Acipenser ruthenus isolate Gen_M01 chromosome 58, ASM1064508v1, whole genome shotgun sequence.
type: Entry
definition: Acipenser ruthenus isolate Gen_M01 chromosome 58, ASM1064508v1, whole genome shotgun sequence.
sequence version: NC_048380.1
sequence date: 2020-06-05
sequence: sequence
division: CON
label: NC_048380.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA635364
dblink: SAMN12612932
keyword: WGS
keyword: RefSeq
source: Acipenser ruthenus (sterlet)
organism: Acipenser ruthenus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser.
reference: 1
references: 32231327
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021308.1.\nAssembly name: ASM1064508v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of Wuerzburg on\n2020/02/19. The original whole-genome shotgun project has the\naccession VTUV00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of Wuerzburg\nAssembly Method :: SmartDeNovo v. May-2017; 3D-DNA v. 180114\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 42.0x\nSequencing Technology :: Illumina NovaSeq; PacBio; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Acipenser ruthenus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 901641
topology: linear
so has quality: SO_0000987
location: 1..901641
location: region:1-901641:1
RO_0002162: 7906

NC_048380
type: RefSeq
SIO_000068: refseq

PRJNA635364
type: BioProject
SIO_000068: bioproject

SAMN12612932
type: BioSample
SIO_000068: biosample

1
title: The sterlet sturgeon genome sequence and the mechanisms of segmental rediploidization
author: Du, K.
author: Stock, M.
author: Kneitz, S.
author: Klopp, C.
author: Woltering, J.M.
author: Adolfi, M.C.
author: Feron, R.
author: Prokopov, D.
author: Makunin, A.
author: Kichigin, I.
author: Schmidt, C.
author: Fischer, P.
author: Kuhl, H.
author: Wuertz, S.
author: Gessner, J.
author: Kloas, W.
author: Cabau, C.
author: Iampietro, C.
author: Parrinello, H.
author: Tomlinson, C.
author: Journot, L.
author: Postlethwait, J.H.
author: Braasch, I.
author: Trifonov, V.
author: Warren, W.C.
author: Meyer, A.
author: Guiguen, Y.
author: Schartl, M.
journal: Nat Ecol Evol (2020)
pubmed: 32231327

32231327
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901641:1
position: 901641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-901641:1:source
so part of: sequence
organism: Acipenser ruthenus
mol type: genomic DNA
isolate: Gen_M01
isolation source: water
chromosome: 58
tissue type: testis, blood
country: Germany: IGB
lat lon: 52.448940 N 13.648750 E
collection date: 2018

7906
type: Taxonomy
SIO_000068: taxonomy

LOC117414802
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117414802
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 4869..5049
location: region:4869-5049:1
so has part: feature:4869-5049:1:exon

117414802
type: Gene
SIO_000068: ncbigene

position:4869:1
position: 4869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5049:1
position: 5049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4869-5049:1:exon

LOC117414802
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117414802
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117414802
subclass of: SO_0000673
so part of: LOC117414802
location: 4869..5049
location: region:4869-5049:1
so has part: feature:4869-5049:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4869-5049:1:exon

LOC117414693
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117414693
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 15183..15364
location: region:15183-15364:1
so has part: feature:15183-15364:1:exon
subclass of: SO_0000623

117414693
type: Gene
SIO_000068: ncbigene

position:15183:1
position: 15183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15364:1
position: 15364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15183-15364:1:exon

LOC117414693
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117414693
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662227.1
SIO_010081: LOC117414693
subclass of: SO_0000673
so part of: LOC117414693
location: 15183..15364
location: region:15183-15364:1
so has part: feature:15183-15364:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15183-15364:1:exon

LOC117414442
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117414442
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 23865..24055
location: region:23865-24055:1
so has part: feature:23865-24055:1:exon
subclass of: SO_0000623

117414442
type: Gene
SIO_000068: ncbigene

position:23865:1
position: 23865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24055:1
position: 24055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23865-24055:1:exon

LOC117414442
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117414442
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004546237.2
SIO_010081: LOC117414442
subclass of: SO_0000673
so part of: LOC117414442
location: 23865..24055
location: region:23865-24055:1
so has part: feature:23865-24055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23865-24055:1:exon

LOC117968075
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968075
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 29506..29686
location: region:29506-29686:1
so has part: feature:29506-29686:1:exon

117968075
type: Gene
SIO_000068: ncbigene

position:29506:1
position: 29506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29686:1
position: 29686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29506-29686:1:exon

LOC117968075
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968075
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117968075
subclass of: SO_0000673
so part of: LOC117968075
location: 29506..29686
location: region:29506-29686:1
so has part: feature:29506-29686:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29506-29686:1:exon

LOC117414632
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117414632
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 37064..37248
location: region:37064-37248:1
so has part: feature:37064-37248:1:exon
subclass of: SO_0000623

117414632
type: Gene
SIO_000068: ncbigene

position:37064:1
position: 37064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37248:1
position: 37248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37064-37248:1:exon

LOC117414632
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117414632
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004546272.1
SIO_010081: LOC117414632
subclass of: SO_0000673
so part of: LOC117414632
location: 37064..37248
location: region:37064-37248:1
so has part: feature:37064-37248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37064-37248:1:exon

LOC117414672
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117414672
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 42937..43116
location: region:42937-43116:1
so has part: feature:42937-43116:1:exon

117414672
type: Gene
SIO_000068: ncbigene

position:42937:1
position: 42937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43116:1
position: 43116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42937-43116:1:exon

LOC117414672
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117414672
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117414672
subclass of: SO_0000673
so part of: LOC117414672
location: 42937..43116
location: region:42937-43116:1
so has part: feature:42937-43116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42937-43116:1:exon

LOC117414449
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117414449
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(44506..44696)
location: region:44506-44696:-1
so has part: feature:44506-44696:-1:exon
subclass of: SO_0000623

117414449
type: Gene
SIO_000068: ncbigene

position:44506:-1
position: 44506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44696:-1
position: 44696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44506-44696:-1:exon

LOC117414449
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117414449
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004546240.2
SIO_010081: LOC117414449
subclass of: SO_0000673
so part of: LOC117414449
location: complement(44506..44696)
location: region:44506-44696:-1
so has part: feature:44506-44696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44506-44696:-1:exon

LOC117414704
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117414704
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 51738..51908
location: region:51738-51908:1
so has part: feature:51738-51908:1:exon

117414704
type: Gene
SIO_000068: ncbigene

position:51738:1
position: 51738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51908:1
position: 51908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51738-51908:1:exon

LOC117414704
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117414704
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117414704
subclass of: SO_0000673
so part of: LOC117414704
location: 51738..51908
location: region:51738-51908:1
so has part: feature:51738-51908:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51738-51908:1:exon

LOC117414649
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117414649
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 57509..57720
location: region:57509-57720:1
so has part: feature:57509-57720:1:exon

117414649
type: Gene
SIO_000068: ncbigene

position:57509:1
position: 57509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57720:1
position: 57720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57509-57720:1:exon

LOC117414649
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117414649
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117414649
subclass of: SO_0000673
so part of: LOC117414649
location: 57509..57720
location: region:57509-57720:1
so has part: feature:57509-57720:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57509-57720:1:exon

LOC117414819
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117414819
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 58236..58341
location: region:58236-58341:1
so has part: feature:58236-58341:1:exon

117414819
type: Gene
SIO_000068: ncbigene

position:58236:1
position: 58236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58341:1
position: 58341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58236-58341:1:exon

LOC117414819
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117414819
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117414819
subclass of: SO_0000673
so part of: LOC117414819
location: 58236..58341
location: region:58236-58341:1
so has part: feature:58236-58341:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58236-58341:1:exon

LOC117968059
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968059
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(83626..83790)
location: region:83626-83790:-1
so has part: feature:83626-83790:-1:exon

117968059
type: Gene
SIO_000068: ncbigene

position:83626:-1
position: 83626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83790:-1
position: 83790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83626-83790:-1:exon

LOC117968059
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968059
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117968059
subclass of: SO_0000673
so part of: LOC117968059
location: complement(83626..83790)
location: region:83626-83790:-1
so has part: feature:83626-83790:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83626-83790:-1:exon

LOC117968084
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968084
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(104922..105121)
location: region:104922-105121:-1
so has part: feature:104922-105121:-1:exon
subclass of: SO_0000623

117968084
type: Gene
SIO_000068: ncbigene

position:104922:-1
position: 104922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105121:-1
position: 105121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104922-105121:-1:exon

LOC117968084
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968084
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662235.1
SIO_010081: LOC117968084
subclass of: SO_0000673
so part of: LOC117968084
location: complement(104922..105121)
location: region:104922-105121:-1
so has part: feature:104922-105121:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104922-105121:-1:exon

LOC117968064
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968064
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(116096..116210)
location: region:116096-116210:-1
so has part: feature:116096-116210:-1:exon
subclass of: SO_0000623

117968064
type: Gene
SIO_000068: ncbigene

position:116096:-1
position: 116096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116210:-1
position: 116210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116096-116210:-1:exon

LOC117968064
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968064
product: U5 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00020
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662214.1
SIO_010081: LOC117968064
subclass of: SO_0000673
so part of: LOC117968064
location: complement(116096..116210)
location: region:116096-116210:-1
so has part: feature:116096-116210:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:116096-116210:-1:exon

LOC117414624
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117414624
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(116572..116756)
location: region:116572-116756:-1
so has part: feature:116572-116756:-1:exon
subclass of: SO_0000623

117414624
type: Gene
SIO_000068: ncbigene

position:116572:-1
position: 116572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116756:-1
position: 116756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116572-116756:-1:exon

LOC117414624
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117414624
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662240.1
SIO_010081: LOC117414624
subclass of: SO_0000673
so part of: LOC117414624
location: complement(116572..116756)
location: region:116572-116756:-1
so has part: feature:116572-116756:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:116572-116756:-1:exon

LOC117968081
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968081
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(120619..120801)
location: region:120619-120801:-1
so has part: feature:120619-120801:-1:exon
subclass of: SO_0000623

117968081
type: Gene
SIO_000068: ncbigene

position:120619:-1
position: 120619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120801:-1
position: 120801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120619-120801:-1:exon

LOC117968081
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968081
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662231.1
SIO_010081: LOC117968081
subclass of: SO_0000673
so part of: LOC117968081
location: complement(120619..120801)
location: region:120619-120801:-1
so has part: feature:120619-120801:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:120619-120801:-1:exon

LOC117417299
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117417299
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(125839..126033)
location: region:125839-126033:-1
so has part: feature:125839-126033:-1:exon
subclass of: SO_0000623

117417299
type: Gene
SIO_000068: ncbigene

position:125839:-1
position: 125839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126033:-1
position: 126033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125839-126033:-1:exon

LOC117417299
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117417299
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662232.1
SIO_010081: LOC117417299
subclass of: SO_0000673
so part of: LOC117417299
location: complement(125839..126033)
location: region:125839-126033:-1
so has part: feature:125839-126033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125839-126033:-1:exon

LOC117968086
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968086
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(135659..135856)
location: region:135659-135856:-1
so has part: feature:135659-135856:-1:exon
subclass of: SO_0000623

117968086
type: Gene
SIO_000068: ncbigene

position:135659:-1
position: 135659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135856:-1
position: 135856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135659-135856:-1:exon

LOC117968086
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968086
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662236.1
SIO_010081: LOC117968086
subclass of: SO_0000673
so part of: LOC117968086
location: complement(135659..135856)
location: region:135659-135856:-1
so has part: feature:135659-135856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:135659-135856:-1:exon

LOC117968065
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968065
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(142379..142493)
location: region:142379-142493:-1
so has part: feature:142379-142493:-1:exon
subclass of: SO_0000623

117968065
type: Gene
SIO_000068: ncbigene

position:142379:-1
position: 142379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142493:-1
position: 142493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142379-142493:-1:exon

LOC117968065
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968065
product: U5 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00020
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662215.1
SIO_010081: LOC117968065
subclass of: SO_0000673
so part of: LOC117968065
location: complement(142379..142493)
location: region:142379-142493:-1
so has part: feature:142379-142493:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142379-142493:-1:exon

LOC117968077
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968077
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(142929..143122)
location: region:142929-143122:-1
so has part: feature:142929-143122:-1:exon
subclass of: SO_0000623

117968077
type: Gene
SIO_000068: ncbigene

position:142929:-1
position: 142929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143122:-1
position: 143122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142929-143122:-1:exon

LOC117968077
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968077
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662224.1
SIO_010081: LOC117968077
subclass of: SO_0000673
so part of: LOC117968077
location: complement(142929..143122)
location: region:142929-143122:-1
so has part: feature:142929-143122:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142929-143122:-1:exon

LOC117968062
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968062
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(158988..159102)
location: region:158988-159102:-1
so has part: feature:158988-159102:-1:exon
subclass of: SO_0000623

117968062
type: Gene
SIO_000068: ncbigene

position:158988:-1
position: 158988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159102:-1
position: 159102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158988-159102:-1:exon

LOC117968062
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968062
product: U5 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00020
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662212.1
SIO_010081: LOC117968062
subclass of: SO_0000673
so part of: LOC117968062
location: complement(158988..159102)
location: region:158988-159102:-1
so has part: feature:158988-159102:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:158988-159102:-1:exon

LOC117968080
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968080
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(159541..159726)
location: region:159541-159726:-1
so has part: feature:159541-159726:-1:exon
subclass of: SO_0000623

117968080
type: Gene
SIO_000068: ncbigene

position:159541:-1
position: 159541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159726:-1
position: 159726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159541-159726:-1:exon

LOC117968080
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968080
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662230.1
SIO_010081: LOC117968080
subclass of: SO_0000673
so part of: LOC117968080
location: complement(159541..159726)
location: region:159541-159726:-1
so has part: feature:159541-159726:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159541-159726:-1:exon

LOC117968082
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968082
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(172049..172243)
location: region:172049-172243:-1
so has part: feature:172049-172243:-1:exon
subclass of: SO_0000623

117968082
type: Gene
SIO_000068: ncbigene

position:172049:-1
position: 172049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172243:-1
position: 172243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172049-172243:-1:exon

LOC117968082
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968082
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662233.1
SIO_010081: LOC117968082
subclass of: SO_0000673
so part of: LOC117968082
location: complement(172049..172243)
location: region:172049-172243:-1
so has part: feature:172049-172243:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172049-172243:-1:exon

LOC117968063
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968063
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(178217..178331)
location: region:178217-178331:-1
so has part: feature:178217-178331:-1:exon
subclass of: SO_0000623

117968063
type: Gene
SIO_000068: ncbigene

position:178217:-1
position: 178217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178331:-1
position: 178331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178217-178331:-1:exon

LOC117968063
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968063
product: U5 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00020
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662213.1
SIO_010081: LOC117968063
subclass of: SO_0000673
so part of: LOC117968063
location: complement(178217..178331)
location: region:178217-178331:-1
so has part: feature:178217-178331:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:178217-178331:-1:exon

LOC117968093
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968093
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(178751..178955)
location: region:178751-178955:-1
so has part: feature:178751-178955:-1:exon

117968093
type: Gene
SIO_000068: ncbigene

position:178751:-1
position: 178751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178955:-1
position: 178955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178751-178955:-1:exon

LOC117968093
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968093
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117968093
subclass of: SO_0000673
so part of: LOC117968093
location: complement(178751..178955)
location: region:178751-178955:-1
so has part: feature:178751-178955:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:178751-178955:-1:exon

LOC117968057
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968057
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 180754..183385
location: region:180754-183385:1
so has part: feature:180754-183385:1:exon
subclass of: SO_0000011

117968057
type: Gene
SIO_000068: ncbigene

position:180754:1
position: 180754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183385:1
position: 183385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180754-183385:1:exon

LOC117968057
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117968057
product: uncharacterized LOC117968057
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004662210.1
SIO_010081: LOC117968057
subclass of: SO_0000673
so part of: LOC117968057
location: join(180754..180814,181491..183385)
location: region:180754-183385:1
so has part: feature:180754-180814:1:exon
so has part: feature:181491-183385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:180754-180814:1:exon

position:180814:1
position: 180814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:181491-183385:1:exon

position:181491:1
position: 181491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117968079
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968079
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(193413..193623)
location: region:193413-193623:-1
so has part: feature:193413-193623:-1:exon

117968079
type: Gene
SIO_000068: ncbigene

position:193413:-1
position: 193413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193623:-1
position: 193623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193413-193623:-1:exon

LOC117968079
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968079
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117968079
subclass of: SO_0000673
so part of: LOC117968079
location: complement(193413..193623)
location: region:193413-193623:-1
so has part: feature:193413-193623:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193413-193623:-1:exon

LOC117414549
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117414549
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(206787..206972)
location: region:206787-206972:-1
so has part: feature:206787-206972:-1:exon
subclass of: SO_0000623

117414549
type: Gene
SIO_000068: ncbigene

position:206787:-1
position: 206787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206972:-1
position: 206972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206787-206972:-1:exon

LOC117414549
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117414549
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004546266.2
SIO_010081: LOC117414549
subclass of: SO_0000673
so part of: LOC117414549
location: complement(206787..206972)
location: region:206787-206972:-1
so has part: feature:206787-206972:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206787-206972:-1:exon

LOC117968089
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968089
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 221408..221549
location: region:221408-221549:1
so has part: feature:221408-221549:1:exon

117968089
type: Gene
SIO_000068: ncbigene

position:221408:1
position: 221408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221549:1
position: 221549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221408-221549:1:exon

LOC117968089
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968089
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117968089
subclass of: SO_0000673
so part of: LOC117968089
location: 221408..221549
location: region:221408-221549:1
so has part: feature:221408-221549:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:221408-221549:1:exon

LOC117968072
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968072
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 234764..234958
location: region:234764-234958:1
so has part: feature:234764-234958:1:exon
subclass of: SO_0000623

117968072
type: Gene
SIO_000068: ncbigene

position:234764:1
position: 234764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234958:1
position: 234958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234764-234958:1:exon

LOC117968072
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968072
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662221.1
SIO_010081: LOC117968072
subclass of: SO_0000673
so part of: LOC117968072
location: 234764..234958
location: region:234764-234958:1
so has part: feature:234764-234958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:234764-234958:1:exon

LOC117968087
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968087
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 245978..246159
location: region:245978-246159:1
so has part: feature:245978-246159:1:exon
subclass of: SO_0000623

117968087
type: Gene
SIO_000068: ncbigene

position:245978:1
position: 245978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246159:1
position: 246159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245978-246159:1:exon

LOC117968087
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968087
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662237.1
SIO_010081: LOC117968087
subclass of: SO_0000673
so part of: LOC117968087
location: 245978..246159
location: region:245978-246159:1
so has part: feature:245978-246159:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:245978-246159:1:exon

LOC117968078
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968078
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 251923..252118
location: region:251923-252118:1
so has part: feature:251923-252118:1:exon
subclass of: SO_0000623

117968078
type: Gene
SIO_000068: ncbigene

position:251923:1
position: 251923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252118:1
position: 252118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251923-252118:1:exon

LOC117968078
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968078
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662225.1
SIO_010081: LOC117968078
subclass of: SO_0000673
so part of: LOC117968078
location: 251923..252118
location: region:251923-252118:1
so has part: feature:251923-252118:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:251923-252118:1:exon

LOC117968055
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 272568..275958
location: region:272568-275958:1
so has part: feature:272568-275958:1:exon
subclass of: SO_0000011

117968055
type: Gene
SIO_000068: ncbigene

position:272568:1
position: 272568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275958:1
position: 275958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272568-275958:1:exon

LOC117968055
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117968055
product: uncharacterized LOC117968055
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004662209.1
SIO_010081: LOC117968055
subclass of: SO_0000673
so part of: LOC117968055
location: join(272568..272987,274692..274799,275271..275958)
location: region:272568-275958:1
so has part: feature:272568-272987:1:exon
so has part: feature:274692-274799:1:exon
so has part: feature:275271-275958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272568-272987:1:exon

position:272987:1
position: 272987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274692-274799:1:exon

position:274692:1
position: 274692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274799:1
position: 274799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:275271-275958:1:exon

position:275271:1
position: 275271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117418661
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117418661
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 297858..298056
location: region:297858-298056:1
so has part: feature:297858-298056:1:exon
subclass of: SO_0000623

117418661
type: Gene
SIO_000068: ncbigene

position:297858:1
position: 297858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298056:1
position: 298056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297858-298056:1:exon

LOC117418661
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117418661
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004546849.2
SIO_010081: LOC117418661
subclass of: SO_0000673
so part of: LOC117418661
location: 297858..298056
location: region:297858-298056:1
so has part: feature:297858-298056:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:297858-298056:1:exon

LOC117968085
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968085
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 305095..305265
location: region:305095-305265:1
so has part: feature:305095-305265:1:exon

117968085
type: Gene
SIO_000068: ncbigene

position:305095:1
position: 305095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305265:1
position: 305265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305095-305265:1:exon

LOC117968085
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968085
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117968085
subclass of: SO_0000673
so part of: LOC117968085
location: 305095..305265
location: region:305095-305265:1
so has part: feature:305095-305265:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:305095-305265:1:exon

LOC117414422
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117414422
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 305919..306114
location: region:305919-306114:1
so has part: feature:305919-306114:1:exon
subclass of: SO_0000623

117414422
type: Gene
SIO_000068: ncbigene

position:305919:1
position: 305919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306114:1
position: 306114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305919-306114:1:exon

LOC117414422
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117414422
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004546224.2
SIO_010081: LOC117414422
subclass of: SO_0000673
so part of: LOC117414422
location: 305919..306114
location: region:305919-306114:1
so has part: feature:305919-306114:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:305919-306114:1:exon

LOC117968069
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968069
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 309450..309645
location: region:309450-309645:1
so has part: feature:309450-309645:1:exon
subclass of: SO_0000623

117968069
type: Gene
SIO_000068: ncbigene

position:309450:1
position: 309450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309645:1
position: 309645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309450-309645:1:exon

LOC117968069
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968069
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662219.1
SIO_010081: LOC117968069
subclass of: SO_0000673
so part of: LOC117968069
location: 309450..309645
location: region:309450-309645:1
so has part: feature:309450-309645:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309450-309645:1:exon

LOC117968073
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968073
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 310247..310437
location: region:310247-310437:1
so has part: feature:310247-310437:1:exon
subclass of: SO_0000623

117968073
type: Gene
SIO_000068: ncbigene

position:310247:1
position: 310247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310437:1
position: 310437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310247-310437:1:exon

LOC117968073
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968073
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662222.1
SIO_010081: LOC117968073
subclass of: SO_0000673
so part of: LOC117968073
location: 310247..310437
location: region:310247-310437:1
so has part: feature:310247-310437:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:310247-310437:1:exon

LOC117968054
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968054
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(312376..316473)
location: region:312376-316473:-1
so has part: feature:312376-316473:-1:exon
subclass of: SO_0000010

117968054
type: Gene
SIO_000068: ncbigene

position:312376:-1
position: 312376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316473:-1
position: 316473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312376-316473:-1:exon

LOC117968054
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117968054
product: uncharacterized LOC117968054, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034915638.1
SIO_010081: LOC117968054
subclass of: SO_0000673
so part of: LOC117968054
location: complement(join(312376..312637,312791..312864,313034..313373,313709..313819,313953..314229,314673..315008,315674..315723,316109..316473))
location: region:312376-316473:-1
so has part: feature:316109-316473:-1:exon
so has part: feature:315674-315723:-1:exon
so has part: feature:314673-315008:-1:exon
so has part: feature:313953-314229:-1:exon
so has part: feature:313709-313819:-1:exon
so has part: feature:313034-313373:-1:exon
so has part: feature:312791-312864:-1:exon
so has part: feature:312376-312637:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:316109-316473:-1:exon

position:316109:-1
position: 316109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315674-315723:-1:exon

position:315674:-1
position: 315674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315723:-1
position: 315723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:314673-315008:-1:exon

position:314673:-1
position: 314673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315008:-1
position: 315008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:313953-314229:-1:exon

position:313953:-1
position: 313953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314229:-1
position: 314229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:313709-313819:-1:exon

position:313709:-1
position: 313709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313819:-1
position: 313819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:313034-313373:-1:exon

position:313034:-1
position: 313034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313373:-1
position: 313373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:312791-312864:-1:exon

position:312791:-1
position: 312791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312864:-1
position: 312864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:312376-312637:-1:exon

position:312637:-1
position: 312637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117968054
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117968054
product: uncharacterized LOC117968054, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034915640.1
SIO_010081: LOC117968054
subclass of: SO_0000673
so part of: LOC117968054
location: complement(join(312376..312637,312791..312864,313034..313373,313709..313819,313953..314229,314433..314632))
location: region:312376-314632:-1
so has part: feature:314433-314632:-1:exon
so has part: feature:313953-314229:-1:exon
so has part: feature:313709-313819:-1:exon
so has part: feature:313034-313373:-1:exon
so has part: feature:312791-312864:-1:exon
so has part: feature:312376-312637:-1:exon

position:314632:-1
position: 314632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314433-314632:-1:exon

position:314433:-1
position: 314433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:313953-314229:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:313709-313819:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313034-313373:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312791-312864:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312376-312637:-1:exon

LOC117968054
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117968054
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117968054
translation: MMLSKLTRSFTEEETICCTVWNQPLQEHKTNCMRVTPGQETDDQHIIMTSTLIPVTLFILACCVGFMIYRYHYKGRRNLARKQKRISNCSDDTAIILIGKPKHGVPSLINSCVFAYKAEEPFANWAGADKDPPHYAQPEEVPLTERITITRALLQQQDRFWTSERDSYLDNWRREEQSHRRPFVFVHSCTEMLTTVAKDEIKELFEDIKSVMGSHPFTGLTKKNQGHAEELVPFFHSLGSKRVFAFHNYTIQEHKRTPKRDEEFLDFMNACIEETDSETVRLIEDV
SIO_010081: LOC117968054
subclass of: SO_0000673
so part of: LOC117968054
location: complement(join(312414..312637,312791..312864,313034..313373,313709..313819,313953..314064))
location: region:312414-314064:-1
so has part: feature:313953-314064:-1:exon
so has part: feature:313709-313819:-1:exon
so has part: feature:313034-313373:-1:exon
so has part: feature:312791-312864:-1:exon
so has part: feature:312414-312637:-1:exon

XP_034771529.1
type: Protein
SIO_000068: ncbiprotein

position:312414:-1
position: 312414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314064:-1
position: 314064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313953-314064:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313709-313819:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:313034-313373:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:312791-312864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312414-312637:-1:exon

LOC117968054
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117968054
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117968054
translation: MMLSKLTRSFTEEETICCTVWNQPLQEHKTNCMRVTPGQETDDQHIIMTSTLIPVTLFILACCVGFMIYRYHYKGRRNLARKQKRISNCSDDTAIILIGKPKHGVPSLINSCVFAYKAEEPFANWAGADKDPPHYAQPEEVPLTERITITRALLQQQDRFWTSERDSYLDNWRREEQSHRRPFVFVHSCTEMLTTVAKDEIKELFEDIKSVMGSHPFTGLTKKNQGHAEELVPFFHSLGSKRVFAFHNYTIQEHKRTPKRDEEFLDFMNACIEETDSETVRLIEDV
SIO_010081: LOC117968054
subclass of: SO_0000673
so part of: LOC117968054
location: complement(join(312414..312637,312791..312864,313034..313373,313709..313819,313953..314064))
location: region:312414-314064:-1
so has part: feature:313953-314064:-1:exon
so has part: feature:313709-313819:-1:exon
so has part: feature:313034-313373:-1:exon
so has part: feature:312791-312864:-1:exon
so has part: feature:312414-312637:-1:exon

XP_034771531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313953-314064:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313709-313819:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:313034-313373:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:312791-312864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312414-312637:-1:exon

LOC117968067
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968067
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(317657..317730)
location: region:317657-317730:-1
so has part: feature:317657-317730:-1:exon
subclass of: SO_0000578

117968067
type: Gene
SIO_000068: ncbigene

position:317657:-1
position: 317657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317730:-1
position: 317730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317657-317730:-1:exon

LOC117968067
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snoRNA
gene: LOC117968067
product: small nucleolar RNA SNORD30
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00088
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662217.1
SIO_010081: LOC117968067
subclass of: SO_0000673
so part of: LOC117968067
location: complement(317657..317730)
location: region:317657-317730:-1
so has part: feature:317657-317730:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317657-317730:-1:exon

LOC117398741
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398741
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(318852..318926)
location: region:318852-318926:-1
so has part: feature:318852-318926:-1:exon

117398741
type: Gene
SIO_000068: ncbigene

position:318852:-1
position: 318852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318926:-1
position: 318926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318852-318926:-1:exon

LOC117398741
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398741
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00089
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117398741
subclass of: SO_0000673
so part of: LOC117398741
location: complement(318852..318926)
location: region:318852-318926:-1
so has part: feature:318852-318926:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:318852-318926:-1:exon

LOC117968066
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968066
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(319629..319697)
location: region:319629-319697:-1
so has part: feature:319629-319697:-1:exon
subclass of: SO_0000578

117968066
type: Gene
SIO_000068: ncbigene

position:319629:-1
position: 319629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319697:-1
position: 319697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319629-319697:-1:exon

LOC117968066
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snoRNA
gene: LOC117968066
product: small nucleolar RNA SNORD30
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00088
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662216.1
SIO_010081: LOC117968066
subclass of: SO_0000673
so part of: LOC117968066
location: complement(319629..319697)
location: region:319629-319697:-1
so has part: feature:319629-319697:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:319629-319697:-1:exon

LOC117968088
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968088
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(321075..321229)
location: region:321075-321229:-1
so has part: feature:321075-321229:-1:exon

117968088
type: Gene
SIO_000068: ncbigene

position:321075:-1
position: 321075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321229:-1
position: 321229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321075-321229:-1:exon

LOC117968088
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968088
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117968088
subclass of: SO_0000673
so part of: LOC117968088
location: complement(321075..321229)
location: region:321075-321229:-1
so has part: feature:321075-321229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:321075-321229:-1:exon

LOC117398655
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 325488..330518
location: region:325488-330518:1
so has part: feature:325488-330518:1:exon
subclass of: SO_0000010

117398655
type: Gene
SIO_000068: ncbigene

position:325488:1
position: 325488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330518:1
position: 330518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325488-330518:1:exon

LOC117398655
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398655
product: transmembrane protein 179B-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034915635.1
SIO_010081: LOC117398655
subclass of: SO_0000673
so part of: LOC117398655
location: join(325488..325512,327398..327591,328312..328446,329482..329560,330066..330518)
location: region:325488-330518:1
so has part: feature:325488-325512:1:exon
so has part: feature:327398-327591:1:exon
so has part: feature:328312-328446:1:exon
so has part: feature:329482-329560:1:exon
so has part: feature:330066-330518:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:325488-325512:1:exon

position:325512:1
position: 325512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:327398-327591:1:exon

position:327398:1
position: 327398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327591:1
position: 327591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:328312-328446:1:exon

position:328312:1
position: 328312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328446:1
position: 328446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:329482-329560:1:exon

position:329482:1
position: 329482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329560:1
position: 329560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:330066-330518:1:exon

position:330066:1
position: 330066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398655
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398655
product: transmembrane protein 179B-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034915634.1
SIO_010081: LOC117398655
subclass of: SO_0000673
so part of: LOC117398655
location: join(326614..327591,328312..328446,329482..329560,330066..330518)
location: region:326614-330518:1
so has part: feature:326614-327591:1:exon
so has part: feature:328312-328446:1:exon
so has part: feature:329482-329560:1:exon
so has part: feature:330066-330518:1:exon

position:326614:1
position: 326614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326614-327591:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328312-328446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329482-329560:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:330066-330518:1:exon

LOC117398655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 179B-like
translation: MLYGSVGYNATSEEFSVSSSSNASLCLFVSIISGLISIYCFFVVLYCIYASCVGGVQRGSVGVTLSLALAASFLFFLLISGCILNIGLNSLCQSITTAKDLKSCQDAQSKNWSEPYKAYQFYTSLHNAEVSAWVNFFLWVVTLILLIVQRKRGAQYTQLSGAGDFERSTATQLSGAGDFERSTATQLSGAGDFERSIGVTDLIIPRLPRPRRWRRGGRGRRWRRWRR
SIO_010081: LOC117398655
subclass of: SO_0000673
so part of: LOC117398655
location: join(327419..327591,328312..328446,329482..329560,330066..330362)
location: region:327419-330362:1
so has part: feature:327419-327591:1:exon
so has part: feature:328312-328446:1:exon
so has part: feature:329482-329560:1:exon
so has part: feature:330066-330362:1:exon

XP_034771525.1
type: Protein
SIO_000068: ncbiprotein

position:327419:1
position: 327419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330362:1
position: 330362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327419-327591:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328312-328446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329482-329560:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:330066-330362:1:exon

LOC117398655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 179B-like
translation: MLYGSVGYNATSEEFSVSSSSNASLCLFVSIISGLISIYCFFVVLYCIYASCVGGVQRGSVGVTLSLALAASFLFFLLISGCILNIGLNSLCQSITTAKDLKSCQDAQSKNWSEPYKAYQFYTSLHNAEVSAWVNFFLWVVTLILLIVQRKRGAQYTQLSGAGDFERSTATQLSGAGDFERSTATQLSGAGDFERSIGVTDLIIPRLPRPRRWRRGGRGRRWRRWRR
SIO_010081: LOC117398655
subclass of: SO_0000673
so part of: LOC117398655
location: join(327419..327591,328312..328446,329482..329560,330066..330362)
location: region:327419-330362:1
so has part: feature:327419-327591:1:exon
so has part: feature:328312-328446:1:exon
so has part: feature:329482-329560:1:exon
so has part: feature:330066-330362:1:exon

XP_034771526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327419-327591:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328312-328446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329482-329560:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:330066-330362:1:exon

LOC117968056
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(331393..339200)
location: region:331393-339200:-1
so has part: feature:331393-339200:-1:exon

117968056
type: Gene
SIO_000068: ncbigene

position:331393:-1
position: 331393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339200:-1
position: 339200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331393-339200:-1:exon

LOC117968056
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968056
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117968056
subclass of: SO_0000673
so part of: LOC117968056
location: complement(331393..332173)
location: region:331393-332173:-1
so has part: feature:331393-332173:-1:exon

position:332173:-1
position: 332173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331393-332173:-1:exon

LOC117968056
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968056
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117968056
subclass of: SO_0000673
so part of: LOC117968056
location: complement(332331..332447)
location: region:332331-332447:-1
so has part: feature:332331-332447:-1:exon

position:332331:-1
position: 332331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332447:-1
position: 332447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332331-332447:-1:exon

LOC117968056
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968056
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117968056
subclass of: SO_0000673
so part of: LOC117968056
location: complement(332971..333102)
location: region:332971-333102:-1
so has part: feature:332971-333102:-1:exon

position:332971:-1
position: 332971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333102:-1
position: 333102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332971-333102:-1:exon

LOC117968056
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968056
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117968056
subclass of: SO_0000673
so part of: LOC117968056
location: complement(333415..333537)
location: region:333415-333537:-1
so has part: feature:333415-333537:-1:exon

position:333415:-1
position: 333415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333537:-1
position: 333537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333415-333537:-1:exon

LOC117968056
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968056
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117968056
subclass of: SO_0000673
so part of: LOC117968056
location: complement(333662..333751)
location: region:333662-333751:-1
so has part: feature:333662-333751:-1:exon

position:333662:-1
position: 333662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333751:-1
position: 333751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333662-333751:-1:exon

LOC117968056
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968056
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117968056
subclass of: SO_0000673
so part of: LOC117968056
location: complement(333848..333937)
location: region:333848-333937:-1
so has part: feature:333848-333937:-1:exon

position:333848:-1
position: 333848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333937:-1
position: 333937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333848-333937:-1:exon

LOC117968056
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968056
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117968056
subclass of: SO_0000673
so part of: LOC117968056
location: complement(334673..334861)
location: region:334673-334861:-1
so has part: feature:334673-334861:-1:exon

position:334673:-1
position: 334673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334861:-1
position: 334861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334673-334861:-1:exon

LOC117968056
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968056
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117968056
subclass of: SO_0000673
so part of: LOC117968056
location: complement(336427..336584)
location: region:336427-336584:-1
so has part: feature:336427-336584:-1:exon

position:336427:-1
position: 336427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336584:-1
position: 336584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336427-336584:-1:exon

LOC117968056
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968056
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117968056
subclass of: SO_0000673
so part of: LOC117968056
location: complement(337300..337437)
location: region:337300-337437:-1
so has part: feature:337300-337437:-1:exon

position:337300:-1
position: 337300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337437:-1
position: 337437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337300-337437:-1:exon

LOC117968056
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968056
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117968056
subclass of: SO_0000673
so part of: LOC117968056
location: complement(339141..339200)
location: region:339141-339200:-1
so has part: feature:339141-339200:-1:exon

position:339141:-1
position: 339141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339141-339200:-1:exon

LOC117968070
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968070
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(340142..340263)
location: region:340142-340263:-1
so has part: feature:340142-340263:-1:exon

117968070
type: Gene
SIO_000068: ncbigene

position:340142:-1
position: 340142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340263:-1
position: 340263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340142-340263:-1:exon

LOC117968070
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968070
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117968070
subclass of: SO_0000673
so part of: LOC117968070
location: complement(340142..340263)
location: region:340142-340263:-1
so has part: feature:340142-340263:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340142-340263:-1:exon

LOC117968090
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968090
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(340857..341038)
location: region:340857-341038:-1
so has part: feature:340857-341038:-1:exon
subclass of: SO_0000623

117968090
type: Gene
SIO_000068: ncbigene

position:340857:-1
position: 340857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341038:-1
position: 341038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340857-341038:-1:exon

LOC117968090
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968090
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662238.1
SIO_010081: LOC117968090
subclass of: SO_0000673
so part of: LOC117968090
location: complement(340857..341038)
location: region:340857-341038:-1
so has part: feature:340857-341038:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340857-341038:-1:exon

LOC117968061
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968061
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(344393..344459)
location: region:344393-344459:-1
so has part: feature:344393-344459:-1:exon

117968061
type: Gene
SIO_000068: ncbigene

position:344393:-1
position: 344393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344459:-1
position: 344459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344393-344459:-1:exon

LOC117968061
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968061
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117968061
subclass of: SO_0000673
so part of: LOC117968061
location: complement(344393..344459)
location: region:344393-344459:-1
so has part: feature:344393-344459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344393-344459:-1:exon

LOC117414783
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117414783
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(345230..345389)
location: region:345230-345389:-1
so has part: feature:345230-345389:-1:exon

117414783
type: Gene
SIO_000068: ncbigene

position:345230:-1
position: 345230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345389:-1
position: 345389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345230-345389:-1:exon

LOC117414783
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117414783
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117414783
subclass of: SO_0000673
so part of: LOC117414783
location: complement(345230..345389)
location: region:345230-345389:-1
so has part: feature:345230-345389:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:345230-345389:-1:exon

LOC117414739
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117414739
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(352272..352396)
location: region:352272-352396:-1
so has part: feature:352272-352396:-1:exon

117414739
type: Gene
SIO_000068: ncbigene

position:352272:-1
position: 352272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352396:-1
position: 352396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352272-352396:-1:exon

LOC117414739
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117414739
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117414739
subclass of: SO_0000673
so part of: LOC117414739
location: complement(352272..352396)
location: region:352272-352396:-1
so has part: feature:352272-352396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352272-352396:-1:exon

LOC117414595
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117414595
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(353013..353203)
location: region:353013-353203:-1
so has part: feature:353013-353203:-1:exon
subclass of: SO_0000623

117414595
type: Gene
SIO_000068: ncbigene

position:353013:-1
position: 353013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353203:-1
position: 353203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353013-353203:-1:exon

LOC117414595
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117414595
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662228.1
SIO_010081: LOC117414595
subclass of: SO_0000673
so part of: LOC117414595
location: complement(353013..353203)
location: region:353013-353203:-1
so has part: feature:353013-353203:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353013-353203:-1:exon

LOC117968068
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968068
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(353832..354024)
location: region:353832-354024:-1
so has part: feature:353832-354024:-1:exon
subclass of: SO_0000623

117968068
type: Gene
SIO_000068: ncbigene

position:353832:-1
position: 353832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354024:-1
position: 354024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353832-354024:-1:exon

LOC117968068
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968068
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662218.1
SIO_010081: LOC117968068
subclass of: SO_0000673
so part of: LOC117968068
location: complement(353832..354024)
location: region:353832-354024:-1
so has part: feature:353832-354024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353832-354024:-1:exon

LOC117968083
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968083
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(354666..354856)
location: region:354666-354856:-1
so has part: feature:354666-354856:-1:exon
subclass of: SO_0000623

117968083
type: Gene
SIO_000068: ncbigene

position:354666:-1
position: 354666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354856:-1
position: 354856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354666-354856:-1:exon

LOC117968083
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968083
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662234.1
SIO_010081: LOC117968083
subclass of: SO_0000673
so part of: LOC117968083
location: complement(354666..354856)
location: region:354666-354856:-1
so has part: feature:354666-354856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:354666-354856:-1:exon

LOC117968092
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968092
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(355462..355652)
location: region:355462-355652:-1
so has part: feature:355462-355652:-1:exon
subclass of: SO_0000623

117968092
type: Gene
SIO_000068: ncbigene

position:355462:-1
position: 355462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355652:-1
position: 355652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355462-355652:-1:exon

LOC117968092
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968092
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662239.1
SIO_010081: LOC117968092
subclass of: SO_0000673
so part of: LOC117968092
location: complement(355462..355652)
location: region:355462-355652:-1
so has part: feature:355462-355652:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355462-355652:-1:exon

LOC117414415
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117414415
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(362616..362745)
location: region:362616-362745:-1
so has part: feature:362616-362745:-1:exon

117414415
type: Gene
SIO_000068: ncbigene

position:362616:-1
position: 362616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362745:-1
position: 362745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362616-362745:-1:exon

LOC117414415
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117414415
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117414415
subclass of: SO_0000673
so part of: LOC117414415
location: complement(362616..362745)
location: region:362616-362745:-1
so has part: feature:362616-362745:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362616-362745:-1:exon

LOC117968076
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968076
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(368597..368790)
location: region:368597-368790:-1
so has part: feature:368597-368790:-1:exon
subclass of: SO_0000623

117968076
type: Gene
SIO_000068: ncbigene

position:368597:-1
position: 368597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368790:-1
position: 368790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368597-368790:-1:exon

LOC117968076
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968076
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662223.1
SIO_010081: LOC117968076
subclass of: SO_0000673
so part of: LOC117968076
location: complement(368597..368790)
location: region:368597-368790:-1
so has part: feature:368597-368790:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368597-368790:-1:exon

LOC117968094
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968094
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(369412..369546)
location: region:369412-369546:-1
so has part: feature:369412-369546:-1:exon

117968094
type: Gene
SIO_000068: ncbigene

position:369412:-1
position: 369412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369546:-1
position: 369546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369412-369546:-1:exon

LOC117968094
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968094
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117968094
subclass of: SO_0000673
so part of: LOC117968094
location: complement(369412..369546)
location: region:369412-369546:-1
so has part: feature:369412-369546:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:369412-369546:-1:exon

LOC117968060
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968060
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(383679..383869)
location: region:383679-383869:-1
so has part: feature:383679-383869:-1:exon
subclass of: SO_0000623

117968060
type: Gene
SIO_000068: ncbigene

position:383679:-1
position: 383679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383869:-1
position: 383869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383679-383869:-1:exon

LOC117968060
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968060
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662211.1
SIO_010081: LOC117968060
subclass of: SO_0000673
so part of: LOC117968060
location: complement(383679..383869)
location: region:383679-383869:-1
so has part: feature:383679-383869:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:383679-383869:-1:exon

LOC117968074
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968074
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(384487..384687)
location: region:384487-384687:-1
so has part: feature:384487-384687:-1:exon

117968074
type: Gene
SIO_000068: ncbigene

position:384487:-1
position: 384487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384687:-1
position: 384687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384487-384687:-1:exon

LOC117968074
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968074
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117968074
subclass of: SO_0000673
so part of: LOC117968074
location: complement(384487..384687)
location: region:384487-384687:-1
so has part: feature:384487-384687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:384487-384687:-1:exon

LOC117418666
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117418666
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(439357..439569)
location: region:439357-439569:-1
so has part: feature:439357-439569:-1:exon

117418666
type: Gene
SIO_000068: ncbigene

position:439357:-1
position: 439357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439569:-1
position: 439569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439357-439569:-1:exon

LOC117418666
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117418666
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117418666
subclass of: SO_0000673
so part of: LOC117418666
location: complement(439357..439569)
location: region:439357-439569:-1
so has part: feature:439357-439569:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:439357-439569:-1:exon

LOC117968058
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968058
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(447732..447876)
location: region:447732-447876:-1
so has part: feature:447732-447876:-1:exon

117968058
type: Gene
SIO_000068: ncbigene

position:447732:-1
position: 447732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447876:-1
position: 447876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447732-447876:-1:exon

LOC117968058
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117968058
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117968058
subclass of: SO_0000673
so part of: LOC117968058
location: complement(447732..447876)
location: region:447732-447876:-1
so has part: feature:447732-447876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:447732-447876:-1:exon

LOC117414554
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117414554
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(453938..454128)
location: region:453938-454128:-1
so has part: feature:453938-454128:-1:exon
subclass of: SO_0000623

117414554
type: Gene
SIO_000068: ncbigene

position:453938:-1
position: 453938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454128:-1
position: 454128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453938-454128:-1:exon

LOC117414554
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117414554
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662229.1
SIO_010081: LOC117414554
subclass of: SO_0000673
so part of: LOC117414554
location: complement(453938..454128)
location: region:453938-454128:-1
so has part: feature:453938-454128:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453938-454128:-1:exon

LOC117968071
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117968071
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(462606..462787)
location: region:462606-462787:-1
so has part: feature:462606-462787:-1:exon
subclass of: SO_0000623

117968071
type: Gene
SIO_000068: ncbigene

position:462606:-1
position: 462606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462787:-1
position: 462787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462606-462787:-1:exon

LOC117968071
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117968071
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662220.1
SIO_010081: LOC117968071
subclass of: SO_0000673
so part of: LOC117968071
location: complement(462606..462787)
location: region:462606-462787:-1
so has part: feature:462606-462787:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:462606-462787:-1:exon

trnal-uaa
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnal-uaa
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 665920..666004
location: region:665920-666004:1
so has part: feature:665920-666004:1:exon
subclass of: SO_0000663

117418705
type: Gene
SIO_000068: ncbigene

position:665920:1
position: 665920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666004:1
position: 666004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665920-666004:1:exon

trnal-uaa
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnal-uaa
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon UAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:665953..665955,aa:Leu,seq:taa)
SIO_010081: trnal-uaa
subclass of: SO_0000673
so part of: trnal-uaa
location: 665920..666004
location: region:665920-666004:1
so has part: feature:665920-666004:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:665920-666004:1:exon

LOC117418359
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117418359
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(666974..668295)
location: region:666974-668295:-1
so has part: feature:666974-668295:-1:exon

117418359
type: Gene
SIO_000068: ncbigene

position:666974:-1
position: 666974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668295:-1
position: 668295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666974-668295:-1:exon

LOC117418359
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117418359
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117418359
subclass of: SO_0000673
so part of: LOC117418359
location: complement(666974..667344)
location: region:666974-667344:-1
so has part: feature:666974-667344:-1:exon

position:667344:-1
position: 667344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666974-667344:-1:exon

LOC117418359
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117418359
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117418359
subclass of: SO_0000673
so part of: LOC117418359
location: complement(667467..667578)
location: region:667467-667578:-1
so has part: feature:667467-667578:-1:exon

position:667467:-1
position: 667467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667578:-1
position: 667578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667467-667578:-1:exon

LOC117418359
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117418359
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117418359
subclass of: SO_0000673
so part of: LOC117418359
location: complement(667668..667780)
location: region:667668-667780:-1
so has part: feature:667668-667780:-1:exon

position:667668:-1
position: 667668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667780:-1
position: 667780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667668-667780:-1:exon

LOC117418359
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117418359
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117418359
subclass of: SO_0000673
so part of: LOC117418359
location: complement(667864..668295)
location: region:667864-668295:-1
so has part: feature:667864-668295:-1:exon

position:667864:-1
position: 667864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667864-668295:-1:exon

trnas-gcu
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnas-gcu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(670460..670541)
location: region:670460-670541:-1
so has part: feature:670460-670541:-1:exon
subclass of: SO_0000663

117418708
type: Gene
SIO_000068: ncbigene

position:670460:-1
position: 670460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670541:-1
position: 670541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670460-670541:-1:exon

trnas-gcu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnas-gcu
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon GCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(670506..670508),aa:Ser,seq:gct)
SIO_010081: trnas-gcu
subclass of: SO_0000673
so part of: trnas-gcu
location: complement(670460..670541)
location: region:670460-670541:-1
so has part: feature:670460-670541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:670460-670541:-1:exon

LOC117418676
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117418676
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(670903..671079)
location: region:670903-671079:-1
so has part: feature:670903-671079:-1:exon

117418676
type: Gene
SIO_000068: ncbigene

position:670903:-1
position: 670903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671079:-1
position: 671079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670903-671079:-1:exon

LOC117418676
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117418676
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117418676
subclass of: SO_0000673
so part of: LOC117418676
location: complement(670903..671079)
location: region:670903-671079:-1
so has part: feature:670903-671079:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:670903-671079:-1:exon

LOC117418689
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117418689
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(707779..707923)
location: region:707779-707923:-1
so has part: feature:707779-707923:-1:exon

117418689
type: Gene
SIO_000068: ncbigene

position:707779:-1
position: 707779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707923:-1
position: 707923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707779-707923:-1:exon

LOC117418689
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117418689
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117418689
subclass of: SO_0000673
so part of: LOC117418689
location: complement(707779..707923)
location: region:707779-707923:-1
so has part: feature:707779-707923:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:707779-707923:-1:exon

LOC117418683
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117418683
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(730202..730397)
location: region:730202-730397:-1
so has part: feature:730202-730397:-1:exon
subclass of: SO_0000623

117418683
type: Gene
SIO_000068: ncbigene

position:730202:-1
position: 730202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730397:-1
position: 730397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730202-730397:-1:exon

LOC117418683
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117418683
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004546863.1
SIO_010081: LOC117418683
subclass of: SO_0000673
so part of: LOC117418683
location: complement(730202..730397)
location: region:730202-730397:-1
so has part: feature:730202-730397:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:730202-730397:-1:exon

LOC117418667
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117418667
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(743540..743739)
location: region:743540-743739:-1
so has part: feature:743540-743739:-1:exon
subclass of: SO_0000623

117418667
type: Gene
SIO_000068: ncbigene

position:743540:-1
position: 743540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743739:-1
position: 743739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743540-743739:-1:exon

LOC117418667
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117418667
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004662226.1
SIO_010081: LOC117418667
subclass of: SO_0000673
so part of: LOC117418667
location: complement(743540..743739)
location: region:743540-743739:-1
so has part: feature:743540-743739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743540-743739:-1:exon

LOC117418659
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117418659
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(754782..754963)
location: region:754782-754963:-1
so has part: feature:754782-754963:-1:exon
subclass of: SO_0000623

117418659
type: Gene
SIO_000068: ncbigene

position:754782:-1
position: 754782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754963:-1
position: 754963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754782-754963:-1:exon

LOC117418659
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117418659
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004546847.1
SIO_010081: LOC117418659
subclass of: SO_0000673
so part of: LOC117418659
location: complement(754782..754963)
location: region:754782-754963:-1
so has part: feature:754782-754963:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:754782-754963:-1:exon

LOC117418688
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117418688
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(769195..769321)
location: region:769195-769321:-1
so has part: feature:769195-769321:-1:exon

117418688
type: Gene
SIO_000068: ncbigene

position:769195:-1
position: 769195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769321:-1
position: 769321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:769195-769321:-1:exon

LOC117418688
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117418688
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117418688
subclass of: SO_0000673
so part of: LOC117418688
location: complement(769195..769321)
location: region:769195-769321:-1
so has part: feature:769195-769321:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:769195-769321:-1:exon

LOC117418635
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117418635
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(774852..774967)
location: region:774852-774967:-1
so has part: feature:774852-774967:-1:exon
subclass of: SO_0000623

117418635
type: Gene
SIO_000068: ncbigene

position:774852:-1
position: 774852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774967:-1
position: 774967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774852-774967:-1:exon

LOC117418635
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117418635
product: U5 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00020
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004546826.2
SIO_010081: LOC117418635
subclass of: SO_0000673
so part of: LOC117418635
location: complement(774852..774967)
location: region:774852-774967:-1
so has part: feature:774852-774967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:774852-774967:-1:exon

LOC117417979
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117417979
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(854702..864761)
location: region:854702-864761:-1
so has part: feature:854702-864761:-1:exon
subclass of: SO_0000010

117417979
type: Gene
SIO_000068: ncbigene

position:854702:-1
position: 854702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864761:-1
position: 864761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854702-864761:-1:exon

LOC117417979
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117417979
product: uncharacterized LOC117417979, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034915637.1
SIO_010081: LOC117417979
subclass of: SO_0000673
so part of: LOC117417979
location: complement(join(854702..856296,856429..856551,856673..856762,856955..857086,857746..857941,864239..864761))
location: region:854702-864761:-1
so has part: feature:864239-864761:-1:exon
so has part: feature:857746-857941:-1:exon
so has part: feature:856955-857086:-1:exon
so has part: feature:856673-856762:-1:exon
so has part: feature:856429-856551:-1:exon
so has part: feature:854702-856296:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:864239-864761:-1:exon

position:864239:-1
position: 864239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:857746-857941:-1:exon

position:857746:-1
position: 857746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857941:-1
position: 857941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:856955-857086:-1:exon

position:856955:-1
position: 856955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857086:-1
position: 857086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:856673-856762:-1:exon

position:856673:-1
position: 856673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856762:-1
position: 856762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:856429-856551:-1:exon

position:856429:-1
position: 856429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856551:-1
position: 856551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:854702-856296:-1:exon

position:856296:-1
position: 856296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117417979
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117417979
product: uncharacterized LOC117417979, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034915636.1
SIO_010081: LOC117417979
subclass of: SO_0000673
so part of: LOC117417979
location: complement(join(854702..856296,856429..856551,856673..856762,856955..857086,857746..857941,860197..860373,860638..860690))
location: region:854702-860690:-1
so has part: feature:860638-860690:-1:exon
so has part: feature:860197-860373:-1:exon
so has part: feature:857746-857941:-1:exon
so has part: feature:856955-857086:-1:exon
so has part: feature:856673-856762:-1:exon
so has part: feature:856429-856551:-1:exon
so has part: feature:854702-856296:-1:exon

position:860690:-1
position: 860690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:860638-860690:-1:exon

position:860638:-1
position: 860638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:860197-860373:-1:exon

position:860197:-1
position: 860197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860373:-1
position: 860373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:857746-857941:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:856955-857086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:856673-856762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:856429-856551:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:854702-856296:-1:exon

LOC117417979
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117417979
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117417979
translation: MEPHRKKTCKRKHIEITVDDSDNDDAVNGVQKNKKVSIDPSQTVSNSVVNSIIVPQNTLNSDPSTSSHTHSMSTPHNVRPHTVHPQNLACFENFDYLDKLLNDLNYNAYILPSIRALIDEISTDIPPINDNSTNIDNNNSQGPGFINDAKLTRINFDSLDKLLHEMSRENHGTIESVDDMEKQIGGGLNDGTYHDDSFSIKVPGGGVLHDDQVAGPSGLQAPHRDNDGARIGGEGVQRRHRPMFNNFELKHPLNFTHLYDLDSYAEVFTVLHETLENMLSEVSRTLRPADIVQLELQAGSLDIPVYVKMTGDNLSLDDFLSQIEALLQS
SIO_010081: LOC117417979
subclass of: SO_0000673
so part of: LOC117417979
location: complement(854924..855913)
location: region:854924-855913:-1
so has part: feature:854924-855913:-1:exon

XP_034771527.1
type: Protein
SIO_000068: ncbiprotein

position:854924:-1
position: 854924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855913:-1
position: 855913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854924-855913:-1:exon

LOC117417979
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117417979
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117417979
translation: MEPHRKKTCKRKHIEITVDDSDNDDAVNGVQKNKKVSIDPSQTVSNSVVNSIIVPQNTLNSDPSTSSHTHSMSTPHNVRPHTVHPQNLACFENFDYLDKLLNDLNYNAYILPSIRALIDEISTDIPPINDNSTNIDNNNSQGPGFINDAKLTRINFDSLDKLLHEMSRENHGTIESVDDMEKQIGGGLNDGTYHDDSFSIKVPGGGVLHDDQVAGPSGLQAPHRDNDGARIGGEGVQRRHRPMFNNFELKHPLNFTHLYDLDSYAEVFTVLHETLENMLSEVSRTLRPADIVQLELQAGSLDIPVYVKMTGDNLSLDDFLSQIEALLQS
SIO_010081: LOC117417979
subclass of: SO_0000673
so part of: LOC117417979
location: complement(854924..855913)
location: region:854924-855913:-1
so has part: feature:854924-855913:-1:exon

XP_034771528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:854924-855913:-1:exon

trnaa-agc
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnaa-agc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 865733..865805
location: region:865733-865805:1
so has part: feature:865733-865805:1:exon
subclass of: SO_0000663

117418709
type: Gene
SIO_000068: ncbigene

position:865733:1
position: 865733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865805:1
position: 865805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:865733-865805:1:exon

trnaa-agc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnaa-agc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon AGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:865766..865768,aa:Ala,seq:agc)
SIO_010081: trnaa-agc
subclass of: SO_0000673
so part of: trnaa-agc
location: 865733..865805
location: region:865733-865805:1
so has part: feature:865733-865805:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:865733-865805:1:exon