Acipenser ruthenus isolate Gen_M01 chromosome 49, ASM1064508v1, whole genome shotgun sequence.
type: Entry
definition: Acipenser ruthenus isolate Gen_M01 chromosome 49, ASM1064508v1, whole genome shotgun sequence.
sequence version: NC_048371.1
sequence date: 2020-06-05
sequence: sequence
division: CON
label: NC_048371.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA635364
dblink: SAMN12612932
keyword: WGS
keyword: RefSeq
source: Acipenser ruthenus (sterlet)
organism: Acipenser ruthenus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser.
reference: 1
references: 32231327
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021299.1.\nAssembly name: ASM1064508v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of Wuerzburg on\n2020/02/19. The original whole-genome shotgun project has the\naccession VTUV00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of Wuerzburg\nAssembly Method :: SmartDeNovo v. May-2017; 3D-DNA v. 180114\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 42.0x\nSequencing Technology :: Illumina NovaSeq; PacBio; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Acipenser ruthenus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 5536740
topology: linear
so has quality: SO_0000987
location: 1..5536740
location: region:1-5536740:1
RO_0002162: 7906

NC_048371
type: RefSeq
SIO_000068: refseq

PRJNA635364
type: BioProject
SIO_000068: bioproject

SAMN12612932
type: BioSample
SIO_000068: biosample

1
title: The sterlet sturgeon genome sequence and the mechanisms of segmental rediploidization
author: Du, K.
author: Stock, M.
author: Kneitz, S.
author: Klopp, C.
author: Woltering, J.M.
author: Adolfi, M.C.
author: Feron, R.
author: Prokopov, D.
author: Makunin, A.
author: Kichigin, I.
author: Schmidt, C.
author: Fischer, P.
author: Kuhl, H.
author: Wuertz, S.
author: Gessner, J.
author: Kloas, W.
author: Cabau, C.
author: Iampietro, C.
author: Parrinello, H.
author: Tomlinson, C.
author: Journot, L.
author: Postlethwait, J.H.
author: Braasch, I.
author: Trifonov, V.
author: Warren, W.C.
author: Meyer, A.
author: Guiguen, Y.
author: Schartl, M.
journal: Nat Ecol Evol (2020)
pubmed: 32231327

32231327
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5536740:1
position: 5536740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-5536740:1:source
so part of: sequence
organism: Acipenser ruthenus
mol type: genomic DNA
isolate: Gen_M01
isolation source: water
chromosome: 49
tissue type: testis, blood
country: Germany: IGB
lat lon: 52.448940 N 13.648750 E
collection date: 2018

7906
type: Taxonomy
SIO_000068: taxonomy

doc2a
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: doc2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 47181..140326
location: region:47181-140326:1
so has part: feature:47181-140326:1:exon
subclass of: SO_0000010

117399056
type: Gene
SIO_000068: ncbigene

position:47181:1
position: 47181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140326:1
position: 140326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47181-140326:1:exon

doc2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: doc2a
product: double C2-like domains, alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033998207.2
SIO_010081: doc2a
subclass of: SO_0000673
so part of: doc2a
location: join(47181..47518,48893..49164,55171..55250,78220..78294,85405..85514,108532..108658,122858..122917,126163..126320,126964..127045,138665..138761,139352..140326)
location: region:47181-140326:1
so has part: feature:47181-47518:1:exon
so has part: feature:48893-49164:1:exon
so has part: feature:55171-55250:1:exon
so has part: feature:78220-78294:1:exon
so has part: feature:85405-85514:1:exon
so has part: feature:108532-108658:1:exon
so has part: feature:122858-122917:1:exon
so has part: feature:126163-126320:1:exon
so has part: feature:126964-127045:1:exon
so has part: feature:138665-138761:1:exon
so has part: feature:139352-140326:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47181-47518:1:exon

position:47518:1
position: 47518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48893-49164:1:exon

position:48893:1
position: 48893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49164:1
position: 49164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:55171-55250:1:exon

position:55171:1
position: 55171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55250:1
position: 55250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:78220-78294:1:exon

position:78220:1
position: 78220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78294:1
position: 78294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:85405-85514:1:exon

position:85405:1
position: 85405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85514:1
position: 85514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:108532-108658:1:exon

position:108532:1
position: 108532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108658:1
position: 108658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:122858-122917:1:exon

position:122858:1
position: 122858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122917:1
position: 122917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:126163-126320:1:exon

position:126163:1
position: 126163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126320:1
position: 126320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:126964-127045:1:exon

position:126964:1
position: 126964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127045:1
position: 127045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:138665-138761:1:exon

position:138665:1
position: 138665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138761:1
position: 138761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:139352-140326:1:exon

position:139352:1
position: 139352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

doc2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: doc2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double C2-like domain-containing protein alpha
translation: MTVRRGNKLSVSIQEHMAIDVCPGPIRPIRQISDYFPRFSPTGAEGPVSPAGQGQGQGQVPGQGATGQPSLQSITDTSTEWDSCDSDDSTALGMLEFTLLYEKHTSSLHCTVIRAKGLKPMDFNGLADPYVKLHLLPGACKANKLKTRTVRNSLNPIWNETLTYCGITEEDMGRKTLRVSVCDEDKLTHNEFIGESRIALRRLKANQIKRFSICLEHLPPLPSPTAMSTALRGISCYLNEVEREEQRPLEERGRLLLSLQFLSGRGGLLVGILRCAHLAAMDVNGFSDPYVKTYLKPDVHKKSKHKTIVKKKTLNPEFNEEFFYETSHSELSTKTLEVTVWDYDLGKSNDFIGGTTLGMNSKGDCLKHWYECLKNKDRRVEQWHTLTNELPGSTYND
SIO_010081: doc2a
subclass of: SO_0000673
so part of: doc2a
location: join(48897..49164,55171..55250,78220..78294,85405..85514,108532..108658,122858..122917,126163..126320,126964..127045,138665..138761,139352..139488)
location: region:48897-139488:1
so has part: feature:48897-49164:1:exon
so has part: feature:55171-55250:1:exon
so has part: feature:78220-78294:1:exon
so has part: feature:85405-85514:1:exon
so has part: feature:108532-108658:1:exon
so has part: feature:122858-122917:1:exon
so has part: feature:126163-126320:1:exon
so has part: feature:126964-127045:1:exon
so has part: feature:138665-138761:1:exon
so has part: feature:139352-139488:1:exon

XP_033854098.1
type: Protein
SIO_000068: ncbiprotein

position:48897:1
position: 48897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139488:1
position: 139488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48897-49164:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55171-55250:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78220-78294:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85405-85514:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108532-108658:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122858-122917:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:126163-126320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:126964-127045:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:138665-138761:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:139352-139488:1:exon

LOC117399055
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117399055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 178246..226726
location: region:178246-226726:1
so has part: feature:178246-226726:1:exon
subclass of: SO_0000010

117399055
type: Gene
SIO_000068: ncbigene

position:178246:1
position: 178246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226726:1
position: 226726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178246-226726:1:exon

LOC117399055
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117399055
product: WD repeat-containing protein 78-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033998205.2
SIO_010081: LOC117399055
subclass of: SO_0000673
so part of: LOC117399055
location: join(178246..178320,191770..191957,193805..193889,194188..194323,194999..195215,211356..211464,212778..212809,213203..213302,213442..213507,225512..225604,226058..226726)
location: region:178246-226726:1
so has part: feature:178246-178320:1:exon
so has part: feature:191770-191957:1:exon
so has part: feature:193805-193889:1:exon
so has part: feature:194188-194323:1:exon
so has part: feature:194999-195215:1:exon
so has part: feature:211356-211464:1:exon
so has part: feature:212778-212809:1:exon
so has part: feature:213203-213302:1:exon
so has part: feature:213442-213507:1:exon
so has part: feature:225512-225604:1:exon
so has part: feature:226058-226726:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:178246-178320:1:exon

position:178320:1
position: 178320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:191770-191957:1:exon

position:191770:1
position: 191770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191957:1
position: 191957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:193805-193889:1:exon

position:193805:1
position: 193805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193889:1
position: 193889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:194188-194323:1:exon

position:194188:1
position: 194188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194323:1
position: 194323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:194999-195215:1:exon

position:194999:1
position: 194999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195215:1
position: 195215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:211356-211464:1:exon

position:211356:1
position: 211356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211464:1
position: 211464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:212778-212809:1:exon

position:212778:1
position: 212778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212809:1
position: 212809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:213203-213302:1:exon

position:213203:1
position: 213203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213302:1
position: 213302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:213442-213507:1:exon

position:213442:1
position: 213442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213507:1
position: 213507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:225512-225604:1:exon

position:225512:1
position: 225512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225604:1
position: 225604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:226058-226726:1:exon

position:226058:1
position: 226058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117399055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117399055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 78-like
translation: MALGLFVTPRRFLISSWAPQFREVPERHALSATPSAPPSLEPRTEGGLSIRDVLDCGCDVMTCCFNDEGTLLAVGLTNGTIQVYQPADSTFLYQLNSSETLQSSLPVTSLRFQHRDNRERHCLLLATYASGCVRVWHVAGGRSLCCVQEGGGDSAGGRGRQTLSLSLSPSGDRFITAGSDCQLHLYDTETRQRIHTCRASHSMSLMDGHRFRVFAVTFHPEKEDEFISGGWDNTVQFWDSKQQHSVRKLSGPHICGDALQIDPSTNQILSGSWRKERALEIWDYNSGEKVTEISDDQDGHSLIYSCHWLGADHMVAGGSESNVCRVIDRNTKLSLGRLVDLPGGVYSTAVCSAGQCEGLIAASSRDCVYLLERTTAPTTHVSDRENYRSQDALLPLREYSSHAALF
SIO_010081: LOC117399055
subclass of: SO_0000673
so part of: LOC117399055
location: join(191797..191957,193805..193889,194188..194323,194999..195215,211356..211464,212778..212809,213203..213302,213442..213507,225512..225604,226058..226279)
location: region:191797-226279:1
so has part: feature:191797-191957:1:exon
so has part: feature:193805-193889:1:exon
so has part: feature:194188-194323:1:exon
so has part: feature:194999-195215:1:exon
so has part: feature:211356-211464:1:exon
so has part: feature:212778-212809:1:exon
so has part: feature:213203-213302:1:exon
so has part: feature:213442-213507:1:exon
so has part: feature:225512-225604:1:exon
so has part: feature:226058-226279:1:exon

XP_033854096.2
type: Protein
SIO_000068: ncbiprotein

position:191797:1
position: 191797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226279:1
position: 226279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191797-191957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193805-193889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194188-194323:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194999-195215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211356-211464:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:212778-212809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213203-213302:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213442-213507:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:225512-225604:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:226058-226279:1:exon

adprh
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: adprh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(229335..247773)
location: region:229335-247773:-1
so has part: feature:229335-247773:-1:exon
subclass of: SO_0000010

117399057
type: Gene
SIO_000068: ncbigene

position:229335:-1
position: 229335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247773:-1
position: 247773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229335-247773:-1:exon

adprh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: adprh
product: ADP-ribosylarginine hydrolase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033998208.2
SIO_010081: adprh
subclass of: SO_0000673
so part of: adprh
location: complement(join(229335..229685,241174..241388,241531..241714,243053..243132,243221..243326,243430..243818,247551..247773))
location: region:229335-247773:-1
so has part: feature:247551-247773:-1:exon
so has part: feature:243430-243818:-1:exon
so has part: feature:243221-243326:-1:exon
so has part: feature:243053-243132:-1:exon
so has part: feature:241531-241714:-1:exon
so has part: feature:241174-241388:-1:exon
so has part: feature:229335-229685:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247551-247773:-1:exon

position:247551:-1
position: 247551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:243430-243818:-1:exon

position:243430:-1
position: 243430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243818:-1
position: 243818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:243221-243326:-1:exon

position:243221:-1
position: 243221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243326:-1
position: 243326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:243053-243132:-1:exon

position:243053:-1
position: 243053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243132:-1
position: 243132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:241531-241714:-1:exon

position:241531:-1
position: 241531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241714:-1
position: 241714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:241174-241388:-1:exon

position:241174:-1
position: 241174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241388:-1
position: 241388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:229335-229685:-1:exon

position:229685:-1
position: 229685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

adprh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: adprh
product: ADP-ribosylarginine hydrolase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033998209.2
SIO_010081: adprh
subclass of: SO_0000673
so part of: adprh
location: complement(join(229336..229685,241174..241388,241531..241714,243053..243132,243221..243326,243430..243528,243604..243818,247551..247773))
location: region:229336-247773:-1
so has part: feature:247551-247773:-1:exon
so has part: feature:243604-243818:-1:exon
so has part: feature:243430-243528:-1:exon
so has part: feature:243221-243326:-1:exon
so has part: feature:243053-243132:-1:exon
so has part: feature:241531-241714:-1:exon
so has part: feature:241174-241388:-1:exon
so has part: feature:229336-229685:-1:exon

position:229336:-1
position: 229336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247551-247773:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243604-243818:-1:exon

position:243604:-1
position: 243604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:243430-243528:-1:exon

position:243528:-1
position: 243528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:243221-243326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:243053-243132:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241531-241714:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241174-241388:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:229336-229685:-1:exon

adprh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: adprh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylarginine hydrolase isoform X2
translation: MTINPSHYRAAMLLSGAGDALGYRNQLWEYNQSGPCIHQELQEMGGLKNIVVQLPDWPVSDDTVLHLATAEALATGKEGEELLQEVALRYVEAMKDMEGRKPGPTSILGTSQLRPGVPGGYRIPFNTEATGCGAAMRAMCIGLRYPRPEELPDLIRVSIETGRMTHNHPTGYLGSFASALFTAFAVQRRPLLSWGAGLVRALPLAMEFVQSAGVDVEENLREWGFFTAKWEWYLSERGLVSGEGLVTWPDPYGPSERDSAYQSFSLSGWAGRSGHDAPMIALDSLLGAGPDWEELCNRAMFHGGDSDSTGVIAGCCWGLLHGFEGVPEGNYRTLEYSSRMEAVAKQLHKLAGWQTCV
SIO_010081: adprh
subclass of: SO_0000673
so part of: adprh
location: complement(join(229522..229685,241174..241388,241531..241714,243053..243132,243221..243326,243430..243528,243604..243818,247551..247561))
location: region:229522-247561:-1
so has part: feature:247551-247561:-1:exon
so has part: feature:243604-243818:-1:exon
so has part: feature:243430-243528:-1:exon
so has part: feature:243221-243326:-1:exon
so has part: feature:243053-243132:-1:exon
so has part: feature:241531-241714:-1:exon
so has part: feature:241174-241388:-1:exon
so has part: feature:229522-229685:-1:exon

XP_033854100.2
type: Protein
SIO_000068: ncbiprotein

position:229522:-1
position: 229522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247561:-1
position: 247561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247551-247561:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243604-243818:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243430-243528:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243221-243326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:243053-243132:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241531-241714:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241174-241388:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:229522-229685:-1:exon

adprh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: adprh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylarginine hydrolase isoform X1
translation: MTINPSHYRAAMLLSGAGDALGYRNQLWEYNQSGPCIHQELQEMGGLKNIVVQLPDWPVSDDTVLHLATAEALATGNLLPSGIFEVSPKLTFYSLFPLPVGKEGEELLQEVALRYVEAMKDMEGRKPGPTSILGTSQLRPGVPGGYRIPFNTEATGCGAAMRAMCIGLRYPRPEELPDLIRVSIETGRMTHNHPTGYLGSFASALFTAFAVQRRPLLSWGAGLVRALPLAMEFVQSAGVDVEENLREWGFFTAKWEWYLSERGLVSGEGLVTWPDPYGPSERDSAYQSFSLSGWAGRSGHDAPMIALDSLLGAGPDWEELCNRAMFHGGDSDSTGVIAGCCWGLLHGFEGVPEGNYRTLEYSSRMEAVAKQLHKLAGWQTCV
SIO_010081: adprh
subclass of: SO_0000673
so part of: adprh
location: complement(join(229522..229685,241174..241388,241531..241714,243053..243132,243221..243326,243430..243818,247551..247561))
location: region:229522-247561:-1
so has part: feature:247551-247561:-1:exon
so has part: feature:243430-243818:-1:exon
so has part: feature:243221-243326:-1:exon
so has part: feature:243053-243132:-1:exon
so has part: feature:241531-241714:-1:exon
so has part: feature:241174-241388:-1:exon
so has part: feature:229522-229685:-1:exon

XP_033854099.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247551-247561:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243430-243818:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243221-243326:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243053-243132:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:241531-241714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241174-241388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:229522-229685:-1:exon

LOC117398984
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398984
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(266312..295137)
location: region:266312-295137:-1
so has part: feature:266312-295137:-1:exon
subclass of: SO_0000010

117398984
type: Gene
SIO_000068: ncbigene

position:266312:-1
position: 266312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295137:-1
position: 295137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266312-295137:-1:exon

LOC117398984
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398984
product: rab GTPase-binding effector protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034914416.1
SIO_010081: LOC117398984
subclass of: SO_0000673
so part of: LOC117398984
location: complement(join(266312..266458,272330..272428,276857..276973,277138..277566,287613..287705,288347..288468,288646..288825,294832..295137))
location: region:266312-295137:-1
so has part: feature:294832-295137:-1:exon
so has part: feature:288646-288825:-1:exon
so has part: feature:288347-288468:-1:exon
so has part: feature:287613-287705:-1:exon
so has part: feature:277138-277566:-1:exon
so has part: feature:276857-276973:-1:exon
so has part: feature:272330-272428:-1:exon
so has part: feature:266312-266458:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294832-295137:-1:exon

position:294832:-1
position: 294832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:288646-288825:-1:exon

position:288646:-1
position: 288646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288825:-1
position: 288825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:288347-288468:-1:exon

position:288347:-1
position: 288347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288468:-1
position: 288468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:287613-287705:-1:exon

position:287613:-1
position: 287613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287705:-1
position: 287705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:277138-277566:-1:exon

position:277138:-1
position: 277138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277566:-1
position: 277566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:276857-276973:-1:exon

position:276857:-1
position: 276857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276973:-1
position: 276973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:272330-272428:-1:exon

position:272330:-1
position: 272330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272428:-1
position: 272428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:266312-266458:-1:exon

position:266458:-1
position: 266458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398984
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398984
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab GTPase-binding effector protein 2
translation: MEATDNDIPELDKTADPSGSSGLVARLQTQLADALLEIENIKAVATISESTKQEAIEEVRQRCQEEVASLHTIMNESISVYESQVASLESECVEKRGGEGRAERERRMSLESEMERAQADSERWREIVQPLEREIRELREQLKRERGQQQYSRPAAGEEEGGERRRGGGRAGAGGCHSRGGEVGEDEEVDYTSDPSLPRSLPPSPPLLFEGGGSEDDTFSCRNGGTGEDPDSFSLGTPCLERRHPQTLTPEQEETASLVSTGTLVPEAIYLAPPGHRLVTDKEWWGLQAQLKQVQISLSQSNQEFERERSEKERLEQELKHSALECAKQVSVLMEQVQNSESLLQTLQKTLSQSQSSVQQQLAELSRAHQRVSVDLHRLSAENHTLKGGGGEGGLPPSAMQVRET
SIO_010081: LOC117398984
subclass of: SO_0000673
so part of: LOC117398984
location: complement(join(266327..266458,272330..272428,276857..276973,277138..277566,287613..287705,288347..288468,288646..288825,294832..294877))
location: region:266327-294877:-1
so has part: feature:294832-294877:-1:exon
so has part: feature:288646-288825:-1:exon
so has part: feature:288347-288468:-1:exon
so has part: feature:287613-287705:-1:exon
so has part: feature:277138-277566:-1:exon
so has part: feature:276857-276973:-1:exon
so has part: feature:272330-272428:-1:exon
so has part: feature:266327-266458:-1:exon

XP_034770307.1
type: Protein
SIO_000068: ncbiprotein

position:266327:-1
position: 266327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294877:-1
position: 294877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294832-294877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288646-288825:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288347-288468:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:287613-287705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277138-277566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276857-276973:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:272330-272428:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:266327-266458:-1:exon

asphd1
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: asphd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 295828..307249
location: region:295828-307249:1
so has part: feature:295828-307249:1:exon
subclass of: SO_0000010

117399060
type: Gene
SIO_000068: ncbigene

position:295828:1
position: 295828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307249:1
position: 307249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295828-307249:1:exon

asphd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: asphd1
product: aspartate beta-hydroxylase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914417.1
SIO_010081: asphd1
subclass of: SO_0000673
so part of: asphd1
location: join(295828..295920,296786..297321,299531..299746,300417..300624,302109..302222,307224..307249)
location: region:295828-307249:1
so has part: feature:295828-295920:1:exon
so has part: feature:296786-297321:1:exon
so has part: feature:299531-299746:1:exon
so has part: feature:300417-300624:1:exon
so has part: feature:302109-302222:1:exon
so has part: feature:307224-307249:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295828-295920:1:exon

position:295920:1
position: 295920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:296786-297321:1:exon

position:296786:1
position: 296786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297321:1
position: 297321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:299531-299746:1:exon

position:299531:1
position: 299531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299746:1
position: 299746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:300417-300624:1:exon

position:300417:1
position: 300417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300624:1
position: 300624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:302109-302222:1:exon

position:302109:1
position: 302109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302222:1
position: 302222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:307224-307249:1:exon

position:307224:1
position: 307224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

asphd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: asphd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aspartate beta-hydroxylase domain-containing protein 2
translation: MQWDLQSVVSFLLSRTPTPELGTQPLVVLLAALLILFLWYCYRVGTEDQDSENGGGGAARRGRRRIGTMRGLSIPGSAAGLDHSDLGIIPIGGPEHGGYFAPILTSPPFPNPGQASPGNRKLYRNLQEYAKRYSWAGMGRIHKGVREQARYLSDRLTVQKPKVFFLPDLPSTPYFPRDAQRHDIEVLEASFPAILGEFEAVYLRGVEGKLGWSCGGAQPKGFSSFPLFSRGSWSPQNCRACPRTYRALSSLRTFSNGNVFGNAEFSVLQPGASLPGECGPCNARLRCHLGLKIPAGCELVVGGEPQCWSEGYCLLVDDSFLHTTAHNECPACLFF
SIO_010081: asphd1
subclass of: SO_0000673
so part of: asphd1
location: join(296878..297321,299531..299746,300417..300624,302109..302222,307224..307249)
location: region:296878-307249:1
so has part: feature:296878-297321:1:exon
so has part: feature:299531-299746:1:exon
so has part: feature:300417-300624:1:exon
so has part: feature:302109-302222:1:exon
so has part: feature:307224-307249:1:exon

XP_034770308.1
type: Protein
SIO_000068: ncbiprotein

position:296878:1
position: 296878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296878-297321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:299531-299746:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:300417-300624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:302109-302222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307224-307249:1:exon

LOC117399047
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117399047
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(307831..348574)
location: region:307831-348574:-1
so has part: feature:307831-348574:-1:exon
subclass of: SO_0000010

117399047
type: Gene
SIO_000068: ncbigene

position:307831:-1
position: 307831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348574:-1
position: 348574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307831-348574:-1:exon

LOC117399047
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117399047
product: sarcoplasmic/endoplasmic reticulum calcium ATPase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 79 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034914498.1
SIO_010081: LOC117399047
subclass of: SO_0000673
so part of: LOC117399047
location: complement(join(307831..307961,308617..308820,309728..309948,310130..310353,311669..311780,312209..312427,312616..312741,312979..313110,315289..315391,315827..315915,319503..319669,319967..320264,331943..332109,332364..332502,333756..333860,337194..337276,338294..338311,348353..348574))
location: region:307831-348574:-1
so has part: feature:348353-348574:-1:exon
so has part: feature:338294-338311:-1:exon
so has part: feature:337194-337276:-1:exon
so has part: feature:333756-333860:-1:exon
so has part: feature:332364-332502:-1:exon
so has part: feature:331943-332109:-1:exon
so has part: feature:319967-320264:-1:exon
so has part: feature:319503-319669:-1:exon
so has part: feature:315827-315915:-1:exon
so has part: feature:315289-315391:-1:exon
so has part: feature:312979-313110:-1:exon
so has part: feature:312616-312741:-1:exon
so has part: feature:312209-312427:-1:exon
so has part: feature:311669-311780:-1:exon
so has part: feature:310130-310353:-1:exon
so has part: feature:309728-309948:-1:exon
so has part: feature:308617-308820:-1:exon
so has part: feature:307831-307961:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:348353-348574:-1:exon

position:348353:-1
position: 348353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:338294-338311:-1:exon

position:338294:-1
position: 338294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338311:-1
position: 338311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:337194-337276:-1:exon

position:337194:-1
position: 337194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337276:-1
position: 337276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:333756-333860:-1:exon

position:333756:-1
position: 333756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333860:-1
position: 333860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:332364-332502:-1:exon

position:332364:-1
position: 332364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332502:-1
position: 332502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:331943-332109:-1:exon

position:331943:-1
position: 331943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332109:-1
position: 332109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:319967-320264:-1:exon

position:319967:-1
position: 319967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320264:-1
position: 320264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:319503-319669:-1:exon

position:319503:-1
position: 319503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319669:-1
position: 319669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:315827-315915:-1:exon

position:315827:-1
position: 315827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315915:-1
position: 315915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:315289-315391:-1:exon

position:315289:-1
position: 315289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315391:-1
position: 315391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:312979-313110:-1:exon

position:312979:-1
position: 312979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313110:-1
position: 313110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:312616-312741:-1:exon

position:312616:-1
position: 312616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312741:-1
position: 312741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:312209-312427:-1:exon

position:312209:-1
position: 312209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312427:-1
position: 312427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:311669-311780:-1:exon

position:311669:-1
position: 311669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311780:-1
position: 311780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:310130-310353:-1:exon

position:310130:-1
position: 310130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310353:-1
position: 310353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:309728-309948:-1:exon

position:309728:-1
position: 309728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309948:-1
position: 309948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:308617-308820:-1:exon

position:308617:-1
position: 308617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308820:-1
position: 308820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:307831-307961:-1:exon

position:307961:-1
position: 307961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117399047
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117399047
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sarcoplasmic/endoplasmic reticulum calcium ATPase 1
translation: MDNGHSKTVEECLAYFGVNEKAGLTTEQVKKNMEKYGPNELPAEEGKTIWELVVEQFEDLLVRILLLAACISFVLALFEEGEETVTAFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEIGKVYRTDRKSVQRIKAREIVPGDIVEVAVGDKVPADIRLTSIISTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKALGVAVSTGVSTEIGKIRDQMAATEQEKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFTLDKVEGDVCSLNEFNISGSKYTPEGDVTKNDKQIQSGQYDGLVELATICALCNDSSLDYNESKGIYEKVGEATETALCCLVEKMNVFNTDVRSLSKVERANACCSVIKQLMKKEFTLEFSRDRKSMSVYCTPAKASRAAVGSKLFVKGAPEGVIDRCAYVRVGTTRVPLTTPVKDKIMTVIKEWGTGRDTLRCLALATRDSPLKKEEMNLEDSTKFVEYECDLTFVGCVGMLDPPRKEVTGSIQLCRAAGIRVIMITGDNKGTAVAICRRIGIFGEDEEVTGRAYTGREFDDLPPAEQREAVKRACCYARVEPSHKSKIVEFLQSFDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMGKPPRSAKEPLISGWLFFRYLAIGAYVGAATVGAAAWWFMYAEEGPEVSYYQLVRKLR
SIO_010081: LOC117399047
subclass of: SO_0000673
so part of: LOC117399047
location: complement(join(307858..307961,308617..308820,309728..309948,310130..310353,311669..311780,312209..312427,312616..312741,312979..313110,315289..315391,315827..315915,319503..319669,319967..320264,331943..332109,332364..332502,333756..333860,337194..337276,338294..338311,348353..348470))
location: region:307858-348470:-1
so has part: feature:348353-348470:-1:exon
so has part: feature:338294-338311:-1:exon
so has part: feature:337194-337276:-1:exon
so has part: feature:333756-333860:-1:exon
so has part: feature:332364-332502:-1:exon
so has part: feature:331943-332109:-1:exon
so has part: feature:319967-320264:-1:exon
so has part: feature:319503-319669:-1:exon
so has part: feature:315827-315915:-1:exon
so has part: feature:315289-315391:-1:exon
so has part: feature:312979-313110:-1:exon
so has part: feature:312616-312741:-1:exon
so has part: feature:312209-312427:-1:exon
so has part: feature:311669-311780:-1:exon
so has part: feature:310130-310353:-1:exon
so has part: feature:309728-309948:-1:exon
so has part: feature:308617-308820:-1:exon
so has part: feature:307858-307961:-1:exon

XP_034770389.1
type: Protein
SIO_000068: ncbiprotein

position:307858:-1
position: 307858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348470:-1
position: 348470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348353-348470:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:338294-338311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337194-337276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333756-333860:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332364-332502:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:331943-332109:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319967-320264:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319503-319669:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315827-315915:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315289-315391:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:312979-313110:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:312616-312741:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:312209-312427:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:311669-311780:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:310130-310353:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:309728-309948:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:308617-308820:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:307858-307961:-1:exon

LOC117967151
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117967151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 368426..371224
location: region:368426-371224:1
so has part: feature:368426-371224:1:exon
subclass of: SO_0000011

117967151
type: Gene
SIO_000068: ncbigene

position:368426:1
position: 368426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371224:1
position: 371224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368426-371224:1:exon

LOC117967151
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117967151
product: uncharacterized LOC117967151
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004661883.1
SIO_010081: LOC117967151
subclass of: SO_0000673
so part of: LOC117967151
location: join(368426..369417,370208..370337,371117..371224)
location: region:368426-371224:1
so has part: feature:368426-369417:1:exon
so has part: feature:370208-370337:1:exon
so has part: feature:371117-371224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368426-369417:1:exon

position:369417:1
position: 369417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370208-370337:1:exon

position:370208:1
position: 370208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370337:1
position: 370337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:371117-371224:1:exon

position:371117:1
position: 371117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117967174
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117967174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 399403..400972
location: region:399403-400972:1
so has part: feature:399403-400972:1:exon
subclass of: SO_0000011

117967174
type: Gene
SIO_000068: ncbigene

position:399403:1
position: 399403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400972:1
position: 400972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399403-400972:1:exon

LOC117967174
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117967174
product: uncharacterized LOC117967174
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004661884.1
SIO_010081: LOC117967174
subclass of: SO_0000673
so part of: LOC117967174
location: join(399403..399457,399675..400972)
location: region:399403-400972:1
so has part: feature:399403-399457:1:exon
so has part: feature:399675-400972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:399403-399457:1:exon

position:399457:1
position: 399457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:399675-400972:1:exon

position:399675:1
position: 399675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117399050
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117399050
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 417608..425318
location: region:417608-425318:1
so has part: feature:417608-425318:1:exon
subclass of: SO_0000010

117399050
type: Gene
SIO_000068: ncbigene

position:417608:1
position: 417608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425318:1
position: 425318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417608-425318:1:exon

LOC117399050
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117399050
product: tectonic-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034914330.1
SIO_010081: LOC117399050
subclass of: SO_0000673
so part of: LOC117399050
location: join(417608..417782,423683..423823,424045..425318)
location: region:417608-425318:1
so has part: feature:417608-417782:1:exon
so has part: feature:423683-423823:1:exon
so has part: feature:424045-425318:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:417608-417782:1:exon

position:417782:1
position: 417782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:423683-423823:1:exon

position:423683:1
position: 423683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423823:1
position: 423823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:424045-425318:1:exon

position:424045:1
position: 424045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117399050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117399050
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tectonic-3-like
translation: MVRNARPEEDSDWTRVIQEDCPAPDQAAESCVSGCLVPISLSFRFLWAQRGLLTHPQGQILGAKSSMRCTLLQCTARPVTLTAAVSFVDTTVYPESPRGQPKPDWKLPFDFFYPIRAAVSRADRQGAAWSCLCITIVTSLNLLWN
SIO_010081: LOC117399050
subclass of: SO_0000673
so part of: LOC117399050
location: join(417705..417782,423683..423823,424045..424263)
location: region:417705-424263:1
so has part: feature:417705-417782:1:exon
so has part: feature:423683-423823:1:exon
so has part: feature:424045-424263:1:exon

XP_034770221.1
type: Protein
SIO_000068: ncbiprotein

position:417705:1
position: 417705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424263:1
position: 424263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417705-417782:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423683-423823:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424045-424263:1:exon

tufm
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: tufm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(424978..438850)
location: region:424978-438850:-1
so has part: feature:424978-438850:-1:exon
subclass of: SO_0000010

117399052
type: Gene
SIO_000068: ncbigene

position:424978:-1
position: 424978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438850:-1
position: 438850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424978-438850:-1:exon

tufm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: tufm
product: Tu translation elongation factor, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033998203.2
SIO_010081: tufm
subclass of: SO_0000673
so part of: tufm
location: complement(join(424978..425793,430360..430479,432166..432317,433055..433159,433266..433398,433494..433763,433891..433964,434006..434098,435749..435908,437806..437852,438798..438850))
location: region:424978-438850:-1
so has part: feature:438798-438850:-1:exon
so has part: feature:437806-437852:-1:exon
so has part: feature:435749-435908:-1:exon
so has part: feature:434006-434098:-1:exon
so has part: feature:433891-433964:-1:exon
so has part: feature:433494-433763:-1:exon
so has part: feature:433266-433398:-1:exon
so has part: feature:433055-433159:-1:exon
so has part: feature:432166-432317:-1:exon
so has part: feature:430360-430479:-1:exon
so has part: feature:424978-425793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:438798-438850:-1:exon

position:438798:-1
position: 438798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:437806-437852:-1:exon

position:437806:-1
position: 437806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437852:-1
position: 437852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:435749-435908:-1:exon

position:435749:-1
position: 435749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435908:-1
position: 435908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:434006-434098:-1:exon

position:434006:-1
position: 434006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434098:-1
position: 434098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:433891-433964:-1:exon

position:433891:-1
position: 433891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433964:-1
position: 433964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:433494-433763:-1:exon

position:433494:-1
position: 433494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433763:-1
position: 433763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:433266-433398:-1:exon

position:433266:-1
position: 433266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433398:-1
position: 433398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:433055-433159:-1:exon

position:433055:-1
position: 433055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433159:-1
position: 433159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:432166-432317:-1:exon

position:432166:-1
position: 432166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432317:-1
position: 432317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:430360-430479:-1:exon

position:430360:-1
position: 430360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430479:-1
position: 430479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:424978-425793:-1:exon

position:425793:-1
position: 425793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tufm
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: tufm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongation factor Tu, mitochondrial
translation: MAAFVVARACASDALRSSVAGLLRSSFRPAVLPSGLCAAPVLVRRYAVEAKKTFARDKPHVNIGTIGHVDHGKTTLTAAITKVLAEAGGARYKKYEDIDNAPEEKALDKEVRTSHVEYSTANRHYAHTDCPGHADYVKNMITGTAQLDGCILVVAATDGQMPQTREHLLLARQIGVEHVVVFVNKADAVDDKEMLELVELEIRELLSEFGYEGEKTPVIVGSALCALENRSPEIGVDSIMKLLEVVDNYVPLPKRELDKPFLLPIEAVYSIPGRGTVVTGTLERGVIKKGDDCEFVGHNRAFKSVVTGIEMFHQHLDRAEAGDNLGALVRGLKREDMRRGMVMSKPGSIKPHQKVQAQVYVLSKEEGGRHKPFVSNFMPVMFSLTWDMACRVELPQSKEMVMPGEDTSLTLTLRQPMVLEKGQRFTLRDGNKTIGTGLVTDILTATQEDQINWG
SIO_010081: tufm
subclass of: SO_0000673
so part of: tufm
location: complement(join(425623..425793,430360..430479,432166..432317,433055..433159,433266..433398,433494..433763,433891..433964,434006..434098,435749..435908,437806..437852,438798..438837))
location: region:425623-438837:-1
so has part: feature:438798-438837:-1:exon
so has part: feature:437806-437852:-1:exon
so has part: feature:435749-435908:-1:exon
so has part: feature:434006-434098:-1:exon
so has part: feature:433891-433964:-1:exon
so has part: feature:433494-433763:-1:exon
so has part: feature:433266-433398:-1:exon
so has part: feature:433055-433159:-1:exon
so has part: feature:432166-432317:-1:exon
so has part: feature:430360-430479:-1:exon
so has part: feature:425623-425793:-1:exon

XP_033854094.2
type: Protein
SIO_000068: ncbiprotein

position:425623:-1
position: 425623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438837:-1
position: 438837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438798-438837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437806-437852:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435749-435908:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434006-434098:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433891-433964:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433494-433763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:433266-433398:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:433055-433159:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:432166-432317:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:430360-430479:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:425623-425793:-1:exon

LOC117399080
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117399080
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 442931..458389
location: region:442931-458389:1
so has part: feature:442931-458389:1:exon
subclass of: SO_0000010

117399080
type: Gene
SIO_000068: ncbigene

position:442931:1
position: 442931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458389:1
position: 458389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442931-458389:1:exon

LOC117399080
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117399080
product: serine/threonine-protein phosphatase alpha-2 isoform-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034914555.1
SIO_010081: LOC117399080
subclass of: SO_0000673
so part of: LOC117399080
location: join(442931..443158,446020..446151,446521..446751,446873..446977,447085..447308,447432..447566,455421..456995,457033..458389)
location: region:442931-458389:1
so has part: feature:442931-443158:1:exon
so has part: feature:446020-446151:1:exon
so has part: feature:446521-446751:1:exon
so has part: feature:446873-446977:1:exon
so has part: feature:447085-447308:1:exon
so has part: feature:447432-447566:1:exon
so has part: feature:455421-456995:1:exon
so has part: feature:457033-458389:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:442931-443158:1:exon

position:443158:1
position: 443158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:446020-446151:1:exon

position:446020:1
position: 446020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446151:1
position: 446151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:446521-446751:1:exon

position:446521:1
position: 446521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446751:1
position: 446751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:446873-446977:1:exon

position:446873:1
position: 446873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446977:1
position: 446977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:447085-447308:1:exon

position:447085:1
position: 447085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447308:1
position: 447308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:447432-447566:1:exon

position:447432:1
position: 447432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447566:1
position: 447566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:455421-456995:1:exon

position:455421:1
position: 455421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456995:1
position: 456995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:457033-458389:1:exon

position:457033:1
position: 457033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117399080
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117399080
product: serine/threonine-protein phosphatase alpha-2 isoform-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034914556.1
SIO_010081: LOC117399080
subclass of: SO_0000673
so part of: LOC117399080
location: join(442931..443158,446020..446151,446521..446751,446873..446977,447085..447308,447432..447566,455421..456995,457093..458389)
location: region:442931-458389:1
so has part: feature:442931-443158:1:exon
so has part: feature:446020-446151:1:exon
so has part: feature:446521-446751:1:exon
so has part: feature:446873-446977:1:exon
so has part: feature:447085-447308:1:exon
so has part: feature:447432-447566:1:exon
so has part: feature:455421-456995:1:exon
so has part: feature:457093-458389:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:442931-443158:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:446020-446151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:446521-446751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446873-446977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447085-447308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447432-447566:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455421-456995:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:457093-458389:1:exon

position:457093:1
position: 457093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117399080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117399080
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase alpha-2 isoform-like
translation: MAEPDKLNIDSIIQRLLEVKGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDVHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQVRRVMRPTDVPDQGLLCDLLWADPDKDVLGWGENDRGVSFTFGADVVAKFLHKHDMDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKLFSYGGGGVGSGRPVTPPRNSAKSKPKK
SIO_010081: LOC117399080
subclass of: SO_0000673
so part of: LOC117399080
location: join(443104..443158,446020..446151,446521..446751,446873..446977,447085..447308,447432..447566,455421..455531)
location: region:443104-455531:1
so has part: feature:443104-443158:1:exon
so has part: feature:446020-446151:1:exon
so has part: feature:446521-446751:1:exon
so has part: feature:446873-446977:1:exon
so has part: feature:447085-447308:1:exon
so has part: feature:447432-447566:1:exon
so has part: feature:455421-455531:1:exon

XP_034770446.1
type: Protein
SIO_000068: ncbiprotein

position:443104:1
position: 443104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455531:1
position: 455531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443104-443158:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:446020-446151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:446521-446751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446873-446977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447085-447308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447432-447566:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455421-455531:1:exon

LOC117399080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117399080
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase alpha-2 isoform-like
translation: MAEPDKLNIDSIIQRLLEVKGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDVHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQVRRVMRPTDVPDQGLLCDLLWADPDKDVLGWGENDRGVSFTFGADVVAKFLHKHDMDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKLFSYGGGGVGSGRPVTPPRNSAKSKPKK
SIO_010081: LOC117399080
subclass of: SO_0000673
so part of: LOC117399080
location: join(443104..443158,446020..446151,446521..446751,446873..446977,447085..447308,447432..447566,455421..455531)
location: region:443104-455531:1
so has part: feature:443104-443158:1:exon
so has part: feature:446020-446151:1:exon
so has part: feature:446521-446751:1:exon
so has part: feature:446873-446977:1:exon
so has part: feature:447085-447308:1:exon
so has part: feature:447432-447566:1:exon
so has part: feature:455421-455531:1:exon

XP_034770447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443104-443158:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:446020-446151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:446521-446751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446873-446977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447085-447308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447432-447566:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455421-455531:1:exon

mto1
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: mto1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(459947..507770)
location: region:459947-507770:-1
so has part: feature:459947-507770:-1:exon
subclass of: SO_0000010

117399079
type: Gene
SIO_000068: ncbigene

position:459947:-1
position: 459947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507770:-1
position: 507770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459947-507770:-1:exon

mto1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: mto1
product: mitochondrial tRNA translation optimization 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034914554.1
SIO_010081: mto1
subclass of: SO_0000673
so part of: mto1
location: complement(join(459947..460113,471703..471860,474892..475001,475166..475337,483773..483977,484418..484548,484668..484858,485196..485308,489899..490188,490581..490698,501984..502183,502708..502917,506819..506874,507552..507770))
location: region:459947-507770:-1
so has part: feature:507552-507770:-1:exon
so has part: feature:506819-506874:-1:exon
so has part: feature:502708-502917:-1:exon
so has part: feature:501984-502183:-1:exon
so has part: feature:490581-490698:-1:exon
so has part: feature:489899-490188:-1:exon
so has part: feature:485196-485308:-1:exon
so has part: feature:484668-484858:-1:exon
so has part: feature:484418-484548:-1:exon
so has part: feature:483773-483977:-1:exon
so has part: feature:475166-475337:-1:exon
so has part: feature:474892-475001:-1:exon
so has part: feature:471703-471860:-1:exon
so has part: feature:459947-460113:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:507552-507770:-1:exon

position:507552:-1
position: 507552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:506819-506874:-1:exon

position:506819:-1
position: 506819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506874:-1
position: 506874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:502708-502917:-1:exon

position:502708:-1
position: 502708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502917:-1
position: 502917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:501984-502183:-1:exon

position:501984:-1
position: 501984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502183:-1
position: 502183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:490581-490698:-1:exon

position:490581:-1
position: 490581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490698:-1
position: 490698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:489899-490188:-1:exon

position:489899:-1
position: 489899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490188:-1
position: 490188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:485196-485308:-1:exon

position:485196:-1
position: 485196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485308:-1
position: 485308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:484668-484858:-1:exon

position:484668:-1
position: 484668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484858:-1
position: 484858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:484418-484548:-1:exon

position:484418:-1
position: 484418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484548:-1
position: 484548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:483773-483977:-1:exon

position:483773:-1
position: 483773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483977:-1
position: 483977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:475166-475337:-1:exon

position:475166:-1
position: 475166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475337:-1
position: 475337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:474892-475001:-1:exon

position:474892:-1
position: 474892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475001:-1
position: 475001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:471703-471860:-1:exon

position:471703:-1
position: 471703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471860:-1
position: 471860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:459947-460113:-1:exon

position:460113:-1
position: 460113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mto1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: mto1
product: mitochondrial tRNA translation optimization 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033998246.2
SIO_010081: mto1
subclass of: SO_0000673
so part of: mto1
location: complement(join(459947..460113,471703..471860,474892..475001,475166..475337,483773..483977,484418..484548,484668..484858,485196..485308,489899..490188,490581..490698,501984..502183,502708..502906,506818..506874,507552..507770))
location: region:459947-507770:-1
so has part: feature:507552-507770:-1:exon
so has part: feature:506818-506874:-1:exon
so has part: feature:502708-502906:-1:exon
so has part: feature:501984-502183:-1:exon
so has part: feature:490581-490698:-1:exon
so has part: feature:489899-490188:-1:exon
so has part: feature:485196-485308:-1:exon
so has part: feature:484668-484858:-1:exon
so has part: feature:484418-484548:-1:exon
so has part: feature:483773-483977:-1:exon
so has part: feature:475166-475337:-1:exon
so has part: feature:474892-475001:-1:exon
so has part: feature:471703-471860:-1:exon
so has part: feature:459947-460113:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:507552-507770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506818-506874:-1:exon

position:506818:-1
position: 506818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:502708-502906:-1:exon

position:502906:-1
position: 502906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:501984-502183:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:490581-490698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:489899-490188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:485196-485308:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:484668-484858:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:484418-484548:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:483773-483977:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:475166-475337:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:474892-475001:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:471703-471860:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459947-460113:-1:exon

mto1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: mto1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MTO1 homolog, mitochondrial
translation: MLPQRFCQRWGRNFLSAPSRWAGSDLGARSYDVIVVGGGHAGTEAAAAATRVGAETLLITQRISTIGALSCNPSFGGVGKGHLLRELDALDGLAARLSDRAGVHFKVLNRSKGPAVWGLRAQVDRDQYRQYMQSEILSTPGLMVQEGSVEDLIVQEPDPAKPGIARVRGVRLGDGGTVHCKALILTTGTFLSGSLGWGTVSTPGGRLGEPPSLGLSCSLSDLGFRKGRLKTGTPPRIRRESVEFSRMERHEGDPKPVPFSFLNQRVSIKPEDQLPCFLTHTGPGVERIIRETLHLNQHVLETSKGPRYCPSIESKVLRFPGRAHQVWLEPEGLNSDLMYPQGLSMTLPAELQRDLIREIPGLERAEIHAPGYGVQYDFLDPRQLHPSLETHRVQGLFLAGQINGTTGYEEAAAQGIVAGINASLSSLSLPRFTLSRTECYLGVLIDDLTSLGVTEPYRMFTSRAEFRTTLRPDNADLRLTEKGFSEARCVSPQRFSQFQSVSIRLHEALSVLRSVRLSAYRWRCELPHAPISKERSGLISAFELLQYQGVTMETLSSIFPQSLATFLDLADRLKIEALYLPHSVLQKEEMALVRREESLRLPPGLHYPSLPISLSNEAREALQESQPQTLGAAGRLPGVTPAAIVNLLRYVRDHAEQGNEMERERTDFAS
SIO_010081: mto1
subclass of: SO_0000673
so part of: mto1
location: complement(join(459988..460113,471703..471860,474892..475001,475166..475337,483773..483977,484418..484548,484668..484858,485196..485308,489899..490188,490581..490698,501984..502183,502708..502906))
location: region:459988-502906:-1
so has part: feature:502708-502906:-1:exon
so has part: feature:501984-502183:-1:exon
so has part: feature:490581-490698:-1:exon
so has part: feature:489899-490188:-1:exon
so has part: feature:485196-485308:-1:exon
so has part: feature:484668-484858:-1:exon
so has part: feature:484418-484548:-1:exon
so has part: feature:483773-483977:-1:exon
so has part: feature:475166-475337:-1:exon
so has part: feature:474892-475001:-1:exon
so has part: feature:471703-471860:-1:exon
so has part: feature:459988-460113:-1:exon

XP_034770445.1
type: Protein
SIO_000068: ncbiprotein

position:459988:-1
position: 459988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502708-502906:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:501984-502183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490581-490698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489899-490188:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485196-485308:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:484668-484858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:484418-484548:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:483773-483977:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:475166-475337:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:474892-475001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:471703-471860:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:459988-460113:-1:exon

mto1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: mto1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MTO1 homolog, mitochondrial
translation: MLPQRFCQRWGRNFLSAPSRWAGSDLGARSYDVIVVGGGHAGTEAAAAATRVGAETLLITQRISTIGALSCNPSFGGVGKGHLLRELDALDGLAARLSDRAGVHFKVLNRSKGPAVWGLRAQVDRDQYRQYMQSEILSTPGLMVQEGSVEDLIVQEPDPAKPGIARVRGVRLGDGGTVHCKALILTTGTFLSGSLGWGTVSTPGGRLGEPPSLGLSCSLSDLGFRKGRLKTGTPPRIRRESVEFSRMERHEGDPKPVPFSFLNQRVSIKPEDQLPCFLTHTGPGVERIIRETLHLNQHVLETSKGPRYCPSIESKVLRFPGRAHQVWLEPEGLNSDLMYPQGLSMTLPAELQRDLIREIPGLERAEIHAPGYGVQYDFLDPRQLHPSLETHRVQGLFLAGQINGTTGYEEAAAQGIVAGINASLSSLSLPRFTLSRTECYLGVLIDDLTSLGVTEPYRMFTSRAEFRTTLRPDNADLRLTEKGFSEARCVSPQRFSQFQSVSIRLHEALSVLRSVRLSAYRWRCELPHAPISKERSGLISAFELLQYQGVTMETLSSIFPQSLATFLDLADRLKIEALYLPHSVLQKEEMALVRREESLRLPPGLHYPSLPISLSNEAREALQESQPQTLGAAGRLPGVTPAAIVNLLRYVRDHAEQGNEMERERTDFAS
SIO_010081: mto1
subclass of: SO_0000673
so part of: mto1
location: complement(join(459988..460113,471703..471860,474892..475001,475166..475337,483773..483977,484418..484548,484668..484858,485196..485308,489899..490188,490581..490698,501984..502183,502708..502906))
location: region:459988-502906:-1
so has part: feature:502708-502906:-1:exon
so has part: feature:501984-502183:-1:exon
so has part: feature:490581-490698:-1:exon
so has part: feature:489899-490188:-1:exon
so has part: feature:485196-485308:-1:exon
so has part: feature:484668-484858:-1:exon
so has part: feature:484418-484548:-1:exon
so has part: feature:483773-483977:-1:exon
so has part: feature:475166-475337:-1:exon
so has part: feature:474892-475001:-1:exon
so has part: feature:471703-471860:-1:exon
so has part: feature:459988-460113:-1:exon

XP_033854137.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502708-502906:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:501984-502183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490581-490698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489899-490188:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485196-485308:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:484668-484858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:484418-484548:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:483773-483977:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:475166-475337:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:474892-475001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:471703-471860:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:459988-460113:-1:exon

sh2b1
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: sh2b1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(523111..545040)
location: region:523111-545040:-1
so has part: feature:523111-545040:-1:exon
subclass of: SO_0000010

117399073
type: Gene
SIO_000068: ncbigene

position:523111:-1
position: 523111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545040:-1
position: 545040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523111-545040:-1:exon

sh2b1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: sh2b1
product: SH2B adaptor protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033998238.2
SIO_010081: sh2b1
subclass of: SO_0000673
so part of: sh2b1
location: complement(join(523111..523461,524621..524792,532350..532555,532745..532894,532998..533098,535669..535760,540714..540815,541267..542833,544682..545040))
location: region:523111-545040:-1
so has part: feature:544682-545040:-1:exon
so has part: feature:541267-542833:-1:exon
so has part: feature:540714-540815:-1:exon
so has part: feature:535669-535760:-1:exon
so has part: feature:532998-533098:-1:exon
so has part: feature:532745-532894:-1:exon
so has part: feature:532350-532555:-1:exon
so has part: feature:524621-524792:-1:exon
so has part: feature:523111-523461:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544682-545040:-1:exon

position:544682:-1
position: 544682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:541267-542833:-1:exon

position:541267:-1
position: 541267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542833:-1
position: 542833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:540714-540815:-1:exon

position:540714:-1
position: 540714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540815:-1
position: 540815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:535669-535760:-1:exon

position:535669:-1
position: 535669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535760:-1
position: 535760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:532998-533098:-1:exon

position:532998:-1
position: 532998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533098:-1
position: 533098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:532745-532894:-1:exon

position:532745:-1
position: 532745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532894:-1
position: 532894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:532350-532555:-1:exon

position:532350:-1
position: 532350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532555:-1
position: 532555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:524621-524792:-1:exon

position:524621:-1
position: 524621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524792:-1
position: 524792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:523111-523461:-1:exon

position:523461:-1
position: 523461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sh2b1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: sh2b1
product: SH2B adaptor protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034914499.1
SIO_010081: sh2b1
subclass of: SO_0000673
so part of: sh2b1
location: complement(join(523111..523461,524621..524792,532350..532555,532745..532894,532998..533098,535669..535760,540714..540815,541267..542833,544668..545040))
location: region:523111-545040:-1
so has part: feature:544668-545040:-1:exon
so has part: feature:541267-542833:-1:exon
so has part: feature:540714-540815:-1:exon
so has part: feature:535669-535760:-1:exon
so has part: feature:532998-533098:-1:exon
so has part: feature:532745-532894:-1:exon
so has part: feature:532350-532555:-1:exon
so has part: feature:524621-524792:-1:exon
so has part: feature:523111-523461:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544668-545040:-1:exon

position:544668:-1
position: 544668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:541267-542833:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540714-540815:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:535669-535760:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:532998-533098:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:532745-532894:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:532350-532555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:524621-524792:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:523111-523461:-1:exon

sh2b1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: sh2b1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2B adapter protein 1 isoform X1
translation: MNGTVLPSAPSGDGDLHPSGCCPPLPPGPSPLPDSPPPPPPPSWKEFCEIHAHAAAMEFACRFRLYLEDHPQYLSLPGGAGATFSRRFAERFVRHFESQVGGGAGGVANCLDSVSVETYCSNEEDSSSLTSPQQPTGGGRPLLSQGEPELDIIPLAQTPLPLPLPHPLHLPVQPISISSQSRSSEDISFSSISSFNNAAVSLAPRSGPGSATAPYQLGAASLGPSGSQQAGTAASLNVNLNMNTGNSGSARSTASPNPGKPKLRKRFSLRSVSRSVRGSVRGILHWKSTGSEASSPVSVEEREGLGGGLSSSYSYSGSVEEARGKGRGLHGQGAAGGLPPSLSLPLSAPSLPPSSSSSSSSFSSEQRERRKSAGNSGGGGNSDREKEKWTHRFERLRLSRSPPLPKPPPSDVRREGLLSFMVAEELLSGHTGGSGPGLTASMGGGASGSKARWQKCRLILRRDGRAGAASPTTPGPQSCLLEFFVPPKASKPRVTISCSSIVDVRTTTPLEMPDKENTFVLKMQGSVEYILETADSLQMRSWLADIQECISHSEHDDSLDTPCLSESLPSRELPITPGETNDPLTQGGYGGLGGPNSEMHPPELPPRAPLDESEGRLQGGGGANAVTPFSETPDGTGSFLFSEPPELLDHPLSDCPWFHGTLSRLKAAQLVLAGGTGSHGVFLVRQSETRRGEYVLTFNFQGKAKHLRLSLNEEGQCRVQHLWFQSIFDMLEHFRVHPIPLESGGASDVTLISFVVSANRQHDLTSRCHSPASLPLPPPPIPPPPPARPPPPSPPQEREREREGEREREHERERERERGSEGEGEECEEREGERGVTLRQLEAPPSESEERESVRTRAVDNQYSFF
SIO_010081: sh2b1
subclass of: SO_0000673
so part of: sh2b1
location: complement(join(523148..523461,524621..524792,532350..532555,532745..532894,532998..533098,535669..535760,540714..540815,541267..542730))
location: region:523148-542730:-1
so has part: feature:541267-542730:-1:exon
so has part: feature:540714-540815:-1:exon
so has part: feature:535669-535760:-1:exon
so has part: feature:532998-533098:-1:exon
so has part: feature:532745-532894:-1:exon
so has part: feature:532350-532555:-1:exon
so has part: feature:524621-524792:-1:exon
so has part: feature:523148-523461:-1:exon

XP_033854129.2
type: Protein
SIO_000068: ncbiprotein

position:523148:-1
position: 523148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542730:-1
position: 542730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541267-542730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540714-540815:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535669-535760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532998-533098:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:532745-532894:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:532350-532555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524621-524792:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:523148-523461:-1:exon

sh2b1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: sh2b1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2B adapter protein 1 isoform X1
translation: MNGTVLPSAPSGDGDLHPSGCCPPLPPGPSPLPDSPPPPPPPSWKEFCEIHAHAAAMEFACRFRLYLEDHPQYLSLPGGAGATFSRRFAERFVRHFESQVGGGAGGVANCLDSVSVETYCSNEEDSSSLTSPQQPTGGGRPLLSQGEPELDIIPLAQTPLPLPLPHPLHLPVQPISISSQSRSSEDISFSSISSFNNAAVSLAPRSGPGSATAPYQLGAASLGPSGSQQAGTAASLNVNLNMNTGNSGSARSTASPNPGKPKLRKRFSLRSVSRSVRGSVRGILHWKSTGSEASSPVSVEEREGLGGGLSSSYSYSGSVEEARGKGRGLHGQGAAGGLPPSLSLPLSAPSLPPSSSSSSSSFSSEQRERRKSAGNSGGGGNSDREKEKWTHRFERLRLSRSPPLPKPPPSDVRREGLLSFMVAEELLSGHTGGSGPGLTASMGGGASGSKARWQKCRLILRRDGRAGAASPTTPGPQSCLLEFFVPPKASKPRVTISCSSIVDVRTTTPLEMPDKENTFVLKMQGSVEYILETADSLQMRSWLADIQECISHSEHDDSLDTPCLSESLPSRELPITPGETNDPLTQGGYGGLGGPNSEMHPPELPPRAPLDESEGRLQGGGGANAVTPFSETPDGTGSFLFSEPPELLDHPLSDCPWFHGTLSRLKAAQLVLAGGTGSHGVFLVRQSETRRGEYVLTFNFQGKAKHLRLSLNEEGQCRVQHLWFQSIFDMLEHFRVHPIPLESGGASDVTLISFVVSANRQHDLTSRCHSPASLPLPPPPIPPPPPARPPPPSPPQEREREREGEREREHERERERERGSEGEGEECEEREGERGVTLRQLEAPPSESEERESVRTRAVDNQYSFF
SIO_010081: sh2b1
subclass of: SO_0000673
so part of: sh2b1
location: complement(join(523148..523461,524621..524792,532350..532555,532745..532894,532998..533098,535669..535760,540714..540815,541267..542730))
location: region:523148-542730:-1
so has part: feature:541267-542730:-1:exon
so has part: feature:540714-540815:-1:exon
so has part: feature:535669-535760:-1:exon
so has part: feature:532998-533098:-1:exon
so has part: feature:532745-532894:-1:exon
so has part: feature:532350-532555:-1:exon
so has part: feature:524621-524792:-1:exon
so has part: feature:523148-523461:-1:exon

XP_034770390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541267-542730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540714-540815:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535669-535760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532998-533098:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:532745-532894:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:532350-532555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524621-524792:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:523148-523461:-1:exon

sh2b1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: sh2b1
product: SH2B adaptor protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033998240.2
SIO_010081: sh2b1
subclass of: SO_0000673
so part of: sh2b1
location: complement(join(523311..523461,524094..524184,524621..524792,532350..532555,532745..532894,532998..533098,535669..535760,540714..540815,541267..542833,544682..545040))
location: region:523311-545040:-1
so has part: feature:544682-545040:-1:exon
so has part: feature:541267-542833:-1:exon
so has part: feature:540714-540815:-1:exon
so has part: feature:535669-535760:-1:exon
so has part: feature:532998-533098:-1:exon
so has part: feature:532745-532894:-1:exon
so has part: feature:532350-532555:-1:exon
so has part: feature:524621-524792:-1:exon
so has part: feature:524094-524184:-1:exon
so has part: feature:523311-523461:-1:exon

position:523311:-1
position: 523311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544682-545040:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541267-542833:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540714-540815:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:535669-535760:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:532998-533098:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:532745-532894:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:532350-532555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:524621-524792:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:524094-524184:-1:exon

position:524094:-1
position: 524094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524184:-1
position: 524184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:523311-523461:-1:exon

sh2b1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: sh2b1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2B adapter protein 1 isoform X2
translation: MNGTVLPSAPSGDGDLHPSGCCPPLPPGPSPLPDSPPPPPPPSWKEFCEIHAHAAAMEFACRFRLYLEDHPQYLSLPGGAGATFSRRFAERFVRHFESQVGGGAGGVANCLDSVSVETYCSNEEDSSSLTSPQQPTGGGRPLLSQGEPELDIIPLAQTPLPLPLPHPLHLPVQPISISSQSRSSEDISFSSISSFNNAAVSLAPRSGPGSATAPYQLGAASLGPSGSQQAGTAASLNVNLNMNTGNSGSARSTASPNPGKPKLRKRFSLRSVSRSVRGSVRGILHWKSTGSEASSPVSVEEREGLGGGLSSSYSYSGSVEEARGKGRGLHGQGAAGGLPPSLSLPLSAPSLPPSSSSSSSSFSSEQRERRKSAGNSGGGGNSDREKEKWTHRFERLRLSRSPPLPKPPPSDVRREGLLSFMVAEELLSGHTGGSGPGLTASMGGGASGSKARWQKCRLILRRDGRAGAASPTTPGPQSCLLEFFVPPKASKPRVTISCSSIVDVRTTTPLEMPDKENTFVLKMQGSVEYILETADSLQMRSWLADIQECISHSEHDDSLDTPCLSESLPSRELPITPGETNDPLTQGGYGGLGGPNSEMHPPELPPRAPLDESEGRLQGGGGANAVTPFSETPDGTGSFLFSEPPELLDHPLSDCPWFHGTLSRLKAAQLVLAGGTGSHGVFLVRQSETRRGEYVLTFNFQGKAKHLRLSLNEEGQCRVQHLWFQSIFDMLEHFRVHPIPLESGGASDVTLISFVVSANRQHGRDRSGSRSAVCDVITLRHPESPSTPISDCVLDQPMS
SIO_010081: sh2b1
subclass of: SO_0000673
so part of: sh2b1
location: complement(join(523440..523461,524094..524184,524621..524792,532350..532555,532745..532894,532998..533098,535669..535760,540714..540815,541267..542730))
location: region:523440-542730:-1
so has part: feature:541267-542730:-1:exon
so has part: feature:540714-540815:-1:exon
so has part: feature:535669-535760:-1:exon
so has part: feature:532998-533098:-1:exon
so has part: feature:532745-532894:-1:exon
so has part: feature:532350-532555:-1:exon
so has part: feature:524621-524792:-1:exon
so has part: feature:524094-524184:-1:exon
so has part: feature:523440-523461:-1:exon

XP_033854131.1
type: Protein
SIO_000068: ncbiprotein

position:523440:-1
position: 523440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541267-542730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540714-540815:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535669-535760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532998-533098:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:532745-532894:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:532350-532555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524621-524792:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:524094-524184:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:523440-523461:-1:exon

atxn2l
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: atxn2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 553440..591908
location: region:553440-591908:1
so has part: feature:553440-591908:1:exon
subclass of: SO_0000010

117398755
type: Gene
SIO_000068: ncbigene

position:553440:1
position: 553440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591908:1
position: 591908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553440-591908:1:exon

atxn2l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: atxn2l
product: ataxin 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033997798.2
SIO_010081: atxn2l
subclass of: SO_0000673
so part of: atxn2l
location: join(553440..553812,555217..555256,560865..560921,563189..563260,566002..566176,569083..569204,569457..569548,573486..573746,574165..574742,575944..576027,576536..576682,576885..576971,578144..578205,583196..583452,584022..584091,584583..584732,585736..585799,586431..586618,588353..588482,588704..588825,589100..589294,589515..589692,591430..591908)
location: region:553440-591908:1
so has part: feature:553440-553812:1:exon
so has part: feature:555217-555256:1:exon
so has part: feature:560865-560921:1:exon
so has part: feature:563189-563260:1:exon
so has part: feature:566002-566176:1:exon
so has part: feature:569083-569204:1:exon
so has part: feature:569457-569548:1:exon
so has part: feature:573486-573746:1:exon
so has part: feature:574165-574742:1:exon
so has part: feature:575944-576027:1:exon
so has part: feature:576536-576682:1:exon
so has part: feature:576885-576971:1:exon
so has part: feature:578144-578205:1:exon
so has part: feature:583196-583452:1:exon
so has part: feature:584022-584091:1:exon
so has part: feature:584583-584732:1:exon
so has part: feature:585736-585799:1:exon
so has part: feature:586431-586618:1:exon
so has part: feature:588353-588482:1:exon
so has part: feature:588704-588825:1:exon
so has part: feature:589100-589294:1:exon
so has part: feature:589515-589692:1:exon
so has part: feature:591430-591908:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:553440-553812:1:exon

position:553812:1
position: 553812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:555217-555256:1:exon

position:555217:1
position: 555217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555256:1
position: 555256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:560865-560921:1:exon

position:560865:1
position: 560865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560921:1
position: 560921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:563189-563260:1:exon

position:563189:1
position: 563189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563260:1
position: 563260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:566002-566176:1:exon

position:566002:1
position: 566002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566176:1
position: 566176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:569083-569204:1:exon

position:569083:1
position: 569083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569204:1
position: 569204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:569457-569548:1:exon

position:569457:1
position: 569457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569548:1
position: 569548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:573486-573746:1:exon

position:573486:1
position: 573486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573746:1
position: 573746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:574165-574742:1:exon

position:574165:1
position: 574165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574742:1
position: 574742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:575944-576027:1:exon

position:575944:1
position: 575944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576027:1
position: 576027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:576536-576682:1:exon

position:576536:1
position: 576536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576682:1
position: 576682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:576885-576971:1:exon

position:576885:1
position: 576885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576971:1
position: 576971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:578144-578205:1:exon

position:578144:1
position: 578144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578205:1
position: 578205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:583196-583452:1:exon

position:583196:1
position: 583196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583452:1
position: 583452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:584022-584091:1:exon

position:584022:1
position: 584022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584091:1
position: 584091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:584583-584732:1:exon

position:584583:1
position: 584583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584732:1
position: 584732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:585736-585799:1:exon

position:585736:1
position: 585736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585799:1
position: 585799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:586431-586618:1:exon

position:586431:1
position: 586431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586618:1
position: 586618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:588353-588482:1:exon

position:588353:1
position: 588353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588482:1
position: 588482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:588704-588825:1:exon

position:588704:1
position: 588704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588825:1
position: 588825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:589100-589294:1:exon

position:589100:1
position: 589100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589294:1
position: 589294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:589515-589692:1:exon

position:589515:1
position: 589515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589692:1
position: 589692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:591430-591908:1:exon

position:591430:1
position: 591430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

atxn2l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: atxn2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ataxin-2-like protein
translation: MLKQQLSVGGRKAANGTITTAGLTSSASTGSSSRPAAGRGRNSGKGPPQSSPVFEGVYNNSRMLHFLTAVVGSTCDIRVKNGNIYEGIFKTLSSKCELAVDAVHKKPPEQVSPGGVGTVAPPKREDIVDTMIFKPTDLVTMQFKNVDLNYAAKDKFTDSAISGSKVNGEHKEKVLQRWEGGDSNGESYDLESDAANGWDPNEMFRYNEENYGIKSTYDSSLSLYTVPLEKGTSEQFRQREARATKLASEIESSPQYRQRVSVENDEGRSEEDKYSSVVRERDRDRDSPRDRDRDSPRDRNRDRDSPSFSSSREGKYIPLPQRARESGVVRGCLRGSSGGGSQSLRGALGSRTVGSMSALPPRSGSAHPSTDGSGQSQPRGGSSLTETSLATRGSYSGHHLHHASGFQSHHTEPRGSLHPPSTDIATSPSLHGSAVESGVASPLSVAGSTSGLPPLSGATQALPRTISAETMAPQSTGQPQSNLPSTGSSAGSPAGQEQQRVLNGGASRMSPKSQRIASRTIKPSPTGTVTSAGVARASFSPRSLKSGSSQDSPLTPPYLDNTPVSTVTSKPFGPTPTFNVDVNEIISSGGKDRTLDSPGNAIDTPKPCVKAPTEHHRNQLEELRKFGKEFRLQSSSGAVDPEPGSKDIDSGSADAKQQRESCGGSVESLPVQAVDKQQQSGLSEPQTESSADRQSPGTPAAARTLSESEERPEGLPDQVKKSTLNPNAKEFNPNKSVLPVSKQTSTPTPPRPQTLPSPSITVLPPQNQGGLYNGPYISNVYQIHMGPAVQGPQMYQYTVSAVSQGKYPRAKGSVGPQRSDQHHTASAPPMMQAATAAGPPLVAASPYPSSYIQYPQQYPGQQAVMQAIQHYQSQPMYSMLQGGNPRMMTSGGHPQTLVSSSTPQYPSADQGPPQAMYATVPQPYPHHGTPLHPHQPQPASTPTGNQQGGQHPAPSPVQHQPGLGSGQPPQQGLYHTGALTPTPPSITPGPNSQSPQSGYSQQQVYAIHTQLQHGYPGLGQLAQAHVQGALSQGHPHSHPTGSHGPPQVMLLHAPPQQGHGGPPNHPGQGGQQSGTHYTYMHQVPVQPHPTQQLSFHPPGN
SIO_010081: atxn2l
subclass of: SO_0000673
so part of: atxn2l
location: join(553697..553812,555217..555256,560865..560921,563189..563260,566002..566176,569083..569204,569457..569548,573486..573746,574165..574742,575944..576027,576536..576682,576885..576971,578144..578205,583196..583452,584022..584091,584583..584732,585736..585799,586431..586618,588353..588482,588704..588825,589100..589294,589515..589692,591430..591485)
location: region:553697-591485:1
so has part: feature:553697-553812:1:exon
so has part: feature:555217-555256:1:exon
so has part: feature:560865-560921:1:exon
so has part: feature:563189-563260:1:exon
so has part: feature:566002-566176:1:exon
so has part: feature:569083-569204:1:exon
so has part: feature:569457-569548:1:exon
so has part: feature:573486-573746:1:exon
so has part: feature:574165-574742:1:exon
so has part: feature:575944-576027:1:exon
so has part: feature:576536-576682:1:exon
so has part: feature:576885-576971:1:exon
so has part: feature:578144-578205:1:exon
so has part: feature:583196-583452:1:exon
so has part: feature:584022-584091:1:exon
so has part: feature:584583-584732:1:exon
so has part: feature:585736-585799:1:exon
so has part: feature:586431-586618:1:exon
so has part: feature:588353-588482:1:exon
so has part: feature:588704-588825:1:exon
so has part: feature:589100-589294:1:exon
so has part: feature:589515-589692:1:exon
so has part: feature:591430-591485:1:exon

XP_033853689.2
type: Protein
SIO_000068: ncbiprotein

position:553697:1
position: 553697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591485:1
position: 591485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553697-553812:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:555217-555256:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560865-560921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563189-563260:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566002-566176:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:569083-569204:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:569457-569548:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:573486-573746:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:574165-574742:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:575944-576027:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:576536-576682:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:576885-576971:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:578144-578205:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:583196-583452:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:584022-584091:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:584583-584732:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:585736-585799:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:586431-586618:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:588353-588482:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:588704-588825:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:589100-589294:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:589515-589692:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:591430-591485:1:exon

LOC117398960
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398960
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(597807..609901)
location: region:597807-609901:-1
so has part: feature:597807-609901:-1:exon
subclass of: SO_0000010

117398960
type: Gene
SIO_000068: ncbigene

position:597807:-1
position: 597807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609901:-1
position: 609901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597807-609901:-1:exon

LOC117398960
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398960
product: coronin-1A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033998054.2
SIO_010081: LOC117398960
subclass of: SO_0000673
so part of: LOC117398960
location: complement(join(597807..598659,598919..599128,599494..599551,599791..599936,600243..600347,600816..600935,601749..601930,602629..602758,603554..603676,604665..604875,609800..609901))
location: region:597807-609901:-1
so has part: feature:609800-609901:-1:exon
so has part: feature:604665-604875:-1:exon
so has part: feature:603554-603676:-1:exon
so has part: feature:602629-602758:-1:exon
so has part: feature:601749-601930:-1:exon
so has part: feature:600816-600935:-1:exon
so has part: feature:600243-600347:-1:exon
so has part: feature:599791-599936:-1:exon
so has part: feature:599494-599551:-1:exon
so has part: feature:598919-599128:-1:exon
so has part: feature:597807-598659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:609800-609901:-1:exon

position:609800:-1
position: 609800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:604665-604875:-1:exon

position:604665:-1
position: 604665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604875:-1
position: 604875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:603554-603676:-1:exon

position:603554:-1
position: 603554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603676:-1
position: 603676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:602629-602758:-1:exon

position:602629:-1
position: 602629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602758:-1
position: 602758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:601749-601930:-1:exon

position:601749:-1
position: 601749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601930:-1
position: 601930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:600816-600935:-1:exon

position:600816:-1
position: 600816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600935:-1
position: 600935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:600243-600347:-1:exon

position:600243:-1
position: 600243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600347:-1
position: 600347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:599791-599936:-1:exon

position:599791:-1
position: 599791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599936:-1
position: 599936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:599494-599551:-1:exon

position:599494:-1
position: 599494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599551:-1
position: 599551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:598919-599128:-1:exon

position:598919:-1
position: 598919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599128:-1
position: 599128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:597807-598659:-1:exon

position:598659:-1
position: 598659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398960
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coronin-1A-like
translation: MAPKVVRSSKFRHVFGQGVKADQCYDDVRISQMTWDSNFCTVNPKFVAMIVEASGGGAFMVLPLSKTGRVDMSQPLVCGHTGPVLDIEWCPHNDNIIASGSEDCTVMIWEIPDGGLTRPITEPVVTLEGHSKRVGILSWHPTAHNVLLSAGCDNVVIIWNVARGEPVITLDSMHTDMIYSACWNATGSQIVTSCKDKKIRVIDPRKGSVVVEKDKPHEGSRPVRAIFVSEGKILTTGFNRMSERQVALWDPKHLEEPLTLQELDTSSGVLLPFFDPDTGIVYLCGKGDSSIRYFEITDEQPYVHYLSMYTSKESQRGLGYMPKRGLEVNKCEIARFYKLHERKCEPIVMTVPRKSDLFQEDLYPDTAGPEPSVEADDWFAGRDGELILISLRDGFAATKTREFKVNKTLLAKTTATARPSVEASDLQSLIDELKKLKTVVEEQNKRICELEGKVGK
SIO_010081: LOC117398960
subclass of: SO_0000673
so part of: LOC117398960
location: complement(join(598561..598659,598919..599128,599494..599551,599791..599936,600243..600347,600816..600935,601749..601930,602629..602758,603554..603676,604665..604862))
location: region:598561-604862:-1
so has part: feature:604665-604862:-1:exon
so has part: feature:603554-603676:-1:exon
so has part: feature:602629-602758:-1:exon
so has part: feature:601749-601930:-1:exon
so has part: feature:600816-600935:-1:exon
so has part: feature:600243-600347:-1:exon
so has part: feature:599791-599936:-1:exon
so has part: feature:599494-599551:-1:exon
so has part: feature:598919-599128:-1:exon
so has part: feature:598561-598659:-1:exon

XP_033853945.1
type: Protein
SIO_000068: ncbiprotein

position:598561:-1
position: 598561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604862:-1
position: 604862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604665-604862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603554-603676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602629-602758:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:601749-601930:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:600816-600935:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:600243-600347:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599791-599936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:599494-599551:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:598919-599128:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:598561-598659:-1:exon

mettl3
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: mettl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(643496..668270)
location: region:643496-668270:-1
so has part: feature:643496-668270:-1:exon
subclass of: SO_0000010

117398967
type: Gene
SIO_000068: ncbigene

position:643496:-1
position: 643496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668270:-1
position: 668270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643496-668270:-1:exon

mettl3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: mettl3
product: methyltransferase like 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914418.1
SIO_010081: mettl3
subclass of: SO_0000673
so part of: mettl3
location: complement(join(643496..644856,645422..645534,646290..646355,646893..647001,647451..647489,648278..648465,649065..649108,649628..649824,650065..650258,651067..651130,651168..651769,658728..658921,667900..668270))
location: region:643496-668270:-1
so has part: feature:667900-668270:-1:exon
so has part: feature:658728-658921:-1:exon
so has part: feature:651168-651769:-1:exon
so has part: feature:651067-651130:-1:exon
so has part: feature:650065-650258:-1:exon
so has part: feature:649628-649824:-1:exon
so has part: feature:649065-649108:-1:exon
so has part: feature:648278-648465:-1:exon
so has part: feature:647451-647489:-1:exon
so has part: feature:646893-647001:-1:exon
so has part: feature:646290-646355:-1:exon
so has part: feature:645422-645534:-1:exon
so has part: feature:643496-644856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:667900-668270:-1:exon

position:667900:-1
position: 667900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:658728-658921:-1:exon

position:658728:-1
position: 658728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658921:-1
position: 658921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:651168-651769:-1:exon

position:651168:-1
position: 651168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651769:-1
position: 651769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:651067-651130:-1:exon

position:651067:-1
position: 651067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651130:-1
position: 651130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:650065-650258:-1:exon

position:650065:-1
position: 650065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650258:-1
position: 650258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:649628-649824:-1:exon

position:649628:-1
position: 649628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649824:-1
position: 649824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:649065-649108:-1:exon

position:649065:-1
position: 649065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649108:-1
position: 649108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:648278-648465:-1:exon

position:648278:-1
position: 648278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648465:-1
position: 648465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:647451-647489:-1:exon

position:647451:-1
position: 647451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647489:-1
position: 647489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:646893-647001:-1:exon

position:646893:-1
position: 646893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647001:-1
position: 647001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:646290-646355:-1:exon

position:646290:-1
position: 646290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646355:-1
position: 646355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:645422-645534:-1:exon

position:645422:-1
position: 645422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645534:-1
position: 645534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:643496-644856:-1:exon

position:644856:-1
position: 644856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mettl3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: mettl3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N6-adenosine-methyltransferase subunit METTL3
translation: MSDTWSNIQAHKKQLDSLRERLQRRRKDTTQLGIDLSNPDPGQARSDSPGPVARPGQERESQQDVRIDPVLERTLLLYLCDIGLALPIDSLAITSALSTPENPVEQACVESLLLKFAAQELIEVRPLTSDPSRPPPPTLVTSADHPKLWAMRGAVTSNTADLGEPNTAAHAQPARGGVKRKGADLESSPAPSSSTPSYASPAPSSSMSSSMSQIASASSLPPISSISFSPSPSLSLSPALSSLASSGDKKGQGAPGDPPALKKSRGGKVRASDLHLEIESLLSQQSTKEQQSKKVRSERIIEKLTLLHPGKSPLNELLAARVSPRGPGAAEGGFTEHGVGSRASCVKFRSRSSEPQGGQEFCDQGTKEECVRACEGGPPCRKLHFRRIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDCPPDVEEGELEGAQSSGAQLGLLASESVCPQHTVGVSDVEEVSPVAWICCDIRYLDASILGKFAVVMADPPWDIHMELPYGTLTDDEMRKLHIPMLQDDGFLFLWVTGRAMELGRECLKLWGYERADEIIWVKTNQLQRIIRTGRTGHWLNHGKEHCLVGVKGSPQGFNRGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIELFGRPHNVQPNWVTLGNQLDGIHLLDPDVVSRFKKRYPDGVISKPKNM
SIO_010081: mettl3
subclass of: SO_0000673
so part of: mettl3
location: complement(join(644745..644856,645422..645534,646290..646355,646893..647001,647451..647489,648278..648465,649065..649108,649628..649824,650065..650258,651067..651130,651168..651769,658728..658921,667900..668002))
location: region:644745-668002:-1
so has part: feature:667900-668002:-1:exon
so has part: feature:658728-658921:-1:exon
so has part: feature:651168-651769:-1:exon
so has part: feature:651067-651130:-1:exon
so has part: feature:650065-650258:-1:exon
so has part: feature:649628-649824:-1:exon
so has part: feature:649065-649108:-1:exon
so has part: feature:648278-648465:-1:exon
so has part: feature:647451-647489:-1:exon
so has part: feature:646893-647001:-1:exon
so has part: feature:646290-646355:-1:exon
so has part: feature:645422-645534:-1:exon
so has part: feature:644745-644856:-1:exon

XP_034770309.1
type: Protein
SIO_000068: ncbiprotein

position:644745:-1
position: 644745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668002:-1
position: 668002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667900-668002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658728-658921:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:651168-651769:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651067-651130:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650065-650258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649628-649824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:649065-649108:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648278-648465:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:647451-647489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:646893-647001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:646290-646355:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:645422-645534:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:644745-644856:-1:exon

ttc5
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: ttc5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 668477..689032
location: region:668477-689032:1
so has part: feature:668477-689032:1:exon
subclass of: SO_0000010

117398878
type: Gene
SIO_000068: ncbigene

position:668477:1
position: 668477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689032:1
position: 689032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668477-689032:1:exon

ttc5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: ttc5
product: tetratricopeptide repeat domain 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914419.1
SIO_010081: ttc5
subclass of: SO_0000673
so part of: ttc5
location: join(668477..668556,670087..670219,672455..672666,675767..675914,679047..679135,680052..680198,681963..682177,682594..682738,688294..689032)
location: region:668477-689032:1
so has part: feature:668477-668556:1:exon
so has part: feature:670087-670219:1:exon
so has part: feature:672455-672666:1:exon
so has part: feature:675767-675914:1:exon
so has part: feature:679047-679135:1:exon
so has part: feature:680052-680198:1:exon
so has part: feature:681963-682177:1:exon
so has part: feature:682594-682738:1:exon
so has part: feature:688294-689032:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:668477-668556:1:exon

position:668556:1
position: 668556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:670087-670219:1:exon

position:670087:1
position: 670087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670219:1
position: 670219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:672455-672666:1:exon

position:672455:1
position: 672455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672666:1
position: 672666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:675767-675914:1:exon

position:675767:1
position: 675767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675914:1
position: 675914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:679047-679135:1:exon

position:679047:1
position: 679047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679135:1
position: 679135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:680052-680198:1:exon

position:680052:1
position: 680052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680198:1
position: 680198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:681963-682177:1:exon

position:681963:1
position: 681963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682177:1
position: 682177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:682594-682738:1:exon

position:682594:1
position: 682594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682738:1
position: 682738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:688294-689032:1:exon

position:688294:1
position: 688294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ttc5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: ttc5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 5
translation: MAGRATPSETATDEKDDLHYLRELVDALYHFRDHYFETHSVEEANRKQSDVAAEMGKTLSSLEEMEGSCTDKAVFLLLKGRTLNVGPEFSSQAEDALSRAVKLDPTLVEAWNQLGEVYWKKGDVSGARTCFSGAQNHCKNKVSLRNLSMVLRQIQTPNEDNSKNVFESVSKAKQAVQLDIADGTSWLSGCVVFTFPQEKMDSTASSNPDLHLNRATLYKFEEQFAEALHGFSRAAALDPAWTEPPERERQLLDYLDRLTALISNKGKVKVKRLQSMLGSLRPTDLRACCDGQYQNSTGQRVKLDRQQLASLKAGVNTGGAVLGRVVFSITPEEKVPFTFGLVDTEGTCCAVMVYNMAESWGVLIGDSVAIPEPNVKLHNLTHKGKTYAFQSIRVYSPLMLIVNGKKQGPNCLASATVTYKPQSD
SIO_010081: ttc5
subclass of: SO_0000673
so part of: ttc5
location: join(668491..668556,670087..670219,672455..672666,675767..675914,679047..679135,680052..680198,681963..682177,682594..682738,688294..688413)
location: region:668491-688413:1
so has part: feature:668491-668556:1:exon
so has part: feature:670087-670219:1:exon
so has part: feature:672455-672666:1:exon
so has part: feature:675767-675914:1:exon
so has part: feature:679047-679135:1:exon
so has part: feature:680052-680198:1:exon
so has part: feature:681963-682177:1:exon
so has part: feature:682594-682738:1:exon
so has part: feature:688294-688413:1:exon

XP_034770310.1
type: Protein
SIO_000068: ncbiprotein

position:668491:1
position: 668491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688413:1
position: 688413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668491-668556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:670087-670219:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:672455-672666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675767-675914:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:679047-679135:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:680052-680198:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:681963-682177:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:682594-682738:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:688294-688413:1:exon

LOC117398903
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(697002..711297)
location: region:697002-711297:-1
so has part: feature:697002-711297:-1:exon
subclass of: SO_0000010

117398903
type: Gene
SIO_000068: ncbigene

position:697002:-1
position: 697002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711297:-1
position: 711297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697002-711297:-1:exon

LOC117398903
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398903
product: E3 ubiquitin-protein ligase CCNB1IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914501.1
SIO_010081: LOC117398903
subclass of: SO_0000673
so part of: LOC117398903
location: complement(join(697002..697277,697475..697817,702655..702960,711225..711297))
location: region:697002-711297:-1
so has part: feature:711225-711297:-1:exon
so has part: feature:702655-702960:-1:exon
so has part: feature:697475-697817:-1:exon
so has part: feature:697002-697277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:711225-711297:-1:exon

position:711225:-1
position: 711225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:702655-702960:-1:exon

position:702655:-1
position: 702655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702960:-1
position: 702960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:697475-697817:-1:exon

position:697475:-1
position: 697475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697817:-1
position: 697817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:697002-697277:-1:exon

position:697277:-1
position: 697277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398903
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CCNB1IP1
translation: MALYEDTLLCNFPKCRAKLSGFAWVTACSHIFCDPHGSGEFSRSPAVCPACSSALSGKLDIVRSELSPPEEYKAMVLAGLRPEIVLEISSRALAFWTYQVQQERLHQQYSLSRLEEQLKQTELLCSQRLQGKECEVSGVKGELSALSKLLEEYKRKYSDVSEKLMERNRQHHKLQGLYDSLRLRNMAASSQERERESRERERGSHNYIFSRAVGQPKFHTPQGSRSHCGEGDHKNRHALFYSPPPGGTVPTAAASGFEAEKEGFFQFPSPAREGPHSYYMQKQ
SIO_010081: LOC117398903
subclass of: SO_0000673
so part of: LOC117398903
location: complement(join(697066..697277,697475..697817,702655..702951))
location: region:697066-702951:-1
so has part: feature:702655-702951:-1:exon
so has part: feature:697475-697817:-1:exon
so has part: feature:697066-697277:-1:exon

XP_034770392.1
type: Protein
SIO_000068: ncbiprotein

position:697066:-1
position: 697066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702951:-1
position: 702951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702655-702951:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:697475-697817:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:697066-697277:-1:exon

LOC117398840
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 709684..725833
location: region:709684-725833:1
so has part: feature:709684-725833:1:exon
subclass of: SO_0000010

117398840
type: Gene
SIO_000068: ncbigene

position:709684:1
position: 709684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725833:1
position: 725833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709684-725833:1:exon

LOC117398840
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398840
product: sal-like protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033997929.2
SIO_010081: LOC117398840
subclass of: SO_0000673
so part of: LOC117398840
location: join(709684..709809,720858..723313,724383..725833)
location: region:709684-725833:1
so has part: feature:709684-709809:1:exon
so has part: feature:720858-723313:1:exon
so has part: feature:724383-725833:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:709684-709809:1:exon

position:709809:1
position: 709809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:720858-723313:1:exon

position:720858:1
position: 720858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723313:1
position: 723313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:724383-725833:1:exon

position:724383:1
position: 724383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398840
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398840
product: sal-like protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033997928.2
SIO_010081: LOC117398840
subclass of: SO_0000673
so part of: LOC117398840
location: join(714590..714721,720858..723313,724383..725833)
location: region:714590-725833:1
so has part: feature:714590-714721:1:exon
so has part: feature:720858-723313:1:exon
so has part: feature:724383-725833:1:exon

position:714590:1
position: 714590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:714590-714721:1:exon

position:714721:1
position: 714721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:720858-723313:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:724383-725833:1:exon

LOC117398840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sal-like protein 2 isoform X1
translation: MSRRKQKRPQQLLNSNLDGSLVTSATGDNAEKATDDSRPLTESPAVCDQCCAQFNQQSELLQHRKHCPSNQQVIIPACSSNDPSPFPPKQEGQTNTSLNPSSSHPGHTPYSFSPSQPGFHKGIRKVPFGEAGPIALQKQSGRDMASPKLGVSAFTNTPSPTHPGSSTPAFDGMPSPTTPPNFGEGKNFLSIPMILEELRILQQRQIHQMQMTEQICRQVLQLGSHNNYNNYRNASLESSPIYNSILHTESSPQILKPINPGLLRLLVPNSIYKTEDGNPGQKPIAASAPYLPKFGPDLQNLSPSLGATLGHLVPTTLRDYPASFEKSGGEDRHRCRFCGKTFGSDSALQIHLRSHTGERPYQCTICLNRFTTRGNLKVHFHRHREHYPHVSMNPYPMQEPSDASNNNDNEFGRSSSIPGSSSTASTPSPSSNLIPFPFSAPHQKVPTIPLPPSMDLALLTTAHSLLSLNRPPSKAGDGKPDENTPPQSQVPKILPGFVFSQLRPSGPYSSFSPLPKPSETSKLQRLVENLDKQSAVPQALSLSGDATNGHQCTICHRVLSCPRALQLHYATHSGERPFRCKVCGRAFSTKGNLRAHQATHKSRPLARTQNSCPICQRKFTNAVVLQHHIRMHLGGQIPNLPNISTALPGLLPEAGRRISDQGNTGPQLKIEGEREEEEEGGDEAGQPSPTSAPEGSATSNSEGCANCKKNGSPSKIGGCANCNPRVPHPELGDSEIQGSPENEGAPFLVEDYVGHVSPGVNFGSETPVGSPYPPTPGSLAITPPANSSQTPRKPPQTGRQHLCLSCNKTFSSASALQIHDRIHTGEKPYSCAVCGRAFTTKGNLKVHMSTHVWGSTPPPARRGRRLSLDHSTLVPLLPTDPLSFPAAPPVVGVSGGGPLSFWNQYTAFLSNTMAPKHKEAGFTATSANRIVLPAPVVASLAAAPPIPPTPPPLAAGPLVEGAGLSSRDTGLAETNAATETPLPSVVRAPEGVPEKEIGSERRGGGEEAESQVEETPVDIDTDSKETVAEEIHSEKELP
SIO_010081: LOC117398840
subclass of: SO_0000673
so part of: LOC117398840
location: join(714643..714721,720858..723313,724383..724964)
location: region:714643-724964:1
so has part: feature:714643-714721:1:exon
so has part: feature:720858-723313:1:exon
so has part: feature:724383-724964:1:exon

XP_033853819.2
type: Protein
SIO_000068: ncbiprotein

position:714643:1
position: 714643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724964:1
position: 724964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:714643-714721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720858-723313:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:724383-724964:1:exon

LOC117398840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sal-like protein 2 isoform X2
translation: MASPKLGVSAFTNTPSPTHPGSSTPAFDGMPSPTTPPNFGEGKNFLSIPMILEELRILQQRQIHQMQMTEQICRQVLQLGSHNNYNNYRNASLESSPIYNSILHTESSPQILKPINPGLLRLLVPNSIYKTEDGNPGQKPIAASAPYLPKFGPDLQNLSPSLGATLGHLVPTTLRDYPASFEKSGGEDRHRCRFCGKTFGSDSALQIHLRSHTGERPYQCTICLNRFTTRGNLKVHFHRHREHYPHVSMNPYPMQEPSDASNNNDNEFGRSSSIPGSSSTASTPSPSSNLIPFPFSAPHQKVPTIPLPPSMDLALLTTAHSLLSLNRPPSKAGDGKPDENTPPQSQVPKILPGFVFSQLRPSGPYSSFSPLPKPSETSKLQRLVENLDKQSAVPQALSLSGDATNGHQCTICHRVLSCPRALQLHYATHSGERPFRCKVCGRAFSTKGNLRAHQATHKSRPLARTQNSCPICQRKFTNAVVLQHHIRMHLGGQIPNLPNISTALPGLLPEAGRRISDQGNTGPQLKIEGEREEEEEGGDEAGQPSPTSAPEGSATSNSEGCANCKKNGSPSKIGGCANCNPRVPHPELGDSEIQGSPENEGAPFLVEDYVGHVSPGVNFGSETPVGSPYPPTPGSLAITPPANSSQTPRKPPQTGRQHLCLSCNKTFSSASALQIHDRIHTGEKPYSCAVCGRAFTTKGNLKVHMSTHVWGSTPPPARRGRRLSLDHSTLVPLLPTDPLSFPAAPPVVGVSGGGPLSFWNQYTAFLSNTMAPKHKEAGFTATSANRIVLPAPVVASLAAAPPIPPTPPPLAAGPLVEGAGLSSRDTGLAETNAATETPLPSVVRAPEGVPEKEIGSERRGGGEEAESQVEETPVDIDTDSKETVAEEIHSEKELP
SIO_010081: LOC117398840
subclass of: SO_0000673
so part of: LOC117398840
location: join(721208..723313,724383..724964)
location: region:721208-724964:1
so has part: feature:721208-723313:1:exon
so has part: feature:724383-724964:1:exon

XP_033853820.2
type: Protein
SIO_000068: ncbiprotein

position:721208:1
position: 721208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721208-723313:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:724383-724964:1:exon

slc7a7
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: slc7a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 740362..759163
location: region:740362-759163:1
so has part: feature:740362-759163:1:exon
subclass of: SO_0000010

117398868
type: Gene
SIO_000068: ncbigene

position:740362:1
position: 740362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759163:1
position: 759163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740362-759163:1:exon

slc7a7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: slc7a7
product: solute carrier family 7 member 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033997960.2
SIO_010081: slc7a7
subclass of: SO_0000673
so part of: slc7a7
location: join(740362..740476,747912..748523,752408..752533,752791..752935,753308..753431,754376..754479,754870..754966,757239..757388,757964..758147,758779..759163)
location: region:740362-759163:1
so has part: feature:740362-740476:1:exon
so has part: feature:747912-748523:1:exon
so has part: feature:752408-752533:1:exon
so has part: feature:752791-752935:1:exon
so has part: feature:753308-753431:1:exon
so has part: feature:754376-754479:1:exon
so has part: feature:754870-754966:1:exon
so has part: feature:757239-757388:1:exon
so has part: feature:757964-758147:1:exon
so has part: feature:758779-759163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:740362-740476:1:exon

position:740476:1
position: 740476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:747912-748523:1:exon

position:747912:1
position: 747912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748523:1
position: 748523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:752408-752533:1:exon

position:752408:1
position: 752408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752533:1
position: 752533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:752791-752935:1:exon

position:752791:1
position: 752791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752935:1
position: 752935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:753308-753431:1:exon

position:753308:1
position: 753308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753431:1
position: 753431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:754376-754479:1:exon

position:754376:1
position: 754376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754479:1
position: 754479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:754870-754966:1:exon

position:754870:1
position: 754870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754966:1
position: 754966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:757239-757388:1:exon

position:757239:1
position: 757239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757388:1
position: 757388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:757964-758147:1:exon

position:757964:1
position: 757964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758147:1
position: 758147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:758779-759163:1:exon

position:758779:1
position: 758779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

slc7a7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: slc7a7
product: solute carrier family 7 member 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033997959.2
SIO_010081: slc7a7
subclass of: SO_0000673
so part of: slc7a7
location: join(743717..743864,747912..748523,752408..752533,752791..752935,753308..753431,754376..754479,754870..754966,757239..757388,757964..758147,758779..759163)
location: region:743717-759163:1
so has part: feature:743717-743864:1:exon
so has part: feature:747912-748523:1:exon
so has part: feature:752408-752533:1:exon
so has part: feature:752791-752935:1:exon
so has part: feature:753308-753431:1:exon
so has part: feature:754376-754479:1:exon
so has part: feature:754870-754966:1:exon
so has part: feature:757239-757388:1:exon
so has part: feature:757964-758147:1:exon
so has part: feature:758779-759163:1:exon

position:743717:1
position: 743717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743717-743864:1:exon

position:743864:1
position: 743864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:747912-748523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:752408-752533:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:752791-752935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:753308-753431:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:754376-754479:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:754870-754966:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:757239-757388:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:757964-758147:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:758779-759163:1:exon

slc7a7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: slc7a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Y+L amino acid transporter 1
translation: MADNIKYSPAPTQDSTATVTNGQPITDKAAAQDSMTLKKEISLLNGVCLIVGNMIGSGIFVSPKGVLMHSGSYGLSLVIWAIGGLFSVFGALCYAELGTTITKSGASYAYILEAFGGFIAFIRLWTSLLIIEPTSQAVIAITFSNYMVQPIFPTCESPYIANRLLAAACICLLTFVNCAYVKWGTRVQDLFTYAKVIALIAVIITGIVKLGQGYTQNFDNVFEGSSLDAGNMALALYSALFSYSGWDTLNFVTEEIKDPQRNLPLAIGISMPIVTVIYILTNVAYYTVLQIPEILDSNAVAVTFADQVFGIFNWTIPLAVALSCFGGLNASILAASRLFFVGSREGHLPDSLCMIHVERYTPIPALLFNGAMSLVYLCVEDIFQLINYYSFSYWFFVGLSIAGQLYLRWKEPDRPRPLKLSLVFPVIFCLCTVFLVAVPLYSDTINSLIGIGIALSGVPVYLLCCYIPEHRRPLCLRKTIAALAKFIQMICFSVLTEMDIDDDKTE
SIO_010081: slc7a7
subclass of: SO_0000673
so part of: slc7a7
location: join(748013..748523,752408..752533,752791..752935,753308..753431,754376..754479,754870..754966,757239..757388,757964..758147,758779..758858)
location: region:748013-758858:1
so has part: feature:748013-748523:1:exon
so has part: feature:752408-752533:1:exon
so has part: feature:752791-752935:1:exon
so has part: feature:753308-753431:1:exon
so has part: feature:754376-754479:1:exon
so has part: feature:754870-754966:1:exon
so has part: feature:757239-757388:1:exon
so has part: feature:757964-758147:1:exon
so has part: feature:758779-758858:1:exon

XP_033853850.1
type: Protein
SIO_000068: ncbiprotein

position:748013:1
position: 748013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758858:1
position: 758858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:748013-748523:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752408-752533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:752791-752935:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:753308-753431:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:754376-754479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:754870-754966:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:757239-757388:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:757964-758147:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758779-758858:1:exon

slc7a7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: slc7a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Y+L amino acid transporter 1
translation: MADNIKYSPAPTQDSTATVTNGQPITDKAAAQDSMTLKKEISLLNGVCLIVGNMIGSGIFVSPKGVLMHSGSYGLSLVIWAIGGLFSVFGALCYAELGTTITKSGASYAYILEAFGGFIAFIRLWTSLLIIEPTSQAVIAITFSNYMVQPIFPTCESPYIANRLLAAACICLLTFVNCAYVKWGTRVQDLFTYAKVIALIAVIITGIVKLGQGYTQNFDNVFEGSSLDAGNMALALYSALFSYSGWDTLNFVTEEIKDPQRNLPLAIGISMPIVTVIYILTNVAYYTVLQIPEILDSNAVAVTFADQVFGIFNWTIPLAVALSCFGGLNASILAASRLFFVGSREGHLPDSLCMIHVERYTPIPALLFNGAMSLVYLCVEDIFQLINYYSFSYWFFVGLSIAGQLYLRWKEPDRPRPLKLSLVFPVIFCLCTVFLVAVPLYSDTINSLIGIGIALSGVPVYLLCCYIPEHRRPLCLRKTIAALAKFIQMICFSVLTEMDIDDDKTE
SIO_010081: slc7a7
subclass of: SO_0000673
so part of: slc7a7
location: join(748013..748523,752408..752533,752791..752935,753308..753431,754376..754479,754870..754966,757239..757388,757964..758147,758779..758858)
location: region:748013-758858:1
so has part: feature:748013-748523:1:exon
so has part: feature:752408-752533:1:exon
so has part: feature:752791-752935:1:exon
so has part: feature:753308-753431:1:exon
so has part: feature:754376-754479:1:exon
so has part: feature:754870-754966:1:exon
so has part: feature:757239-757388:1:exon
so has part: feature:757964-758147:1:exon
so has part: feature:758779-758858:1:exon

XP_033853851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:748013-748523:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752408-752533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:752791-752935:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:753308-753431:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:754376-754479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:754870-754966:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:757239-757388:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:757964-758147:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758779-758858:1:exon

oxa1l
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: oxa1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(760041..777924)
location: region:760041-777924:-1
so has part: feature:760041-777924:-1:exon
subclass of: SO_0000010

117398877
type: Gene
SIO_000068: ncbigene

position:760041:-1
position: 760041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777924:-1
position: 777924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760041-777924:-1:exon

oxa1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: oxa1l
product: OXA1L mitochondrial inner membrane protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033997972.2
SIO_010081: oxa1l
subclass of: SO_0000673
so part of: oxa1l
location: complement(join(760041..760396,760720..760800,768223..768385,770456..770560,770878..771042,771236..771321,772099..772242,775160..775388,777320..777463,777795..777924))
location: region:760041-777924:-1
so has part: feature:777795-777924:-1:exon
so has part: feature:777320-777463:-1:exon
so has part: feature:775160-775388:-1:exon
so has part: feature:772099-772242:-1:exon
so has part: feature:771236-771321:-1:exon
so has part: feature:770878-771042:-1:exon
so has part: feature:770456-770560:-1:exon
so has part: feature:768223-768385:-1:exon
so has part: feature:760720-760800:-1:exon
so has part: feature:760041-760396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:777795-777924:-1:exon

position:777795:-1
position: 777795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:777320-777463:-1:exon

position:777320:-1
position: 777320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777463:-1
position: 777463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:775160-775388:-1:exon

position:775160:-1
position: 775160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775388:-1
position: 775388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:772099-772242:-1:exon

position:772099:-1
position: 772099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772242:-1
position: 772242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:771236-771321:-1:exon

position:771236:-1
position: 771236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771321:-1
position: 771321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:770878-771042:-1:exon

position:770878:-1
position: 770878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771042:-1
position: 771042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:770456-770560:-1:exon

position:770456:-1
position: 770456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770560:-1
position: 770560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:768223-768385:-1:exon

position:768223:-1
position: 768223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768385:-1
position: 768385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:760720-760800:-1:exon

position:760720:-1
position: 760720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760800:-1
position: 760800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:760041-760396:-1:exon

position:760396:-1
position: 760396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

oxa1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: oxa1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial inner membrane protein OXA1L
translation: MAAFRVKVTRGSLMKCFNNNNINIHGINPQTFLLPNPHAKRSLLQRSWIHTVWSGGVCGRSLGGARGRQSNGQFVLVTAVAVRHNSTEVPINTAAGTAPSLLQPITEQAAESAPTVLDVLQEAGPELSLSELGLGAYTPVGLIQNILECLHLNLGLPWWGAIVVGTVLARCLVFPVIVKGQREAAKLNNHLPEMTKLTNRMNEAKHSGNKFDFSKAYSDMMIFQKKHDINPFRGFLVPLVQAPIFISFFIALRKMAYLPVPSMQSGGLWWFTDLTLSDPLYILPLAVTGTMFAIIELGAESGVDNPNLRAMKTVFRVMPFVILPLTISFPTAIFTYWMTSNVFSLAQVGFLKIPAVRRRLGIPDRVTHDPSSLPQQDGFLQSMRTGWKNAQLSHQLEERERRIKNHLDMAAKGPLRQTFTQNPLQQPQQLVAKAKGASAGSVSKDKKRPWEETIG
SIO_010081: oxa1l
subclass of: SO_0000673
so part of: oxa1l
location: complement(join(760266..760396,760720..760800,768223..768385,770456..770560,770878..771042,771236..771321,772099..772242,775160..775388,777320..777463,777795..777914))
location: region:760266-777914:-1
so has part: feature:777795-777914:-1:exon
so has part: feature:777320-777463:-1:exon
so has part: feature:775160-775388:-1:exon
so has part: feature:772099-772242:-1:exon
so has part: feature:771236-771321:-1:exon
so has part: feature:770878-771042:-1:exon
so has part: feature:770456-770560:-1:exon
so has part: feature:768223-768385:-1:exon
so has part: feature:760720-760800:-1:exon
so has part: feature:760266-760396:-1:exon

XP_033853863.2
type: Protein
SIO_000068: ncbiprotein

position:760266:-1
position: 760266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777914:-1
position: 777914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777795-777914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:777320-777463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:775160-775388:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:772099-772242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:771236-771321:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:770878-771042:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:770456-770560:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:768223-768385:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:760720-760800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:760266-760396:-1:exon

LOC117398881
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398881
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(782577..783728)
location: region:782577-783728:-1
so has part: feature:782577-783728:-1:exon
subclass of: SO_0000010

117398881
type: Gene
SIO_000068: ncbigene

position:782577:-1
position: 782577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783728:-1
position: 783728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:782577-783728:-1:exon

LOC117398881
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398881
product: zinc finger protein 239-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_034914420.1
SIO_010081: LOC117398881
subclass of: SO_0000673
so part of: LOC117398881
location: complement(782577..783728)
location: region:782577-783728:-1
so has part: feature:782577-783728:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:782577-783728:-1:exon

LOC117398881
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398881
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MADRKKRKLRVKEPAMKTEEAPSSPPGSPPAPEPAEGGGEEPSHSTHQCKECGKEFPRLWDLRYHLRSHQEGRGFPCSTCGKAFFQSSSLLRHELSHRGERPFQCSECGKSFAHSAQLENHRRSHSGERPFVCLTCGKGFMSSSHLSQHKRTHWPAESRHACPLCGKTFSRPWNVLQHLRFHTGERNFHCEACGKNFFRSSDLLRHQRIHTGERPFRCEVCGKTFSRSSVLAKHTRIHTGERPFQCEACARGFITSSQLVEHRRTHTGETPYLCSDCGKTFKFSFLLKRHMRTHSGERPYPCADCAKAFKTSGHLHKHQLIHAREGRYRCMLCQQLFPNQMKLDRHSRAEHVQEEGVEPGGSGVPTRGGAGAGAGGEGKDGED
SIO_010081: LOC117398881
subclass of: SO_0000673
so part of: LOC117398881
location: complement(782577..783728)
location: region:782577-783728:-1
so has part: feature:782577-783728:-1:exon

XP_034770311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:782577-783728:-1:exon

chd8
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: chd8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(806598..867841)
location: region:806598-867841:-1
so has part: feature:806598-867841:-1:exon
subclass of: SO_0000010

117398828
type: Gene
SIO_000068: ncbigene

position:806598:-1
position: 806598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867841:-1
position: 867841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806598-867841:-1:exon

chd8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: chd8
product: chromodomain helicase DNA binding protein 8
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034914459.1
SIO_010081: chd8
subclass of: SO_0000673
so part of: chd8
location: complement(join(806598..808455,811158..811262,811920..812039,812558..812728,813209..813310,813983..814174,814888..815021,815226..815927,816555..816763,816882..817086,817306..817357,817651..817726,818024..818153,818311..818414,818696..818785,820776..820932,822018..822217,823552..823745,826081..826191,830701..830880,831248..831415,832034..832229,833868..834078,840581..840839,841561..841704,844805..844981,845269..845553,846314..846435,848672..848809,848909..848992,849777..849894,850009..850064,851423..851491,852175..852354,854411..854522,856084..856545,859097..859207,861135..861380,863005..864441,867772..867841))
location: region:806598-867841:-1
so has part: feature:867772-867841:-1:exon
so has part: feature:863005-864441:-1:exon
so has part: feature:861135-861380:-1:exon
so has part: feature:859097-859207:-1:exon
so has part: feature:856084-856545:-1:exon
so has part: feature:854411-854522:-1:exon
so has part: feature:852175-852354:-1:exon
so has part: feature:851423-851491:-1:exon
so has part: feature:850009-850064:-1:exon
so has part: feature:849777-849894:-1:exon
so has part: feature:848909-848992:-1:exon
so has part: feature:848672-848809:-1:exon
so has part: feature:846314-846435:-1:exon
so has part: feature:845269-845553:-1:exon
so has part: feature:844805-844981:-1:exon
so has part: feature:841561-841704:-1:exon
so has part: feature:840581-840839:-1:exon
so has part: feature:833868-834078:-1:exon
so has part: feature:832034-832229:-1:exon
so has part: feature:831248-831415:-1:exon
so has part: feature:830701-830880:-1:exon
so has part: feature:826081-826191:-1:exon
so has part: feature:823552-823745:-1:exon
so has part: feature:822018-822217:-1:exon
so has part: feature:820776-820932:-1:exon
so has part: feature:818696-818785:-1:exon
so has part: feature:818311-818414:-1:exon
so has part: feature:818024-818153:-1:exon
so has part: feature:817651-817726:-1:exon
so has part: feature:817306-817357:-1:exon
so has part: feature:816882-817086:-1:exon
so has part: feature:816555-816763:-1:exon
so has part: feature:815226-815927:-1:exon
so has part: feature:814888-815021:-1:exon
so has part: feature:813983-814174:-1:exon
so has part: feature:813209-813310:-1:exon
so has part: feature:812558-812728:-1:exon
so has part: feature:811920-812039:-1:exon
so has part: feature:811158-811262:-1:exon
so has part: feature:806598-808455:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:867772-867841:-1:exon

position:867772:-1
position: 867772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:863005-864441:-1:exon

position:863005:-1
position: 863005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864441:-1
position: 864441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:861135-861380:-1:exon

position:861135:-1
position: 861135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861380:-1
position: 861380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:859097-859207:-1:exon

position:859097:-1
position: 859097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859207:-1
position: 859207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:856084-856545:-1:exon

position:856084:-1
position: 856084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856545:-1
position: 856545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:854411-854522:-1:exon

position:854411:-1
position: 854411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854522:-1
position: 854522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:852175-852354:-1:exon

position:852175:-1
position: 852175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852354:-1
position: 852354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:851423-851491:-1:exon

position:851423:-1
position: 851423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851491:-1
position: 851491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:850009-850064:-1:exon

position:850009:-1
position: 850009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850064:-1
position: 850064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:849777-849894:-1:exon

position:849777:-1
position: 849777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849894:-1
position: 849894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:848909-848992:-1:exon

position:848909:-1
position: 848909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848992:-1
position: 848992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:848672-848809:-1:exon

position:848672:-1
position: 848672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848809:-1
position: 848809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:846314-846435:-1:exon

position:846314:-1
position: 846314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846435:-1
position: 846435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:845269-845553:-1:exon

position:845269:-1
position: 845269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845553:-1
position: 845553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:844805-844981:-1:exon

position:844805:-1
position: 844805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844981:-1
position: 844981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:841561-841704:-1:exon

position:841561:-1
position: 841561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841704:-1
position: 841704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:840581-840839:-1:exon

position:840581:-1
position: 840581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840839:-1
position: 840839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:833868-834078:-1:exon

position:833868:-1
position: 833868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834078:-1
position: 834078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:832034-832229:-1:exon

position:832034:-1
position: 832034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832229:-1
position: 832229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:831248-831415:-1:exon

position:831248:-1
position: 831248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831415:-1
position: 831415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:830701-830880:-1:exon

position:830701:-1
position: 830701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830880:-1
position: 830880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:826081-826191:-1:exon

position:826081:-1
position: 826081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826191:-1
position: 826191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:823552-823745:-1:exon

position:823552:-1
position: 823552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823745:-1
position: 823745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:822018-822217:-1:exon

position:822018:-1
position: 822018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822217:-1
position: 822217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:820776-820932:-1:exon

position:820776:-1
position: 820776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820932:-1
position: 820932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:818696-818785:-1:exon

position:818696:-1
position: 818696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818785:-1
position: 818785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:818311-818414:-1:exon

position:818311:-1
position: 818311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818414:-1
position: 818414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:818024-818153:-1:exon

position:818024:-1
position: 818024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818153:-1
position: 818153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:817651-817726:-1:exon

position:817651:-1
position: 817651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817726:-1
position: 817726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:817306-817357:-1:exon

position:817306:-1
position: 817306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817357:-1
position: 817357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:816882-817086:-1:exon

position:816882:-1
position: 816882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817086:-1
position: 817086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:816555-816763:-1:exon

position:816555:-1
position: 816555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816763:-1
position: 816763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:815226-815927:-1:exon

position:815226:-1
position: 815226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815927:-1
position: 815927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:814888-815021:-1:exon

position:814888:-1
position: 814888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815021:-1
position: 815021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:813983-814174:-1:exon

position:813983:-1
position: 813983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814174:-1
position: 814174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:813209-813310:-1:exon

position:813209:-1
position: 813209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813310:-1
position: 813310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:812558-812728:-1:exon

position:812558:-1
position: 812558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812728:-1
position: 812728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:811920-812039:-1:exon

position:811920:-1
position: 811920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812039:-1
position: 812039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:811158-811262:-1:exon

position:811158:-1
position: 811158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811262:-1
position: 811262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:806598-808455:-1:exon

position:808455:-1
position: 808455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

chd8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: chd8
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 8
translation: MADPMMDLFDDPNLFNLDPLPDDTFTQSSSDPIDDALRLAFGHVATPPQHGAQASQPQQAVQTTQPYLSLHDYSGQKKQAVLQAPSATTAVAATTSKDPTLLGASVAVPVSTSTLTTVVRMPSAGLKTIAASSNQAHSQTVPKIVILKAPATSGAVTSQGQIHMVTTSSAGNNGGKVMLGKVLTGTPLRPGVSIVSGGTVLTTAAAGNAKGSLVNAGVGGAGVQRVVQTSNGPVKQVLLQTVQTQQQQLQPGQVQGSSATLKAPGITLTSIPQGESKRITLVLQQPQQGGSVSGLAGGQRFILGGLPGKIVLQGNQLAALTQARNSAQGGAGTGGQPKVVTIQLQVQQQPNCNTKLQLVSPSGGQQQVLQFSQGQVQGQRLAVPLKLLLQPQAGSSQGSVSVVKVSNMSEAQSSAGDQSPTPCPARGPETRRLEHQRKQEKANRIVAEAIARAKARGEQNIPRVLNQDELPTLAAGGAAAAGPGGEDGAGEEGAAGKKRSSKKKSAGAASGTGEGGXGKPAAKKSKSAGSSGGAGQGSKAKGKVKANTITPVAGKKRKRIGSSDNSDGELTPPTSPRGEEDESAKRRSNRQVKRRKYTEDLDIKITDDEEEEEDVDVTGPVKQEPITEPQAEGGDGVPTMQFFVEDPNEEDATIVDKILSMRLTKKEICQGQYTTVEEFFVKYKNYSYLHCEWASLEQLERDKRINQKLKRFKTKVAQMRHLFHEDEDPFNPDYVEVDRILDESHSVDKDNGEPVIYYLVKWCSLPYEDSTWELQEDVDQGKVEEFRKIQGRQPNLKRVPRPAASAWKKLELSREYKHGNCLREYQLEGVNWLLFNWYNKQNCILADEMGLGKTIQSISLLQEVYSAGLHGPFLIIAPLSTIANWEREFQTWTDMTMNTIVSTSTKCTARTTRCVCVASRQMIQQYEMYCKDDKGHLIPGAYKFEALITTFEMVLSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHLDLEHKVLLTGTPLQNTVEELFSLLNFLEPSQFPSETEFLKDFGDLKTEEQVQKLQALLKPMMLRRLKEDVEKKLVPKQETIIEVELTNIQKKYYRAILERNFSFLSKGPGQSNNVPNLLNTMMELRKCCNHPYLITGAEEKILSDLREVYDPLALDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYERDMFDKASLKLGLDKAVLQSMSGKENNANGIQQFSKKEIEDLLRKGAYAAVMDEEDEGSKFCEEDIDQILQRRATTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKADLDMDTINRKNTLVIDTPRVRKQTRQFSTLKDDDPVEFSDLDSEEERPRSRRHERHHGYGRTDCFRVEKHLLVYGWGRWQDILSHGRFKRRLSERDVETICRTVLVYCLLHYRGDENIKGFIWDLITPSESGQAKELQNHSGLSIPVPRGRKGKKVKAQSTFDVHKAEWIRQYNPDSLFMDDSYKKHLKHQCNKVLLRVRMLYYLKQEVIGDQAEKVLGGADARQIGIWFPEVDQLELPARWWDAEADKSLLIGVFKHGYEKYNTMRADPSLCFVERVGRPDEKAIETEQRGGDNFGDLGEGGDFDKYTEDPEYKPMQGMSKEQDEEGDSMMLDEEISVVDGDEGHMAQAGAVYWPAGSALTARLRRLITAYQRSYRREQLKMEAAEKGDRRRRRCEAAYKLKEIARRERQQRWTRREECDFYRVVSTFGVEFSPAHGHFDWRRFRSFARLDKKTDDSLVRYYHGFLAMCRRVCKLPQPPGQVPPDPSLSIALITEERASRTLYRIDLLRKIREQLLPHPSLDQLLASLAQPSPELPDWWQSPQHDKELLLGAAKHGVSRTDQSILPDPEYSFHQARLAYLQQHQLQSRSSTPL…
SIO_010081: chd8
subclass of: SO_0000673
so part of: chd8
location: complement(join(807997..808455,811158..811262,811920..812039,812558..812728,813209..813310,813983..814174,814888..815021,815226..815927,816555..816763,816882..817086,817306..817357,817651..817726,818024..818153,818311..818414,818696..818785,820776..820932,822018..822217,823552..823745,826081..826191,830701..830880,831248..831415,832034..832229,833868..834078,840581..840839,841561..841704,844805..844981,845269..845553,846314..846435,848672..848809,848909..848992,849777..849894,850009..850064,851423..851491,852175..852354,854411..854522,856084..856545,859097..859207,861135..861380,863005..863823))
location: region:807997-863823:-1
so has part: feature:863005-863823:-1:exon
so has part: feature:861135-861380:-1:exon
so has part: feature:859097-859207:-1:exon
so has part: feature:856084-856545:-1:exon
so has part: feature:854411-854522:-1:exon
so has part: feature:852175-852354:-1:exon
so has part: feature:851423-851491:-1:exon
so has part: feature:850009-850064:-1:exon
so has part: feature:849777-849894:-1:exon
so has part: feature:848909-848992:-1:exon
so has part: feature:848672-848809:-1:exon
so has part: feature:846314-846435:-1:exon
so has part: feature:845269-845553:-1:exon
so has part: feature:844805-844981:-1:exon
so has part: feature:841561-841704:-1:exon
so has part: feature:840581-840839:-1:exon
so has part: feature:833868-834078:-1:exon
so has part: feature:832034-832229:-1:exon
so has part: feature:831248-831415:-1:exon
so has part: feature:830701-830880:-1:exon
so has part: feature:826081-826191:-1:exon
so has part: feature:823552-823745:-1:exon
so has part: feature:822018-822217:-1:exon
so has part: feature:820776-820932:-1:exon
so has part: feature:818696-818785:-1:exon
so has part: feature:818311-818414:-1:exon
so has part: feature:818024-818153:-1:exon
so has part: feature:817651-817726:-1:exon
so has part: feature:817306-817357:-1:exon
so has part: feature:816882-817086:-1:exon
so has part: feature:816555-816763:-1:exon
so has part: feature:815226-815927:-1:exon
so has part: feature:814888-815021:-1:exon
so has part: feature:813983-814174:-1:exon
so has part: feature:813209-813310:-1:exon
so has part: feature:812558-812728:-1:exon
so has part: feature:811920-812039:-1:exon
so has part: feature:811158-811262:-1:exon
so has part: feature:807997-808455:-1:exon

XP_034770350.1
type: Protein
SIO_000068: ncbiprotein

position:807997:-1
position: 807997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863823:-1
position: 863823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863005-863823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:861135-861380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859097-859207:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:856084-856545:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:854411-854522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:852175-852354:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:851423-851491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:850009-850064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:849777-849894:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:848909-848992:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:848672-848809:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:846314-846435:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:845269-845553:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:844805-844981:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:841561-841704:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:840581-840839:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:833868-834078:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:832034-832229:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:831248-831415:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:830701-830880:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:826081-826191:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:823552-823745:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:822018-822217:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:820776-820932:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:818696-818785:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:818311-818414:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:818024-818153:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:817651-817726:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:817306-817357:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:816882-817086:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:816555-816763:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:815226-815927:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:814888-815021:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:813983-814174:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:813209-813310:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:812558-812728:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:811920-812039:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:811158-811262:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:807997-808455:-1:exon

LOC117398905
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(881370..899777)
location: region:881370-899777:-1
so has part: feature:881370-899777:-1:exon
subclass of: SO_0000010

117398905
type: Gene
SIO_000068: ncbigene

position:881370:-1
position: 881370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899777:-1
position: 899777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881370-899777:-1:exon

LOC117398905
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398905
product: ras-related protein Rab-2B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033998007.2
SIO_010081: LOC117398905
subclass of: SO_0000673
so part of: LOC117398905
location: complement(join(881370..882264,883454..883522,887236..887347,889621..889713,896284..896366,896992..897059,897252..897323,899535..899777))
location: region:881370-899777:-1
so has part: feature:899535-899777:-1:exon
so has part: feature:897252-897323:-1:exon
so has part: feature:896992-897059:-1:exon
so has part: feature:896284-896366:-1:exon
so has part: feature:889621-889713:-1:exon
so has part: feature:887236-887347:-1:exon
so has part: feature:883454-883522:-1:exon
so has part: feature:881370-882264:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:899535-899777:-1:exon

position:899535:-1
position: 899535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:897252-897323:-1:exon

position:897252:-1
position: 897252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897323:-1
position: 897323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:896992-897059:-1:exon

position:896992:-1
position: 896992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897059:-1
position: 897059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:896284-896366:-1:exon

position:896284:-1
position: 896284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896366:-1
position: 896366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:889621-889713:-1:exon

position:889621:-1
position: 889621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889713:-1
position: 889713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:887236-887347:-1:exon

position:887236:-1
position: 887236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887347:-1
position: 887347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:883454-883522:-1:exon

position:883454:-1
position: 883454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883522:-1
position: 883522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:881370-882264:-1:exon

position:882264:-1
position: 882264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-2B-like
translation: MSYLYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIDINGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHASSNMVIMLIGNKSDLELRRDVGREEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEVYHKIQHGLFDVNNEANGIKIGPQHSPSQMDRSGTYQKPSEAGGDSGCC
SIO_010081: LOC117398905
subclass of: SO_0000673
so part of: LOC117398905
location: complement(join(882160..882264,883454..883522,887236..887347,889621..889713,896284..896366,896992..897059,897252..897323,899535..899580))
location: region:882160-899580:-1
so has part: feature:899535-899580:-1:exon
so has part: feature:897252-897323:-1:exon
so has part: feature:896992-897059:-1:exon
so has part: feature:896284-896366:-1:exon
so has part: feature:889621-889713:-1:exon
so has part: feature:887236-887347:-1:exon
so has part: feature:883454-883522:-1:exon
so has part: feature:882160-882264:-1:exon

XP_033853898.2
type: Protein
SIO_000068: ncbiprotein

position:882160:-1
position: 882160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899580:-1
position: 899580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:899535-899580:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:897252-897323:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:896992-897059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:896284-896366:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889621-889713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:887236-887347:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:883454-883522:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:882160-882264:-1:exon

LOC117398852
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398852
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 906074..924032
location: region:906074-924032:1
so has part: feature:906074-924032:1:exon
subclass of: SO_0000010

117398852
type: Gene
SIO_000068: ncbigene

position:906074:1
position: 906074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924032:1
position: 924032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:906074-924032:1:exon

LOC117398852
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398852
product: TOX high mobility group box family member 4-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033997944.2
SIO_010081: LOC117398852
subclass of: SO_0000673
so part of: LOC117398852
location: join(906074..906573,910666..910734,912697..912954,913495..913758,914594..914884,915286..915366,918587..919459,920006..920142,923669..924032)
location: region:906074-924032:1
so has part: feature:906074-906573:1:exon
so has part: feature:910666-910734:1:exon
so has part: feature:912697-912954:1:exon
so has part: feature:913495-913758:1:exon
so has part: feature:914594-914884:1:exon
so has part: feature:915286-915366:1:exon
so has part: feature:918587-919459:1:exon
so has part: feature:920006-920142:1:exon
so has part: feature:923669-924032:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:906074-906573:1:exon

position:906573:1
position: 906573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:910666-910734:1:exon

position:910666:1
position: 910666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910734:1
position: 910734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:912697-912954:1:exon

position:912697:1
position: 912697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912954:1
position: 912954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:913495-913758:1:exon

position:913495:1
position: 913495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913758:1
position: 913758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:914594-914884:1:exon

position:914594:1
position: 914594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914884:1
position: 914884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:915286-915366:1:exon

position:915286:1
position: 915286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915366:1
position: 915366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:918587-919459:1:exon

position:918587:1
position: 918587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919459:1
position: 919459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:920006-920142:1:exon

position:920006:1
position: 920006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920142:1
position: 920142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:923669-924032:1:exon

position:923669:1
position: 923669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398852
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398852
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TOX high mobility group box family member 4-like isoform X3
translation: MEFPGGNDHYLTISGAGHPFLSSAETFQTFHTPSLGDEEFEIPPISLDPDPSLAVSDVVGHFDGLQDPALTAGGSAGADPVGYSTPFTSQGLEHLNIGGRGGELMGATLNMDMSHSLGSQYTSSSSMTINVPLSDLNHHSLMGHRQLTTIDQSELTSQLGLSLGGGTIMPRPQSPEELLSDTPSPSSSLHEEEAEEFKRLSEKRIVVESPVTMSPGLVGVSVGGGGSVVVRKTKPPKKTTKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRANQVSQTVMEVMDTEPPSTPPPPPTPPAAPKPTRPHTPSPSANTNTITNICTSNIILNHPQVITRSRTGAIVPPHPPLSSQSSPSQHTHTVTKIIISKQMLASGLHHQQIPTSMVTVIPSSRGLQIQQAAPTATPTSSPRPFLSQPPPLQQMQQPPPPRLQQMVHTSQQLPPPPLQAKPRGAGLTITTAPPPRLQIKILPALAPVSSSSSPLQIQAQPVATVVPSPITPPVLVSPSPPPPALIVGAVSASTASSSPTACLEVAQSVGGPLVSAVSASSSPLLGARVQEEAEDFNAGEMEVELVSGSPPPPSRCVRAGCTNTPVESQGWDHEYCSNQCVADHCRDIFIAWCSIRGHNTTATVK
SIO_010081: LOC117398852
subclass of: SO_0000673
so part of: LOC117398852
location: join(906568..906573,910666..910734,912697..912954,913495..913758,914594..914884,915286..915366,918587..919459,920006..920142,923669..923729)
location: region:906568-923729:1
so has part: feature:906568-906573:1:exon
so has part: feature:910666-910734:1:exon
so has part: feature:912697-912954:1:exon
so has part: feature:913495-913758:1:exon
so has part: feature:914594-914884:1:exon
so has part: feature:915286-915366:1:exon
so has part: feature:918587-919459:1:exon
so has part: feature:920006-920142:1:exon
so has part: feature:923669-923729:1:exon

XP_033853835.2
type: Protein
SIO_000068: ncbiprotein

position:906568:1
position: 906568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923729:1
position: 923729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:906568-906573:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:910666-910734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912697-912954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:913495-913758:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914594-914884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:915286-915366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:918587-919459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:920006-920142:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:923669-923729:1:exon

LOC117398852
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398852
product: TOX high mobility group box family member 4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033997943.2
SIO_010081: LOC117398852
subclass of: SO_0000673
so part of: LOC117398852
location: join(908614..909057,910666..910734,912697..912954,913495..913758,914594..914884,915286..915366,918587..919459,920006..920142,923669..924032)
location: region:908614-924032:1
so has part: feature:908614-909057:1:exon
so has part: feature:910666-910734:1:exon
so has part: feature:912697-912954:1:exon
so has part: feature:913495-913758:1:exon
so has part: feature:914594-914884:1:exon
so has part: feature:915286-915366:1:exon
so has part: feature:918587-919459:1:exon
so has part: feature:920006-920142:1:exon
so has part: feature:923669-924032:1:exon

position:908614:1
position: 908614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:908614-909057:1:exon

position:909057:1
position: 909057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:910666-910734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912697-912954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:913495-913758:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914594-914884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:915286-915366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:918587-919459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:920006-920142:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:923669-924032:1:exon

LOC117398852
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398852
product: TOX high mobility group box family member 4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034914464.1
SIO_010081: LOC117398852
subclass of: SO_0000673
so part of: LOC117398852
location: join(908614..909057,910666..910734,912706..912954,913495..913758,914594..914884,915286..915366,918587..919459,920006..920142,923669..924032)
location: region:908614-924032:1
so has part: feature:908614-909057:1:exon
so has part: feature:910666-910734:1:exon
so has part: feature:912706-912954:1:exon
so has part: feature:913495-913758:1:exon
so has part: feature:914594-914884:1:exon
so has part: feature:915286-915366:1:exon
so has part: feature:918587-919459:1:exon
so has part: feature:920006-920142:1:exon
so has part: feature:923669-924032:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:908614-909057:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:910666-910734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912706-912954:1:exon

position:912706:1
position: 912706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:913495-913758:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914594-914884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:915286-915366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:918587-919459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:920006-920142:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:923669-924032:1:exon

LOC117398852
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398852
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TOX high mobility group box family member 4-like isoform X1
translation: MDLHFYSGFSDASIQSNEQQFLDNSQNYNSYSTINKFPGGNDHYLTISGAGHPFLSSAETFQTFHTPSLGDEEFEIPPISLDPDPSLAVSDVVGHFDGLQDPALTAGGSAGADPVGYSTPFTSQGLEHLNIGGRGGELMGATLNMDMSHSLGSQYTSSSSMTINVPLSDLNHHSLMGHRQLTTIDQSELTSQLGLSLGGGTIMPRPQSPEELLSDTPSPSSSLHEEEAEEFKRLSEKRIVVESPVTMSPGLVGVSVGGGGSVVVRKTKPPKKTTKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRANQVSQTVMEVMDTEPPSTPPPPPTPPAAPKPTRPHTPSPSANTNTITNICTSNIILNHPQVITRSRTGAIVPPHPPLSSQSSPSQHTHTVTKIIISKQMLASGLHHQQIPTSMVTVIPSSRGLQIQQAAPTATPTSSPRPFLSQPPPLQQMQQPPPPRLQQMVHTSQQLPPPPLQAKPRGAGLTITTAPPPRLQIKILPALAPVSSSSSPLQIQAQPVATVVPSPITPPVLVSPSPPPPALIVGAVSASTASSSPTACLEVAQSVGGPLVSAVSASSSPLLGARVQEEAEDFNAGEMEVELVSGSPPPPSRCVRAGCTNTPVESQGWDHEYCSNQCVADHCRDIFIAWCSIRGHNTTATVK
SIO_010081: LOC117398852
subclass of: SO_0000673
so part of: LOC117398852
location: join(908950..909057,910666..910734,912697..912954,913495..913758,914594..914884,915286..915366,918587..919459,920006..920142,923669..923729)
location: region:908950-923729:1
so has part: feature:908950-909057:1:exon
so has part: feature:910666-910734:1:exon
so has part: feature:912697-912954:1:exon
so has part: feature:913495-913758:1:exon
so has part: feature:914594-914884:1:exon
so has part: feature:915286-915366:1:exon
so has part: feature:918587-919459:1:exon
so has part: feature:920006-920142:1:exon
so has part: feature:923669-923729:1:exon

XP_033853834.2
type: Protein
SIO_000068: ncbiprotein

position:908950:1
position: 908950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:908950-909057:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:910666-910734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912697-912954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:913495-913758:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914594-914884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:915286-915366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:918587-919459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:920006-920142:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:923669-923729:1:exon

LOC117398852
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398852
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TOX high mobility group box family member 4-like isoform X2
translation: MDLHFYSGFSDASIQSNEQQFLDNSQNYNSYSTINKFPGGNDHYLTISGAGHPFLSSAETFHTPSLGDEEFEIPPISLDPDPSLAVSDVVGHFDGLQDPALTAGGSAGADPVGYSTPFTSQGLEHLNIGGRGGELMGATLNMDMSHSLGSQYTSSSSMTINVPLSDLNHHSLMGHRQLTTIDQSELTSQLGLSLGGGTIMPRPQSPEELLSDTPSPSSSLHEEEAEEFKRLSEKRIVVESPVTMSPGLVGVSVGGGGSVVVRKTKPPKKTTKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRANQVSQTVMEVMDTEPPSTPPPPPTPPAAPKPTRPHTPSPSANTNTITNICTSNIILNHPQVITRSRTGAIVPPHPPLSSQSSPSQHTHTVTKIIISKQMLASGLHHQQIPTSMVTVIPSSRGLQIQQAAPTATPTSSPRPFLSQPPPLQQMQQPPPPRLQQMVHTSQQLPPPPLQAKPRGAGLTITTAPPPRLQIKILPALAPVSSSSSPLQIQAQPVATVVPSPITPPVLVSPSPPPPALIVGAVSASTASSSPTACLEVAQSVGGPLVSAVSASSSPLLGARVQEEAEDFNAGEMEVELVSGSPPPPSRCVRAGCTNTPVESQGWDHEYCSNQCVADHCRDIFIAWCSIRGHNTTATVK
SIO_010081: LOC117398852
subclass of: SO_0000673
so part of: LOC117398852
location: join(908950..909057,910666..910734,912706..912954,913495..913758,914594..914884,915286..915366,918587..919459,920006..920142,923669..923729)
location: region:908950-923729:1
so has part: feature:908950-909057:1:exon
so has part: feature:910666-910734:1:exon
so has part: feature:912706-912954:1:exon
so has part: feature:913495-913758:1:exon
so has part: feature:914594-914884:1:exon
so has part: feature:915286-915366:1:exon
so has part: feature:918587-919459:1:exon
so has part: feature:920006-920142:1:exon
so has part: feature:923669-923729:1:exon

XP_034770355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:908950-909057:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:910666-910734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912706-912954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:913495-913758:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914594-914884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:915286-915366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:918587-919459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:920006-920142:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:923669-923729:1:exon

supt16h
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: supt16h
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 927765..965970
location: region:927765-965970:1
so has part: feature:927765-965970:1:exon
subclass of: SO_0000010

117398842
type: Gene
SIO_000068: ncbigene

position:927765:1
position: 927765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965970:1
position: 965970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927765-965970:1:exon

supt16h
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: supt16h
product: SPT16 homolog, facilitates chromatin remodeling subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033997932.2
SIO_010081: supt16h
subclass of: SO_0000673
so part of: supt16h
location: join(927765..928235,930112..930201,931157..931327,935387..935539,935912..936058,936390..936541,937431..937603,937844..937934,939124..939197,943660..943772,947459..947524,947742..947831,950994..951109,951299..951452,952446..952573,953298..953560,954003..954121,954779..954904,955398..955510,957142..957217,957526..957695,959022..959151,959516..959645,960043..960117,964895..965970)
location: region:927765-965970:1
so has part: feature:927765-928235:1:exon
so has part: feature:930112-930201:1:exon
so has part: feature:931157-931327:1:exon
so has part: feature:935387-935539:1:exon
so has part: feature:935912-936058:1:exon
so has part: feature:936390-936541:1:exon
so has part: feature:937431-937603:1:exon
so has part: feature:937844-937934:1:exon
so has part: feature:939124-939197:1:exon
so has part: feature:943660-943772:1:exon
so has part: feature:947459-947524:1:exon
so has part: feature:947742-947831:1:exon
so has part: feature:950994-951109:1:exon
so has part: feature:951299-951452:1:exon
so has part: feature:952446-952573:1:exon
so has part: feature:953298-953560:1:exon
so has part: feature:954003-954121:1:exon
so has part: feature:954779-954904:1:exon
so has part: feature:955398-955510:1:exon
so has part: feature:957142-957217:1:exon
so has part: feature:957526-957695:1:exon
so has part: feature:959022-959151:1:exon
so has part: feature:959516-959645:1:exon
so has part: feature:960043-960117:1:exon
so has part: feature:964895-965970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:927765-928235:1:exon

position:928235:1
position: 928235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:930112-930201:1:exon

position:930112:1
position: 930112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930201:1
position: 930201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:931157-931327:1:exon

position:931157:1
position: 931157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:931327:1
position: 931327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:935387-935539:1:exon

position:935387:1
position: 935387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935539:1
position: 935539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:935912-936058:1:exon

position:935912:1
position: 935912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936058:1
position: 936058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:936390-936541:1:exon

position:936390:1
position: 936390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936541:1
position: 936541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:937431-937603:1:exon

position:937431:1
position: 937431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937603:1
position: 937603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:937844-937934:1:exon

position:937844:1
position: 937844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937934:1
position: 937934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:939124-939197:1:exon

position:939124:1
position: 939124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939197:1
position: 939197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:943660-943772:1:exon

position:943660:1
position: 943660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943772:1
position: 943772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:947459-947524:1:exon

position:947459:1
position: 947459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947524:1
position: 947524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:947742-947831:1:exon

position:947742:1
position: 947742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947831:1
position: 947831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:950994-951109:1:exon

position:950994:1
position: 950994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951109:1
position: 951109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:951299-951452:1:exon

position:951299:1
position: 951299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951452:1
position: 951452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:952446-952573:1:exon

position:952446:1
position: 952446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952573:1
position: 952573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:953298-953560:1:exon

position:953298:1
position: 953298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953560:1
position: 953560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:954003-954121:1:exon

position:954003:1
position: 954003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954121:1
position: 954121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:954779-954904:1:exon

position:954779:1
position: 954779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954904:1
position: 954904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:955398-955510:1:exon

position:955398:1
position: 955398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955510:1
position: 955510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:957142-957217:1:exon

position:957142:1
position: 957142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957217:1
position: 957217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:957526-957695:1:exon

position:957526:1
position: 957526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957695:1
position: 957695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:959022-959151:1:exon

position:959022:1
position: 959022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959151:1
position: 959151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:959516-959645:1:exon

position:959516:1
position: 959516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959645:1
position: 959645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:960043-960117:1:exon

position:960043:1
position: 960043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960117:1
position: 960117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:964895-965970:1:exon

position:964895:1
position: 964895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

supt16h
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: supt16h
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FACT complex subunit SPT16
translation: MAVNLDKEAYYRRIKRLYSNWKKEDEFGKVDALVVSVGVDEEIVYAKSTALQTWLFGYELTDTIMIFCESKIVFMASKKKVEFLKQIANTKGSENANGVPPITLLIREKNESNKGNFDKMVEAIKGSKEGKTIGVFSKDKFPGDFMKSWNDALNKEGLEKVDISAAVAYTIAVKEDGELGFMKKAASITSEVFNKFFKERVMEIVDADEKVRHSKLAESVEKAIEEKKYLAGADPSTVEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGAITCAMGIRYKSYCSNLVRTLMVDPPQDMQDNYSFLLQVEEELLKELQHGVKLCDVYSAVMEFVKKEKPDLLGKLTKNLGFAMGIEFREGSLVLNSKNQYKVKKGMVFSINLGLSELLNKEGKKEEQKKYALFIGDSVQVNEEGPATVLTPVKKKIKNVGIFLKNEDDDEDEEQDKAEDLLGKPRAALLTERTRNEMTAEEKRRAHQRELANHVNEEARRRLTEQKGEQQMQKTRKSNVSYKNPSQMPKEKEIREMKIFIDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYTYLRINFYCPGSALGRNEGNLFPNPEATFVKEITYRASNLKTPGDPSVPATNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVVHMNRSNPKLKDLYIRPNIAQKRMQGSLEAHSNGFRFTSVRGDKVDILYNNIKHSLFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHMHDRDDLYAEQMEREMRHKLKTAFKNFIEKVEALTKEELEFELPFRDLGFSGAPYRSTCLLQPTSSALCNVTEWPPFVVTLDEVELIHFERVQFHLKNFDVVIVYKDYSKKVTMINAVPVNSLDPIKEWLNSCDIKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSFLDPEGEGSGAENQDSESEVEDETFNPSDEEEEEEEEDSDEDYDSETEDSNYSESLASDEESGKDWDELEEEARKADRESRYEEVVEEPASRKRKGHSAPSSSSKKRKK
SIO_010081: supt16h
subclass of: SO_0000673
so part of: supt16h
location: join(928170..928235,930112..930201,931157..931327,935387..935539,935912..936058,936390..936541,937431..937603,937844..937934,939124..939197,943660..943772,947459..947524,947742..947831,950994..951109,951299..951452,952446..952573,953298..953560,954003..954121,954779..954904,955398..955510,957142..957217,957526..957695,959022..959151,959516..959645,960043..960117,964895..964998)
location: region:928170-964998:1
so has part: feature:928170-928235:1:exon
so has part: feature:930112-930201:1:exon
so has part: feature:931157-931327:1:exon
so has part: feature:935387-935539:1:exon
so has part: feature:935912-936058:1:exon
so has part: feature:936390-936541:1:exon
so has part: feature:937431-937603:1:exon
so has part: feature:937844-937934:1:exon
so has part: feature:939124-939197:1:exon
so has part: feature:943660-943772:1:exon
so has part: feature:947459-947524:1:exon
so has part: feature:947742-947831:1:exon
so has part: feature:950994-951109:1:exon
so has part: feature:951299-951452:1:exon
so has part: feature:952446-952573:1:exon
so has part: feature:953298-953560:1:exon
so has part: feature:954003-954121:1:exon
so has part: feature:954779-954904:1:exon
so has part: feature:955398-955510:1:exon
so has part: feature:957142-957217:1:exon
so has part: feature:957526-957695:1:exon
so has part: feature:959022-959151:1:exon
so has part: feature:959516-959645:1:exon
so has part: feature:960043-960117:1:exon
so has part: feature:964895-964998:1:exon

XP_033853823.1
type: Protein
SIO_000068: ncbiprotein

position:928170:1
position: 928170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964998:1
position: 964998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928170-928235:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:930112-930201:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931157-931327:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935387-935539:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:935912-936058:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:936390-936541:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:937431-937603:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:937844-937934:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:939124-939197:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:943660-943772:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:947459-947524:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:947742-947831:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:950994-951109:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:951299-951452:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:952446-952573:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:953298-953560:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:954003-954121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:954779-954904:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:955398-955510:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:957142-957217:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:957526-957695:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:959022-959151:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:959516-959645:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:960043-960117:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:964895-964998:1:exon

LOC117399094
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117399094
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 934240..934351
location: region:934240-934351:1
so has part: feature:934240-934351:1:exon
subclass of: SO_0000578

117399094
type: Gene
SIO_000068: ncbigene

position:934240:1
position: 934240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934351:1
position: 934351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934240-934351:1:exon

LOC117399094
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snoRNA
gene: LOC117399094
product: small nucleolar RNA U6-53/MBII-28
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00377
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004544014.1
SIO_010081: LOC117399094
subclass of: SO_0000673
so part of: LOC117399094
location: 934240..934351
location: region:934240-934351:1
so has part: feature:934240-934351:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:934240-934351:1:exon

LOC117399096
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117399096
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 935713..935827
location: region:935713-935827:1
so has part: feature:935713-935827:1:exon
subclass of: SO_0000578

117399096
type: Gene
SIO_000068: ncbigene

position:935713:1
position: 935713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935827:1
position: 935827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:935713-935827:1:exon

LOC117399096
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snoRNA
gene: LOC117399096
product: small nucleolar RNA U6-53/MBII-28
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00377
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004544016.2
SIO_010081: LOC117399096
subclass of: SO_0000673
so part of: LOC117399096
location: 935713..935827
location: region:935713-935827:1
so has part: feature:935713-935827:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:935713-935827:1:exon

LOC117399095
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117399095
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 936978..937093
location: region:936978-937093:1
so has part: feature:936978-937093:1:exon
subclass of: SO_0000578

117399095
type: Gene
SIO_000068: ncbigene

position:936978:1
position: 936978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937093:1
position: 937093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:936978-937093:1:exon

LOC117399095
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snoRNA
gene: LOC117399095
product: small nucleolar RNA U6-53/MBII-28
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00377
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004544015.1
SIO_010081: LOC117399095
subclass of: SO_0000673
so part of: LOC117399095
location: 936978..937093
location: region:936978-937093:1
so has part: feature:936978-937093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:936978-937093:1:exon

LOC117398982
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(978118..983232)
location: region:978118-983232:-1
so has part: feature:978118-983232:-1:exon
subclass of: SO_0000010

117398982
type: Gene
SIO_000068: ncbigene

position:978118:-1
position: 978118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983232:-1
position: 983232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978118-983232:-1:exon

LOC117398982
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398982
product: G-protein coupled receptor 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 27% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914421.1
SIO_010081: LOC117398982
subclass of: SO_0000673
so part of: LOC117398982
location: complement(join(978118..978252,982337..982527,982693..983232))
location: region:978118-983232:-1
so has part: feature:982693-983232:-1:exon
so has part: feature:982337-982527:-1:exon
so has part: feature:978118-978252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:982693-983232:-1:exon

position:982693:-1
position: 982693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:982337-982527:-1:exon

position:982337:-1
position: 982337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982527:-1
position: 982527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:978118-978252:-1:exon

position:978252:-1
position: 978252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398982
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 4-like
translation: MMNNISSDSCDNIDFSSDQTFLSVLYGLVFCIGLPANCLALYGLYRLVKTDNALPVYVINLLLSDLLQISTLPLWIDYYSHGHVWRYDRTACVFVCVISNISLYSSIFFLCCISLERYLAIAHPLWYRNLHPHKLAAVTCVVFVHRRTRMSLADSLSVSAEEKERISRLLALVVIIFILVFGPHHLIVFVKCIGLIVLVENCGFELDASVLRPRRRSRAKQPDCNVDFPPVHVLQEGIACAQVPRHPRN
SIO_010081: LOC117398982
subclass of: SO_0000673
so part of: LOC117398982
location: complement(join(978118..978252,982337..982527,982693..983116))
location: region:978118-983116:-1
so has part: feature:982693-983116:-1:exon
so has part: feature:982337-982527:-1:exon
so has part: feature:978118-978252:-1:exon

XP_034770312.1
type: Protein
SIO_000068: ncbiprotein

position:983116:-1
position: 983116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982693-983116:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:982337-982527:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:978118-978252:-1:exon

zgc:171579
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: zgc:171579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 997109..1005436
location: region:997109-1005436:1
so has part: feature:997109-1005436:1:exon
subclass of: SO_0000010

117398894
type: Gene
SIO_000068: ncbigene

position:997109:1
position: 997109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1005436:1
position: 1005436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997109-1005436:1:exon

zgc:171579
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: zgc:171579
product: uncharacterized protein LOC557116 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033997994.2
SIO_010081: zgc:171579
subclass of: SO_0000673
so part of: zgc:171579
location: join(997109..997145,1004084..1005436)
location: region:997109-1005436:1
so has part: feature:997109-997145:1:exon
so has part: feature:1004084-1005436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:997109-997145:1:exon

position:997145:1
position: 997145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1004084-1005436:1:exon

position:1004084:1
position: 1004084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

zgc:171579
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: zgc:171579
product: uncharacterized protein LOC557116 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033997993.2
SIO_010081: zgc:171579
subclass of: SO_0000673
so part of: zgc:171579
location: join(997941..997979,1004084..1005436)
location: region:997941-1005436:1
so has part: feature:997941-997979:1:exon
so has part: feature:1004084-1005436:1:exon

position:997941:1
position: 997941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997941-997979:1:exon

position:997979:1
position: 997979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1004084-1005436:1:exon

zgc:171579
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: zgc:171579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 4
translation: MMNNSSSDSCDNIDFSSDQTFLSVLYGLVFCIGLPANCLALYRLYHLVKTDNALPVYVINLLLSDLLQISTLPLWIDYYSHGHMWRFGGTSCQVVGSIFYISLYVSIFFMCCIALERYLAIVHPLVFQSIRGLRFACLLSVGLWVLVTVPPCVAFAVLFKKENSGNFCIEKYPSDHNFITYRLITLVLSFFLPLTFLVFMHARTQRTLSDVLLLPEEEKKRIKGLLTLVLLIFMVVFGPYHLIGCIKYIGLIGHTNMCIFEAKIFIYYQLGRGMLSLNSLLDPIMYIFLRKDVRKHMLHSFPFLQRVARLMDCHTSRASRQTESSVASYCVSQV
SIO_010081: zgc:171579
subclass of: SO_0000673
so part of: zgc:171579
location: 1004163..1005167
location: region:1004163-1005167:1
so has part: feature:1004163-1005167:1:exon

XP_033853884.1
type: Protein
SIO_000068: ncbiprotein

position:1004163:1
position: 1004163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1005167:1
position: 1005167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004163-1005167:1:exon

zgc:171579
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: zgc:171579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 4
translation: MMNNSSSDSCDNIDFSSDQTFLSVLYGLVFCIGLPANCLALYRLYHLVKTDNALPVYVINLLLSDLLQISTLPLWIDYYSHGHMWRFGGTSCQVVGSIFYISLYVSIFFMCCIALERYLAIVHPLVFQSIRGLRFACLLSVGLWVLVTVPPCVAFAVLFKKENSGNFCIEKYPSDHNFITYRLITLVLSFFLPLTFLVFMHARTQRTLSDVLLLPEEEKKRIKGLLTLVLLIFMVVFGPYHLIGCIKYIGLIGHTNMCIFEAKIFIYYQLGRGMLSLNSLLDPIMYIFLRKDVRKHMLHSFPFLQRVARLMDCHTSRASRQTESSVASYCVSQV
SIO_010081: zgc:171579
subclass of: SO_0000673
so part of: zgc:171579
location: 1004163..1005167
location: region:1004163-1005167:1
so has part: feature:1004163-1005167:1:exon

XP_033853885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1004163-1005167:1:exon

lpcat4
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: lpcat4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1026103..1039474
location: region:1026103-1039474:1
so has part: feature:1026103-1039474:1:exon
subclass of: SO_0000010

117398862
type: Gene
SIO_000068: ncbigene

position:1026103:1
position: 1026103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039474:1
position: 1039474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026103-1039474:1:exon

lpcat4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: lpcat4
product: lysophosphatidylcholine acyltransferase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033997954.2
SIO_010081: lpcat4
subclass of: SO_0000673
so part of: lpcat4
location: join(1026103..1027066,1027461..1027603,1028264..1028484,1029061..1029173,1030537..1030597,1030784..1030842,1031416..1031450,1031685..1031739,1031909..1031991,1032160..1032285,1033301..1033457,1033744..1033842,1034623..1034764,1037281..1039474)
location: region:1026103-1039474:1
so has part: feature:1026103-1027066:1:exon
so has part: feature:1027461-1027603:1:exon
so has part: feature:1028264-1028484:1:exon
so has part: feature:1029061-1029173:1:exon
so has part: feature:1030537-1030597:1:exon
so has part: feature:1030784-1030842:1:exon
so has part: feature:1031416-1031450:1:exon
so has part: feature:1031685-1031739:1:exon
so has part: feature:1031909-1031991:1:exon
so has part: feature:1032160-1032285:1:exon
so has part: feature:1033301-1033457:1:exon
so has part: feature:1033744-1033842:1:exon
so has part: feature:1034623-1034764:1:exon
so has part: feature:1037281-1039474:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1026103-1027066:1:exon

position:1027066:1
position: 1027066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1027461-1027603:1:exon

position:1027461:1
position: 1027461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027603:1
position: 1027603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1028264-1028484:1:exon

position:1028264:1
position: 1028264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028484:1
position: 1028484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1029061-1029173:1:exon

position:1029061:1
position: 1029061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029173:1
position: 1029173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1030537-1030597:1:exon

position:1030537:1
position: 1030537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030597:1
position: 1030597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1030784-1030842:1:exon

position:1030784:1
position: 1030784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030842:1
position: 1030842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1031416-1031450:1:exon

position:1031416:1
position: 1031416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031450:1
position: 1031450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1031685-1031739:1:exon

position:1031685:1
position: 1031685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031739:1
position: 1031739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1031909-1031991:1:exon

position:1031909:1
position: 1031909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031991:1
position: 1031991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1032160-1032285:1:exon

position:1032160:1
position: 1032160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032285:1
position: 1032285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1033301-1033457:1:exon

position:1033301:1
position: 1033301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033457:1
position: 1033457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1033744-1033842:1:exon

position:1033744:1
position: 1033744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033842:1
position: 1033842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1034623-1034764:1:exon

position:1034623:1
position: 1034623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034764:1
position: 1034764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1037281-1039474:1:exon

position:1037281:1
position: 1037281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

lpcat4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: lpcat4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysophospholipid acyltransferase LPCAT4
translation: METSKLSRLEYKKGKDVIETVNGNPFVHEVTLTNRQKVKVALLGTILFPVRMLLTVIIFLILWPISRLRFLGLSKEQVSQPITGWRWWFLQALAWTLCRVLFFVMGFMRVKVRGRMAPPTEAPILVVAPHSSFLDSIVMVPCGLVTVMSRAENLTIPIVGDLLRFNQSIVVSRQDPESRRSCVEELKKRVSASGQWSQVLIFPEGTTTNGTALIKFKAGAFIVGVPVQPVIIRYPNKLDTIRWTWKGINIVQVLWYTLSQFYTSAEIEFLPVYTPTQEEKDNPALFASNVQKTMARALGVPATEYEFEGRVPVTRVGLLKLPVQPGARVTEKRLQKTGTGMQAVLNRMGGLVEECCRLPAHRLTLEQCAKLLNLPASQPDTHALLTPYCQGSDGLLDLREFVLGMLAVDKTWSIERVLELAFTFFDTGSKGWLSKGEFSRLLQALLSCPELDVAQIIEETNLRDKYELPLEELQDLFKSKQNFKSLFTCYLRPEGEEPAKTTPFANGRGHASNGVGLAGKATSNGTASSNKKWD
SIO_010081: lpcat4
subclass of: SO_0000673
so part of: lpcat4
location: join(1026950..1027066,1027461..1027603,1028264..1028484,1029061..1029173,1030537..1030597,1030784..1030842,1031416..1031450,1031685..1031739,1031909..1031991,1032160..1032285,1033301..1033457,1033744..1033842,1034623..1034764,1037281..1037474)
location: region:1026950-1037474:1
so has part: feature:1026950-1027066:1:exon
so has part: feature:1027461-1027603:1:exon
so has part: feature:1028264-1028484:1:exon
so has part: feature:1029061-1029173:1:exon
so has part: feature:1030537-1030597:1:exon
so has part: feature:1030784-1030842:1:exon
so has part: feature:1031416-1031450:1:exon
so has part: feature:1031685-1031739:1:exon
so has part: feature:1031909-1031991:1:exon
so has part: feature:1032160-1032285:1:exon
so has part: feature:1033301-1033457:1:exon
so has part: feature:1033744-1033842:1:exon
so has part: feature:1034623-1034764:1:exon
so has part: feature:1037281-1037474:1:exon

XP_033853845.2
type: Protein
SIO_000068: ncbiprotein

position:1026950:1
position: 1026950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037474:1
position: 1037474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026950-1027066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1027461-1027603:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1028264-1028484:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1029061-1029173:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1030537-1030597:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1030784-1030842:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1031416-1031450:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1031685-1031739:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1031909-1031991:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1032160-1032285:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1033301-1033457:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1033744-1033842:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1034623-1034764:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1037281-1037474:1:exon

nop10
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: nop10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1050920..1052765
location: region:1050920-1052765:1
so has part: feature:1050920-1052765:1:exon
subclass of: SO_0000010

117398947
type: Gene
SIO_000068: ncbigene

position:1050920:1
position: 1050920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1052765:1
position: 1052765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1050920-1052765:1:exon

nop10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: nop10
product: NOP10 ribonucleoprotein homolog (yeast)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033998046.2
SIO_010081: nop10
subclass of: SO_0000673
so part of: nop10
location: join(1050920..1051083,1052088..1052765)
location: region:1050920-1052765:1
so has part: feature:1050920-1051083:1:exon
so has part: feature:1052088-1052765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1050920-1051083:1:exon

position:1051083:1
position: 1051083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1052088-1052765:1:exon

position:1052088:1
position: 1052088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nop10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: nop10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: H/ACA ribonucleoprotein complex subunit 3
translation: MFLQFYLNENGERVYTLQKVSPDGKPTSSAHPARFSPDDQYSRHRVTLKKRFGVLMTQKPRPVL
SIO_010081: nop10
subclass of: SO_0000673
so part of: nop10
location: join(1051030..1051083,1052088..1052228)
location: region:1051030-1052228:1
so has part: feature:1051030-1051083:1:exon
so has part: feature:1052088-1052228:1:exon

XP_033853937.1
type: Protein
SIO_000068: ncbiprotein

position:1051030:1
position: 1051030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1052228:1
position: 1052228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051030-1051083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1052088-1052228:1:exon

LOC117399097
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117399097
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1051730..1051846
location: region:1051730-1051846:1
so has part: feature:1051730-1051846:1:exon
subclass of: SO_0000578

117399097
type: Gene
SIO_000068: ncbigene

position:1051730:1
position: 1051730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1051846:1
position: 1051846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051730-1051846:1:exon

LOC117399097
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snoRNA
gene: LOC117399097
product: small nucleolar RNA U6-53/MBII-28
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00377
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004544017.1
SIO_010081: LOC117399097
subclass of: SO_0000673
so part of: LOC117399097
location: 1051730..1051846
location: region:1051730-1051846:1
so has part: feature:1051730-1051846:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1051730-1051846:1:exon

LOC117398837
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1057510..1103654
location: region:1057510-1103654:1
so has part: feature:1057510-1103654:1:exon
subclass of: SO_0000010

117398837
type: Gene
SIO_000068: ncbigene

position:1057510:1
position: 1057510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103654:1
position: 1103654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057510-1103654:1:exon

LOC117398837
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398837
product: solute carrier family 12 member 6-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033997923.2
SIO_010081: LOC117398837
subclass of: SO_0000673
so part of: LOC117398837
location: join(1057510..1059260,1067153..1067247,1068227..1068358,1068773..1068919,1069821..1069875,1070483..1070613,1071527..1071768,1075659..1075900,1076366..1076530,1080072..1080170,1080428..1080485,1081600..1081774,1082216..1082334,1083018..1083116,1083840..1083959,1084228..1084332,1087831..1087999,1088239..1088434,1089983..1090152,1090270..1090401,1090783..1090890,1094156..1094239,1101454..1101668,1102887..1103020,1103328..1103654)
location: region:1057510-1103654:1
so has part: feature:1057510-1059260:1:exon
so has part: feature:1067153-1067247:1:exon
so has part: feature:1068227-1068358:1:exon
so has part: feature:1068773-1068919:1:exon
so has part: feature:1069821-1069875:1:exon
so has part: feature:1070483-1070613:1:exon
so has part: feature:1071527-1071768:1:exon
so has part: feature:1075659-1075900:1:exon
so has part: feature:1076366-1076530:1:exon
so has part: feature:1080072-1080170:1:exon
so has part: feature:1080428-1080485:1:exon
so has part: feature:1081600-1081774:1:exon
so has part: feature:1082216-1082334:1:exon
so has part: feature:1083018-1083116:1:exon
so has part: feature:1083840-1083959:1:exon
so has part: feature:1084228-1084332:1:exon
so has part: feature:1087831-1087999:1:exon
so has part: feature:1088239-1088434:1:exon
so has part: feature:1089983-1090152:1:exon
so has part: feature:1090270-1090401:1:exon
so has part: feature:1090783-1090890:1:exon
so has part: feature:1094156-1094239:1:exon
so has part: feature:1101454-1101668:1:exon
so has part: feature:1102887-1103020:1:exon
so has part: feature:1103328-1103654:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1057510-1059260:1:exon

position:1059260:1
position: 1059260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1067153-1067247:1:exon

position:1067153:1
position: 1067153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067247:1
position: 1067247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1068227-1068358:1:exon

position:1068227:1
position: 1068227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068358:1
position: 1068358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1068773-1068919:1:exon

position:1068773:1
position: 1068773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068919:1
position: 1068919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1069821-1069875:1:exon

position:1069821:1
position: 1069821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069875:1
position: 1069875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1070483-1070613:1:exon

position:1070483:1
position: 1070483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070613:1
position: 1070613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1071527-1071768:1:exon

position:1071527:1
position: 1071527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071768:1
position: 1071768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1075659-1075900:1:exon

position:1075659:1
position: 1075659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075900:1
position: 1075900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1076366-1076530:1:exon

position:1076366:1
position: 1076366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076530:1
position: 1076530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1080072-1080170:1:exon

position:1080072:1
position: 1080072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080170:1
position: 1080170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1080428-1080485:1:exon

position:1080428:1
position: 1080428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080485:1
position: 1080485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1081600-1081774:1:exon

position:1081600:1
position: 1081600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081774:1
position: 1081774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1082216-1082334:1:exon

position:1082216:1
position: 1082216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082334:1
position: 1082334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1083018-1083116:1:exon

position:1083018:1
position: 1083018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083116:1
position: 1083116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1083840-1083959:1:exon

position:1083840:1
position: 1083840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083959:1
position: 1083959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1084228-1084332:1:exon

position:1084228:1
position: 1084228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084332:1
position: 1084332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1087831-1087999:1:exon

position:1087831:1
position: 1087831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087999:1
position: 1087999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1088239-1088434:1:exon

position:1088239:1
position: 1088239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088434:1
position: 1088434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1089983-1090152:1:exon

position:1089983:1
position: 1089983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090152:1
position: 1090152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1090270-1090401:1:exon

position:1090270:1
position: 1090270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090401:1
position: 1090401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1090783-1090890:1:exon

position:1090783:1
position: 1090783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090890:1
position: 1090890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1094156-1094239:1:exon

position:1094156:1
position: 1094156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094239:1
position: 1094239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1101454-1101668:1:exon

position:1101454:1
position: 1101454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101668:1
position: 1101668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1102887-1103020:1:exon

position:1102887:1
position: 1102887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103020:1
position: 1103020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1103328-1103654:1:exon

position:1103328:1
position: 1103328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398837
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398837
product: solute carrier family 12 member 6-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033997924.2
SIO_010081: LOC117398837
subclass of: SO_0000673
so part of: LOC117398837
location: join(1059032..1059260,1067153..1067247,1068227..1068358,1068773..1068919,1069821..1069875,1070483..1070613,1071527..1071768,1075659..1075900,1076366..1076530,1080072..1080170,1080428..1080485,1081600..1081774,1082216..1082334,1083018..1083116,1083840..1083959,1084228..1084332,1087831..1087999,1088239..1088434,1089983..1090152,1090270..1090401,1090783..1090890,1101454..1101668,1102887..1103020,1103328..1103654)
location: region:1059032-1103654:1
so has part: feature:1059032-1059260:1:exon
so has part: feature:1067153-1067247:1:exon
so has part: feature:1068227-1068358:1:exon
so has part: feature:1068773-1068919:1:exon
so has part: feature:1069821-1069875:1:exon
so has part: feature:1070483-1070613:1:exon
so has part: feature:1071527-1071768:1:exon
so has part: feature:1075659-1075900:1:exon
so has part: feature:1076366-1076530:1:exon
so has part: feature:1080072-1080170:1:exon
so has part: feature:1080428-1080485:1:exon
so has part: feature:1081600-1081774:1:exon
so has part: feature:1082216-1082334:1:exon
so has part: feature:1083018-1083116:1:exon
so has part: feature:1083840-1083959:1:exon
so has part: feature:1084228-1084332:1:exon
so has part: feature:1087831-1087999:1:exon
so has part: feature:1088239-1088434:1:exon
so has part: feature:1089983-1090152:1:exon
so has part: feature:1090270-1090401:1:exon
so has part: feature:1090783-1090890:1:exon
so has part: feature:1101454-1101668:1:exon
so has part: feature:1102887-1103020:1:exon
so has part: feature:1103328-1103654:1:exon

position:1059032:1
position: 1059032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059032-1059260:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1067153-1067247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1068227-1068358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1068773-1068919:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1069821-1069875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070483-1070613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1071527-1071768:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075659-1075900:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1076366-1076530:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1080072-1080170:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1080428-1080485:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1081600-1081774:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1082216-1082334:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1083018-1083116:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1083840-1083959:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1084228-1084332:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1087831-1087999:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1088239-1088434:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1089983-1090152:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1090270-1090401:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1090783-1090890:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1101454-1101668:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1102887-1103020:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1103328-1103654:1:exon

LOC117398837
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 6-like isoform X1
translation: MASVRFTVTPTKAEDVPGLPDTSPDVSSRSSSRVRFGSRESVSRSEPLSEGSGALTTSVGTTGAETPDRSAVGTEPVDSHPKASNLYINNSHYVDDDDFYDRNLALFEEEMDTRPKVSSLLSHLANYTNLTQGAKEHEEAESIEGDKRKPTKSPKMGTFMGVYLPCLQNIFGVILFLRLTWVVGTAGVLQALLIVLICCCCTLLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEIFLMYIVPAAAIFRSESEDGEAAAMLNNMRVYGTCFLVLMGLLVFVGVKYVNKLASLFLACVVISILSIYTGAFKSAFAPPHFPVCMLGNRTLSHVEMSVCAKSVIRDNETVPTRLWSSFCQALSSSSSSSSSSLLNATCDEYFSQSNLTEIQGIPGVASGVIAENLWSAYLSKGEVLEKGSLPSPAVSGSPSNRFPYVFADITTSFTLLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPLGTILAILTTSLVYLSNVVLFGACIEGVVLRDKFGDSVQGNLVVGILSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHGKANGEPTWALLLTALIAELGILIASLDLVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFTYYHWTLSFLGMSICLALMFISSWYYAIVAMVIAGMIYKYIEYNGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKYPRLLTFASQLKAGKGLTIVGSVIVGNFLESYGEALAAEQTLKHLMQQEKVKGFCQLVVAVKVREGISHLIQSCGLGGMKHNSVVMGWPQGWRQSEDPRAWKTFINTVRCTTAAHQALLVPKNISLFPSNSEQLSEGSIDVWWIVHDGGMLMLLPFLLRQHKVWKKCRMRIFTVAQMEDNSIQMKKDLATFLYQLRMEAEVEVVEMHDSDISAYTYERTLMMEQRSQMLRQMRLSKSDREREAALGDSSRKVSDAFPSRPYLSDSTRNIQAQLVKDRNSMLRLTSIGSDDDDETDSGAGGPERTDRVHMTWTKEKHLASRGVKAGGGSGTPEGFRDMLSIRPDQSNVRRMHTAVKLNEVIVNKSHDARLVLLNMPGPPRNPEGDENYMEFLEVLTEGLERVLLVRGGGSEVITIYS
SIO_010081: LOC117398837
subclass of: SO_0000673
so part of: LOC117398837
location: join(1059032..1059260,1067153..1067247,1068227..1068358,1068773..1068919,1069821..1069875,1070483..1070613,1071527..1071768,1075659..1075900,1076366..1076530,1080072..1080170,1080428..1080485,1081600..1081774,1082216..1082334,1083018..1083116,1083840..1083959,1084228..1084332,1087831..1087999,1088239..1088434,1089983..1090152,1090270..1090401,1090783..1090890,1094156..1094239,1101454..1101668,1102887..1103020,1103328..1103419)
location: region:1059032-1103419:1
so has part: feature:1059032-1059260:1:exon
so has part: feature:1067153-1067247:1:exon
so has part: feature:1068227-1068358:1:exon
so has part: feature:1068773-1068919:1:exon
so has part: feature:1069821-1069875:1:exon
so has part: feature:1070483-1070613:1:exon
so has part: feature:1071527-1071768:1:exon
so has part: feature:1075659-1075900:1:exon
so has part: feature:1076366-1076530:1:exon
so has part: feature:1080072-1080170:1:exon
so has part: feature:1080428-1080485:1:exon
so has part: feature:1081600-1081774:1:exon
so has part: feature:1082216-1082334:1:exon
so has part: feature:1083018-1083116:1:exon
so has part: feature:1083840-1083959:1:exon
so has part: feature:1084228-1084332:1:exon
so has part: feature:1087831-1087999:1:exon
so has part: feature:1088239-1088434:1:exon
so has part: feature:1089983-1090152:1:exon
so has part: feature:1090270-1090401:1:exon
so has part: feature:1090783-1090890:1:exon
so has part: feature:1094156-1094239:1:exon
so has part: feature:1101454-1101668:1:exon
so has part: feature:1102887-1103020:1:exon
so has part: feature:1103328-1103419:1:exon

XP_033853814.1
type: Protein
SIO_000068: ncbiprotein

position:1103419:1
position: 1103419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059032-1059260:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1067153-1067247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1068227-1068358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1068773-1068919:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1069821-1069875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070483-1070613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1071527-1071768:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075659-1075900:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1076366-1076530:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1080072-1080170:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1080428-1080485:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1081600-1081774:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1082216-1082334:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1083018-1083116:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1083840-1083959:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1084228-1084332:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1087831-1087999:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1088239-1088434:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1089983-1090152:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1090270-1090401:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1090783-1090890:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1094156-1094239:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1101454-1101668:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1102887-1103020:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1103328-1103419:1:exon

LOC117398837
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 6-like isoform X2
translation: MASVRFTVTPTKAEDVPGLPDTSPDVSSRSSSRVRFGSRESVSRSEPLSEGSGALTTSVGTTGAETPDRSAVGTEPVDSHPKASNLYINNSHYVDDDDFYDRNLALFEEEMDTRPKVSSLLSHLANYTNLTQGAKEHEEAESIEGDKRKPTKSPKMGTFMGVYLPCLQNIFGVILFLRLTWVVGTAGVLQALLIVLICCCCTLLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEIFLMYIVPAAAIFRSESEDGEAAAMLNNMRVYGTCFLVLMGLLVFVGVKYVNKLASLFLACVVISILSIYTGAFKSAFAPPHFPVCMLGNRTLSHVEMSVCAKSVIRDNETVPTRLWSSFCQALSSSSSSSSSSLLNATCDEYFSQSNLTEIQGIPGVASGVIAENLWSAYLSKGEVLEKGSLPSPAVSGSPSNRFPYVFADITTSFTLLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPLGTILAILTTSLVYLSNVVLFGACIEGVVLRDKFGDSVQGNLVVGILSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHGKANGEPTWALLLTALIAELGILIASLDLVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFTYYHWTLSFLGMSICLALMFISSWYYAIVAMVIAGMIYKYIEYNGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKYPRLLTFASQLKAGKGLTIVGSVIVGNFLESYGEALAAEQTLKHLMQQEKVKGFCQLVVAVKVREGISHLIQSCGLGGMKHNSVVMGWPQGWRQSEDPRAWKTFINTVRCTTAAHQALLVPKNISLFPSNSEQLSEGSIDVWWIVHDGGMLMLLPFLLRQHKVWKKCRMRIFTVAQMEDNSIQMKKDLATFLYQLRMEAEVEVVEMHDSDISAYTYERTLMMEQRSQMLRQMRLSKSDREREAQLVKDRNSMLRLTSIGSDDDDETDSGAGGPERTDRVHMTWTKEKHLASRGVKAGGGSGTPEGFRDMLSIRPDQSNVRRMHTAVKLNEVIVNKSHDARLVLLNMPGPPRNPEGDENYMEFLEVLTEGLERVLLVRGGGSEVITIYS
SIO_010081: LOC117398837
subclass of: SO_0000673
so part of: LOC117398837
location: join(1059032..1059260,1067153..1067247,1068227..1068358,1068773..1068919,1069821..1069875,1070483..1070613,1071527..1071768,1075659..1075900,1076366..1076530,1080072..1080170,1080428..1080485,1081600..1081774,1082216..1082334,1083018..1083116,1083840..1083959,1084228..1084332,1087831..1087999,1088239..1088434,1089983..1090152,1090270..1090401,1090783..1090890,1101454..1101668,1102887..1103020,1103328..1103419)
location: region:1059032-1103419:1
so has part: feature:1059032-1059260:1:exon
so has part: feature:1067153-1067247:1:exon
so has part: feature:1068227-1068358:1:exon
so has part: feature:1068773-1068919:1:exon
so has part: feature:1069821-1069875:1:exon
so has part: feature:1070483-1070613:1:exon
so has part: feature:1071527-1071768:1:exon
so has part: feature:1075659-1075900:1:exon
so has part: feature:1076366-1076530:1:exon
so has part: feature:1080072-1080170:1:exon
so has part: feature:1080428-1080485:1:exon
so has part: feature:1081600-1081774:1:exon
so has part: feature:1082216-1082334:1:exon
so has part: feature:1083018-1083116:1:exon
so has part: feature:1083840-1083959:1:exon
so has part: feature:1084228-1084332:1:exon
so has part: feature:1087831-1087999:1:exon
so has part: feature:1088239-1088434:1:exon
so has part: feature:1089983-1090152:1:exon
so has part: feature:1090270-1090401:1:exon
so has part: feature:1090783-1090890:1:exon
so has part: feature:1101454-1101668:1:exon
so has part: feature:1102887-1103020:1:exon
so has part: feature:1103328-1103419:1:exon

XP_033853815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1059032-1059260:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1067153-1067247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1068227-1068358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1068773-1068919:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1069821-1069875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070483-1070613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1071527-1071768:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075659-1075900:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1076366-1076530:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1080072-1080170:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1080428-1080485:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1081600-1081774:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1082216-1082334:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1083018-1083116:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1083840-1083959:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1084228-1084332:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1087831-1087999:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1088239-1088434:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1089983-1090152:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1090270-1090401:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1090783-1090890:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1101454-1101668:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1102887-1103020:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1103328-1103419:1:exon

LOC117398837
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398837
product: solute carrier family 12 member 6-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033997925.2
SIO_010081: LOC117398837
subclass of: SO_0000673
so part of: LOC117398837
location: join(1063477..1064058,1067153..1067247,1068227..1068358,1068773..1068919,1069821..1069875,1070483..1070613,1071527..1071768,1075659..1075900,1076366..1076530,1080072..1080170,1080428..1080485,1081600..1081774,1082216..1082334,1083018..1083116,1083840..1083959,1084228..1084332,1087831..1087999,1088239..1088434,1089983..1090152,1090270..1090401,1090783..1090890,1094156..1094239,1101454..1101668,1102887..1103020,1103328..1103654)
location: region:1063477-1103654:1
so has part: feature:1063477-1064058:1:exon
so has part: feature:1067153-1067247:1:exon
so has part: feature:1068227-1068358:1:exon
so has part: feature:1068773-1068919:1:exon
so has part: feature:1069821-1069875:1:exon
so has part: feature:1070483-1070613:1:exon
so has part: feature:1071527-1071768:1:exon
so has part: feature:1075659-1075900:1:exon
so has part: feature:1076366-1076530:1:exon
so has part: feature:1080072-1080170:1:exon
so has part: feature:1080428-1080485:1:exon
so has part: feature:1081600-1081774:1:exon
so has part: feature:1082216-1082334:1:exon
so has part: feature:1083018-1083116:1:exon
so has part: feature:1083840-1083959:1:exon
so has part: feature:1084228-1084332:1:exon
so has part: feature:1087831-1087999:1:exon
so has part: feature:1088239-1088434:1:exon
so has part: feature:1089983-1090152:1:exon
so has part: feature:1090270-1090401:1:exon
so has part: feature:1090783-1090890:1:exon
so has part: feature:1094156-1094239:1:exon
so has part: feature:1101454-1101668:1:exon
so has part: feature:1102887-1103020:1:exon
so has part: feature:1103328-1103654:1:exon

position:1063477:1
position: 1063477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063477-1064058:1:exon

position:1064058:1
position: 1064058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1067153-1067247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1068227-1068358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1068773-1068919:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1069821-1069875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070483-1070613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1071527-1071768:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075659-1075900:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1076366-1076530:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1080072-1080170:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1080428-1080485:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1081600-1081774:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1082216-1082334:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1083018-1083116:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1083840-1083959:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1084228-1084332:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1087831-1087999:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1088239-1088434:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1089983-1090152:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1090270-1090401:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1090783-1090890:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1094156-1094239:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1101454-1101668:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1102887-1103020:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1103328-1103654:1:exon

LOC117398837
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 6-like isoform X3
translation: MPHFTVTKVPDISEDEDTNDTIDSVDSHPKASNLYINNSHYVDDDDFYDRNLALFEEEMDTRPKVSSLLSHLANYTNLTQGAKEHEEAESIEGDKRKPTKSPKMGTFMGVYLPCLQNIFGVILFLRLTWVVGTAGVLQALLIVLICCCCTLLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEIFLMYIVPAAAIFRSESEDGEAAAMLNNMRVYGTCFLVLMGLLVFVGVKYVNKLASLFLACVVISILSIYTGAFKSAFAPPHFPVCMLGNRTLSHVEMSVCAKSVIRDNETVPTRLWSSFCQALSSSSSSSSSSLLNATCDEYFSQSNLTEIQGIPGVASGVIAENLWSAYLSKGEVLEKGSLPSPAVSGSPSNRFPYVFADITTSFTLLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPLGTILAILTTSLVYLSNVVLFGACIEGVVLRDKFGDSVQGNLVVGILSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHGKANGEPTWALLLTALIAELGILIASLDLVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFTYYHWTLSFLGMSICLALMFISSWYYAIVAMVIAGMIYKYIEYNGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKYPRLLTFASQLKAGKGLTIVGSVIVGNFLESYGEALAAEQTLKHLMQQEKVKGFCQLVVAVKVREGISHLIQSCGLGGMKHNSVVMGWPQGWRQSEDPRAWKTFINTVRCTTAAHQALLVPKNISLFPSNSEQLSEGSIDVWWIVHDGGMLMLLPFLLRQHKVWKKCRMRIFTVAQMEDNSIQMKKDLATFLYQLRMEAEVEVVEMHDSDISAYTYERTLMMEQRSQMLRQMRLSKSDREREAALGDSSRKVSDAFPSRPYLSDSTRNIQAQLVKDRNSMLRLTSIGSDDDDETDSGAGGPERTDRVHMTWTKEKHLASRGVKAGGGSGTPEGFRDMLSIRPDQSNVRRMHTAVKLNEVIVNKSHDARLVLLNMPGPPRNPEGDENYMEFLEVLTEGLERVLLVRGGGSEVITIYS
SIO_010081: LOC117398837
subclass of: SO_0000673
so part of: LOC117398837
location: join(1063986..1064058,1067153..1067247,1068227..1068358,1068773..1068919,1069821..1069875,1070483..1070613,1071527..1071768,1075659..1075900,1076366..1076530,1080072..1080170,1080428..1080485,1081600..1081774,1082216..1082334,1083018..1083116,1083840..1083959,1084228..1084332,1087831..1087999,1088239..1088434,1089983..1090152,1090270..1090401,1090783..1090890,1094156..1094239,1101454..1101668,1102887..1103020,1103328..1103419)
location: region:1063986-1103419:1
so has part: feature:1063986-1064058:1:exon
so has part: feature:1067153-1067247:1:exon
so has part: feature:1068227-1068358:1:exon
so has part: feature:1068773-1068919:1:exon
so has part: feature:1069821-1069875:1:exon
so has part: feature:1070483-1070613:1:exon
so has part: feature:1071527-1071768:1:exon
so has part: feature:1075659-1075900:1:exon
so has part: feature:1076366-1076530:1:exon
so has part: feature:1080072-1080170:1:exon
so has part: feature:1080428-1080485:1:exon
so has part: feature:1081600-1081774:1:exon
so has part: feature:1082216-1082334:1:exon
so has part: feature:1083018-1083116:1:exon
so has part: feature:1083840-1083959:1:exon
so has part: feature:1084228-1084332:1:exon
so has part: feature:1087831-1087999:1:exon
so has part: feature:1088239-1088434:1:exon
so has part: feature:1089983-1090152:1:exon
so has part: feature:1090270-1090401:1:exon
so has part: feature:1090783-1090890:1:exon
so has part: feature:1094156-1094239:1:exon
so has part: feature:1101454-1101668:1:exon
so has part: feature:1102887-1103020:1:exon
so has part: feature:1103328-1103419:1:exon

XP_033853816.1
type: Protein
SIO_000068: ncbiprotein

position:1063986:1
position: 1063986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063986-1064058:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1067153-1067247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1068227-1068358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1068773-1068919:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1069821-1069875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070483-1070613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1071527-1071768:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075659-1075900:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1076366-1076530:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1080072-1080170:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1080428-1080485:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1081600-1081774:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1082216-1082334:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1083018-1083116:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1083840-1083959:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1084228-1084332:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1087831-1087999:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1088239-1088434:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1089983-1090152:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1090270-1090401:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1090783-1090890:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1094156-1094239:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1101454-1101668:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1102887-1103020:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1103328-1103419:1:exon

emc4
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: emc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1106121..1111434)
location: region:1106121-1111434:-1
so has part: feature:1106121-1111434:-1:exon
subclass of: SO_0000010

117398924
type: Gene
SIO_000068: ncbigene

position:1106121:-1
position: 1106121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1111434:-1
position: 1111434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1106121-1111434:-1:exon

emc4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: emc4
product: ER membrane protein complex subunit 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033998027.2
SIO_010081: emc4
subclass of: SO_0000673
so part of: emc4
location: complement(join(1106121..1106326,1106809..1106969,1107598..1107751,1108818..1108929,1109373..1109487,1111271..1111434))
location: region:1106121-1111434:-1
so has part: feature:1111271-1111434:-1:exon
so has part: feature:1109373-1109487:-1:exon
so has part: feature:1108818-1108929:-1:exon
so has part: feature:1107598-1107751:-1:exon
so has part: feature:1106809-1106969:-1:exon
so has part: feature:1106121-1106326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1111271-1111434:-1:exon

position:1111271:-1
position: 1111271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1109373-1109487:-1:exon

position:1109373:-1
position: 1109373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109487:-1
position: 1109487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1108818-1108929:-1:exon

position:1108818:-1
position: 1108818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108929:-1
position: 1108929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1107598-1107751:-1:exon

position:1107598:-1
position: 1107598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1107751:-1
position: 1107751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1106809-1106969:-1:exon

position:1106809:-1
position: 1106809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106969:-1
position: 1106969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1106121-1106326:-1:exon

position:1106326:-1
position: 1106326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

emc4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: emc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER membrane protein complex subunit 4
translation: MSSPGSTSVAAVAVRGGGAKKLKWSLELGLGNPRRGDRQGNQGDCLYPVGYSDKPVPDTSVHETDRNLVEKRCWDVALAPLKQIPMNLFIMYMAGNTISIFPIMMVCMMAWRPIQALMSVSATFKLLDSSSQQWLQGLVYLIGNLLGLALAIYKCQSMGLLPTHSSDWLAFIEPPEKMEYLGGGMVL
SIO_010081: emc4
subclass of: SO_0000673
so part of: emc4
location: complement(join(1106291..1106326,1106809..1106969,1107598..1107751,1108818..1108929,1109373..1109473))
location: region:1106291-1109473:-1
so has part: feature:1109373-1109473:-1:exon
so has part: feature:1108818-1108929:-1:exon
so has part: feature:1107598-1107751:-1:exon
so has part: feature:1106809-1106969:-1:exon
so has part: feature:1106291-1106326:-1:exon

XP_033853918.1
type: Protein
SIO_000068: ncbiprotein

position:1106291:-1
position: 1106291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109473:-1
position: 1109473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109373-1109473:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1108818-1108929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107598-1107751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106809-1106969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1106291-1106326:-1:exon

si:cabz01101003.1
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: si:cabz01101003.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1111744..1130493)
location: region:1111744-1130493:-1
so has part: feature:1111744-1130493:-1:exon
subclass of: SO_0000010

117398846
type: Gene
SIO_000068: ncbigene

position:1111744:-1
position: 1111744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130493:-1
position: 1130493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1111744-1130493:-1:exon

si:cabz01101003.1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: si:cabz01101003.1
product: ubiquitin carboxyl-terminal hydrolase CYLD, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033997934.2
SIO_010081: si:cabz01101003.1
subclass of: SO_0000673
so part of: si:cabz01101003.1
location: complement(join(1111744..1112714,1114699..1114879,1115294..1115513,1115862..1115980,1116386..1116494,1117054..1117186,1117759..1117822,1117942..1118033,1119063..1119185,1119425..1119566,1121508..1121673,1123285..1123604,1124143..1124232,1125165..1125215,1125296..1125401,1125568..1125840,1126634..1126909,1127407..1127673,1130281..1130493))
location: region:1111744-1130493:-1
so has part: feature:1130281-1130493:-1:exon
so has part: feature:1127407-1127673:-1:exon
so has part: feature:1126634-1126909:-1:exon
so has part: feature:1125568-1125840:-1:exon
so has part: feature:1125296-1125401:-1:exon
so has part: feature:1125165-1125215:-1:exon
so has part: feature:1124143-1124232:-1:exon
so has part: feature:1123285-1123604:-1:exon
so has part: feature:1121508-1121673:-1:exon
so has part: feature:1119425-1119566:-1:exon
so has part: feature:1119063-1119185:-1:exon
so has part: feature:1117942-1118033:-1:exon
so has part: feature:1117759-1117822:-1:exon
so has part: feature:1117054-1117186:-1:exon
so has part: feature:1116386-1116494:-1:exon
so has part: feature:1115862-1115980:-1:exon
so has part: feature:1115294-1115513:-1:exon
so has part: feature:1114699-1114879:-1:exon
so has part: feature:1111744-1112714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1130281-1130493:-1:exon

position:1130281:-1
position: 1130281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1127407-1127673:-1:exon

position:1127407:-1
position: 1127407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1127673:-1
position: 1127673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1126634-1126909:-1:exon

position:1126634:-1
position: 1126634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126909:-1
position: 1126909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1125568-1125840:-1:exon

position:1125568:-1
position: 1125568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125840:-1
position: 1125840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1125296-1125401:-1:exon

position:1125296:-1
position: 1125296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125401:-1
position: 1125401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1125165-1125215:-1:exon

position:1125165:-1
position: 1125165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125215:-1
position: 1125215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1124143-1124232:-1:exon

position:1124143:-1
position: 1124143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1124232:-1
position: 1124232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1123285-1123604:-1:exon

position:1123285:-1
position: 1123285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123604:-1
position: 1123604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1121508-1121673:-1:exon

position:1121508:-1
position: 1121508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1121673:-1
position: 1121673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1119425-1119566:-1:exon

position:1119425:-1
position: 1119425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119566:-1
position: 1119566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1119063-1119185:-1:exon

position:1119063:-1
position: 1119063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119185:-1
position: 1119185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1117942-1118033:-1:exon

position:1117942:-1
position: 1117942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118033:-1
position: 1118033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1117759-1117822:-1:exon

position:1117759:-1
position: 1117759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1117822:-1
position: 1117822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1117054-1117186:-1:exon

position:1117054:-1
position: 1117054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1117186:-1
position: 1117186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1116386-1116494:-1:exon

position:1116386:-1
position: 1116386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116494:-1
position: 1116494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1115862-1115980:-1:exon

position:1115862:-1
position: 1115862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1115980:-1
position: 1115980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1115294-1115513:-1:exon

position:1115294:-1
position: 1115294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1115513:-1
position: 1115513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1114699-1114879:-1:exon

position:1114699:-1
position: 1114699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114879:-1
position: 1114879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1111744-1112714:-1:exon

position:1112714:-1
position: 1112714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

si:cabz01101003.1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: si:cabz01101003.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
translation: MANNQDRSRRPPKMYLVMTEYKANDQLEGAIRILQGSLCQRQEEALEMRPQVVAAQKRNRSEQVWVKVLDSGHVLKVGKGALTEISEDLASLLQPVSDLQERLALSSNPARLLRLGNLHLGAGLRVQLHQSREKAPGVLRYVGPLPGGSSGVHFGVELQGWAVGHGFTNGSYKGHQLFQCPENGGVFVPVSRLERSGGEAEVLSRGADCSITPGNRVYFHMENTEQHGNVAFCGVLPTKEELGVFVGIRLDNAVGSWDGYFKGTQLCNFPSPNYGILLPISKVVKVISERSQNTRLQRKSHRDHSPEIESGSTKWYVGKKEHPTKKEASERTGRSGDYSGPSEDPSRVPRTVPVRHHLPEPLRLDENTQASPPVPQTSQSSPSHTHMSRPDHQGKQSEWEGPGLEVNSMVQVNDPPLYGVIRWIGKIKGYPDPIAGLELDDFLPAGTDGTYLGERYFHCTPNKGLFVKLKNCRSDSRFPAHQFPANQIQRCNSIAFAEWTSEVVEDHTPPTFGEEAKERFIGWKRGIQGNCNSCYLDATLFCLFSFSSVLDTVLLRPKGKNDGELYRETRALLRSEIVNPLRKHGYVCATKIMALRKILEAAGKSSGFTSEEKDPEEFLNKLFQVLKVEPLLKIRSGGQKPQDCYFYQLFPERETRVRIPSVQQLLEWSFVHSDLKFSEAPSCLIIQMPRFGKDYKMFSAILPSLQLDITDLLDNTPRECSLCQGLALLECKECYEETDITPGRIKQFCATCSKQVHRHRQRLSHNPQRVRAPEGEWPVGGEESRAMPRETLDLYAVLCIETSHYVSFVKYGEKVTDWLFFDSMADREGGENGFNIPQVSPCPEVAPFLQMSALQLRDFDSKSIQGCARRLLCDAYMCLYHSPSLSLYKTAQDGSLRGREFLTWVFFRTKVAHGWINLVATVNVDYTWNKKQEITHLHINQQRHPK
SIO_010081: si:cabz01101003.1
subclass of: SO_0000673
so part of: si:cabz01101003.1
location: complement(join(1112540..1112714,1114699..1114879,1115294..1115513,1115862..1115980,1116386..1116494,1117054..1117186,1117759..1117822,1117942..1118033,1119063..1119185,1119425..1119566,1121508..1121673,1123285..1123604,1124143..1124232,1125165..1125215,1125296..1125401,1125568..1125840,1126634..1126909,1127407..1127607))
location: region:1112540-1127607:-1
so has part: feature:1127407-1127607:-1:exon
so has part: feature:1126634-1126909:-1:exon
so has part: feature:1125568-1125840:-1:exon
so has part: feature:1125296-1125401:-1:exon
so has part: feature:1125165-1125215:-1:exon
so has part: feature:1124143-1124232:-1:exon
so has part: feature:1123285-1123604:-1:exon
so has part: feature:1121508-1121673:-1:exon
so has part: feature:1119425-1119566:-1:exon
so has part: feature:1119063-1119185:-1:exon
so has part: feature:1117942-1118033:-1:exon
so has part: feature:1117759-1117822:-1:exon
so has part: feature:1117054-1117186:-1:exon
so has part: feature:1116386-1116494:-1:exon
so has part: feature:1115862-1115980:-1:exon
so has part: feature:1115294-1115513:-1:exon
so has part: feature:1114699-1114879:-1:exon
so has part: feature:1112540-1112714:-1:exon

XP_033853825.2
type: Protein
SIO_000068: ncbiprotein

position:1112540:-1
position: 1112540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1127607:-1
position: 1127607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1127407-1127607:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1126634-1126909:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1125568-1125840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1125296-1125401:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1125165-1125215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1124143-1124232:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1123285-1123604:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1121508-1121673:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1119425-1119566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1119063-1119185:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1117942-1118033:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1117759-1117822:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1117054-1117186:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1116386-1116494:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1115862-1115980:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1115294-1115513:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1114699-1114879:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1112540-1112714:-1:exon

si:cabz01101003.1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: si:cabz01101003.1
product: ubiquitin carboxyl-terminal hydrolase CYLD, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033997935.2
SIO_010081: si:cabz01101003.1
subclass of: SO_0000673
so part of: si:cabz01101003.1
location: complement(join(1113834..1114879,1115294..1115513,1115862..1115980,1116386..1116494,1117054..1117186,1117759..1117822,1117942..1118033,1119063..1119185,1119425..1119566,1121508..1121673,1123285..1123604,1124143..1124232,1125165..1125215,1125296..1125401,1125568..1125840,1126634..1126909,1127407..1127673,1130281..1130493))
location: region:1113834-1130493:-1
so has part: feature:1130281-1130493:-1:exon
so has part: feature:1127407-1127673:-1:exon
so has part: feature:1126634-1126909:-1:exon
so has part: feature:1125568-1125840:-1:exon
so has part: feature:1125296-1125401:-1:exon
so has part: feature:1125165-1125215:-1:exon
so has part: feature:1124143-1124232:-1:exon
so has part: feature:1123285-1123604:-1:exon
so has part: feature:1121508-1121673:-1:exon
so has part: feature:1119425-1119566:-1:exon
so has part: feature:1119063-1119185:-1:exon
so has part: feature:1117942-1118033:-1:exon
so has part: feature:1117759-1117822:-1:exon
so has part: feature:1117054-1117186:-1:exon
so has part: feature:1116386-1116494:-1:exon
so has part: feature:1115862-1115980:-1:exon
so has part: feature:1115294-1115513:-1:exon
so has part: feature:1113834-1114879:-1:exon

position:1113834:-1
position: 1113834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1130281-1130493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1127407-1127673:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1126634-1126909:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1125568-1125840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1125296-1125401:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1125165-1125215:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1124143-1124232:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1123285-1123604:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1121508-1121673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1119425-1119566:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1119063-1119185:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1117942-1118033:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1117759-1117822:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1117054-1117186:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1116386-1116494:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1115862-1115980:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1115294-1115513:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1113834-1114879:-1:exon

si:cabz01101003.1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: si:cabz01101003.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase CYLD isoform X2
translation: MANNQDRSRRPPKMYLVMTEYKANDQLEGAIRILQGSLCQRQEEALEMRPQVVAAQKRNRSEQVWVKVLDSGHVLKVGKGALTEISEDLASLLQPVSDLQERLALSSNPARLLRLGNLHLGAGLRVQLHQSREKAPGVLRYVGPLPGGSSGVHFGVELQGWAVGHGFTNGSYKGHQLFQCPENGGVFVPVSRLERSGGEAEVLSRGADCSITPGNRVYFHMENTEQHGNVAFCGVLPTKEELGVFVGIRLDNAVGSWDGYFKGTQLCNFPSPNYGILLPISKVVKVISERSQNTRLQRKSHRDHSPEIESGSTKWYVGKKEHPTKKEASERTGRSGDYSGPSEDPSRVPRTVPVRHHLPEPLRLDENTQASPPVPQTSQSSPSHTHMSRPDHQGKQSEWEGPGLEVNSMVQVNDPPLYGVIRWIGKIKGYPDPIAGLELDDFLPAGTDGTYLGERYFHCTPNKGLFVKLKNCRSDSRFPAHQFPANQIQRCNSIAFAEWTSEVVEDHTPPTFGEEAKERFIGWKRGIQGNCNSCYLDATLFCLFSFSSVLDTVLLRPKGKNDGELYRETRALLRSEIVNPLRKHGYVCATKIMALRKILEAAGKSSGFTSEEKDPEEFLNKLFQVLKVEPLLKIRSGGQKPQDCYFYQLFPERETRVRIPSVQQLLEWSFVHSDLKFSEAPSCLIIQMPRFGKDYKMFSAILPSLQLDITDLLDNTPRECSLCQGLALLECKECYEETDITPGRIKQFCATCSKQVHRHRQRLSHNPQRVRAPEGEWPVGGEESRAMPRETLDLYAVLCIETSHYVSFVKYGEKVTDWLFFDSMADREGGENGFNIPQVSPCPEVAPFLQMSALQLRDFDSKSIQGCARRLLCDAYMCLYHSPSLSLYK
SIO_010081: si:cabz01101003.1
subclass of: SO_0000673
so part of: si:cabz01101003.1
location: complement(join(1114695..1114879,1115294..1115513,1115862..1115980,1116386..1116494,1117054..1117186,1117759..1117822,1117942..1118033,1119063..1119185,1119425..1119566,1121508..1121673,1123285..1123604,1124143..1124232,1125165..1125215,1125296..1125401,1125568..1125840,1126634..1126909,1127407..1127607))
location: region:1114695-1127607:-1
so has part: feature:1127407-1127607:-1:exon
so has part: feature:1126634-1126909:-1:exon
so has part: feature:1125568-1125840:-1:exon
so has part: feature:1125296-1125401:-1:exon
so has part: feature:1125165-1125215:-1:exon
so has part: feature:1124143-1124232:-1:exon
so has part: feature:1123285-1123604:-1:exon
so has part: feature:1121508-1121673:-1:exon
so has part: feature:1119425-1119566:-1:exon
so has part: feature:1119063-1119185:-1:exon
so has part: feature:1117942-1118033:-1:exon
so has part: feature:1117759-1117822:-1:exon
so has part: feature:1117054-1117186:-1:exon
so has part: feature:1116386-1116494:-1:exon
so has part: feature:1115862-1115980:-1:exon
so has part: feature:1115294-1115513:-1:exon
so has part: feature:1114695-1114879:-1:exon

XP_033853826.2
type: Protein
SIO_000068: ncbiprotein

position:1114695:-1
position: 1114695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1127407-1127607:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1126634-1126909:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1125568-1125840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1125296-1125401:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1125165-1125215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1124143-1124232:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1123285-1123604:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1121508-1121673:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1119425-1119566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1119063-1119185:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1117942-1118033:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1117759-1117822:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1117054-1117186:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1116386-1116494:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1115862-1115980:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1115294-1115513:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1114695-1114879:-1:exon

LOC117398838
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398838
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1138053..1168853)
location: region:1138053-1168853:-1
so has part: feature:1138053-1168853:-1:exon
subclass of: SO_0000010

117398838
type: Gene
SIO_000068: ncbigene

position:1138053:-1
position: 1138053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168853:-1
position: 1168853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1138053-1168853:-1:exon

LOC117398838
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398838
product: adenylate cyclase type 2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914496.1
SIO_010081: LOC117398838
subclass of: SO_0000673
so part of: LOC117398838
location: complement(join(1138053..1138563,1139590..1139714,1139856..1139970,1140648..1140749,1142962..1143108,1143190..1143348,1143432..1143516,1143973..1144151,1144872..1144940,1146367..1146504,1147289..1147373,1149117..1149214,1149800..1149869,1150038..1150100,1150299..1150339,1150921..1151101,1151426..1151573,1152975..1153129,1153652..1153812,1154383..1154494,1156500..1156645,1157317..1157466,1160981..1161142,1161812..1162009,1162920..1164223,1168306..1168853))
location: region:1138053-1168853:-1
so has part: feature:1168306-1168853:-1:exon
so has part: feature:1162920-1164223:-1:exon
so has part: feature:1161812-1162009:-1:exon
so has part: feature:1160981-1161142:-1:exon
so has part: feature:1157317-1157466:-1:exon
so has part: feature:1156500-1156645:-1:exon
so has part: feature:1154383-1154494:-1:exon
so has part: feature:1153652-1153812:-1:exon
so has part: feature:1152975-1153129:-1:exon
so has part: feature:1151426-1151573:-1:exon
so has part: feature:1150921-1151101:-1:exon
so has part: feature:1150299-1150339:-1:exon
so has part: feature:1150038-1150100:-1:exon
so has part: feature:1149800-1149869:-1:exon
so has part: feature:1149117-1149214:-1:exon
so has part: feature:1147289-1147373:-1:exon
so has part: feature:1146367-1146504:-1:exon
so has part: feature:1144872-1144940:-1:exon
so has part: feature:1143973-1144151:-1:exon
so has part: feature:1143432-1143516:-1:exon
so has part: feature:1143190-1143348:-1:exon
so has part: feature:1142962-1143108:-1:exon
so has part: feature:1140648-1140749:-1:exon
so has part: feature:1139856-1139970:-1:exon
so has part: feature:1139590-1139714:-1:exon
so has part: feature:1138053-1138563:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1168306-1168853:-1:exon

position:1168306:-1
position: 1168306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1162920-1164223:-1:exon

position:1162920:-1
position: 1162920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164223:-1
position: 1164223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1161812-1162009:-1:exon

position:1161812:-1
position: 1161812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162009:-1
position: 1162009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1160981-1161142:-1:exon

position:1160981:-1
position: 1160981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161142:-1
position: 1161142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1157317-1157466:-1:exon

position:1157317:-1
position: 1157317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157466:-1
position: 1157466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1156500-1156645:-1:exon

position:1156500:-1
position: 1156500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156645:-1
position: 1156645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1154383-1154494:-1:exon

position:1154383:-1
position: 1154383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154494:-1
position: 1154494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1153652-1153812:-1:exon

position:1153652:-1
position: 1153652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1153812:-1
position: 1153812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1152975-1153129:-1:exon

position:1152975:-1
position: 1152975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1153129:-1
position: 1153129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1151426-1151573:-1:exon

position:1151426:-1
position: 1151426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151573:-1
position: 1151573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1150921-1151101:-1:exon

position:1150921:-1
position: 1150921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151101:-1
position: 1151101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1150299-1150339:-1:exon

position:1150299:-1
position: 1150299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150339:-1
position: 1150339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1150038-1150100:-1:exon

position:1150038:-1
position: 1150038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150100:-1
position: 1150100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1149800-1149869:-1:exon

position:1149800:-1
position: 1149800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149869:-1
position: 1149869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1149117-1149214:-1:exon

position:1149117:-1
position: 1149117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149214:-1
position: 1149214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1147289-1147373:-1:exon

position:1147289:-1
position: 1147289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1147373:-1
position: 1147373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1146367-1146504:-1:exon

position:1146367:-1
position: 1146367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146504:-1
position: 1146504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1144872-1144940:-1:exon

position:1144872:-1
position: 1144872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144940:-1
position: 1144940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1143973-1144151:-1:exon

position:1143973:-1
position: 1143973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144151:-1
position: 1144151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1143432-1143516:-1:exon

position:1143432:-1
position: 1143432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143516:-1
position: 1143516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1143190-1143348:-1:exon

position:1143190:-1
position: 1143190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143348:-1
position: 1143348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1142962-1143108:-1:exon

position:1142962:-1
position: 1142962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143108:-1
position: 1143108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1140648-1140749:-1:exon

position:1140648:-1
position: 1140648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140749:-1
position: 1140749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1139856-1139970:-1:exon

position:1139856:-1
position: 1139856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1139970:-1
position: 1139970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1139590-1139714:-1:exon

position:1139590:-1
position: 1139590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1139714:-1
position: 1139714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1138053-1138563:-1:exon

position:1138563:-1
position: 1138563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398838
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398838
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1153670..1153672),aa:OTHER)
product: LOW QUALITY PROTEIN: adenylate cyclase type 2-like
translation: MVMEPGAAGAAPVTRKREEALCQTSYRPMQQQQPASLFTLLIILGFSLTLVAVFFISQRPVSGHLGFVITVFVALGAFALLFMLACAEPLFQRCHGLISLLVWGCLLTMAFVFAFTGGPVQAWEQVAFFLFITIIVYTLLPLCLKYALIGGVVTSLAHIIVFSIYVPVTNHSIEHLELQLLSNAVVFICANLVGVYHKTVTERALQNTCRDGISFRQSRSKLVSEKKQQEHLLLSVLPAYIALEMKAEIIERLKDKQPRLENKHNFHNLYVKQHKHVSILYADIVGFTQLASMCSPKELVLMLNELFGKFDQIAKENECMRIKILGDCYYCVSGLPVSLPSVCVPSHAINCVNTPAMGLDIXCHILNHLREATGVSIDMRVGVHSGNVLSGVIGLQKWQYDVWSKDVTLANHMESGGLPGRVHITEATYSHLDGVYEVEEGEGETRDSYLTGLKTYLVIDPRARDFTAEVSAPDSANGLSPPPHEGVRQQRASVRMARYLESWGAVKPFAHLSHERSVELSKPPDLNAAAIQMYNNQDRTIDGTQSQRPEDHMNEHIESVYSQKHWVKSGSMNPITLYFKDKSIEKEFRWAPLPDFHFYMACSVLIFIAIFIIQMFISYKNAALGISYGVSFFIFLLLLFTCFTGHLTRWTQKGPKFIQWIPSICAAAIKQPLARVTLAVITILLILIMALLNFFFLPEPVSTNSTEKNSNHLYTGPYYLYCCLLSMLSCSVFLRMNFELKLTLLTLALVVYEVIFLFSHGYRSDHYVSELYTNSSRPGVLKEPKVMAGIWLFVFFFTVLVLARQDEFYSRLDFLWKRKFGQEREEIETMENLNRVLLENMLPAHVATQFIGQNRRNEDLYSQSYECVCVMFASIPDFKVFYSESDVNNEGLECIRLLNEIIADFDELLSKPKFSGVEKIKTICSTYMAATGLNTVSGNNEDTDRSYAHVGIMLEFAIALMGKLDYINKHSFNDFKLRIGINHGPVIAGVIGAQKPQYDIWGNSVNVASRMDSTGVLGKIQVTEDTADILQSLGYSCSLRGVIKVKGKGDLQTYFVETDTGKTAGSMFN
SIO_010081: LOC117398838
subclass of: SO_0000673
so part of: LOC117398838
location: complement(join(1138417..1138563,1139590..1139714,1139856..1139970,1140648..1140749,1142962..1143108,1143190..1143348,1143432..1143516,1143973..1144151,1144872..1144940,1146367..1146504,1147289..1147373,1149117..1149214,1149800..1149869,1150038..1150100,1150299..1150339,1150921..1151101,1151426..1151573,1152975..1153129,1153652..1153812,1154383..1154494,1156500..1156645,1157317..1157466,1160981..1161142,1161812..1162009,1162920..1163096))
location: region:1138417-1163096:-1
so has part: feature:1162920-1163096:-1:exon
so has part: feature:1161812-1162009:-1:exon
so has part: feature:1160981-1161142:-1:exon
so has part: feature:1157317-1157466:-1:exon
so has part: feature:1156500-1156645:-1:exon
so has part: feature:1154383-1154494:-1:exon
so has part: feature:1153652-1153812:-1:exon
so has part: feature:1152975-1153129:-1:exon
so has part: feature:1151426-1151573:-1:exon
so has part: feature:1150921-1151101:-1:exon
so has part: feature:1150299-1150339:-1:exon
so has part: feature:1150038-1150100:-1:exon
so has part: feature:1149800-1149869:-1:exon
so has part: feature:1149117-1149214:-1:exon
so has part: feature:1147289-1147373:-1:exon
so has part: feature:1146367-1146504:-1:exon
so has part: feature:1144872-1144940:-1:exon
so has part: feature:1143973-1144151:-1:exon
so has part: feature:1143432-1143516:-1:exon
so has part: feature:1143190-1143348:-1:exon
so has part: feature:1142962-1143108:-1:exon
so has part: feature:1140648-1140749:-1:exon
so has part: feature:1139856-1139970:-1:exon
so has part: feature:1139590-1139714:-1:exon
so has part: feature:1138417-1138563:-1:exon

XP_034770387.1
type: Protein
SIO_000068: ncbiprotein

position:1138417:-1
position: 1138417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163096:-1
position: 1163096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1162920-1163096:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1161812-1162009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1160981-1161142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1157317-1157466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1156500-1156645:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1154383-1154494:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1153652-1153812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1152975-1153129:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1151426-1151573:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1150921-1151101:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1150299-1150339:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1150038-1150100:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1149800-1149869:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1149117-1149214:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1147289-1147373:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1146367-1146504:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1144872-1144940:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1143973-1144151:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1143432-1143516:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1143190-1143348:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1142962-1143108:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1140648-1140749:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1139856-1139970:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1139590-1139714:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1138417-1138563:-1:exon

ripk3
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: ripk3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1173963..1193291
location: region:1173963-1193291:1
so has part: feature:1173963-1193291:1:exon
subclass of: SO_0000010

117398869
type: Gene
SIO_000068: ncbigene

position:1173963:1
position: 1173963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193291:1
position: 1193291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173963-1193291:1:exon

ripk3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: ripk3
product: receptor-interacting serine-threonine kinase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033997961.2
SIO_010081: ripk3
subclass of: SO_0000673
so part of: ripk3
location: join(1173963..1174876,1176388..1176572,1177530..1177839,1183652..1183794,1184031..1184080,1184653..1184808,1186868..1186950,1187454..1187541,1188559..1188647,1189364..1189403,1189595..1189677,1189899..1189938,1190766..1190848,1192703..1192775,1192998..1193291)
location: region:1173963-1193291:1
so has part: feature:1173963-1174876:1:exon
so has part: feature:1176388-1176572:1:exon
so has part: feature:1177530-1177839:1:exon
so has part: feature:1183652-1183794:1:exon
so has part: feature:1184031-1184080:1:exon
so has part: feature:1184653-1184808:1:exon
so has part: feature:1186868-1186950:1:exon
so has part: feature:1187454-1187541:1:exon
so has part: feature:1188559-1188647:1:exon
so has part: feature:1189364-1189403:1:exon
so has part: feature:1189595-1189677:1:exon
so has part: feature:1189899-1189938:1:exon
so has part: feature:1190766-1190848:1:exon
so has part: feature:1192703-1192775:1:exon
so has part: feature:1192998-1193291:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1173963-1174876:1:exon

position:1174876:1
position: 1174876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1176388-1176572:1:exon

position:1176388:1
position: 1176388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176572:1
position: 1176572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1177530-1177839:1:exon

position:1177530:1
position: 1177530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177839:1
position: 1177839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1183652-1183794:1:exon

position:1183652:1
position: 1183652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183794:1
position: 1183794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1184031-1184080:1:exon

position:1184031:1
position: 1184031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1184080:1
position: 1184080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1184653-1184808:1:exon

position:1184653:1
position: 1184653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1184808:1
position: 1184808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1186868-1186950:1:exon

position:1186868:1
position: 1186868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186950:1
position: 1186950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1187454-1187541:1:exon

position:1187454:1
position: 1187454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187541:1
position: 1187541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1188559-1188647:1:exon

position:1188559:1
position: 1188559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188647:1
position: 1188647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1189364-1189403:1:exon

position:1189364:1
position: 1189364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189403:1
position: 1189403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1189595-1189677:1:exon

position:1189595:1
position: 1189595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189677:1
position: 1189677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1189899-1189938:1:exon

position:1189899:1
position: 1189899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189938:1
position: 1189938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1190766-1190848:1:exon

position:1190766:1
position: 1190766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1190848:1
position: 1190848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1192703-1192775:1:exon

position:1192703:1
position: 1192703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1192775:1
position: 1192775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1192998-1193291:1:exon

position:1192998:1
position: 1192998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ripk3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: ripk3
product: receptor-interacting serine-threonine kinase 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033997963.2
SIO_010081: ripk3
subclass of: SO_0000673
so part of: ripk3
location: join(1173963..1174876,1176388..1176572,1177530..1177839,1183652..1183794,1184031..1184080,1184653..1184808,1186868..1186950,1187454..1187541,1188559..1188647,1189364..1189403,1190766..1190848,1192703..1192775,1192998..1193291)
location: region:1173963-1193291:1
so has part: feature:1173963-1174876:1:exon
so has part: feature:1176388-1176572:1:exon
so has part: feature:1177530-1177839:1:exon
so has part: feature:1183652-1183794:1:exon
so has part: feature:1184031-1184080:1:exon
so has part: feature:1184653-1184808:1:exon
so has part: feature:1186868-1186950:1:exon
so has part: feature:1187454-1187541:1:exon
so has part: feature:1188559-1188647:1:exon
so has part: feature:1189364-1189403:1:exon
so has part: feature:1190766-1190848:1:exon
so has part: feature:1192703-1192775:1:exon
so has part: feature:1192998-1193291:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1173963-1174876:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176388-1176572:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177530-1177839:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1183652-1183794:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184031-1184080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1184653-1184808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1186868-1186950:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1187454-1187541:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1188559-1188647:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1189364-1189403:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1190766-1190848:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1192703-1192775:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1192998-1193291:1:exon

ripk3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: ripk3
product: receptor-interacting serine-threonine kinase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033997962.2
SIO_010081: ripk3
subclass of: SO_0000673
so part of: ripk3
location: join(1173963..1174876,1176388..1176572,1177530..1177839,1183652..1183794,1184031..1184080,1184653..1184808,1186868..1186950,1187454..1187541,1188559..1188617,1189364..1189403,1189595..1189677,1189899..1189938,1190766..1190848,1192703..1192775,1192998..1193291)
location: region:1173963-1193291:1
so has part: feature:1173963-1174876:1:exon
so has part: feature:1176388-1176572:1:exon
so has part: feature:1177530-1177839:1:exon
so has part: feature:1183652-1183794:1:exon
so has part: feature:1184031-1184080:1:exon
so has part: feature:1184653-1184808:1:exon
so has part: feature:1186868-1186950:1:exon
so has part: feature:1187454-1187541:1:exon
so has part: feature:1188559-1188617:1:exon
so has part: feature:1189364-1189403:1:exon
so has part: feature:1189595-1189677:1:exon
so has part: feature:1189899-1189938:1:exon
so has part: feature:1190766-1190848:1:exon
so has part: feature:1192703-1192775:1:exon
so has part: feature:1192998-1193291:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1173963-1174876:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176388-1176572:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177530-1177839:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1183652-1183794:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184031-1184080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1184653-1184808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1186868-1186950:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1187454-1187541:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1188559-1188617:1:exon

position:1188617:1
position: 1188617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1189364-1189403:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1189595-1189677:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1189899-1189938:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1190766-1190848:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1192703-1192775:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1192998-1193291:1:exon

ripk3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: ripk3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-interacting serine/threonine-protein kinase 4 isoform X1
translation: MTEEKCIRQDLIDAGSLVDRVQIGSGGFGIIYKARHKDWAIPVAVKELYGPSSNDVLSEARLMCEGSCQFVLRLLGVCQSPVPQGSWRLGLVMQFMENGSLEALLERLSHLPWPLTFRLAHQVALGMNFLHLRSPVLLHLDLKPSNVLLDDSFNAQLTDFGLAKLMSSVSSVSRESQGGTISYMPPEAIEDVNYKPTPAYDVFSFGILLWSLITGEKPYSHAKSSLIKWHIPRGQRPDISHIDSTAVEKLGDMMKLMQSCWDRDQNNRPLFSDCILITEKVYEHYRPGILDAIHRVQDILSKMPTRESMDSLSKEISNLRVKSDQQSPAGVPLDKHIPVHQATGPGPQQARKHIQDTSTETSGSVRSKNIKPEHHPPPPMRMHSAESRTQTTNQQYAYCQETSESVRSKNIKPEHHPPPPMRMHSAEARTQTTNQQYAFYQNPFSPPAFKPQDWYMGQPLSQSQPVIHFTASNVSGLQVGHNNVMHITKTTDKKQKTKKAK
SIO_010081: ripk3
subclass of: SO_0000673
so part of: ripk3
location: join(1176415..1176572,1177530..1177839,1183652..1183794,1184031..1184080,1184653..1184808,1186868..1186950,1187454..1187541,1188559..1188647,1189364..1189403,1189595..1189677,1189899..1189938,1190766..1190848,1192703..1192775,1192998..1193107)
location: region:1176415-1193107:1
so has part: feature:1176415-1176572:1:exon
so has part: feature:1177530-1177839:1:exon
so has part: feature:1183652-1183794:1:exon
so has part: feature:1184031-1184080:1:exon
so has part: feature:1184653-1184808:1:exon
so has part: feature:1186868-1186950:1:exon
so has part: feature:1187454-1187541:1:exon
so has part: feature:1188559-1188647:1:exon
so has part: feature:1189364-1189403:1:exon
so has part: feature:1189595-1189677:1:exon
so has part: feature:1189899-1189938:1:exon
so has part: feature:1190766-1190848:1:exon
so has part: feature:1192703-1192775:1:exon
so has part: feature:1192998-1193107:1:exon

XP_033853852.1
type: Protein
SIO_000068: ncbiprotein

position:1176415:1
position: 1176415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193107:1
position: 1193107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1176415-1176572:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1177530-1177839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1183652-1183794:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1184031-1184080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184653-1184808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1186868-1186950:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187454-1187541:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1188559-1188647:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1189364-1189403:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1189595-1189677:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1189899-1189938:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1190766-1190848:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1192703-1192775:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1192998-1193107:1:exon

ripk3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: ripk3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-interacting serine/threonine-protein kinase 3 isoform X3
translation: MTEEKCIRQDLIDAGSLVDRVQIGSGGFGIIYKARHKDWAIPVAVKELYGPSSNDVLSEARLMCEGSCQFVLRLLGVCQSPVPQGSWRLGLVMQFMENGSLEALLERLSHLPWPLTFRLAHQVALGMNFLHLRSPVLLHLDLKPSNVLLDDSFNAQLTDFGLAKLMSSVSSVSRESQGGTISYMPPEAIEDVNYKPTPAYDVFSFGILLWSLITGEKPYSHAKSSLIKWHIPRGQRPDISHIDSTAVEKLGDMMKLMQSCWDRDQNNRPLFSDCILITEKVYEHYRPGILDAIHRVQDILSKMPTRESMDSLSKEISNLRVKSDQQSPAGVPLDKHIPVHQATGPGPQQARKHIQDTSTETSGSVRSKNIKPEHHPPPPMRMHSAEARTQTTNQQYAFYQNPFSPPAFKPQDWYMGQPLSQSQPVIHFTASNVSGLQVGHNNVMHITKTTDKKQKTKKAK
SIO_010081: ripk3
subclass of: SO_0000673
so part of: ripk3
location: join(1176415..1176572,1177530..1177839,1183652..1183794,1184031..1184080,1184653..1184808,1186868..1186950,1187454..1187541,1188559..1188647,1189364..1189403,1190766..1190848,1192703..1192775,1192998..1193107)
location: region:1176415-1193107:1
so has part: feature:1176415-1176572:1:exon
so has part: feature:1177530-1177839:1:exon
so has part: feature:1183652-1183794:1:exon
so has part: feature:1184031-1184080:1:exon
so has part: feature:1184653-1184808:1:exon
so has part: feature:1186868-1186950:1:exon
so has part: feature:1187454-1187541:1:exon
so has part: feature:1188559-1188647:1:exon
so has part: feature:1189364-1189403:1:exon
so has part: feature:1190766-1190848:1:exon
so has part: feature:1192703-1192775:1:exon
so has part: feature:1192998-1193107:1:exon

XP_033853854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1176415-1176572:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1177530-1177839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1183652-1183794:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1184031-1184080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184653-1184808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1186868-1186950:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187454-1187541:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1188559-1188647:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1189364-1189403:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1190766-1190848:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1192703-1192775:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1192998-1193107:1:exon

ripk3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: ripk3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-interacting serine/threonine-protein kinase 4 isoform X2
translation: MTEEKCIRQDLIDAGSLVDRVQIGSGGFGIIYKARHKDWAIPVAVKELYGPSSNDVLSEARLMCEGSCQFVLRLLGVCQSPVPQGSWRLGLVMQFMENGSLEALLERLSHLPWPLTFRLAHQVALGMNFLHLRSPVLLHLDLKPSNVLLDDSFNAQLTDFGLAKLMSSVSSVSRESQGGTISYMPPEAIEDVNYKPTPAYDVFSFGILLWSLITGEKPYSHAKSSLIKWHIPRGQRPDISHIDSTAVEKLGDMMKLMQSCWDRDQNNRPLFSDCILITEKVYEHYRPGILDAIHRVQDILSKMPTRESMDSLSKEISNLRVKSDQQSPAGVPLDKHIPVHQATGPGPQQETSGSVRSKNIKPEHHPPPPMRMHSAESRTQTTNQQYAYCQETSESVRSKNIKPEHHPPPPMRMHSAEARTQTTNQQYAFYQNPFSPPAFKPQDWYMGQPLSQSQPVIHFTASNVSGLQVGHNNVMHITKTTDKKQKTKKAK
SIO_010081: ripk3
subclass of: SO_0000673
so part of: ripk3
location: join(1176415..1176572,1177530..1177839,1183652..1183794,1184031..1184080,1184653..1184808,1186868..1186950,1187454..1187541,1188559..1188617,1189364..1189403,1189595..1189677,1189899..1189938,1190766..1190848,1192703..1192775,1192998..1193107)
location: region:1176415-1193107:1
so has part: feature:1176415-1176572:1:exon
so has part: feature:1177530-1177839:1:exon
so has part: feature:1183652-1183794:1:exon
so has part: feature:1184031-1184080:1:exon
so has part: feature:1184653-1184808:1:exon
so has part: feature:1186868-1186950:1:exon
so has part: feature:1187454-1187541:1:exon
so has part: feature:1188559-1188617:1:exon
so has part: feature:1189364-1189403:1:exon
so has part: feature:1189595-1189677:1:exon
so has part: feature:1189899-1189938:1:exon
so has part: feature:1190766-1190848:1:exon
so has part: feature:1192703-1192775:1:exon
so has part: feature:1192998-1193107:1:exon

XP_033853853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1176415-1176572:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1177530-1177839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1183652-1183794:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1184031-1184080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184653-1184808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1186868-1186950:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187454-1187541:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1188559-1188617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1189364-1189403:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1189595-1189677:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1189899-1189938:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1190766-1190848:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1192703-1192775:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1192998-1193107:1:exon

LOC117398849
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398849
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1196467..1207255)
location: region:1196467-1207255:-1
so has part: feature:1196467-1207255:-1:exon
subclass of: SO_0000010

117398849
type: Gene
SIO_000068: ncbigene

position:1196467:-1
position: 1196467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207255:-1
position: 1207255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1196467-1207255:-1:exon

LOC117398849
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398849
product: NEDD4-binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033997938.2
SIO_010081: LOC117398849
subclass of: SO_0000673
so part of: LOC117398849
location: complement(join(1196467..1197199,1198479..1198580,1198760..1198867,1200104..1200200,1201123..1201253,1201804..1203248,1204728..1204862,1205723..1207255))
location: region:1196467-1207255:-1
so has part: feature:1205723-1207255:-1:exon
so has part: feature:1204728-1204862:-1:exon
so has part: feature:1201804-1203248:-1:exon
so has part: feature:1201123-1201253:-1:exon
so has part: feature:1200104-1200200:-1:exon
so has part: feature:1198760-1198867:-1:exon
so has part: feature:1198479-1198580:-1:exon
so has part: feature:1196467-1197199:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1205723-1207255:-1:exon

position:1205723:-1
position: 1205723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1204728-1204862:-1:exon

position:1204728:-1
position: 1204728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204862:-1
position: 1204862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1201804-1203248:-1:exon

position:1201804:-1
position: 1201804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203248:-1
position: 1203248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1201123-1201253:-1:exon

position:1201123:-1
position: 1201123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201253:-1
position: 1201253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1200104-1200200:-1:exon

position:1200104:-1
position: 1200104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200200:-1
position: 1200200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1198760-1198867:-1:exon

position:1198760:-1
position: 1198760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198867:-1
position: 1198867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1198479-1198580:-1:exon

position:1198479:-1
position: 1198479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198580:-1
position: 1198580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1196467-1197199:-1:exon

position:1197199:-1
position: 1197199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398849
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398849
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-binding protein 1
translation: MNPSPADYQEELDEFAAPAAVEGTLRDNKERVEDIFRVAFNIIGVLSTAGEPCSSQSLDCNEEDRQTWLQLRGRRADVHSAKVFIRGLCSQELQMEVLYPWDLHCVFTGAKQLFLECLIRGSGAFITVQSQGRLLLLGLTEPVVLARSRILDLVEKYERNQRIPEPHETATKSRFKMLVESRADKHTLDLLLLPSAVKEELLELASACTEPGSPRLKHRACAPTFNTPSVTQHAEESTEPHFYPQFDILDLPKTATESVSEDPQTPPFDPCHPQLHQASGDSLLLSSGTEKEFQILLKFFTTMGYQEEVVGKVLAESGLVEASQILDRIQQEQESSVPEEEEEPDLGSDDFVLGVIKSAAARCGYTEEEVLEVYRESGGASIHGLLAQLQADREGETGVPQSESARRAKDRGAVEPECETKPNKLEESRETVDEREVETRLDHYSNQIMMAYQHLGENNKTPDQAVGVLQDQTLNQRDVYLDFFDQVQAPQCTPKKNRAKAGSPPFLDQTRPKMDRHSPPTVKGPPHNVYNSGKQDSPLLDPQLNRPAMGGKAVRGKDRKRAPERGAMVTGQQRYLESLQTPFDLKLTDAPGEESLRHVIIDGSNVAMTHGLGQYFSCRGIALAVQFFWNKGHRNITVFVPQWRQKRDARIKEQKYLTELQNVGLLSYTPSREVEGKRISAHDDRFMLHLAEKADGVILTNDNLRDFIDKSPAWRNLIKKRLLQYTFVGDLFMVPDDPLGRSGPHLDEFLSKTHRSPAAGSHTYAGRVPANPIPSPPRAQTEVLQYRDHTLGGAAGVPQYRGRPAGLSREEEQQYPSNPAGVNRAEDGLLQYNSRPADVSRVEAGLQYPTRPAGVSREAPEGHTGHRRAQETECLKKQLLEVFSNQESALDIVLNCNPTVRDVNKLSEMILSFEM
SIO_010081: LOC117398849
subclass of: SO_0000673
so part of: LOC117398849
location: complement(join(1196716..1197199,1198479..1198580,1198760..1198867,1200104..1200200,1201123..1201253,1201804..1203248,1204728..1204862,1205723..1205968))
location: region:1196716-1205968:-1
so has part: feature:1205723-1205968:-1:exon
so has part: feature:1204728-1204862:-1:exon
so has part: feature:1201804-1203248:-1:exon
so has part: feature:1201123-1201253:-1:exon
so has part: feature:1200104-1200200:-1:exon
so has part: feature:1198760-1198867:-1:exon
so has part: feature:1198479-1198580:-1:exon
so has part: feature:1196716-1197199:-1:exon

XP_033853829.2
type: Protein
SIO_000068: ncbiprotein

position:1196716:-1
position: 1196716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205968:-1
position: 1205968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1205723-1205968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1204728-1204862:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1201804-1203248:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1201123-1201253:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1200104-1200200:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1198760-1198867:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1198479-1198580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1196716-1197199:-1:exon

LOC117398922
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1223007..1235301)
location: region:1223007-1235301:-1
so has part: feature:1223007-1235301:-1:exon
subclass of: SO_0000010

117398922
type: Gene
SIO_000068: ncbigene

position:1223007:-1
position: 1223007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1235301:-1
position: 1235301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1223007-1235301:-1:exon

LOC117398922
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398922
product: cerebellin-1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033998026.2
SIO_010081: LOC117398922
subclass of: SO_0000673
so part of: LOC117398922
location: complement(join(1223007..1224699,1227865..1227984,1228398..1229397,1235275..1235301))
location: region:1223007-1235301:-1
so has part: feature:1235275-1235301:-1:exon
so has part: feature:1228398-1229397:-1:exon
so has part: feature:1227865-1227984:-1:exon
so has part: feature:1223007-1224699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1235275-1235301:-1:exon

position:1235275:-1
position: 1235275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1228398-1229397:-1:exon

position:1228398:-1
position: 1228398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229397:-1
position: 1229397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1227865-1227984:-1:exon

position:1227865:-1
position: 1227865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1227984:-1
position: 1227984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1223007-1224699:-1:exon

position:1224699:-1
position: 1224699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398922
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398922
product: cerebellin-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033998024.2
SIO_010081: LOC117398922
subclass of: SO_0000673
so part of: LOC117398922
location: complement(join(1223007..1224699,1227865..1227984,1228398..1229397,1232836..1232990))
location: region:1223007-1232990:-1
so has part: feature:1232836-1232990:-1:exon
so has part: feature:1228398-1229397:-1:exon
so has part: feature:1227865-1227984:-1:exon
so has part: feature:1223007-1224699:-1:exon

position:1232990:-1
position: 1232990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1232836-1232990:-1:exon

position:1232836:-1
position: 1232836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1228398-1229397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1227865-1227984:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1223007-1224699:-1:exon

LOC117398922
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398922
product: cerebellin-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033998025.2
SIO_010081: LOC117398922
subclass of: SO_0000673
so part of: LOC117398922
location: complement(join(1223007..1224699,1227865..1227984,1228398..1229397,1230470..1230527))
location: region:1223007-1230527:-1
so has part: feature:1230470-1230527:-1:exon
so has part: feature:1228398-1229397:-1:exon
so has part: feature:1227865-1227984:-1:exon
so has part: feature:1223007-1224699:-1:exon

position:1230527:-1
position: 1230527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230470-1230527:-1:exon

position:1230470:-1
position: 1230470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1228398-1229397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1227865-1227984:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1223007-1224699:-1:exon

LOC117398922
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebellin-1-like
translation: MKLIKFSVVLILSLKFISVHSQNDTDPIVLEGKCLVVCDSTPTSEPAGTALGMSVRSGTGKVAFSAIRKTNHEPSEMSNRTMTIYFDQILVNVGNHFDPARSMFIAPRNGVYSFCFHVVKVYNRQTIQVSLVLNGWPVITAFAGDQDVTREAATNAGLMTMEKGDKAYLKLERGNLMGGWKYSTFSGFLVFPL
SIO_010081: LOC117398922
subclass of: SO_0000673
so part of: LOC117398922
location: complement(join(1224502..1224699,1227865..1227984,1228398..1228661))
location: region:1224502-1228661:-1
so has part: feature:1228398-1228661:-1:exon
so has part: feature:1227865-1227984:-1:exon
so has part: feature:1224502-1224699:-1:exon

XP_033853915.1
type: Protein
SIO_000068: ncbiprotein

position:1224502:-1
position: 1224502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1228661:-1
position: 1228661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1228398-1228661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1227865-1227984:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1224502-1224699:-1:exon

LOC117398922
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebellin-1-like
translation: MKLIKFSVVLILSLKFISVHSQNDTDPIVLEGKCLVVCDSTPTSEPAGTALGMSVRSGTGKVAFSAIRKTNHEPSEMSNRTMTIYFDQILVNVGNHFDPARSMFIAPRNGVYSFCFHVVKVYNRQTIQVSLVLNGWPVITAFAGDQDVTREAATNAGLMTMEKGDKAYLKLERGNLMGGWKYSTFSGFLVFPL
SIO_010081: LOC117398922
subclass of: SO_0000673
so part of: LOC117398922
location: complement(join(1224502..1224699,1227865..1227984,1228398..1228661))
location: region:1224502-1228661:-1
so has part: feature:1228398-1228661:-1:exon
so has part: feature:1227865-1227984:-1:exon
so has part: feature:1224502-1224699:-1:exon

XP_033853916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1228398-1228661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1227865-1227984:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1224502-1224699:-1:exon

LOC117398922
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebellin-1-like
translation: MKLIKFSVVLILSLKFISVHSQNDTDPIVLEGKCLVVCDSTPTSEPAGTALGMSVRSGTGKVAFSAIRKTNHEPSEMSNRTMTIYFDQILVNVGNHFDPARSMFIAPRNGVYSFCFHVVKVYNRQTIQVSLVLNGWPVITAFAGDQDVTREAATNAGLMTMEKGDKAYLKLERGNLMGGWKYSTFSGFLVFPL
SIO_010081: LOC117398922
subclass of: SO_0000673
so part of: LOC117398922
location: complement(join(1224502..1224699,1227865..1227984,1228398..1228661))
location: region:1224502-1228661:-1
so has part: feature:1228398-1228661:-1:exon
so has part: feature:1227865-1227984:-1:exon
so has part: feature:1224502-1224699:-1:exon

XP_033853917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1228398-1228661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1227865-1227984:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1224502-1224699:-1:exon

LOC117398848
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1265097..1351071)
location: region:1265097-1351071:-1
so has part: feature:1265097-1351071:-1:exon
subclass of: SO_0000010

117398848
type: Gene
SIO_000068: ncbigene

position:1265097:-1
position: 1265097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1351071:-1
position: 1351071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1265097-1351071:-1:exon

LOC117398848
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398848
product: nuclear factor of activated T-cells, cytoplasmic 4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033997936.2
SIO_010081: LOC117398848
subclass of: SO_0000673
so part of: LOC117398848
location: complement(join(1265097..1265653,1328953..1329762,1331156..1331282,1332738..1332793,1333008..1333148,1333360..1333532,1334845..1335044,1340868..1341030,1345017..1345977,1350890..1351071))
location: region:1265097-1351071:-1
so has part: feature:1350890-1351071:-1:exon
so has part: feature:1345017-1345977:-1:exon
so has part: feature:1340868-1341030:-1:exon
so has part: feature:1334845-1335044:-1:exon
so has part: feature:1333360-1333532:-1:exon
so has part: feature:1333008-1333148:-1:exon
so has part: feature:1332738-1332793:-1:exon
so has part: feature:1331156-1331282:-1:exon
so has part: feature:1328953-1329762:-1:exon
so has part: feature:1265097-1265653:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1350890-1351071:-1:exon

position:1350890:-1
position: 1350890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1345017-1345977:-1:exon

position:1345017:-1
position: 1345017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345977:-1
position: 1345977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1340868-1341030:-1:exon

position:1340868:-1
position: 1340868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1341030:-1
position: 1341030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1334845-1335044:-1:exon

position:1334845:-1
position: 1334845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335044:-1
position: 1335044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1333360-1333532:-1:exon

position:1333360:-1
position: 1333360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333532:-1
position: 1333532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1333008-1333148:-1:exon

position:1333008:-1
position: 1333008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333148:-1
position: 1333148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1332738-1332793:-1:exon

position:1332738:-1
position: 1332738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1332793:-1
position: 1332793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1331156-1331282:-1:exon

position:1331156:-1
position: 1331156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1331282:-1
position: 1331282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1328953-1329762:-1:exon

position:1328953:-1
position: 1328953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1329762:-1
position: 1329762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1265097-1265653:-1:exon

position:1265653:-1
position: 1265653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398848
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells, cytoplasmic 4-like isoform X2
translation: MGAAPGWEDGELEFKLVFEEDPLPGPELERGRPADVNNNRDADQERTPPSLSTNQPIQISQNRPGGGPLLPSTNNRAGMHSPPPKPTVDKEFFGTYESQPARYIQLDSSRILECPSIQITPISPQDSQEETYYCPWERTSRDHLYLHLDPFSYRDGGSLSPSSASSLSSRSWVSDASSCDSLLLGDEEELNEATSQFNLGTRPTSPRLGPLLSSPASPSSRPASPGGKRRHSGCLDSYSPLPSPSISRRGSFSEDPLSPDSSSEVPEFGFPTISGLSVPLELDNIPQKARKTSLEQGARKEDPAGSSDNGYQVIDAEEGYIQGKESYHHALGLQSGMDYLSVPSPLTWSKARMTGHRPIFRSTALPPLDWPLPSQFDPYELRVEVQPRSHHRAHYETEGSRGAVKASPGGNPIVKLLGFSEKPLSLQMFIGSADERALRPHAFYQVHRITGKMVSTASQELVLGGTKILEIPLHPENGMSANIDCAGILKLRNSDIELRKGETDIGRKNTRVRLAFRVHIPQGAGKVVSIQTASVPIECSQRSAQELPAVESCNITSCSLEGGEELVLTGSNFLPESKVIFIEKGPDGKLQWESEAQVDRDKSSESELCVEVPGYCNETASQPVQVYFYVSNGKRKRSSIQCFKYLPVMFKEPPPVPMSPLVADPSRAAQPCQSLGPEGGQYPVDYHPYYQRGEKPSNHIDYPHGYPSPRHFPLRGEFENAAVDFLDHLGYEAELGVNGLLLPHLQKPDSTPSLTWLDSPYQPTSPSSLSPYTLNSLVSSSSQSMLCGPSYPSESFEGPSLQMGYAVPQAADQAYAARRMNFRINDSFPVAQEPCLPPYPSYPYTDSSAGLASPSEKPSLPKQTSFGPESLPAPVSQGKEAGEGPQYNVEREEMKSGFEGYGPPFRNVPIQGITLEEVNEFIGENLTQFPDTNLEGRPN
SIO_010081: LOC117398848
subclass of: SO_0000673
so part of: LOC117398848
location: complement(join(1265586..1265653,1328953..1329762,1331156..1331282,1332738..1332793,1333008..1333148,1333360..1333532,1334845..1335044,1340868..1341030,1345017..1345977,1350890..1351010))
location: region:1265586-1351010:-1
so has part: feature:1350890-1351010:-1:exon
so has part: feature:1345017-1345977:-1:exon
so has part: feature:1340868-1341030:-1:exon
so has part: feature:1334845-1335044:-1:exon
so has part: feature:1333360-1333532:-1:exon
so has part: feature:1333008-1333148:-1:exon
so has part: feature:1332738-1332793:-1:exon
so has part: feature:1331156-1331282:-1:exon
so has part: feature:1328953-1329762:-1:exon
so has part: feature:1265586-1265653:-1:exon

XP_033853827.2
type: Protein
SIO_000068: ncbiprotein

position:1265586:-1
position: 1265586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1351010:-1
position: 1351010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1350890-1351010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345017-1345977:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1340868-1341030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1334845-1335044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1333360-1333532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1333008-1333148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1332738-1332793:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1331156-1331282:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1328953-1329762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1265586-1265653:-1:exon

LOC117398848
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398848
product: nuclear factor of activated T-cells, cytoplasmic 4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034914461.1
SIO_010081: LOC117398848
subclass of: SO_0000673
so part of: LOC117398848
location: complement(join(1327290..1327424,1328953..1329762,1331156..1331282,1332738..1332793,1333008..1333148,1333360..1333532,1334845..1335044,1340868..1341030,1345017..1345977,1350890..1351071))
location: region:1327290-1351071:-1
so has part: feature:1350890-1351071:-1:exon
so has part: feature:1345017-1345977:-1:exon
so has part: feature:1340868-1341030:-1:exon
so has part: feature:1334845-1335044:-1:exon
so has part: feature:1333360-1333532:-1:exon
so has part: feature:1333008-1333148:-1:exon
so has part: feature:1332738-1332793:-1:exon
so has part: feature:1331156-1331282:-1:exon
so has part: feature:1328953-1329762:-1:exon
so has part: feature:1327290-1327424:-1:exon

position:1327290:-1
position: 1327290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1350890-1351071:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345017-1345977:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1340868-1341030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1334845-1335044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1333360-1333532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1333008-1333148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1332738-1332793:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1331156-1331282:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1328953-1329762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1327290-1327424:-1:exon

position:1327424:-1
position: 1327424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398848
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398848
product: nuclear factor of activated T-cells, cytoplasmic 4-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034914462.1
SIO_010081: LOC117398848
subclass of: SO_0000673
so part of: LOC117398848
location: complement(join(1327290..1327424,1328953..1329762,1331156..1331282,1332738..1332793,1333008..1333148,1333360..1333532,1334845..1335044,1340868..1341030,1345017..1345977,1346855..1346974))
location: region:1327290-1346974:-1
so has part: feature:1346855-1346974:-1:exon
so has part: feature:1345017-1345977:-1:exon
so has part: feature:1340868-1341030:-1:exon
so has part: feature:1334845-1335044:-1:exon
so has part: feature:1333360-1333532:-1:exon
so has part: feature:1333008-1333148:-1:exon
so has part: feature:1332738-1332793:-1:exon
so has part: feature:1331156-1331282:-1:exon
so has part: feature:1328953-1329762:-1:exon
so has part: feature:1327290-1327424:-1:exon

position:1346974:-1
position: 1346974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1346855-1346974:-1:exon

position:1346855:-1
position: 1346855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1345017-1345977:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1340868-1341030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1334845-1335044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1333360-1333532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1333008-1333148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1332738-1332793:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1331156-1331282:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1328953-1329762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1327290-1327424:-1:exon

LOC117398848
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells, cytoplasmic 4-like isoform X1
translation: MGAAPGWEDGELEFKLVFEEDPLPGPELERGRPADVNNNRDADQERTPPSLSTNQPIQISQNRPGGGPLLPSTNNRAGMHSPPPKPTVDKEFFGTYESQPARYIQLDSSRILECPSIQITPISPQDSQEETYYCPWERTSRDHLYLHLDPFSYRDGGSLSPSSASSLSSRSWVSDASSCDSLLLGDEEELNEATSQFNLGTRPTSPRLGPLLSSPASPSSRPASPGGKRRHSGCLDSYSPLPSPSISRRGSFSEDPLSPDSSSEVPEFGFPTISGLSVPLELDNIPQKARKTSLEQGARKEDPAGSSDNGYQVIDAEEGYIQGKESYHHALGLQSGMDYLSVPSPLTWSKARMTGHRPIFRSTALPPLDWPLPSQFDPYELRVEVQPRSHHRAHYETEGSRGAVKASPGGNPIVKLLGFSEKPLSLQMFIGSADERALRPHAFYQVHRITGKMVSTASQELVLGGTKILEIPLHPENGMSANIDCAGILKLRNSDIELRKGETDIGRKNTRVRLAFRVHIPQGAGKVVSIQTASVPIECSQRSAQELPAVESCNITSCSLEGGEELVLTGSNFLPESKVIFIEKGPDGKLQWESEAQVDRDKSSESELCVEVPGYCNETASQPVQVYFYVSNGKRKRSSIQCFKYLPVMFKEPPPVPMSPLVADPSRAAQPCQSLGPEGGQYPVDYHPYYQRGEKPSNHIDYPHGYPSPRHFPLRGEFENAAVDFLDHLGYEAELGVNGLLLPHLQKPDSTPSLTWLDSPYQPTSPSSLSPYTLNSLVSSSSQSMLCGPSYPSESFEGPSLQMGYAVPQAADQAYAARRMNFRINDSFPVAQEPCLPPYPSYPYTDSSAGLASPSEKPSLPKQTSFGPESLPAPVSQGKEAGEGPQYNVEREEMKSGFEGYGPPFRNVPIQGITLEEVNEFIGENLTPFPDTSLEGRPN
SIO_010081: LOC117398848
subclass of: SO_0000673
so part of: LOC117398848
location: complement(join(1327357..1327424,1328953..1329762,1331156..1331282,1332738..1332793,1333008..1333148,1333360..1333532,1334845..1335044,1340868..1341030,1345017..1345977,1350890..1351010))
location: region:1327357-1351010:-1
so has part: feature:1350890-1351010:-1:exon
so has part: feature:1345017-1345977:-1:exon
so has part: feature:1340868-1341030:-1:exon
so has part: feature:1334845-1335044:-1:exon
so has part: feature:1333360-1333532:-1:exon
so has part: feature:1333008-1333148:-1:exon
so has part: feature:1332738-1332793:-1:exon
so has part: feature:1331156-1331282:-1:exon
so has part: feature:1328953-1329762:-1:exon
so has part: feature:1327357-1327424:-1:exon

XP_034770352.1
type: Protein
SIO_000068: ncbiprotein

position:1327357:-1
position: 1327357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1350890-1351010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345017-1345977:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1340868-1341030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1334845-1335044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1333360-1333532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1333008-1333148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1332738-1332793:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1331156-1331282:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1328953-1329762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1327357-1327424:-1:exon

LOC117398848
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells, cytoplasmic 4-like isoform X3
translation: MSGALVGLLYADQERTPPSLSTNQPIQISQNRPGGGPLLPSTNNRAGMHSPPPKPTVDKEFFGTYESQPARYIQLDSSRILECPSIQITPISPQDSQEETYYCPWERTSRDHLYLHLDPFSYRDGGSLSPSSASSLSSRSWVSDASSCDSLLLGDEEELNEATSQFNLGTRPTSPRLGPLLSSPASPSSRPASPGGKRRHSGCLDSYSPLPSPSISRRGSFSEDPLSPDSSSEVPEFGFPTISGLSVPLELDNIPQKARKTSLEQGARKEDPAGSSDNGYQVIDAEEGYIQGKESYHHALGLQSGMDYLSVPSPLTWSKARMTGHRPIFRSTALPPLDWPLPSQFDPYELRVEVQPRSHHRAHYETEGSRGAVKASPGGNPIVKLLGFSEKPLSLQMFIGSADERALRPHAFYQVHRITGKMVSTASQELVLGGTKILEIPLHPENGMSANIDCAGILKLRNSDIELRKGETDIGRKNTRVRLAFRVHIPQGAGKVVSIQTASVPIECSQRSAQELPAVESCNITSCSLEGGEELVLTGSNFLPESKVIFIEKGPDGKLQWESEAQVDRDKSSESELCVEVPGYCNETASQPVQVYFYVSNGKRKRSSIQCFKYLPVMFKEPPPVPMSPLVADPSRAAQPCQSLGPEGGQYPVDYHPYYQRGEKPSNHIDYPHGYPSPRHFPLRGEFENAAVDFLDHLGYEAELGVNGLLLPHLQKPDSTPSLTWLDSPYQPTSPSSLSPYTLNSLVSSSSQSMLCGPSYPSESFEGPSLQMGYAVPQAADQAYAARRMNFRINDSFPVAQEPCLPPYPSYPYTDSSAGLASPSEKPSLPKQTSFGPESLPAPVSQGKEAGEGPQYNVEREEMKSGFEGYGPPFRNVPIQGITLEEVNEFIGENLTPFPDTSLEGRPN
SIO_010081: LOC117398848
subclass of: SO_0000673
so part of: LOC117398848
location: complement(join(1327357..1327424,1328953..1329762,1331156..1331282,1332738..1332793,1333008..1333148,1333360..1333532,1334845..1335044,1340868..1341030,1345017..1345977,1346855..1346882))
location: region:1327357-1346882:-1
so has part: feature:1346855-1346882:-1:exon
so has part: feature:1345017-1345977:-1:exon
so has part: feature:1340868-1341030:-1:exon
so has part: feature:1334845-1335044:-1:exon
so has part: feature:1333360-1333532:-1:exon
so has part: feature:1333008-1333148:-1:exon
so has part: feature:1332738-1332793:-1:exon
so has part: feature:1331156-1331282:-1:exon
so has part: feature:1328953-1329762:-1:exon
so has part: feature:1327357-1327424:-1:exon

XP_034770353.1
type: Protein
SIO_000068: ncbiprotein

position:1346882:-1
position: 1346882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1346855-1346882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345017-1345977:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1340868-1341030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1334845-1335044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1333360-1333532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1333008-1333148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1332738-1332793:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1331156-1331282:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1328953-1329762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1327357-1327424:-1:exon

LOC117398887
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398887
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1369634..1386276
location: region:1369634-1386276:1
so has part: feature:1369634-1386276:1:exon
subclass of: SO_0000010

117398887
type: Gene
SIO_000068: ncbigene

position:1369634:1
position: 1369634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386276:1
position: 1386276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1369634-1386276:1:exon

LOC117398887
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398887
product: leukotriene B4 receptor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033997981.2
SIO_010081: LOC117398887
subclass of: SO_0000673
so part of: LOC117398887
location: join(1369634..1369806,1384186..1384973,1385464..1386276)
location: region:1369634-1386276:1
so has part: feature:1369634-1369806:1:exon
so has part: feature:1384186-1384973:1:exon
so has part: feature:1385464-1386276:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1369634-1369806:1:exon

position:1369806:1
position: 1369806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1384186-1384973:1:exon

position:1384186:1
position: 1384186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384973:1
position: 1384973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1385464-1386276:1:exon

position:1385464:1
position: 1385464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398887
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398887
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukotriene B4 receptor 1-like
translation: MEDNETIFPEEEESIVSNEASTIIGTLILTLVFLIGVPGNLFIIWSILFRIRKRSVTCLLILNLALADGTLMLLTPFFIVYLALQDWVFGMVLCKTLFYLCCMNMYASIFVITLLSLDRLAAVAWPHKVPVLRKKGLVIKVLIILWMMTLAFAVPAVVYRTIRSDPEGGRARENRTVCLAFHQSRGHEVFQYGFETFFGFVVPFSVIVGSYGYILRHLRSSKFQRRIRSEKLILAIVVMFGVLWLPYHVVNLIQVVAVLSPEALQSRLDHVWKSCRVVTSALAFISSCMNPVLYTFAGKGYMKTAGLNFMAKLFEGTAPDSADKKARQAKDQSPQPSKDRICQESVELQGSKDTSTVG
SIO_010081: LOC117398887
subclass of: SO_0000673
so part of: LOC117398887
location: join(1384212..1384973,1385464..1385778)
location: region:1384212-1385778:1
so has part: feature:1384212-1384973:1:exon
so has part: feature:1385464-1385778:1:exon

XP_033853872.2
type: Protein
SIO_000068: ncbiprotein

position:1384212:1
position: 1384212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385778:1
position: 1385778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1384212-1384973:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1385464-1385778:1:exon

LOC117398885
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1400802..1404408)
location: region:1400802-1404408:-1
so has part: feature:1400802-1404408:-1:exon
subclass of: SO_0000010

117398885
type: Gene
SIO_000068: ncbigene

position:1400802:-1
position: 1400802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404408:-1
position: 1404408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1400802-1404408:-1:exon

LOC117398885
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398885
product: leukotriene B4 receptor 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033997980.2
SIO_010081: LOC117398885
subclass of: SO_0000673
so part of: LOC117398885
location: complement(join(1400802..1402856,1404238..1404408))
location: region:1400802-1404408:-1
so has part: feature:1404238-1404408:-1:exon
so has part: feature:1400802-1402856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1404238-1404408:-1:exon

position:1404238:-1
position: 1404238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1400802-1402856:-1:exon

position:1402856:-1
position: 1402856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398885
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: leukotriene B4 receptor 1-like
translation: MNITATCNTTYSKGSSAIGITILTTAFTLGFPGNLFVIWTVLCRLRERSVTSILILNLAAADAVVLLTAPFFIRYLAVLNWEFGEAPCKIMHYICNVNMYASIFIIAFMSLDRLLGVSKPFLSQKVRTKPKVRRVALALWVLAFLFSIPMLFYRKVVTSKDRQWCNPVHLTRGHQVFQYLLETSASFVIPFTVMAVSYCRISLRLRKGRFRRRSRRKSSRLIILVVVSFAVFWMPYNIVNILQVAGMLASSKALEEFAAYVRPNLTALAFVSSSVNPILYAFAGSAFIRTSGLNFVAKLLEGTSSEVNSLKKSGRTLREKEEEEKSRMEDCMELAQVTNAKQTGEDAPKQDQEANTEAPNC
SIO_010081: LOC117398885
subclass of: SO_0000673
so part of: LOC117398885
location: complement(1401751..1402837)
location: region:1401751-1402837:-1
so has part: feature:1401751-1402837:-1:exon

XP_033853871.2
type: Protein
SIO_000068: ncbiprotein

position:1401751:-1
position: 1401751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1402837:-1
position: 1402837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1401751-1402837:-1:exon

LOC117398890
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1421445..1428340)
location: region:1421445-1428340:-1
so has part: feature:1421445-1428340:-1:exon
subclass of: SO_0000010

117398890
type: Gene
SIO_000068: ncbigene

position:1421445:-1
position: 1421445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428340:-1
position: 1428340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1421445-1428340:-1:exon

LOC117398890
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398890
product: leukotriene B4 receptor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033997986.2
SIO_010081: LOC117398890
subclass of: SO_0000673
so part of: LOC117398890
location: complement(join(1421445..1422658,1424303..1424833,1428215..1428340))
location: region:1421445-1428340:-1
so has part: feature:1428215-1428340:-1:exon
so has part: feature:1424303-1424833:-1:exon
so has part: feature:1421445-1422658:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1428215-1428340:-1:exon

position:1428215:-1
position: 1428215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1424303-1424833:-1:exon

position:1424303:-1
position: 1424303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1424833:-1
position: 1424833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1421445-1422658:-1:exon

position:1422658:-1
position: 1422658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukotriene B4 receptor 1-like
translation: MNFSSFPSPSLPPPPPSSSLGLSQILGTAILTLAFVLGFPGNLFVVWTVLCRVAHRSVTCLLVLNLAAADALVLLSAPFFIRYIVGGRGWEFGPAFCKLVHYLCCVNMYASIFLIAGMSLDRFLAVSRPFLSQQLRTKRALLKILLVIWSLAFLFAIPMPFYRSIFPKEGLFYCIPFHSDPKHMVFQYLMETLFGFLIPFAVIIFCYSQVGSHLQGAKFNKRRRSGRLILLIMAAFAVFWMPYHIVNLIQVSGALAGEESLKNALLGAAKIGRPDVTAFAFFSSSINPILYVFAGSSHIRSAGLNFMAKMFEGSHSEGSGSSRVFRSIKMTRNESLVEKLPEIKTLQT
SIO_010081: LOC117398890
subclass of: SO_0000673
so part of: LOC117398890
location: complement(join(1422103..1422658,1424303..1424793))
location: region:1422103-1424793:-1
so has part: feature:1424303-1424793:-1:exon
so has part: feature:1422103-1422658:-1:exon

XP_033853877.2
type: Protein
SIO_000068: ncbiprotein

position:1422103:-1
position: 1422103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1424793:-1
position: 1424793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1424303-1424793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1422103-1422658:-1:exon

trnal-uaa
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnal-uaa
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1441858..1441940
location: region:1441858-1441940:1
so has part: feature:1441858-1441940:1:exon
subclass of: SO_0000663

117399204
type: Gene
SIO_000068: ncbigene

position:1441858:1
position: 1441858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1441940:1
position: 1441940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1441858-1441940:1:exon

trnal-uaa
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnal-uaa
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon UAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1441891..1441893,aa:Leu,seq:taa)
SIO_010081: trnal-uaa
subclass of: SO_0000673
so part of: trnal-uaa
location: 1441858..1441940
location: region:1441858-1441940:1
so has part: feature:1441858-1441940:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1441858-1441940:1:exon

sdr39u1
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: sdr39u1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1443542..1448164)
location: region:1443542-1448164:-1
so has part: feature:1443542-1448164:-1:exon
subclass of: SO_0000010

117398902
type: Gene
SIO_000068: ncbigene

position:1443542:-1
position: 1443542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1448164:-1
position: 1448164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1443542-1448164:-1:exon

sdr39u1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: sdr39u1
product: short chain dehydrogenase/reductase family 39U, member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033998004.2
SIO_010081: sdr39u1
subclass of: SO_0000673
so part of: sdr39u1
location: complement(join(1443542..1443999,1445259..1445411,1445820..1445941,1446205..1446287,1446917..1447023,1448032..1448164))
location: region:1443542-1448164:-1
so has part: feature:1448032-1448164:-1:exon
so has part: feature:1446917-1447023:-1:exon
so has part: feature:1446205-1446287:-1:exon
so has part: feature:1445820-1445941:-1:exon
so has part: feature:1445259-1445411:-1:exon
so has part: feature:1443542-1443999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1448032-1448164:-1:exon

position:1448032:-1
position: 1448032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1446917-1447023:-1:exon

position:1446917:-1
position: 1446917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1447023:-1
position: 1447023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1446205-1446287:-1:exon

position:1446205:-1
position: 1446205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1446287:-1
position: 1446287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1445820-1445941:-1:exon

position:1445820:-1
position: 1445820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445941:-1
position: 1445941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1445259-1445411:-1:exon

position:1445259:-1
position: 1445259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445411:-1
position: 1445411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1443542-1443999:-1:exon

position:1443999:-1
position: 1443999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sdr39u1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: sdr39u1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epimerase family protein SDR39U1
translation: MKVVVGGGSGFVGRTLTQLLSSRGHEVTVISRQSGPGRITWDELSSKGLPPCDGAVNLAGENVLNPLRWWNEEYKKDLFSSRIDTTRTLVEAIAAAEKPPQSWVLVTGVGYYKPSQTAEYTEMSKGGDFDLLSRLVTEWETAGRLPGDKATDTRQVVVRAGAVLGKDGGAIQQMIWPFWLGLGGTLGSGCQPFPWIHVADVAGIITHALESGTGVVSGVLNGVAPADDTNATFTKALGSALRRPTLFPVPAFVVNTLLGSERAVILLQGQRVIPKRTLESGYVFKYPDLQSALKNIVS
SIO_010081: sdr39u1
subclass of: SO_0000673
so part of: sdr39u1
location: complement(join(1443584..1443999,1445259..1445411,1445820..1445941,1446205..1446287,1446917..1447023,1448032..1448047))
location: region:1443584-1448047:-1
so has part: feature:1448032-1448047:-1:exon
so has part: feature:1446917-1447023:-1:exon
so has part: feature:1446205-1446287:-1:exon
so has part: feature:1445820-1445941:-1:exon
so has part: feature:1445259-1445411:-1:exon
so has part: feature:1443584-1443999:-1:exon

XP_033853895.2
type: Protein
SIO_000068: ncbiprotein

position:1443584:-1
position: 1443584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1448047:-1
position: 1448047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1448032-1448047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1446917-1447023:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1446205-1446287:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1445820-1445941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1445259-1445411:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1443584-1443999:-1:exon

LOC117398955
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1448871..1454852
location: region:1448871-1454852:1
so has part: feature:1448871-1454852:1:exon
subclass of: SO_0000011

117398955
type: Gene
SIO_000068: ncbigene

position:1448871:1
position: 1448871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1454852:1
position: 1454852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1448871-1454852:1:exon

LOC117398955
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117398955
product: uncharacterized LOC117398955
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004544007.2
SIO_010081: LOC117398955
subclass of: SO_0000673
so part of: LOC117398955
location: join(1448871..1449240,1450716..1450741,1451321..1451342,1452509..1452540,1453121..1453142,1453833..1454852)
location: region:1448871-1454852:1
so has part: feature:1448871-1449240:1:exon
so has part: feature:1450716-1450741:1:exon
so has part: feature:1451321-1451342:1:exon
so has part: feature:1452509-1452540:1:exon
so has part: feature:1453121-1453142:1:exon
so has part: feature:1453833-1454852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1448871-1449240:1:exon

position:1449240:1
position: 1449240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1450716-1450741:1:exon

position:1450716:1
position: 1450716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1450741:1
position: 1450741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1451321-1451342:1:exon

position:1451321:1
position: 1451321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451342:1
position: 1451342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1452509-1452540:1:exon

position:1452509:1
position: 1452509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1452540:1
position: 1452540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1453121-1453142:1:exon

position:1453121:1
position: 1453121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453142:1
position: 1453142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1453833-1454852:1:exon

position:1453833:1
position: 1453833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnal-cag
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnal-cag
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1456726..1456808)
location: region:1456726-1456808:-1
so has part: feature:1456726-1456808:-1:exon
subclass of: SO_0000663

117399174
type: Gene
SIO_000068: ncbigene

position:1456726:-1
position: 1456726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1456808:-1
position: 1456808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1456726-1456808:-1:exon

trnal-cag
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnal-cag
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon CAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1456772..1456774),aa:Leu, seq:cag)
SIO_010081: trnal-cag
subclass of: SO_0000673
so part of: trnal-cag
location: complement(1456726..1456808)
location: region:1456726-1456808:-1
so has part: feature:1456726-1456808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1456726-1456808:-1:exon

LOC117398874
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1457256..1459808
location: region:1457256-1459808:1
so has part: feature:1457256-1459808:1:exon
subclass of: SO_0000010

117398874
type: Gene
SIO_000068: ncbigene

position:1457256:1
position: 1457256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1459808:1
position: 1459808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1457256-1459808:1:exon

LOC117398874
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398874
product: zinc finger protein 180-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033997969.2
SIO_010081: LOC117398874
subclass of: SO_0000673
so part of: LOC117398874
location: join(1457256..1457881,1458483..1459808)
location: region:1457256-1459808:1
so has part: feature:1457256-1457881:1:exon
so has part: feature:1458483-1459808:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1457256-1457881:1:exon

position:1457881:1
position: 1457881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1458483-1459808:1:exon

position:1458483:1
position: 1458483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398874
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 180-like
translation: MEEARVRRVCEMKEEMDICASSASLLEEELASAIEPAVKAAVLSVMSALAKFVDSKCAVFNLRLDERDQEFESVRLRLEIAESELKAMRDGEYTNTGDKNFTQSLTNTNEQYCGVDMDVLHVPELQQEEHRLVHTRTAKWRHTVEGPSERNALSHAEEGSKAGSVPIQEELFDQEWCRSPEQATELTSIEGEEETPALDPVHINEEIPGIEPVIIKEEVLELESDPIEVGGSDHFEKLQQIHTGEKLHLCLVCGKSLSTSTELKRHHRIHTGERPYCCTECGKSFNTSTDLKRHHCIHTGEKPYSCTQCGKSFKQLHHLKTHQLIHHQNKLFHCSGCEKSFTQLETLTLHQQTHTGGKPYSCTECEKSFKQASQLKAHQRIHTGEKPYHCADCGKSFILSGDLKRHQRIHTGEKPYSCDHCGKRFTLSGALTVHKQIHTGQKPYSCDHCGKRFSQAGNLMSHLRVHTGEQSTHCAQ
SIO_010081: LOC117398874
subclass of: SO_0000673
so part of: LOC117398874
location: join(1457446..1457881,1458483..1459477)
location: region:1457446-1459477:1
so has part: feature:1457446-1457881:1:exon
so has part: feature:1458483-1459477:1:exon

XP_033853860.2
type: Protein
SIO_000068: ncbiprotein

position:1457446:1
position: 1457446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1459477:1
position: 1459477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1457446-1457881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1458483-1459477:1:exon

LOC117398946
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398946
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1466041..1466471
location: region:1466041-1466471:1
so has part: feature:1466041-1466471:1:exon
subclass of: SO_0000010

117398946
type: Gene
SIO_000068: ncbigene

position:1466041:1
position: 1466041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466471:1
position: 1466471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1466041-1466471:1:exon

LOC117398946
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398946
product: histone H2A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 216 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033998045.2
SIO_010081: LOC117398946
subclass of: SO_0000673
so part of: LOC117398946
location: 1466041..1466471
location: region:1466041-1466471:1
so has part: feature:1466041-1466471:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1466041-1466471:1:exon

LOC117398946
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398946
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A-like
translation: MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLMGGVTIAQGGVLPNIQAVLLPKKTEKPAKK
SIO_010081: LOC117398946
subclass of: SO_0000673
so part of: LOC117398946
location: 1466086..1466469
location: region:1466086-1466469:1
so has part: feature:1466086-1466469:1:exon

XP_033853936.1
type: Protein
SIO_000068: ncbiprotein

position:1466086:1
position: 1466086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466469:1
position: 1466469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1466086-1466469:1:exon

LOC117398931
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398931
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1467354..1474407
location: region:1467354-1474407:1
so has part: feature:1467354-1474407:1:exon
subclass of: SO_0000010

117398931
type: Gene
SIO_000068: ncbigene

position:1467354:1
position: 1467354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1474407:1
position: 1474407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1467354-1474407:1:exon

LOC117398931
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398931
product: uncharacterized LOC117398931
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 687 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914422.1
SIO_010081: LOC117398931
subclass of: SO_0000673
so part of: LOC117398931
location: join(1467354..1467759,1469414..1469577,1469833..1469995,1470808..1470817,1471127..1471376,1473962..1474407)
location: region:1467354-1474407:1
so has part: feature:1467354-1467759:1:exon
so has part: feature:1469414-1469577:1:exon
so has part: feature:1469833-1469995:1:exon
so has part: feature:1470808-1470817:1:exon
so has part: feature:1471127-1471376:1:exon
so has part: feature:1473962-1474407:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1467354-1467759:1:exon

position:1467759:1
position: 1467759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1469414-1469577:1:exon

position:1469414:1
position: 1469414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469577:1
position: 1469577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1469833-1469995:1:exon

position:1469833:1
position: 1469833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469995:1
position: 1469995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1470808-1470817:1:exon

position:1470808:1
position: 1470808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470817:1
position: 1470817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1471127-1471376:1:exon

position:1471127:1
position: 1471127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471376:1
position: 1471376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1473962-1474407:1:exon

position:1473962:1
position: 1473962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398931
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398931
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117398931
translation: MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERAAFFAAGLAALVTFFGLGAAFAFFGLFFTTFLGLAAAFFGLLGAFFTAFGFFAFPPACRIFLSAATDSPLRSLEADTALTISSDTLGPDFLGLAAVFFLGALAGAGAAEIQLCKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTKSLKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
SIO_010081: LOC117398931
subclass of: SO_0000673
so part of: LOC117398931
location: join(1467357..1467759,1469414..1469577,1469833..1469995,1470808..1470817,1471127..1471376,1473962..1474384)
location: region:1467357-1474384:1
so has part: feature:1467357-1467759:1:exon
so has part: feature:1469414-1469577:1:exon
so has part: feature:1469833-1469995:1:exon
so has part: feature:1470808-1470817:1:exon
so has part: feature:1471127-1471376:1:exon
so has part: feature:1473962-1474384:1:exon

XP_034770313.1
type: Protein
SIO_000068: ncbiprotein

position:1467357:1
position: 1467357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1474384:1
position: 1474384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1467357-1467759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1469414-1469577:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469833-1469995:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1470808-1470817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1471127-1471376:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1473962-1474384:1:exon

LOC117398916
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398916
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1469232..1470017)
location: region:1469232-1470017:-1
so has part: feature:1469232-1470017:-1:exon
subclass of: SO_0000010

117398916
type: Gene
SIO_000068: ncbigene

position:1469232:-1
position: 1469232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1470017:-1
position: 1470017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1469232-1470017:-1:exon

LOC117398916
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398916
product: histone H1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033998018.2
SIO_010081: LOC117398916
subclass of: SO_0000673
so part of: LOC117398916
location: complement(1469232..1470017)
location: region:1469232-1470017:-1
so has part: feature:1469232-1470017:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1469232-1470017:-1:exon

LOC117398916
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398916
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H1-like
translation: MAEIAPAPAAPAPAKAPKKKTAAKPKKSGPSVSELIVKAVSASKERSGLSVAALKKILQAGGYDVEKNNSLVNRALKSLVTKETLLQTKGTGASGSFKLNKKAAEAKEKAAKKKAAPKKPAAKKAVVKKTTKKVSAKKAATPKKTPTKAKKPKAVKKAPKSPKKAAAKPKKVVKKSPKKAKAAPKPKKVTKAAKPAAKKAAPKKK
SIO_010081: LOC117398916
subclass of: SO_0000673
so part of: LOC117398916
location: complement(1469400..1470017)
location: region:1469400-1470017:-1
so has part: feature:1469400-1470017:-1:exon

XP_033853909.1
type: Protein
SIO_000068: ncbiprotein

position:1469400:-1
position: 1469400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1469400-1470017:-1:exon

LOC117398898
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1471134..1471407
location: region:1471134-1471407:1
so has part: feature:1471134-1471407:1:exon
subclass of: SO_0000010

117398898
type: Gene
SIO_000068: ncbigene

position:1471134:1
position: 1471134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471407:1
position: 1471407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471134-1471407:1:exon

LOC117398898
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398898
product: histone H4 type VIII
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914492.1
SIO_010081: LOC117398898
subclass of: SO_0000673
so part of: LOC117398898
location: 1471134..1471407
location: region:1471134-1471407:1
so has part: feature:1471134-1471407:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1471134-1471407:1:exon

LOC117398898
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398898
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: histone H4 type VIII
translation: MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMMWCMR
SIO_010081: LOC117398898
subclass of: SO_0000673
so part of: LOC117398898
location: 1471134..1471407
location: region:1471134-1471407:1
so has part: feature:1471134-1471407:1:exon

XP_034770383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1471134-1471407:1:exon

LOC117398941
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1472697..1473083
location: region:1472697-1473083:1
so has part: feature:1472697-1473083:1:exon
subclass of: SO_0000010

117398941
type: Gene
SIO_000068: ncbigene

position:1472697:1
position: 1472697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1473083:1
position: 1473083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1472697-1473083:1:exon

LOC117398941
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398941
product: histone H2A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 226 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033998041.2
SIO_010081: LOC117398941
subclass of: SO_0000673
so part of: LOC117398941
location: 1472697..1473083
location: region:1472697-1473083:1
so has part: feature:1472697-1473083:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1472697-1473083:1:exon

LOC117398941
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A-like
translation: MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLMGGVTIAQGGVLPNIQAVLLPKKTEKPAKK
SIO_010081: LOC117398941
subclass of: SO_0000673
so part of: LOC117398941
location: 1472698..1473081
location: region:1472698-1473081:1
so has part: feature:1472698-1473081:1:exon

XP_033853932.1
type: Protein
SIO_000068: ncbiprotein

position:1472698:1
position: 1472698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1473081:1
position: 1473081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1472698-1473081:1:exon

LOC117967188
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117967188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1475539..1475812)
location: region:1475539-1475812:-1
so has part: feature:1475539-1475812:-1:exon

117967188
type: Gene
SIO_000068: ncbigene

position:1475539:-1
position: 1475539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1475812:-1
position: 1475812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1475539-1475812:-1:exon

LOC117967188
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117967188
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117967188
subclass of: SO_0000673
so part of: LOC117967188
location: complement(1475539..1475812)
location: region:1475539-1475812:-1
so has part: feature:1475539-1475812:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1475539-1475812:-1:exon

LOC117398920
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1476921..1477704
location: region:1476921-1477704:1
so has part: feature:1476921-1477704:1:exon
subclass of: SO_0000010

117398920
type: Gene
SIO_000068: ncbigene

position:1476921:1
position: 1476921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1477704:1
position: 1477704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1476921-1477704:1:exon

LOC117398920
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398920
product: histone H1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033998022.2
SIO_010081: LOC117398920
subclass of: SO_0000673
so part of: LOC117398920
location: 1476921..1477704
location: region:1476921-1477704:1
so has part: feature:1476921-1477704:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1476921-1477704:1:exon

LOC117398920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H1-like
translation: MAEIAPAPAALAPAKAPKKKTAAKPKKSGPSVSELIVKAVSASKERSGLSVAALKKILQAGGYDVEKNNSLVNRALKSLVTKETLLQTKGTGASGSFKLNKKAAEAKEKAAKKKAAPKKPAAKKAVVKKTTKKVSAKKAATPKKTPTKAKKPKAVKKAPKSPKKAAAKPKKVVKKSPKKAKAAPKPKKVTKAAKPAAKKAAPKKK
SIO_010081: LOC117398920
subclass of: SO_0000673
so part of: LOC117398920
location: 1476921..1477538
location: region:1476921-1477538:1
so has part: feature:1476921-1477538:1:exon

XP_033853913.2
type: Protein
SIO_000068: ncbiprotein

position:1477538:1
position: 1477538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1476921-1477538:1:exon

LOC117398981
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398981
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1478665..1479084)
location: region:1478665-1479084:-1
so has part: feature:1478665-1479084:-1:exon
subclass of: SO_0000010

117398981
type: Gene
SIO_000068: ncbigene

position:1478665:-1
position: 1478665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1479084:-1
position: 1479084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1478665-1479084:-1:exon

LOC117398981
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398981
product: histone H3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 511 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914486.1
SIO_010081: LOC117398981
subclass of: SO_0000673
so part of: LOC117398981
location: complement(1478665..1479084)
location: region:1478665-1479084:-1
so has part: feature:1478665-1479084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1478665-1479084:-1:exon

LOC117398981
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398981
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H3
translation: MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
SIO_010081: LOC117398981
subclass of: SO_0000673
so part of: LOC117398981
location: complement(1478667..1479077)
location: region:1478667-1479077:-1
so has part: feature:1478667-1479077:-1:exon

XP_034770377.1
type: Protein
SIO_000068: ncbiprotein

position:1478667:-1
position: 1478667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1479077:-1
position: 1479077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1478667-1479077:-1:exon

LOC117398934
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1479748..1480182)
location: region:1479748-1480182:-1
so has part: feature:1479748-1480182:-1:exon
subclass of: SO_0000010

117398934
type: Gene
SIO_000068: ncbigene

position:1479748:-1
position: 1479748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480182:-1
position: 1480182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1479748-1480182:-1:exon

LOC117398934
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398934
product: histone H2A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 220 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033998035.2
SIO_010081: LOC117398934
subclass of: SO_0000673
so part of: LOC117398934
location: complement(1479748..1480182)
location: region:1479748-1480182:-1
so has part: feature:1479748-1480182:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1479748-1480182:-1:exon

LOC117398934
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A-like
translation: MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLMGGVTIAQGGVLPNIQAVLLPKKTEKPAKK
SIO_010081: LOC117398934
subclass of: SO_0000673
so part of: LOC117398934
location: complement(1479799..1480182)
location: region:1479799-1480182:-1
so has part: feature:1479799-1480182:-1:exon

XP_033853926.2
type: Protein
SIO_000068: ncbiprotein

position:1479799:-1
position: 1479799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1479799-1480182:-1:exon

LOC117398856
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1488706..1494737)
location: region:1488706-1494737:-1
so has part: feature:1488706-1494737:-1:exon
subclass of: SO_0000010

117398856
type: Gene
SIO_000068: ncbigene

position:1488706:-1
position: 1488706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494737:-1
position: 1494737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1488706-1494737:-1:exon

LOC117398856
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398856
product: zinc finger protein 180-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033997948.2
SIO_010081: LOC117398856
subclass of: SO_0000673
so part of: LOC117398856
location: complement(join(1488706..1490844,1494158..1494737))
location: region:1488706-1494737:-1
so has part: feature:1494158-1494737:-1:exon
so has part: feature:1488706-1490844:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1494158-1494737:-1:exon

position:1494158:-1
position: 1494158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1488706-1490844:-1:exon

position:1490844:-1
position: 1490844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398856
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 180-like
translation: MEEARVRRVCEMKEEMDICASSASLLEEELASAIEPAVKAAVLSVMSALAKFVDSKCTVFNLRLDERDQEFESVRLRLEIAESELKAMRDGEYTNTGDKNFTQSLTNTNEQYCGVDMDVLHVPELQQEEHRLVHTGTAEWRHTVEGPAERNALPHAEEGSKAESVPIQEELFDQEWCTSPEQATELTSIEGEEETPALDPVHINEEIPGIEPVIIKEEVLELESDPIEEGGSDHFEREQQIHSGEKLHLCTVCGKSLSTSTELKRHHRIHTGERPYCCTECGKSFSTSTELKRHNRFHTGEKLHHLKTQQQIHYGKKLYHCSGYEKSFSQLGALTLHQRMHTGGKLNRYTDCAKDFSQAAELKIQKRSHTGEKPYRCTECEKSFKQASQLKAHQRIHTGEKPYSCDYCGKRFILSGDLKRHQQTHTGEKPYSCDHCGKRFTLSGALTVHQRIHTGEKPYSCTECEKSFKQISHLKAHQRIHTGEKPYSCDHCGKSFTRAGNLVSHLRVHTGEQSTLCSIKDTFYFPLPVEKAHSIQTLH
SIO_010081: LOC117398856
subclass of: SO_0000673
so part of: LOC117398856
location: complement(join(1489661..1490844,1494158..1494593))
location: region:1489661-1494593:-1
so has part: feature:1494158-1494593:-1:exon
so has part: feature:1489661-1490844:-1:exon

XP_033853839.2
type: Protein
SIO_000068: ncbiprotein

position:1489661:-1
position: 1489661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494593:-1
position: 1494593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1494158-1494593:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1489661-1490844:-1:exon

LOC117398944
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1501000..1501393
location: region:1501000-1501393:1
so has part: feature:1501000-1501393:1:exon
subclass of: SO_0000010

117398944
type: Gene
SIO_000068: ncbigene

position:1501000:1
position: 1501000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1501393:1
position: 1501393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1501000-1501393:1:exon

LOC117398944
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398944
product: histone H2A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 203 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033998044.2
SIO_010081: LOC117398944
subclass of: SO_0000673
so part of: LOC117398944
location: 1501000..1501393
location: region:1501000-1501393:1
so has part: feature:1501000-1501393:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1501000-1501393:1:exon

LOC117398944
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A-like
translation: MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLMGGVTIAQGGVLPNIQAVLLPKKTEKPAKK
SIO_010081: LOC117398944
subclass of: SO_0000673
so part of: LOC117398944
location: 1501000..1501383
location: region:1501000-1501383:1
so has part: feature:1501000-1501383:1:exon

XP_033853935.1
type: Protein
SIO_000068: ncbiprotein

position:1501383:1
position: 1501383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1501000-1501383:1:exon

LOC117398900
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1502224..1512165
location: region:1502224-1512165:1
so has part: feature:1502224-1512165:1:exon
subclass of: SO_0000010

117398900
type: Gene
SIO_000068: ncbigene

position:1502224:1
position: 1502224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1512165:1
position: 1512165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1502224-1512165:1:exon

LOC117398900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398900
product: uncharacterized LOC117398900
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 742 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914423.1
SIO_010081: LOC117398900
subclass of: SO_0000673
so part of: LOC117398900
location: join(1502224..1502636,1503460..1503623,1503879..1504041,1504703..1504733,1507056..1507345,1510170..1510216,1511755..1512165)
location: region:1502224-1512165:1
so has part: feature:1502224-1502636:1:exon
so has part: feature:1503460-1503623:1:exon
so has part: feature:1503879-1504041:1:exon
so has part: feature:1504703-1504733:1:exon
so has part: feature:1507056-1507345:1:exon
so has part: feature:1510170-1510216:1:exon
so has part: feature:1511755-1512165:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1502224-1502636:1:exon

position:1502636:1
position: 1502636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1503460-1503623:1:exon

position:1503460:1
position: 1503460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1503623:1
position: 1503623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1503879-1504041:1:exon

position:1503879:1
position: 1503879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1504041:1
position: 1504041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1504703-1504733:1:exon

position:1504703:1
position: 1504703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1504733:1
position: 1504733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1507056-1507345:1:exon

position:1507056:1
position: 1507056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1507345:1
position: 1507345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1510170-1510216:1:exon

position:1510170:1
position: 1510170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1510216:1
position: 1510216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1511755-1512165:1:exon

position:1511755:1
position: 1511755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117398900
translation: MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERAAFFAAGLAALVTFLGLGAAFAFFGLFFTTFLGLAAAFFGLLGAFFTAFGFFAFPPACRIFLSAATDSPLRSLEADTALTMSSDTLGPDFLGLAAVFFLGALAGAGAAVKLNWLYPGILYNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQAQQADGRRHHRSGRSAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
SIO_010081: LOC117398900
subclass of: SO_0000673
so part of: LOC117398900
location: join(1502234..1502636,1503460..1503623,1503879..1504041,1504703..1504733,1507056..1507345,1510170..1510216,1511755..1512165)
location: region:1502234-1512165:1
so has part: feature:1502234-1502636:1:exon
so has part: feature:1503460-1503623:1:exon
so has part: feature:1503879-1504041:1:exon
so has part: feature:1504703-1504733:1:exon
so has part: feature:1507056-1507345:1:exon
so has part: feature:1510170-1510216:1:exon
so has part: feature:1511755-1512165:1:exon

XP_034770314.1
type: Protein
SIO_000068: ncbiprotein

position:1502234:1
position: 1502234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1502234-1502636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1503460-1503623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1503879-1504041:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1504703-1504733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1507056-1507345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1510170-1510216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1511755-1512165:1:exon

LOC117398910
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398910
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1503121..1504074)
location: region:1503121-1504074:-1
so has part: feature:1503121-1504074:-1:exon
subclass of: SO_0000010

117398910
type: Gene
SIO_000068: ncbigene

position:1503121:-1
position: 1503121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1504074:-1
position: 1504074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1503121-1504074:-1:exon

LOC117398910
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398910
product: histone H1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033998012.2
SIO_010081: LOC117398910
subclass of: SO_0000673
so part of: LOC117398910
location: complement(1503121..1504074)
location: region:1503121-1504074:-1
so has part: feature:1503121-1504074:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1503121-1504074:-1:exon

LOC117398910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398910
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H1-like
translation: MAEAAPAPAAPAPAKAPKKKTAAKPKKSGPSVSELIVKAVSASKERSGLSVAALKKILQAGGYDVEKNNSLVNRALKSLVTKETLLQTKGTGASGSFKLNKKAAEAKEKAAKKKAAPKKPAAKKAVVKKTTKKVSAKKAATPKKTPTKAKKPKAVKKAPKSPKKAAAKPKKVVKKSPKKAKAAPKPKKVTKAAKPAAKKAAPKKK
SIO_010081: LOC117398910
subclass of: SO_0000673
so part of: LOC117398910
location: complement(1503446..1504063)
location: region:1503446-1504063:-1
so has part: feature:1503446-1504063:-1:exon

XP_033853903.2
type: Protein
SIO_000068: ncbiprotein

position:1503446:-1
position: 1503446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1504063:-1
position: 1504063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1503446-1504063:-1:exon

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1507950..1508037
location: region:1507950-1508037:1
so has part: feature:1507950-1508037:1:exon
subclass of: SO_0000663

117967199
type: Gene
SIO_000068: ncbigene

position:1507950:1
position: 1507950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1508037:1
position: 1508037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1507950-1508037:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1507983..1507985,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(1507950..1507986,1508002..1508037)
location: region:1507950-1508037:1
so has part: feature:1507950-1507986:1:exon
so has part: feature:1508002-1508037:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1507950-1507986:1:exon

position:1507986:1
position: 1507986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1508002-1508037:1:exon

position:1508002:1
position: 1508002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnad-guc
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnad-guc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1508640..1508711)
location: region:1508640-1508711:-1
so has part: feature:1508640-1508711:-1:exon
subclass of: SO_0000663

117399173
type: Gene
SIO_000068: ncbigene

position:1508640:-1
position: 1508640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1508711:-1
position: 1508711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1508640-1508711:-1:exon

trnad-guc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnad-guc
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1508676..1508678),aa:Asp, seq:gtc)
SIO_010081: trnad-guc
subclass of: SO_0000673
so part of: trnad-guc
location: complement(1508640..1508711)
location: region:1508640-1508711:-1
so has part: feature:1508640-1508711:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1508640-1508711:-1:exon

LOC117967179
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117967179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1512929..1513636)
location: region:1512929-1513636:-1
so has part: feature:1512929-1513636:-1:exon
subclass of: SO_0000010

117967179
type: Gene
SIO_000068: ncbigene

position:1512929:-1
position: 1512929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1513636:-1
position: 1513636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1512929-1513636:-1:exon

LOC117967179
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117967179
product: histone H1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914482.1
SIO_010081: LOC117967179
subclass of: SO_0000673
so part of: LOC117967179
location: complement(1512929..1513636)
location: region:1512929-1513636:-1
so has part: feature:1512929-1513636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1512929-1513636:-1:exon

LOC117967179
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117967179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H1-like
translation: MAETAPAPAAPAPAKAPKKKTAAKPKKSGPSVSELIVKAVSASKERSGLSVAALKKILQAGGYDVEKNNSLVNRALKSLVTKETLLQTKGTGASGSFKLNKKAAEAKEKAAKKKAAPKKPAAKKAVVKKTTKKVSAKKAATPKKTPTKAKKPKAVKKAPKSPKKAAAKPKKVVKKSPKKAKAAPKPKKVTKAAKPAAKKAATKKK
SIO_010081: LOC117967179
subclass of: SO_0000673
so part of: LOC117967179
location: complement(1512962..1513579)
location: region:1512962-1513579:-1
so has part: feature:1512962-1513579:-1:exon

XP_034770373.1
type: Protein
SIO_000068: ncbiprotein

position:1512962:-1
position: 1512962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1513579:-1
position: 1513579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1512962-1513579:-1:exon

LOC117967152
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117967152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1516940..1517251
location: region:1516940-1517251:1
so has part: feature:1516940-1517251:1:exon
subclass of: SO_0000010

117967152
type: Gene
SIO_000068: ncbigene

position:1516940:1
position: 1516940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1517251:1
position: 1517251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1516940-1517251:1:exon

LOC117967152
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117967152
product: histone H4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins
transcript id: XM_034914424.1
SIO_010081: LOC117967152
subclass of: SO_0000673
so part of: LOC117967152
location: 1516940..1517251
location: region:1516940-1517251:1
so has part: feature:1516940-1517251:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1516940-1517251:1:exon

LOC117967152
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117967152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H4
translation: MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
SIO_010081: LOC117967152
subclass of: SO_0000673
so part of: LOC117967152
location: 1516940..1517251
location: region:1516940-1517251:1
so has part: feature:1516940-1517251:1:exon

XP_034770315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1516940-1517251:1:exon

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1517843..1517930
location: region:1517843-1517930:1
so has part: feature:1517843-1517930:1:exon
subclass of: SO_0000663

117399203
type: Gene
SIO_000068: ncbigene

position:1517843:1
position: 1517843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1517930:1
position: 1517930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1517843-1517930:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1517876..1517878,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(1517843..1517879,1517895..1517930)
location: region:1517843-1517930:1
so has part: feature:1517843-1517879:1:exon
so has part: feature:1517895-1517930:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1517843-1517879:1:exon

position:1517879:1
position: 1517879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1517895-1517930:1:exon

position:1517895:1
position: 1517895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117967184
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117967184
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1519811..1520209
location: region:1519811-1520209:1
so has part: feature:1519811-1520209:1:exon
subclass of: SO_0000010

117967184
type: Gene
SIO_000068: ncbigene

position:1519811:1
position: 1519811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1520209:1
position: 1520209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1519811-1520209:1:exon

LOC117967184
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117967184
product: histone H2A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 175 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914490.1
SIO_010081: LOC117967184
subclass of: SO_0000673
so part of: LOC117967184
location: 1519811..1520209
location: region:1519811-1520209:1
so has part: feature:1519811-1520209:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1519811-1520209:1:exon

LOC117967184
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117967184
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A-like
translation: MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLMGGVTIAQGGVLPNIQAVLLPKKTEKPAKK
SIO_010081: LOC117967184
subclass of: SO_0000673
so part of: LOC117967184
location: 1519811..1520194
location: region:1519811-1520194:1
so has part: feature:1519811-1520194:1:exon

XP_034770381.1
type: Protein
SIO_000068: ncbiprotein

position:1520194:1
position: 1520194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1519811-1520194:1:exon

LOC117967153
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117967153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1525246..1529813
location: region:1525246-1529813:1
so has part: feature:1525246-1529813:1:exon
subclass of: SO_0000010

117967153
type: Gene
SIO_000068: ncbigene

position:1525246:1
position: 1525246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529813:1
position: 1529813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1525246-1529813:1:exon

LOC117967153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117967153
product: histone H3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 701 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914425.1
SIO_010081: LOC117967153
subclass of: SO_0000673
so part of: LOC117967153
location: join(1525246..1525647,1529394..1529813)
location: region:1525246-1529813:1
so has part: feature:1525246-1525647:1:exon
so has part: feature:1529394-1529813:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1525246-1525647:1:exon

position:1525647:1
position: 1525647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1529394-1529813:1:exon

position:1529394:1
position: 1529394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117967153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117967153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H3-like
translation: MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGSLKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
SIO_010081: LOC117967153
subclass of: SO_0000673
so part of: LOC117967153
location: join(1525249..1525647,1529394..1529813)
location: region:1525249-1529813:1
so has part: feature:1525249-1525647:1:exon
so has part: feature:1529394-1529813:1:exon

XP_034770316.1
type: Protein
SIO_000068: ncbiprotein

position:1525249:1
position: 1525249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1525249-1525647:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1529394-1529813:1:exon

LOC117967177
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117967177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1530540..1531232)
location: region:1530540-1531232:-1
so has part: feature:1530540-1531232:-1:exon
subclass of: SO_0000010

117967177
type: Gene
SIO_000068: ncbigene

position:1530540:-1
position: 1530540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1531232:-1
position: 1531232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1530540-1531232:-1:exon

LOC117967177
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117967177
product: histone H1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914479.1
SIO_010081: LOC117967177
subclass of: SO_0000673
so part of: LOC117967177
location: complement(1530540..1531232)
location: region:1530540-1531232:-1
so has part: feature:1530540-1531232:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1530540-1531232:-1:exon

LOC117967177
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117967177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H1-like
translation: MAETAPAPAAPAPAKAPKKKTAAKPKKSGPSVSELIVKAMSASKERSGLSVAALKKILQAGGYDVEKNNSLVNRALKSLVTKETLLQTKGTGASGSFKLNKKAAEAKEKAAKKKAAPKKPAAKKAVVKKTTKKVSAKKAATPKKTPTKAKKPKAVKKAPKSPKKAAAKPKKVVKKSPKKAKAAPKPKKVTKAAKPAAKKAAPKKK
SIO_010081: LOC117967177
subclass of: SO_0000673
so part of: LOC117967177
location: complement(1530615..1531232)
location: region:1530615-1531232:-1
so has part: feature:1530615-1531232:-1:exon

XP_034770370.1
type: Protein
SIO_000068: ncbiprotein

position:1530615:-1
position: 1530615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1530615-1531232:-1:exon

LOC117398948
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1532788..1574944
location: region:1532788-1574944:1
so has part: feature:1532788-1574944:1:exon

117398948
type: Gene
SIO_000068: ncbigene

position:1532788:1
position: 1532788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1574944:1
position: 1574944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1532788-1574944:1:exon

LOC117398948
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398948
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 431 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398948
subclass of: SO_0000673
so part of: LOC117398948
location: 1532788..1533069
location: region:1532788-1533069:1
so has part: feature:1532788-1533069:1:exon

position:1533069:1
position: 1533069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1532788-1533069:1:exon

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1533666..1533753
location: region:1533666-1533753:1
so has part: feature:1533666-1533753:1:exon
subclass of: SO_0000663

117967202
type: Gene
SIO_000068: ncbigene

position:1533666:1
position: 1533666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1533753:1
position: 1533753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1533666-1533753:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1533699..1533701,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(1533666..1533702,1533718..1533753)
location: region:1533666-1533753:1
so has part: feature:1533666-1533702:1:exon
so has part: feature:1533718-1533753:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1533666-1533702:1:exon

position:1533702:1
position: 1533702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1533718-1533753:1:exon

position:1533718:1
position: 1533718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398893
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1537504..1565671)
location: region:1537504-1565671:-1
so has part: feature:1537504-1565671:-1:exon
subclass of: SO_0000010

117398893
type: Gene
SIO_000068: ncbigene

position:1537504:-1
position: 1537504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565671:-1
position: 1565671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1537504-1565671:-1:exon

LOC117398893
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398893
product: zinc finger protein 883-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034914467.1
SIO_010081: LOC117398893
subclass of: SO_0000673
so part of: LOC117398893
location: complement(join(1537504..1538883,1565065..1565671))
location: region:1537504-1565671:-1
so has part: feature:1565065-1565671:-1:exon
so has part: feature:1537504-1538883:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1565065-1565671:-1:exon

position:1565065:-1
position: 1565065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1537504-1538883:-1:exon

position:1538883:-1
position: 1538883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398893
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398893
product: zinc finger protein 883-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034914466.1
SIO_010081: LOC117398893
subclass of: SO_0000673
so part of: LOC117398893
location: complement(join(1537504..1538883,1560569..1561308))
location: region:1537504-1561308:-1
so has part: feature:1560569-1561308:-1:exon
so has part: feature:1537504-1538883:-1:exon

position:1561308:-1
position: 1561308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1560569-1561308:-1:exon

position:1560569:-1
position: 1560569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1537504-1538883:-1:exon

LOC117398893
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 883-like isoform X2
translation: MEEARVRRVCEMKEEMDICASSASLLEEELASAIEPAVKAAVLSVVSALAKFVDSKCAVFNLRLDERDQEFESVRLRLEIAESELKAMRDREYTNTGDKNFTQSLTNTNEQYCGVDIDVIHVPELQQEEHRLVHTRTAEWRHTVEGPAERNALPHAEEGSKAESVPIQEELFDQEWCRSPEQPTELTSIEGEEEKPALDPVHINEEIPGIEPVIIKEEVLELESDPIEEGGTDHFESQQQIHMGEKLHLCTVCGKSLSTSTELKRHHRIHTGERPYCCTECGRSFNTSTDLKRHHRIHTGEKPYSCAQCGMGFKQLHHLKTHQQTHYRKKLFHCSGCEKSFTQLETLTLHQQTHTGGKPYSCTECEKSFKQASQLKAHQLIHLGHKQYPCSDCGESFILSTDLERHQQTHTGGKPYSCTECEKSFKQASQLKAHQRIHTGEKPYHCAYCGKSFILSGDLKRHQQTHTGEKPYSCDHCGKRFTRSGALTVHKRIHTGEKPYSCDHCGKRFNRTEHLVSHLRVHTGEQSAHCAQ
SIO_010081: LOC117398893
subclass of: SO_0000673
so part of: LOC117398893
location: complement(join(1537721..1538883,1565065..1565500))
location: region:1537721-1565500:-1
so has part: feature:1565065-1565500:-1:exon
so has part: feature:1537721-1538883:-1:exon

XP_034770358.1
type: Protein
SIO_000068: ncbiprotein

position:1537721:-1
position: 1537721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565500:-1
position: 1565500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1565065-1565500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1537721-1538883:-1:exon

LOC117398893
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 883-like isoform X1
translation: MEEARVRRVCEMKEEMDICASSASLLEEELASAIEPAVKAAVLSVMSALAKFVDSKCAVFNLRLDERDQEFESVRLRLEIAESELKSIRDGEYTNTGEKNFTQSLTNTDTQYHRSDSIIAQGLSARIFSTLPVQPVRDSVPAVHTALKNSRVLIQEDGSYSEQDLLMRGDDSEQRDHTSTAGWRRALKGPAERNALPHAEEGSKAESVPIQEELFDQEWCRSPEQPTELTSIEGEEEKPALDPVHINEEIPGIEPVIIKEEVLELESDPIEEGGTDHFESQQQIHMGEKLHLCTVCGKSLSTSTELKRHHRIHTGERPYCCTECGRSFNTSTDLKRHHRIHTGEKPYSCAQCGMGFKQLHHLKTHQQTHYRKKLFHCSGCEKSFTQLETLTLHQQTHTGGKPYSCTECEKSFKQASQLKAHQLIHLGHKQYPCSDCGESFILSTDLERHQQTHTGGKPYSCTECEKSFKQASQLKAHQRIHTGEKPYHCAYCGKSFILSGDLKRHQQTHTGEKPYSCDHCGKRFTRSGALTVHKRIHTGEKPYSCDHCGKRFNRTEHLVSHLRVHTGEQSAHCAQ
SIO_010081: LOC117398893
subclass of: SO_0000673
so part of: LOC117398893
location: complement(join(1537721..1538883,1560569..1561133))
location: region:1537721-1561133:-1
so has part: feature:1560569-1561133:-1:exon
so has part: feature:1537721-1538883:-1:exon

XP_034770357.1
type: Protein
SIO_000068: ncbiprotein

position:1561133:-1
position: 1561133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1560569-1561133:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1537721-1538883:-1:exon

LOC117398956
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1539667..1544896)
location: region:1539667-1544896:-1
so has part: feature:1539667-1544896:-1:exon
subclass of: SO_0000011

117398956
type: Gene
SIO_000068: ncbigene

position:1539667:-1
position: 1539667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1544896:-1
position: 1544896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1539667-1544896:-1:exon

LOC117398956
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117398956
product: uncharacterized LOC117398956
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004661888.1
SIO_010081: LOC117398956
subclass of: SO_0000673
so part of: LOC117398956
location: complement(join(1539667..1540875,1541827..1544896))
location: region:1539667-1544896:-1
so has part: feature:1541827-1544896:-1:exon
so has part: feature:1539667-1540875:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1541827-1544896:-1:exon

position:1541827:-1
position: 1541827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1539667-1540875:-1:exon

position:1540875:-1
position: 1540875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

trnal-cag
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnal-cag
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1548658..1548740
location: region:1548658-1548740:1
so has part: feature:1548658-1548740:1:exon
subclass of: SO_0000663

117399172
type: Gene
SIO_000068: ncbigene

position:1548658:1
position: 1548658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1548740:1
position: 1548740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1548658-1548740:1:exon

trnal-cag
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnal-cag
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon CAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1548692..1548694,aa:Leu,seq:cag)
SIO_010081: trnal-cag
subclass of: SO_0000673
so part of: trnal-cag
location: 1548658..1548740
location: region:1548658-1548740:1
so has part: feature:1548658-1548740:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1548658-1548740:1:exon

LOC117967190
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117967190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1550532..1550846)
location: region:1550532-1550846:-1
so has part: feature:1550532-1550846:-1:exon
subclass of: SO_0000010

117967190
type: Gene
SIO_000068: ncbigene

position:1550532:-1
position: 1550532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1550846:-1
position: 1550846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1550532-1550846:-1:exon

LOC117967190
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117967190
product: histone H4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 327 Proteins
transcript id: XM_034914495.1
SIO_010081: LOC117967190
subclass of: SO_0000673
so part of: LOC117967190
location: complement(1550532..1550846)
location: region:1550532-1550846:-1
so has part: feature:1550532-1550846:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1550532-1550846:-1:exon

LOC117967190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117967190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H4
translation: MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
SIO_010081: LOC117967190
subclass of: SO_0000673
so part of: LOC117967190
location: complement(1550532..1550843)
location: region:1550532-1550843:-1
so has part: feature:1550532-1550843:-1:exon

XP_034770386.1
type: Protein
SIO_000068: ncbiprotein

position:1550843:-1
position: 1550843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1550532-1550843:-1:exon

LOC117398927
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398927
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1553502..1553914)
location: region:1553502-1553914:-1
so has part: feature:1553502-1553914:-1:exon
subclass of: SO_0000010

117398927
type: Gene
SIO_000068: ncbigene

position:1553502:-1
position: 1553502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1553914:-1
position: 1553914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1553502-1553914:-1:exon

LOC117398927
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398927
product: histone H3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 454 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033998029.2
SIO_010081: LOC117398927
subclass of: SO_0000673
so part of: LOC117398927
location: complement(1553502..1553914)
location: region:1553502-1553914:-1
so has part: feature:1553502-1553914:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1553502-1553914:-1:exon

LOC117398927
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398927
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H3
translation: MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
SIO_010081: LOC117398927
subclass of: SO_0000673
so part of: LOC117398927
location: complement(1553502..1553912)
location: region:1553502-1553912:-1
so has part: feature:1553502-1553912:-1:exon

XP_033853920.1
type: Protein
SIO_000068: ncbiprotein

position:1553912:-1
position: 1553912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1553502-1553912:-1:exon

LOC117398893
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398893
product: zinc finger protein 883-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034914468.1
SIO_010081: LOC117398893
subclass of: SO_0000673
so part of: LOC117398893
location: complement(join(1559151..1559426,1560569..1561308))
location: region:1559151-1561308:-1
so has part: feature:1560569-1561308:-1:exon
so has part: feature:1559151-1559426:-1:exon

position:1559151:-1
position: 1559151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1560569-1561308:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1559151-1559426:-1:exon

position:1559426:-1
position: 1559426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398893
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117398893 isoform X4
translation: MEEARVRRVCEMKEEMDICASSASLLEEELASAIEPAVKAAVLSVMSALAKFVDSKCAVFNLRLDERDQEFESVRLRLEIAESELKSIRDGEYTNTGEKNFTQSLTNTDTQYHRSDSIIAQGLSARIFSTLPVQPVRDSVPAVHTALKNSRVLIQEDGSYSEQDLLMRGDDSEQRDHTSTAGWRRALKEEQEDGRL
SIO_010081: LOC117398893
subclass of: SO_0000673
so part of: LOC117398893
location: complement(join(1559401..1559426,1560569..1561133))
location: region:1559401-1561133:-1
so has part: feature:1560569-1561133:-1:exon
so has part: feature:1559401-1559426:-1:exon

XP_034770359.1
type: Protein
SIO_000068: ncbiprotein

position:1559401:-1
position: 1559401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1560569-1561133:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1559401-1559426:-1:exon

LOC117398893
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398893
product: zinc finger protein 883-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033997992.2
SIO_010081: LOC117398893
subclass of: SO_0000673
so part of: LOC117398893
location: complement(join(1563485..1564414,1565065..1565671))
location: region:1563485-1565671:-1
so has part: feature:1565065-1565671:-1:exon
so has part: feature:1563485-1564414:-1:exon

position:1563485:-1
position: 1563485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1565065-1565671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1563485-1564414:-1:exon

position:1564414:-1
position: 1564414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398893
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and SCAN domain-containing protein 12-like isoform X3
translation: MEEARVRRVCEMKEEMDICASSASLLEEELASAIEPAVKAAVLSVVSALAKFVDSKCAVFNLRLDERDQEFESVRLRLEIAESELKAMRDREYTNTGDKNFTQSLTNTNEQYCGVDIDVIHVPELQQEEHRLVHTRTAEWRHTVEGPVERNALPHAEEGSKTESVPIQEELFDQEWCRSPKQATELTSIDGEDETHALDPVHINEEIREIEPVIIKEEVLELESDPIEEGCSDHFERQQQIHMGQKLHLCTVCGKSLSTSTELKRHHRIHTGERPYCCTECGKSFNTSTDLKRHHRIHTGEKPYSCTQCEKSFKRLHHLKSHQRIHYRKKPVSL
SIO_010081: LOC117398893
subclass of: SO_0000673
so part of: LOC117398893
location: complement(join(1563846..1564414,1565065..1565500))
location: region:1563846-1565500:-1
so has part: feature:1565065-1565500:-1:exon
so has part: feature:1563846-1564414:-1:exon

XP_033853883.2
type: Protein
SIO_000068: ncbiprotein

position:1563846:-1
position: 1563846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1565065-1565500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1563846-1564414:-1:exon

LOC117398948
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398948
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 431 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398948
subclass of: SO_0000673
so part of: LOC117398948
location: 1570320..1570366
location: region:1570320-1570366:1
so has part: feature:1570320-1570366:1:exon

position:1570320:1
position: 1570320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1570366:1
position: 1570366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1570320-1570366:1:exon

LOC117398948
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398948
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 431 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398948
subclass of: SO_0000673
so part of: LOC117398948
location: 1571524..1571852
location: region:1571524-1571852:1
so has part: feature:1571524-1571852:1:exon

position:1571524:1
position: 1571524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1571852:1
position: 1571852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1571524-1571852:1:exon

LOC117398917
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1572217..1573126)
location: region:1572217-1573126:-1
so has part: feature:1572217-1573126:-1:exon
subclass of: SO_0000010

117398917
type: Gene
SIO_000068: ncbigene

position:1572217:-1
position: 1572217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1573126:-1
position: 1573126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1572217-1573126:-1:exon

LOC117398917
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398917
product: histone H1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033998019.2
SIO_010081: LOC117398917
subclass of: SO_0000673
so part of: LOC117398917
location: complement(1572217..1573126)
location: region:1572217-1573126:-1
so has part: feature:1572217-1573126:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1572217-1573126:-1:exon

LOC117398917
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H1-like
translation: MAEAAPAPAAPAPAKAPKKKTAAKPKKSGPSVSELIVKAVSASKERSGLSVAALKKILQAGGYDVEKNNSLVNRALKSLVTKETLLQTKGTGASGSFKLNKKAAEAKEKAAKKKAAPKKPAAKKAVVKKTTKKVSAKKAATPKKTPTKAKKPKAVKKAPKSPKKAAAKPKKVVKKSPKKAKAAPKPKKVTKAAKPAAKKAAPKKK
SIO_010081: LOC117398917
subclass of: SO_0000673
so part of: LOC117398917
location: complement(1572451..1573068)
location: region:1572451-1573068:-1
so has part: feature:1572451-1573068:-1:exon

XP_033853910.2
type: Protein
SIO_000068: ncbiprotein

position:1572451:-1
position: 1572451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1573068:-1
position: 1573068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1572451-1573068:-1:exon

LOC117398948
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398948
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 431 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398948
subclass of: SO_0000673
so part of: LOC117398948
location: 1574626..1574944
location: region:1574626-1574944:1
so has part: feature:1574626-1574944:1:exon

position:1574626:1
position: 1574626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1574626-1574944:1:exon

LOC117967185
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117967185
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1575277..1575556
location: region:1575277-1575556:1
so has part: feature:1575277-1575556:1:exon

117967185
type: Gene
SIO_000068: ncbigene

position:1575277:1
position: 1575277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1575556:1
position: 1575556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1575277-1575556:1:exon

LOC117967185
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117967185
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC117967185
subclass of: SO_0000673
so part of: LOC117967185
location: 1575277..1575556
location: region:1575277-1575556:1
so has part: feature:1575277-1575556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1575277-1575556:1:exon

trnad-guc
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnad-guc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1585877..1585948)
location: region:1585877-1585948:-1
so has part: feature:1585877-1585948:-1:exon
subclass of: SO_0000663

117399171
type: Gene
SIO_000068: ncbigene

position:1585877:-1
position: 1585877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1585948:-1
position: 1585948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1585877-1585948:-1:exon

trnad-guc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnad-guc
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1585913..1585915),aa:Asp, seq:gtc)
SIO_010081: trnad-guc
subclass of: SO_0000673
so part of: trnad-guc
location: complement(1585877..1585948)
location: region:1585877-1585948:-1
so has part: feature:1585877-1585948:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1585877-1585948:-1:exon

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1586653..1586743
location: region:1586653-1586743:1
so has part: feature:1586653-1586743:1:exon
subclass of: SO_0000663

117399202
type: Gene
SIO_000068: ncbigene

position:1586653:1
position: 1586653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586743:1
position: 1586743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1586653-1586743:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1586686..1586688,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(1586653..1586689,1586708..1586743)
location: region:1586653-1586743:1
so has part: feature:1586653-1586689:1:exon
so has part: feature:1586708-1586743:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1586653-1586689:1:exon

position:1586689:1
position: 1586689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1586708-1586743:1:exon

position:1586708:1
position: 1586708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1588407..1588497
location: region:1588407-1588497:1
so has part: feature:1588407-1588497:1:exon
subclass of: SO_0000663

117967197
type: Gene
SIO_000068: ncbigene

position:1588407:1
position: 1588407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1588497:1
position: 1588497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1588407-1588497:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1588440..1588442,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(1588407..1588443,1588462..1588497)
location: region:1588407-1588497:1
so has part: feature:1588407-1588443:1:exon
so has part: feature:1588462-1588497:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1588407-1588443:1:exon

position:1588443:1
position: 1588443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1588462-1588497:1:exon

position:1588462:1
position: 1588462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398932
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398932
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1589141..1589534
location: region:1589141-1589534:1
so has part: feature:1589141-1589534:1:exon
subclass of: SO_0000010

117398932
type: Gene
SIO_000068: ncbigene

position:1589141:1
position: 1589141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1589534:1
position: 1589534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1589141-1589534:1:exon

LOC117398932
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398932
product: histone H2A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 144 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033998033.2
SIO_010081: LOC117398932
subclass of: SO_0000673
so part of: LOC117398932
location: 1589141..1589534
location: region:1589141-1589534:1
so has part: feature:1589141-1589534:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1589141-1589534:1:exon

LOC117398932
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398932
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A-like
translation: MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLMGGVTIAQGGVLPNIQAVLLPKKTEKPAKK
SIO_010081: LOC117398932
subclass of: SO_0000673
so part of: LOC117398932
location: 1589141..1589524
location: region:1589141-1589524:1
so has part: feature:1589141-1589524:1:exon

XP_033853924.1
type: Protein
SIO_000068: ncbiprotein

position:1589524:1
position: 1589524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1589141-1589524:1:exon

LOC117398951
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1590637..1591069
location: region:1590637-1591069:1
so has part: feature:1590637-1591069:1:exon
subclass of: SO_0000010

117398951
type: Gene
SIO_000068: ncbigene

position:1590637:1
position: 1590637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1591069:1
position: 1591069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1590637-1591069:1:exon

LOC117398951
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398951
product: histone H3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 619 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914487.1
SIO_010081: LOC117398951
subclass of: SO_0000673
so part of: LOC117398951
location: 1590637..1591069
location: region:1590637-1591069:1
so has part: feature:1590637-1591069:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1590637-1591069:1:exon

LOC117398951
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H3
translation: MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
SIO_010081: LOC117398951
subclass of: SO_0000673
so part of: LOC117398951
location: 1590659..1591069
location: region:1590659-1591069:1
so has part: feature:1590659-1591069:1:exon

XP_034770378.1
type: Protein
SIO_000068: ncbiprotein

position:1590659:1
position: 1590659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1590659-1591069:1:exon

LOC117398919
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1591430..1592199)
location: region:1591430-1592199:-1
so has part: feature:1591430-1592199:-1:exon
subclass of: SO_0000010

117398919
type: Gene
SIO_000068: ncbigene

position:1591430:-1
position: 1591430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1592199:-1
position: 1592199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1591430-1592199:-1:exon

LOC117398919
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398919
product: histone H1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914426.1
SIO_010081: LOC117398919
subclass of: SO_0000673
so part of: LOC117398919
location: complement(join(1591430..1592066,1592105..1592199))
location: region:1591430-1592199:-1
so has part: feature:1592105-1592199:-1:exon
so has part: feature:1591430-1592066:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1592105-1592199:-1:exon

position:1592105:-1
position: 1592105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1591430-1592066:-1:exon

position:1592066:-1
position: 1592066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398919
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H1-like
translation: MAEIAPAPAAPAPAKAPKKKTAAKPKKSGPSVSAAGCPWRALKKILQAGGYDVEKNNSLVNRALKSLVTKETLLQTKGTGASGSFKLNKKVAEAKEKAAKKKAAPKKPAAKKAVVKKTTKKVSAKKAATPKKTPTKAKKPKAVKKAPKSPKKAAAKPKKVVKKSPKKAKAAPKPKKVTKAAKPAAKKAAPKKK
SIO_010081: LOC117398919
subclass of: SO_0000673
so part of: LOC117398919
location: complement(join(1591580..1592066,1592105..1592199))
location: region:1591580-1592199:-1
so has part: feature:1592105-1592199:-1:exon
so has part: feature:1591580-1592066:-1:exon

XP_034770317.1
type: Protein
SIO_000068: ncbiprotein

position:1591580:-1
position: 1591580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1592105-1592199:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1591580-1592066:-1:exon

trnad-guc
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnad-guc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1594191..1594262)
location: region:1594191-1594262:-1
so has part: feature:1594191-1594262:-1:exon
subclass of: SO_0000663

117399168
type: Gene
SIO_000068: ncbigene

position:1594191:-1
position: 1594191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594262:-1
position: 1594262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1594191-1594262:-1:exon

trnad-guc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnad-guc
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1594227..1594229),aa:Asp, seq:gtc)
SIO_010081: trnad-guc
subclass of: SO_0000673
so part of: trnad-guc
location: complement(1594191..1594262)
location: region:1594191-1594262:-1
so has part: feature:1594191-1594262:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1594191-1594262:-1:exon

LOC117398935
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1600541..1604751
location: region:1600541-1604751:1
so has part: feature:1600541-1604751:1:exon
subclass of: SO_0000010

117398935
type: Gene
SIO_000068: ncbigene

position:1600541:1
position: 1600541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1604751:1
position: 1604751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1600541-1604751:1:exon

LOC117398935
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398935
product: histone H2A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 127 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033998036.2
SIO_010081: LOC117398935
subclass of: SO_0000673
so part of: LOC117398935
location: join(1600541..1600625,1604363..1604751)
location: region:1600541-1604751:1
so has part: feature:1600541-1600625:1:exon
so has part: feature:1604363-1604751:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1600541-1600625:1:exon

position:1600625:1
position: 1600625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1604363-1604751:1:exon

position:1604363:1
position: 1604363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A-like
translation: MRGDDSEQRDHTSTAGWRRALKVKMSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLMGGVTIAQGGVLPNIQAVLLPKKTEKPAKK
SIO_010081: LOC117398935
subclass of: SO_0000673
so part of: LOC117398935
location: join(1600559..1600625,1604363..1604751)
location: region:1600559-1604751:1
so has part: feature:1600559-1600625:1:exon
so has part: feature:1604363-1604751:1:exon

XP_033853927.2
type: Protein
SIO_000068: ncbiprotein

position:1600559:1
position: 1600559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1600559-1600625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1604363-1604751:1:exon

LOC117967181
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117967181
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1605850..1606279
location: region:1605850-1606279:1
so has part: feature:1605850-1606279:1:exon

117967181
type: Gene
SIO_000068: ncbigene

position:1605850:1
position: 1605850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1606279:1
position: 1606279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1605850-1606279:1:exon

LOC117967181
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117967181
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 177 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117967181
subclass of: SO_0000673
so part of: LOC117967181
location: 1605850..1606279
location: region:1605850-1606279:1
so has part: feature:1605850-1606279:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1605850-1606279:1:exon

LOC117398909
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1606727..1607397)
location: region:1606727-1607397:-1
so has part: feature:1606727-1607397:-1:exon

117398909
type: Gene
SIO_000068: ncbigene

position:1606727:-1
position: 1606727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607397:-1
position: 1607397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1606727-1607397:-1:exon

LOC117398909
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398909
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398909
subclass of: SO_0000673
so part of: LOC117398909
location: complement(1606727..1607397)
location: region:1606727-1607397:-1
so has part: feature:1606727-1607397:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1606727-1607397:-1:exon

LOC117967189
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117967189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1608881..1609195
location: region:1608881-1609195:1
so has part: feature:1608881-1609195:1:exon
subclass of: SO_0000010

117967189
type: Gene
SIO_000068: ncbigene

position:1608881:1
position: 1608881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1609195:1
position: 1609195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1608881-1609195:1:exon

LOC117967189
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117967189
product: histone H4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 332 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914493.1
SIO_010081: LOC117967189
subclass of: SO_0000673
so part of: LOC117967189
location: 1608881..1609195
location: region:1608881-1609195:1
so has part: feature:1608881-1609195:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1608881-1609195:1:exon

LOC117967189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117967189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H4
translation: MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
SIO_010081: LOC117967189
subclass of: SO_0000673
so part of: LOC117967189
location: 1608884..1609195
location: region:1608884-1609195:1
so has part: feature:1608884-1609195:1:exon

XP_034770384.1
type: Protein
SIO_000068: ncbiprotein

position:1608884:1
position: 1608884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1608884-1609195:1:exon

LOC117398954
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1609519..1617053
location: region:1609519-1617053:1
so has part: feature:1609519-1617053:1:exon
subclass of: SO_0000010

117398954
type: Gene
SIO_000068: ncbigene

position:1609519:1
position: 1609519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1617053:1
position: 1617053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1609519-1617053:1:exon

LOC117398954
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398954
product: uncharacterized LOC117398954
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914477.1
SIO_010081: LOC117398954
subclass of: SO_0000673
so part of: LOC117398954
location: join(1609519..1609828,1613700..1614035,1616731..1617053)
location: region:1609519-1617053:1
so has part: feature:1609519-1609828:1:exon
so has part: feature:1613700-1614035:1:exon
so has part: feature:1616731-1617053:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1609519-1609828:1:exon

position:1609828:1
position: 1609828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1613700-1614035:1:exon

position:1613700:1
position: 1613700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1614035:1
position: 1614035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1616731-1617053:1:exon

position:1616731:1
position: 1616731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398954
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398954
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: uncharacterized protein LOC117398954
translation: MSGRGKGGNGLGKGGVKRHRXKPAIRRMARRGGVKQISRLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVSAMDVVCALKLQGRTHFLTPCSLGCQRNSARSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIYNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
SIO_010081: LOC117398954
subclass of: SO_0000673
so part of: LOC117398954
location: join(1609519..1609828,1613700..1614035,1616731..1617053)
location: region:1609519-1617053:1
so has part: feature:1609519-1609828:1:exon
so has part: feature:1613700-1614035:1:exon
so has part: feature:1616731-1617053:1:exon

XP_034770368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1609519-1609828:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1613700-1614035:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1616731-1617053:1:exon

trnad-guc
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnad-guc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1609992..1610063)
location: region:1609992-1610063:-1
so has part: feature:1609992-1610063:-1:exon
subclass of: SO_0000663

117967201
type: Gene
SIO_000068: ncbigene

position:1609992:-1
position: 1609992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1610063:-1
position: 1610063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1609992-1610063:-1:exon

trnad-guc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnad-guc
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1610028..1610030),aa:Asp, seq:gtc)
SIO_010081: trnad-guc
subclass of: SO_0000673
so part of: trnad-guc
location: complement(1609992..1610063)
location: region:1609992-1610063:-1
so has part: feature:1609992-1610063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1609992-1610063:-1:exon

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1610779..1610869
location: region:1610779-1610869:1
so has part: feature:1610779-1610869:1:exon
subclass of: SO_0000663

117399197
type: Gene
SIO_000068: ncbigene

position:1610779:1
position: 1610779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1610869:1
position: 1610869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1610779-1610869:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1610812..1610814,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(1610779..1610815,1610834..1610869)
location: region:1610779-1610869:1
so has part: feature:1610779-1610815:1:exon
so has part: feature:1610834-1610869:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1610779-1610815:1:exon

position:1610815:1
position: 1610815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1610834-1610869:1:exon

position:1610834:1
position: 1610834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117967178
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117967178
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1614580..1615287)
location: region:1614580-1615287:-1
so has part: feature:1614580-1615287:-1:exon
subclass of: SO_0000010

117967178
type: Gene
SIO_000068: ncbigene

position:1614580:-1
position: 1614580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1615287:-1
position: 1615287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1614580-1615287:-1:exon

LOC117967178
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117967178
product: histone H1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914481.1
SIO_010081: LOC117967178
subclass of: SO_0000673
so part of: LOC117967178
location: complement(1614580..1615287)
location: region:1614580-1615287:-1
so has part: feature:1614580-1615287:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1614580-1615287:-1:exon

LOC117967178
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117967178
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H1-like
translation: MAETAPAPAAPAPAKAPKKKTAAKPKKSGPSVSELIVNAVSASKERSGLSVAALKKILQAGGYDVEKNNSLVNRALKSLVTKETLLQTKGTGASGSVKLNKQAAEAKEKAAKKKAAPKKPAAKKAVVKKTTKKVSAKKAATPKKTPTKAKKPKAVKKAPKSPKKAAAKPKKVVKKSPKKAKAAPKPKKVTKAAKPAAKKAAPKKK
SIO_010081: LOC117967178
subclass of: SO_0000673
so part of: LOC117967178
location: complement(1614632..1615249)
location: region:1614632-1615249:-1
so has part: feature:1614632-1615249:-1:exon

XP_034770372.1
type: Protein
SIO_000068: ncbiprotein

position:1614632:-1
position: 1614632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1615249:-1
position: 1615249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1614632-1615249:-1:exon

LOC117967154
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117967154
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1617386..1617728
location: region:1617386-1617728:1
so has part: feature:1617386-1617728:1:exon

117967154
type: Gene
SIO_000068: ncbigene

position:1617386:1
position: 1617386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1617728:1
position: 1617728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1617386-1617728:1:exon

LOC117967154
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117967154
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC117967154
subclass of: SO_0000673
so part of: LOC117967154
location: 1617386..1617728
location: region:1617386-1617728:1
so has part: feature:1617386-1617728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1617386-1617728:1:exon

trnad-guc
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnad-guc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1617857..1617928)
location: region:1617857-1617928:-1
so has part: feature:1617857-1617928:-1:exon
subclass of: SO_0000663

117399170
type: Gene
SIO_000068: ncbigene

position:1617857:-1
position: 1617857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1617928:-1
position: 1617928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1617857-1617928:-1:exon

trnad-guc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnad-guc
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1617893..1617895),aa:Asp, seq:gtc)
SIO_010081: trnad-guc
subclass of: SO_0000673
so part of: trnad-guc
location: complement(1617857..1617928)
location: region:1617857-1617928:-1
so has part: feature:1617857-1617928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1617857-1617928:-1:exon

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1618642..1618732
location: region:1618642-1618732:1
so has part: feature:1618642-1618732:1:exon
subclass of: SO_0000663

117399198
type: Gene
SIO_000068: ncbigene

position:1618642:1
position: 1618642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1618732:1
position: 1618732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1618642-1618732:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1618675..1618677,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(1618642..1618678,1618697..1618732)
location: region:1618642-1618732:1
so has part: feature:1618642-1618678:1:exon
so has part: feature:1618697-1618732:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1618642-1618678:1:exon

position:1618678:1
position: 1618678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1618697-1618732:1:exon

position:1618697:1
position: 1618697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117967182
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117967182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1621546..1621958
location: region:1621546-1621958:1
so has part: feature:1621546-1621958:1:exon
subclass of: SO_0000010

117967182
type: Gene
SIO_000068: ncbigene

position:1621546:1
position: 1621546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1621958:1
position: 1621958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1621546-1621958:1:exon

LOC117967182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117967182
product: histone H3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 604 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914488.1
SIO_010081: LOC117967182
subclass of: SO_0000673
so part of: LOC117967182
location: 1621546..1621958
location: region:1621546-1621958:1
so has part: feature:1621546-1621958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1621546-1621958:1:exon

LOC117967182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117967182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H3
translation: MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
SIO_010081: LOC117967182
subclass of: SO_0000673
so part of: LOC117967182
location: 1621548..1621958
location: region:1621548-1621958:1
so has part: feature:1621548-1621958:1:exon

XP_034770379.1
type: Protein
SIO_000068: ncbiprotein

position:1621548:1
position: 1621548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1621548-1621958:1:exon

LOC117967180
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117967180
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1622634..1623437)
location: region:1622634-1623437:-1
so has part: feature:1622634-1623437:-1:exon
subclass of: SO_0000010

117967180
type: Gene
SIO_000068: ncbigene

position:1622634:-1
position: 1622634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1623437:-1
position: 1623437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1622634-1623437:-1:exon

LOC117967180
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117967180
product: histone H1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914483.1
SIO_010081: LOC117967180
subclass of: SO_0000673
so part of: LOC117967180
location: complement(1622634..1623437)
location: region:1622634-1623437:-1
so has part: feature:1622634-1623437:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1622634-1623437:-1:exon

LOC117967180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117967180
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H1-like
translation: MAETAPAPAAPAPAKAPKKKTAAKPKKSGPSVSELIVKAVSASKERSGLSVAALKKILQAGGYDVEKNNSLVNRALKSLVTKETLLQTKGTGASGSVKLNKQAAEAKEKAAKKKAAPKKPAAKKAVVKKTTKKVSAKKAATPKKTPTKAKKPKAVKKAPKSPKKAAAKPKKVVKKSPKKAKAAPKPKKVTKAAKPAAKKAAPKKK
SIO_010081: LOC117967180
subclass of: SO_0000673
so part of: LOC117967180
location: complement(1622753..1623370)
location: region:1622753-1623370:-1
so has part: feature:1622753-1623370:-1:exon

XP_034770374.1
type: Protein
SIO_000068: ncbiprotein

position:1622753:-1
position: 1622753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1623370:-1
position: 1623370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1622753-1623370:-1:exon

LOC117398978
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1624868..1625182
location: region:1624868-1625182:1
so has part: feature:1624868-1625182:1:exon
subclass of: SO_0000010

117398978
type: Gene
SIO_000068: ncbigene

position:1624868:1
position: 1624868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1625182:1
position: 1625182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1624868-1625182:1:exon

LOC117398978
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398978
product: histone H4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 273 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034914494.1
SIO_010081: LOC117398978
subclass of: SO_0000673
so part of: LOC117398978
location: 1624868..1625182
location: region:1624868-1625182:1
so has part: feature:1624868-1625182:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1624868-1625182:1:exon

LOC117398978
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H4
translation: MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
SIO_010081: LOC117398978
subclass of: SO_0000673
so part of: LOC117398978
location: 1624871..1625182
location: region:1624871-1625182:1
so has part: feature:1624871-1625182:1:exon

XP_034770385.1
type: Protein
SIO_000068: ncbiprotein

position:1624871:1
position: 1624871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1624871-1625182:1:exon

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1625549..1625636
location: region:1625549-1625636:1
so has part: feature:1625549-1625636:1:exon
subclass of: SO_0000663

117399199
type: Gene
SIO_000068: ncbigene

position:1625549:1
position: 1625549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1625636:1
position: 1625636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1625549-1625636:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1625582..1625584,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(1625549..1625585,1625601..1625636)
location: region:1625549-1625636:1
so has part: feature:1625549-1625585:1:exon
so has part: feature:1625601-1625636:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1625549-1625585:1:exon

position:1625585:1
position: 1625585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1625601-1625636:1:exon

position:1625601:1
position: 1625601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnad-guc
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnad-guc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1626089..1626160)
location: region:1626089-1626160:-1
so has part: feature:1626089-1626160:-1:exon
subclass of: SO_0000663

117967203
type: Gene
SIO_000068: ncbigene

position:1626089:-1
position: 1626089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1626160:-1
position: 1626160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1626089-1626160:-1:exon

trnad-guc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnad-guc
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1626125..1626127),aa:Asp, seq:gtc)
SIO_010081: trnad-guc
subclass of: SO_0000673
so part of: trnad-guc
location: complement(1626089..1626160)
location: region:1626089-1626160:-1
so has part: feature:1626089-1626160:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1626089-1626160:-1:exon

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1626874..1626961
location: region:1626874-1626961:1
so has part: feature:1626874-1626961:1:exon
subclass of: SO_0000663

117967198
type: Gene
SIO_000068: ncbigene

position:1626874:1
position: 1626874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626961:1
position: 1626961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1626874-1626961:1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1626907..1626909,aa:Tyr,seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: join(1626874..1626910,1626926..1626961)
location: region:1626874-1626961:1
so has part: feature:1626874-1626910:1:exon
so has part: feature:1626926-1626961:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1626874-1626910:1:exon

position:1626910:1
position: 1626910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1626926-1626961:1:exon

position:1626926:1
position: 1626926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398897
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398897
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1630660..1634840)
location: region:1630660-1634840:-1
so has part: feature:1630660-1634840:-1:exon
subclass of: SO_0000010

117398897
type: Gene
SIO_000068: ncbigene

position:1630660:-1
position: 1630660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1634840:-1
position: 1634840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1630660-1634840:-1:exon

LOC117398897
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398897
product: zinc finger protein 525-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033997997.2
SIO_010081: LOC117398897
subclass of: SO_0000673
so part of: LOC117398897
location: complement(join(1630660..1632280,1634108..1634840))
location: region:1630660-1634840:-1
so has part: feature:1634108-1634840:-1:exon
so has part: feature:1630660-1632280:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1634108-1634840:-1:exon

position:1634108:-1
position: 1634108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1630660-1632280:-1:exon

position:1632280:-1
position: 1632280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398897
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398897
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 525-like
translation: MRGDDSEQRDHTSTAGWRRALKGPAERNSLPHAEEGSKAESVPIQEELFDQEWCRSPEQATELTSIEREEEKPALDPVHINEEIPGIEPVIIKEEVLELESDPIEEGGSDHFERQQQIHTGEQLHLCLVCGKSLSTSTELKRHHRIHTGERPYCCTECGKSFNTCTELKRHRRFHTGEKLHHLKTHQQIHYGRKLYRYNGCEKSFTQFGTLTLHQRMHTGGKLYHCTDCAKDFNTAAELKIHQRSHTGEKPYRCSECEKSFKQVSRLKSHQRIHTGEKPYSCDHCGKRFTREGNLVLHLRVHTGEQSTHCAQ
SIO_010081: LOC117398897
subclass of: SO_0000673
so part of: LOC117398897
location: complement(join(1631409..1632280,1634108..1634174))
location: region:1631409-1634174:-1
so has part: feature:1634108-1634174:-1:exon
so has part: feature:1631409-1632280:-1:exon

XP_033853888.1
type: Protein
SIO_000068: ncbiprotein

position:1631409:-1
position: 1631409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1634174:-1
position: 1634174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1634108-1634174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1631409-1632280:-1:exon

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1638081..1638168)
location: region:1638081-1638168:-1
so has part: feature:1638081-1638168:-1:exon
subclass of: SO_0000663

117399166
type: Gene
SIO_000068: ncbigene

position:1638081:-1
position: 1638081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1638168:-1
position: 1638168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1638081-1638168:-1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1638133..1638135),aa:Tyr, seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: complement(join(1638081..1638116,1638132..1638168))
location: region:1638081-1638168:-1
so has part: feature:1638132-1638168:-1:exon
so has part: feature:1638081-1638116:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1638132-1638168:-1:exon

position:1638132:-1
position: 1638132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1638081-1638116:-1:exon

position:1638116:-1
position: 1638116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398928
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1639002..1641730)
location: region:1639002-1641730:-1
so has part: feature:1639002-1641730:-1:exon
subclass of: SO_0000010

117398928
type: Gene
SIO_000068: ncbigene

position:1639002:-1
position: 1639002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1641730:-1
position: 1641730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1639002-1641730:-1:exon

LOC117398928
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398928
product: histone H3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 431 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033998030.2
SIO_010081: LOC117398928
subclass of: SO_0000673
so part of: LOC117398928
location: complement(join(1639002..1639419,1641720..1641730))
location: region:1639002-1641730:-1
so has part: feature:1641720-1641730:-1:exon
so has part: feature:1639002-1639419:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1641720-1641730:-1:exon

position:1641720:-1
position: 1641720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1639002-1639419:-1:exon

position:1639419:-1
position: 1639419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398928
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H3
translation: MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
SIO_010081: LOC117398928
subclass of: SO_0000673
so part of: LOC117398928
location: complement(1639002..1639412)
location: region:1639002-1639412:-1
so has part: feature:1639002-1639412:-1:exon

XP_033853921.1
type: Protein
SIO_000068: ncbiprotein

position:1639412:-1
position: 1639412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1639002-1639412:-1:exon

LOC117398943
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398943
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1640965..1641578)
location: region:1640965-1641578:-1
so has part: feature:1640965-1641578:-1:exon
subclass of: SO_0000010

117398943
type: Gene
SIO_000068: ncbigene

position:1640965:-1
position: 1640965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1641578:-1
position: 1641578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1640965-1641578:-1:exon

LOC117398943
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398943
product: histone H2A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 120 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033998043.2
SIO_010081: LOC117398943
subclass of: SO_0000673
so part of: LOC117398943
location: complement(1640965..1641578)
location: region:1640965-1641578:-1
so has part: feature:1640965-1641578:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1640965-1641578:-1:exon

LOC117398943
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398943
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A-like
translation: MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLMGGVTIAQGGVLPNIQAVLLPKKTEKPAKK
SIO_010081: LOC117398943
subclass of: SO_0000673
so part of: LOC117398943
location: complement(1641195..1641578)
location: region:1641195-1641578:-1
so has part: feature:1641195-1641578:-1:exon

XP_033853934.2
type: Protein
SIO_000068: ncbiprotein

position:1641195:-1
position: 1641195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1641195-1641578:-1:exon

LOC117398880
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1646473..1649385
location: region:1646473-1649385:1
so has part: feature:1646473-1649385:1:exon
subclass of: SO_0000010

117398880
type: Gene
SIO_000068: ncbigene

position:1646473:1
position: 1646473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1649385:1
position: 1649385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1646473-1649385:1:exon

LOC117398880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398880
product: zinc finger protein 32-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033997974.2
SIO_010081: LOC117398880
subclass of: SO_0000673
so part of: LOC117398880
location: join(1646473..1647094,1647651..1649385)
location: region:1646473-1649385:1
so has part: feature:1646473-1647094:1:exon
so has part: feature:1647651-1649385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1646473-1647094:1:exon

position:1647094:1
position: 1647094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1647651-1649385:1:exon

position:1647651:1
position: 1647651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 32-like
translation: MEEARVRRVCEMKEEMDICASSASLLEEELASAIEPAVKAAVLSVMSALAKFVDSKCAVFNLRLDERDQEFESVRLRLEIAESELKAVSEREYTNTGDKNFTQSFTNTNEQYCGVDMDVIHVPELQQEEHRLVHTRTAEWRHTVEGPAERNALPHAEEGSKAESVPIQEELFDQEWCRSPEQATELTSIEGEEETHALDPVHINEEIPGIEPVIIKEEVLELEFDPSEEGGSDHFEKLQQIHICTVCGESYTKLSDLTLHQRIHTGGKPYLCTECGVTYSDLNNLMKHLQIHSRDKLYQCSECGKSFITKDELKRHHRIHTGERPYCCTECRKRFNTSTDLKRHRRIHTGEKPYSCTRCGKSFTQLQHLKTHLRIHTGENPYCCGQCGKSFKQSQHLKTHQRTHSGKK
SIO_010081: LOC117398880
subclass of: SO_0000673
so part of: LOC117398880
location: join(1646659..1647094,1647651..1648441)
location: region:1646659-1648441:1
so has part: feature:1646659-1647094:1:exon
so has part: feature:1647651-1648441:1:exon

XP_033853865.2
type: Protein
SIO_000068: ncbiprotein

position:1646659:1
position: 1646659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648441:1
position: 1648441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1646659-1647094:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647651-1648441:1:exon

LOC117398876
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1654116..1686946
location: region:1654116-1686946:1
so has part: feature:1654116-1686946:1:exon
subclass of: SO_0000010

117398876
type: Gene
SIO_000068: ncbigene

position:1654116:1
position: 1654116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1686946:1
position: 1686946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1654116-1686946:1:exon

LOC117398876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398876
product: zinc finger protein 19-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034914474.1
SIO_010081: LOC117398876
subclass of: SO_0000673
so part of: LOC117398876
location: join(1654116..1654361,1683857..1684376,1684877..1686946)
location: region:1654116-1686946:1
so has part: feature:1654116-1654361:1:exon
so has part: feature:1683857-1684376:1:exon
so has part: feature:1684877-1686946:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1654116-1654361:1:exon

position:1654361:1
position: 1654361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1683857-1684376:1:exon

position:1683857:1
position: 1683857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684376:1
position: 1684376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1684877-1686946:1:exon

position:1684877:1
position: 1684877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 19-like isoform X1
translation: MEEARVRRVCEMKEEMDICASSASLLEEELASAIEPAVKAAVLSVMSALAKFVDSKCAVFNLRLDERDQEFESVRLRLEIAESELKAMRDGEYTNTGDKNFTQSLTNTDTQYHGSDSIIAHGLPARDFSNLPVQPVRDPVPAVHTALKNSRVLIQEDGSYSEQDLLMRGDDSEQRDHTSTAGWRRALKGPAERNALPHAEEGSKAESVPIQEELFDQEWCRSPEQATELTSIEGEEEKPKLDPVHINEEIPGIEPVIIKEEVLELESDRIEEGGSNHFERQQQIHTGEKLHLYTVCGKSLSTSTDLKRHRRFHTGEKLHHLKTHQQIHYGKKLYHCSGGEKSFTQLGTLTLHQRMHTGGKLYRCTYCAKDFNTAEELKIHHRSHTGGKPYRCTECEKGFKQVSHLKAHQRIHTGEKPYSCTECEKSFKQISHLKSHQRIHTGEKPYSCDYCGKRFNRAGNLVSHLRVHRGKQSAHCAQ
SIO_010081: LOC117398876
subclass of: SO_0000673
so part of: LOC117398876
location: join(1654317..1654361,1683857..1684376,1684877..1685748)
location: region:1654317-1685748:1
so has part: feature:1654317-1654361:1:exon
so has part: feature:1683857-1684376:1:exon
so has part: feature:1684877-1685748:1:exon

XP_034770365.1
type: Protein
SIO_000068: ncbiprotein

position:1654317:1
position: 1654317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1685748:1
position: 1685748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1654317-1654361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683857-1684376:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1684877-1685748:1:exon

trnal-cag
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnal-cag
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1660852..1660934
location: region:1660852-1660934:1
so has part: feature:1660852-1660934:1:exon
subclass of: SO_0000663

117399196
type: Gene
SIO_000068: ncbigene

position:1660852:1
position: 1660852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1660934:1
position: 1660934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1660852-1660934:1:exon

trnal-cag
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnal-cag
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon CAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1660886..1660888,aa:Leu,seq:cag)
SIO_010081: trnal-cag
subclass of: SO_0000673
so part of: trnal-cag
location: 1660852..1660934
location: region:1660852-1660934:1
so has part: feature:1660852-1660934:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1660852-1660934:1:exon

trnad-guc
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnad-guc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1661434..1661505
location: region:1661434-1661505:1
so has part: feature:1661434-1661505:1:exon
subclass of: SO_0000663

117399195
type: Gene
SIO_000068: ncbigene

position:1661434:1
position: 1661434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1661505:1
position: 1661505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1661434-1661505:1:exon

trnad-guc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnad-guc
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1661467..1661469,aa:Asp,seq:gtc)
SIO_010081: trnad-guc
subclass of: SO_0000673
so part of: trnad-guc
location: 1661434..1661505
location: region:1661434-1661505:1
so has part: feature:1661434-1661505:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1661434-1661505:1:exon

trnay-gua
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnay-gua
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1661846..1661933)
location: region:1661846-1661933:-1
so has part: feature:1661846-1661933:-1:exon
subclass of: SO_0000663

117399165
type: Gene
SIO_000068: ncbigene

position:1661846:-1
position: 1661846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1661933:-1
position: 1661933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1661846-1661933:-1:exon

trnay-gua
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnay-gua
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1661898..1661900),aa:Tyr, seq:gta)
SIO_010081: trnay-gua
subclass of: SO_0000673
so part of: trnay-gua
location: complement(join(1661846..1661881,1661897..1661933))
location: region:1661846-1661933:-1
so has part: feature:1661897-1661933:-1:exon
so has part: feature:1661846-1661881:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1661897-1661933:-1:exon

position:1661897:-1
position: 1661897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1661846-1661881:-1:exon

position:1661881:-1
position: 1661881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398864
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398864
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1672323..1676387)
location: region:1672323-1676387:-1
so has part: feature:1672323-1676387:-1:exon
subclass of: SO_0000010

117398864
type: Gene
SIO_000068: ncbigene

position:1672323:-1
position: 1672323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1676387:-1
position: 1676387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1672323-1676387:-1:exon

LOC117398864
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398864
product: zinc finger protein 23-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033997956.2
SIO_010081: LOC117398864
subclass of: SO_0000673
so part of: LOC117398864
location: complement(join(1672323..1674296,1674784..1674895,1675770..1676387))
location: region:1672323-1676387:-1
so has part: feature:1675770-1676387:-1:exon
so has part: feature:1674784-1674895:-1:exon
so has part: feature:1672323-1674296:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1675770-1676387:-1:exon

position:1675770:-1
position: 1675770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1674784-1674895:-1:exon

position:1674784:-1
position: 1674784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1674895:-1
position: 1674895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1672323-1674296:-1:exon

position:1674296:-1
position: 1674296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398864
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398864
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 23-like
translation: MIRVSETKEEMDICASSASLLEEELASAIEPAVKAAVLSVMSALAKFVDSKCTVFNLRLDERDQEFESVRLRLEIAESELKAMRDGEYTNTGDKNFTQSLTNTETQYHGSDSIIAQGLPARDFSTLPVQPVRDSVPAVHTALKNSQVLIQEDGSYSEQDLLMQGDDSEHRDHTSTVGWRRALKGPAERNALPHAEEGSKAESVPIQEELFDQEWCRSPEQATELTSIEAEEEKPALDPVHINEEIPGIEPVIIKEEVLEIESDPIEEGCSDHFERLQQIHMGQKLHLCNVCGKSLSTSTELKRHQCIHTGERPYCCTECGKRFNTSTELKRHRRFHTGEKLHHLKTQQQIHYGKKLYHSTGGEKSFTQLGNLTLHQRMHTGGKLYRCTDCAKDFNTAAELKIHQRSHTGEKQYRCTECEKCFKQVSRLKSHQRIHTGEKPYSCDYCGKRFTLSTDLKRHQRIHTGEKPYSCSDCEKSFNQLSHLKAHQRIHTGEKPYSCDHCGKRFTRAGNLVSHLRVHRGKQSTHCAQ
SIO_010081: LOC117398864
subclass of: SO_0000673
so part of: LOC117398864
location: complement(join(1673257..1674296,1674784..1674895,1675770..1676207))
location: region:1673257-1676207:-1
so has part: feature:1675770-1676207:-1:exon
so has part: feature:1674784-1674895:-1:exon
so has part: feature:1673257-1674296:-1:exon

XP_033853847.2
type: Protein
SIO_000068: ncbiprotein

position:1673257:-1
position: 1673257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1676207:-1
position: 1676207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1675770-1676207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1674784-1674895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1673257-1674296:-1:exon

trnas-aga
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnas-aga
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1678153..1678234
location: region:1678153-1678234:1
so has part: feature:1678153-1678234:1:exon
subclass of: SO_0000663

117399194
type: Gene
SIO_000068: ncbigene

position:1678153:1
position: 1678153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1678234:1
position: 1678234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678153-1678234:1:exon

trnas-aga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnas-aga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1678186..1678188,aa:Ser,seq:aga)
SIO_010081: trnas-aga
subclass of: SO_0000673
so part of: trnas-aga
location: 1678153..1678234
location: region:1678153-1678234:1
so has part: feature:1678153-1678234:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1678153-1678234:1:exon

trnad-guc
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnad-guc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1678543..1678614
location: region:1678543-1678614:1
so has part: feature:1678543-1678614:1:exon
subclass of: SO_0000663

117399193
type: Gene
SIO_000068: ncbigene

position:1678543:1
position: 1678543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1678614:1
position: 1678614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678543-1678614:1:exon

trnad-guc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnad-guc
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1678576..1678578,aa:Asp,seq:gtc)
SIO_010081: trnad-guc
subclass of: SO_0000673
so part of: trnad-guc
location: 1678543..1678614
location: region:1678543-1678614:1
so has part: feature:1678543-1678614:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1678543-1678614:1:exon

trnad-guc
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnad-guc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1680958..1681029)
location: region:1680958-1681029:-1
so has part: feature:1680958-1681029:-1:exon
subclass of: SO_0000663

117399163
type: Gene
SIO_000068: ncbigene

position:1680958:-1
position: 1680958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1681029:-1
position: 1681029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1680958-1681029:-1:exon

trnad-guc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnad-guc
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1680994..1680996),aa:Asp, seq:gtc)
SIO_010081: trnad-guc
subclass of: SO_0000673
so part of: trnad-guc
location: complement(1680958..1681029)
location: region:1680958-1681029:-1
so has part: feature:1680958-1681029:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1680958-1681029:-1:exon

trnal-cag
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnal-cag
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1681518..1681600)
location: region:1681518-1681600:-1
so has part: feature:1681518-1681600:-1:exon
subclass of: SO_0000663

117399162
type: Gene
SIO_000068: ncbigene

position:1681518:-1
position: 1681518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1681600:-1
position: 1681600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition