000068: ncbigene

position:442099:-1
position: 442099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456147:-1
position: 456147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442099-456147:-1:exon

LOC121302623
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: lncRNA
gene: LOC121302623
product: uncharacterized LOC121302623, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005947715.1
SIO_010081: LOC121302623
subclass of: SO_0000673
so part of: LOC121302623
location: complement(join(442099..442226,454949..455538,455748..456147))
location: region:442099-456147:-1
so has part: feature:455748-456147:-1:exon
so has part: feature:454949-455538:-1:exon
so has part: feature:442099-442226:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:455748-456147:-1:exon

position:455748:-1
position: 455748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:454949-455538:-1:exon

position:454949:-1
position: 454949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455538:-1
position: 455538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:442099-442226:-1:exon

position:442226:-1
position: 442226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121302623
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: lncRNA
gene: LOC121302623
product: uncharacterized LOC121302623, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005947716.1
SIO_010081: LOC121302623
subclass of: SO_0000673
so part of: LOC121302623
location: complement(join(450148..450453,454949..455538,455748..456147))
location: region:450148-456147:-1
so has part: feature:455748-456147:-1:exon
so has part: feature:454949-455538:-1:exon
so has part: feature:450148-450453:-1:exon

position:450148:-1
position: 450148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455748-456147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:454949-455538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450148-450453:-1:exon

position:450453:-1
position: 450453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lrrc32
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: lrrc32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(478372..486234)
location: region:478372-486234:-1
so has part: feature:478372-486234:-1:exon
subclass of: SO_0000010

121302922
type: Gene
SIO_000068: ncbigene

position:478372:-1
position: 478372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486234:-1
position: 486234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478372-486234:-1:exon

lrrc32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: lrrc32
product: leucine rich repeat containing 32, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_041233273.1
SIO_010081: lrrc32
subclass of: SO_0000673
so part of: lrrc32
location: complement(join(478372..480689,483364..483454,486158..486234))
location: region:478372-486234:-1
so has part: feature:486158-486234:-1:exon
so has part: feature:483364-483454:-1:exon
so has part: feature:478372-480689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:486158-486234:-1:exon

position:486158:-1
position: 486158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:483364-483454:-1:exon

position:483364:-1
position: 483364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483454:-1
position: 483454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:478372-480689:-1:exon

position:480689:-1
position: 480689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lrrc32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: lrrc32
product: leucine rich repeat containing 32, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041233272.1
SIO_010081: lrrc32
subclass of: SO_0000673
so part of: lrrc32
location: complement(join(478372..480689,483364..483454,484843..484968))
location: region:478372-484968:-1
so has part: feature:484843-484968:-1:exon
so has part: feature:483364-483454:-1:exon
so has part: feature:478372-480689:-1:exon

position:484968:-1
position: 484968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484843-484968:-1:exon

position:484843:-1
position: 484843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:483364-483454:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:478372-480689:-1:exon

lrrc32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: lrrc32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transforming growth factor beta activator LRRC32
translation: MAVYLLFLLTAVSEVAATFRPRQLSPCRVVEMDVYCNNMNLKQIPSELPSGFHRLDLSENLLQNITLELLPFNDSVQQLDLHSNKIQFIQPGLFQQMDNLEVLDISRNFLDVFAQSKTEIGPLPSIKTLDLSGNNLYTGMTVYFLRDAPALRNLSLSGNSITKIEADTFSGSLALSNIDLHNNVVLEIEDGAFESLHNLSELNLSMNSITCITDFNLSQLKLLNLSKNSIESFHTAEFDKEYDLLYLDLSENKLLYFPELPKRNRLMYLDLSRNIIQGVITGADENDYISHGWFKATNQPLNRTLLDNGVPFTNLSSLLYLDMSYNEIKSIPVEFFSSMGSLEFLNLSNNCLESFTSSSSCSLNSLDILDLNFNALRNLSFAENTLRALTELYLKGNNLQALAPDTFSILHSIQVIDLRENHMSVCGWYPLFPKWGSTVQEADCVSFTGIPTLRYLYLSGNAILSLPQYAFRQTPLLLLDLSKNPGIEMNSKAFSGLESSLMYLSLDGNNLPALNPDLSLLTSLKTLNLSRNLLTGLPPWSKDSSLEVLDLQNNILISLQYNVVLVLEKTLKTLYLAGNPLNCCSNPRFLHMVQKSVIDIPDIDSVTCHYVKNSEYTEISILRVVVDECAQQDIRSIGIIITIITVLALTVLLVVLSKYCHQRRLRPEGSYKA
SIO_010081: lrrc32
subclass of: SO_0000673
so part of: lrrc32
location: complement(join(478755..480689,483364..483450))
location: region:478755-483450:-1
so has part: feature:483364-483450:-1:exon
so has part: feature:478755-480689:-1:exon

XP_041089206.1
type: Protein
SIO_000068: ncbiprotein

position:478755:-1
position: 478755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483450:-1
position: 483450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483364-483450:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478755-480689:-1:exon

lrrc32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: lrrc32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transforming growth factor beta activator LRRC32
translation: MAVYLLFLLTAVSEVAATFRPRQLSPCRVVEMDVYCNNMNLKQIPSELPSGFHRLDLSENLLQNITLELLPFNDSVQQLDLHSNKIQFIQPGLFQQMDNLEVLDISRNFLDVFAQSKTEIGPLPSIKTLDLSGNNLYTGMTVYFLRDAPALRNLSLSGNSITKIEADTFSGSLALSNIDLHNNVVLEIEDGAFESLHNLSELNLSMNSITCITDFNLSQLKLLNLSKNSIESFHTAEFDKEYDLLYLDLSENKLLYFPELPKRNRLMYLDLSRNIIQGVITGADENDYISHGWFKATNQPLNRTLLDNGVPFTNLSSLLYLDMSYNEIKSIPVEFFSSMGSLEFLNLSNNCLESFTSSSSCSLNSLDILDLNFNALRNLSFAENTLRALTELYLKGNNLQALAPDTFSILHSIQVIDLRENHMSVCGWYPLFPKWGSTVQEADCVSFTGIPTLRYLYLSGNAILSLPQYAFRQTPLLLLDLSKNPGIEMNSKAFSGLESSLMYLSLDGNNLPALNPDLSLLTSLKTLNLSRNLLTGLPPWSKDSSLEVLDLQNNILISLQYNVVLVLEKTLKTLYLAGNPLNCCSNPRFLHMVQKSVIDIPDIDSVTCHYVKNSEYTEISILRVVVDECAQQDIRSIGIIITIITVLALTVLLVVLSKYCHQRRLRPEGSYKA
SIO_010081: lrrc32
subclass of: SO_0000673
so part of: lrrc32
location: complement(join(478755..480689,483364..483450))
location: region:478755-483450:-1
so has part: feature:483364-483450:-1:exon
so has part: feature:478755-480689:-1:exon

XP_041089207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483364-483450:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478755-480689:-1:exon

klhl35
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: klhl35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 489896..497606
location: region:489896-497606:1
so has part: feature:489896-497606:1:exon
subclass of: SO_0000010

121302555
type: Gene
SIO_000068: ncbigene

position:489896:1
position: 489896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497606:1
position: 497606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489896-497606:1:exon

klhl35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: klhl35
product: kelch-like family member 35
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041232552.1
SIO_010081: klhl35
subclass of: SO_0000673
so part of: klhl35
location: join(489896..490582,491487..492424,492674..492858,493844..493962,496287..496475,496945..497133,497311..497606)
location: region:489896-497606:1
so has part: feature:489896-490582:1:exon
so has part: feature:491487-492424:1:exon
so has part: feature:492674-492858:1:exon
so has part: feature:493844-493962:1:exon
so has part: feature:496287-496475:1:exon
so has part: feature:496945-497133:1:exon
so has part: feature:497311-497606:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489896-490582:1:exon

position:490582:1
position: 490582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:491487-492424:1:exon

position:491487:1
position: 491487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492424:1
position: 492424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:492674-492858:1:exon

position:492674:1
position: 492674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492858:1
position: 492858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:493844-493962:1:exon

position:493844:1
position: 493844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493962:1
position: 493962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:496287-496475:1:exon

position:496287:1
position: 496287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496475:1
position: 496475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:496945-497133:1:exon

position:496945:1
position: 496945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497133:1
position: 497133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:497311-497606:1:exon

position:497311:1
position: 497311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

klhl35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: klhl35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 35
translation: MGFGNSGEPQVEQRKHVEVCSGPCHAELILQTLNIYRQSGLFTDVVLLAGTEEFPCHRATLSANSAYFRAMFHCSLKESRQDMVKIQGISPCTMETLLNFMYEGKADIQEESVEKLFQASDLLQVTVLRDACVEFLEKRIDHSNCLGILGFARSFFIQSLSEQCQALLFRDFAEVCQHEEFLLLSQEELAAFLSSEQLAVEREEIVLEAVLKWVHHDVPCRKGALKELLGLVRLPLLDPVYFFNKVETDDIIQDSQECRPLLLEARKYHVLGNEVTSPRTRPRSFTGLSEVIAVIGGCDKKGFTQLSFTEKYNPKTTEWVCAASIPGYSKSEFAACTLQNDIYISGGHYNSSDVWRYFSQLDIWVRVASLIKGRWRHKMAALQGRLYAVGGFDGMDRMGSVERYSSFSNEWLPVAPLLEAVSSAALVSCGEMLYLIGGAVNDFSNTNKVQCYDPMENQWAYVSPAPFTLRCINAVSFNGTIYVMGGLMDKIYSYSPKMDVWSEVATLPVSVESCGVTVCNARIYILGGRDKSGIGIDRVHSLDPSTGELTEEPPMSRCVSYHGCVTITQHIRR
SIO_010081: klhl35
subclass of: SO_0000673
so part of: klhl35
location: join(491574..492424,492674..492858,493844..493962,496287..496475,496945..497133,497311..497499)
location: region:491574-497499:1
so has part: feature:491574-492424:1:exon
so has part: feature:492674-492858:1:exon
so has part: feature:493844-493962:1:exon
so has part: feature:496287-496475:1:exon
so has part: feature:496945-497133:1:exon
so has part: feature:497311-497499:1:exon

XP_041088486.1
type: Protein
SIO_000068: ncbiprotein

position:491574:1
position: 491574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497499:1
position: 497499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491574-492424:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492674-492858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493844-493962:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:496287-496475:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:496945-497133:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497311-497499:1:exon

mpzl1l
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: mpzl1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(508356..522879)
location: region:508356-522879:-1
so has part: feature:508356-522879:-1:exon
subclass of: SO_0000010

121302876
type: Gene
SIO_000068: ncbigene

position:508356:-1
position: 508356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522879:-1
position: 522879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508356-522879:-1:exon

mpzl1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: mpzl1l
product: myelin protein zero-like 1 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041233171.1
SIO_010081: mpzl1l
subclass of: SO_0000673
so part of: mpzl1l
location: complement(join(508356..508996,511191..511296,515331..515475,516373..516586,518370..518536,522601..522879))
location: region:508356-522879:-1
so has part: feature:522601-522879:-1:exon
so has part: feature:518370-518536:-1:exon
so has part: feature:516373-516586:-1:exon
so has part: feature:515331-515475:-1:exon
so has part: feature:511191-511296:-1:exon
so has part: feature:508356-508996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:522601-522879:-1:exon

position:522601:-1
position: 522601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:518370-518536:-1:exon

position:518370:-1
position: 518370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518536:-1
position: 518536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:516373-516586:-1:exon

position:516373:-1
position: 516373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516586:-1
position: 516586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:515331-515475:-1:exon

position:515331:-1
position: 515331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515475:-1
position: 515475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:511191-511296:-1:exon

position:511191:-1
position: 511191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511296:-1
position: 511296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:508356-508996:-1:exon

position:508996:-1
position: 508996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mpzl1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: mpzl1l
product: myelin protein zero-like 1 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041233172.1
SIO_010081: mpzl1l
subclass of: SO_0000673
so part of: mpzl1l
location: complement(join(508356..508996,511191..511296,515331..515463,516373..516586,518370..518536,522601..522876))
location: region:508356-522876:-1
so has part: feature:522601-522876:-1:exon
so has part: feature:518370-518536:-1:exon
so has part: feature:516373-516586:-1:exon
so has part: feature:515331-515463:-1:exon
so has part: feature:511191-511296:-1:exon
so has part: feature:508356-508996:-1:exon

position:522876:-1
position: 522876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522601-522876:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518370-518536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516373-516586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:515331-515463:-1:exon

position:515463:-1
position: 515463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:511191-511296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508356-508996:-1:exon

mpzl1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: mpzl1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin protein zero-like 1 like isoform X2
translation: MEIHKGFYHGRRASGFKPTMGIKLRNPSQIAAVWLGLQLLTWAAVPGSAVDVYTPAELFVENGTDGTLRCTFTSKELVSSGTSFSWNFHPEGGGDAVSLFHYTGGKPYFGKTPQFKDRVRWVGDLNKRDASISITKMIFKDNGTYSCDVKNPPDIDVKPSSIQLRVVEKGSLPLSNAGVIAGAVIGAILGLLLIIVIVFYLLFRRKQASKDYIGCSSSESVVPQETRALKKEVSDKEDSKCSSPSGPAQGPVIYAQLDHSGKKMSNTVYKTESVVYANIRKE
SIO_010081: mpzl1l
subclass of: SO_0000673
so part of: mpzl1l
location: complement(join(508895..508996,511191..511296,515331..515463,516373..516586,518370..518536,522601..522727))
location: region:508895-522727:-1
so has part: feature:522601-522727:-1:exon
so has part: feature:518370-518536:-1:exon
so has part: feature:516373-516586:-1:exon
so has part: feature:515331-515463:-1:exon
so has part: feature:511191-511296:-1:exon
so has part: feature:508895-508996:-1:exon

XP_041089106.1
type: Protein
SIO_000068: ncbiprotein

position:508895:-1
position: 508895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522727:-1
position: 522727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522601-522727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518370-518536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516373-516586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:515331-515463:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:511191-511296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508895-508996:-1:exon

mpzl1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: mpzl1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin protein zero-like 1 like isoform X1
translation: MEIHKGFYHGRRASGFKPTMGIKLRNPSQIAAVWLGLQLLTWAAVPGSAVDVYTPAELFVENGTDGTLRCTFTSKELVSSGTSFSWNFHPEGGGDAVSLFHYTGGKPYFGKTPQFKDRVRWVGDLNKRDASISITKMIFKDNGTYSCDVKNPPDIDVKPSSIQLRVVEKVSVEGSLPLSNAGVIAGAVIGAILGLLLIIVIVFYLLFRRKQASKDYIGCSSSESVVPQETRALKKEVSDKEDSKCSSPSGPAQGPVIYAQLDHSGKKMSNTVYKTESVVYANIRKE
SIO_010081: mpzl1l
subclass of: SO_0000673
so part of: mpzl1l
location: complement(join(508895..508996,511191..511296,515331..515475,516373..516586,518370..518536,522601..522727))
location: region:508895-522727:-1
so has part: feature:522601-522727:-1:exon
so has part: feature:518370-518536:-1:exon
so has part: feature:516373-516586:-1:exon
so has part: feature:515331-515475:-1:exon
so has part: feature:511191-511296:-1:exon
so has part: feature:508895-508996:-1:exon

XP_041089105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522601-522727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518370-518536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516373-516586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:515331-515475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:511191-511296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508895-508996:-1:exon

trnap-agg
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: trnap-agg
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 522983..523054
location: region:522983-523054:1
so has part: feature:522983-523054:1:exon
subclass of: SO_0000663

121302962
type: Gene
SIO_000068: ncbigene

position:522983:1
position: 522983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523054:1
position: 523054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522983-523054:1:exon

trnap-agg
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7913
gene: trnap-agg
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA proline (anticodon AGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:523015..523017,aa:Pro,seq:agg)
SIO_010081: trnap-agg
subclass of: SO_0000673
so part of: trnap-agg
location: 522983..523054
location: region:522983-523054:1
so has part: feature:522983-523054:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:522983-523054:1:exon

trnap-cgg
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: trnap-cgg
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(523476..523547)
location: region:523476-523547:-1
so has part: feature:523476-523547:-1:exon
subclass of: SO_0000663

121302964
type: Gene
SIO_000068: ncbigene

position:523476:-1
position: 523476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523547:-1
position: 523547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523476-523547:-1:exon

trnap-cgg
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7913
gene: trnap-cgg
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA proline (anticodon CGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(523513..523515),aa:Pro,seq:cgg)
SIO_010081: trnap-cgg
subclass of: SO_0000673
so part of: trnap-cgg
location: complement(523476..523547)
location: region:523476-523547:-1
so has part: feature:523476-523547:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:523476-523547:-1:exon

LOC121302571
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 527151..528225
location: region:527151-528225:1
so has part: feature:527151-528225:1:exon
subclass of: SO_0000010

121302571
type: Gene
SIO_000068: ncbigene

position:527151:1
position: 527151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528225:1
position: 528225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527151-528225:1:exon

LOC121302571
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302571
product: odorant receptor 131-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041232573.1
SIO_010081: LOC121302571
subclass of: SO_0000673
so part of: LOC121302571
location: 527151..528225
location: region:527151-528225:1
so has part: feature:527151-528225:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527151-528225:1:exon

LOC121302571
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: odorant receptor 131-2-like
translation: MNSSTAVNATSLPAISLIEHGIIQLQLALILGLSSFFLYINMNMILIFCKEPVYRDSSRYILFIHMLFNDTLQSLISVFLYFLVVFRIQFNITLCTFFVHLGGNAAMNTPFSLAVMSLDRYVAICFPLRYAELSSVRRAYLAIGVTWLIGSVPSGSDLFIVLSKLPLSYFNQKALCSRAVLIQSSDQQLKQAVFNGLYFTVVWIIILYTYVQIMLQARKLRAPGSQAFKAQKTVLLHAVQLLLSMAFFLSPLTEYIFQYTEPMVFAHVRYVNFFLTIVLPKFLSPLIYGLRDDNLKKHLQLYLKCNFNKVNPTAVHC
SIO_010081: LOC121302571
subclass of: SO_0000673
so part of: LOC121302571
location: 527151..528104
location: region:527151-528104:1
so has part: feature:527151-528104:1:exon

XP_041088507.1
type: Protein
SIO_000068: ncbiprotein

position:528104:1
position: 528104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527151-528104:1:exon

LOC121302572
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(529735..530556)
location: region:529735-530556:-1
so has part: feature:529735-530556:-1:exon
subclass of: SO_0000010

121302572
type: Gene
SIO_000068: ncbigene

position:529735:-1
position: 529735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530556:-1
position: 530556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529735-530556:-1:exon

LOC121302572
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302572
product: odorant receptor 131-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_041232574.1
SIO_010081: LOC121302572
subclass of: SO_0000673
so part of: LOC121302572
location: complement(529735..530556)
location: region:529735-530556:-1
so has part: feature:529735-530556:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529735-530556:-1:exon

LOC121302572
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: odorant receptor 131-2-like
translation: MVFIYFKEPVYQGVPRYMLFVHLLINDFVQAALCVFLFLNACLQGTMLLSVCSVIVLLSACTSMNTPLTLAVMSLERYVAICFPLHHVQLCTVNRGYISVALIWLLGILPCISDICIAYTYGPPGYFQRYFNCRRSLFIILPSQSTKQAALNALYFSSIWAVVIYTYLQILLTARKAACDKSSASKGQRTVLLHGVQLVLSMSFFIYPLTEYFLVGQPQEVTRHVFFFNYYVTLVLPRCLTPLIYGVRDENFKRHLKQYLCLCPKKVQPLGSN
SIO_010081: LOC121302572
subclass of: SO_0000673
so part of: LOC121302572
location: complement(529735..530556)
location: region:529735-530556:-1
so has part: feature:529735-530556:-1:exon

XP_041088508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529735-530556:-1:exon

LOC121302573
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302573
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(532910..534284)
location: region:532910-534284:-1
so has part: feature:532910-534284:-1:exon
subclass of: SO_0000010

121302573
type: Gene
SIO_000068: ncbigene

position:532910:-1
position: 532910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534284:-1
position: 534284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532910-534284:-1:exon

LOC121302573
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302573
product: odorant receptor 131-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041232575.1
SIO_010081: LOC121302573
subclass of: SO_0000673
so part of: LOC121302573
location: complement(532910..534284)
location: region:532910-534284:-1
so has part: feature:532910-534284:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:532910-534284:-1:exon

LOC121302573
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302573
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: odorant receptor 131-2-like
translation: MVFIYFKEPVYQGVLRYMLFIHLLVNDFLQTALVVLLFLFAFFKGTMLLSVCSVIVLLSSCTSMNTPLTLAVMSLERYVAICFPLHHVQLCTVNRGYISVALIWLIGILPCISDICIAYAYWPPGYFQRYLNCKRSVFIILPSQSVKQAAFNAAYFSSIWAVVIYTYLQILLTARKAACDKSSASKGQRTVLLHGVQLVLSMSFFIYPLTEYFLVGQPQEVIRHVSFFNYYVTLVLPRCLTPLIYGVRDENFKKHLKLYLSSCRKKVQPLQSN
SIO_010081: LOC121302573
subclass of: SO_0000673
so part of: LOC121302573
location: complement(533463..534284)
location: region:533463-534284:-1
so has part: feature:533463-534284:-1:exon

XP_041088509.1
type: Protein
SIO_000068: ncbiprotein

position:533463:-1
position: 533463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533463-534284:-1:exon

zdhhc20b
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: zdhhc20b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(544429..559224)
location: region:544429-559224:-1
so has part: feature:544429-559224:-1:exon
subclass of: SO_0000010

121302919
type: Gene
SIO_000068: ncbigene

position:544429:-1
position: 544429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559224:-1
position: 559224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544429-559224:-1:exon

zdhhc20b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: zdhhc20b
product: zinc finger DHHC-type palmitoyltransferase 20b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_041233267.1
SIO_010081: zdhhc20b
subclass of: SO_0000673
so part of: zdhhc20b
location: complement(join(544429..545106,545497..545554,545726..545841,546592..546681,547506..547632,548567..548699,550654..550774,551101..551133,552209..552278,552365..552485,555571..555665,556245..556271,559086..559224))
location: region:544429-559224:-1
so has part: feature:559086-559224:-1:exon
so has part: feature:556245-556271:-1:exon
so has part: feature:555571-555665:-1:exon
so has part: feature:552365-552485:-1:exon
so has part: feature:552209-552278:-1:exon
so has part: feature:551101-551133:-1:exon
so has part: feature:550654-550774:-1:exon
so has part: feature:548567-548699:-1:exon
so has part: feature:547506-547632:-1:exon
so has part: feature:546592-546681:-1:exon
so has part: feature:545726-545841:-1:exon
so has part: feature:545497-545554:-1:exon
so has part: feature:544429-545106:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:559086-559224:-1:exon

position:559086:-1
position: 559086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:556245-556271:-1:exon

position:556245:-1
position: 556245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556271:-1
position: 556271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:555571-555665:-1:exon

position:555571:-1
position: 555571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555665:-1
position: 555665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552365-552485:-1:exon

position:552365:-1
position: 552365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552485:-1
position: 552485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:552209-552278:-1:exon

position:552209:-1
position: 552209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552278:-1
position: 552278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:551101-551133:-1:exon

position:551101:-1
position: 551101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551133:-1
position: 551133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:550654-550774:-1:exon

position:550654:-1
position: 550654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550774:-1
position: 550774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:548567-548699:-1:exon

position:548567:-1
position: 548567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548699:-1
position: 548699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:547506-547632:-1:exon

position:547506:-1
position: 547506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547632:-1
position: 547632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:546592-546681:-1:exon

position:546592:-1
position: 546592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546681:-1
position: 546681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:545726-545841:-1:exon

position:545726:-1
position: 545726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545841:-1
position: 545841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:545497-545554:-1:exon

position:545497:-1
position: 545497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545554:-1
position: 545554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:544429-545106:-1:exon

position:545106:-1
position: 545106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

zdhhc20b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: zdhhc20b
product: zinc finger DHHC-type palmitoyltransferase 20b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041233266.1
SIO_010081: zdhhc20b
subclass of: SO_0000673
so part of: zdhhc20b
location: complement(join(544429..545106,545497..545554,545726..545841,546592..546681,547506..547632,548567..548699,549340..549375,550654..550774,551101..551133,552209..552278,552365..552485,555571..555665,556245..556271,559086..559224))
location: region:544429-559224:-1
so has part: feature:559086-559224:-1:exon
so has part: feature:556245-556271:-1:exon
so has part: feature:555571-555665:-1:exon
so has part: feature:552365-552485:-1:exon
so has part: feature:552209-552278:-1:exon
so has part: feature:551101-551133:-1:exon
so has part: feature:550654-550774:-1:exon
so has part: feature:549340-549375:-1:exon
so has part: feature:548567-548699:-1:exon
so has part: feature:547506-547632:-1:exon
so has part: feature:546592-546681:-1:exon
so has part: feature:545726-545841:-1:exon
so has part: feature:545497-545554:-1:exon
so has part: feature:544429-545106:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:559086-559224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556245-556271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555571-555665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552365-552485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552209-552278:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551101-551133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:550654-550774:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:549340-549375:-1:exon

position:549340:-1
position: 549340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549375:-1
position: 549375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:548567-548699:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:547506-547632:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546592-546681:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545726-545841:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545497-545554:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:544429-545106:-1:exon

zdhhc20b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: zdhhc20b
product: zinc finger DHHC-type palmitoyltransferase 20b, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041233268.1
SIO_010081: zdhhc20b
subclass of: SO_0000673
so part of: zdhhc20b
location: complement(join(544429..545106,545497..545554,545726..545841,546592..546681,547506..547632,548567..548699,549340..549375,550654..550774,551101..551133,552209..552278,552365..552485,555571..555665,556245..556271,558877..559059))
location: region:544429-559059:-1
so has part: feature:558877-559059:-1:exon
so has part: feature:556245-556271:-1:exon
so has part: feature:555571-555665:-1:exon
so has part: feature:552365-552485:-1:exon
so has part: feature:552209-552278:-1:exon
so has part: feature:551101-551133:-1:exon
so has part: feature:550654-550774:-1:exon
so has part: feature:549340-549375:-1:exon
so has part: feature:548567-548699:-1:exon
so has part: feature:547506-547632:-1:exon
so has part: feature:546592-546681:-1:exon
so has part: feature:545726-545841:-1:exon
so has part: feature:545497-545554:-1:exon
so has part: feature:544429-545106:-1:exon

position:559059:-1
position: 559059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558877-559059:-1:exon

position:558877:-1
position: 558877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:556245-556271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555571-555665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552365-552485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552209-552278:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551101-551133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:550654-550774:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:549340-549375:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548567-548699:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:547506-547632:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546592-546681:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545726-545841:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545497-545554:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:544429-545106:-1:exon

zdhhc20b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: zdhhc20b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20-B isoform X2
translation: MAPCHVLKCCQKVLSWVPVVFIALVVGWSYYAYVLELCIFTIRNTGEKVVYLVIFHLSFIMFVWSYWKTIFSKPANPSKEFCLPKADKEQYEREERPEAQQEILKRVAQDLPLYTRTGTGAVRYCDRCQVIKPDRCHHCSACDMCVLKMDHHCPWVNNCVGFSNYKFFVLFLAYSLIYCLFIAATVLQYFIKFWASELPDSHAKFHVLFLFFVAAMFFISILSLFSYHCWLVGKNRSTIEAFRGPVFRNGPDRNGFSLGFSKNLKEVFGDEKKYWLVPVFTSLGDGSTFPTRLVSLDPEQPTIDVQPESAKSVADGHSCATRPLSESQNRLLGNDQHSTEDGLDADHLKFDAKNNVTVSVESES
SIO_010081: zdhhc20b
subclass of: SO_0000673
so part of: zdhhc20b
location: complement(join(545511..545554,545726..545841,546592..546681,547506..547632,548567..548699,550654..550774,551101..551133,552209..552278,552365..552485,555571..555665,556245..556271,559086..559203))
location: region:545511-559203:-1
so has part: feature:559086-559203:-1:exon
so has part: feature:556245-556271:-1:exon
so has part: feature:555571-555665:-1:exon
so has part: feature:552365-552485:-1:exon
so has part: feature:552209-552278:-1:exon
so has part: feature:551101-551133:-1:exon
so has part: feature:550654-550774:-1:exon
so has part: feature:548567-548699:-1:exon
so has part: feature:547506-547632:-1:exon
so has part: feature:546592-546681:-1:exon
so has part: feature:545726-545841:-1:exon
so has part: feature:545511-545554:-1:exon

XP_041089201.1
type: Protein
SIO_000068: ncbiprotein

position:545511:-1
position: 545511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559203:-1
position: 559203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559086-559203:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556245-556271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555571-555665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552365-552485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552209-552278:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551101-551133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:550654-550774:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:548567-548699:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547506-547632:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546592-546681:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545726-545841:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545511-545554:-1:exon

zdhhc20b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: zdhhc20b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20-B isoform X1
translation: MAPCHVLKCCQKVLSWVPVVFIALVVGWSYYAYVLELCIFTIRNTGEKVVYLVIFHLSFIMFVWSYWKTIFSKPANPSKEFCLPKADKEQYEREERPEAQQEILKRVAQDLPLYTRTGTGAVRYCDRCQVIKPDRCHHCSACDMCVLKMDHHCPWVNNCVGFSNYKFFVLFLAYSLIYCLFIAATVLQYFIKFWALCRRKAAENCPKSELPDSHAKFHVLFLFFVAAMFFISILSLFSYHCWLVGKNRSTIEAFRGPVFRNGPDRNGFSLGFSKNLKEVFGDEKKYWLVPVFTSLGDGSTFPTRLVSLDPEQPTIDVQPESAKSVADGHSCATRPLSESQNRLLGNDQHSTEDGLDADHLKFDAKNNVTVSVESES
SIO_010081: zdhhc20b
subclass of: SO_0000673
so part of: zdhhc20b
location: complement(join(545511..545554,545726..545841,546592..546681,547506..547632,548567..548699,549340..549375,550654..550774,551101..551133,552209..552278,552365..552485,555571..555665,556245..556271,559086..559203))
location: region:545511-559203:-1
so has part: feature:559086-559203:-1:exon
so has part: feature:556245-556271:-1:exon
so has part: feature:555571-555665:-1:exon
so has part: feature:552365-552485:-1:exon
so has part: feature:552209-552278:-1:exon
so has part: feature:551101-551133:-1:exon
so has part: feature:550654-550774:-1:exon
so has part: feature:549340-549375:-1:exon
so has part: feature:548567-548699:-1:exon
so has part: feature:547506-547632:-1:exon
so has part: feature:546592-546681:-1:exon
so has part: feature:545726-545841:-1:exon
so has part: feature:545511-545554:-1:exon

XP_041089200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559086-559203:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556245-556271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555571-555665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552365-552485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552209-552278:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551101-551133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:550654-550774:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:549340-549375:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548567-548699:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:547506-547632:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546592-546681:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545726-545841:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:545511-545554:-1:exon

zdhhc20b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: zdhhc20b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20-B isoform X3
translation: MFVWSYWKTIFSKPANPSKEFCLPKADKEQYEREERPEAQQEILKRVAQDLPLYTRTGTGAVRYCDRCQVIKPDRCHHCSACDMCVLKMDHHCPWVNNCVGFSNYKFFVLFLAYSLIYCLFIAATVLQYFIKFWALCRRKAAENCPKSELPDSHAKFHVLFLFFVAAMFFISILSLFSYHCWLVGKNRSTIEAFRGPVFRNGPDRNGFSLGFSKNLKEVFGDEKKYWLVPVFTSLGDGSTFPTRLVSLDPEQPTIDVQPESAKSVADGHSCATRPLSESQNRLLGNDQHSTEDGLDADHLKFDAKNNVTVSVESES
SIO_010081: zdhhc20b
subclass of: SO_0000673
so part of: zdhhc20b
location: complement(join(545511..545554,545726..545841,546592..546681,547506..547632,548567..548699,549340..549375,550654..550774,551101..551133,552209..552278,552365..552485,555571..555630))
location: region:545511-555630:-1
so has part: feature:555571-555630:-1:exon
so has part: feature:552365-552485:-1:exon
so has part: feature:552209-552278:-1:exon
so has part: feature:551101-551133:-1:exon
so has part: feature:550654-550774:-1:exon
so has part: feature:549340-549375:-1:exon
so has part: feature:548567-548699:-1:exon
so has part: feature:547506-547632:-1:exon
so has part: feature:546592-546681:-1:exon
so has part: feature:545726-545841:-1:exon
so has part: feature:545511-545554:-1:exon

XP_041089202.1
type: Protein
SIO_000068: ncbiprotein

position:555630:-1
position: 555630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555571-555630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552365-552485:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552209-552278:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551101-551133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550654-550774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:549340-549375:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:548567-548699:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:547506-547632:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:546592-546681:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:545726-545841:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545511-545554:-1:exon

micu2
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: micu2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(566965..653764)
location: region:566965-653764:-1
so has part: feature:566965-653764:-1:exon
subclass of: SO_0000010

121302933
type: Gene
SIO_000068: ncbigene

position:566965:-1
position: 566965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653764:-1
position: 653764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566965-653764:-1:exon

micu2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: micu2
product: mitochondrial calcium uptake 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_041233295.1
SIO_010081: micu2
subclass of: SO_0000673
so part of: micu2
location: complement(join(566965..568159,568714..568871,569325..569433,569628..569799,572974..573074,575289..575345,578117..578199,579246..579293,582929..583004,583324..583355,605648..605777,653547..653764))
location: region:566965-653764:-1
so has part: feature:653547-653764:-1:exon
so has part: feature:605648-605777:-1:exon
so has part: feature:583324-583355:-1:exon
so has part: feature:582929-583004:-1:exon
so has part: feature:579246-579293:-1:exon
so has part: feature:578117-578199:-1:exon
so has part: feature:575289-575345:-1:exon
so has part: feature:572974-573074:-1:exon
so has part: feature:569628-569799:-1:exon
so has part: feature:569325-569433:-1:exon
so has part: feature:568714-568871:-1:exon
so has part: feature:566965-568159:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:653547-653764:-1:exon

position:653547:-1
position: 653547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:605648-605777:-1:exon

position:605648:-1
position: 605648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605777:-1
position: 605777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:583324-583355:-1:exon

position:583324:-1
position: 583324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583355:-1
position: 583355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:582929-583004:-1:exon

position:582929:-1
position: 582929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583004:-1
position: 583004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:579246-579293:-1:exon

position:579246:-1
position: 579246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579293:-1
position: 579293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:578117-578199:-1:exon

position:578117:-1
position: 578117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578199:-1
position: 578199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:575289-575345:-1:exon

position:575289:-1
position: 575289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575345:-1
position: 575345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:572974-573074:-1:exon

position:572974:-1
position: 572974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573074:-1
position: 573074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:569628-569799:-1:exon

position:569628:-1
position: 569628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569799:-1
position: 569799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:569325-569433:-1:exon

position:569325:-1
position: 569325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569433:-1
position: 569433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:568714-568871:-1:exon

position:568714:-1
position: 568714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568871:-1
position: 568871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:566965-568159:-1:exon

position:568159:-1
position: 568159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

micu2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: micu2
product: mitochondrial calcium uptake 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041233293.1
SIO_010081: micu2
subclass of: SO_0000673
so part of: micu2
location: complement(join(566965..568159,568714..568871,569325..569433,569628..569799,572974..573074,575289..575345,578117..578199,579246..579293,582929..583004,583324..583355,586121..586147,605648..605777,653547..653764))
location: region:566965-653764:-1
so has part: feature:653547-653764:-1:exon
so has part: feature:605648-605777:-1:exon
so has part: feature:586121-586147:-1:exon
so has part: feature:583324-583355:-1:exon
so has part: feature:582929-583004:-1:exon
so has part: feature:579246-579293:-1:exon
so has part: feature:578117-578199:-1:exon
so has part: feature:575289-575345:-1:exon
so has part: feature:572974-573074:-1:exon
so has part: feature:569628-569799:-1:exon
so has part: feature:569325-569433:-1:exon
so has part: feature:568714-568871:-1:exon
so has part: feature:566965-568159:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:653547-653764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:605648-605777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586121-586147:-1:exon

position:586121:-1
position: 586121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586147:-1
position: 586147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:583324-583355:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:582929-583004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579246-579293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578117-578199:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:575289-575345:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:572974-573074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569628-569799:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:569325-569433:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:568714-568871:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:566965-568159:-1:exon

micu2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: micu2
product: mitochondrial calcium uptake 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041233292.1
SIO_010081: micu2
subclass of: SO_0000673
so part of: micu2
location: complement(join(566965..568159,568714..568871,569325..569433,569628..569799,572974..573074,575289..575345,578117..578199,579246..579293,582929..583004,583324..583355,586100..586147,605648..605777,653547..653764))
location: region:566965-653764:-1
so has part: feature:653547-653764:-1:exon
so has part: feature:605648-605777:-1:exon
so has part: feature:586100-586147:-1:exon
so has part: feature:583324-583355:-1:exon
so has part: feature:582929-583004:-1:exon
so has part: feature:579246-579293:-1:exon
so has part: feature:578117-578199:-1:exon
so has part: feature:575289-575345:-1:exon
so has part: feature:572974-573074:-1:exon
so has part: feature:569628-569799:-1:exon
so has part: feature:569325-569433:-1:exon
so has part: feature:568714-568871:-1:exon
so has part: feature:566965-568159:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:653547-653764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:605648-605777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586100-586147:-1:exon

position:586100:-1
position: 586100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:583324-583355:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:582929-583004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579246-579293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578117-578199:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:575289-575345:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:572974-573074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569628-569799:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:569325-569433:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:568714-568871:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:566965-568159:-1:exon

micu2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: micu2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium uptake protein 2, mitochondrial isoform X3
translation: MATWGRVASSLRRGFGRFAGFKPAGVRRAVGPGLLGSLVFGSGLAYYRYGSWAGPSHYTVHAAQEEKSAGEEGISPRKLRFQQFATMEYEGESYMTPRDFLYSIMLENLDHKLTKKILTKKEIDAMLITASKAKAGSSLFRSMGDHGLISYTEYLFLLTILTKPCTGFHIAFKMLDVDGNEQVDKKEFLKLKNIIGKTKEVKMLKDDMEDCVNESPEQINTTLLVYLFGRAGNQKLQYQEFQRFMEDLQAEMQEMEFMQFSKGMGTMRREDFAEWLLHYTNEEDNEAYWENMRKRIPPGQSISFEEFKSFCLFTNNMDDFAFTMKMISEANRPIKMAEFKRAVMIATGHELSESVLDTVFKIFDLDGDNCLSHKEFLGVMNDRIQRGLKVQPQQGIQGYWKCVKRETLKGAQEALRQTGRSPF
SIO_010081: micu2
subclass of: SO_0000673
so part of: micu2
location: complement(join(568055..568159,568714..568871,569325..569433,569628..569799,572974..573074,575289..575345,578117..578199,579246..579293,582929..583004,583324..583355,605648..605777,653547..653747))
location: region:568055-653747:-1
so has part: feature:653547-653747:-1:exon
so has part: feature:605648-605777:-1:exon
so has part: feature:583324-583355:-1:exon
so has part: feature:582929-583004:-1:exon
so has part: feature:579246-579293:-1:exon
so has part: feature:578117-578199:-1:exon
so has part: feature:575289-575345:-1:exon
so has part: feature:572974-573074:-1:exon
so has part: feature:569628-569799:-1:exon
so has part: feature:569325-569433:-1:exon
so has part: feature:568714-568871:-1:exon
so has part: feature:568055-568159:-1:exon

XP_041089229.1
type: Protein
SIO_000068: ncbiprotein

position:568055:-1
position: 568055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653747:-1
position: 653747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:653547-653747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:605648-605777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583324-583355:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582929-583004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:579246-579293:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:578117-578199:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575289-575345:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:572974-573074:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:569628-569799:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569325-569433:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:568714-568871:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:568055-568159:-1:exon

micu2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: micu2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium uptake protein 2, mitochondrial isoform X2
translation: MATWGRVASSLRRGFGRFAGFKPAGVRRAVGPGLLGSLVFGSGLAYYRYGSWAGPSHYTVHAAQEEKSAGEEGISPRKLRFQQFATMEYEGESYMTPRDFLYSIMLENLDHECSGILHHNKLTKKILTKKEIDAMLITASKAKAGSSLFRSMGDHGLISYTEYLFLLTILTKPCTGFHIAFKMLDVDGNEQVDKKEFLKLKNIIGKTKEVKMLKDDMEDCVNESPEQINTTLLVYLFGRAGNQKLQYQEFQRFMEDLQAEMQEMEFMQFSKGMGTMRREDFAEWLLHYTNEEDNEAYWENMRKRIPPGQSISFEEFKSFCLFTNNMDDFAFTMKMISEANRPIKMAEFKRAVMIATGHELSESVLDTVFKIFDLDGDNCLSHKEFLGVMNDRIQRGLKVQPQQGIQGYWKCVKRETLKGAQEALRQTGRSPF
SIO_010081: micu2
subclass of: SO_0000673
so part of: micu2
location: complement(join(568055..568159,568714..568871,569325..569433,569628..569799,572974..573074,575289..575345,578117..578199,579246..579293,582929..583004,583324..583355,586121..586147,605648..605777,653547..653747))
location: region:568055-653747:-1
so has part: feature:653547-653747:-1:exon
so has part: feature:605648-605777:-1:exon
so has part: feature:586121-586147:-1:exon
so has part: feature:583324-583355:-1:exon
so has part: feature:582929-583004:-1:exon
so has part: feature:579246-579293:-1:exon
so has part: feature:578117-578199:-1:exon
so has part: feature:575289-575345:-1:exon
so has part: feature:572974-573074:-1:exon
so has part: feature:569628-569799:-1:exon
so has part: feature:569325-569433:-1:exon
so has part: feature:568714-568871:-1:exon
so has part: feature:568055-568159:-1:exon

XP_041089227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:653547-653747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:605648-605777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586121-586147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583324-583355:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:582929-583004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579246-579293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578117-578199:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:575289-575345:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:572974-573074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569628-569799:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:569325-569433:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:568714-568871:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:568055-568159:-1:exon

micu2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: micu2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium uptake protein 2, mitochondrial isoform X1
translation: MATWGRVASSLRRGFGRFAGFKPAGVRRAVGPGLLGSLVFGSGLAYYRYGSWAGPSHYTVHAAQEEKSAGEEGISPRKLRFQQFATMEYEGESYMTPRDFLYSIMLENLDHECSGILHHSKQNMDKDKLTKKILTKKEIDAMLITASKAKAGSSLFRSMGDHGLISYTEYLFLLTILTKPCTGFHIAFKMLDVDGNEQVDKKEFLKLKNIIGKTKEVKMLKDDMEDCVNESPEQINTTLLVYLFGRAGNQKLQYQEFQRFMEDLQAEMQEMEFMQFSKGMGTMRREDFAEWLLHYTNEEDNEAYWENMRKRIPPGQSISFEEFKSFCLFTNNMDDFAFTMKMISEANRPIKMAEFKRAVMIATGHELSESVLDTVFKIFDLDGDNCLSHKEFLGVMNDRIQRGLKVQPQQGIQGYWKCVKRETLKGAQEALRQTGRSPF
SIO_010081: micu2
subclass of: SO_0000673
so part of: micu2
location: complement(join(568055..568159,568714..568871,569325..569433,569628..569799,572974..573074,575289..575345,578117..578199,579246..579293,582929..583004,583324..583355,586100..586147,605648..605777,653547..653747))
location: region:568055-653747:-1
so has part: feature:653547-653747:-1:exon
so has part: feature:605648-605777:-1:exon
so has part: feature:586100-586147:-1:exon
so has part: feature:583324-583355:-1:exon
so has part: feature:582929-583004:-1:exon
so has part: feature:579246-579293:-1:exon
so has part: feature:578117-578199:-1:exon
so has part: feature:575289-575345:-1:exon
so has part: feature:572974-573074:-1:exon
so has part: feature:569628-569799:-1:exon
so has part: feature:569325-569433:-1:exon
so has part: feature:568714-568871:-1:exon
so has part: feature:568055-568159:-1:exon

XP_041089226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:653547-653747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:605648-605777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586100-586147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583324-583355:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:582929-583004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579246-579293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578117-578199:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:575289-575345:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:572974-573074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569628-569799:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:569325-569433:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:568714-568871:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:568055-568159:-1:exon

LOC121302556
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302556
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 660305..679185
location: region:660305-679185:1
so has part: feature:660305-679185:1:exon
subclass of: SO_0000010

121302556
type: Gene
SIO_000068: ncbigene

position:660305:1
position: 660305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679185:1
position: 679185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660305-679185:1:exon

LOC121302556
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302556
product: fibroblast growth factor 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_041232553.1
SIO_010081: LOC121302556
subclass of: SO_0000673
so part of: LOC121302556
location: join(660305..661500,666947..667050,677749..679185)
location: region:660305-679185:1
so has part: feature:660305-661500:1:exon
so has part: feature:666947-667050:1:exon
so has part: feature:677749-679185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:660305-661500:1:exon

position:661500:1
position: 661500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:666947-667050:1:exon

position:666947:1
position: 666947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667050:1
position: 667050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:677749-679185:1:exon

position:677749:1
position: 677749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121302556
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302556
product: fibroblast growth factor 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_041232554.1
SIO_010081: LOC121302556
subclass of: SO_0000673
so part of: LOC121302556
location: join(660305..660976,661237..661500,666947..667050,677749..679185)
location: region:660305-679185:1
so has part: feature:660305-660976:1:exon
so has part: feature:661237-661500:1:exon
so has part: feature:666947-667050:1:exon
so has part: feature:677749-679185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:660305-660976:1:exon

position:660976:1
position: 660976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:661237-661500:1:exon

position:661237:1
position: 661237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:666947-667050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:677749-679185:1:exon

LOC121302556
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302556
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 9 isoform X2
translation: MPVCEVGNYFAVQDAVPFGNVPVLPADNPVFLSDHLGQSEAGGLPRGAAVTDLDHLKGILRRRQLYCRTGYHLEIFPNGTIQGTRQDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGELYGSEKLTAECVFREQFEENWYNTYSSNLFKHADTGRPYYLGLNKDGTPREGTRTKRHQRFTHFLPRPVDPDKVPELYKDIINQS
SIO_010081: LOC121302556
subclass of: SO_0000673
so part of: LOC121302556
location: join(660967..660976,661237..661500,666947..667050,677749..677994)
location: region:660967-677994:1
so has part: feature:660967-660976:1:exon
so has part: feature:661237-661500:1:exon
so has part: feature:666947-667050:1:exon
so has part: feature:677749-677994:1:exon

XP_041088488.1
type: Protein
SIO_000068: ncbiprotein

position:660967:1
position: 660967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677994:1
position: 677994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660967-660976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661237-661500:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:666947-667050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:677749-677994:1:exon

LOC121302556
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302556
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 9 isoform X1
translation: MAPLGEVGNYFAVQDAVPFGNVPVLPADNPVFLSDHLGQSEAGGLPRGAAVTDLDHLKGILRRRQLYCRTGYHLEIFPNGTIQGTRQDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGELYGSEKLTAECVFREQFEENWYNTYSSNLFKHADTGRPYYLGLNKDGTPREGTRTKRHQRFTHFLPRPVDPDKVPELYKDIINQS
SIO_010081: LOC121302556
subclass of: SO_0000673
so part of: LOC121302556
location: join(661224..661500,666947..667050,677749..677994)
location: region:661224-677994:1
so has part: feature:661224-661500:1:exon
so has part: feature:666947-667050:1:exon
so has part: feature:677749-677994:1:exon

XP_041088487.1
type: Protein
SIO_000068: ncbiprotein

position:661224:1
position: 661224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661224-661500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:666947-667050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677749-677994:1:exon

sgcg
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: sgcg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 684603..718758
location: region:684603-718758:1
so has part: feature:684603-718758:1:exon
subclass of: SO_0000010

121302907
type: Gene
SIO_000068: ncbigene

position:684603:1
position: 684603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718758:1
position: 718758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684603-718758:1:exon

sgcg
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: sgcg
product: sarcoglycan, gamma
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_041233239.1
SIO_010081: sgcg
subclass of: SO_0000673
so part of: sgcg
location: join(684603..684797,692276..692377,695681..695768,701523..701642,712919..712991,717423..717546,717751..718758)
location: region:684603-718758:1
so has part: feature:684603-684797:1:exon
so has part: feature:692276-692377:1:exon
so has part: feature:695681-695768:1:exon
so has part: feature:701523-701642:1:exon
so has part: feature:712919-712991:1:exon
so has part: feature:717423-717546:1:exon
so has part: feature:717751-718758:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:684603-684797:1:exon

position:684797:1
position: 684797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:692276-692377:1:exon

position:692276:1
position: 692276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692377:1
position: 692377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:695681-695768:1:exon

position:695681:1
position: 695681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695768:1
position: 695768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:701523-701642:1:exon

position:701523:1
position: 701523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701642:1
position: 701642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:712919-712991:1:exon

position:712919:1
position: 712919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712991:1
position: 712991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:717423-717546:1:exon

position:717423:1
position: 717423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717546:1
position: 717546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:717751-718758:1:exon

position:717751:1
position: 717751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sgcg
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: sgcg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-sarcoglycan
translation: MVREQYTTTTPGTSLQGPNNEYVYKIGIYGWRKRCLYLLVLLLLIILVVNFALTIWVLRVMWFNPEGMGLLKVTKDGLRLEGESEFLFPLYAKEIHSRTDSSLLLHSSQNIMVDARDMNGNVTARLTVGPKAVQAHGQQFEIISNEGKMLFSANENEVVVGADKLRVTGPEGALFEHSVETPLVKADAFKQLRLESPTRSLSMDAPKGVYIKAQAGNIEAASQMDIVLHTSEGMLVLDSETVRLPRLPRGSRGVPGNSQGLYEVCVCPDGKLYLSVAGEGSTCHEYSAC
SIO_010081: sgcg
subclass of: SO_0000673
so part of: sgcg
location: join(684603..684797,692276..692377,695681..695768,701523..701642,712919..712991,717423..717546,717751..717918)
location: region:684603-717918:1
so has part: feature:684603-684797:1:exon
so has part: feature:692276-692377:1:exon
so has part: feature:695681-695768:1:exon
so has part: feature:701523-701642:1:exon
so has part: feature:712919-712991:1:exon
so has part: feature:717423-717546:1:exon
so has part: feature:717751-717918:1:exon

XP_041089173.1
type: Protein
SIO_000068: ncbiprotein

position:717918:1
position: 717918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684603-684797:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:692276-692377:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:695681-695768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:701523-701642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:712919-712991:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:717423-717546:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:717751-717918:1:exon

sacs
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: sacs
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(719971..751488)
location: region:719971-751488:-1
so has part: feature:719971-751488:-1:exon
subclass of: SO_0000010

121302673
type: Gene
SIO_000068: ncbigene

position:719971:-1
position: 719971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751488:-1
position: 751488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719971-751488:-1:exon

sacs
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: sacs
product: sacsin molecular chaperone
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041232726.1
SIO_010081: sacs
subclass of: SO_0000673
so part of: sacs
location: complement(join(719971..733277,738528..738619,739214..740696,740820..740966,741385..741496,742705..742790,743157..743247,746938..747088,749478..749954,750783..751488))
location: region:719971-751488:-1
so has part: feature:750783-751488:-1:exon
so has part: feature:749478-749954:-1:exon
so has part: feature:746938-747088:-1:exon
so has part: feature:743157-743247:-1:exon
so has part: feature:742705-742790:-1:exon
so has part: feature:741385-741496:-1:exon
so has part: feature:740820-740966:-1:exon
so has part: feature:739214-740696:-1:exon
so has part: feature:738528-738619:-1:exon
so has part: feature:719971-733277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:750783-751488:-1:exon

position:750783:-1
position: 750783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:749478-749954:-1:exon

position:749478:-1
position: 749478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749954:-1
position: 749954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:746938-747088:-1:exon

position:746938:-1
position: 746938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747088:-1
position: 747088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:743157-743247:-1:exon

position:743157:-1
position: 743157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743247:-1
position: 743247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:742705-742790:-1:exon

position:742705:-1
position: 742705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742790:-1
position: 742790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:741385-741496:-1:exon

position:741385:-1
position: 741385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741496:-1
position: 741496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:740820-740966:-1:exon

position:740820:-1
position: 740820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740966:-1
position: 740966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:739214-740696:-1:exon

position:739214:-1
position: 739214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740696:-1
position: 740696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:738528-738619:-1:exon

position:738528:-1
position: 738528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738619:-1
position: 738619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:719971-733277:-1:exon

position:733277:-1
position: 733277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sacs
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: sacs
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sacsin
translation: MAATEGVRLSRVTVLHEYVGNRVFEVPTSAAVRDIKHLICAETDFPVSEQKLLHNGRELPDRTEIRKLLPAGIHDIFMTLQGMGLKGGGRFGQTTPPLVEFLKDILRRYPEGGQILKELIQNAEDAGASEVKFMYDETEYGRESVWSDDMGQYQGSALYAFNNAVFTTEDWNGIQEIARSRKREDPLKVGRFGIGFNSVYHITDVPSIYSGDQIGILDPHQTLFGRHESGQCWNLKEDVKEISEHADQFAPYVGIFGSSENTIKEGTFPGTLFRFPLRVKPSQLSSNIYNKEKVLELFESFKADADTVLLFLKSVQKVSLHVRESDGTERMLFRVTAIENQELKLERPNSLKTLGLAIDRYNNGVPSNSVVCATYQVNIVAEDETAKETQKTSWLVCNSVGGRGMCSELDCLADDLKFIPTIGIAMPLLVMDEDEGAAQGFSGRAFCFLPLPPGEESMTGLSVHISGFFGLTDNRRSIKWREVDQWRDPAALWNELLIAKVVPRTYSMLLLESIKRVQTAKDQDFPLSAEGVYRAWPDLRQIRDRWKPILEPLFKDLLQQAVILSIDQCWLKVDTVVFTELDNTIEHTETVISYLQSSGMQVAKVPANVAMALNSYFPDPKAVKKVTPALVRQVLRKSRHKGAAQEKLHLLEFILSDDSYSELIGLELLPLQNGTFVAFSSSIADKDAVYIFSDDCPRSLFPGLEGRFLSENIKASVLTALKEAAKSRGRPCTQLQLLTPERSARLIKEILTAAWPVRDMAVQWFPGNQEKKHPPISWLKLVWKYLYINFPEDLGIFEDMPLIPSVPLEDNLNVLELLRLRTPSPIILEHEEESALPESLPEIIVKLGGFVIKELDPSLQHPLLKKYTHPPSPSSVLQIMDRASTQKVASQVSTFSPKQKVALRSFLAGLPDVSEKERRILQDLMIFQKLGPSSEKNEAVFAVLRGSKALHHTAKLPPNTRLSITVIDNVDEATIRLVRMLSLEQLKSTDCLKVIIQDIEKGFYSKEETATIMFWVLKHLLFLKNENPLVLEWLTSLKFIQISQGKLVAATELFDPDIEILQSLFYSDEKARFPPITFTASPDLLHSLRQLGLKNEGQLSEKDILQVAKKIEELQSSSKCEQDLLLIKAKTLLGVLNKQTKLVKSAEAQVTLQKLKWVPVCKGRPLNYPHSLAWKGDALNLCSLNNMCEVAHAVLVGSSVALVEHISAGMKKALKLSIEPQVDQVLQHLKAVIDWHRSQAFTTEDWYQFQQILLEIYDFIQDHLDSAGEALKAQTSAWVWTGKTFSLPMQAVLKSIPDLDLQPYLYSLPKTMAKFHKLFRFCGSVEQVLPSHVFEVNNIIKERCEQGMTQEESKQNLLLLLSILRWMHSSQISVDLDTPVPILYNKDPSRLVMRPIHECSYCDIKVDDLNDLLDDASEPIILVHDDIPMKTAEWLKVPCLSTRLINPENLGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDATATECSFLIDMRKNLDIRENLLDPGMSVCHGPTLWSFNNSVFSDTDFMNITRLGGSMKRCEVDKVGKFGLGFNSVYHVTDIPIIMSREFMIMFDPNINHLSKHIRDKSSPGIKINWSKQQKRLRKFPNQFKPFINVFNCQLPLSLERPYKYNGTLFRLPFRTEQEAAVSEISGIYYNTTDIYSLVDEFSMCGHRLILFTQHVDSMVLKYLKSEEPNPATSQDVVTIKKTVCSSKAMYGPVSILKAAAKVMKRVASTNRVPSDIPKSSCIIRIVVEEFHHVFRRIIDLQSPLFRGPDDDPASYFEMAAKGSQGKRGSDDVPQKSIDLTSWLISSCMDFGEALKFSLNESGRRLGLVPCGGVAVLLSETENNTWTVKINTNPIGEVFCYLPLRIKTGLPVHINGCFAVTSNRKEIWKTDSKGRWNSVFMRHVIVQAYLEAMSVLRAMSVNGELVNYNYYATWPDPSVVHDDFALICQGVYQEIAKGGDKEVAKVFSNGKAWVSINYVRFLDDS…
SIO_010081: sacs
subclass of: SO_0000673
so part of: sacs
location: complement(join(721717..733277,738528..738619,739214..740696,740820..740966,741385..741496,742705..742790,743157..743247,746938..747088,749478..749500))
location: region:721717-749500:-1
so has part: feature:749478-749500:-1:exon
so has part: feature:746938-747088:-1:exon
so has part: feature:743157-743247:-1:exon
so has part: feature:742705-742790:-1:exon
so has part: feature:741385-741496:-1:exon
so has part: feature:740820-740966:-1:exon
so has part: feature:739214-740696:-1:exon
so has part: feature:738528-738619:-1:exon
so has part: feature:721717-733277:-1:exon

XP_041088660.1
type: Protein
SIO_000068: ncbiprotein

position:721717:-1
position: 721717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749500:-1
position: 749500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749478-749500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:746938-747088:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743157-743247:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:742705-742790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741385-741496:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740820-740966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739214-740696:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:738528-738619:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:721717-733277:-1:exon

LOC121302844
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302844
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 759269..781705
location: region:759269-781705:1
so has part: feature:759269-781705:1:exon
subclass of: SO_0000010

121302844
type: Gene
SIO_000068: ncbigene

position:759269:1
position: 759269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781705:1
position: 781705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759269-781705:1:exon

LOC121302844
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302844
product: tumor necrosis factor receptor superfamily member 19-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041233120.1
SIO_010081: LOC121302844
subclass of: SO_0000673
so part of: LOC121302844
location: join(759269..759782,763002..763096,763594..763704,770802..770980,771586..771671,776337..776507,777083..777208,778314..778416,778948..779201,780811..781705)
location: region:759269-781705:1
so has part: feature:759269-759782:1:exon
so has part: feature:763002-763096:1:exon
so has part: feature:763594-763704:1:exon
so has part: feature:770802-770980:1:exon
so has part: feature:771586-771671:1:exon
so has part: feature:776337-776507:1:exon
so has part: feature:777083-777208:1:exon
so has part: feature:778314-778416:1:exon
so has part: feature:778948-779201:1:exon
so has part: feature:780811-781705:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:759269-759782:1:exon

position:759782:1
position: 759782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:763002-763096:1:exon

position:763002:1
position: 763002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763096:1
position: 763096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:763594-763704:1:exon

position:763594:1
position: 763594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763704:1
position: 763704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:770802-770980:1:exon

position:770802:1
position: 770802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770980:1
position: 770980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:771586-771671:1:exon

position:771586:1
position: 771586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771671:1
position: 771671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:776337-776507:1:exon

position:776337:1
position: 776337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776507:1
position: 776507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:777083-777208:1:exon

position:777083:1
position: 777083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777208:1
position: 777208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:778314-778416:1:exon

position:778314:1
position: 778314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778416:1
position: 778416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:778948-779201:1:exon

position:778948:1
position: 778948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779201:1
position: 779201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:780811-781705:1:exon

position:780811:1
position: 780811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121302844
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302844
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 19-like
translation: MFKLVLIWTCLVVAEAGEVSGCRELEFRDRNGNCIVCRQCGPGQELSKECGFGYGEDARCAPCRPNRFKEDSGMQKCKPCLDCALVNRFQKANCTATSNAMCGDCLPGFYRKTKLSGFQDMECIPCGDPAPPYELLCLGSNRVNLVKIPSTVSSPRDTALAAVICSALTTVLLALLILCIIYCKRQLIDKKPSWSVRSQEAPCNGSELLHFNRHGMNACAHRACCHCHPNPAQTCGPVHLIPSLCCDETCSLEHNSEGCPFHSQNTLDEGNMDPVEAWPLMQHSASSESLSLCQSSLESGAEGAGPPAQPAPSESTESCPAHLESREGCGASRSTESLAHETSHQPCQQH
SIO_010081: LOC121302844
subclass of: SO_0000673
so part of: LOC121302844
location: join(763064..763096,763594..763704,770802..770980,771586..771671,776337..776507,777083..777208,778314..778416,778948..779191)
location: region:763064-779191:1
so has part: feature:763064-763096:1:exon
so has part: feature:763594-763704:1:exon
so has part: feature:770802-770980:1:exon
so has part: feature:771586-771671:1:exon
so has part: feature:776337-776507:1:exon
so has part: feature:777083-777208:1:exon
so has part: feature:778314-778416:1:exon
so has part: feature:778948-779191:1:exon

XP_041089054.1
type: Protein
SIO_000068: ncbiprotein

position:763064:1
position: 763064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779191:1
position: 779191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:763064-763096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:763594-763704:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:770802-770980:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:771586-771671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:776337-776507:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:777083-777208:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:778314-778416:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:778948-779191:1:exon

mipepa
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: mipepa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(785397..829396)
location: region:785397-829396:-1
so has part: feature:785397-829396:-1:exon
subclass of: SO_0000010

121302843
type: Gene
SIO_000068: ncbigene

position:785397:-1
position: 785397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829396:-1
position: 829396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785397-829396:-1:exon

mipepa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: mipepa
product: mitochondrial intermediate peptidase a, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_041233119.1
SIO_010081: mipepa
subclass of: SO_0000673
so part of: mipepa
location: complement(join(785397..788677,811553..811672,813422..813496,815295..815404,816156..816360,817145..817222,818417..818570,823001..823053,823561..823621,824544..824592,824688..824844,825878..826060,826292..826355,827056..827142,827392..827480,828127..828300,828748..829396))
location: region:785397-829396:-1
so has part: feature:828748-829396:-1:exon
so has part: feature:828127-828300:-1:exon
so has part: feature:827392-827480:-1:exon
so has part: feature:827056-827142:-1:exon
so has part: feature:826292-826355:-1:exon
so has part: feature:825878-826060:-1:exon
so has part: feature:824688-824844:-1:exon
so has part: feature:824544-824592:-1:exon
so has part: feature:823561-823621:-1:exon
so has part: feature:823001-823053:-1:exon
so has part: feature:818417-818570:-1:exon
so has part: feature:817145-817222:-1:exon
so has part: feature:816156-816360:-1:exon
so has part: feature:815295-815404:-1:exon
so has part: feature:813422-813496:-1:exon
so has part: feature:811553-811672:-1:exon
so has part: feature:785397-788677:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:828748-829396:-1:exon

position:828748:-1
position: 828748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:828127-828300:-1:exon

position:828127:-1
position: 828127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828300:-1
position: 828300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:827392-827480:-1:exon

position:827392:-1
position: 827392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827480:-1
position: 827480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:827056-827142:-1:exon

position:827056:-1
position: 827056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827142:-1
position: 827142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:826292-826355:-1:exon

position:826292:-1
position: 826292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826355:-1
position: 826355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:825878-826060:-1:exon

position:825878:-1
position: 825878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826060:-1
position: 826060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:824688-824844:-1:exon

position:824688:-1
position: 824688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824844:-1
position: 824844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:824544-824592:-1:exon

position:824544:-1
position: 824544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824592:-1
position: 824592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:823561-823621:-1:exon

position:823561:-1
position: 823561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823621:-1
position: 823621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:823001-823053:-1:exon

position:823001:-1
position: 823001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823053:-1
position: 823053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:818417-818570:-1:exon

position:818417:-1
position: 818417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818570:-1
position: 818570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:817145-817222:-1:exon

position:817145:-1
position: 817145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817222:-1
position: 817222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:816156-816360:-1:exon

position:816156:-1
position: 816156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816360:-1
position: 816360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:815295-815404:-1:exon

position:815295:-1
position: 815295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815404:-1
position: 815404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:813422-813496:-1:exon

position:813422:-1
position: 813422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813496:-1
position: 813496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:811553-811672:-1:exon

position:811553:-1
position: 811553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811672:-1
position: 811672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:785397-788677:-1:exon

position:788677:-1
position: 788677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mipepa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: mipepa
product: mitochondrial intermediate peptidase a, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041233118.1
SIO_010081: mipepa
subclass of: SO_0000673
so part of: mipepa
location: complement(join(785397..788677,796149..796222,798041..798162,811553..811672,813422..813496,815295..815404,816156..816360,817145..817222,818417..818570,823001..823053,823561..823621,824544..824592,824688..824844,825878..826060,826292..826355,827056..827142,827392..827480,828127..828300,828748..829396))
location: region:785397-829396:-1
so has part: feature:828748-829396:-1:exon
so has part: feature:828127-828300:-1:exon
so has part: feature:827392-827480:-1:exon
so has part: feature:827056-827142:-1:exon
so has part: feature:826292-826355:-1:exon
so has part: feature:825878-826060:-1:exon
so has part: feature:824688-824844:-1:exon
so has part: feature:824544-824592:-1:exon
so has part: feature:823561-823621:-1:exon
so has part: feature:823001-823053:-1:exon
so has part: feature:818417-818570:-1:exon
so has part: feature:817145-817222:-1:exon
so has part: feature:816156-816360:-1:exon
so has part: feature:815295-815404:-1:exon
so has part: feature:813422-813496:-1:exon
so has part: feature:811553-811672:-1:exon
so has part: feature:798041-798162:-1:exon
so has part: feature:796149-796222:-1:exon
so has part: feature:785397-788677:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:828748-829396:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:828127-828300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:827392-827480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:827056-827142:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826292-826355:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:825878-826060:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:824688-824844:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:824544-824592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:823561-823621:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:823001-823053:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818417-818570:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:817145-817222:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:816156-816360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:815295-815404:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:813422-813496:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:811553-811672:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:798041-798162:-1:exon

position:798041:-1
position: 798041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798162:-1
position: 798162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:796149-796222:-1:exon

position:796149:-1
position: 796149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796222:-1
position: 796222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:785397-788677:-1:exon

mipepa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: mipepa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial intermediate peptidase isoform X2
translation: MIASRRFVFTLKHFRLKALCRNVTTSWSQVGAAFNARQHRKLDLLGRNVGLFRVPELTSPAGFEKAQQKALEETELLVQRACTISPGQQTVQTFDQLSDSLCRVADLADFVKVAHPDPAFREAAEKTCIAIGTAVEKLNTNVDLFKSLKDLLDNKGVMDSLDPETRRVAELFMFDFEISGIHLDKDKRKRAVNLNVKLLDLNNEFLVGSHLLNRIDKKALPDHIHHCFALDGNYIQIGGLHADTPDDLVREAAYKIFLYPNPEQLSCLDELLRCRNELAQLVGYRSFAHRALQGTMAKTPETVMEFLELLSEKLTDRAAKDFGMMRDMKMKLNPENAELMPWDHPYYSGVLRAERYNIEPSLYSPFFSLGACMEGLNMLFSQLLGVSFQAEQPERGEVWCEDVRKLAVVHESEGLLGYIYCDFFHRLDKPHQDCHFTIRGGRLKEDGEYQLPVVVLMLSLPHPTKNCPTLLTPGMMENLFHEMGHAMHSMLGRTRYQHVTGTRCPTDFAEVPSILMEYFASDYRVVNQFARHYKTGQPLPKSMVSRLCESKKVCAAADTQLQVFYAVLDQIYHGQPRPSKSTTQILQETQAQFYGLPSVPNTACSRRSPRLPNLWMPWCRIWTLILKASSWIPSEWISTHSCPPYQVKS
SIO_010081: mipepa
subclass of: SO_0000673
so part of: mipepa
location: complement(join(788534..788677,811553..811672,813422..813496,815295..815404,816156..816360,817145..817222,818417..818570,823001..823053,823561..823621,824544..824592,824688..824844,825878..826060,826292..826355,827056..827142,827392..827480,828127..828300,828748..828894))
location: region:788534-828894:-1
so has part: feature:828748-828894:-1:exon
so has part: feature:828127-828300:-1:exon
so has part: feature:827392-827480:-1:exon
so has part: feature:827056-827142:-1:exon
so has part: feature:826292-826355:-1:exon
so has part: feature:825878-826060:-1:exon
so has part: feature:824688-824844:-1:exon
so has part: feature:824544-824592:-1:exon
so has part: feature:823561-823621:-1:exon
so has part: feature:823001-823053:-1:exon
so has part: feature:818417-818570:-1:exon
so has part: feature:817145-817222:-1:exon
so has part: feature:816156-816360:-1:exon
so has part: feature:815295-815404:-1:exon
so has part: feature:813422-813496:-1:exon
so has part: feature:811553-811672:-1:exon
so has part: feature:788534-788677:-1:exon

XP_041089053.1
type: Protein
SIO_000068: ncbiprotein

position:788534:-1
position: 788534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828894:-1
position: 828894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:828748-828894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:828127-828300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:827392-827480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:827056-827142:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826292-826355:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:825878-826060:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:824688-824844:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:824544-824592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:823561-823621:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:823001-823053:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818417-818570:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:817145-817222:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:816156-816360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:815295-815404:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:813422-813496:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:811553-811672:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:788534-788677:-1:exon

mipepa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: mipepa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial intermediate peptidase isoform X1
translation: MIASRRFVFTLKHFRLKALCRNVTTSWSQVGAAFNARQHRKLDLLGRNVGLFRVPELTSPAGFEKAQQKALEETELLVQRACTISPGQQTVQTFDQLSDSLCRVADLADFVKVAHPDPAFREAAEKTCIAIGTAVEKLNTNVDLFKSLKDLLDNKGVMDSLDPETRRVAELFMFDFEISGIHLDKDKRKRAVNLNVKLLDLNNEFLVGSHLLNRIDKKALPDHIHHCFALDGNYIQIGGLHADTPDDLVREAAYKIFLYPNPEQLSCLDELLRCRNELAQLVGYRSFAHRALQGTMAKTPETVMEFLELLSEKLTDRAAKDFGMMRDMKMKLNPENAELMPWDHPYYSGVLRAERYNIEPSLYSPFFSLGACMEGLNMLFSQLLGVSFQAEQPERGEVWCEDVRKLAVVHESEGLLGYIYCDFFHRLDKPHQDCHFTIRGGRLKEDGEYQLPVVVLMLSLPHPTKNCPTLLTPGMMENLFHEMGHAMHSMLGRTRYQHVTGTRCPTDFAEVPSILMEYFASDYRVVNQFARHYKTGQPLPKSMVSRLCESKKVCAAADTQLQVFYAVLDQIYHGQPRPSKSTTQILQETQAQFYGLPSVPNTAWQLRFSHLIGYGAKYYSYLMSRAVASMVWKESFMKDPFDRVMGERYRSEMLAHGGGKEPMLMVKGMLQKIPSTAEFVDALVSDLDPDFESFLMDSE
SIO_010081: mipepa
subclass of: SO_0000673
so part of: mipepa
location: complement(join(788580..788677,796149..796222,798041..798162,811553..811672,813422..813496,815295..815404,816156..816360,817145..817222,818417..818570,823001..823053,823561..823621,824544..824592,824688..824844,825878..826060,826292..826355,827056..827142,827392..827480,828127..828300,828748..828894))
location: region:788580-828894:-1
so has part: feature:828748-828894:-1:exon
so has part: feature:828127-828300:-1:exon
so has part: feature:827392-827480:-1:exon
so has part: feature:827056-827142:-1:exon
so has part: feature:826292-826355:-1:exon
so has part: feature:825878-826060:-1:exon
so has part: feature:824688-824844:-1:exon
so has part: feature:824544-824592:-1:exon
so has part: feature:823561-823621:-1:exon
so has part: feature:823001-823053:-1:exon
so has part: feature:818417-818570:-1:exon
so has part: feature:817145-817222:-1:exon
so has part: feature:816156-816360:-1:exon
so has part: feature:815295-815404:-1:exon
so has part: feature:813422-813496:-1:exon
so has part: feature:811553-811672:-1:exon
so has part: feature:798041-798162:-1:exon
so has part: feature:796149-796222:-1:exon
so has part: feature:788580-788677:-1:exon

XP_041089052.1
type: Protein
SIO_000068: ncbiprotein

position:788580:-1
position: 788580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:828748-828894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:828127-828300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:827392-827480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:827056-827142:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826292-826355:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:825878-826060:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:824688-824844:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:824544-824592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:823561-823621:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:823001-823053:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818417-818570:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:817145-817222:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:816156-816360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:815295-815404:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:813422-813496:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:811553-811672:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:798041-798162:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:796149-796222:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:788580-788677:-1:exon

LOC121302575
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(829117..902472)
location: region:829117-902472:-1
so has part: feature:829117-902472:-1:exon
subclass of: SO_0000010

121302575
type: Gene
SIO_000068: ncbigene

position:829117:-1
position: 829117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902472:-1
position: 902472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829117-902472:-1:exon

LOC121302575
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302575
product: uncharacterized LOC121302575
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041232576.1
SIO_010081: LOC121302575
subclass of: SO_0000673
so part of: LOC121302575
location: complement(join(829117..829130,833153..833264,834149..834328,836279..836467,837122..837301,838599..838735,844220..844364,845858..846214,851025..852950,892443..892478,902198..902472))
location: region:829117-902472:-1
so has part: feature:902198-902472:-1:exon
so has part: feature:892443-892478:-1:exon
so has part: feature:851025-852950:-1:exon
so has part: feature:845858-846214:-1:exon
so has part: feature:844220-844364:-1:exon
so has part: feature:838599-838735:-1:exon
so has part: feature:837122-837301:-1:exon
so has part: feature:836279-836467:-1:exon
so has part: feature:834149-834328:-1:exon
so has part: feature:833153-833264:-1:exon
so has part: feature:829117-829130:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:902198-902472:-1:exon

position:902198:-1
position: 902198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:892443-892478:-1:exon

position:892443:-1
position: 892443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892478:-1
position: 892478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:851025-852950:-1:exon

position:851025:-1
position: 851025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852950:-1
position: 852950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:845858-846214:-1:exon

position:845858:-1
position: 845858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846214:-1
position: 846214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:844220-844364:-1:exon

position:844220:-1
position: 844220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844364:-1
position: 844364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:838599-838735:-1:exon

position:838599:-1
position: 838599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838735:-1
position: 838735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:837122-837301:-1:exon

position:837122:-1
position: 837122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837301:-1
position: 837301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:836279-836467:-1:exon

position:836279:-1
position: 836279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836467:-1
position: 836467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:834149-834328:-1:exon

position:834149:-1
position: 834149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834328:-1
position: 834328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:833153-833264:-1:exon

position:833153:-1
position: 833153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833264:-1
position: 833264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:829117-829130:-1:exon

position:829130:-1
position: 829130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121302575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121302575
translation: MLRKRFSLRSASAPNLAVQSAEDLTPYSTCETERRGGAVEEVLEPGSTDEDSSPDPSKKTVCLHSTSNGSSMTSFPRGCSNSSAETALATVDVKPRTLNELNSQNGMVDSVHCSEMDGQEDKLSPSKIMRFFSTPRKRSSSSAERPRSVIMPGSSPTWNALSSLRKMGSFKKLKSSVFQGIQARENPELVNEEGLGNGLSKRVPNGVCVRGQNNRLLHSSALQDFKGSGDGLTSDGSDVEERDDSFQRTTHRSRSIRRAYGVGRINLLENCKGESHSNCTRPLSPVIQEPRGCPLSDMDSSKVVYRRSKSIDNLNFLKKSSFKRKSTSNLADPKPANESQRIGRAASTSSMDSDKILGVERRSKRWKSPIRAKDFDRVLRLVSGVTDAARRKESPPPPSEPASRTRPNSRLHDDYSRRVSSSSENERRRGLSPAKTPLKPPAHAEPCILSDTVDTQSPPLVPDAKSNRTPSCLSPDITSPLSPLSPSSSNNEVFYSEPPVLSNTVDAQSPPLVPDAKSSTAPSCLSPDITSPLSPLSPSSTNNEVFYSDCEPESASQFAFDAELPSTPVRPTAPKPQSPSTEKLKGNTPFHCPNRHSTLSLNSMDSEGQAPRAGKSPVCFQELVETVYYDEANEDSGISSHSQQSLNTAPGVEEKSEEVCTEEQWRGSLAHEEEKPDWHKLAHRRGSAGKGRSRQRPLSDYGQLANRKFSIPEHSVAVESQDMECTEGEEQTVLSHPHTTTAGGQHRSRKHRPISVIGVSFYSSPKAEEIEDLLLAQPLPRPPVPSHQVPPYKAVSARFRPFTFSQSTPIGLDRVGRRRQMRASNIAADGGSESSALVDDNGSEEDYSFEELCQANPRYLQPGGEQLAINELIGDGSTVYAEALWDHVTMDDQELTFKAGDVIRVLDAANKDWWWGMIEDKEAWFPASFVRLRVNQEDCVAGSVESTQDEEQDPSSSKPRHKSSENKDQMRTNVIKEIMNTERVYIKHLRDICEGYIRQCKKHTGMFTEAQLGTIFGNIEEIYKFQRKFLKDLEKQYNKEEAHLSEIGSCFLQHQEGFAIYSEYCNNHPSACAELSMLMKHSRYRHFFEACQSED
SIO_010081: LOC121302575
subclass of: SO_0000673
so part of: LOC121302575
location: complement(join(829117..829130,833153..833264,834149..834328,836279..836467,837122..837301,838599..838735,844220..844364,845858..846214,851025..852950,892443..892478,902198..902209))
location: region:829117-902209:-1
so has part: feature:902198-902209:-1:exon
so has part: feature:892443-892478:-1:exon
so has part: feature:851025-852950:-1:exon
so has part: feature:845858-846214:-1:exon
so has part: feature:844220-844364:-1:exon
so has part: feature:838599-838735:-1:exon
so has part: feature:837122-837301:-1:exon
so has part: feature:836279-836467:-1:exon
so has part: feature:834149-834328:-1:exon
so has part: feature:833153-833264:-1:exon
so has part: feature:829117-829130:-1:exon

XP_041088510.1
type: Protein
SIO_000068: ncbiprotein

position:902209:-1
position: 902209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902198-902209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892443-892478:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:851025-852950:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:845858-846214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:844220-844364:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:838599-838735:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:837122-837301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:836279-836467:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:834149-834328:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:833153-833264:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829117-829130:-1:exon

mtmr6
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: mtmr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(908694..926324)
location: region:908694-926324:-1
so has part: feature:908694-926324:-1:exon
subclass of: SO_0000010

121302887
type: Gene
SIO_000068: ncbigene

position:908694:-1
position: 908694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926324:-1
position: 926324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:908694-926324:-1:exon

mtmr6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: mtmr6
product: myotubularin related protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041233190.1
SIO_010081: mtmr6
subclass of: SO_0000673
so part of: mtmr6
location: complement(join(908694..909277,910689..910815,912297..912431,913992..914192,915229..915278,916391..916516,917329..917438,918768..918900,919273..919407,919773..919901,920700..920857,921839..922001,924511..924630,926127..926324))
location: region:908694-926324:-1
so has part: feature:926127-926324:-1:exon
so has part: feature:924511-924630:-1:exon
so has part: feature:921839-922001:-1:exon
so has part: feature:920700-920857:-1:exon
so has part: feature:919773-919901:-1:exon
so has part: feature:919273-919407:-1:exon
so has part: feature:918768-918900:-1:exon
so has part: feature:917329-917438:-1:exon
so has part: feature:916391-916516:-1:exon
so has part: feature:915229-915278:-1:exon
so has part: feature:913992-914192:-1:exon
so has part: feature:912297-912431:-1:exon
so has part: feature:910689-910815:-1:exon
so has part: feature:908694-909277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:926127-926324:-1:exon

position:926127:-1
position: 926127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:924511-924630:-1:exon

position:924511:-1
position: 924511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:924630:-1
position: 924630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:921839-922001:-1:exon

position:921839:-1
position: 921839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922001:-1
position: 922001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:920700-920857:-1:exon

position:920700:-1
position: 920700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:920857:-1
position: 920857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:919773-919901:-1:exon

position:919773:-1
position: 919773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919901:-1
position: 919901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:919273-919407:-1:exon

position:919273:-1
position: 919273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919407:-1
position: 919407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:918768-918900:-1:exon

position:918768:-1
position: 918768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918900:-1
position: 918900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:917329-917438:-1:exon

position:917329:-1
position: 917329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917438:-1
position: 917438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:916391-916516:-1:exon

position:916391:-1
position: 916391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916516:-1
position: 916516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:915229-915278:-1:exon

position:915229:-1
position: 915229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915278:-1
position: 915278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:913992-914192:-1:exon

position:913992:-1
position: 913992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:914192:-1
position: 914192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:912297-912431:-1:exon

position:912297:-1
position: 912297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912431:-1
position: 912431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:910689-910815:-1:exon

position:910689:-1
position: 910689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910815:-1
position: 910815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:908694-909277:-1:exon

position:909277:-1
position: 909277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mtmr6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: mtmr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 6
translation: MEHITTPKVEQVKLLDRFSNRATAGTLHLTATHLLFVESNTAASQETWILHHHIAVVEKLSLTTSGCPLVIHCRNFRVVHFVIPRERDCHDIYSSLLLLRRPGSFDDLYAFSYNPKQSEQERAGGWQLIDLASEYERMGVPCDHWQMTDVNRNYKVCDTYPRDLFVPVSASKPIIVGSSKFRSKGRFPVLSYFYQEKKAAVCRCSQPLSGFSARCLEDEHMLQAISKANHNSRFMYVMDTRPKLNALANRAAGKGYENEDNYSNIRFQFVGIENIHVMRASLQKLLEVIGTKSLSMTDYFSGLESSGWLRHIKAILDAAIILAKAVTVEGASVLVHCSDGWDRTAQVCSLGALLMDPFYRTIKGLMVLIEKDWISFGHKFADRCDQLDGDPKEVSPVFTQFLECVWQLTEQFPQAFQYNEWFLIQIHEHVHSCQFGNFLGNCQREREELRLKDKTYSLWPFLLNDQENYVNPVYQPGFSETHPVLEPNTLPFNFKFWRNMYHQFDRSMHPRQSVLKQVLSLRASNRDLEKKTRALEAKLQKQGVFLSHAARPKSLILSAPLNYKEDEQKLSVCDRVRTVEGSSSAENGYNEEEEEPASFTKPEPTLVSLERGVARMTC
SIO_010081: mtmr6
subclass of: SO_0000673
so part of: mtmr6
location: complement(join(909032..909277,910689..910815,912297..912431,913992..914192,915229..915278,916391..916516,917329..917438,918768..918900,919273..919407,919773..919901,920700..920857,921839..922001,924511..924630,926127..926150))
location: region:909032-926150:-1
so has part: feature:926127-926150:-1:exon
so has part: feature:924511-924630:-1:exon
so has part: feature:921839-922001:-1:exon
so has part: feature:920700-920857:-1:exon
so has part: feature:919773-919901:-1:exon
so has part: feature:919273-919407:-1:exon
so has part: feature:918768-918900:-1:exon
so has part: feature:917329-917438:-1:exon
so has part: feature:916391-916516:-1:exon
so has part: feature:915229-915278:-1:exon
so has part: feature:913992-914192:-1:exon
so has part: feature:912297-912431:-1:exon
so has part: feature:910689-910815:-1:exon
so has part: feature:909032-909277:-1:exon

XP_041089124.1
type: Protein
SIO_000068: ncbiprotein

position:909032:-1
position: 909032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926150:-1
position: 926150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926127-926150:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:924511-924630:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:921839-922001:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:920700-920857:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:919773-919901:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:919273-919407:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:918768-918900:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:917329-917438:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:916391-916516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:915229-915278:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:913992-914192:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:912297-912431:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:910689-910815:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:909032-909277:-1:exon

nup58
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: nup58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 926670..933303
location: region:926670-933303:1
so has part: feature:926670-933303:1:exon
subclass of: SO_0000010

121302650
type: Gene
SIO_000068: ncbigene

position:926670:1
position: 926670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933303:1
position: 933303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926670-933303:1:exon

nup58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: nup58
product: nucleoporin 58
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041232674.1
SIO_010081: nup58
subclass of: SO_0000673
so part of: nup58
location: join(926670..927221,929694..929854,929951..929989,930166..930309,930899..931018,931288..931443,931875..931902,932395..932460,932808..932982,933198..933303)
location: region:926670-933303:1
so has part: feature:926670-927221:1:exon
so has part: feature:929694-929854:1:exon
so has part: feature:929951-929989:1:exon
so has part: feature:930166-930309:1:exon
so has part: feature:930899-931018:1:exon
so has part: feature:931288-931443:1:exon
so has part: feature:931875-931902:1:exon
so has part: feature:932395-932460:1:exon
so has part: feature:932808-932982:1:exon
so has part: feature:933198-933303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:926670-927221:1:exon

position:927221:1
position: 927221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:929694-929854:1:exon

position:929694:1
position: 929694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929854:1
position: 929854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:929951-929989:1:exon

position:929951:1
position: 929951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929989:1
position: 929989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:930166-930309:1:exon

position:930166:1
position: 930166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930309:1
position: 930309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:930899-931018:1:exon

position:930899:1
position: 930899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:931018:1
position: 931018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:931288-931443:1:exon

position:931288:1
position: 931288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:931443:1
position: 931443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:931875-931902:1:exon

position:931875:1
position: 931875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:931902:1
position: 931902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:932395-932460:1:exon

position:932395:1
position: 932395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932460:1
position: 932460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:932808-932982:1:exon

position:932808:1
position: 932808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932982:1
position: 932982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:933198-933303:1:exon

position:933198:1
position: 933198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nup58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: nup58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin p58/p45
translation: MSGFNFGAGAGGLTSTGTTAGGFGAFGAAAGASSNPAGTGSFTLGNMASVAPTIGAGTTTTSSLGLGGGLFGQTKPATGFSFGGAPTGTAATSTVTGLALGAPATTSAAATGFSLGFSKPAASSGPFSLPATGGGLSLGSALTSAMPAGSTGFALSLGSTPAASTALTGLSLGSTGLGSSLFASSAATGLGQGLGHGFGQGLGQSSLGLGSTLGMSTAAPTATTSQGLGGVDFTSSSEKKSDKSSGARPEDSKALKDENLPPVISQDVDNFQKFVKEQKQVQEEISRMSSKAMQKVQDDIKSLKQLLSVSASGLQRNSQAIDKLKIETAQELKNAEISLRTQKIPPGLQHENTAPSE
SIO_010081: nup58
subclass of: SO_0000673
so part of: nup58
location: join(927121..927221,929694..929854,929951..929989,930166..930309,930899..931018,931288..931443,931875..931902,932395..932460,932808..932982,933198..933281)
location: region:927121-933281:1
so has part: feature:927121-927221:1:exon
so has part: feature:929694-929854:1:exon
so has part: feature:929951-929989:1:exon
so has part: feature:930166-930309:1:exon
so has part: feature:930899-931018:1:exon
so has part: feature:931288-931443:1:exon
so has part: feature:931875-931902:1:exon
so has part: feature:932395-932460:1:exon
so has part: feature:932808-932982:1:exon
so has part: feature:933198-933281:1:exon

XP_041088608.1
type: Protein
SIO_000068: ncbiprotein

position:927121:1
position: 927121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933281:1
position: 933281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927121-927221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:929694-929854:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:929951-929989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:930166-930309:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:930899-931018:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:931288-931443:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:931875-931902:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:932395-932460:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:932808-932982:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:933198-933281:1:exon

LOC121302757
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(939685..980113)
location: region:939685-980113:-1
so has part: feature:939685-980113:-1:exon
subclass of: SO_0000010

121302757
type: Gene
SIO_000068: ncbigene

position:939685:-1
position: 939685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980113:-1
position: 980113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:939685-980113:-1:exon

LOC121302757
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302757
product: phospholipid-transporting ATPase IB-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_041232925.1
SIO_010081: LOC121302757
subclass of: SO_0000673
so part of: LOC121302757
location: complement(join(939685..940688,943826..943917,952368..952472,952927..953015,970192..970299,973437..973493,974000..974061,976439..976517,977841..977963,979967..980113))
location: region:939685-980113:-1
so has part: feature:979967-980113:-1:exon
so has part: feature:977841-977963:-1:exon
so has part: feature:976439-976517:-1:exon
so has part: feature:974000-974061:-1:exon
so has part: feature:973437-973493:-1:exon
so has part: feature:970192-970299:-1:exon
so has part: feature:952927-953015:-1:exon
so has part: feature:952368-952472:-1:exon
so has part: feature:943826-943917:-1:exon
so has part: feature:939685-940688:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:979967-980113:-1:exon

position:979967:-1
position: 979967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:977841-977963:-1:exon

position:977841:-1
position: 977841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977963:-1
position: 977963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:976439-976517:-1:exon

position:976439:-1
position: 976439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976517:-1
position: 976517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:974000-974061:-1:exon

position:974000:-1
position: 974000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974061:-1
position: 974061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:973437-973493:-1:exon

position:973437:-1
position: 973437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973493:-1
position: 973493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:970192-970299:-1:exon

position:970192:-1
position: 970192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970299:-1
position: 970299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:952927-953015:-1:exon

position:952927:-1
position: 952927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:953015:-1
position: 953015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:952368-952472:-1:exon

position:952368:-1
position: 952368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952472:-1
position: 952472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:943826-943917:-1:exon

position:943826:-1
position: 943826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943917:-1
position: 943917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:939685-940688:-1:exon

position:940688:-1
position: 940688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121302757
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IB-like
translation: MLRFPQLYKITQNADGFNTKVFWGHCINALLHSIILFWFPLKVLDHDSVFHNGHATDYLFVGNIVYTYVVVTVCLKAGLETTAWTRFSHMAVWGSMLMWMVFFGVYSVIWPAIPIAPDMLGQAGMVMRCWSFWLGLILVPTLCLIKEVAWIAVRHTCCKSLLEEVQELEARAQDPGTAVLRDTNGRSLNEHAHLLARVFKKTPSNLAHSSSVQQTVSHGYAFSQEEDGVVSQSQVVRSYDTTRRRTEVE
SIO_010081: LOC121302757
subclass of: SO_0000673
so part of: LOC121302757
location: complement(join(940591..940688,943826..943917,952368..952472,952927..953015,970192..970299,973437..973493,974000..974061,976439..976517,977841..977900))
location: region:940591-977900:-1
so has part: feature:977841-977900:-1:exon
so has part: feature:976439-976517:-1:exon
so has part: feature:974000-974061:-1:exon
so has part: feature:973437-973493:-1:exon
so has part: feature:970192-970299:-1:exon
so has part: feature:952927-953015:-1:exon
so has part: feature:952368-952472:-1:exon
so has part: feature:943826-943917:-1:exon
so has part: feature:940591-940688:-1:exon

XP_041088859.1
type: Protein
SIO_000068: ncbiprotein

position:940591:-1
position: 940591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977900:-1
position: 977900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:977841-977900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:976439-976517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:974000-974061:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:973437-973493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:970192-970299:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:952927-953015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:952368-952472:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:943826-943917:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:940591-940688:-1:exon

LOC121302756
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1013554..1059799)
location: region:1013554-1059799:-1
so has part: feature:1013554-1059799:-1:exon
subclass of: SO_0000010

121302756
type: Gene
SIO_000068: ncbigene

position:1013554:-1
position: 1013554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059799:-1
position: 1059799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1013554-1059799:-1:exon

LOC121302756
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302756
product: phospholipid-transporting ATPase IB-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041232921.1
SIO_010081: LOC121302756
subclass of: SO_0000673
so part of: LOC121302756
location: complement(join(1013554..1014058,1016512..1016650,1019000..1019139,1019434..1019518,1020779..1020848,1020954..1021003,1021443..1021525,1022219..1022324,1023281..1023356,1025776..1025820,1026035..1026123,1026249..1026326,1027074..1027207,1028030..1028195,1028791..1028902,1029339..1029466,1030518..1030587,1032577..1032650,1034138..1034178,1034318..1034363,1034799..1034897,1036088..1036187,1044987..1045131,1051279..1051407,1059271..1059799))
location: region:1013554-1059799:-1
so has part: feature:1059271-1059799:-1:exon
so has part: feature:1051279-1051407:-1:exon
so has part: feature:1044987-1045131:-1:exon
so has part: feature:1036088-1036187:-1:exon
so has part: feature:1034799-1034897:-1:exon
so has part: feature:1034318-1034363:-1:exon
so has part: feature:1034138-1034178:-1:exon
so has part: feature:1032577-1032650:-1:exon
so has part: feature:1030518-1030587:-1:exon
so has part: feature:1029339-1029466:-1:exon
so has part: feature:1028791-1028902:-1:exon
so has part: feature:1028030-1028195:-1:exon
so has part: feature:1027074-1027207:-1:exon
so has part: feature:1026249-1026326:-1:exon
so has part: feature:1026035-1026123:-1:exon
so has part: feature:1025776-1025820:-1:exon
so has part: feature:1023281-1023356:-1:exon
so has part: feature:1022219-1022324:-1:exon
so has part: feature:1021443-1021525:-1:exon
so has part: feature:1020954-1021003:-1:exon
so has part: feature:1020779-1020848:-1:exon
so has part: feature:1019434-1019518:-1:exon
so has part: feature:1019000-1019139:-1:exon
so has part: feature:1016512-1016650:-1:exon
so has part: feature:1013554-1014058:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1059271-1059799:-1:exon

position:1059271:-1
position: 1059271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1051279-1051407:-1:exon

position:1051279:-1
position: 1051279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051407:-1
position: 1051407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1044987-1045131:-1:exon

position:1044987:-1
position: 1044987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045131:-1
position: 1045131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1036088-1036187:-1:exon

position:1036088:-1
position: 1036088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1036187:-1
position: 1036187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1034799-1034897:-1:exon

position:1034799:-1
position: 1034799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034897:-1
position: 1034897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1034318-1034363:-1:exon

position:1034318:-1
position: 1034318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034363:-1
position: 1034363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1034138-1034178:-1:exon

position:1034138:-1
position: 1034138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034178:-1
position: 1034178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1032577-1032650:-1:exon

position:1032577:-1
position: 1032577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1032650:-1
position: 1032650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1030518-1030587:-1:exon

position:1030518:-1
position: 1030518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030587:-1
position: 1030587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1029339-1029466:-1:exon

position:1029339:-1
position: 1029339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029466:-1
position: 1029466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1028791-1028902:-1:exon

position:1028791:-1
position: 1028791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028902:-1
position: 1028902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1028030-1028195:-1:exon

position:1028030:-1
position: 1028030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028195:-1
position: 1028195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1027074-1027207:-1:exon

position:1027074:-1
position: 1027074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027207:-1
position: 1027207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1026249-1026326:-1:exon

position:1026249:-1
position: 1026249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026326:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1026035-1026123:-1:exon

position:1026035:-1
position: 1026035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026123:-1
position: 1026123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1025776-1025820:-1:exon

position:1025776:-1
position: 1025776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025820:-1
position: 1025820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1023281-1023356:-1:exon

position:1023281:-1
position: 1023281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023356:-1
position: 1023356
reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1022219-1022324:-1:exon

position:1022219:-1
position: 1022219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022324:-1
position: 1022324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1021443-1021525:-1:exon

position:1021443:-1
position: 1021443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021525:-1
position: 1021525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1020954-1021003:-1:exon

position:1020954:-1
position: 1020954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021003:-1
position: 1021003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1020779-1020848:-1:exon

position:1020779:-1
position: 1020779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020848:-1
position: 1020848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1019434-1019518:-1:exon

position:1019434:-1
position: 1019434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019518:-1
position: 1019518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1019000-1019139:-1:exon

position:1019000:-1
position: 1019000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019139:-1
position: 1019139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1016512-1016650:-1:exon

position:1016512:-1
position: 1016512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016650:-1
position: 1016650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1013554-1014058:-1:exon

position:1014058:-1
position: 1014058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121302756
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302756
product: phospholipid-transporting ATPase IB-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041232923.1
SIO_010081: LOC121302756
subclass of: SO_0000673
so part of: LOC121302756
location: complement(join(1013555..1014058,1016512..1016650,1019000..1019139,1019434..1019518,1020779..1020848,1020954..1021003,1021443..1021525,1022219..1022324,1023281..1023356,1025776..1025820,1026035..1026123,1026249..1026326,1027074..1027207,1028030..1028195,1028791..1028902,1029339..1029466,1030518..1030587,1032577..1032650,1034138..1034178,1034318..1034363,1034799..1034897,1036088..1036187,1044987..1045131,1059271..1059795))
location: region:1013555-1059795:-1
so has part: feature:1059271-1059795:-1:exon
so has part: feature:1044987-1045131:-1:exon
so has part: feature:1036088-1036187:-1:exon
so has part: feature:1034799-1034897:-1:exon
so has part: feature:1034318-1034363:-1:exon
so has part: feature:1034138-1034178:-1:exon
so has part: feature:1032577-1032650:-1:exon
so has part: feature:1030518-1030587:-1:exon
so has part: feature:1029339-1029466:-1:exon
so has part: feature:1028791-1028902:-1:exon
so has part: feature:1028030-1028195:-1:exon
so has part: feature:1027074-1027207:-1:exon
so has part: feature:1026249-1026326:-1:exon
so has part: feature:1026035-1026123:-1:exon
so has part: feature:1025776-1025820:-1:exon
so has part: feature:1023281-1023356:-1:exon
so has part: feature:1022219-1022324:-1:exon
so has part: feature:1021443-1021525:-1:exon
so has part: feature:1020954-1021003:-1:exon
so has part: feature:1020779-1020848:-1:exon
so has part: feature:1019434-1019518:-1:exon
so has part: feature:1019000-1019139:-1:exon
so has part: feature:1016512-1016650:-1:exon
so has part: feature:1013555-1014058:-1:exon

position:1013555:-1
position: 1013555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059795:-1
position: 1059795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059271-1059795:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044987-1045131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1036088-1036187:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1034799-1034897:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1034318-1034363:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034138-1034178:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1032577-1032650:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1030518-1030587:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029339-1029466:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1028791-1028902:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028030-1028195:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1027074-1027207:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1026249-1026326:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1026035-1026123:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1025776-1025820:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1023281-1023356:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1022219-1022324:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1021443-1021525:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1020954-1021003:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1020779-1020848:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1019434-1019518:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1019000-1019139:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1016512-1016650:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1013555-1014058:-1:exon

LOC121302756
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302756
product: phospholipid-transporting ATPase IB-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041232922.1
SIO_010081: LOC121302756
subclass of: SO_0000673
so part of: LOC121302756
location: complement(join(1013555..1014058,1016512..1016650,1019000..1019139,1019434..1019518,1020779..1020848,1020954..1021003,1021443..1021525,1022219..1022324,1023281..1023356,1025776..1025820,1026035..1026123,1026249..1026326,1027074..1027207,1028030..1028195,1028791..1028902,1029339..1029466,1030518..1030587,1032577..1032650,1034138..1034178,1034318..1034363,1034799..1034897,1036088..1036187,1044987..1045131,1048549..1048816,1051279..1051361))
location: region:1013555-1051361:-1
so has part: feature:1051279-1051361:-1:exon
so has part: feature:1048549-1048816:-1:exon
so has part: feature:1044987-1045131:-1:exon
so has part: feature:1036088-1036187:-1:exon
so has part: feature:1034799-1034897:-1:exon
so has part: feature:1034318-1034363:-1:exon
so has part: feature:1034138-1034178:-1:exon
so has part: feature:1032577-1032650:-1:exon
so has part: feature:1030518-1030587:-1:exon
so has part: feature:1029339-1029466:-1:exon
so has part: feature:1028791-1028902:-1:exon
so has part: feature:1028030-1028195:-1:exon
so has part: feature:1027074-1027207:-1:exon
so has part: feature:1026249-1026326:-1:exon
so has part: feature:1026035-1026123:-1:exon
so has part: feature:1025776-1025820:-1:exon
so has part: feature:1023281-1023356:-1:exon
so has part: feature:1022219-1022324:-1:exon
so has part: feature:1021443-1021525:-1:exon
so has part: feature:1020954-1021003:-1:exon
so has part: feature:1020779-1020848:-1:exon
so has part: feature:1019434-1019518:-1:exon
so has part: feature:1019000-1019139:-1:exon
so has part: feature:1016512-1016650:-1:exon
so has part: feature:1013555-1014058:-1:exon

position:1051361:-1
position: 1051361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051279-1051361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1048549-1048816:-1:exon

position:1048549:-1
position: 1048549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048816:-1
position: 1048816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1044987-1045131:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1036088-1036187:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1034799-1034897:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034318-1034363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1034138-1034178:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1032577-1032650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1030518-1030587:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029339-1029466:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028791-1028902:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1028030-1028195:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1027074-1027207:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1026249-1026326:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1026035-1026123:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1025776-1025820:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1023281-1023356:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1022219-1022324:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1021443-1021525:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1020954-1021003:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1020779-1020848:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1019434-1019518:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1019000-1019139:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1016512-1016650:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1013555-1014058:-1:exon

LOC121302756
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302756
product: phospholipid-transporting ATPase IB-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041232924.1
SIO_010081: LOC121302756
subclass of: SO_0000673
so part of: LOC121302756
location: complement(join(1013952..1014058,1016512..1016650,1019000..1019139,1019434..1019518,1020779..1020848,1020954..1021003,1021443..1021525,1022219..1022324,1023281..1023356,1025776..1025820,1026035..1026123,1026249..1026326,1027074..1027207,1028030..1028195,1028791..1028902,1029339..1029466,1030518..1030587,1032577..1032650,1034138..1034178,1034318..1034363,1034799..1034897,1036088..1036187,1059271..1059791))
location: region:1013952-1059791:-1
so has part: feature:1059271-1059791:-1:exon
so has part: feature:1036088-1036187:-1:exon
so has part: feature:1034799-1034897:-1:exon
so has part: feature:1034318-1034363:-1:exon
so has part: feature:1034138-1034178:-1:exon
so has part: feature:1032577-1032650:-1:exon
so has part: feature:1030518-1030587:-1:exon
so has part: feature:1029339-1029466:-1:exon
so has part: feature:1028791-1028902:-1:exon
so has part: feature:1028030-1028195:-1:exon
so has part: feature:1027074-1027207:-1:exon
so has part: feature:1026249-1026326:-1:exon
so has part: feature:1026035-1026123:-1:exon
so has part: feature:1025776-1025820:-1:exon
so has part: feature:1023281-1023356:-1:exon
so has part: feature:1022219-1022324:-1:exon
so has part: feature:1021443-1021525:-1:exon
so has part: feature:1020954-1021003:-1:exon
so has part: feature:1020779-1020848:-1:exon
so has part: feature:1019434-1019518:-1:exon
so has part: feature:1019000-1019139:-1:exon
so has part: feature:1016512-1016650:-1:exon
so has part: feature:1013952-1014058:-1:exon

position:1013952:-1
position: 1013952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059791:-1
position: 1059791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059271-1059791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036088-1036187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1034799-1034897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1034318-1034363:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1034138-1034178:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1032577-1032650:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1030518-1030587:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1029339-1029466:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1028791-1028902:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1028030-1028195:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1027074-1027207:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1026249-1026326:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1026035-1026123:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1025776-1025820:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1023281-1023356:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1022219-1022324:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1021443-1021525:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1020954-1021003:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1020779-1020848:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1019434-1019518:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1019000-1019139:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1016512-1016650:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1013952-1014058:-1:exon

LOC121302756
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IB-like isoform X3
translation: MYFNRKSKKVHSEGPACSSSGYEKADDEMSGTTSQADLIDAAARTIYLHLPQQSKFCDNHVSTAKYGVLTFLPRFLYEQIRRAANAFFLFIALMQQIPDVSPTGRYTTLVPFLFILTVAGIKEIIEDYKRHKADNTVNKKKTTVLRSGVWQTVIWKQVAVGDFVKVTNGQHLPADMVIVSSSEPQAMCYIETSNLDGETNLKIRQGLSLTASFQSQEDLMAVTGKLECEGPNGHLYDFTGTLRLDNYSPAPLGPDLVLLRGAQLRNTQWVVGIVVYTGHDTKLMQNSTKAPLKRSNVERVTNMQILVLFCILLVMALVSAVGAALWNKEHTEEDWYLFRSDTSQISNNFWYNLLTFIILYNNLIPISLLVTLEVVKFTQALFINWDREMYYSETDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMHFKKCTIAGITYGHFPDLEAERSMEDFSHQPNRSHSSNEFSDPALIQNIEQNHVTAPQISEFLTLLAVCHTVVPEKDGDQIIYQASSPDEGALVKGAKGLGFVFTGRTPHSVIIDARGAEQSYELLNVLEFSSSRKRMSVIVRTPSGKLRLYCKGADNVIMERLGESSQYKDLTLSHLQQFATEGLRTLCFAYADLTESSYQEWLQEYNRVSTILKDRAQKLEECYETIEKNLLLLGATAIEDRLQSGVPETIATLMRADIKIWILTGDKQETAINIGYSCRLISHGMSLIILNEDSLDVSQPSLLL
SIO_010081: LOC121302756
subclass of: SO_0000673
so part of: LOC121302756
location: complement(join(1013967..1014058,1016512..1016650,1019000..1019139,1019434..1019518,1020779..1020848,1020954..1021003,1021443..1021525,1022219..1022324,1023281..1023356,1025776..1025820,1026035..1026123,1026249..1026326,1027074..1027207,1028030..1028195,1028791..1028902,1029339..1029466,1030518..1030587,1032577..1032650,1034138..1034178,1034318..1034363,1034799..1034897,1036088..1036187,1044987..1045131,1059271..1059310))
location: region:1013967-1059310:-1
so has part: feature:1059271-1059310:-1:exon
so has part: feature:1044987-1045131:-1:exon
so has part: feature:1036088-1036187:-1:exon
so has part: feature:1034799-1034897:-1:exon
so has part: feature:1034318-1034363:-1:exon
so has part: feature:1034138-1034178:-1:exon
so has part: feature:1032577-1032650:-1:exon
so has part: feature:1030518-1030587:-1:exon
so has part: feature:1029339-1029466:-1:exon
so has part: feature:1028791-1028902:-1:exon
so has part: feature:1028030-1028195:-1:exon
so has part: feature:1027074-1027207:-1:exon
so has part: feature:1026249-1026326:-1:exon
so has part: feature:1026035-1026123:-1:exon
so has part: feature:1025776-1025820:-1:exon
so has part: feature:1023281-1023356:-1:exon
so has part: feature:1022219-1022324:-1:exon
so has part: feature:1021443-1021525:-1:exon
so has part: feature:1020954-1021003:-1:exon
so has part: feature:1020779-1020848:-1:exon
so has part: feature:1019434-1019518:-1:exon
so has part: feature:1019000-1019139:-1:exon
so has part: feature:1016512-1016650:-1:exon
so has part: feature:1013967-1014058:-1:exon

XP_041088857.1
type: Protein
SIO_000068: ncbiprotein

position:1013967:-1
position: 1013967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059310:-1
position: 1059310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059271-1059310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044987-1045131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1036088-1036187:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1034799-1034897:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1034318-1034363:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034138-1034178:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1032577-1032650:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1030518-1030587:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029339-1029466:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1028791-1028902:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028030-1028195:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1027074-1027207:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1026249-1026326:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1026035-1026123:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1025776-1025820:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1023281-1023356:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1022219-1022324:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1021443-1021525:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1020954-1021003:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1020779-1020848:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1019434-1019518:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1019000-1019139:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1016512-1016650:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1013967-1014058:-1:exon

LOC121302756
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IB-like isoform X1
translation: MYFNRKSKKVHSEEQLVLDTFSTENACVSPKGEDEGLGAGMRSRMSDKRGPWTCDMRPACSSSGYEKADDEMSGTTSQADLIDAAARTIYLHLPQQSKFCDNHVSTAKYGVLTFLPRFLYEQIRRAANAFFLFIALMQQIPDVSPTGRYTTLVPFLFILTVAGIKEIIEDYKRHKADNTVNKKKTTVLRSGVWQTVIWKQVAVGDFVKVTNGQHLPADMVIVSSSEPQAMCYIETSNLDGETNLKIRQGLSLTASFQSQEDLMAVTGKLECEGPNGHLYDFTGTLRLDNYSPAPLGPDLVLLRGAQLRNTQWVVGIVVYTGHDTKLMQNSTKAPLKRSNVERVTNMQILVLFCILLVMALVSAVGAALWNKEHTEEDWYLFRSDTSQISNNFWYNLLTFIILYNNLIPISLLVTLEVVKFTQALFINWDREMYYSETDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMHFKKCTIAGITYGHFPDLEAERSMEDFSHQPNRSHSSNEFSDPALIQNIEQNHVTAPQISEFLTLLAVCHTVVPEKDGDQIIYQASSPDEGALVKGAKGLGFVFTGRTPHSVIIDARGAEQSYELLNVLEFSSSRKRMSVIVRTPSGKLRLYCKGADNVIMERLGESSQYKDLTLSHLQQFATEGLRTLCFAYADLTESSYQEWLQEYNRVSTILKDRAQKLEECYETIEKNLLLLGATAIEDRLQSGVPETIATLMRADIKIWILTGDKQETAINIGYSCRLISHGMSLIILNEDSLDVSQPSLLL
SIO_010081: LOC121302756
subclass of: SO_0000673
so part of: LOC121302756
location: complement(join(1013967..1014058,1016512..1016650,1019000..1019139,1019434..1019518,1020779..1020848,1020954..1021003,1021443..1021525,1022219..1022324,1023281..1023356,1025776..1025820,1026035..1026123,1026249..1026326,1027074..1027207,1028030..1028195,1028791..1028902,1029339..1029466,1030518..1030587,1032577..1032650,1034138..1034178,1034318..1034363,1034799..1034897,1036088..1036187,1044987..1045131,1051279..1051407,1059271..1059310))
location: region:1013967-1059310:-1
so has part: feature:1059271-1059310:-1:exon
so has part: feature:1051279-1051407:-1:exon
so has part: feature:1044987-1045131:-1:exon
so has part: feature:1036088-1036187:-1:exon
so has part: feature:1034799-1034897:-1:exon
so has part: feature:1034318-1034363:-1:exon
so has part: feature:1034138-1034178:-1:exon
so has part: feature:1032577-1032650:-1:exon
so has part: feature:1030518-1030587:-1:exon
so has part: feature:1029339-1029466:-1:exon
so has part: feature:1028791-1028902:-1:exon
so has part: feature:1028030-1028195:-1:exon
so has part: feature:1027074-1027207:-1:exon
so has part: feature:1026249-1026326:-1:exon
so has part: feature:1026035-1026123:-1:exon
so has part: feature:1025776-1025820:-1:exon
so has part: feature:1023281-1023356:-1:exon
so has part: feature:1022219-1022324:-1:exon
so has part: feature:1021443-1021525:-1:exon
so has part: feature:1020954-1021003:-1:exon
so has part: feature:1020779-1020848:-1:exon
so has part: feature:1019434-1019518:-1:exon
so has part: feature:1019000-1019139:-1:exon
so has part: feature:1016512-1016650:-1:exon
so has part: feature:1013967-1014058:-1:exon

XP_041088855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1059271-1059310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1051279-1051407:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044987-1045131:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1036088-1036187:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1034799-1034897:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034318-1034363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1034138-1034178:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1032577-1032650:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1030518-1030587:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029339-1029466:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028791-1028902:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1028030-1028195:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1027074-1027207:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1026249-1026326:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1026035-1026123:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1025776-1025820:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1023281-1023356:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1022219-1022324:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1021443-1021525:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1020954-1021003:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1020779-1020848:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1019434-1019518:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1019000-1019139:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1016512-1016650:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1013967-1014058:-1:exon

LOC121302756
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IB-like isoform X2
translation: MQPRQLANMPLLLNRWRRRGSVGPACSSSGYEKADDEMSGTTSQADLIDAAARTIYLHLPQQSKFCDNHVSTAKYGVLTFLPRFLYEQIRRAANAFFLFIALMQQIPDVSPTGRYTTLVPFLFILTVAGIKEIIEDYKRHKADNTVNKKKTTVLRSGVWQTVIWKQVAVGDFVKVTNGQHLPADMVIVSSSEPQAMCYIETSNLDGETNLKIRQGLSLTASFQSQEDLMAVTGKLECEGPNGHLYDFTGTLRLDNYSPAPLGPDLVLLRGAQLRNTQWVVGIVVYTGHDTKLMQNSTKAPLKRSNVERVTNMQILVLFCILLVMALVSAVGAALWNKEHTEEDWYLFRSDTSQISNNFWYNLLTFIILYNNLIPISLLVTLEVVKFTQALFINWDREMYYSETDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMHFKKCTIAGITYGHFPDLEAERSMEDFSHQPNRSHSSNEFSDPALIQNIEQNHVTAPQISEFLTLLAVCHTVVPEKDGDQIIYQASSPDEGALVKGAKGLGFVFTGRTPHSVIIDARGAEQSYELLNVLEFSSSRKRMSVIVRTPSGKLRLYCKGADNVIMERLGESSQYKDLTLSHLQQFATEGLRTLCFAYADLTESSYQEWLQEYNRVSTILKDRAQKLEECYETIEKNLLLLGATAIEDRLQSGVPETIATLMRADIKIWILTGDKQETAINIGYSCRLISHGMSLIILNEDSLDVSQPSLLL
SIO_010081: LOC121302756
subclass of: SO_0000673
so part of: LOC121302756
location: complement(join(1013967..1014058,1016512..1016650,1019000..1019139,1019434..1019518,1020779..1020848,1020954..1021003,1021443..1021525,1022219..1022324,1023281..1023356,1025776..1025820,1026035..1026123,1026249..1026326,1027074..1027207,1028030..1028195,1028791..1028902,1029339..1029466,1030518..1030587,1032577..1032650,1034138..1034178,1034318..1034363,1034799..1034897,1036088..1036187,1044987..1045131,1048549..1048615))
location: region:1013967-1048615:-1
so has part: feature:1048549-1048615:-1:exon
so has part: feature:1044987-1045131:-1:exon
so has part: feature:1036088-1036187:-1:exon
so has part: feature:1034799-1034897:-1:exon
so has part: feature:1034318-1034363:-1:exon
so has part: feature:1034138-1034178:-1:exon
so has part: feature:1032577-1032650:-1:exon
so has part: feature:1030518-1030587:-1:exon
so has part: feature:1029339-1029466:-1:exon
so has part: feature:1028791-1028902:-1:exon
so has part: feature:1028030-1028195:-1:exon
so has part: feature:1027074-1027207:-1:exon
so has part: feature:1026249-1026326:-1:exon
so has part: feature:1026035-1026123:-1:exon
so has part: feature:1025776-1025820:-1:exon
so has part: feature:1023281-1023356:-1:exon
so has part: feature:1022219-1022324:-1:exon
so has part: feature:1021443-1021525:-1:exon
so has part: feature:1020954-1021003:-1:exon
so has part: feature:1020779-1020848:-1:exon
so has part: feature:1019434-1019518:-1:exon
so has part: feature:1019000-1019139:-1:exon
so has part: feature:1016512-1016650:-1:exon
so has part: feature:1013967-1014058:-1:exon

XP_041088856.1
type: Protein
SIO_000068: ncbiprotein

position:1048615:-1
position: 1048615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048549-1048615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044987-1045131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1036088-1036187:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1034799-1034897:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1034318-1034363:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1034138-1034178:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1032577-1032650:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1030518-1030587:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029339-1029466:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1028791-1028902:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028030-1028195:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1027074-1027207:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1026249-1026326:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1026035-1026123:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1025776-1025820:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1023281-1023356:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1022219-1022324:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1021443-1021525:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1020954-1021003:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1020779-1020848:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1019434-1019518:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1019000-1019139:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1016512-1016650:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1013967-1014058:-1:exon

LOC121302756
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IB-like isoform X4
translation: MQQIPDVSPTGRYTTLVPFLFILTVAGIKEIIEDYKRHKADNTVNKKKTTVLRSGVWQTVIWKQVAVGDFVKVTNGQHLPADMVIVSSSEPQAMCYIETSNLDGETNLKIRQGLSLTASFQSQEDLMAVTGKLECEGPNGHLYDFTGTLRLDNYSPAPLGPDLVLLRGAQLRNTQWVVGIVVYTGHDTKLMQNSTKAPLKRSNVERVTNMQILVLFCILLVMALVSAVGAALWNKEHTEEDWYLFRSDTSQISNNFWYNLLTFIILYNNLIPISLLVTLEVVKFTQALFINWDREMYYSETDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMHFKKCTIAGITYGHFPDLEAERSMEDFSHQPNRSHSSNEFSDPALIQNIEQNHVTAPQISEFLTLLAVCHTVVPEKDGDQIIYQASSPDEGALVKGAKGLGFVFTGRTPHSVIIDARGAEQSYELLNVLEFSSSRKRMSVIVRTPSGKLRLYCKGADNVIMERLGESSQYKDLTLSHLQQFATEGLRTLCFAYADLTESSYQEWLQEYNRVSTILKDRAQKLEECYETIEKNLLLLGATAIEDRLQSGVPETIATLMRADIKIWILTGDKQETAINIGYSCRLISHGMSLIILNEDSLDVSQPSLLL
SIO_010081: LOC121302756
subclass of: SO_0000673
so part of: LOC121302756
location: complement(join(1013967..1014058,1016512..1016650,1019000..1019139,1019434..1019518,1020779..1020848,1020954..1021003,1021443..1021525,1022219..1022324,1023281..1023356,1025776..1025820,1026035..1026123,1026249..1026326,1027074..1027207,1028030..1028195,1028791..1028902,1029339..1029466,1030518..1030587,1032577..1032650,1034138..1034178,1034318..1034363,1034799..1034897,1036088..1036093))
location: region:1013967-1036093:-1
so has part: feature:1036088-1036093:-1:exon
so has part: feature:1034799-1034897:-1:exon
so has part: feature:1034318-1034363:-1:exon
so has part: feature:1034138-1034178:-1:exon
so has part: feature:1032577-1032650:-1:exon
so has part: feature:1030518-1030587:-1:exon
so has part: feature:1029339-1029466:-1:exon
so has part: feature:1028791-1028902:-1:exon
so has part: feature:1028030-1028195:-1:exon
so has part: feature:1027074-1027207:-1:exon
so has part: feature:1026249-1026326:-1:exon
so has part: feature:1026035-1026123:-1:exon
so has part: feature:1025776-1025820:-1:exon
so has part: feature:1023281-1023356:-1:exon
so has part: feature:1022219-1022324:-1:exon
so has part: feature:1021443-1021525:-1:exon
so has part: feature:1020954-1021003:-1:exon
so has part: feature:1020779-1020848:-1:exon
so has part: feature:1019434-1019518:-1:exon
so has part: feature:1019000-1019139:-1:exon
so has part: feature:1016512-1016650:-1:exon
so has part: feature:1013967-1014058:-1:exon

XP_041088858.1
type: Protein
SIO_000068: ncbiprotein

position:1036093:-1
position: 1036093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1036088-1036093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1034799-1034897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1034318-1034363:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1034138-1034178:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1032577-1032650:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1030518-1030587:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1029339-1029466:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1028791-1028902:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1028030-1028195:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1027074-1027207:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1026249-1026326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1026035-1026123:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1025776-1025820:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1023281-1023356:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1022219-1022324:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1021443-1021525:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1020954-1021003:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1020779-1020848:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1019434-1019518:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1019000-1019139:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1016512-1016650:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1013967-1014058:-1:exon

rnf6
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: rnf6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1061314..1072580)
location: region:1061314-1072580:-1
so has part: feature:1061314-1072580:-1:exon
subclass of: SO_0000010

121302781
type: Gene
SIO_000068: ncbigene

position:1061314:-1
position: 1061314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072580:-1
position: 1072580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061314-1072580:-1:exon

rnf6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: rnf6
product: ring finger protein (C3H2C3 type) 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041232988.1
SIO_010081: rnf6
subclass of: SO_0000673
so part of: rnf6
location: complement(join(1061314..1067691,1068535..1068645,1070630..1070850,1072508..1072580))
location: region:1061314-1072580:-1
so has part: feature:1072508-1072580:-1:exon
so has part: feature:1070630-1070850:-1:exon
so has part: feature:1068535-1068645:-1:exon
so has part: feature:1061314-1067691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1072508-1072580:-1:exon

position:1072508:-1
position: 1072508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1070630-1070850:-1:exon

position:1070630:-1
position: 1070630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070850:-1
position: 1070850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1068535-1068645:-1:exon

position:1068535:-1
position: 1068535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068645:-1
position: 1068645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1061314-1067691:-1:exon

position:1067691:-1
position: 1067691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rnf6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: rnf6
product: ring finger protein (C3H2C3 type) 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_041232989.1
SIO_010081: rnf6
subclass of: SO_0000673
so part of: rnf6
location: complement(join(1061314..1067691,1068535..1068645,1070630..1070847,1072508..1072570))
location: region:1061314-1072570:-1
so has part: feature:1072508-1072570:-1:exon
so has part: feature:1070630-1070847:-1:exon
so has part: feature:1068535-1068645:-1:exon
so has part: feature:1061314-1067691:-1:exon

position:1072570:-1
position: 1072570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1072508-1072570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1070630-1070847:-1:exon

position:1070847:-1
position: 1070847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1068535-1068645:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1061314-1067691:-1:exon

rnf6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: rnf6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF6
translation: MDPPSSGPERAGERGQAPSQERSHSEDERRRQQERLNREEAYYQFINELSEEDYRLMRDSNLLGTPGEITAQELRQRLDGAKERLSSQPRAENGEAVQQDTNRGSEAPGESSNGDSLLQWLNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHDQHEHSYDSGNEQPADTSSLPGATESGRLQRSTSTTARRTRNSTARLDPGRQAARSAGRTRNVQRTDIAEPSSAAAQRRLRSSTGRRALRRLRSALQQRSMGRTAEQRLERGQECPRVVQESGGQVGAPQSSEPRSSRTRTRINLRTGEDSDPQGRRSRSSASRRSRSPLRRSSAASASVSASASASASTAQLEESLDTSAEQRPSRVSGREAVGTAASAREGGQLESGSPSVEPPSLGVASEGVVEEAESNSSSSASVRRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRVRMAENTVTFESDSGGFRRTISRSERAGIRTYVSTIRIPLRRISETGLGEPSSVALRSILRQIMTGFGELSSLMETEADSEGNPGSRSVDNGSATNSFQIHTNDSNASSVSLASRQPEAEPAVPLGLSAGTQLSGPGSGSREGRQSSRDTNNLVENGTLPILRLAHFFLLNDDEDDDHPRGLTKEQIDNLSTRNYGEGNLEAELSKTCSVCINEYAAGNKLRRLPCTHEFHIHCIDRWLSENSTCPICRQPVLDTRQN
SIO_010081: rnf6
subclass of: SO_0000673
so part of: rnf6
location: complement(join(1065857..1067691,1068535..1068645,1070630..1070828))
location: region:1065857-1070828:-1
so has part: feature:1070630-1070828:-1:exon
so has part: feature:1068535-1068645:-1:exon
so has part: feature:1065857-1067691:-1:exon

XP_041088922.1
type: Protein
SIO_000068: ncbiprotein

position:1065857:-1
position: 1065857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070828:-1
position: 1070828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1070630-1070828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1068535-1068645:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1065857-1067691:-1:exon

rnf6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: rnf6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF6
translation: MDPPSSGPERAGERGQAPSQERSHSEDERRRQQERLNREEAYYQFINELSEEDYRLMRDSNLLGTPGEITAQELRQRLDGAKERLSSQPRAENGEAVQQDTNRGSEAPGESSNGDSLLQWLNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHDQHEHSYDSGNEQPADTSSLPGATESGRLQRSTSTTARRTRNSTARLDPGRQAARSAGRTRNVQRTDIAEPSSAAAQRRLRSSTGRRALRRLRSALQQRSMGRTAEQRLERGQECPRVVQESGGQVGAPQSSEPRSSRTRTRINLRTGEDSDPQGRRSRSSASRRSRSPLRRSSAASASVSASASASASTAQLEESLDTSAEQRPSRVSGREAVGTAASAREGGQLESGSPSVEPPSLGVASEGVVEEAESNSSSSASVRRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRVRMAENTVTFESDSGGFRRTISRSERAGIRTYVSTIRIPLRRISETGLGEPSSVALRSILRQIMTGFGELSSLMETEADSEGNPGSRSVDNGSATNSFQIHTNDSNASSVSLASRQPEAEPAVPLGLSAGTQLSGPGSGSREGRQSSRDTNNLVENGTLPILRLAHFFLLNDDEDDDHPRGLTKEQIDNLSTRNYGEGNLEAELSKTCSVCINEYAAGNKLRRLPCTHEFHIHCIDRWLSENSTCPICRQPVLDTRQN
SIO_010081: rnf6
subclass of: SO_0000673
so part of: rnf6
location: complement(join(1065857..1067691,1068535..1068645,1070630..1070828))
location: region:1065857-1070828:-1
so has part: feature:1070630-1070828:-1:exon
so has part: feature:1068535-1068645:-1:exon
so has part: feature:1065857-1067691:-1:exon

XP_041088923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1070630-1070828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1068535-1068645:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1065857-1067691:-1:exon

cdk8
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: cdk8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1076095..1125284
location: region:1076095-1125284:1
so has part: feature:1076095-1125284:1:exon
subclass of: SO_0000010

121302693
type: Gene
SIO_000068: ncbigene

position:1076095:1
position: 1076095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125284:1
position: 1125284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076095-1125284:1:exon

cdk8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: cdk8
product: cyclin-dependent kinase 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041232776.1
SIO_010081: cdk8
subclass of: SO_0000673
so part of: cdk8
location: join(1076095..1076595,1093737..1093812,1095493..1095603,1096296..1096436,1105036..1105093,1107339..1107470,1109183..1109326,1113572..1113641,1117858..1117930,1120073..1120170,1123054..1123132,1123681..1123839,1124219..1125284)
location: region:1076095-1125284:1
so has part: feature:1076095-1076595:1:exon
so has part: feature:1093737-1093812:1:exon
so has part: feature:1095493-1095603:1:exon
so has part: feature:1096296-1096436:1:exon
so has part: feature:1105036-1105093:1:exon
so has part: feature:1107339-1107470:1:exon
so has part: feature:1109183-1109326:1:exon
so has part: feature:1113572-1113641:1:exon
so has part: feature:1117858-1117930:1:exon
so has part: feature:1120073-1120170:1:exon
so has part: feature:1123054-1123132:1:exon
so has part: feature:1123681-1123839:1:exon
so has part: feature:1124219-1125284:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1076095-1076595:1:exon

position:1076595:1
position: 1076595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1093737-1093812:1:exon

position:1093737:1
position: 1093737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093812:1
position: 1093812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1095493-1095603:1:exon

position:1095493:1
position: 1095493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095603:1
position: 1095603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1096296-1096436:1:exon

position:1096296:1
position: 1096296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096436:1
position: 1096436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1105036-1105093:1:exon

position:1105036:1
position: 1105036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1105093:1
position: 1105093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1107339-1107470:1:exon

position:1107339:1
position: 1107339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107470:1
position: 1107470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1109183-1109326:1:exon

position:1109183:1
position: 1109183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109326:1
position: 1109326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1113572-1113641:1:exon

position:1113572:1
position: 1113572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1113641:1
position: 1113641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1117858-1117930:1:exon

position:1117858:1
position: 1117858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1117930:1
position: 1117930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1120073-1120170:1:exon

position:1120073:1
position: 1120073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120170:1
position: 1120170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1123054-1123132:1:exon

position:1123054:1
position: 1123054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123132:1
position: 1123132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1123681-1123839:1:exon

position:1123681:1
position: 1123681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123839:1
position: 1123839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1124219-1125284:1:exon

position:1124219:1
position: 1124219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cdk8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: cdk8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 8
translation: MDYDFKVRLTSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPPEKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRMTSEQALQDLYFLEDPLPTSDVFAGCQIPYPKREFLTEEEPEDKGDKKNQQQQQGNNHTNGAGHTGNQDNSHAQGPPLKKVRVVPPTNTSSGLIMTSDYQRSNPHAAYQNPGPSASLPQSSMGYSSTSQQPPQYSHQTLRY
SIO_010081: cdk8
subclass of: SO_0000673
so part of: cdk8
location: join(1076468..1076595,1093737..1093812,1095493..1095603,1096296..1096436,1105036..1105093,1107339..1107470,1109183..1109326,1113572..1113641,1117858..1117930,1120073..1120170,1123054..1123132,1123681..1123839,1124219..1124344)
location: region:1076468-1124344:1
so has part: feature:1076468-1076595:1:exon
so has part: feature:1093737-1093812:1:exon
so has part: feature:1095493-1095603:1:exon
so has part: feature:1096296-1096436:1:exon
so has part: feature:1105036-1105093:1:exon
so has part: feature:1107339-1107470:1:exon
so has part: feature:1109183-1109326:1:exon
so has part: feature:1113572-1113641:1:exon
so has part: feature:1117858-1117930:1:exon
so has part: feature:1120073-1120170:1:exon
so has part: feature:1123054-1123132:1:exon
so has part: feature:1123681-1123839:1:exon
so has part: feature:1124219-1124344:1:exon

XP_041088710.1
type: Protein
SIO_000068: ncbiprotein

position:1076468:1
position: 1076468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124344:1
position: 1124344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076468-1076595:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1093737-1093812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1095493-1095603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096296-1096436:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1105036-1105093:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1107339-1107470:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1109183-1109326:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1113572-1113641:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1117858-1117930:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1120073-1120170:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1123054-1123132:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1123681-1123839:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1124219-1124344:1:exon

wasf3b
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: wasf3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1127389..1155587
location: region:1127389-1155587:1
so has part: feature:1127389-1155587:1:exon
subclass of: SO_0000010

121302904
type: Gene
SIO_000068: ncbigene

position:1127389:1
position: 1127389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155587:1
position: 1155587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1127389-1155587:1:exon

wasf3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: wasf3b
product: WASP family member 3b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041233231.1
SIO_010081: wasf3b
subclass of: SO_0000673
so part of: wasf3b
location: join(1127389..1127652,1135665..1135823,1142152..1142286,1144268..1144421,1144594..1144711,1145905..1146098,1150501..1150833,1152187..1152509,1153421..1155587)
location: region:1127389-1155587:1
so has part: feature:1127389-1127652:1:exon
so has part: feature:1135665-1135823:1:exon
so has part: feature:1142152-1142286:1:exon
so has part: feature:1144268-1144421:1:exon
so has part: feature:1144594-1144711:1:exon
so has part: feature:1145905-1146098:1:exon
so has part: feature:1150501-1150833:1:exon
so has part: feature:1152187-1152509:1:exon
so has part: feature:1153421-1155587:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1127389-1127652:1:exon

position:1127652:1
position: 1127652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1135665-1135823:1:exon

position:1135665:1
position: 1135665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1135823:1
position: 1135823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1142152-1142286:1:exon

position:1142152:1
position: 1142152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142286:1
position: 1142286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1144268-1144421:1:exon

position:1144268:1
position: 1144268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144421:1
position: 1144421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1144594-1144711:1:exon

position:1144594:1
position: 1144594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144711:1
position: 1144711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1145905-1146098:1:exon

position:1145905:1
position: 1145905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146098:1
position: 1146098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1150501-1150833:1:exon

position:1150501:1
position: 1150501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150833:1
position: 1150833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1152187-1152509:1:exon

position:1152187:1
position: 1152187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152509:1
position: 1152509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1153421-1155587:1:exon

position:1153421:1
position: 1153421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

wasf3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: wasf3b
product: WASP family member 3b, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_041233234.1
SIO_010081: wasf3b
subclass of: SO_0000673
so part of: wasf3b
location: join(1128792..1128928,1135665..1135823,1142152..1142286,1144268..1144421,1144594..1144711,1149276..1149427,1150501..1150833,1152187..1152509,1153421..1155587)
location: region:1128792-1155587:1
so has part: feature:1128792-1128928:1:exon
so has part: feature:1135665-1135823:1:exon
so has part: feature:1142152-1142286:1:exon
so has part: feature:1144268-1144421:1:exon
so has part: feature:1144594-1144711:1:exon
so has part: feature:1149276-1149427:1:exon
so has part: feature:1150501-1150833:1:exon
so has part: feature:1152187-1152509:1:exon
so has part: feature:1153421-1155587:1:exon

position:1128792:1
position: 1128792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1128792-1128928:1:exon

position:1128928:1
position: 1128928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1135665-1135823:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1142152-1142286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144268-1144421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144594-1144711:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1149276-1149427:1:exon

position:1149276:1
position: 1149276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149427:1
position: 1149427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1150501-1150833:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1152187-1152509:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1153421-1155587:1:exon

wasf3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: wasf3b
product: WASP family member 3b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_041233230.1
SIO_010081: wasf3b
subclass of: SO_0000673
so part of: wasf3b
location: join(1128795..1128928,1135665..1135823,1142152..1142286,1144268..1144421,1144594..1144711,1145905..1146098,1150501..1150833,1152187..1152509,1153421..1155587)
location: region:1128795-1155587:1
so has part: feature:1128795-1128928:1:exon
so has part: feature:1135665-1135823:1:exon
so has part: feature:1142152-1142286:1:exon
so has part: feature:1144268-1144421:1:exon
so has part: feature:1144594-1144711:1:exon
so has part: feature:1145905-1146098:1:exon
so has part: feature:1150501-1150833:1:exon
so has part: feature:1152187-1152509:1:exon
so has part: feature:1153421-1155587:1:exon

position:1128795:1
position: 1128795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1128795-1128928:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1135665-1135823:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1142152-1142286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144268-1144421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144594-1144711:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1145905-1146098:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1150501-1150833:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1152187-1152509:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1153421-1155587:1:exon

wasf3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: wasf3b
product: WASP family member 3b, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041233232.1
SIO_010081: wasf3b
subclass of: SO_0000673
so part of: wasf3b
location: join(1132170..1132189,1135665..1135823,1142152..1142286,1144268..1144421,1144594..1144711,1145905..1146098,1150501..1150833,1152187..1152509,1153421..1155587)
location: region:1132170-1155587:1
so has part: feature:1132170-1132189:1:exon
so has part: feature:1135665-1135823:1:exon
so has part: feature:1142152-1142286:1:exon
so has part: feature:1144268-1144421:1:exon
so has part: feature:1144594-1144711:1:exon
so has part: feature:1145905-1146098:1:exon
so has part: feature:1150501-1150833:1:exon
so has part: feature:1152187-1152509:1:exon
so has part: feature:1153421-1155587:1:exon

position:1132170:1
position: 1132170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132170-1132189:1:exon

position:1132189:1
position: 1132189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1135665-1135823:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1142152-1142286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144268-1144421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144594-1144711:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1145905-1146098:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1150501-1150833:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1152187-1152509:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1153421-1155587:1:exon

wasf3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: wasf3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3b isoform X1
translation: MPLVKRNIEPRHLCRGALPEGITSELECVTNNTLSAIIRQLSILSKHAEDIFGELFNEANTFYLRASSLQDRVDRLAVKVTQLDSTVEEVSLQDINMRKAFKSSRTQDQQAVSKNSIPNPVVEIYNQSDKPPPLNILSPYRDDKKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQKRVDGSSTGTGTSREVKNVRKARNRRQEWNMMAYDKELRPDNRLSQNIYHGASSEGSMSPDNRSHGSDITDFSYPATPSHSAHLNHLQQQQQQQQQQQQQQQAAIAALAASYLTGESQQHLMNASQALEHDYRPSAPGYKQGTLSRPQQPPPPPPPNPDGTLHAALQPPPADYSMSTAQMMEYYGIAGPPPPPPAPLIPSAQTAFVSPMQVPSPPPGGYAPPPPPPPGPMVVAPPPPGPPPLPPPSFTQTPSPLHEGKRHEASSQQPASDARSDLLAAIRMGIQLKKGQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSEFEENEWSD
SIO_010081: wasf3b
subclass of: SO_0000673
so part of: wasf3b
location: join(1135691..1135823,1142152..1142286,1144268..1144421,1144594..1144711,1145905..1146098,1150501..1150833,1152187..1152509,1153421..1153578)
location: region:1135691-1153578:1
so has part: feature:1135691-1135823:1:exon
so has part: feature:1142152-1142286:1:exon
so has part: feature:1144268-1144421:1:exon
so has part: feature:1144594-1144711:1:exon
so has part: feature:1145905-1146098:1:exon
so has part: feature:1150501-1150833:1:exon
so has part: feature:1152187-1152509:1:exon
so has part: feature:1153421-1153578:1:exon

XP_041089164.1
type: Protein
SIO_000068: ncbiprotein

position:1135691:1
position: 1135691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153578:1
position: 1153578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1135691-1135823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142152-1142286:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1144268-1144421:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144594-1144711:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1145905-1146098:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1150501-1150833:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1152187-1152509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1153421-1153578:1:exon

wasf3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: wasf3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3b isoform X1
translation: MPLVKRNIEPRHLCRGALPEGITSELECVTNNTLSAIIRQLSILSKHAEDIFGELFNEANTFYLRASSLQDRVDRLAVKVTQLDSTVEEVSLQDINMRKAFKSSRTQDQQAVSKNSIPNPVVEIYNQSDKPPPLNILSPYRDDKKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQKRVDGSSTGTGTSREVKNVRKARNRRQEWNMMAYDKELRPDNRLSQNIYHGASSEGSMSPDNRSHGSDITDFSYPATPSHSAHLNHLQQQQQQQQQQQQQQQAAIAALAASYLTGESQQHLMNASQALEHDYRPSAPGYKQGTLSRPQQPPPPPPPNPDGTLHAALQPPPADYSMSTAQMMEYYGIAGPPPPPPAPLIPSAQTAFVSPMQVPSPPPGGYAPPPPPPPGPMVVAPPPPGPPPLPPPSFTQTPSPLHEGKRHEASSQQPASDARSDLLAAIRMGIQLKKGQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSEFEENEWSD
SIO_010081: wasf3b
subclass of: SO_0000673
so part of: wasf3b
location: join(1135691..1135823,1142152..1142286,1144268..1144421,1144594..1144711,1145905..1146098,1150501..1150833,1152187..1152509,1153421..1153578)
location: region:1135691-1153578:1
so has part: feature:1135691-1135823:1:exon
so has part: feature:1142152-1142286:1:exon
so has part: feature:1144268-1144421:1:exon
so has part: feature:1144594-1144711:1:exon
so has part: feature:1145905-1146098:1:exon
so has part: feature:1150501-1150833:1:exon
so has part: feature:1152187-1152509:1:exon
so has part: feature:1153421-1153578:1:exon

XP_041089165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1135691-1135823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142152-1142286:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1144268-1144421:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144594-1144711:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1145905-1146098:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1150501-1150833:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1152187-1152509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1153421-1153578:1:exon

wasf3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: wasf3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3b isoform X1
translation: MPLVKRNIEPRHLCRGALPEGITSELECVTNNTLSAIIRQLSILSKHAEDIFGELFNEANTFYLRASSLQDRVDRLAVKVTQLDSTVEEVSLQDINMRKAFKSSRTQDQQAVSKNSIPNPVVEIYNQSDKPPPLNILSPYRDDKKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQKRVDGSSTGTGTSREVKNVRKARNRRQEWNMMAYDKELRPDNRLSQNIYHGASSEGSMSPDNRSHGSDITDFSYPATPSHSAHLNHLQQQQQQQQQQQQQQQAAIAALAASYLTGESQQHLMNASQALEHDYRPSAPGYKQGTLSRPQQPPPPPPPNPDGTLHAALQPPPADYSMSTAQMMEYYGIAGPPPPPPAPLIPSAQTAFVSPMQVPSPPPGGYAPPPPPPPGPMVVAPPPPGPPPLPPPSFTQTPSPLHEGKRHEASSQQPASDARSDLLAAIRMGIQLKKGQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSEFEENEWSD
SIO_010081: wasf3b
subclass of: SO_0000673
so part of: wasf3b
location: join(1135691..1135823,1142152..1142286,1144268..1144421,1144594..1144711,1145905..1146098,1150501..1150833,1152187..1152509,1153421..1153578)
location: region:1135691-1153578:1
so has part: feature:1135691-1135823:1:exon
so has part: feature:1142152-1142286:1:exon
so has part: feature:1144268-1144421:1:exon
so has part: feature:1144594-1144711:1:exon
so has part: feature:1145905-1146098:1:exon
so has part: feature:1150501-1150833:1:exon
so has part: feature:1152187-1152509:1:exon
so has part: feature:1153421-1153578:1:exon

XP_041089166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1135691-1135823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142152-1142286:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1144268-1144421:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144594-1144711:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1145905-1146098:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1150501-1150833:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1152187-1152509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1153421-1153578:1:exon

wasf3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: wasf3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 3b isoform X2
translation: MPLVKRNIEPRHLCRGALPEGITSELECVTNNTLSAIIRQLSILSKHAEDIFGELFNEANTFYLRASSLQDRVDRLAVKVTQLDSTVEEVSLQDINMRKAFKSSRTQDQQAVSKNSIPNPVVEIYNQSDKPPPLNILSPYRDDKKDGLKFYTDPSYFFDLWKEKMLQDTEDKRKEKRRQKRERHKLNLTRNLQVSVRRVRTRKDEWERMKMGREFMSETKKRELQGSATDGSHGSDITDFSYPATPSHSAHLNHLQQQQQQQQQQQQQQQAAIAALAASYLTGESQQHLMNASQALEHDYRPSAPGYKQGTLSRPQQPPPPPPPNPDGTLHAALQPPPADYSMSTAQMMEYYGIAGPPPPPPAPLIPSAQTAFVSPMQVPSPPPGGYAPPPPPPPGPMVVAPPPPGPPPLPPPSFTQTPSPLHEGKRHEASSQQPASDARSDLLAAIRMGIQLKKGQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSEFEENEWSD
SIO_010081: wasf3b
subclass of: SO_0000673
so part of: wasf3b
location: join(1135691..1135823,1142152..1142286,1144268..1144421,1144594..1144711,1149276..1149427,1150501..1150833,1152187..1152509,1153421..1153578)
location: region:1135691-1153578:1
so has part: feature:1135691-1135823:1:exon
so has part: feature:1142152-1142286:1:exon
so has part: feature:1144268-1144421:1:exon
so has part: feature:1144594-1144711:1:exon
so has part: feature:1149276-1149427:1:exon
so has part: feature:1150501-1150833:1:exon
so has part: feature:1152187-1152509:1:exon
so has part: feature:1153421-1153578:1:exon

XP_041089168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1135691-1135823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142152-1142286:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1144268-1144421:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144594-1144711:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1149276-1149427:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1150501-1150833:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1152187-1152509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1153421-1153578:1:exon

gpr12
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: gpr12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1160268..1164775)
location: region:1160268-1164775:-1
so has part: feature:1160268-1164775:-1:exon
subclass of: SO_0000010

121302906
type: Gene
SIO_000068: ncbigene

position:1160268:-1
position: 1160268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164775:-1
position: 1164775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1160268-1164775:-1:exon

gpr12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: gpr12
product: G protein-coupled receptor 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041233237.1
SIO_010081: gpr12
subclass of: SO_0000673
so part of: gpr12
location: complement(join(1160268..1163715,1164484..1164775))
location: region:1160268-1164775:-1
so has part: feature:1164484-1164775:-1:exon
so has part: feature:1160268-1163715:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1164484-1164775:-1:exon

position:1164484:-1
position: 1164484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1160268-1163715:-1:exon

position:1163715:-1
position: 1163715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gpr12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: gpr12
product: G protein-coupled receptor 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041233238.1
SIO_010081: gpr12
subclass of: SO_0000673
so part of: gpr12
location: complement(join(1160268..1163715,1164395..1164483))
location: region:1160268-1164483:-1
so has part: feature:1164395-1164483:-1:exon
so has part: feature:1160268-1163715:-1:exon

position:1164483:-1
position: 1164483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164395-1164483:-1:exon

position:1164395:-1
position: 1164395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1160268-1163715:-1:exon

gpr12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: gpr12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 12
translation: MNEGLQANVSWRLDRASENVSTAVSSLDPILNADPQPIVNPWDIVLCTSGTVISCENAIVVLIIFHNPSLRAPMFLLIGSLALADLLAGLGLVINFIFTYLLQSDSAKLVTLGLVVASFSASVCSLLAITIDRYLSLYYALTYNSERTVTFTYVMLVVLWGTSICLGLLPVMGWNCLQDESTCSIIRPLTKNNVASLSVSFLLMFGLMLQLYVQICKIVMRHAHQIALQHHFLATSHYVTTRKGVSTLAIILGTFAACWMPFTLYSLIADYTYPSIYTYATLLPASYNSIINPVIYAFRNQEIQKALWLICCGCIPASVSQRARSPSDV
SIO_010081: gpr12
subclass of: SO_0000673
so part of: gpr12
location: complement(1162714..1163703)
location: region:1162714-1163703:-1
so has part: feature:1162714-1163703:-1:exon

XP_041089171.1
type: Protein
SIO_000068: ncbiprotein

position:1162714:-1
position: 1162714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163703:-1
position: 1163703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1162714-1163703:-1:exon

gpr12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: gpr12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 12
translation: MNEGLQANVSWRLDRASENVSTAVSSLDPILNADPQPIVNPWDIVLCTSGTVISCENAIVVLIIFHNPSLRAPMFLLIGSLALADLLAGLGLVINFIFTYLLQSDSAKLVTLGLVVASFSASVCSLLAITIDRYLSLYYALTYNSERTVTFTYVMLVVLWGTSICLGLLPVMGWNCLQDESTCSIIRPLTKNNVASLSVSFLLMFGLMLQLYVQICKIVMRHAHQIALQHHFLATSHYVTTRKGVSTLAIILGTFAACWMPFTLYSLIADYTYPSIYTYATLLPASYNSIINPVIYAFRNQEIQKALWLICCGCIPASVSQRARSPSDV
SIO_010081: gpr12
subclass of: SO_0000673
so part of: gpr12
location: complement(1162714..1163703)
location: region:1162714-1163703:-1
so has part: feature:1162714-1163703:-1:exon

XP_041089172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1162714-1163703:-1:exon

usp12a
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: usp12a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1195829..1217478)
location: region:1195829-1217478:-1
so has part: feature:1195829-1217478:-1:exon
subclass of: SO_0000010

121302905
type: Gene
SIO_000068: ncbigene

position:1195829:-1
position: 1195829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217478:-1
position: 1217478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1195829-1217478:-1:exon

usp12a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: usp12a
product: ubiquitin specific peptidase 12a, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041233236.1
SIO_010081: usp12a
subclass of: SO_0000673
so part of: usp12a
location: complement(join(1195829..1199832,1200258..1200336,1201604..1201801,1202351..1202434,1203486..1203562,1205879..1206108,1209394..1209607,1210544..1210624,1217089..1217478))
location: region:1195829-1217478:-1
so has part: feature:1217089-1217478:-1:exon
so has part: feature:1210544-1210624:-1:exon
so has part: feature:1209394-1209607:-1:exon
so has part: feature:1205879-1206108:-1:exon
so has part: feature:1203486-1203562:-1:exon
so has part: feature:1202351-1202434:-1:exon
so has part: feature:1201604-1201801:-1:exon
so has part: feature:1200258-1200336:-1:exon
so has part: feature:1195829-1199832:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1217089-1217478:-1:exon

position:1217089:-1
position: 1217089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1210544-1210624:-1:exon

position:1210544:-1
position: 1210544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210624:-1
position: 1210624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1209394-1209607:-1:exon

position:1209394:-1
position: 1209394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209607:-1
position: 1209607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1205879-1206108:-1:exon

position:1205879:-1
position: 1205879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206108:-1
position: 1206108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1203486-1203562:-1:exon

position:1203486:-1
position: 1203486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203562:-1
position: 1203562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1202351-1202434:-1:exon

position:1202351:-1
position: 1202351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202434:-1
position: 1202434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1201604-1201801:-1:exon

position:1201604:-1
position: 1201604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201801:-1
position: 1201801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1200258-1200336:-1:exon

position:1200258:-1
position: 1200258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200336:-1
position: 1200336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1195829-1199832:-1:exon

position:1199832:-1
position: 1199832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

usp12a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: usp12a
product: ubiquitin specific peptidase 12a, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041233235.1
SIO_010081: usp12a
subclass of: SO_0000673
so part of: usp12a
location: complement(join(1195829..1199832,1200258..1200336,1201604..1201801,1202351..1202434,1203486..1203562,1205879..1206108,1209394..1209607,1210544..1210624,1210851..1210941))
location: region:1195829-1210941:-1
so has part: feature:1210851-1210941:-1:exon
so has part: feature:1210544-1210624:-1:exon
so has part: feature:1209394-1209607:-1:exon
so has part: feature:1205879-1206108:-1:exon
so has part: feature:1203486-1203562:-1:exon
so has part: feature:1202351-1202434:-1:exon
so has part: feature:1201604-1201801:-1:exon
so has part: feature:1200258-1200336:-1:exon
so has part: feature:1195829-1199832:-1:exon

position:1210941:-1
position: 1210941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1210851-1210941:-1:exon

position:1210851:-1
position: 1210851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1210544-1210624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1209394-1209607:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1205879-1206108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1203486-1203562:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1202351-1202434:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1201604-1201801:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1200258-1200336:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1195829-1199832:-1:exon

usp12a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: usp12a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 12A isoform X2
translation: MEILMTVSKIASICTMGTNASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLGYKSQPRKKENLLTCLSDLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEEKQQEKQNGRLPNGNLDSENNNSLPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRHTKLSYRVVFPLELRLFNTSGDATNPERLYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYILFYQSRD
SIO_010081: usp12a
subclass of: SO_0000673
so part of: usp12a
location: complement(join(1199731..1199832,1200258..1200336,1201604..1201801,1202351..1202434,1203486..1203562,1205879..1206108,1209394..1209607,1210544..1210624,1217089..1217136))
location: region:1199731-1217136:-1
so has part: feature:1217089-1217136:-1:exon
so has part: feature:1210544-1210624:-1:exon
so has part: feature:1209394-1209607:-1:exon
so has part: feature:1205879-1206108:-1:exon
so has part: feature:1203486-1203562:-1:exon
so has part: feature:1202351-1202434:-1:exon
so has part: feature:1201604-1201801:-1:exon
so has part: feature:1200258-1200336:-1:exon
so has part: feature:1199731-1199832:-1:exon

XP_041089170.1
type: Protein
SIO_000068: ncbiprotein

position:1199731:-1
position: 1199731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217136:-1
position: 1217136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217089-1217136:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1210544-1210624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1209394-1209607:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1205879-1206108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1203486-1203562:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1202351-1202434:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1201604-1201801:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1200258-1200336:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1199731-1199832:-1:exon

usp12a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: usp12a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 12A isoform X1
translation: MLNQAFHCIKSICSSSTVGTNASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLGYKSQPRKKENLLTCLSDLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEEKQQEKQNGRLPNGNLDSENNNSLPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRHTKLSYRVVFPLELRLFNTSGDATNPERLYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYILFYQSRD
SIO_010081: usp12a
subclass of: SO_0000673
so part of: usp12a
location: complement(join(1199731..1199832,1200258..1200336,1201604..1201801,1202351..1202434,1203486..1203562,1205879..1206108,1209394..1209607,1210544..1210624,1210851..1210904))
location: region:1199731-1210904:-1
so has part: feature:1210851-1210904:-1:exon
so has part: feature:1210544-1210624:-1:exon
so has part: feature:1209394-1209607:-1:exon
so has part: feature:1205879-1206108:-1:exon
so has part: feature:1203486-1203562:-1:exon
so has part: feature:1202351-1202434:-1:exon
so has part: feature:1201604-1201801:-1:exon
so has part: feature:1200258-1200336:-1:exon
so has part: feature:1199731-1199832:-1:exon

XP_041089169.1
type: Protein
SIO_000068: ncbiprotein

position:1210904:-1
position: 1210904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1210851-1210904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1210544-1210624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1209394-1209607:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1205879-1206108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1203486-1203562:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1202351-1202434:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1201604-1201801:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1200258-1200336:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1199731-1199832:-1:exon

rpl21
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: rpl21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1219267..1223126
location: region:1219267-1223126:1
so has part: feature:1219267-1223126:1:exon
subclass of: SO_0000010

121302929
type: Gene
SIO_000068: ncbigene

position:1219267:1
position: 1219267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223126:1
position: 1223126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1219267-1223126:1:exon

rpl21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: rpl21
product: ribosomal protein L21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041233284.1
SIO_010081: rpl21
subclass of: SO_0000673
so part of: rpl21
location: join(1219267..1219343,1220295..1220373,1220763..1220824,1221166..1221278,1222034..1222184,1222998..1223126)
location: region:1219267-1223126:1
so has part: feature:1219267-1219343:1:exon
so has part: feature:1220295-1220373:1:exon
so has part: feature:1220763-1220824:1:exon
so has part: feature:1221166-1221278:1:exon
so has part: feature:1222034-1222184:1:exon
so has part: feature:1222998-1223126:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1219267-1219343:1:exon

position:1219343:1
position: 1219343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1220295-1220373:1:exon

position:1220295:1
position: 1220295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220373:1
position: 1220373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1220763-1220824:1:exon

position:1220763:1
position: 1220763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220824:1
position: 1220824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1221166-1221278:1:exon

position:1221166:1
position: 1221166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221278:1
position: 1221278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1222034-1222184:1:exon

position:1222034:1
position: 1222034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222184:1
position: 1222184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1222998-1223126:1:exon

position:1222998:1
position: 1222998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rpl21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: rpl21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L21
translation: MTNTRGKRRGTRYMFSRPFRKHGPVPLSTYMRIYKKGDIVDIKGMGTIQKGMPHKCYHGKTGRIYNVTQHAVGIIVNKQIKGKILAKRINVRIEHIKHSKSRDSFLQRVKANEKKKIEAKNNGTWVDLKRQPAAPREAHFVSTKGNVPQLLEPIPYEFMA
SIO_010081: rpl21
subclass of: SO_0000673
so part of: rpl21
location: join(1220307..1220373,1220763..1220824,1221166..1221278,1222034..1222184,1222998..1223087)
location: region:1220307-1223087:1
so has part: feature:1220307-1220373:1:exon
so has part: feature:1220763-1220824:1:exon
so has part: feature:1221166-1221278:1:exon
so has part: feature:1222034-1222184:1:exon
so has part: feature:1222998-1223087:1:exon

XP_041089218.1
type: Protein
SIO_000068: ncbiprotein

position:1220307:1
position: 1220307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223087:1
position: 1223087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1220307-1220373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1220763-1220824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221166-1221278:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1222034-1222184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1222998-1223087:1:exon

LOC121302957
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302957
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1221617..1221749
location: region:1221617-1221749:1
so has part: feature:1221617-1221749:1:exon
subclass of: SO_0000578

121302957
type: Gene
SIO_000068: ncbigene

position:1221617:1
position: 1221617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221749:1
position: 1221749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1221617-1221749:1:exon

LOC121302957
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: snoRNA
gene: LOC121302957
product: small nucleolar RNA SNORA27
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00443
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005947742.1
SIO_010081: LOC121302957
subclass of: SO_0000673
so part of: LOC121302957
location: 1221617..1221749
location: region:1221617-1221749:1
so has part: feature:1221617-1221749:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1221617-1221749:1:exon

LOC121302561
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1226863..1229577
location: region:1226863-1229577:1
so has part: feature:1226863-1229577:1:exon
subclass of: SO_0000010

121302561
type: Gene
SIO_000068: ncbigene

position:1226863:1
position: 1226863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229577:1
position: 1229577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1226863-1229577:1:exon

LOC121302561
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302561
product: ras-like protein family member 11A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_041232561.1
SIO_010081: LOC121302561
subclass of: SO_0000673
so part of: LOC121302561
location: join(1226863..1227271,1228048..1228124,1228430..1229577)
location: region:1226863-1229577:1
so has part: feature:1226863-1227271:1:exon
so has part: feature:1228048-1228124:1:exon
so has part: feature:1228430-1229577:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1226863-1227271:1:exon

position:1227271:1
position: 1227271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1228048-1228124:1:exon

position:1228048:1
position: 1228048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228124:1
position: 1228124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1228430-1229577:1:exon

position:1228430:1
position: 1228430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121302561
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302561
product: ras-like protein family member 11A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041232560.1
SIO_010081: LOC121302561
subclass of: SO_0000673
so part of: LOC121302561
location: join(1226867..1227271,1227845..1227901,1228048..1228124,1228430..1229577)
location: region:1226867-1229577:1
so has part: feature:1226867-1227271:1:exon
so has part: feature:1227845-1227901:1:exon
so has part: feature:1228048-1228124:1:exon
so has part: feature:1228430-1229577:1:exon

position:1226867:1
position: 1226867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1226867-1227271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1227845-1227901:1:exon

position:1227845:1
position: 1227845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227901:1
position: 1227901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1228048-1228124:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1228430-1229577:1:exon

LOC121302561
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-like protein family member 11A isoform X1
translation: MPLTNMSNNFLLAPIPESPDYIINRDIKIAVLGSGGVGKTAMIVRFLTKRFIGDYESNTGNLYSRLVQLEGDQLSIQIQDTPCIQVNGEGVRLPDLASRCIHWADGFILVYSITEYCSHKAIHSLHQHIRKAHPDTKPPVFIVGNKSDLLHARQVQTSEGIQLANELGAVFLEISTSENYEDVSDVFQHLCKEVSKLHSQYINGEKRRASLIPRPKSPNMQDLKRRFKQALSSKAK
SIO_010081: LOC121302561
subclass of: SO_0000673
so part of: LOC121302561
location: join(1227151..1227271,1227845..1227901,1228048..1228124,1228430..1228885)
location: region:1227151-1228885:1
so has part: feature:1227151-1227271:1:exon
so has part: feature:1227845-1227901:1:exon
so has part: feature:1228048-1228124:1:exon
so has part: feature:1228430-1228885:1:exon

XP_041088494.1
type: Protein
SIO_000068: ncbiprotein

position:1227151:1
position: 1227151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228885:1
position: 1228885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1227151-1227271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1227845-1227901:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1228048-1228124:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1228430-1228885:1:exon

LOC121302561
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-like protein family member 11A isoform X2
translation: MPLTNMSNNFLLAPIPESPDYIINRDIKIAVLGSGGVGKTGNLYSRLVQLEGDQLSIQIQDTPCIQVNGEGVRLPDLASRCIHWADGFILVYSITEYCSHKAIHSLHQHIRKAHPDTKPPVFIVGNKSDLLHARQVQTSEGIQLANELGAVFLEISTSENYEDVSDVFQHLCKEVSKLHSQYINGEKRRASLIPRPKSPNMQDLKRRFKQALSSKAK
SIO_010081: LOC121302561
subclass of: SO_0000673
so part of: LOC121302561
location: join(1227151..1227271,1228048..1228124,1228430..1228885)
location: region:1227151-1228885:1
so has part: feature:1227151-1227271:1:exon
so has part: feature:1228048-1228124:1:exon
so has part: feature:1228430-1228885:1:exon

XP_041088495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1227151-1227271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1228048-1228124:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1228430-1228885:1:exon

LOC121302560
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1242912..1245761)
location: region:1242912-1245761:-1
so has part: feature:1242912-1245761:-1:exon
subclass of: SO_0000011

121302560
type: Gene
SIO_000068: ncbigene

position:1242912:-1
position: 1242912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1245761:-1
position: 1245761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1242912-1245761:-1:exon

LOC121302560
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: lncRNA
gene: LOC121302560
product: uncharacterized LOC121302560
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005947713.1
SIO_010081: LOC121302560
subclass of: SO_0000673
so part of: LOC121302560
location: complement(join(1242912..1242982,1244190..1244313,1245634..1245761))
location: region:1242912-1245761:-1
so has part: feature:1245634-1245761:-1:exon
so has part: feature:1244190-1244313:-1:exon
so has part: feature:1242912-1242982:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1245634-1245761:-1:exon

position:1245634:-1
position: 1245634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1244190-1244313:-1:exon

position:1244190:-1
position: 1244190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244313:-1
position: 1244313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1242912-1242982:-1:exon

position:1242982:-1
position: 1242982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gtf3ab
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: gtf3ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1252559..1258190
location: region:1252559-1258190:1
so has part: feature:1252559-1258190:1:exon
subclass of: SO_0000010

121302873
type: Gene
SIO_000068: ncbigene

position:1252559:1
position: 1252559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1258190:1
position: 1258190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1252559-1258190:1:exon

gtf3ab
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: gtf3ab
product: general transcription factor IIIA, b
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041233167.1
SIO_010081: gtf3ab
subclass of: SO_0000673
so part of: gtf3ab
location: join(1252559..1252765,1254023..1254123,1254666..1254762,1255209..1255297,1255906..1255979,1256106..1256189,1256943..1257172,1257517..1257570,1257961..1258190)
location: region:1252559-1258190:1
so has part: feature:1252559-1252765:1:exon
so has part: feature:1254023-1254123:1:exon
so has part: feature:1254666-1254762:1:exon
so has part: feature:1255209-1255297:1:exon
so has part: feature:1255906-1255979:1:exon
so has part: feature:1256106-1256189:1:exon
so has part: feature:1256943-1257172:1:exon
so has part: feature:1257517-1257570:1:exon
so has part: feature:1257961-1258190:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1252559-1252765:1:exon

position:1252765:1
position: 1252765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1254023-1254123:1:exon

position:1254023:1
position: 1254023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254123:1
position: 1254123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1254666-1254762:1:exon

position:1254666:1
position: 1254666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254762:1
position: 1254762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1255209-1255297:1:exon

position:1255209:1
position: 1255209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1255297:1
position: 1255297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1255906-1255979:1:exon

position:1255906:1
position: 1255906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1255979:1
position: 1255979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1256106-1256189:1:exon

position:1256106:1
position: 1256106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1256189:1
position: 1256189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1256943-1257172:1:exon

position:1256943:1
position: 1256943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1257172:1
position: 1257172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1257517-1257570:1:exon

position:1257517:1
position: 1257517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1257570:1
position: 1257570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1257961-1258190:1:exon

position:1257961:1
position: 1257961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gtf3ab
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: gtf3ab
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor IIIA, b
translation: MEGECSSWVLPSCFVVPRAGYVMGETVKVPVKNFICSFEDCDATFNKSWKLQAHLCKHTGEKPFVCEREGCGKGFSRNFHLARHQLSHSGDKPFQCESDGCKDMFTTKANLKKHIIRKHENQNKLYVCVHSGCGKSFKKNNQLKIHEYEHTNLLPFKCNFEGCEKRFPVPSKLKRHEKVHEGYPCKKEGCSFVGKTWTEYLKHHSHDHQDVFLCDQCNKKFKKAWFLKQHQKVHLPERVVLKCPREGCDRTYTTSFNLQNHILSFHEEKRPFKCERSDCQKSFAMKQSLDRHAVAHDPQKQKLKKRPRPKRSLASRLSGYKPSKRGQPESNSNTMTKMLEKTNLSEQSL
SIO_010081: gtf3ab
subclass of: SO_0000673
so part of: gtf3ab
location: join(1252583..1252765,1254023..1254123,1254666..1254762,1255209..1255297,1255906..1255979,1256106..1256189,1256943..1257172,1257517..1257570,1257961..1258098)
location: region:1252583-1258098:1
so has part: feature:1252583-1252765:1:exon
so has part: feature:1254023-1254123:1:exon
so has part: feature:1254666-1254762:1:exon
so has part: feature:1255209-1255297:1:exon
so has part: feature:1255906-1255979:1:exon
so has part: feature:1256106-1256189:1:exon
so has part: feature:1256943-1257172:1:exon
so has part: feature:1257517-1257570:1:exon
so has part: feature:1257961-1258098:1:exon

XP_041089101.1
type: Protein
SIO_000068: ncbiprotein

position:1252583:1
position: 1252583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1258098:1
position: 1258098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1252583-1252765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1254023-1254123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1254666-1254762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1255209-1255297:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1255906-1255979:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1256106-1256189:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1256943-1257172:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1257517-1257570:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1257961-1258098:1:exon

mtif3
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: mtif3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1258143..1260939)
location: region:1258143-1260939:-1
so has part: feature:1258143-1260939:-1:exon
subclass of: SO_0000010

121302874
type: Gene
SIO_000068: ncbigene

position:1258143:-1
position: 1258143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1260939:-1
position: 1260939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1258143-1260939:-1:exon

mtif3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: mtif3
product: mitochondrial translational initiation factor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041233168.1
SIO_010081: mtif3
subclass of: SO_0000673
so part of: mtif3
location: complement(join(1258143..1258430,1258806..1258954,1259500..1260008,1260649..1260939))
location: region:1258143-1260939:-1
so has part: feature:1260649-1260939:-1:exon
so has part: feature:1259500-1260008:-1:exon
so has part: feature:1258806-1258954:-1:exon
so has part: feature:1258143-1258430:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1260649-1260939:-1:exon

position:1260649:-1
position: 1260649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1259500-1260008:-1:exon

position:1259500:-1
position: 1259500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1260008:-1
position: 1260008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1258806-1258954:-1:exon

position:1258806:-1
position: 1258806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1258954:-1
position: 1258954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1258143-1258430:-1:exon

position:1258430:-1
position: 1258430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mtif3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: mtif3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-3, mitochondrial
translation: MAAGCLRRVVCQGLRNESRLPGFFCVPRPLSTLSIHTYRKAAVNKLRLVLPCPNEGSWVVRTGTRPLTTEDDDDEGGPEGKKKKQDPRARKTIGSVGRKIHHRIIQVINEDGENLGSMHRAGVLRMLDERGLKLVPLRENADPPVYRLMSGKQIHQEQLKLREKQKEKAGPTQVKELTFSSDIAKHDLETKVKQIQQWIEKRHHVRLTVRKGSASVEKMEGVLEEIVQSMPDLATFVTKPKAIKDGRAAMGILRHLSEKELNEYKKQLKQKEQESKGPRQEARDVVNPENTQTKVLHQ
SIO_010081: mtif3
subclass of: SO_0000673
so part of: mtif3
location: complement(join(1258191..1258430,1258806..1258954,1259500..1260007))
location: region:1258191-1260007:-1
so has part: feature:1259500-1260007:-1:exon
so has part: feature:1258806-1258954:-1:exon
so has part: feature:1258191-1258430:-1:exon

XP_041089102.1
type: Protein
SIO_000068: ncbiprotein

position:1258191:-1
position: 1258191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1260007:-1
position: 1260007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259500-1260007:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1258806-1258954:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1258191-1258430:-1:exon

lnx2a
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: lnx2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1278645..1321664)
location: region:1278645-1321664:-1
so has part: feature:1278645-1321664:-1:exon
subclass of: SO_0000010

121302879
type: Gene
SIO_000068: ncbigene

position:1278645:-1
position: 1278645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1321664:-1
position: 1321664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1278645-1321664:-1:exon

lnx2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: lnx2a
product: ligand of numb-protein X 2a, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041233175.1
SIO_010081: lnx2a
subclass of: SO_0000673
so part of: lnx2a
location: complement(join(1278645..1280156,1280532..1280690,1282921..1283152,1284599..1284776,1287224..1287397,1288874..1289245,1289682..1289881,1296181..1296431,1299183..1299724,1321565..1321664))
location: region:1278645-1321664:-1
so has part: feature:1321565-1321664:-1:exon
so has part: feature:1299183-1299724:-1:exon
so has part: feature:1296181-1296431:-1:exon
so has part: feature:1289682-1289881:-1:exon
so has part: feature:1288874-1289245:-1:exon
so has part: feature:1287224-1287397:-1:exon
so has part: feature:1284599-1284776:-1:exon
so has part: feature:1282921-1283152:-1:exon
so has part: feature:1280532-1280690:-1:exon
so has part: feature:1278645-1280156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1321565-1321664:-1:exon

position:1321565:-1
position: 1321565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1299183-1299724:-1:exon

position:1299183:-1
position: 1299183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1299724:-1
position: 1299724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1296181-1296431:-1:exon

position:1296181:-1
position: 1296181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296431:-1
position: 1296431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1289682-1289881:-1:exon

position:1289682:-1
position: 1289682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1289881:-1
position: 1289881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1288874-1289245:-1:exon

position:1288874:-1
position: 1288874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1289245:-1
position: 1289245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1287224-1287397:-1:exon

position:1287224:-1
position: 1287224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287397:-1
position: 1287397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1284599-1284776:-1:exon

position:1284599:-1
position: 1284599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284776:-1
position: 1284776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1282921-1283152:-1:exon

position:1282921:-1
position: 1282921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283152:-1
position: 1283152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1280532-1280690:-1:exon

position:1280532:-1
position: 1280532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280690:-1
position: 1280690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1278645-1280156:-1:exon

position:1280156:-1
position: 1280156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lnx2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: lnx2a
product: ligand of numb-protein X 2a, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_041233177.1
SIO_010081: lnx2a
subclass of: SO_0000673
so part of: lnx2a
location: complement(join(1278645..1280156,1282921..1283152,1284599..1284776,1287224..1287397,1288874..1289245,1289682..1289881,1291110..1291250,1296181..1296431,1299183..1299724,1321565..1321664))
location: region:1278645-1321664:-1
so has part: feature:1321565-1321664:-1:exon
so has part: feature:1299183-1299724:-1:exon
so has part: feature:1296181-1296431:-1:exon
so has part: feature:1291110-1291250:-1:exon
so has part: feature:1289682-1289881:-1:exon
so has part: feature:1288874-1289245:-1:exon
so has part: feature:1287224-1287397:-1:exon
so has part: feature:1284599-1284776:-1:exon
so has part: feature:1282921-1283152:-1:exon
so has part: feature:1278645-1280156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1321565-1321664:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299183-1299724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1296181-1296431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1291110-1291250:-1:exon

position:1291110:-1
position: 1291110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291250:-1
position: 1291250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1289682-1289881:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288874-1289245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1287224-1287397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1284599-1284776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1282921-1283152:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1278645-1280156:-1:exon

lnx2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: lnx2a
product: ligand of numb-protein X 2a, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_041233174.1
SIO_010081: lnx2a
subclass of: SO_0000673
so part of: lnx2a
location: complement(join(1278645..1280156,1280532..1280690,1282921..1283152,1284599..1284776,1287224..1287397,1288874..1289245,1289682..1289881,1291110..1291250,1296181..1296431,1299183..1299724,1321565..1321664))
location: region:1278645-1321664:-1
so has part: feature:1321565-1321664:-1:exon
so has part: feature:1299183-1299724:-1:exon
so has part: feature:1296181-1296431:-1:exon
so has part: feature:1291110-1291250:-1:exon
so has part: feature:1289682-1289881:-1:exon
so has part: feature:1288874-1289245:-1:exon
so has part: feature:1287224-1287397:-1:exon
so has part: feature:1284599-1284776:-1:exon
so has part: feature:1282921-1283152:-1:exon
so has part: feature:1280532-1280690:-1:exon
so has part: feature:1278645-1280156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1321565-1321664:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299183-1299724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1296181-1296431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1291110-1291250:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1289682-1289881:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288874-1289245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1287224-1287397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1284599-1284776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1282921-1283152:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1280532-1280690:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1278645-1280156:-1:exon

lnx2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: lnx2a
product: ligand of numb-protein X 2a, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_041233180.1
SIO_010081: lnx2a
subclass of: SO_0000673
so part of: lnx2a
location: complement(join(1278645..1280156,1280532..1280690,1282921..1283152,1284599..1284776,1287224..1287397,1288874..1289245,1289682..1289881,1291110..1291250,1296181..1296431,1299183..1299724,1305072..1305166,1321565..1321646))
location: region:1278645-1321646:-1
so has part: feature:1321565-1321646:-1:exon
so has part: feature:1305072-1305166:-1:exon
so has part: feature:1299183-1299724:-1:exon
so has part: feature:1296181-1296431:-1:exon
so has part: feature:1291110-1291250:-1:exon
so has part: feature:1289682-1289881:-1:exon
so has part: feature:1288874-1289245:-1:exon
so has part: feature:1287224-1287397:-1:exon
so has part: feature:1284599-1284776:-1:exon
so has part: feature:1282921-1283152:-1:exon
so has part: feature:1280532-1280690:-1:exon
so has part: feature:1278645-1280156:-1:exon

position:1321646:-1
position: 1321646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1321565-1321646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1305072-1305166:-1:exon

position:1305072:-1
position: 1305072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305166:-1
position: 1305166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1299183-1299724:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1296181-1296431:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1291110-1291250:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1289682-1289881:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1288874-1289245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1287224-1287397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1284599-1284776:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1282921-1283152:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1280532-1280690:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1278645-1280156:-1:exon

lnx2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: lnx2a
product: ligand of numb-protein X 2a, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_041233176.1
SIO_010081: lnx2a
subclass of: SO_0000673
so part of: lnx2a
location: complement(join(1278645..1280156,1280532..1280690,1282921..1283152,1284599..1284776,1287224..1287397,1288874..1289245,1289682..1289881,1291110..1291250,1296181..1296431,1299183..1299724,1320539..1320561))
location: region:1278645-1320561:-1
so has part: feature:1320539-1320561:-1:exon
so has part: feature:1299183-1299724:-1:exon
so has part: feature:1296181-1296431:-1:exon
so has part: feature:1291110-1291250:-1:exon
so has part: feature:1289682-1289881:-1:exon
so has part: feature:1288874-1289245:-1:exon
so has part: feature:1287224-1287397:-1:exon
so has part: feature:1284599-1284776:-1:exon
so has part: feature:1282921-1283152:-1:exon
so has part: feature:1280532-1280690:-1:exon
so has part: feature:1278645-1280156:-1:exon

position:1320561:-1
position: 1320561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1320539-1320561:-1:exon

position:1320539:-1
position: 1320539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1299183-1299724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1296181-1296431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1291110-1291250:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1289682-1289881:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288874-1289245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1287224-1287397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1284599-1284776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1282921-1283152:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1280532-1280690:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1278645-1280156:-1:exon

lnx2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: lnx2a
product: ligand of numb-protein X 2a, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_041233179.1
SIO_010081: lnx2a
subclass of: SO_0000673
so part of: lnx2a
location: complement(join(1278645..1280156,1280532..1280690,1282921..1283152,1284599..1284776,1287224..1287397,1288874..1289245,1289682..1289881,1291110..1291250,1296181..1296431,1299183..1299724,1303282..1303761))
location: region:1278645-1303761:-1
so has part: feature:1303282-1303761:-1:exon
so has part: feature:1299183-1299724:-1:exon
so has part: feature:1296181-1296431:-1:exon
so has part: feature:1291110-1291250:-1:exon
so has part: feature:1289682-1289881:-1:exon
so has part: feature:1288874-1289245:-1:exon
so has part: feature:1287224-1287397:-1:exon
so has part: feature:1284599-1284776:-1:exon
so has part: feature:1282921-1283152:-1:exon
so has part: feature:1280532-1280690:-1:exon
so has part: feature:1278645-1280156:-1:exon

position:1303761:-1
position: 1303761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1303282-1303761:-1:exon

position:1303282:-1
position: 1303282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1299183-1299724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1296181-1296431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1291110-1291250:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1289682-1289881:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288874-1289245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1287224-1287397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1284599-1284776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1282921-1283152:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1280532-1280690:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1278645-1280156:-1:exon

lnx2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: lnx2a
product: ligand of numb-protein X 2a, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_041233178.1
SIO_010081: lnx2a
subclass of: SO_0000673
so part of: lnx2a
location: complement(join(1278645..1280156,1280532..1280690,1282921..1283152,1284599..1284776,1287224..1287397,1288874..1289245,1289682..1289881,1291110..1291250,1296181..1296431,1299183..1299724,1301660..1301838))
location: region:1278645-1301838:-1
so has part: feature:1301660-1301838:-1:exon
so has part: feature:1299183-1299724:-1:exon
so has part: feature:1296181-1296431:-1:exon
so has part: feature:1291110-1291250:-1:exon
so has part: feature:1289682-1289881:-1:exon
so has part: feature:1288874-1289245:-1:exon
so has part: feature:1287224-1287397:-1:exon
so has part: feature:1284599-1284776:-1:exon
so has part: feature:1282921-1283152:-1:exon
so has part: feature:1280532-1280690:-1:exon
so has part: feature:1278645-1280156:-1:exon

position:1301838:-1
position: 1301838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1301660-1301838:-1:exon

position:1301660:-1
position: 1301660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1299183-1299724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1296181-1296431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1291110-1291250:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1289682-1289881:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288874-1289245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1287224-1287397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1284599-1284776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1282921-1283152:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1280532-1280690:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1278645-1280156:-1:exon

lnx2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: lnx2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ligand of Numb protein X 2a isoform X4
translation: MRKDLAASQPQNYDTVASSQAQPSTVRLINGWLRTFPSIVATGDCRIVPKWTGAGGCSMGTTNGDAVPVEQDPSLNPLCFECGQQHWTRENHLYNYQHEVDDDLVCHICLQPLFLPLDTPCGHTFCSKCLRNFLQEKDFCPLDRKKLHFKLCKKSSILVHKLLDKLVISCPFTSACPDVMQRCDLEAHLKHRCPGAACHRAGLERRRSGRLQQQQQQAEPGEDSRTMATDPADPAVLPDPKLPTGGSASSATALPMWADEHGLDNPAFEESNEEDSAHQVDCCPARAKRPLSSSCIHLHRTNSTNSASWDFREEIGALGTEEASPKLPSLPEGEITTIEIQRSNPYMELGISIVGGNETPLINVVIQEVYRDGIIARDGRLLAGDQILQVNSVDISNVPHNLARATLSQPCPTLHLTVLRERRFGSRLHGPPPAPDSPRDDSLRVTLHKRGSNEQLGIKLVRRTDEPGVFILDLLEGGLASQDGRLCSNDRVLAINGHNLRHGTPELAAQIIQASGERVHLVVCRAGKQPPPPPPLPSTNAVREAGCHTGTHQPHSTSPATLHHSRPSTHRDLSQCVTCQEKQIHVTKEPHESLGMTVAGGRGSKSGELPIFVTSVQPHGCLSRDGRIKRGDVLLSINGIDLTKLSHSEAVATLKASAASPGVLLQALEVQSVEEQGQATQELLSTSQENEYDASWSPSWVMWLGLPSSVHSCHDIVLRRSHLGSWGFSIVGGYEENHANQPFFIKTIVLGTPAYYDGRLKCGDMIVAVNGLSTVGMSHSALVPMLKEQRNKVVLTVVSWPGSLL
SIO_010081: lnx2a
subclass of: SO_0000673
so part of: lnx2a
location: complement(join(1280021..1280156,1280532..1280690,1282921..1283152,1284599..1284776,1287224..1287397,1288874..1289245,1289682..1289881,1291110..1291250,1296181..1296431,1299183..1299724,1301660..1301692))
location: region:1280021-1301692:-1
so has part: feature:1301660-1301692:-1:exon
so has part: feature:1299183-1299724:-1:exon
so has part: feature:1296181-1296431:-1:exon
so has part: feature:1291110-1291250:-1:exon
so has part: feature:1289682-1289881:-1:exon
so has part: feature:1288874-1289245:-1:exon
so has part: feature:1287224-1287397:-1:exon
so has part: feature:1284599-1284776:-1:exon
so has part: feature:1282921-1283152:-1:exon
so has part: feature:1280532-1280690:-1:exon
so has part: feature:1280021-1280156:-1:exon

XP_041089112.1
type: Protein
SIO_000068: ncbiprotein

position:1280021:-1
position: 1280021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301692:-1
position: 1301692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1301660-1301692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299183-1299724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1296181-1296431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1291110-1291250:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1289682-1289881:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288874-1289245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1287224-1287397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1284599-1284776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1282921-1283152:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1280532-1280690:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1280021-1280156:-1:exon

lnx2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: lnx2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ligand of Numb protein X 2a isoform X2
translation: MGTTNGDAVPVEQDPSLNPLCFECGQQHWTRENHLYNYQHEVDDDLVCHICLQPLFLPLDTPCGHTFCSKCLRNFLQEKDFCPLDRKKLHFKLCKKSSILVHKLLDKLVISCPFTSACPDVMQRCDLEAHLKHRCPGAACHRAGLERRRSGRLQQQQQQAEPGEDSRTMATDPADPAVLPDPKLPTGGSASSATALPMWADEHGLDNPAFEESNEEDTSPKLPSLPEGEITTIEIQRSNPYMELGISIVGGNETPLINVVIQEVYRDGIIARDGRLLAGDQILQVNSVDISNVPHNLARATLSQPCPTLHLTVLRERRFGSRLHGPPPAPDSPRDDSLRVTLHKRGSNEQLGIKLVRRTDEPGVFILDLLEGGLASQDGRLCSNDRVLAINGHNLRHGTPELAAQIIQASGERVHLVVCRAGKQPPPPPPLPSTNAVREAGCHTGTHQPHSTSPATLHHSRPSTHRDLSQCVTCQEKQIHVTKEPHESLGMTVAGGRGSKSGELPIFVTSVQPHGCLSRDGRIKRGDVLLSINGIDLTKLSHSEAVATLKASAASPGVLLQALEVQSVEEQGQATQELLSTSQENEYDASWSPSWVMWLGLPSSVHSCHDIVLRRSHLGSWGFSIVGGYEENHANQPFFIKTIVLGTPAYYDGRLKCGDMIVAVNGLSTVGMSHSALVPMLKEQRNKVVLTVVSWPGSLL
SIO_010081: lnx2a
subclass of: SO_0000673
so part of: lnx2a
location: complement(join(1280021..1280156,1280532..1280690,1282921..1283152,1284599..1284776,1287224..1287397,1288874..1289245,1289682..1289881,1296181..1296431,1299183..1299583))
location: region:1280021-1299583:-1
so has part: feature:1299183-1299583:-1:exon
so has part: feature:1296181-1296431:-1:exon
so has part: feature:1289682-1289881:-1:exon
so has part: feature:1288874-1289245:-1:exon
so has part: feature:1287224-1287397:-1:exon
so has part: feature:1284599-1284776:-1:exon
so has part: feature:1282921-1283152:-1:exon
so has part: feature:1280532-1280690:-1:exon
so has part: feature:1280021-1280156:-1:exon

XP_041089109.1
type: Protein
SIO_000068: ncbiprotein

position:1299583:-1
position: 1299583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1299183-1299583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1296181-1296431:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1289682-1289881:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288874-1289245:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1287224-1287397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1284599-1284776:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1282921-1283152:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1280532-1280690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1280021-1280156:-1:exon

lnx2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: lnx2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ligand of Numb protein X 2a isoform X3
translation: MGTTNGDAVPVEQDPSLNPLCFECGQQHWTRENHLYNYQHEVDDDLVCHICLQPLFLPLDTPCGHTFCSKCLRNFLQEKDFCPLDRKKLHFKLCKKSSILVHKLLDKLVISCPFTSACPDVMQRCDLEAHLKHRCPGAACHRAGLERRRSGRLQQQQQQAEPGEDSRTMATDPADPAVLPDPKLPTGGSASSATALPMWADEHGLDNPAFEESNEEDSAHQVDCCPARAKRPLSSSCIHLHRTNSTNSASWDFREEIGALGTEEASPKLPSLPEGEITTIEIQRSNPYMELGISIVGGNETPLINVVIQEVYRDGIIARDGRLLAGDQILQVNSVDISNVPHNLARATLSQPCPTLHLTVLRERRFGSRLHGPPPAPDSPRDDSLRVTLHKRGSNEQLGIKLVRRTDEPGVFILDLLEGGLASQDGRLCSNDRVLAINGHNLRHGTPELAAQIIQASGERVHLVVCRAGKQPPPPPPLPSTNAVREAGCHTGTHQPHSTSPATLHHSRPSTHRDLSQCVTCQEKQIHVTKEPHESLGMTVAGGRGSKSGELPIFVTSVQPHGCLSRDGRIKRGDVLLSINGIDLTKLSHSEAVATLKASAASPGVLLQALEVQSVEEQGQATQELLSTSQENEYDASWSPSWVMWLGLPRCGDMIVAVNGLSTVGMSHSALVPMLKEQRNKVVLTVVSWPGSLL
SIO_010081: lnx2a
subclass of: SO_0000673
so part of: lnx2a
location: complement(join(1280021..1280156,1282921..1283152,1284599..1284776,1287224..1287397,1288874..1289245,1289682..1289881,1291110..1291250,1296181..1296431,1299183..1299583))
location: region:1280021-1299583:-1
so has part: feature:1299183-1299583:-1:exon
so has part: feature:1296181-1296431:-1:exon
so has part: feature:1291110-1291250:-1:exon
so has part: feature:1289682-1289881:-1:exon
so has part: feature:1288874-1289245:-1:exon
so has part: feature:1287224-1287397:-1:exon
so has part: feature:1284599-1284776:-1:exon
so has part: feature:1282921-1283152:-1:exon
so has part: feature:1280021-1280156:-1:exon

XP_041089111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1299183-1299583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1296181-1296431:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291110-1291250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1289682-1289881:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288874-1289245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1287224-1287397:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1284599-1284776:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1282921-1283152:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1280021-1280156:-1:exon

lnx2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: lnx2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ligand of Numb protein X 2a isoform X1
translation: MGTTNGDAVPVEQDPSLNPLCFECGQQHWTRENHLYNYQHEVDDDLVCHICLQPLFLPLDTPCGHTFCSKCLRNFLQEKDFCPLDRKKLHFKLCKKSSILVHKLLDKLVISCPFTSACPDVMQRCDLEAHLKHRCPGAACHRAGLERRRSGRLQQQQQQAEPGEDSRTMATDPADPAVLPDPKLPTGGSASSATALPMWADEHGLDNPAFEESNEEDSAHQVDCCPARAKRPLSSSCIHLHRTNSTNSASWDFREEIGALGTEEASPKLPSLPEGEITTIEIQRSNPYMELGISIVGGNETPLINVVIQEVYRDGIIARDGRLLAGDQILQVNSVDISNVPHNLARATLSQPCPTLHLTVLRERRFGSRLHGPPPAPDSPRDDSLRVTLHKRGSNEQLGIKLVRRTDEPGVFILDLLEGGLASQDGRLCSNDRVLAINGHNLRHGTPELAAQIIQASGERVHLVVCRAGKQPPPPPPLPSTNAVREAGCHTGTHQPHSTSPATLHHSRPSTHRDLSQCVTCQEKQIHVTKEPHESLGMTVAGGRGSKSGELPIFVTSVQPHGCLSRDGRIKRGDVLLSINGIDLTKLSHSEAVATLKASAASPGVLLQALEVQSVEEQGQATQELLSTSQENEYDASWSPSWVMWLGLPSSVHSCHDIVLRRSHLGSWGFSIVGGYEENHANQPFFIKTIVLGTPAYYDGRLKCGDMIVAVNGLSTVGMSHSALVPMLKEQRNKVVLTVVSWPGSLL
SIO_010081: lnx2a
subclass of: SO_0000673
so part of: lnx2a
location: complement(join(1280021..1280156,1280532..1280690,1282921..1283152,1284599..1284776,1287224..1287397,1288874..1289245,1289682..1289881,1291110..1291250,1296181..1296431,1299183..1299583))
location: region:1280021-1299583:-1
so has part: feature:1299183-1299583:-1:exon
so has part: feature:1296181-1296431:-1:exon
so has part: feature:1291110-1291250:-1:exon
so has part: feature:1289682-1289881:-1:exon
so has part: feature:1288874-1289245:-1:exon
so has part: feature:1287224-1287397:-1:exon
so has part: feature:1284599-1284776:-1:exon
so has part: feature:1282921-1283152:-1:exon
so has part: feature:1280532-1280690:-1:exon
so has part: feature:1280021-1280156:-1:exon

XP_041089108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1299183-1299583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1296181-1296431:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291110-1291250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1289682-1289881:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288874-1289245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1287224-1287397:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1284599-1284776:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1282921-1283152:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1280532-1280690:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1280021-1280156:-1:exon

lnx2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: lnx2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ligand of Numb protein X 2a isoform X1
translation: MGTTNGDAVPVEQDPSLNPLCFECGQQHWTRENHLYNYQHEVDDDLVCHICLQPLFLPLDTPCGHTFCSKCLRNFLQEKDFCPLDRKKLHFKLCKKSSILVHKLLDKLVISCPFTSACPDVMQRCDLEAHLKHRCPGAACHRAGLERRRSGRLQQQQQQAEPGEDSRTMATDPADPAVLPDPKLPTGGSASSATALPMWADEHGLDNPAFEESNEEDSAHQVDCCPARAKRPLSSSCIHLHRTNSTNSASWDFREEIGALGTEEASPKLPSLPEGEITTIEIQRSNPYMELGISIVGGNETPLINVVIQEVYRDGIIARDGRLLAGDQILQVNSVDISNVPHNLARATLSQPCPTLHLTVLRERRFGSRLHGPPPAPDSPRDDSLRVTLHKRGSNEQLGIKLVRRTDEPGVFILDLLEGGLASQDGRLCSNDRVLAINGHNLRHGTPELAAQIIQASGERVHLVVCRAGKQPPPPPPLPSTNAVREAGCHTGTHQPHSTSPATLHHSRPSTHRDLSQCVTCQEKQIHVTKEPHESLGMTVAGGRGSKSGELPIFVTSVQPHGCLSRDGRIKRGDVLLSINGIDLTKLSHSEAVATLKASAASPGVLLQALEVQSVEEQGQATQELLSTSQENEYDASWSPSWVMWLGLPSSVHSCHDIVLRRSHLGSWGFSIVGGYEENHANQPFFIKTIVLGTPAYYDGRLKCGDMIVAVNGLSTVGMSHSALVPMLKEQRNKVVLTVVSWPGSLL
SIO_010081: lnx2a
subclass of: SO_0000673
so part of: lnx2a
location: complement(join(1280021..1280156,1280532..1280690,1282921..1283152,1284599..1284776,1287224..1287397,1288874..1289245,1289682..1289881,1291110..1291250,1296181..1296431,1299183..1299583))
location: region:1280021-1299583:-1
so has part: feature:1299183-1299583:-1:exon
so has part: feature:1296181-1296431:-1:exon
so has part: feature:1291110-1291250:-1:exon
so has part: feature:1289682-1289881:-1:exon
so has part: feature:1288874-1289245:-1:exon
so has part: feature:1287224-1287397:-1:exon
so has part: feature:1284599-1284776:-1:exon
so has part: feature:1282921-1283152:-1:exon
so has part: feature:1280532-1280690:-1:exon
so has part: feature:1280021-1280156:-1:exon

XP_041089110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1299183-1299583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1296181-1296431:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291110-1291250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1289682-1289881:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288874-1289245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1287224-1287397:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1284599-1284776:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1282921-1283152:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1280532-1280690:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1280021-1280156:-1:exon

lnx2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: lnx2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ligand of Numb protein X 2a isoform X1
translation: MGTTNGDAVPVEQDPSLNPLCFECGQQHWTRENHLYNYQHEVDDDLVCHICLQPLFLPLDTPCGHTFCSKCLRNFLQEKDFCPLDRKKLHFKLCKKSSILVHKLLDKLVISCPFTSACPDVMQRCDLEAHLKHRCPGAACHRAGLERRRSGRLQQQQQQAEPGEDSRTMATDPADPAVLPDPKLPTGGSASSATALPMWADEHGLDNPAFEESNEEDSAHQVDCCPARAKRPLSSSCIHLHRTNSTNSASWDFREEIGALGTEEASPKLPSLPEGEITTIEIQRSNPYMELGISIVGGNETPLINVVIQEVYRDGIIARDGRLLAGDQILQVNSVDISNVPHNLARATLSQPCPTLHLTVLRERRFGSRLHGPPPAPDSPRDDSLRVTLHKRGSNEQLGIKLVRRTDEPGVFILDLLEGGLASQDGRLCSNDRVLAINGHNLRHGTPELAAQIIQASGERVHLVVCRAGKQPPPPPPLPSTNAVREAGCHTGTHQPHSTSPATLHHSRPSTHRDLSQCVTCQEKQIHVTKEPHESLGMTVAGGRGSKSGELPIFVTSVQPHGCLSRDGRIKRGDVLLSINGIDLTKLSHSEAVATLKASAASPGVLLQALEVQSVEEQGQATQELLSTSQENEYDASWSPSWVMWLGLPSSVHSCHDIVLRRSHLGSWGFSIVGGYEENHANQPFFIKTIVLGTPAYYDGRLKCGDMIVAVNGLSTVGMSHSALVPMLKEQRNKVVLTVVSWPGSLL
SIO_010081: lnx2a
subclass of: SO_0000673
so part of: lnx2a
location: complement(join(1280021..1280156,1280532..1280690,1282921..1283152,1284599..1284776,1287224..1287397,1288874..1289245,1289682..1289881,1291110..1291250,1296181..1296431,1299183..1299583))
location: region:1280021-1299583:-1
so has part: feature:1299183-1299583:-1:exon
so has part: feature:1296181-1296431:-1:exon
so has part: feature:1291110-1291250:-1:exon
so has part: feature:1289682-1289881:-1:exon
so has part: feature:1288874-1289245:-1:exon
so has part: feature:1287224-1287397:-1:exon
so has part: feature:1284599-1284776:-1:exon
so has part: feature:1282921-1283152:-1:exon
so has part: feature:1280532-1280690:-1:exon
so has part: feature:1280021-1280156:-1:exon

XP_041089113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1299183-1299583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1296181-1296431:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291110-1291250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1289682-1289881:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288874-1289245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1287224-1287397:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1284599-1284776:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1282921-1283152:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1280532-1280690:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1280021-1280156:-1:exon

lnx2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: lnx2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ligand of Numb protein X 2a isoform X1
translation: MGTTNGDAVPVEQDPSLNPLCFECGQQHWTRENHLYNYQHEVDDDLVCHICLQPLFLPLDTPCGHTFCSKCLRNFLQEKDFCPLDRKKLHFKLCKKSSILVHKLLDKLVISCPFTSACPDVMQRCDLEAHLKHRCPGAACHRAGLERRRSGRLQQQQQQAEPGEDSRTMATDPADPAVLPDPKLPTGGSASSATALPMWADEHGLDNPAFEESNEEDSAHQVDCCPARAKRPLSSSCIHLHRTNSTNSASWDFREEIGALGTEEASPKLPSLPEGEITTIEIQRSNPYMELGISIVGGNETPLINVVIQEVYRDGIIARDGRLLAGDQILQVNSVDISNVPHNLARATLSQPCPTLHLTVLRERRFGSRLHGPPPAPDSPRDDSLRVTLHKRGSNEQLGIKLVRRTDEPGVFILDLLEGGLASQDGRLCSNDRVLAINGHNLRHGTPELAAQIIQASGERVHLVVCRAGKQPPPPPPLPSTNAVREAGCHTGTHQPHSTSPATLHHSRPSTHRDLSQCVTCQEKQIHVTKEPHESLGMTVAGGRGSKSGELPIFVTSVQPHGCLSRDGRIKRGDVLLSINGIDLTKLSHSEAVATLKASAASPGVLLQALEVQSVEEQGQATQELLSTSQENEYDASWSPSWVMWLGLPSSVHSCHDIVLRRSHLGSWGFSIVGGYEENHANQPFFIKTIVLGTPAYYDGRLKCGDMIVAVNGLSTVGMSHSALVPMLKEQRNKVVLTVVSWPGSLL
SIO_010081: lnx2a
subclass of: SO_0000673
so part of: lnx2a
location: complement(join(1280021..1280156,1280532..1280690,1282921..1283152,1284599..1284776,1287224..1287397,1288874..1289245,1289682..1289881,1291110..1291250,1296181..1296431,1299183..1299583))
location: region:1280021-1299583:-1
so has part: feature:1299183-1299583:-1:exon
so has part: feature:1296181-1296431:-1:exon
so has part: feature:1291110-1291250:-1:exon
so has part: feature:1289682-1289881:-1:exon
so has part: feature:1288874-1289245:-1:exon
so has part: feature:1287224-1287397:-1:exon
so has part: feature:1284599-1284776:-1:exon
so has part: feature:1282921-1283152:-1:exon
so has part: feature:1280532-1280690:-1:exon
so has part: feature:1280021-1280156:-1:exon

XP_041089114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1299183-1299583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1296181-1296431:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291110-1291250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1289682-1289881:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288874-1289245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1287224-1287397:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1284599-1284776:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1282921-1283152:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1280532-1280690:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1280021-1280156:-1:exon

si:ch211-140b10.6
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: si:ch211-140b10.6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1321881..1328418
location: region:1321881-1328418:1
so has part: feature:1321881-1328418:1:exon
subclass of: SO_0000010

121302881
type: Gene
SIO_000068: ncbigene

position:1321881:1
position: 1321881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1328418:1
position: 1328418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1321881-1328418:1:exon

si:ch211-140b10.6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: si:ch211-140b10.6
product: protein POLR1D-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041233181.1
SIO_010081: si:ch211-140b10.6
subclass of: SO_0000673
so part of: si:ch211-140b10.6
location: join(1321881..1322256,1324298..1324372,1327839..1328418)
location: region:1321881-1328418:1
so has part: feature:1321881-1322256:1:exon
so has part: feature:1324298-1324372:1:exon
so has part: feature:1327839-1328418:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1321881-1322256:1:exon

position:1322256:1
position: 1322256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1324298-1324372:1:exon

position:1324298:1
position: 1324298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1324372:1
position: 1324372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1327839-1328418:1:exon

position:1327839:1
position: 1327839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:ch211-140b10.6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: si:ch211-140b10.6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein POLR1D-like
translation: MADEQELEKKAVEELLKEAKRGKVRAETMGPAGWVKCPLRSTNKRFLLNTLRNTFPSRGLGKAKGTGGRNERDSSGSHHTKDRSRKPSYHPYEQEPRSGRERDRSPVRSKESSSDLHRQGSPPRRRDSAALQESSSHREKH
SIO_010081: si:ch211-140b10.6
subclass of: SO_0000673
so part of: si:ch211-140b10.6
location: join(1322231..1322256,1324298..1324372,1327839..1328163)
location: region:1322231-1328163:1
so has part: feature:1322231-1322256:1:exon
so has part: feature:1324298-1324372:1:exon
so has part: feature:1327839-1328163:1:exon

XP_041089115.1
type: Protein
SIO_000068: ncbiprotein

position:1322231:1
position: 1322231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1328163:1
position: 1328163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1322231-1322256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1324298-1324372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1327839-1328163:1:exon

urad
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: urad
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1330251..1333388)
location: region:1330251-1333388:-1
so has part: feature:1330251-1333388:-1:exon
subclass of: SO_0000010

121302699
type: Gene
SIO_000068: ncbigene

position:1330251:-1
position: 1330251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333388:-1
position: 1333388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1330251-1333388:-1:exon

urad
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: urad
product: ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041232787.1
SIO_010081: urad
subclass of: SO_0000673
so part of: urad
location: complement(join(1330251..1330956,1332997..1333388))
location: region:1330251-1333388:-1
so has part: feature:1332997-1333388:-1:exon
so has part: feature:1330251-1330956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1332997-1333388:-1:exon

position:1332997:-1
position: 1332997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1330251-1330956:-1:exon

position:1330956:-1
position: 1330956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urad
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: urad
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase
translation: MDLKTVNSMTCEEFVSVFGNVVERCPLIAAALWSRRPFSSTLELENGFNEFIDSLSIEGKEGILRCHPDLAGRELLAGTLTVESRGEQGGAGLTSLSSADALRMNQLNSQYKEKFGFPFVICARMCDKDRIIQQLESRVRNQQLQELHCGIEEVKSICRLRLQDIYTRAAKSTKL
SIO_010081: urad
subclass of: SO_0000673
so part of: urad
location: complement(join(1330604..1330956,1332997..1333171))
location: region:1330604-1333171:-1
so has part: feature:1332997-1333171:-1:exon
so has part: feature:1330604-1330956:-1:exon

XP_041088721.1
type: Protein
SIO_000068: ncbiprotein

position:1330604:-1
position: 1330604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333171:-1
position: 1333171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1332997-1333171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1330604-1330956:-1:exon

flt3
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: flt3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1333928..1363552)
location: region:1333928-1363552:-1
so has part: feature:1333928-1363552:-1:exon
subclass of: SO_0000010

121302745
type: Gene
SIO_000068: ncbigene

position:1333928:-1
position: 1333928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363552:-1
position: 1363552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1333928-1363552:-1:exon

flt3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: flt3
product: fms related receptor tyrosine kinase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041232902.1
SIO_010081: flt3
subclass of: SO_0000673
so part of: flt3
location: complement(join(1333928..1335954,1337018..1337123,1337855..1337954,1338281..1338392,1338866..1338988,1339471..1339601,1339693..1339814,1339913..1340066,1340943..1341053,1342882..1342986,1343750..1343882,1344269..1344381,1345312..1345505,1346622..1346730,1346834..1346949,1347416..1347572,1348743..1348890,1348996..1349144,1350296..1350465,1351197..1351329,1354267..1354382,1354789..1355012,1355128..1355252,1363404..1363552))
location: region:1333928-1363552:-1
so has part: feature:1363404-1363552:-1:exon
so has part: feature:1355128-1355252:-1:exon
so has part: feature:1354789-1355012:-1:exon
so has part: feature:1354267-1354382:-1:exon
so has part: feature:1351197-1351329:-1:exon
so has part: feature:1350296-1350465:-1:exon
so has part: feature:1348996-1349144:-1:exon
so has part: feature:1348743-1348890:-1:exon
so has part: feature:1347416-1347572:-1:exon
so has part: feature:1346834-1346949:-1:exon
so has part: feature:1346622-1346730:-1:exon
so has part: feature:1345312-1345505:-1:exon
so has part: feature:1344269-1344381:-1:exon
so has part: feature:1343750-1343882:-1:exon
so has part: feature:1342882-1342986:-1:exon
so has part: feature:1340943-1341053:-1:exon
so has part: feature:1339913-1340066:-1:exon
so has part: feature:1339693-1339814:-1:exon
so has part: feature:1339471-1339601:-1:exon
so has part: feature:1338866-1338988:-1:exon
so has part: feature:1338281-1338392:-1:exon
so has part: feature:1337855-1337954:-1:exon
so has part: feature:1337018-1337123:-1:exon
so has part: feature:1333928-1335954:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1363404-1363552:-1:exon

position:1363404:-1
position: 1363404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1355128-1355252:-1:exon

position:1355128:-1
position: 1355128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355252:-1
position: 1355252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1354789-1355012:-1:exon

position:1354789:-1
position: 1354789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355012:-1
position: 1355012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1354267-1354382:-1:exon

position:1354267:-1
position: 1354267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354382:-1
position: 1354382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1351197-1351329:-1:exon

position:1351197:-1
position: 1351197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1351329:-1
position: 1351329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1350296-1350465:-1:exon

position:1350296:-1
position: 1350296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350465:-1
position: 1350465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1348996-1349144:-1:exon

position:1348996:-1
position: 1348996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1349144:-1
position: 1349144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1348743-1348890:-1:exon

position:1348743:-1
position: 1348743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348890:-1
position: 1348890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1347416-1347572:-1:exon

position:1347416:-1
position: 1347416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347572:-1
position: 1347572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1346834-1346949:-1:exon

position:1346834:-1
position: 1346834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346949:-1
position: 1346949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1346622-1346730:-1:exon

position:1346622:-1
position: 1346622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346730:-1
position: 1346730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1345312-1345505:-1:exon

position:1345312:-1
position: 1345312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345505:-1
position: 1345505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1344269-1344381:-1:exon

position:1344269:-1
position: 1344269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344381:-1
position: 1344381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1343750-1343882:-1:exon

position:1343750:-1
position: 1343750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1343882:-1
position: 1343882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1342882-1342986:-1:exon

position:1342882:-1
position: 1342882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1342986:-1
position: 1342986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1340943-1341053:-1:exon

position:1340943:-1
position: 1340943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1341053:-1
position: 1341053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1339913-1340066:-1:exon

position:1339913:-1
position: 1339913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1340066:-1
position: 1340066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1339693-1339814:-1:exon

position:1339693:-1
position: 1339693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1339814:-1
position: 1339814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1339471-1339601:-1:exon

position:1339471:-1
position: 1339471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1339601:-1
position: 1339601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1338866-1338988:-1:exon

position:1338866:-1
position: 1338866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338988:-1
position: 1338988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1338281-1338392:-1:exon

position:1338281:-1
position: 1338281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338392:-1
position: 1338392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1337855-1337954:-1:exon

position:1337855:-1
position: 1337855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1337954:-1
position: 1337954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1337018-1337123:-1:exon

position:1337018:-1
position: 1337018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1337123:-1
position: 1337123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1333928-1335954:-1:exon

position:1335954:-1
position: 1335954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

flt3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: flt3
product: fms related receptor tyrosine kinase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041232903.1
SIO_010081: flt3
subclass of: SO_0000673
so part of: flt3
location: complement(join(1333929..1335954,1337018..1337123,1337855..1337954,1338281..1338392,1338866..1338988,1339471..1339601,1339693..1339814,1339913..1340066,1340943..1341053,1342882..1342986,1343750..1343882,1344269..1344381,1345312..1345505,1346622..1346730,1346834..1346949,1347416..1347572,1348743..1348890,1348996..1349144,1350296..1350465,1351197..1351329,1354267..1354382,1354789..1355009,1355128..1355252,1363404..1363552))
location: region:1333929-1363552:-1
so has part: feature:1363404-1363552:-1:exon
so has part: feature:1355128-1355252:-1:exon
so has part: feature:1354789-1355009:-1:exon
so has part: feature:1354267-1354382:-1:exon
so has part: feature:1351197-1351329:-1:exon
so has part: feature:1350296-1350465:-1:exon
so has part: feature:1348996-1349144:-1:exon
so has part: feature:1348743-1348890:-1:exon
so has part: feature:1347416-1347572:-1:exon
so has part: feature:1346834-1346949:-1:exon
so has part: feature:1346622-1346730:-1:exon
so has part: feature:1345312-1345505:-1:exon
so has part: feature:1344269-1344381:-1:exon
so has part: feature:1343750-1343882:-1:exon
so has part: feature:1342882-1342986:-1:exon
so has part: feature:1340943-1341053:-1:exon
so has part: feature:1339913-1340066:-1:exon
so has part: feature:1339693-1339814:-1:exon
so has part: feature:1339471-1339601:-1:exon
so has part: feature:1338866-1338988:-1:exon
so has part: feature:1338281-1338392:-1:exon
so has part: feature:1337855-1337954:-1:exon
so has part: feature:1337018-1337123:-1:exon
so has part: feature:1333929-1335954:-1:exon

position:1333929:-1
position: 1333929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1363404-1363552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355128-1355252:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1354789-1355009:-1:exon

position:1355009:-1
position: 1355009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1354267-1354382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1351197-1351329:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350296-1350465:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1348996-1349144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1348743-1348890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1347416-1347572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1346834-1346949:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1346622-1346730:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1345312-1345505:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1344269-1344381:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1343750-1343882:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1342882-1342986:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1340943-1341053:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1339913-1340066:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1339693-1339814:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1339471-1339601:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1338866-1338988:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1338281-1338392:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1337855-1337954:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1337018-1337123:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1333929-1335954:-1:exon

flt3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: flt3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein kinase FLT3 isoform X2
translation: MERIGNMLLLFAAASLSMLIEVEGIQTVPQTACFLTLHTKRDSNEEESSLQQQKANSERRKEQIHCPDIQPSDVKNSTSLQEEELANLEVDLFDRIEIQVVMNVTENASCLWEHDNITRHCTVDKARKTYSFLISQANESHAGMHTLSFQYTNVSYSMRFAVRVRTPPTAPLLRVLHREKLGFPCKILCSAESYPEPTIEWILCTESRGSCLKWDGQNKSPLEVADIHGVRKKVNWVYGLDLFQYNDIRCCAENSAGKECSQLHSFELTSWTNPEVADTSVILKTGEAFLLRFKVPKADGPVELSWTSANDTKQKLVPFESESIHIKKVLFEIIYVFLDAVKKEDTGTYSCTSKTRTQSVQLSVVEQGFITLTHEDAIRHIVEGQTVCFTMELFAYPPVRCRWSSAQEPHPCVAKGNSSYTRTYEFCNHHQTPGKYNFYADNKDSRMNRSMLLYKKEKPHVNLKPEFDGEVQCTGEGYPAPEITWWKCGFSDNCSAESSWKKLTEKPRVQVSEGSKFGHKVELHILNMIQVNDEFHIRCCANNTEGWNCDQNPLRLAVSVPKPHVSDQSLYYAALGFCVPALVFIVCLTYYNHKKKPKYESQLKMIQLLGSSDNDYIYIDFSEVEYDQKWEFPRENLEIGKELGSGAFGKVVEATAYGISKPGASVQVAVKMLKEKFQPSEKEALMSELKMMTHIGAHENIVNLLGACTVAGPVYLIFQYCPYGDLLNYLRINREQFHKTLTDVFTQNHFSLYHNFQPDHTVRYGSDSQNGSYIPMHRIRDTAATEESDILLSAGDPALCACHEECDSNYQNTRKNRDEELHVLTFEDLLSFSYQVAKGMEFLTKRNCIHRDLAARNVLVTHEKVVKIGDFGLARDIMNDSNYIVKGNARLPVKWMSPESLFEGVYTVQSDVWSYGILLWEIFSLGVNPYPGIQVDQSFYKLIQNGFKMEQPYYSTESIYQVMQSCWTLDARKRPAFSQIVSFMESQLFDAEVALYQTPPRKDKLSSSCDYKNVTAICSTEEEAMSDTALQTKGTGETVTELGESE
SIO_010081: flt3
subclass of: SO_0000673
so part of: flt3
location: complement(join(1335796..1335954,1337018..1337123,1337855..1337954,1338281..1338392,1338866..1338988,1339471..1339601,1339693..1339814,1339913..1340066,1340943..1341053,1342882..1342986,1343750..1343882,1344269..1344381,1345312..1345505,1346622..1346730,1346834..1346949,1347416..1347572,1348743..1348890,1348996..1349144,1350296..1350465,1351197..1351329,1354267..1354382,1354789..1355009,1355128..1355252,1363404..1363437))
location: region:1335796-1363437:-1
so has part: feature:1363404-1363437:-1:exon
so has part: feature:1355128-1355252:-1:exon
so has part: feature:1354789-1355009:-1:exon
so has part: feature:1354267-1354382:-1:exon
so has part: feature:1351197-1351329:-1:exon
so has part: feature:1350296-1350465:-1:exon
so has part: feature:1348996-1349144:-1:exon
so has part: feature:1348743-1348890:-1:exon
so has part: feature:1347416-1347572:-1:exon
so has part: feature:1346834-1346949:-1:exon
so has part: feature:1346622-1346730:-1:exon
so has part: feature:1345312-1345505:-1:exon
so has part: feature:1344269-1344381:-1:exon
so has part: feature:1343750-1343882:-1:exon
so has part: feature:1342882-1342986:-1:exon
so has part: feature:1340943-1341053:-1:exon
so has part: feature:1339913-1340066:-1:exon
so has part: feature:1339693-1339814:-1:exon
so has part: feature:1339471-1339601:-1:exon
so has part: feature:1338866-1338988:-1:exon
so has part: feature:1338281-1338392:-1:exon
so has part: feature:1337855-1337954:-1:exon
so has part: feature:1337018-1337123:-1:exon
so has part: feature:1335796-1335954:-1:exon

XP_041088837.1
type: Protein
SIO_000068: ncbiprotein

position:1335796:-1
position: 1335796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363437:-1
position: 1363437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1363404-1363437:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355128-1355252:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1354789-1355009:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1354267-1354382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1351197-1351329:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350296-1350465:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1348996-1349144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1348743-1348890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1347416-1347572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1346834-1346949:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1346622-1346730:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1345312-1345505:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1344269-1344381:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1343750-1343882:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1342882-1342986:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1340943-1341053:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1339913-1340066:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1339693-1339814:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1339471-1339601:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1338866-1338988:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1338281-1338392:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1337855-1337954:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1337018-1337123:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1335796-1335954:-1:exon

flt3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: flt3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein kinase FLT3 isoform X1
translation: MERIGNMLLLFAAASLSMLIEVEGIQTVPQTACFLTLHTKRDSNEEESSLQQQQKANSERRKEQIHCPDIQPSDVKNSTSLQEEELANLEVDLFDRIEIQVVMNVTENASCLWEHDNITRHCTVDKARKTYSFLISQANESHAGMHTLSFQYTNVSYSMRFAVRVRTPPTAPLLRVLHREKLGFPCKILCSAESYPEPTIEWILCTESRGSCLKWDGQNKSPLEVADIHGVRKKVNWVYGLDLFQYNDIRCCAENSAGKECSQLHSFELTSWTNPEVADTSVILKTGEAFLLRFKVPKADGPVELSWTSANDTKQKLVPFESESIHIKKVLFEIIYVFLDAVKKEDTGTYSCTSKTRTQSVQLSVVEQGFITLTHEDAIRHIVEGQTVCFTMELFAYPPVRCRWSSAQEPHPCVAKGNSSYTRTYEFCNHHQTPGKYNFYADNKDSRMNRSMLLYKKEKPHVNLKPEFDGEVQCTGEGYPAPEITWWKCGFSDNCSAESSWKKLTEKPRVQVSEGSKFGHKVELHILNMIQVNDEFHIRCCANNTEGWNCDQNPLRLAVSVPKPHVSDQSLYYAALGFCVPALVFIVCLTYYNHKKKPKYESQLKMIQLLGSSDNDYIYIDFSEVEYDQKWEFPRENLEIGKELGSGAFGKVVEATAYGISKPGASVQVAVKMLKEKFQPSEKEALMSELKMMTHIGAHENIVNLLGACTVAGPVYLIFQYCPYGDLLNYLRINREQFHKTLTDVFTQNHFSLYHNFQPDHTVRYGSDSQNGSYIPMHRIRDTAATEESDILLSAGDPALCACHEECDSNYQNTRKNRDEELHVLTFEDLLSFSYQVAKGMEFLTKRNCIHRDLAARNVLVTHEKVVKIGDFGLARDIMNDSNYIVKGNARLPVKWMSPESLFEGVYTVQSDVWSYGILLWEIFSLGVNPYPGIQVDQSFYKLIQNGFKMEQPYYSTESIYQVMQSCWTLDARKRPAFSQIVSFMESQLFDAEVALYQTPPRKDKLSSSCDYKNVTAICSTEEEAMSDTALQTKGTGETVTELGESE
SIO_010081: flt3
subclass of: SO_0000673
so part of: flt3
location: complement(join(1335796..1335954,1337018..1337123,1337855..1337954,1338281..1338392,1338866..1338988,1339471..1339601,1339693..1339814,1339913..1340066,1340943..1341053,1342882..1342986,1343750..1343882,1344269..1344381,1345312..1345505,1346622..1346730,1346834..1346949,1347416..1347572,1348743..1348890,1348996..1349144,1350296..1350465,1351197..1351329,1354267..1354382,1354789..1355012,1355128..1355252,1363404..1363437))
location: region:1335796-1363437:-1
so has part: feature:1363404-1363437:-1:exon
so has part: feature:1355128-1355252:-1:exon
so has part: feature:1354789-1355012:-1:exon
so has part: feature:1354267-1354382:-1:exon
so has part: feature:1351197-1351329:-1:exon
so has part: feature:1350296-1350465:-1:exon
so has part: feature:1348996-1349144:-1:exon
so has part: feature:1348743-1348890:-1:exon
so has part: feature:1347416-1347572:-1:exon
so has part: feature:1346834-1346949:-1:exon
so has part: feature:1346622-1346730:-1:exon
so has part: feature:1345312-1345505:-1:exon
so has part: feature:1344269-1344381:-1:exon
so has part: feature:1343750-1343882:-1:exon
so has part: feature:1342882-1342986:-1:exon
so has part: feature:1340943-1341053:-1:exon
so has part: feature:1339913-1340066:-1:exon
so has part: feature:1339693-1339814:-1:exon
so has part: feature:1339471-1339601:-1:exon
so has part: feature:1338866-1338988:-1:exon
so has part: feature:1338281-1338392:-1:exon
so has part: feature:1337855-1337954:-1:exon
so has part: feature:1337018-1337123:-1:exon
so has part: feature:1335796-1335954:-1:exon

XP_041088836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1363404-1363437:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355128-1355252:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1354789-1355012:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1354267-1354382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1351197-1351329:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350296-1350465:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1348996-1349144:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1348743-1348890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1347416-1347572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1346834-1346949:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1346622-1346730:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1345312-1345505:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1344269-1344381:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1343750-1343882:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1342882-1342986:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1340943-1341053:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1339913-1340066:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1339693-1339814:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1339471-1339601:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1338866-1338988:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1338281-1338392:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1337855-1337954:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1337018-1337123:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1335796-1335954:-1:exon

pan3
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: pan3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1365691..1388916
location: region:1365691-1388916:1
so has part: feature:1365691-1388916:1:exon
subclass of: SO_0000010

121302746
type: Gene
SIO_000068: ncbigene

position:1365691:1
position: 1365691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1388916:1
position: 1388916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1365691-1388916:1:exon

pan3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: pan3
product: poly(A) specific ribonuclease subunit PAN3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_041232904.1
SIO_010081: pan3
subclass of: SO_0000673
so part of: pan3
location: join(1365691..1366383,1369919..1370040,1370633..1370699,1370905..1370975,1373498..1373648,1375302..1375534,1375867..1375971,1376270..1376327,1377461..1377622,1378116..1378232,1378544..1378645,1380659..1380827,1381615..1381702,1382129..1382268,1383081..1383210,1384133..1384197,1384568..1384706,1385357..1388916)
location: region:1365691-1388916:1
so has part: feature:1365691-1366383:1:exon
so has part: feature:1369919-1370040:1:exon
so has part: feature:1370633-1370699:1:exon
so has part: feature:1370905-1370975:1:exon
so has part: feature:1373498-1373648:1:exon
so has part: feature:1375302-1375534:1:exon
so has part: feature:1375867-1375971:1:exon
so has part: feature:1376270-1376327:1:exon
so has part: feature:1377461-1377622:1:exon
so has part: feature:1378116-1378232:1:exon
so has part: feature:1378544-1378645:1:exon
so has part: feature:1380659-1380827:1:exon
so has part: feature:1381615-1381702:1:exon
so has part: feature:1382129-1382268:1:exon
so has part: feature:1383081-1383210:1:exon
so has part: feature:1384133-1384197:1:exon
so has part: feature:1384568-1384706:1:exon
so has part: feature:1385357-1388916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1365691-1366383:1:exon

position:1366383:1
position: 1366383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1369919-1370040:1:exon

position:1369919:1
position: 1369919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1370040:1
position: 1370040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1370633-1370699:1:exon

position:1370633:1
position: 1370633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1370699:1
position: 1370699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1370905-1370975:1:exon

position:1370905:1
position: 1370905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1370975:1
position: 1370975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1373498-1373648:1:exon

position:1373498:1
position: 1373498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373648:1
position: 1373648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1375302-1375534:1:exon

position:1375302:1
position: 1375302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1375534:1
position: 1375534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1375867-1375971:1:exon

position:1375867:1
position: 1375867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1375971:1
position: 1375971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1376270-1376327:1:exon

position:1376270:1
position: 1376270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376327:1
position: 1376327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1377461-1377622:1:exon

position:1377461:1
position: 1377461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1377622:1
position: 1377622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1378116-1378232:1:exon

position:1378116:1
position: 1378116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378232:1
position: 1378232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1378544-1378645:1:exon

position:1378544:1
position: 1378544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378645:1
position: 1378645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1380659-1380827:1:exon

position:1380659:1
position: 1380659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1380827:1
position: 1380827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1381615-1381702:1:exon

position:1381615:1
position: 1381615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1381702:1
position: 1381702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1382129-1382268:1:exon

position:1382129:1
position: 1382129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382268:1
position: 1382268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1383081-1383210:1:exon

position:1383081:1
position: 1383081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383210:1
position: 1383210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1384133-1384197:1:exon

position:1384133:1
position: 1384133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384197:1
position: 1384197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1384568-1384706:1:exon

position:1384568:1
position: 1384568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384706:1
position: 1384706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1385357-1388916:1:exon

position:1385357:1
position: 1385357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pan3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: pan3
product: poly(A) specific ribonuclease subunit PAN3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_041232905.1
SIO_010081: pan3
subclass of: SO_0000673
so part of: pan3
location: join(1365691..1366383,1369919..1370040,1370633..1370699,1370905..1370975,1373498..1373648,1375302..1375534,1375867..1375971,1376270..1376327,1377461..1377622,1378116..1378232,1378544..1378645,1380662..1380827,1381615..1381702,1382129..1382268,1383081..1383210,1384133..1384197,1384568..1384706,1385357..1388916)
location: region:1365691-1388916:1
so has part: feature:1365691-1366383:1:exon
so has part: feature:1369919-1370040:1:exon
so has part: feature:1370633-1370699:1:exon
so has part: feature:1370905-1370975:1:exon
so has part: feature:1373498-1373648:1:exon
so has part: feature:1375302-1375534:1:exon
so has part: feature:1375867-1375971:1:exon
so has part: feature:1376270-1376327:1:exon
so has part: feature:1377461-1377622:1:exon
so has part: feature:1378116-1378232:1:exon
so has part: feature:1378544-1378645:1:exon
so has part: feature:1380662-1380827:1:exon
so has part: feature:1381615-1381702:1:exon
so has part: feature:1382129-1382268:1:exon
so has part: feature:1383081-1383210:1:exon
so has part: feature:1384133-1384197:1:exon
so has part: feature:1384568-1384706:1:exon
so has part: feature:1385357-1388916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1365691-1366383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1369919-1370040:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1370633-1370699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1370905-1370975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1373498-1373648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1375302-1375534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1375867-1375971:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1376270-1376327:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1377461-1377622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1378116-1378232:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1378544-1378645:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380662-1380827:1:exon

position:1380662:1
position: 1380662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1381615-1381702:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1382129-1382268:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1383081-1383210:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1384133-1384197:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1384568-1384706:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1385357-1388916:1:exon

pan3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: pan3
product: poly(A) specific ribonuclease subunit PAN3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041232906.1
SIO_010081: pan3
subclass of: SO_0000673
so part of: pan3
location: join(1365692..1366383,1369919..1370040,1370633..1370699,1370905..1370975,1373498..1373648,1375302..1375534,1375867..1375971,1376270..1376327,1377461..1377622,1378116..1378232,1378544..1378645,1380659..1380827,1381615..1381702,1382129..1382268,1383081..1383210,1383979..1384126)
location: region:1365692-1384126:1
so has part: feature:1365692-1366383:1:exon
so has part: feature:1369919-1370040:1:exon
so has part: feature:1370633-1370699:1:exon
so has part: feature:1370905-1370975:1:exon
so has part: feature:1373498-1373648:1:exon
so has part: feature:1375302-1375534:1:exon
so has part: feature:1375867-1375971:1:exon
so has part: feature:1376270-1376327:1:exon
so has part: feature:1377461-1377622:1:exon
so has part: feature:1378116-1378232:1:exon
so has part: feature:1378544-1378645:1:exon
so has part: feature:1380659-1380827:1:exon
so has part: feature:1381615-1381702:1:exon
so has part: feature:1382129-1382268:1:exon
so has part: feature:1383081-1383210:1:exon
so has part: feature:1383979-1384126:1:exon

position:1365692:1
position: 1365692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384126:1
position: 1384126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1365692-1366383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1369919-1370040:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1370633-1370699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1370905-1370975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1373498-1373648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1375302-1375534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1375867-1375971:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1376270-1376327:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1377461-1377622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1378116-1378232:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1378544-1378645:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380659-1380827:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381615-1381702:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1382129-1382268:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1383081-1383210:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1383979-1384126:1:exon

position:1383979:1
position: 1383979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pan3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: pan3
product: poly(A) specific ribonuclease subunit PAN3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041232907.1
SIO_010081: pan3
subclass of: SO_0000673
so part of: pan3
location: join(1365693..1366383,1369919..1370040,1370633..1370699,1370905..1370975,1373498..1373648,1375302..1375534,1375867..1375971,1376270..1376327,1377461..1377622,1378116..1378232,1378544..1378645,1380659..1380827,1381615..1381702,1382129..1382268,1383081..1383210,1384568..1384705)
location: region:1365693-1384705:1
so has part: feature:1365693-1366383:1:exon
so has part: feature:1369919-1370040:1:exon
so has part: feature:1370633-1370699:1:exon
so has part: feature:1370905-1370975:1:exon
so has part: feature:1373498-1373648:1:exon
so has part: feature:1375302-1375534:1:exon
so has part: feature:1375867-1375971:1:exon
so has part: feature:1376270-1376327:1:exon
so has part: feature:1377461-1377622:1:exon
so has part: feature:1378116-1378232:1:exon
so has part: feature:1378544-1378645:1:exon
so has part: feature:1380659-1380827:1:exon
so has part: feature:1381615-1381702:1:exon
so has part: feature:1382129-1382268:1:exon
so has part: feature:1383081-1383210:1:exon
so has part: feature:1384568-1384705:1:exon

position:1365693:1
position: 1365693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384705:1
position: 1384705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1365693-1366383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1369919-1370040:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1370633-1370699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1370905-1370975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1373498-1373648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1375302-1375534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1375867-1375971:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1376270-1376327:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1377461-1377622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1378116-1378232:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1378544-1378645:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380659-1380827:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381615-1381702:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1382129-1382268:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1383081-1383210:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1384568-1384705:1:exon

pan3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: pan3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
translation: MNSGLPASASPLGGICIPGVKLKYCRYYAKDKTCFYGDECQFLHEEPSMAGLAHHASGSPVPLSMAGPAVGAAPGYPHAGAGTAGSGGGGGTKKIDPLGAAGVGLEGQLLAIPGMDGGALAEGSLTNSYFSSSFIGVNGFGSPAEPKYSMMQRMTSSSSSPSLLNDSVKSYAPHDPVNSPAASLFNDFAALNLSQRRKAPNPAASEFIPKGVSTPRMSNVSQSNMPAFSTALFSHPSMGSMSTAALAPGMSLSAGSSPLHSPKTTPHSSPAPRRRSHTPNPAANYMAPTSASNPSSDPASQIIQKETVGGTTYFYTDTTPAPLAGMVFPQYHVYPPTAPHVAYMQPKANAPSFFMSDELRQELINRHLITMAQIDQSENPGVPTEVDNYHSLFPLESLPPPNRLQKTSNFSYVTSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQHSNFVTLREVFTTKAFGEHSLVFAYDFHAGAETMFSRHFNDPSADSYFTKRKWAGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRSIHTAGLACRVMDPTKILITGKTRLRVNCVGIFDVLTFDNSQTNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLTEQNRLRSVNDIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIVSCLNKLDSGVPEKISLVSRDEKSILVVTYADLKRCFESTFQELQAAANGQL
SIO_010081: pan3
subclass of: SO_0000673
so part of: pan3
location: join(1366050..1366383,1369919..1370040,1370633..1370699,1370905..1370975,1373498..1373648,1375302..1375534,1375867..1375971,1376270..1376327,1377461..1377622,1378116..1378232,1378544..1378645,1380659..1380827,1381615..1381702,1382129..1382268,1383081..1383210,1384133..1384197,1384568..1384706,1385357..1385497)
location: region:1366050-1385497:1
so has part: feature:1366050-1366383:1:exon
so has part: feature:1369919-1370040:1:exon
so has part: feature:1370633-1370699:1:exon
so has part: feature:1370905-1370975:1:exon
so has part: feature:1373498-1373648:1:exon
so has part: feature:1375302-1375534:1:exon
so has part: feature:1375867-1375971:1:exon
so has part: feature:1376270-1376327:1:exon
so has part: feature:1377461-1377622:1:exon
so has part: feature:1378116-1378232:1:exon
so has part: feature:1378544-1378645:1:exon
so has part: feature:1380659-1380827:1:exon
so has part: feature:1381615-1381702:1:exon
so has part: feature:1382129-1382268:1:exon
so has part: feature:1383081-1383210:1:exon
so has part: feature:1384133-1384197:1:exon
so has part: feature:1384568-1384706:1:exon
so has part: feature:1385357-1385497:1:exon

XP_041088838.1
type: Protein
SIO_000068: ncbiprotein

position:1366050:1
position: 1366050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385497:1
position: 1385497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1366050-1366383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1369919-1370040:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1370633-1370699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1370905-1370975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1373498-1373648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1375302-1375534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1375867-1375971:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1376270-1376327:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1377461-1377622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1378116-1378232:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1378544-1378645:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380659-1380827:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381615-1381702:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1382129-1382268:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1383081-1383210:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1384133-1384197:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1384568-1384706:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1385357-1385497:1:exon

pan3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: pan3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PAN2-PAN3 deadenylation complex subunit PAN3 isoform X2
translation: MNSGLPASASPLGGICIPGVKLKYCRYYAKDKTCFYGDECQFLHEEPSMAGLAHHASGSPVPLSMAGPAVGAAPGYPHAGAGTAGSGGGGGTKKIDPLGAAGVGLEGQLLAIPGMDGGALAEGSLTNSYFSSSFIGVNGFGSPAEPKYSMMQRMTSSSSSPSLLNDSVKSYAPHDPVNSPAASLFNDFAALNLSQRRKAPNPAASEFIPKGVSTPRMSNVSQSNMPAFSTALFSHPSMGSMSTAALAPGMSLSAGSSPLHSPKTTPHSSPAPRRRSHTPNPAANYMAPTSASNPSSDPASQIIQKETVGGTTYFYTDTTPAPLAGMVFPQYHVYPPTAPHVAYMQPKANAPSFFMSDELRQELINRHLITMAQIDQSENPGVPTEVDNYHSLFPLESLPPPNRLQKTSNFSYVTSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQHSNFVTLREVFTTKAFGEHSLVFAYDFHAGAETMFSRHFNDPSADSYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRSIHTAGLACRVMDPTKILITGKTRLRVNCVGIFDVLTFDNSQTNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLTEQNRLRSVNDIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIVSCLNKLDSGVPEKISLVSRDEKSILVVTYADLKRCFESTFQELQAAANGQL
SIO_010081: pan3
subclass of: SO_0000673
so part of: pan3
location: join(1366050..1366383,1369919..1370040,1370633..1370699,1370905..1370975,1373498..1373648,1375302..1375534,1375867..1375971,1376270..1376327,1377461..1377622,1378116..1378232,1378544..1378645,1380662..1380827,1381615..1381702,1382129..1382268,1383081..1383210,1384133..1384197,1384568..1384706,1385357..1385497)
location: region:1366050-1385497:1
so has part: feature:1366050-1366383:1:exon
so has part: feature:1369919-1370040:1:exon
so has part: feature:1370633-1370699:1:exon
so has part: feature:1370905-1370975:1:exon
so has part: feature:1373498-1373648:1:exon
so has part: feature:1375302-1375534:1:exon
so has part: feature:1375867-1375971:1:exon
so has part: feature:1376270-1376327:1:exon
so has part: feature:1377461-1377622:1:exon
so has part: feature:1378116-1378232:1:exon
so has part: feature:1378544-1378645:1:exon
so has part: feature:1380662-1380827:1:exon
so has part: feature:1381615-1381702:1:exon
so has part: feature:1382129-1382268:1:exon
so has part: feature:1383081-1383210:1:exon
so has part: feature:1384133-1384197:1:exon
so has part: feature:1384568-1384706:1:exon
so has part: feature:1385357-1385497:1:exon

XP_041088839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1366050-1366383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1369919-1370040:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1370633-1370699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1370905-1370975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1373498-1373648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1375302-1375534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1375867-1375971:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1376270-1376327:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1377461-1377622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1378116-1378232:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1378544-1378645:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380662-1380827:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381615-1381702:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1382129-1382268:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1383081-1383210:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1384133-1384197:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1384568-1384706:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1385357-1385497:1:exon

pan3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: pan3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PAN2-PAN3 deadenylation complex subunit PAN3 isoform X4
translation: MNSGLPASASPLGGICIPGVKLKYCRYYAKDKTCFYGDECQFLHEEPSMAGLAHHASGSPVPLSMAGPAVGAAPGYPHAGAGTAGSGGGGGTKKIDPLGAAGVGLEGQLLAIPGMDGGALAEGSLTNSYFSSSFIGVNGFGSPAEPKYSMMQRMTSSSSSPSLLNDSVKSYAPHDPVNSPAASLFNDFAALNLSQRRKAPNPAASEFIPKGVSTPRMSNVSQSNMPAFSTALFSHPSMGSMSTAALAPGMSLSAGSSPLHSPKTTPHSSPAPRRRSHTPNPAANYMAPTSASNPSSDPASQIIQKETVGGTTYFYTDTTPAPLAGMVFPQYHVYPPTAPHVAYMQPKANAPSFFMSDELRQELINRHLITMAQIDQSENPGVPTEVDNYHSLFPLESLPPPNRLQKTSNFSYVTSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQHSNFVTLREVFTTKAFGEHSLVFAYDFHAGAETMFSRHFNDPSADSYFTKRKWAGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRSIHTAGLACRVMDPTKILITGKTRLRVNCVGIFDVLTFDNSQTNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLTEQNRLRSVNDIMPMIGARFYTQLDASQMRNDVIEEDLAKVPKRSNVVGDGRPIPAQAL
SIO_010081: pan3
subclass of: SO_0000673
so part of: pan3
location: join(1366050..1366383,1369919..1370040,1370633..1370699,1370905..1370975,1373498..1373648,1375302..1375534,1375867..1375971,1376270..1376327,1377461..1377622,1378116..1378232,1378544..1378645,1380659..1380827,1381615..1381702,1382129..1382268,1383081..1383210,1384568..1384627)
location: region:1366050-1384627:1
so has part: feature:1366050-1366383:1:exon
so has part: feature:1369919-1370040:1:exon
so has part: feature:1370633-1370699:1:exon
so has part: feature:1370905-1370975:1:exon
so has part: feature:1373498-1373648:1:exon
so has part: feature:1375302-1375534:1:exon
so has part: feature:1375867-1375971:1:exon
so has part: feature:1376270-1376327:1:exon
so has part: feature:1377461-1377622:1:exon
so has part: feature:1378116-1378232:1:exon
so has part: feature:1378544-1378645:1:exon
so has part: feature:1380659-1380827:1:exon
so has part: feature:1381615-1381702:1:exon
so has part: feature:1382129-1382268:1:exon
so has part: feature:1383081-1383210:1:exon
so has part: feature:1384568-1384627:1:exon

XP_041088841.1
type: Protein
SIO_000068: ncbiprotein

position:1384627:1
position: 1384627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1366050-1366383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1369919-1370040:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1370633-1370699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1370905-1370975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1373498-1373648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1375302-1375534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1375867-1375971:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1376270-1376327:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1377461-1377622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1378116-1378232:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1378544-1378645:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380659-1380827:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381615-1381702:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1382129-1382268:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1383081-1383210:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1384568-1384627:1:exon

pan3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: pan3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PAN2-PAN3 deadenylation complex subunit PAN3 isoform X3
translation: MNSGLPASASPLGGICIPGVKLKYCRYYAKDKTCFYGDECQFLHEEPSMAGLAHHASGSPVPLSMAGPAVGAAPGYPHAGAGTAGSGGGGGTKKIDPLGAAGVGLEGQLLAIPGMDGGALAEGSLTNSYFSSSFIGVNGFGSPAEPKYSMMQRMTSSSSSPSLLNDSVKSYAPHDPVNSPAASLFNDFAALNLSQRRKAPNPAASEFIPKGVSTPRMSNVSQSNMPAFSTALFSHPSMGSMSTAALAPGMSLSAGSSPLHSPKTTPHSSPAPRRRSHTPNPAANYMAPTSASNPSSDPASQIIQKETVGGTTYFYTDTTPAPLAGMVFPQYHVYPPTAPHVAYMQPKANAPSFFMSDELRQELINRHLITMAQIDQSENPGVPTEVDNYHSLFPLESLPPPNRLQKTSNFSYVTSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQHSNFVTLREVFTTKAFGEHSLVFAYDFHAGAETMFSRHFNDPSADSYFTKRKWAGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRSIHTAGLACRVMDPTKILITGKTRLRVNCVGIFDVLTFDNSQTNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLTEQNRLRSVNDIMPMIGARFYTQLDASQMRNDVIEEDLAKLLLQWEFHTHTKRFAYVFCFVFKLLF
SIO_010081: pan3
subclass of: SO_0000673
so part of: pan3
location: join(1366050..1366383,1369919..1370040,1370633..1370699,1370905..1370975,1373498..1373648,1375302..1375534,1375867..1375971,1376270..1376327,1377461..1377622,1378116..1378232,1378544..1378645,1380659..1380827,1381615..1381702,1382129..1382268,1383081..1383210,1383979..1384059)
location: region:1366050-1384059:1
so has part: feature:1366050-1366383:1:exon
so has part: feature:1369919-1370040:1:exon
so has part: feature:1370633-1370699:1:exon
so has part: feature:1370905-1370975:1:exon
so has part: feature:1373498-1373648:1:exon
so has part: feature:1375302-1375534:1:exon
so has part: feature:1375867-1375971:1:exon
so has part: feature:1376270-1376327:1:exon
so has part: feature:1377461-1377622:1:exon
so has part: feature:1378116-1378232:1:exon
so has part: feature:1378544-1378645:1:exon
so has part: feature:1380659-1380827:1:exon
so has part: feature:1381615-1381702:1:exon
so has part: feature:1382129-1382268:1:exon
so has part: feature:1383081-1383210:1:exon
so has part: feature:1383979-1384059:1:exon

XP_041088840.1
type: Protein
SIO_000068: ncbiprotein

position:1384059:1
position: 1384059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1366050-1366383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1369919-1370040:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1370633-1370699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1370905-1370975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1373498-1373648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1375302-1375534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1375867-1375971:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1376270-1376327:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1377461-1377622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1378116-1378232:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1378544-1378645:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380659-1380827:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381615-1381702:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1382129-1382268:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1383081-1383210:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1383979-1384059:1:exon

LOC121302750
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1389262..1390914
location: region:1389262-1390914:1
so has part: feature:1389262-1390914:1:exon
subclass of: SO_0000011

121302750
type: Gene
SIO_000068: ncbigene

position:1389262:1
position: 1389262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390914:1
position: 1390914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389262-1390914:1:exon

LOC121302750
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7913
nc RNA class: lncRNA
gene: LOC121302750
product: uncharacterized LOC121302750
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005947723.1
SIO_010081: LOC121302750
subclass of: SO_0000673
so part of: LOC121302750
location: join(1389262..1389892,1390344..1390790,1390887..1390914)
location: region:1389262-1390914:1
so has part: feature:1389262-1389892:1:exon
so has part: feature:1390344-1390790:1:exon
so has part: feature:1390887-1390914:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1389262-1389892:1:exon

position:1389892:1
position: 1389892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1390344-1390790:1:exon

position:1390344:1
position: 1390344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390790:1
position: 1390790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1390887-1390914:1:exon

position:1390887:1
position: 1390887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121302748
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302748
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1391045..1395935)
location: region:1391045-1395935:-1
so has part: feature:1391045-1395935:-1:exon
subclass of: SO_0000010

121302748
type: Gene
SIO_000068: ncbigene

position:1391045:-1
position: 1391045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1395935:-1
position: 1395935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1391045-1395935:-1:exon

LOC121302748
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302748
product: vascular endothelial growth factor receptor 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_041232909.1
SIO_010081: LOC121302748
subclass of: SO_0000673
so part of: LOC121302748
location: complement(join(1391045..1393273,1393960..1394063,1394434..1394509,1394879..1395027,1395664..1395935))
location: region:1391045-1395935:-1
so has part: feature:1395664-1395935:-1:exon
so has part: feature:1394879-1395027:-1:exon
so has part: feature:1394434-1394509:-1:exon
so has part: feature:1393960-1394063:-1:exon
so has part: feature:1391045-1393273:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1395664-1395935:-1:exon

position:1395664:-1
position: 1395664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1394879-1395027:-1:exon

position:1394879:-1
position: 1394879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1395027:-1
position: 1395027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1394434-1394509:-1:exon

position:1394434:-1
position: 1394434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394509:-1
position: 1394509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1393960-1394063:-1:exon

position:1393960:-1
position: 1393960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394063:-1
position: 1394063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1391045-1393273:-1:exon

position:1393273:-1
position: 1393273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121302748
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302748
product: vascular endothelial growth factor receptor 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041232911.1
SIO_010081: LOC121302748
subclass of: SO_0000673
so part of: LOC121302748
location: complement(join(1391045..1393273,1393960..1394060,1394434..1394509,1394879..1395027,1395664..1395927))
location: region:1391045-1395927:-1
so has part: feature:1395664-1395927:-1:exon
so has part: feature:1394879-1395027:-1:exon
so has part: feature:1394434-1394509:-1:exon
so has part: feature:1393960-1394060:-1:exon
so has part: feature:1391045-1393273:-1:exon

position:1395927:-1
position: 1395927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1395664-1395927:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1394879-1395027:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1394434-1394509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1393960-1394060:-1:exon

position:1394060:-1
position: 1394060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1391045-1393273:-1:exon

LOC121302748
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302748
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial growth factor receptor 1-like isoform X2
translation: MLSCWESDPKARPTFSELVERLGDLLQASVQQDGKDYIPLNPLLTSSSPAACSTSSSSHRSVGEEAQDSDSTLSYECSGGFGYMNTRSAQEFKTFEELSLRDRAPPDDYQTDSGMVLASEEFKCLMWSRDKPKHASSHSFGLNAASKRKESVQSNAYISSCALREQDCGAASCSSSMQEPCWSPPPDYNAAVYFYPSL
SIO_010081: LOC121302748
subclass of: SO_0000673
so part of: LOC121302748
location: complement(join(1393099..1393273,1393960..1394060,1394434..1394509,1394879..1395027,1395664..1395759))
location: region:1393099-1395759:-1
so has part: feature:1395664-1395759:-1:exon
so has part: feature:1394879-1395027:-1:exon
so has part: feature:1394434-1394509:-1:exon
so has part: feature:1393960-1394060:-1:exon
so has part: feature:1393099-1393273:-1:exon

XP_041088845.1
type: Protein
SIO_000068: ncbiprotein

position:1393099:-1
position: 1393099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1395759:-1
position: 1395759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1395664-1395759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1394879-1395027:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1394434-1394509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1393960-1394060:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393099-1393273:-1:exon

LOC121302748
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302748
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial growth factor receptor 1-like isoform X1
translation: MLSCWESDPKARPTFSELVERLGDLLQASVQQDGKDYIPLNPLLTSSSPAACSTSSSSHRSVGEEAQDSDSTLSYECSGGFGYMNTRSAQEFKTFEELSLRDRAPPDQDYQTDSGMVLASEEFKCLMWSRDKPKHASSHSFGLNAASKRKESVQSNAYISSCALREQDCGAASCSSSMQEPCWSPPPDYNAAVYFYPSL
SIO_010081: LOC121302748
subclass of: SO_0000673
so part of: LOC121302748
location: complement(join(1393099..1393273,1393960..1394063,1394434..1394509,1394879..1395027,1395664..1395759))
location: region:1393099-1395759:-1
so has part: feature:1395664-1395759:-1:exon
so has part: feature:1394879-1395027:-1:exon
so has part: feature:1394434-1394509:-1:exon
so has part: feature:1393960-1394063:-1:exon
so has part: feature:1393099-1393273:-1:exon

XP_041088843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1395664-1395759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1394879-1395027:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1394434-1394509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1393960-1394063:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393099-1393273:-1:exon

LOC121302747
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302747
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1397789..1426087)
location: region:1397789-1426087:-1
so has part: feature:1397789-1426087:-1:exon
subclass of: SO_0000010

121302747
type: Gene
SIO_000068: ncbigene

position:1397789:-1
position: 1397789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1426087:-1
position: 1426087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1397789-1426087:-1:exon

LOC121302747
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302747
product: vascular endothelial growth factor receptor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_041232908.1
SIO_010081: LOC121302747
subclass of: SO_0000673
so part of: LOC121302747
location: complement(join(1397789..1400045,1402983..1403152,1404179..1404296,1404820..1404988,1405629..1405765,1406030..1406192,1410507..1410631,1413950..1414164,1414441..1414537,1425677..1426087))
location: region:1397789-1426087:-1
so has part: feature:1425677-1426087:-1:exon
so has part: feature:1414441-1414537:-1:exon
so has part: feature:1413950-1414164:-1:exon
so has part: feature:1410507-1410631:-1:exon
so has part: feature:1406030-1406192:-1:exon
so has part: feature:1405629-1405765:-1:exon
so has part: feature:1404820-1404988:-1:exon
so has part: feature:1404179-1404296:-1:exon
so has part: feature:1402983-1403152:-1:exon
so has part: feature:1397789-1400045:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1425677-1426087:-1:exon

position:1425677:-1
position: 1425677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1414441-1414537:-1:exon

position:1414441:-1
position: 1414441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414537:-1
position: 1414537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1413950-1414164:-1:exon

position:1413950:-1
position: 1413950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414164:-1
position: 1414164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1410507-1410631:-1:exon

position:1410507:-1
position: 1410507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410631:-1
position: 1410631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1406030-1406192:-1:exon

position:1406030:-1
position: 1406030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1406192:-1
position: 1406192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1405629-1405765:-1:exon

position:1405629:-1
position: 1405629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1405765:-1
position: 1405765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1404820-1404988:-1:exon

position:1404820:-1
position: 1404820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404988:-1
position: 1404988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1404179-1404296:-1:exon

position:1404179:-1
position: 1404179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404296:-1
position: 1404296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1402983-1403152:-1:exon

position:1402983:-1
position: 1402983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1403152:-1
position: 1403152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1397789-1400045:-1:exon

position:1400045:-1
position: 1400045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121302747
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7913
gene: LOC121302747
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial growth factor receptor 1-like
translation: MICYILIICCGLAGNVLSKGSRSSSRLNTPVLSVTSKQIVIQASQTLQLQCKGKAQLAWTSPDSVHPDQGRLSIKEYRCGFQDQLHCSSLTLRGASAQDTGAYACKYSTKKRKRQAAVYVYIRDALKPFLELHSSIPEVVYLTEGRKLIIPCRVTAPDIPVTLKKFPEERLIPDGKKIIWNSKHGFIIPDPTYQFIGLLSCEATSNGVLYSTKYLTHRQVNTIFDVYLNATNPLKMLRGETLAINCTVTAEWNARVQITWDYPGKGNSSALITNRIDQSSSNIFHSILVIKQLKDTDRGVYSCNVQSGPSTRDTNTTLVIYDKPFISVKYRHRPTVEVTAGQDSFKLSLKVKAFPSPEVVWLKDGMIAAEKCARYKIDGYTLIIRDVSEEDAGSYTLKLGIQQHNLYRNLTVSLVVNVKPQIGEKAVSYQDPGTYLVGSKQALICTSHGFPPPRIQWLWHPCARNNTKGL
SIO_010081: LOC121302747
subclass of: SO_0000673
so part of: LOC121302747
location: complement(join(1399885..1400045,1402983..1403152,1404179..1404296,1404820..1404988,1405629..1405765,1406030..1406192,1410507..1410631,1413950..1414164,1414441..1414537,1425677..1425734))
location: region:1399885-1425734:-1
so has part: feature:1425677-1425734:-1:exon
so has part: feature:1414441-1414537:-1:exon
so has part: feature:1413950-1414164:-1:exon
so has part: feature:1410507-1410631:-1:exon
so has part: feature:1406030-1406192:-1:exon
so has part: feature:1405629-1405765:-1:exon
so has part: feature:1404820-1404988:-1:exon
so has part: feature:1404179-1404296:-1:exon
so has part: feature:1402983-1403152:-1:exon
so has part: feature:1399885-1400045:-1:exon

XP_041088842.1
type: Protein
SIO_000068: ncbiprotein

position:1399885:-1
position: 1399885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1425734:-1
position: 1425734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1425677-1425734:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1414441-1414537:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1413950-1414164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1410507-1410631:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1406030-1406192:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1405629-1405765:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1404820-1404988:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1404179-1404296:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1402983-1403152:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1399885-1400045:-1:exon

LOC121302857
type: Gene
subclass of: SO_0000704
RO_0002162: 7913
gene: LOC121302857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1430943..1446669)
location: region:1430943-1446669:-1
so has part: feature:1430943-1446669:-1:exon
subclass of: SO_0000010

121302857
type: Gene
SIO_000068: ncbigene

position:1430943:-1
position: 1430943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1446669:-1
position: 1446669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1430943-1446669:-1:exon

LOC121302857
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7913
gene: LOC121302857
product: suppressor of tumorigenicity 14 protein-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041233146.1
SIO_010081: LOC121302857
subclass of: SO_0000673
so part of: LOC121302857
location: complement(join(1430943..1432299,1433204..1433340,1438078..1438194,1438789..1438905,1439872..1439976,1440229..1440362,1441175..1441278,1441888..1441985,1442327..1442466,1442641..1442827,1443000..1443038,1443422..1443618,1444690..1444757,1444867..1444994,1445393..1445648,1446157..1446669))
location: region:1430943-1446669:-1
so has part: feature:1446157-1446669:-1:exon
so has part: feature:1445393-1445648:-1:exon
so has part: feature:1444867-1444994:-1:exon
so has part: feature:1444690-1444757:-1:exon
so has part: feature:1443422-1443618:-1:exon
so has part: feature:1443000-1443038:-1:exon
so has part: feature:1442641-1442827:-1:exon
so has part: feature:1442327-1442466:-1:exon
so has part: feature:1441888-1441985:-1:exon
so has part: feature:1441175-1441278:-1:exon
so has part: feature:1440229-1440362:-1:exon
so has part: feature:1439872-1439976:-1:exon
so has part: feature:1438789-1438905:-1:exon
so has part: feature:1438078-1438194:-1:exon
so has part: feature:1433204-1433340:-1:exon
so has part: feature:1430943-1432299:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1446157-1446669:-1:exon

position:1446157:-1
position: 1446157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1445393-1445648:-1:exon

position:1445393:-1
position: 1445393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445648:-1
position: 1445648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1444867-1444994:-1:exon

position:1444867:-1
position: 1444867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1444994:-1
position: 1444994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1444690-1444757:-1:exon

position:1444690:-1
position: 1444690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1444757:-1
position: 1444757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1443422-1443618:-1:exon

position:1443422:-1
position: 1443422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1443618:-1
position: 1443618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1443000-1443038:-1:exon

position:1443000:-1
position: 1443000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1443038:-1
position: 1443038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1442641-1442827:-1:exon

position:1442641:-1
position: 1442641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442827:-1
position: 1442827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1442327-1442466:-1:exon

position:1442327:-1
position: 1442327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442466:-1
position: 1442466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1441888-1441985:-1:exon

position:1441888:-1
position: 1441888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441985:-1
position: 1441985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1441175-1441278:-1:exon

position:1441175:-1
position: 1441175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441278:-1
position: 1441278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1440229-1440362:-1:exon

position:1440229:-1
position: 1440229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1440362:-1
position: 1440362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition