Acipenser ruthenus isolate Gen_M01 chromosome 45, ASM1064508v1, whole genome shotgun sequence.
type: Entry
definition: Acipenser ruthenus isolate Gen_M01 chromosome 45, ASM1064508v1, whole genome shotgun sequence.
sequence version: NC_048367.1
sequence date: 2020-06-05
sequence: sequence
division: CON
label: NC_048367.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA635364
dblink: SAMN12612932
keyword: WGS
keyword: RefSeq
source: Acipenser ruthenus (sterlet)
organism: Acipenser ruthenus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser.
reference: 1
references: 32231327
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021295.1.\nAssembly name: ASM1064508v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of Wuerzburg on\n2020/02/19. The original whole-genome shotgun project has the\naccession VTUV00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of Wuerzburg\nAssembly Method :: SmartDeNovo v. May-2017; 3D-DNA v. 180114\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 42.0x\nSequencing Technology :: Illumina NovaSeq; PacBio; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Acipenser ruthenus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 6379585
topology: linear
so has quality: SO_0000987
location: 1..6379585
location: region:1-6379585:1
RO_0002162: 7906

NC_048367
type: RefSeq
SIO_000068: refseq

PRJNA635364
type: BioProject
SIO_000068: bioproject

SAMN12612932
type: BioSample
SIO_000068: biosample

1
title: The sterlet sturgeon genome sequence and the mechanisms of segmental rediploidization
author: Du, K.
author: Stock, M.
author: Kneitz, S.
author: Klopp, C.
author: Woltering, J.M.
author: Adolfi, M.C.
author: Feron, R.
author: Prokopov, D.
author: Makunin, A.
author: Kichigin, I.
author: Schmidt, C.
author: Fischer, P.
author: Kuhl, H.
author: Wuertz, S.
author: Gessner, J.
author: Kloas, W.
author: Cabau, C.
author: Iampietro, C.
author: Parrinello, H.
author: Tomlinson, C.
author: Journot, L.
author: Postlethwait, J.H.
author: Braasch, I.
author: Trifonov, V.
author: Warren, W.C.
author: Meyer, A.
author: Guiguen, Y.
author: Schartl, M.
journal: Nat Ecol Evol (2020)
pubmed: 32231327

32231327
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6379585:1
position: 6379585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6379585:1:source
so part of: sequence
organism: Acipenser ruthenus
mol type: genomic DNA
isolate: Gen_M01
isolation source: water
chromosome: 45
tissue type: testis, blood
country: Germany: IGB
lat lon: 52.448940 N 13.648750 E
collection date: 2018

7906
type: Taxonomy
SIO_000068: taxonomy

LOC117966727
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(219115..>220407)
location: region:219115-220407:-1
so has part: feature:219115-220407:-1:exon
subclass of: SO_0000010

117966727
type: Gene
SIO_000068: ncbigene

position:219115:-1
position: 219115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220407:-1
position: 220407
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219115-220407:-1:exon

LOC117966727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966727
product: zinc finger protein 239-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913364.1
SIO_010081: LOC117966727
subclass of: SO_0000673
so part of: LOC117966727
location: complement(219115..>220407)
location: region:219115-220407:-1
so has part: feature:219115-220407:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219115-220407:-1:exon

LOC117966727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: TELEPVYVQEETELQLVHIKEDKTELEPFYIEEESIDLFKDSENISCGKSVSQLGNLKTDQRIHTGEKPHHCTDCGIRFRGLGDLKKHQRIHTGEKPYQCPECAKSFSRLENLKRHQRIHTGAKPHRCTECWKSFRWLGDLKKHQRIHTGEKPYHCSECGKSFIESGTLKIHQRIHTGEKPHQCTECGKSFRGLGDLKTHQRIHTGEKPYHCTECGESFSVSGSLKTHQRIHTGDKPHHCTQCNKRFSRLGNLKIHQRIHTGEKPHHCTPCNKRFSRLANLTIHQRIHTGEKPYHCVDCGKSFIQLQNLNVHQRTHTGEKPYHCTQCGKTFAFSSQVKKHKCQF
SIO_010081: LOC117966727
subclass of: SO_0000673
so part of: LOC117966727
location: complement(219373..>220407)
location: region:219373-220407:-1
so has part: feature:219373-220407:-1:exon

XP_034769255.1
type: Protein
SIO_000068: ncbiprotein

position:219373:-1
position: 219373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219373-220407:-1:exon

LOC117410216
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410216
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(220484..237645)
location: region:220484-237645:-1
so has part: feature:220484-237645:-1:exon
subclass of: SO_0000011

117410216
type: Gene
SIO_000068: ncbigene

position:220484:-1
position: 220484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237645:-1
position: 237645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220484-237645:-1:exon

LOC117410216
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117410216
product: uncharacterized LOC117410216
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004545640.2
SIO_010081: LOC117410216
subclass of: SO_0000673
so part of: LOC117410216
location: complement(join(220484..220632,231433..231716,237427..237645))
location: region:220484-237645:-1
so has part: feature:237427-237645:-1:exon
so has part: feature:231433-231716:-1:exon
so has part: feature:220484-220632:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237427-237645:-1:exon

position:237427:-1
position: 237427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:231433-231716:-1:exon

position:231433:-1
position: 231433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231716:-1
position: 231716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:220484-220632:-1:exon

position:220632:-1
position: 220632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117410107
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(251831..292225)
location: region:251831-292225:-1
so has part: feature:251831-292225:-1:exon
subclass of: SO_0000010

117410107
type: Gene
SIO_000068: ncbigene

position:251831:-1
position: 251831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292225:-1
position: 292225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251831-292225:-1:exon

LOC117410107
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410107
product: splicing factor U2AF 65 kDa subunit, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034016516.2
SIO_010081: LOC117410107
subclass of: SO_0000673
so part of: LOC117410107
location: complement(join(251831..253101,254193..254444,273340..273447,275690..275812,281251..281330,281686..281824,282107..282223,282623..282774,283002..283105,290117..290270,291940..292225))
location: region:251831-292225:-1
so has part: feature:291940-292225:-1:exon
so has part: feature:290117-290270:-1:exon
so has part: feature:283002-283105:-1:exon
so has part: feature:282623-282774:-1:exon
so has part: feature:282107-282223:-1:exon
so has part: feature:281686-281824:-1:exon
so has part: feature:281251-281330:-1:exon
so has part: feature:275690-275812:-1:exon
so has part: feature:273340-273447:-1:exon
so has part: feature:254193-254444:-1:exon
so has part: feature:251831-253101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291940-292225:-1:exon

position:291940:-1
position: 291940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:290117-290270:-1:exon

position:290117:-1
position: 290117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290270:-1
position: 290270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:283002-283105:-1:exon

position:283002:-1
position: 283002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283105:-1
position: 283105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:282623-282774:-1:exon

position:282623:-1
position: 282623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282774:-1
position: 282774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:282107-282223:-1:exon

position:282107:-1
position: 282107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282223:-1
position: 282223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:281686-281824:-1:exon

position:281686:-1
position: 281686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281824:-1
position: 281824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:281251-281330:-1:exon

position:281251:-1
position: 281251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281330:-1
position: 281330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:275690-275812:-1:exon

position:275690:-1
position: 275690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275812:-1
position: 275812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:273340-273447:-1:exon

position:273340:-1
position: 273340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273447:-1
position: 273447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:254193-254444:-1:exon

position:254193:-1
position: 254193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254444:-1
position: 254444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:251831-253101:-1:exon

position:253101:-1
position: 253101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117410107
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410107
product: splicing factor U2AF 65 kDa subunit, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034016515.2
SIO_010081: LOC117410107
subclass of: SO_0000673
so part of: LOC117410107
location: complement(join(251831..253101,254193..254444,273340..273447,275690..275812,281251..281330,281686..281824,282107..282223,282623..282774,283002..283108,290117..290270,291940..292225))
location: region:251831-292225:-1
so has part: feature:291940-292225:-1:exon
so has part: feature:290117-290270:-1:exon
so has part: feature:283002-283108:-1:exon
so has part: feature:282623-282774:-1:exon
so has part: feature:282107-282223:-1:exon
so has part: feature:281686-281824:-1:exon
so has part: feature:281251-281330:-1:exon
so has part: feature:275690-275812:-1:exon
so has part: feature:273340-273447:-1:exon
so has part: feature:254193-254444:-1:exon
so has part: feature:251831-253101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291940-292225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290117-290270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283002-283108:-1:exon

position:283108:-1
position: 283108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:282623-282774:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282107-282223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:281686-281824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281251-281330:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275690-275812:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273340-273447:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:254193-254444:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:251831-253101:-1:exon

LOC117410107
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410107
product: splicing factor U2AF 65 kDa subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034016513.2
SIO_010081: LOC117410107
subclass of: SO_0000673
so part of: LOC117410107
location: complement(join(251831..253101,254193..254444,273340..273447,275690..275812,281251..281330,281686..281824,282107..282223,282623..282774,283002..283105,283336..283383,290117..290270,291940..292225))
location: region:251831-292225:-1
so has part: feature:291940-292225:-1:exon
so has part: feature:290117-290270:-1:exon
so has part: feature:283336-283383:-1:exon
so has part: feature:283002-283105:-1:exon
so has part: feature:282623-282774:-1:exon
so has part: feature:282107-282223:-1:exon
so has part: feature:281686-281824:-1:exon
so has part: feature:281251-281330:-1:exon
so has part: feature:275690-275812:-1:exon
so has part: feature:273340-273447:-1:exon
so has part: feature:254193-254444:-1:exon
so has part: feature:251831-253101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291940-292225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290117-290270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283336-283383:-1:exon

position:283336:-1
position: 283336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283383:-1
position: 283383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:283002-283105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282623-282774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:282107-282223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281686-281824:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281251-281330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275690-275812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273340-273447:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:254193-254444:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:251831-253101:-1:exon

LOC117410107
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410107
product: splicing factor U2AF 65 kDa subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034016512.2
SIO_010081: LOC117410107
subclass of: SO_0000673
so part of: LOC117410107
location: complement(join(251831..253101,254193..254444,273340..273447,275690..275812,281251..281330,281686..281824,282107..282223,282623..282774,283002..283108,283336..283383,290117..290270,291940..292225))
location: region:251831-292225:-1
so has part: feature:291940-292225:-1:exon
so has part: feature:290117-290270:-1:exon
so has part: feature:283336-283383:-1:exon
so has part: feature:283002-283108:-1:exon
so has part: feature:282623-282774:-1:exon
so has part: feature:282107-282223:-1:exon
so has part: feature:281686-281824:-1:exon
so has part: feature:281251-281330:-1:exon
so has part: feature:275690-275812:-1:exon
so has part: feature:273340-273447:-1:exon
so has part: feature:254193-254444:-1:exon
so has part: feature:251831-253101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291940-292225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290117-290270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283336-283383:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283002-283108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282623-282774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:282107-282223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281686-281824:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281251-281330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275690-275812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273340-273447:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:254193-254444:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:251831-253101:-1:exon

LOC117410107
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410107
product: splicing factor U2AF 65 kDa subunit, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034016518.2
SIO_010081: LOC117410107
subclass of: SO_0000673
so part of: LOC117410107
location: complement(join(252967..253101,254193..254444,273340..273426,275690..275812,281251..281330,281686..281824,282107..282223,282623..282774,283002..283105,290117..290270,291940..292225))
location: region:252967-292225:-1
so has part: feature:291940-292225:-1:exon
so has part: feature:290117-290270:-1:exon
so has part: feature:283002-283105:-1:exon
so has part: feature:282623-282774:-1:exon
so has part: feature:282107-282223:-1:exon
so has part: feature:281686-281824:-1:exon
so has part: feature:281251-281330:-1:exon
so has part: feature:275690-275812:-1:exon
so has part: feature:273340-273426:-1:exon
so has part: feature:254193-254444:-1:exon
so has part: feature:252967-253101:-1:exon

position:252967:-1
position: 252967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291940-292225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290117-290270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283002-283105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:282623-282774:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282107-282223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:281686-281824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281251-281330:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275690-275812:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273340-273426:-1:exon

position:273426:-1
position: 273426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:254193-254444:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:252967-253101:-1:exon

LOC117410107
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410107
product: splicing factor U2AF 65 kDa subunit, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034016517.2
SIO_010081: LOC117410107
subclass of: SO_0000673
so part of: LOC117410107
location: complement(join(252967..253101,254193..254444,273340..273426,275690..275812,281251..281330,281686..281824,282107..282223,282623..282774,283002..283108,290117..290270,291940..292225))
location: region:252967-292225:-1
so has part: feature:291940-292225:-1:exon
so has part: feature:290117-290270:-1:exon
so has part: feature:283002-283108:-1:exon
so has part: feature:282623-282774:-1:exon
so has part: feature:282107-282223:-1:exon
so has part: feature:281686-281824:-1:exon
so has part: feature:281251-281330:-1:exon
so has part: feature:275690-275812:-1:exon
so has part: feature:273340-273426:-1:exon
so has part: feature:254193-254444:-1:exon
so has part: feature:252967-253101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291940-292225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290117-290270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283002-283108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:282623-282774:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282107-282223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:281686-281824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281251-281330:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275690-275812:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273340-273426:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:254193-254444:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:252967-253101:-1:exon

LOC117410107
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410107
product: splicing factor U2AF 65 kDa subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034016514.2
SIO_010081: LOC117410107
subclass of: SO_0000673
so part of: LOC117410107
location: complement(join(252967..253101,254193..254444,273340..273426,275690..275812,281251..281330,281686..281824,282107..282223,282623..282774,283002..283108,283336..283383,290117..290270,291940..292225))
location: region:252967-292225:-1
so has part: feature:291940-292225:-1:exon
so has part: feature:290117-290270:-1:exon
so has part: feature:283336-283383:-1:exon
so has part: feature:283002-283108:-1:exon
so has part: feature:282623-282774:-1:exon
so has part: feature:282107-282223:-1:exon
so has part: feature:281686-281824:-1:exon
so has part: feature:281251-281330:-1:exon
so has part: feature:275690-275812:-1:exon
so has part: feature:273340-273426:-1:exon
so has part: feature:254193-254444:-1:exon
so has part: feature:252967-253101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291940-292225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290117-290270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283336-283383:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283002-283108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282623-282774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:282107-282223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281686-281824:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281251-281330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275690-275812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273340-273426:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:254193-254444:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:252967-253101:-1:exon

LOC117410107
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor U2AF 65 kDa subunit isoform X7
translation: MSEFDEFERQLNENKQERDKENRHRRPSPLRSRSDEKKTPTPTPTVTKSRERRSRERRSGSKDRRRRSRSPPREKKKKVRKYWDVPPPGFEHITPLQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNVMDQAIAGLNGMQLGDKKLLVQRASVGAKNATLTSINQTPVTLQVPGLMNTQVVQMGGLPTDVLCLMNMVAPEELLDDDEYEEIVEDVRDECSKYGAVKSIEIPRPVDGLEVPGCGKIFVEFVSVFDCQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
SIO_010081: LOC117410107
subclass of: SO_0000673
so part of: LOC117410107
location: complement(join(252967..253101,254193..254444,273340..273426,275690..275812,281251..281330,281686..281824,282107..282223,282623..282774,283002..283105,290117..290270,291940..291988))
location: region:252967-291988:-1
so has part: feature:291940-291988:-1:exon
so has part: feature:290117-290270:-1:exon
so has part: feature:283002-283105:-1:exon
so has part: feature:282623-282774:-1:exon
so has part: feature:282107-282223:-1:exon
so has part: feature:281686-281824:-1:exon
so has part: feature:281251-281330:-1:exon
so has part: feature:275690-275812:-1:exon
so has part: feature:273340-273426:-1:exon
so has part: feature:254193-254444:-1:exon
so has part: feature:252967-253101:-1:exon

XP_033872409.1
type: Protein
SIO_000068: ncbiprotein

position:291988:-1
position: 291988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291940-291988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290117-290270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283002-283105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:282623-282774:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282107-282223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:281686-281824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281251-281330:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275690-275812:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273340-273426:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:254193-254444:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:252967-253101:-1:exon

LOC117410107
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor U2AF 65 kDa subunit isoform X5
translation: MSEFDEFERQLNENKQERDKENRHRRPSPLRSRSDEKKTPTPTPTVTKSRERRSRERRSGSKDRRRRSRSPPREKKKKVRKYWDVPPPGFEHITPLQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNVMDQAHCSLSQAIAGLNGMQLGDKKLLVQRASVGAKNATLTSINQTPVTLQVPGLMNTQVVQMGGLPTDVLCLMNMVAPEELLDDDEYEEIVEDVRDECSKYGAVKSIEIPRPVDGLEVPGCGKIFVEFVSVFDCQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
SIO_010081: LOC117410107
subclass of: SO_0000673
so part of: LOC117410107
location: complement(join(252967..253101,254193..254444,273340..273447,275690..275812,281251..281330,281686..281824,282107..282223,282623..282774,283002..283105,290117..290270,291940..291988))
location: region:252967-291988:-1
so has part: feature:291940-291988:-1:exon
so has part: feature:290117-290270:-1:exon
so has part: feature:283002-283105:-1:exon
so has part: feature:282623-282774:-1:exon
so has part: feature:282107-282223:-1:exon
so has part: feature:281686-281824:-1:exon
so has part: feature:281251-281330:-1:exon
so has part: feature:275690-275812:-1:exon
so has part: feature:273340-273447:-1:exon
so has part: feature:254193-254444:-1:exon
so has part: feature:252967-253101:-1:exon

XP_033872407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291940-291988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290117-290270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283002-283105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:282623-282774:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282107-282223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:281686-281824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281251-281330:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275690-275812:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273340-273447:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:254193-254444:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:252967-253101:-1:exon

LOC117410107
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor U2AF 65 kDa subunit isoform X6
translation: MSEFDEFERQLNENKQERDKENRHRRPSPLRSRSDEKKTPTPTPTVTKSRERRSRERRSGSKDRRRRSSRSPPREKKKKVRKYWDVPPPGFEHITPLQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNVMDQAIAGLNGMQLGDKKLLVQRASVGAKNATLTSINQTPVTLQVPGLMNTQVVQMGGLPTDVLCLMNMVAPEELLDDDEYEEIVEDVRDECSKYGAVKSIEIPRPVDGLEVPGCGKIFVEFVSVFDCQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
SIO_010081: LOC117410107
subclass of: SO_0000673
so part of: LOC117410107
location: complement(join(252967..253101,254193..254444,273340..273426,275690..275812,281251..281330,281686..281824,282107..282223,282623..282774,283002..283108,290117..290270,291940..291988))
location: region:252967-291988:-1
so has part: feature:291940-291988:-1:exon
so has part: feature:290117-290270:-1:exon
so has part: feature:283002-283108:-1:exon
so has part: feature:282623-282774:-1:exon
so has part: feature:282107-282223:-1:exon
so has part: feature:281686-281824:-1:exon
so has part: feature:281251-281330:-1:exon
so has part: feature:275690-275812:-1:exon
so has part: feature:273340-273426:-1:exon
so has part: feature:254193-254444:-1:exon
so has part: feature:252967-253101:-1:exon

XP_033872408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291940-291988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290117-290270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283002-283108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:282623-282774:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282107-282223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:281686-281824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281251-281330:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275690-275812:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273340-273426:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:254193-254444:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:252967-253101:-1:exon

LOC117410107
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor U2AF 65 kDa subunit isoform X4
translation: MSEFDEFERQLNENKQERDKENRHRRPSPLRSRSDEKKTPTPTPTVTKSRERRSRERRSGSKDRRRRSSRSPPREKKKKVRKYWDVPPPGFEHITPLQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNVMDQAHCSLSQAIAGLNGMQLGDKKLLVQRASVGAKNATLTSINQTPVTLQVPGLMNTQVVQMGGLPTDVLCLMNMVAPEELLDDDEYEEIVEDVRDECSKYGAVKSIEIPRPVDGLEVPGCGKIFVEFVSVFDCQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
SIO_010081: LOC117410107
subclass of: SO_0000673
so part of: LOC117410107
location: complement(join(252967..253101,254193..254444,273340..273447,275690..275812,281251..281330,281686..281824,282107..282223,282623..282774,283002..283108,290117..290270,291940..291988))
location: region:252967-291988:-1
so has part: feature:291940-291988:-1:exon
so has part: feature:290117-290270:-1:exon
so has part: feature:283002-283108:-1:exon
so has part: feature:282623-282774:-1:exon
so has part: feature:282107-282223:-1:exon
so has part: feature:281686-281824:-1:exon
so has part: feature:281251-281330:-1:exon
so has part: feature:275690-275812:-1:exon
so has part: feature:273340-273447:-1:exon
so has part: feature:254193-254444:-1:exon
so has part: feature:252967-253101:-1:exon

XP_033872406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291940-291988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290117-290270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283002-283108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:282623-282774:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282107-282223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:281686-281824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281251-281330:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275690-275812:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273340-273447:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:254193-254444:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:252967-253101:-1:exon

LOC117410107
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor U2AF 65 kDa subunit isoform X2
translation: MSEFDEFERQLNENKQERDKENRHRRPSPLRSRSDEKKTPTPTPTVTKSRERRSRERRSGSKDRRRRSQQLHKLTTEQNEEINNRSPPREKKKKVRKYWDVPPPGFEHITPLQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNVMDQAHCSLSQAIAGLNGMQLGDKKLLVQRASVGAKNATLTSINQTPVTLQVPGLMNTQVVQMGGLPTDVLCLMNMVAPEELLDDDEYEEIVEDVRDECSKYGAVKSIEIPRPVDGLEVPGCGKIFVEFVSVFDCQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
SIO_010081: LOC117410107
subclass of: SO_0000673
so part of: LOC117410107
location: complement(join(252967..253101,254193..254444,273340..273447,275690..275812,281251..281330,281686..281824,282107..282223,282623..282774,283002..283105,283336..283383,290117..290270,291940..291988))
location: region:252967-291988:-1
so has part: feature:291940-291988:-1:exon
so has part: feature:290117-290270:-1:exon
so has part: feature:283336-283383:-1:exon
so has part: feature:283002-283105:-1:exon
so has part: feature:282623-282774:-1:exon
so has part: feature:282107-282223:-1:exon
so has part: feature:281686-281824:-1:exon
so has part: feature:281251-281330:-1:exon
so has part: feature:275690-275812:-1:exon
so has part: feature:273340-273447:-1:exon
so has part: feature:254193-254444:-1:exon
so has part: feature:252967-253101:-1:exon

XP_033872404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291940-291988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290117-290270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283336-283383:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283002-283105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282623-282774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:282107-282223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281686-281824:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281251-281330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275690-275812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273340-273447:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:254193-254444:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:252967-253101:-1:exon

LOC117410107
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor U2AF 65 kDa subunit isoform X3
translation: MSEFDEFERQLNENKQERDKENRHRRPSPLRSRSDEKKTPTPTPTVTKSRERRSRERRSGSKDRRRRSQQLHKLTTEQNEEINNSRSPPREKKKKVRKYWDVPPPGFEHITPLQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNVMDQAIAGLNGMQLGDKKLLVQRASVGAKNATLTSINQTPVTLQVPGLMNTQVVQMGGLPTDVLCLMNMVAPEELLDDDEYEEIVEDVRDECSKYGAVKSIEIPRPVDGLEVPGCGKIFVEFVSVFDCQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
SIO_010081: LOC117410107
subclass of: SO_0000673
so part of: LOC117410107
location: complement(join(252967..253101,254193..254444,273340..273426,275690..275812,281251..281330,281686..281824,282107..282223,282623..282774,283002..283108,283336..283383,290117..290270,291940..291988))
location: region:252967-291988:-1
so has part: feature:291940-291988:-1:exon
so has part: feature:290117-290270:-1:exon
so has part: feature:283336-283383:-1:exon
so has part: feature:283002-283108:-1:exon
so has part: feature:282623-282774:-1:exon
so has part: feature:282107-282223:-1:exon
so has part: feature:281686-281824:-1:exon
so has part: feature:281251-281330:-1:exon
so has part: feature:275690-275812:-1:exon
so has part: feature:273340-273426:-1:exon
so has part: feature:254193-254444:-1:exon
so has part: feature:252967-253101:-1:exon

XP_033872405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291940-291988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290117-290270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283336-283383:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283002-283108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282623-282774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:282107-282223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281686-281824:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281251-281330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275690-275812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273340-273426:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:254193-254444:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:252967-253101:-1:exon

LOC117410107
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor U2AF 65 kDa subunit isoform X1
translation: MSEFDEFERQLNENKQERDKENRHRRPSPLRSRSDEKKTPTPTPTVTKSRERRSRERRSGSKDRRRRSQQLHKLTTEQNEEINNSRSPPREKKKKVRKYWDVPPPGFEHITPLQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNVMDQAHCSLSQAIAGLNGMQLGDKKLLVQRASVGAKNATLTSINQTPVTLQVPGLMNTQVVQMGGLPTDVLCLMNMVAPEELLDDDEYEEIVEDVRDECSKYGAVKSIEIPRPVDGLEVPGCGKIFVEFVSVFDCQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
SIO_010081: LOC117410107
subclass of: SO_0000673
so part of: LOC117410107
location: complement(join(252967..253101,254193..254444,273340..273447,275690..275812,281251..281330,281686..281824,282107..282223,282623..282774,283002..283108,283336..283383,290117..290270,291940..291988))
location: region:252967-291988:-1
so has part: feature:291940-291988:-1:exon
so has part: feature:290117-290270:-1:exon
so has part: feature:283336-283383:-1:exon
so has part: feature:283002-283108:-1:exon
so has part: feature:282623-282774:-1:exon
so has part: feature:282107-282223:-1:exon
so has part: feature:281686-281824:-1:exon
so has part: feature:281251-281330:-1:exon
so has part: feature:275690-275812:-1:exon
so has part: feature:273340-273447:-1:exon
so has part: feature:254193-254444:-1:exon
so has part: feature:252967-253101:-1:exon

XP_033872403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291940-291988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290117-290270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283336-283383:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283002-283108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282623-282774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:282107-282223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281686-281824:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281251-281330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275690-275812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273340-273447:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:254193-254444:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:252967-253101:-1:exon

LOC117966770
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 328773..337556
location: region:328773-337556:1
so has part: feature:328773-337556:1:exon
subclass of: SO_0000010

117966770
type: Gene
SIO_000068: ncbigene

position:328773:1
position: 328773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337556:1
position: 337556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328773-337556:1:exon

LOC117966770
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966770
product: uncharacterized LOC117966770
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034913432.1
SIO_010081: LOC117966770
subclass of: SO_0000673
so part of: LOC117966770
location: join(328773..328855,329334..329434,329823..329894,332261..332398,336369..337556)
location: region:328773-337556:1
so has part: feature:328773-328855:1:exon
so has part: feature:329334-329434:1:exon
so has part: feature:329823-329894:1:exon
so has part: feature:332261-332398:1:exon
so has part: feature:336369-337556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:328773-328855:1:exon

position:328855:1
position: 328855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:329334-329434:1:exon

position:329334:1
position: 329334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329434:1
position: 329434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:329823-329894:1:exon

position:329823:1
position: 329823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329894:1
position: 329894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:332261-332398:1:exon

position:332261:1
position: 332261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332398:1
position: 332398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:336369-337556:1:exon

position:336369:1
position: 336369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117966770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117966770
translation: MTLRALLFLAILLSGVGGRDPPIVSNLLKVLEHEVTGFRAVFPKNYNTTHYYNETLLCSGEEEECCLLRAASVLSQDWYSLLSNLWPENMKTNIIKELQWQLSRLTEERVSPPVDVSRLPPLSSSPEQLLSLTSSLLKHWLRIHSTLTHSCEGREGEGTEWEGEAEAGPERGTEEEGARESERKRHKGFPETESPAGQAAVLQRTQMAVICLATAVHWMGL
SIO_010081: LOC117966770
subclass of: SO_0000673
so part of: LOC117966770
location: join(328843..328855,329334..329434,329823..329894,332261..332398,336369..336710)
location: region:328843-336710:1
so has part: feature:328843-328855:1:exon
so has part: feature:329334-329434:1:exon
so has part: feature:329823-329894:1:exon
so has part: feature:332261-332398:1:exon
so has part: feature:336369-336710:1:exon

XP_034769323.1
type: Protein
SIO_000068: ncbiprotein

position:328843:1
position: 328843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336710:1
position: 336710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328843-328855:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329334-329434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329823-329894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332261-332398:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336369-336710:1:exon

LOC117410204
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(369647..420625)
location: region:369647-420625:-1
so has part: feature:369647-420625:-1:exon
subclass of: SO_0000010

117410204
type: Gene
SIO_000068: ncbigene

position:369647:-1
position: 369647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420625:-1
position: 420625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369647-420625:-1:exon

LOC117410204
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410204
product: ras-interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913365.1
SIO_010081: LOC117410204
subclass of: SO_0000673
so part of: LOC117410204
location: complement(join(369647..370294,372212..372353,372478..372653,377169..377430,378633..378739,378930..379078,380034..380071,380418..380660,417467..417613,419167..419462,420112..420625))
location: region:369647-420625:-1
so has part: feature:420112-420625:-1:exon
so has part: feature:419167-419462:-1:exon
so has part: feature:417467-417613:-1:exon
so has part: feature:380418-380660:-1:exon
so has part: feature:380034-380071:-1:exon
so has part: feature:378930-379078:-1:exon
so has part: feature:378633-378739:-1:exon
so has part: feature:377169-377430:-1:exon
so has part: feature:372478-372653:-1:exon
so has part: feature:372212-372353:-1:exon
so has part: feature:369647-370294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:420112-420625:-1:exon

position:420112:-1
position: 420112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:419167-419462:-1:exon

position:419167:-1
position: 419167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419462:-1
position: 419462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:417467-417613:-1:exon

position:417467:-1
position: 417467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417613:-1
position: 417613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:380418-380660:-1:exon

position:380418:-1
position: 380418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380660:-1
position: 380660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:380034-380071:-1:exon

position:380034:-1
position: 380034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380071:-1
position: 380071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:378930-379078:-1:exon

position:378930:-1
position: 378930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379078:-1
position: 379078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:378633-378739:-1:exon

position:378633:-1
position: 378633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378739:-1
position: 378739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:377169-377430:-1:exon

position:377169:-1
position: 377169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377430:-1
position: 377430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:372478-372653:-1:exon

position:372478:-1
position: 372478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372653:-1
position: 372653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:372212-372353:-1:exon

position:372212:-1
position: 372212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372353:-1
position: 372353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:369647-370294:-1:exon

position:370294:-1
position: 370294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117410204
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-interacting protein 1
translation: MNALVALCHFCELHGPRTLFCTEALHSPTPLETGGGASAQGTEPGRGSSALSCSQGEEGEEPGDGGITMRARDSALGQQATPTTTGSPAPQRADMCEGCRSLPCGHPGFISHDSETSIKYLSHQHPPHPQLFSIVRQACVRSLSCEHCVDYVCGFHSVDFILLNLSVDFVLCQEIVEKNGSPDSGAGALAPAFLLSLCIDHASKHLHPAHLPALLLKTANLVKGLVWDKIKEIGDKQPENQEKSDVSALSIEALTSELRPLMFWMSNATELLNYIQVKVEDMERDLEFESSSDLSADLETSSEALALLDDVIMYTFQQCVYYLTKTLYSALPALLDSNPFSLPPPSALPPDPSPLTPDLSLMPGGVARVLEVYLSTLELTRTCQLHPDLVSQTFGYLLFFSNASLFNTLMERGSGSDSFFTWSRAVQIRTNLDLVLDWLQGAGLGDIANEFFRKLSITVNFLCIPKTRLIHSSWSSLQEEYPLLSPAQLNHLLRHYRLGAGREPPTSWQPPEDSNLSSDIFESFLDHPPLILPNEVSRLGLGEPITSQELQQEVQRIRAFLLDLEQEALPANQRIQL
SIO_010081: LOC117410204
subclass of: SO_0000673
so part of: LOC117410204
location: complement(join(370116..370294,372212..372353,372478..372653,377169..377430,378633..378739,378930..379078,380034..380071,380418..380660,417467..417613,419167..419457))
location: region:370116-419457:-1
so has part: feature:419167-419457:-1:exon
so has part: feature:417467-417613:-1:exon
so has part: feature:380418-380660:-1:exon
so has part: feature:380034-380071:-1:exon
so has part: feature:378930-379078:-1:exon
so has part: feature:378633-378739:-1:exon
so has part: feature:377169-377430:-1:exon
so has part: feature:372478-372653:-1:exon
so has part: feature:372212-372353:-1:exon
so has part: feature:370116-370294:-1:exon

XP_034769256.1
type: Protein
SIO_000068: ncbiprotein

position:370116:-1
position: 370116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419457:-1
position: 419457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419167-419457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:417467-417613:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:380418-380660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:380034-380071:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:378930-379078:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:378633-378739:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:377169-377430:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:372478-372653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:372212-372353:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:370116-370294:-1:exon

LOC117434268
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117434268
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(472576..607410)
location: region:472576-607410:-1
so has part: feature:472576-607410:-1:exon
subclass of: SO_0000010

117434268
type: Gene
SIO_000068: ncbigene

position:472576:-1
position: 472576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607410:-1
position: 607410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472576-607410:-1:exon

LOC117434268
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117434268
product: collagen alpha-1(XI) chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913366.1
SIO_010081: LOC117434268
subclass of: SO_0000673
so part of: LOC117434268
location: complement(join(472576..473017,477371..477604,477922..477990,478701..478795,480339..480636,481394..481447,486047..486082,486672..486725,487373..487534,487948..488001,491703..491810,496602..496655,499633..499686,500106..500159,503498..503551,505565..505672,506035..506088,508610..508663,509660..509713,510092..510145,511999..512106,514299..514352,514544..514597,517799..517906,521756..521809,522770..522967,525409..525462,526212..526265,528118..528171,528278..528322,529324..529377,532158..532202,532685..532738,538911..538964,539304..539411,542988..543041,543156..543200,544750..544803,544987..545031,545893..545946,546062..546106,546942..546995,547350..547394,548293..548346,553638..553682,555179..555232,555821..555874,556465..556518,560329..560382,560500..560553,567033..567089,569273..569359,570354..570428,572160..572222,572586..572627,573112..573165,577148..577354,577627..577642,577735..577838,581082..581216,585334..585651,590864..590989,593515..593677,596346..596556,600162..600326,607386..607410))
location: region:472576-607410:-1
so has part: feature:607386-607410:-1:exon
so has part: feature:600162-600326:-1:exon
so has part: feature:596346-596556:-1:exon
so has part: feature:593515-593677:-1:exon
so has part: feature:590864-590989:-1:exon
so has part: feature:585334-585651:-1:exon
so has part: feature:581082-581216:-1:exon
so has part: feature:577735-577838:-1:exon
so has part: feature:577627-577642:-1:exon
so has part: feature:577148-577354:-1:exon
so has part: feature:573112-573165:-1:exon
so has part: feature:572586-572627:-1:exon
so has part: feature:572160-572222:-1:exon
so has part: feature:570354-570428:-1:exon
so has part: feature:569273-569359:-1:exon
so has part: feature:567033-567089:-1:exon
so has part: feature:560500-560553:-1:exon
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LOC117434268
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117434268
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XI) chain
translation: MLKGERLLSDPVDVLKVLQLHTLPEGVQKAPGFCPTRRTGRSDVAYRISKQAQISAPTKQLFSGQFPENFSIMALVKARAGLQAFLLSVYNGQGVQQLGVELGRSPVFLYEDESGKPAPEDYPLFRGINLADGKWHRVALSVQKKDVTLILDCKKRITKPLPRSDKPSIDTKGIVVFGSRILDEEVFEGDIQQLLIASNPQAAYDYCEHYSPDCDTALPDIPQAQEAKDYKKSKAAVSHKDAVKAKSKPAASNGNAKTPPKNKNVSNDGKAPPSKKVPPKPAAATPVKTAAAKTPKAKVAAVKNTVSKAPIKKSAVAAAAATAGKTKKTPGNSYQQDVSTTHTVAGHTPSEADRTPYPEEEPEAGQELIGQGETGPPPIAEEEEVKVGSEAPAEELFTEEYVTGDSEAEAGPGATEDPEGGEEEVKVGSEAPAEELFTEEYVTGDSEAEAGPGATEYDYSYKDFKDYGPAHDNNPAQIGPALSAETEEGGAIVRGVKGEKGEPAVMEPGMLIEGPPGPEGPAGLPGPPGSTGPPGSIGDPGERGPTGRAGLPGADGLPGPPGSSIMLPFRFGMSAGEKGPIVSAQEAQAQAILQQARLALTGPPGPMGFTGRPGPLGTPGSPGLKGDSGDPGPQGPRGPQGLSGPPGKSGRRGRAGADGARGMPGESGSKGDRGFDGLPGLPGDKGHRGEPGALGPPGPLGEDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGIPGPPGVRGSDGPHGPKGNLGPQGEPGPPGQQGTSGTQGMPGPQGATGPPGEKGPVGKPGLPGMSGADGPPGHPGKEGPSGTKGNQGPNGPQGPIGYPGPRGVKGAEGVRGLKGHKGEKGEDGFPGFKGDLGVKGDRGELGVPGQRGEDGPEGPKGRVGPPGELGPIGLVGEKGKLGVPGLPGYPGRQGTKGSLGFPGFPGTNGEKGARGLIGKTGPRGQRGPTGPRGQRGPRGATGKPGAKGTSGSDGPAGPPGERGLPGPQGPNGFPGPKGPPGPSGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGPSGESGPLGERGHPGPSGPPGEQGLPGASGKEGTKGDPGPMGAPGKDGPAGLRGFPGERGLPGIAGGTGLKGNEGPAGPPGPAGSAGERGAAGQGGPIGPPGRPGPQGPPGAAGEKGVPGEIGEHGQKGAKGSKGEHGPPGPPGPMGPVGQPGAAGADGELGPRGQQGPFGAKGDEGPRGFPGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPSGADGPQGPPGGLGNPGNVGEKGEPGESGAPGVAGEPGAKGPRGERGEKGEAGQPGTAGPAGVKGPTGDDGPKGNPGPVGFPGDPGPPGELGPRGQDGAKGERGEDGEQGQAGSPGPTGENGPPGPPGKRGPAGTRGPEGRQGEKGSKGDPGANGPAGKTGPVGPQGPPGKPGTEGLRGIPGSVGEQGSPGVTGQRGPPGPIGPPGLPGLKGDPGAKGEKGHPGLIGLIGPPGEQGEKGDRGLAGPQGSHGAKGETGIAGPTGPLGPAGPPGLPGPVGVKGAKGASGQAGPKGEKGVAGPPGLPGPPGEVIQPLPIQMSPKRSRRSIDGSQLEEEGVQADAVLDYADTGMEEILGSLNSLKQELEHMRHPLGTKENPARTCRDLQLSQADFKDGERWERGDIEPNQGCARDSFKVFCNFTAGGETCIYPDKKIESVKMNSWSSETPGTWFSEFKHGSKFSYVDSEGEPLGVVQLTFLRLLSVSARQNFTYHCHHSVAWQHLGSDSFEQALHFQGANEEDMSYQTSPYIKAPLDGCAYRKGYDKTVLEVNTPVVVQLPVLDVMFTDFGEAKQKFGFDVGPVCFLG
SIO_010081: LOC117434268
subclass of: SO_0000673
so part of: LOC117434268
location: complement(join(472871..473017,477371..477604,477922..477990,478701..478795,480339..480636,481394..481447,486047..486082,486672..486725,487373..487534,487948..488001,491703..491810,496602..496655,499633..499686,500106..500159,503498..503551,505565..505672,506035..506088,508610..508663,509660..509713,510092..510145,511999..512106,514299..514352,514544..514597,517799..517906,521756..521809,522770..522967,525409..525462,526212..526265,528118..528171,528278..528322,529324..529377,532158..532202,532685..532738,538911..538964,539304..539411,542988..543041,543156..543200,544750..544803,544987..545031,545893..545946,546062..546106,546942..546995,547350..547394,548293..548346,553638..553682,555179..555232,555821..555874,556465..556518,560329..560382,560500..560553,567033..567089,569273..569359,570354..570428,572160..572222,572586..572627,573112..573165,577148..577354,577627..577642,577735..577838,581082..581216,585334..585651,590864..590989,593515..593677,596346..596556,600162..600326,607386..607410))
location: region:472871-607410:-1
so has part: feature:607386-607410:-1:exon
so has part: feature:600162-600326:-1:exon
so has part: feature:596346-596556:-1:exon
so has part: feature:593515-593677:-1:exon
so has part: feature:590864-590989:-1:exon
so has part: feature:585334-585651:-1:exon
so has part: feature:581082-581216:-1:exon
so has part: feature:577735-577838:-1:exon
so has part: feature:577627-577642:-1:exon
so has part: feature:577148-577354:-1:exon
so has part: feature:573112-573165:-1:exon
so has part: feature:572586-572627:-1:exon
so has part: feature:572160-572222:-1:exon
so has part: feature:570354-570428:-1:exon
so has part: feature:569273-569359:-1:exon
so has part: feature:567033-567089:-1:exon
so has part: feature:560500-560553:-1:exon
so has part: feature:560329-560382:-1:exon
so has part: feature:556465-556518:-1:exon
so has part: feature:555821-555874:-1:exon
so has part: feature:555179-555232:-1:exon
so has part: feature:553638-553682:-1:exon
so has part: feature:548293-548346:-1:exon
so has part: feature:547350-547394:-1:exon
so has part: feature:546942-546995:-1:exon
so has part: feature:546062-546106:-1:exon
so has part: feature:545893-545946:-1:exon
so has part: feature:544987-545031:-1:exon
so has part: feature:544750-544803:-1:exon
so has part: feature:543156-543200:-1:exon
so has part: feature:542988-543041:-1:exon
so has part: feature:539304-539411:-1:exon
so has part: feature:538911-538964:-1:exon
so has part: feature:532685-532738:-1:exon
so has part: feature:532158-532202:-1:exon
so has part: feature:529324-529377:-1:exon
so has part: feature:528278-528322:-1:exon
so has part: feature:528118-528171:-1:exon
so has part: feature:526212-526265:-1:exon
so has part: feature:525409-525462:-1:exon
so has part: feature:522770-522967:-1:exon
so has part: feature:521756-521809:-1:exon
so has part: feature:517799-517906:-1:exon
so has part: feature:514544-514597:-1:exon
so has part: feature:514299-514352:-1:exon
so has part: feature:511999-512106:-1:exon
so has part: feature:510092-510145:-1:exon
so has part: feature:509660-509713:-1:exon
so has part: feature:508610-508663:-1:exon
so has part: feature:506035-506088:-1:exon
so has part: feature:505565-505672:-1:exon
so has part: feature:503498-503551:-1:exon
so has part: feature:500106-500159:-1:exon
so has part: feature:499633-499686:-1:exon
so has part: feature:496602-496655:-1:exon
so has part: feature:491703-491810:-1:exon
so has part: feature:487948-488001:-1:exon
so has part: feature:487373-487534:-1:exon
so has part: feature:486672-486725:-1:exon
so has part: feature:486047-486082:-1:exon
so has part: feature:481394-481447:-1:exon
so has part: feature:480339-480636:-1:exon
so has part: feature:478701-478795:-1:exon
so has part: feature:477922-477990:-1:exon
so has part: feature:477371-477604:-1:exon
so has part: feature:472871-473017:-1:exon

XP_034769257.1
type: Protein
SIO_000068: ncbiprotein

position:472871:-1
position: 472871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607386-607410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:600162-600326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596346-596556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:593515-593677:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:590864-590989:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:585334-585651:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:581082-581216:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:577735-577838:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:577627-577642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:577148-577354:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:573112-573165:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:572586-572627:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:572160-572222:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:570354-570428:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:569273-569359:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:567033-567089:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:560500-560553:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:560329-560382:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:556465-556518:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:555821-555874:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:555179-555232:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:553638-553682:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:548293-548346:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:547350-547394:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:546942-546995:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:546062-546106:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:545893-545946:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:544987-545031:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:544750-544803:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:543156-543200:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:542988-543041:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:539304-539411:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:538911-538964:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:532685-532738:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:532158-532202:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:529324-529377:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:528278-528322:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:528118-528171:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:526212-526265:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:525409-525462:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:522770-522967:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:521756-521809:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:517799-517906:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:514544-514597:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:514299-514352:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:511999-512106:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:510092-510145:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:509660-509713:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:508610-508663:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:506035-506088:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:505565-505672:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:503498-503551:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:500106-500159:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:499633-499686:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:496602-496655:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:491703-491810:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:487948-488001:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:487373-487534:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:486672-486725:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:486047-486082:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:481394-481447:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:480339-480636:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:478701-478795:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:477922-477990:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:477371-477604:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:472871-473017:-1:exon

LOC117966728
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(610762..631681)
location: region:610762-631681:-1
so has part: feature:610762-631681:-1:exon
subclass of: SO_0000010

117966728
type: Gene
SIO_000068: ncbigene

position:610762:-1
position: 610762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631681:-1
position: 631681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610762-631681:-1:exon

LOC117966728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966728
product: retinoic acid receptor RXR-beta-A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913367.1
SIO_010081: LOC117966728
subclass of: SO_0000673
so part of: LOC117966728
location: complement(join(610762..612117,612607..612712,615982..616073,617898..618030,620551..620680,621406..621569,623949..623972,625346..625525,631618..631681))
location: region:610762-631681:-1
so has part: feature:631618-631681:-1:exon
so has part: feature:625346-625525:-1:exon
so has part: feature:623949-623972:-1:exon
so has part: feature:621406-621569:-1:exon
so has part: feature:620551-620680:-1:exon
so has part: feature:617898-618030:-1:exon
so has part: feature:615982-616073:-1:exon
so has part: feature:612607-612712:-1:exon
so has part: feature:610762-612117:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:631618-631681:-1:exon

position:631618:-1
position: 631618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:625346-625525:-1:exon

position:625346:-1
position: 625346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625525:-1
position: 625525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:623949-623972:-1:exon

position:623949:-1
position: 623949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623972:-1
position: 623972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:621406-621569:-1:exon

position:621406:-1
position: 621406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621569:-1
position: 621569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:620551-620680:-1:exon

position:620551:-1
position: 620551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620680:-1
position: 620680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:617898-618030:-1:exon

position:617898:-1
position: 617898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618030:-1
position: 618030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:615982-616073:-1:exon

position:615982:-1
position: 615982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616073:-1
position: 616073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:612607-612712:-1:exon

position:612607:-1
position: 612607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612712:-1
position: 612712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:610762-612117:-1:exon

position:612117:-1
position: 612117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117966728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoic acid receptor RXR-beta-A-like
translation: MVRGAVVWKEANLILTRHTVLGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLVDKRQRNRCQYCRYQKCLAMGMKREVVQDERQRTVQEERQRNKEKEGEVESTSGVNEEMPVEKILDAEMAVEQKTELHADGTASTANSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSNPSEVELLREKVYASLESYCKQRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
SIO_010081: LOC117966728
subclass of: SO_0000673
so part of: LOC117966728
location: complement(join(611970..612117,612607..612712,615982..616073,617898..618030,620551..620680,621406..621569,623949..623972,625346..625525,631618..631681))
location: region:611970-631681:-1
so has part: feature:631618-631681:-1:exon
so has part: feature:625346-625525:-1:exon
so has part: feature:623949-623972:-1:exon
so has part: feature:621406-621569:-1:exon
so has part: feature:620551-620680:-1:exon
so has part: feature:617898-618030:-1:exon
so has part: feature:615982-616073:-1:exon
so has part: feature:612607-612712:-1:exon
so has part: feature:611970-612117:-1:exon

XP_034769258.1
type: Protein
SIO_000068: ncbiprotein

position:611970:-1
position: 611970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631618-631681:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:625346-625525:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:623949-623972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621406-621569:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620551-620680:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617898-618030:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615982-616073:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:612607-612712:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:611970-612117:-1:exon

LOC117966766
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966766
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 636841..640105
location: region:636841-640105:1
so has part: feature:636841-640105:1:exon
subclass of: SO_0000011

117966766
type: Gene
SIO_000068: ncbigene

position:636841:1
position: 636841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640105:1
position: 640105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636841-640105:1:exon

LOC117966766
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117966766
product: uncharacterized LOC117966766
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004661776.1
SIO_010081: LOC117966766
subclass of: SO_0000673
so part of: LOC117966766
location: join(636841..636961,638815..638963,640053..640105)
location: region:636841-640105:1
so has part: feature:636841-636961:1:exon
so has part: feature:638815-638963:1:exon
so has part: feature:640053-640105:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:636841-636961:1:exon

position:636961:1
position: 636961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:638815-638963:1:exon

position:638815:1
position: 638815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638963:1
position: 638963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:640053-640105:1:exon

position:640053:1
position: 640053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117966765
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966765
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 644390..659411
location: region:644390-659411:1
so has part: feature:644390-659411:1:exon
subclass of: SO_0000010

117966765
type: Gene
SIO_000068: ncbigene

position:644390:1
position: 644390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659411:1
position: 659411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644390-659411:1:exon

LOC117966765
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966765
product: transmembrane channel-like protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913425.1
SIO_010081: LOC117966765
subclass of: SO_0000673
so part of: LOC117966765
location: join(644390..644455,645508..645656,647095..647242,648249..648416,648798..648961,650872..650998,653472..653569,654175..654358,656366..656496,657425..657580,658067..658145,658859..659411)
location: region:644390-659411:1
so has part: feature:644390-644455:1:exon
so has part: feature:645508-645656:1:exon
so has part: feature:647095-647242:1:exon
so has part: feature:648249-648416:1:exon
so has part: feature:648798-648961:1:exon
so has part: feature:650872-650998:1:exon
so has part: feature:653472-653569:1:exon
so has part: feature:654175-654358:1:exon
so has part: feature:656366-656496:1:exon
so has part: feature:657425-657580:1:exon
so has part: feature:658067-658145:1:exon
so has part: feature:658859-659411:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:644390-644455:1:exon

position:644455:1
position: 644455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:645508-645656:1:exon

position:645508:1
position: 645508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645656:1
position: 645656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:647095-647242:1:exon

position:647095:1
position: 647095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647242:1
position: 647242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:648249-648416:1:exon

position:648249:1
position: 648249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648416:1
position: 648416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:648798-648961:1:exon

position:648798:1
position: 648798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648961:1
position: 648961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:650872-650998:1:exon

position:650872:1
position: 650872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650998:1
position: 650998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:653472-653569:1:exon

position:653472:1
position: 653472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653569:1
position: 653569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:654175-654358:1:exon

position:654175:1
position: 654175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654358:1
position: 654358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:656366-656496:1:exon

position:656366:1
position: 656366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656496:1
position: 656496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:657425-657580:1:exon

position:657425:1
position: 657425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657580:1
position: 657580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:658067-658145:1:exon

position:658067:1
position: 658067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658145:1
position: 658145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:658859-659411:1:exon

position:658859:1
position: 658859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117966765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966765
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane channel-like protein 4
translation: MELSVLFYGYYQNSEVGVSSQFSYNVPLAYLLTCLFYILLSLTWIVLRSGSGFKLAVVTGDGDLSSYSMSMFCGWDFGLEGEQAARLKQNSIRYELQVELEEDALRRNAASRTLAQRVYLYTLRGVLNLLVVGLILAAFYCIYRASEQSSILQEDPSVKDNFFLLLLVQYLPSIVITAANFLVPSLCDIIIRFERYSMTMQIKLTLLRSVFLRLTSLGVLLYSLWNQITCGGEPRESACTRCDYNYAQYPCWETRVGQEMYKLMIFDFITGVVVILLVEFPRRMLVDHCSCKPLQLWGRQEFVVPENVLGLVYAQTVVWTGAFFCPFLPLINTVKFILLFYFKKLTLFQNCRPASRTFRSSTSNFFFLLVLLLGLGLACVPLGYSVAVIHPSFGCGPFRSLGRMWDVVPQSLTSLPKTAQSFFNFLGSQAFAVPLFLLSCLVFSYMAAMASVYGNNVAQLKAQLKLEGRDKQFLVKRISELTPANQKKSAGPSGSVVDISETRELWE
SIO_010081: LOC117966765
subclass of: SO_0000673
so part of: LOC117966765
location: join(645514..645656,647095..647242,648249..648416,648798..648961,650872..650998,653472..653569,654175..654358,656366..656496,657425..657580,658067..658145,658859..658984)
location: region:645514-658984:1
so has part: feature:645514-645656:1:exon
so has part: feature:647095-647242:1:exon
so has part: feature:648249-648416:1:exon
so has part: feature:648798-648961:1:exon
so has part: feature:650872-650998:1:exon
so has part: feature:653472-653569:1:exon
so has part: feature:654175-654358:1:exon
so has part: feature:656366-656496:1:exon
so has part: feature:657425-657580:1:exon
so has part: feature:658067-658145:1:exon
so has part: feature:658859-658984:1:exon

XP_034769316.1
type: Protein
SIO_000068: ncbiprotein

position:645514:1
position: 645514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658984:1
position: 658984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645514-645656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:647095-647242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:648249-648416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648798-648961:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650872-650998:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:653472-653569:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654175-654358:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:656366-656496:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:657425-657580:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:658067-658145:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:658859-658984:1:exon

LOC117966739
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966739
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 662711..671037
location: region:662711-671037:1
so has part: feature:662711-671037:1:exon
subclass of: SO_0000010

117966739
type: Gene
SIO_000068: ncbigene

position:662711:1
position: 662711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671037:1
position: 671037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662711-671037:1:exon

LOC117966739
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966739
product: leukocyte receptor cluster member 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034913383.1
SIO_010081: LOC117966739
subclass of: SO_0000673
so part of: LOC117966739
location: join(662711..662954,663996..664184,666363..666525,669308..669461,670529..671037)
location: region:662711-671037:1
so has part: feature:662711-662954:1:exon
so has part: feature:663996-664184:1:exon
so has part: feature:666363-666525:1:exon
so has part: feature:669308-669461:1:exon
so has part: feature:670529-671037:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662711-662954:1:exon

position:662954:1
position: 662954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:663996-664184:1:exon

position:663996:1
position: 663996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664184:1
position: 664184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:666363-666525:1:exon

position:666363:1
position: 666363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666525:1
position: 666525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:669308-669461:1:exon

position:669308:1
position: 669308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669461:1
position: 669461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:670529-671037:1:exon

position:670529:1
position: 670529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117966739
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966739
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukocyte receptor cluster member 1-like
translation: MNILPKKSWHVRNKDNVARVRKDEAQAAEEARERQRRVERAEQEARTNFLRNKSRSSLPESGNAALGGEEEGEKEGERHLDLFGERDLGGGEKRGNKEYEADKKQEQEKRERAIGLLVSLGPAPGTATPWYLKEQGSEKEGAQTTGKQEETNRAKKQRTEPERASEKEKKDEKLKALLDPLRDMERIMKKKRKSEKKEERKSKERRREEAGGSSSLERLREERRRREATERLRAQALLKKGNEAEGKVKGEEEEDDRSRPYSSQYHPELSRKRQRRDMGSDPYGFNTKQN
SIO_010081: LOC117966739
subclass of: SO_0000673
so part of: LOC117966739
location: join(662823..662954,663996..664184,666363..666525,669308..669461,670529..670763)
location: region:662823-670763:1
so has part: feature:662823-662954:1:exon
so has part: feature:663996-664184:1:exon
so has part: feature:666363-666525:1:exon
so has part: feature:669308-669461:1:exon
so has part: feature:670529-670763:1:exon

XP_034769274.1
type: Protein
SIO_000068: ncbiprotein

position:662823:1
position: 662823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670763:1
position: 670763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662823-662954:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663996-664184:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:666363-666525:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669308-669461:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670529-670763:1:exon

LOC117410026
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410026
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(674794..698203)
location: region:674794-698203:-1
so has part: feature:674794-698203:-1:exon
subclass of: SO_0000010

117410026
type: Gene
SIO_000068: ncbigene

position:674794:-1
position: 674794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698203:-1
position: 698203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674794-698203:-1:exon

LOC117410026
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410026
product: CCR4-NOT transcription complex subunit 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913504.1
SIO_010081: LOC117410026
subclass of: SO_0000673
so part of: LOC117410026
location: complement(join(674794..676807,677867..677992,678829..678961,679641..679842,681691..681790,681898..682075,683761..683866,684208..685129,686117..686173,686339..686472,687644..687857,689615..689710,690492..690620,691281..691370,691837..691911,693925..693992,694825..694900,698078..698203))
location: region:674794-698203:-1
so has part: feature:698078-698203:-1:exon
so has part: feature:694825-694900:-1:exon
so has part: feature:693925-693992:-1:exon
so has part: feature:691837-691911:-1:exon
so has part: feature:691281-691370:-1:exon
so has part: feature:690492-690620:-1:exon
so has part: feature:689615-689710:-1:exon
so has part: feature:687644-687857:-1:exon
so has part: feature:686339-686472:-1:exon
so has part: feature:686117-686173:-1:exon
so has part: feature:684208-685129:-1:exon
so has part: feature:683761-683866:-1:exon
so has part: feature:681898-682075:-1:exon
so has part: feature:681691-681790:-1:exon
so has part: feature:679641-679842:-1:exon
so has part: feature:678829-678961:-1:exon
so has part: feature:677867-677992:-1:exon
so has part: feature:674794-676807:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:698078-698203:-1:exon

position:698078:-1
position: 698078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:694825-694900:-1:exon

position:694825:-1
position: 694825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694900:-1
position: 694900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:693925-693992:-1:exon

position:693925:-1
position: 693925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693992:-1
position: 693992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:691837-691911:-1:exon

position:691837:-1
position: 691837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691911:-1
position: 691911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:691281-691370:-1:exon

position:691281:-1
position: 691281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691370:-1
position: 691370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:690492-690620:-1:exon

position:690492:-1
position: 690492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690620:-1
position: 690620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:689615-689710:-1:exon

position:689615:-1
position: 689615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689710:-1
position: 689710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:687644-687857:-1:exon

position:687644:-1
position: 687644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687857:-1
position: 687857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:686339-686472:-1:exon

position:686339:-1
position: 686339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686472:-1
position: 686472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:686117-686173:-1:exon

position:686117:-1
position: 686117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686173:-1
position: 686173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:684208-685129:-1:exon

position:684208:-1
position: 684208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685129:-1
position: 685129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:683761-683866:-1:exon

position:683761:-1
position: 683761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683866:-1
position: 683866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:681898-682075:-1:exon

position:681898:-1
position: 681898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682075:-1
position: 682075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:681691-681790:-1:exon

position:681691:-1
position: 681691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681790:-1
position: 681790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:679641-679842:-1:exon

position:679641:-1
position: 679641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679842:-1
position: 679842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:678829-678961:-1:exon

position:678829:-1
position: 678829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678961:-1
position: 678961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:677867-677992:-1:exon

position:677867:-1
position: 677867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677992:-1
position: 677992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:674794-676807:-1:exon

position:676807:-1
position: 676807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117410026
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410026
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCR4-NOT transcription complex subunit 3-like
translation: MADKRKLQGEIDRCLKKVTEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRDQIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLALKVDPAQKEKEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDERIEELKGFIEKHRHHICMLETILRMLDNDSIQVDSIRKIKDDVEYYVDSSQDPDFEENEFLYDDIDLEDIPLPLVATSPPGVSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEISQSPVKNGSTSSSTSIPSCGSSSGAVITVGGGGSGSNSSSALFPVGGSGSSTSSTLLGNIITSSSLSHTFNTQSPHQNPKTSSTATAASSLSLNSPSSLMLLSNSAAGGANTNSISTAMANLGVVGNSIIGSHSSLLSSNMQPGIIGNNGGNGGSGLGLGLGLGLGKSVSGSSLAQLAGLGLGNITGMGGLSSMGLGGLGNPPTPYAQAAASGNVGLIGGNSNSNSNTMMGVSSGGHGPIGSAPGGGGGSGGNSNGGSGSSSSSSSSSSAQGGAVGERERSASSSSNSTGSSSGIPGRPPSGQKQNGATSYSAVVADSTQDSALNSTSQSQSSQPGSHNTPANAAKESVGGSQLPSVTGSSSNSSLLVQMPINPPSSPSPSFSETKPSQNLLNGPLNYTQPEIKPPEPLSSLKSMAERAALGSGLEEQIPSLRLTDRDLFSSSTAPPGGPAVPPQTQLSEVNIPPSLGVCPLGPVPLSKEQLYQQAMQESAWTHMPHPSDSERIRQYLMRNPCPTPPYHHQVPPPHSDSVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
SIO_010081: LOC117410026
subclass of: SO_0000673
so part of: LOC117410026
location: complement(join(676709..676807,677867..677992,678829..678961,679641..679842,681691..681790,681898..682075,683761..683866,684208..685129,686117..686173,686339..686472,687644..687857,689615..689710,690492..690620,691281..691370,691837..691911,693925..693992,694825..694849))
location: region:676709-694849:-1
so has part: feature:694825-694849:-1:exon
so has part: feature:693925-693992:-1:exon
so has part: feature:691837-691911:-1:exon
so has part: feature:691281-691370:-1:exon
so has part: feature:690492-690620:-1:exon
so has part: feature:689615-689710:-1:exon
so has part: feature:687644-687857:-1:exon
so has part: feature:686339-686472:-1:exon
so has part: feature:686117-686173:-1:exon
so has part: feature:684208-685129:-1:exon
so has part: feature:683761-683866:-1:exon
so has part: feature:681898-682075:-1:exon
so has part: feature:681691-681790:-1:exon
so has part: feature:679641-679842:-1:exon
so has part: feature:678829-678961:-1:exon
so has part: feature:677867-677992:-1:exon
so has part: feature:676709-676807:-1:exon

XP_034769395.1
type: Protein
SIO_000068: ncbiprotein

position:676709:-1
position: 676709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694849:-1
position: 694849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694825-694849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693925-693992:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:691837-691911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:691281-691370:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:690492-690620:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:689615-689710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:687644-687857:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:686339-686472:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:686117-686173:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:684208-685129:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:683761-683866:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:681898-682075:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:681691-681790:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:679641-679842:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:678829-678961:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:677867-677992:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:676709-676807:-1:exon

LOC117410034
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(701308..721392)
location: region:701308-721392:-1
so has part: feature:701308-721392:-1:exon
subclass of: SO_0000010

117410034
type: Gene
SIO_000068: ncbigene

position:701308:-1
position: 701308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721392:-1
position: 721392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701308-721392:-1:exon

LOC117410034
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410034
product: U4/U6 small nuclear ribonucleoprotein Prp31
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913368.1
SIO_010081: LOC117410034
subclass of: SO_0000673
so part of: LOC117410034
location: complement(join(701308..702639,702799..702897,704207..704335,705352..705424,705577..705704,707371..707460,708170..708364,710174..710297,711227..711333,712556..712653,715046..715129,716922..716982,717287..717313,718054..718177,721218..721392))
location: region:701308-721392:-1
so has part: feature:721218-721392:-1:exon
so has part: feature:718054-718177:-1:exon
so has part: feature:717287-717313:-1:exon
so has part: feature:716922-716982:-1:exon
so has part: feature:715046-715129:-1:exon
so has part: feature:712556-712653:-1:exon
so has part: feature:711227-711333:-1:exon
so has part: feature:710174-710297:-1:exon
so has part: feature:708170-708364:-1:exon
so has part: feature:707371-707460:-1:exon
so has part: feature:705577-705704:-1:exon
so has part: feature:705352-705424:-1:exon
so has part: feature:704207-704335:-1:exon
so has part: feature:702799-702897:-1:exon
so has part: feature:701308-702639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721218-721392:-1:exon

position:721218:-1
position: 721218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:718054-718177:-1:exon

position:718054:-1
position: 718054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718177:-1
position: 718177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:717287-717313:-1:exon

position:717287:-1
position: 717287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717313:-1
position: 717313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:716922-716982:-1:exon

position:716922:-1
position: 716922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716982:-1
position: 716982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:715046-715129:-1:exon

position:715046:-1
position: 715046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715129:-1
position: 715129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:712556-712653:-1:exon

position:712556:-1
position: 712556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712653:-1
position: 712653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:711227-711333:-1:exon

position:711227:-1
position: 711227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711333:-1
position: 711333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:710174-710297:-1:exon

position:710174:-1
position: 710174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710297:-1
position: 710297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:708170-708364:-1:exon

position:708170:-1
position: 708170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708364:-1
position: 708364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:707371-707460:-1:exon

position:707371:-1
position: 707371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707460:-1
position: 707460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:705577-705704:-1:exon

position:705577:-1
position: 705577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705704:-1
position: 705704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:705352-705424:-1:exon

position:705352:-1
position: 705352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705424:-1
position: 705424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:704207-704335:-1:exon

position:704207:-1
position: 704207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704335:-1
position: 704335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:702799-702897:-1:exon

position:702799:-1
position: 702799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702897:-1
position: 702897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:701308-702639:-1:exon

position:702639:-1
position: 702639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117410034
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6 small nuclear ribonucleoprotein Prp31
translation: MSLADELLADLEEARDEEERGDGEGGSGLGEEFSDIMEGFRFSDIMEKVGEYVEKQRKSSEVTGPVEADPEYRLIVDANNLTVEIDNELNIIHKFVRDKYSKRFPELESLVPNSLDYIRTVQELGNNLDKCKNNENLQQILTNATIMVVSVTASTTQGTMLAEDELIRLVEACDMALELNQSKHRIYEYVESRMSFIAQPSSLIFTPLSSAGVAGGLTNLSKMPACNLMLLGAQRRSLSGFSTTSLLPHTGYIYHSDIVQALPTDLRRKAARLVSAKCTLAARVDSFHESTDGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRKQANRMTFAEIEEDAYQEDLGFSLGQLGKSGSGRVRQAQVNEVTKARISKSLQRTLQKQSMVYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQAAEKKVAEANQKYFSNMAEFLKVKREADSKP
SIO_010081: LOC117410034
subclass of: SO_0000673
so part of: LOC117410034
location: complement(join(702520..702639,702799..702897,704207..704335,705352..705424,705577..705704,707371..707460,708170..708364,710174..710297,711227..711333,712556..712653,715046..715129,716922..716982,717287..717313,718054..718149))
location: region:702520-718149:-1
so has part: feature:718054-718149:-1:exon
so has part: feature:717287-717313:-1:exon
so has part: feature:716922-716982:-1:exon
so has part: feature:715046-715129:-1:exon
so has part: feature:712556-712653:-1:exon
so has part: feature:711227-711333:-1:exon
so has part: feature:710174-710297:-1:exon
so has part: feature:708170-708364:-1:exon
so has part: feature:707371-707460:-1:exon
so has part: feature:705577-705704:-1:exon
so has part: feature:705352-705424:-1:exon
so has part: feature:704207-704335:-1:exon
so has part: feature:702799-702897:-1:exon
so has part: feature:702520-702639:-1:exon

XP_034769259.1
type: Protein
SIO_000068: ncbiprotein

position:702520:-1
position: 702520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718149:-1
position: 718149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718054-718149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:717287-717313:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:716922-716982:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:715046-715129:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:712556-712653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:711227-711333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:710174-710297:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:708170-708364:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707371-707460:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:705577-705704:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:705352-705424:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:704207-704335:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:702799-702897:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:702520-702639:-1:exon

LOC117966771
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966771
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(727677..736017)
location: region:727677-736017:-1
so has part: feature:727677-736017:-1:exon
subclass of: SO_0000010

117966771
type: Gene
SIO_000068: ncbigene

position:727677:-1
position: 727677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736017:-1
position: 736017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727677-736017:-1:exon

LOC117966771
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966771
product: serine/threonine-protein kinase LMTK3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034913433.1
SIO_010081: LOC117966771
subclass of: SO_0000673
so part of: LOC117966771
location: complement(join(727677..727912,728180..728288,730316..730640,734490..734710,735371..735549,735935..736017))
location: region:727677-736017:-1
so has part: feature:735935-736017:-1:exon
so has part: feature:735371-735549:-1:exon
so has part: feature:734490-734710:-1:exon
so has part: feature:730316-730640:-1:exon
so has part: feature:728180-728288:-1:exon
so has part: feature:727677-727912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:735935-736017:-1:exon

position:735935:-1
position: 735935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:735371-735549:-1:exon

position:735371:-1
position: 735371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735549:-1
position: 735549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:734490-734710:-1:exon

position:734490:-1
position: 734490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734710:-1
position: 734710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:730316-730640:-1:exon

position:730316:-1
position: 730316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730640:-1
position: 730640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:728180-728288:-1:exon

position:728180:-1
position: 728180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728288:-1
position: 728288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:727677-727912:-1:exon

position:727912:-1
position: 727912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117966771
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966771
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase LMTK3-like
translation: MMQVCEERLQFSLRENVNRNVLSGGCVTERVELRPWGHPGSVPALPAKERASEKEGELPDSLRNQSSDCLEPTANDIAEDHRTSRNDDTVSAPEAKEAGTLEEPPADDITNGPPKLPIGPDPETTPPQPQHIQSMKAKLARLSLSLPPLTLDLSLTTSPKSLWGREQDEEEGPGHGAGSDPEDEEDGGAGPVIVVTETETDRRHSLRSLLKSPRSLEEHAERERERERRRNVSFLMMSPSICSTRKSPPMSSVLALPRQAPPLPMMQQESLAPTPSWMTDWVAAACSGRMSFQRPRRQSLI
SIO_010081: LOC117966771
subclass of: SO_0000673
so part of: LOC117966771
location: complement(join(727850..727912,728180..728288,730316..730640,734490..734710,735371..735549,735935..735943))
location: region:727850-735943:-1
so has part: feature:735935-735943:-1:exon
so has part: feature:735371-735549:-1:exon
so has part: feature:734490-734710:-1:exon
so has part: feature:730316-730640:-1:exon
so has part: feature:728180-728288:-1:exon
so has part: feature:727850-727912:-1:exon

XP_034769324.1
type: Protein
SIO_000068: ncbiprotein

position:727850:-1
position: 727850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735943:-1
position: 735943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735935-735943:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:735371-735549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:734490-734710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730316-730640:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:728180-728288:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:727850-727912:-1:exon

LOC117966729
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(739504..757131)
location: region:739504-757131:-1
so has part: feature:739504-757131:-1:exon
subclass of: SO_0000010

117966729
type: Gene
SIO_000068: ncbigene

position:739504:-1
position: 739504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757131:-1
position: 757131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:739504-757131:-1:exon

LOC117966729
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966729
product: serine/threonine-protein kinase LMTK3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034913369.1
SIO_010081: LOC117966729
subclass of: SO_0000673
so part of: LOC117966729
location: complement(join(739504..739636,740141..740259,741662..741735,742357..742495,744034..744170,756818..757131))
location: region:739504-757131:-1
so has part: feature:756818-757131:-1:exon
so has part: feature:744034-744170:-1:exon
so has part: feature:742357-742495:-1:exon
so has part: feature:741662-741735:-1:exon
so has part: feature:740141-740259:-1:exon
so has part: feature:739504-739636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:756818-757131:-1:exon

position:756818:-1
position: 756818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744034-744170:-1:exon

position:744034:-1
position: 744034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744170:-1
position: 744170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:742357-742495:-1:exon

position:742357:-1
position: 742357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742495:-1
position: 742495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:741662-741735:-1:exon

position:741662:-1
position: 741662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741735:-1
position: 741735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:740141-740259:-1:exon

position:740141:-1
position: 740141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740259:-1
position: 740259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:739504-739636:-1:exon

position:739636:-1
position: 739636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117966729
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase LMTK3-like
translation: MLARRWLVLYTAAVMSYFNPERALAAPQDNDGVVQSRAPPLSPPPYVVVLISCSGVFSFVLLLLACMCCKRGGGFNEFDNTVGEECSGGEGSPAAEDSSSSQSLPEVYILPLSQANHPSIQKGGGPQGFSRQNLSYLQEIGNGWFGKVILSEMFSEPSPAQAVVKELRVNAGPLEQRKFLTEAQPYRLQHPNILQCLGLCSETLPFLLVMEFCQLVSDTVCIRSTVSDEH
SIO_010081: LOC117966729
subclass of: SO_0000673
so part of: LOC117966729
location: complement(join(739504..739636,740141..740259,741662..741735,742357..742495,744034..744170,756818..756908))
location: region:739504-756908:-1
so has part: feature:756818-756908:-1:exon
so has part: feature:744034-744170:-1:exon
so has part: feature:742357-742495:-1:exon
so has part: feature:741662-741735:-1:exon
so has part: feature:740141-740259:-1:exon
so has part: feature:739504-739636:-1:exon

XP_034769260.1
type: Protein
SIO_000068: ncbiprotein

position:756908:-1
position: 756908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:756818-756908:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744034-744170:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:742357-742495:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:741662-741735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:740141-740259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739504-739636:-1:exon

LOC117966767
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(765071..773748)
location: region:765071-773748:-1
so has part: feature:765071-773748:-1:exon
subclass of: SO_0000010

117966767
type: Gene
SIO_000068: ncbigene

position:765071:-1
position: 765071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773748:-1
position: 773748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765071-773748:-1:exon

LOC117966767
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966767
product: TCF3 fusion partner homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034913428.1
SIO_010081: LOC117966767
subclass of: SO_0000673
so part of: LOC117966767
location: complement(join(765071..765250,765644..765712,765767..765793,767367..767436,768890..768960,770479..770705,773615..773748))
location: region:765071-773748:-1
so has part: feature:773615-773748:-1:exon
so has part: feature:770479-770705:-1:exon
so has part: feature:768890-768960:-1:exon
so has part: feature:767367-767436:-1:exon
so has part: feature:765767-765793:-1:exon
so has part: feature:765644-765712:-1:exon
so has part: feature:765071-765250:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:773615-773748:-1:exon

position:773615:-1
position: 773615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:770479-770705:-1:exon

position:770479:-1
position: 770479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770705:-1
position: 770705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:768890-768960:-1:exon

position:768890:-1
position: 768890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768960:-1
position: 768960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:767367-767436:-1:exon

position:767367:-1
position: 767367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767436:-1
position: 767436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:765767-765793:-1:exon

position:765767:-1
position: 765767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765793:-1
position: 765793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:765644-765712:-1:exon

position:765644:-1
position: 765644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765712:-1
position: 765712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:765071-765250:-1:exon

position:765250:-1
position: 765250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117966767
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966767
product: TCF3 fusion partner homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034913427.1
SIO_010081: LOC117966767
subclass of: SO_0000673
so part of: LOC117966767
location: complement(join(765071..765250,765644..765793,767367..767436,768890..768960,770479..770705,773615..773744))
location: region:765071-773744:-1
so has part: feature:773615-773744:-1:exon
so has part: feature:770479-770705:-1:exon
so has part: feature:768890-768960:-1:exon
so has part: feature:767367-767436:-1:exon
so has part: feature:765644-765793:-1:exon
so has part: feature:765071-765250:-1:exon

position:773744:-1
position: 773744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:773615-773744:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:770479-770705:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:768890-768960:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:767367-767436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765644-765793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:765071-765250:-1:exon

LOC117966767
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966767
product: TCF3 fusion partner homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034913429.1
SIO_010081: LOC117966767
subclass of: SO_0000673
so part of: LOC117966767
location: complement(join(765071..765250,765644..765793,767367..767436,768890..768960,770479..770705,773516..773599))
location: region:765071-773599:-1
so has part: feature:773516-773599:-1:exon
so has part: feature:770479-770705:-1:exon
so has part: feature:768890-768960:-1:exon
so has part: feature:767367-767436:-1:exon
so has part: feature:765644-765793:-1:exon
so has part: feature:765071-765250:-1:exon

position:773599:-1
position: 773599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:773516-773599:-1:exon

position:773516:-1
position: 773516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:770479-770705:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:768890-768960:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:767367-767436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765644-765793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:765071-765250:-1:exon

LOC117966767
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TCF3 fusion partner homolog isoform X2
translation: MMEDFSDLALPPLFGGHILEAELETEGVEFVDGGGVSESQVEEESQERERRESERERDRRKYCNLSRRCREIEQVNERTLNRLHQVQKLSRQLKKERRFLMKTLNSYGDDYRSAQLTFLLEEELSGTADSALLQSASSNKRKRHRAAKEKEAQLEGEMSSHSETHVSGYCSGSSPVQRTPSDFP
SIO_010081: LOC117966767
subclass of: SO_0000673
so part of: LOC117966767
location: complement(join(765155..765250,765644..765712,765767..765793,767367..767436,768890..768960,770479..770700))
location: region:765155-770700:-1
so has part: feature:770479-770700:-1:exon
so has part: feature:768890-768960:-1:exon
so has part: feature:767367-767436:-1:exon
so has part: feature:765767-765793:-1:exon
so has part: feature:765644-765712:-1:exon
so has part: feature:765155-765250:-1:exon

XP_034769319.1
type: Protein
SIO_000068: ncbiprotein

position:765155:-1
position: 765155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770700:-1
position: 770700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770479-770700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:768890-768960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:767367-767436:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765767-765793:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765644-765712:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:765155-765250:-1:exon

LOC117966767
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TCF3 fusion partner homolog isoform X1
translation: MMEDFSDLALPPLFGGHILEAELETEGVEFVDGGGVSESQVEEESQERERRESERERDRRKYCNLSRRCREIEQVNERTLNRLHQVQKLSRQLKKERRFLMKTLNSYGDDYRSAQLTFLLEEELSGTADSAHREEGEGPEEAAGSSPSALLQSASSNKRKRHRAAKEKEAQLEGEMSSHSETHVSGYCSGSSPVQRTPSDFP
SIO_010081: LOC117966767
subclass of: SO_0000673
so part of: LOC117966767
location: complement(join(765155..765250,765644..765793,767367..767436,768890..768960,770479..770700))
location: region:765155-770700:-1
so has part: feature:770479-770700:-1:exon
so has part: feature:768890-768960:-1:exon
so has part: feature:767367-767436:-1:exon
so has part: feature:765644-765793:-1:exon
so has part: feature:765155-765250:-1:exon

XP_034769318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:770479-770700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:768890-768960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:767367-767436:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765644-765793:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765155-765250:-1:exon

LOC117966767
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966767
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TCF3 fusion partner homolog isoform X1
translation: MMEDFSDLALPPLFGGHILEAELETEGVEFVDGGGVSESQVEEESQERERRESERERDRRKYCNLSRRCREIEQVNERTLNRLHQVQKLSRQLKKERRFLMKTLNSYGDDYRSAQLTFLLEEELSGTADSAHREEGEGPEEAAGSSPSALLQSASSNKRKRHRAAKEKEAQLEGEMSSHSETHVSGYCSGSSPVQRTPSDFP
SIO_010081: LOC117966767
subclass of: SO_0000673
so part of: LOC117966767
location: complement(join(765155..765250,765644..765793,767367..767436,768890..768960,770479..770700))
location: region:765155-770700:-1
so has part: feature:770479-770700:-1:exon
so has part: feature:768890-768960:-1:exon
so has part: feature:767367-767436:-1:exon
so has part: feature:765644-765793:-1:exon
so has part: feature:765155-765250:-1:exon

XP_034769320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:770479-770700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:768890-768960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:767367-767436:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765644-765793:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765155-765250:-1:exon

LOC117966698
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 774481..779222
location: region:774481-779222:1
so has part: feature:774481-779222:1:exon
subclass of: SO_0000010

117966698
type: Gene
SIO_000068: ncbigene

position:774481:1
position: 774481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779222:1
position: 779222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774481-779222:1:exon

LOC117966698
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966698
product: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034913309.1
SIO_010081: LOC117966698
subclass of: SO_0000673
so part of: LOC117966698
location: join(774481..774522,775235..775309,777359..777436,779090..779222)
location: region:774481-779222:1
so has part: feature:774481-774522:1:exon
so has part: feature:775235-775309:1:exon
so has part: feature:777359-777436:1:exon
so has part: feature:779090-779222:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:774481-774522:1:exon

position:774522:1
position: 774522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:775235-775309:1:exon

position:775235:1
position: 775235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775309:1
position: 775309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:777359-777436:1:exon

position:777359:1
position: 777359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777436:1
position: 777436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:779090-779222:1:exon

position:779090:1
position: 779090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117966698
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3-like
translation: MAGRLGSFLKNVWSKEPVVTAACGIGLLAVILPLVSPYTKYAGMMNAAVPYNYPVPVRDNGALPNVPKHPCDPEGPSLDWLKKM
SIO_010081: LOC117966698
subclass of: SO_0000673
so part of: LOC117966698
location: join(774513..774522,775235..775309,777359..777436,779090..779181)
location: region:774513-779181:1
so has part: feature:774513-774522:1:exon
so has part: feature:775235-775309:1:exon
so has part: feature:777359-777436:1:exon
so has part: feature:779090-779181:1:exon

XP_034769200.1
type: Protein
SIO_000068: ncbiprotein

position:774513:1
position: 774513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779181:1
position: 779181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774513-774522:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775235-775309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:777359-777436:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:779090-779181:1:exon

LOC117966710
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966710
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 789713..797015
location: region:789713-797015:1
so has part: feature:789713-797015:1:exon
subclass of: SO_0000011

117966710
type: Gene
SIO_000068: ncbigene

position:789713:1
position: 789713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797015:1
position: 797015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:789713-797015:1:exon

LOC117966710
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117966710
product: uncharacterized LOC117966710
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004661766.1
SIO_010081: LOC117966710
subclass of: SO_0000673
so part of: LOC117966710
location: join(789713..789866,792187..792333,796978..797015)
location: region:789713-797015:1
so has part: feature:789713-789866:1:exon
so has part: feature:792187-792333:1:exon
so has part: feature:796978-797015:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:789713-789866:1:exon

position:789866:1
position: 789866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:792187-792333:1:exon

position:792187:1
position: 792187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792333:1
position: 792333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:796978-797015:1:exon

position:796978:1
position: 796978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117966730
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(797712..817157)
location: region:797712-817157:-1
so has part: feature:797712-817157:-1:exon
subclass of: SO_0000010

117966730
type: Gene
SIO_000068: ncbigene

position:797712:-1
position: 797712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817157:-1
position: 817157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:797712-817157:-1:exon

LOC117966730
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966730
product: serine/threonine-protein kinase LMTK3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913370.1
SIO_010081: LOC117966730
subclass of: SO_0000673
so part of: LOC117966730
location: complement(join(797712..797762,797971..798059,798678..798816,802403..802539,817003..817157))
location: region:797712-817157:-1
so has part: feature:817003-817157:-1:exon
so has part: feature:802403-802539:-1:exon
so has part: feature:798678-798816:-1:exon
so has part: feature:797971-798059:-1:exon
so has part: feature:797712-797762:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:817003-817157:-1:exon

position:817003:-1
position: 817003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:802403-802539:-1:exon

position:802403:-1
position: 802403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802539:-1
position: 802539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:798678-798816:-1:exon

position:798678:-1
position: 798678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798816:-1
position: 798816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:797971-798059:-1:exon

position:797971:-1
position: 797971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798059:-1
position: 798059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:797712-797762:-1:exon

position:797762:-1
position: 797762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117966730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase LMTK3-like
translation: MLARRWLVLYTAAVMSYFNPERALAAPQDNDGVVQSRAPPLSPPPYVVVLISCSGVFSFVLLLLACMCCKRGGGFNEFDNTEGEECSGGEGSPAAEDSSSSQSLPEVYILPLSQANHPSIQKGWGPARFQSVRTFRANLSYLQEIGNGWFGKNECVVTVRDPSLRAIK
SIO_010081: LOC117966730
subclass of: SO_0000673
so part of: LOC117966730
location: complement(join(797712..797762,797971..798059,798678..798816,802403..802539,817003..817093))
location: region:797712-817093:-1
so has part: feature:817003-817093:-1:exon
so has part: feature:802403-802539:-1:exon
so has part: feature:798678-798816:-1:exon
so has part: feature:797971-798059:-1:exon
so has part: feature:797712-797762:-1:exon

XP_034769261.1
type: Protein
SIO_000068: ncbiprotein

position:817093:-1
position: 817093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817003-817093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:802403-802539:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:798678-798816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:797971-798059:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:797712-797762:-1:exon

LOC117410038
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(826614..834603)
location: region:826614-834603:-1
so has part: feature:826614-834603:-1:exon
subclass of: SO_0000010

117410038
type: Gene
SIO_000068: ncbigene

position:826614:-1
position: 826614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834603:-1
position: 834603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826614-834603:-1:exon

LOC117410038
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410038
product: TCF3 fusion partner homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034913337.1
SIO_010081: LOC117410038
subclass of: SO_0000673
so part of: LOC117410038
location: complement(join(826614..826781,827171..827243,827298..827320,828212..828281,829742..829812,831010..831236,834587..834603))
location: region:826614-834603:-1
so has part: feature:834587-834603:-1:exon
so has part: feature:831010-831236:-1:exon
so has part: feature:829742-829812:-1:exon
so has part: feature:828212-828281:-1:exon
so has part: feature:827298-827320:-1:exon
so has part: feature:827171-827243:-1:exon
so has part: feature:826614-826781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:834587-834603:-1:exon

position:834587:-1
position: 834587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:831010-831236:-1:exon

position:831010:-1
position: 831010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831236:-1
position: 831236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:829742-829812:-1:exon

position:829742:-1
position: 829742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829812:-1
position: 829812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:828212-828281:-1:exon

position:828212:-1
position: 828212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828281:-1
position: 828281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:827298-827320:-1:exon

position:827298:-1
position: 827298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827320:-1
position: 827320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:827171-827243:-1:exon

position:827171:-1
position: 827171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827243:-1
position: 827243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:826614-826781:-1:exon

position:826781:-1
position: 826781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117410038
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410038
product: TCF3 fusion partner homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034913334.1
SIO_010081: LOC117410038
subclass of: SO_0000673
so part of: LOC117410038
location: complement(join(826614..826781,827171..827320,828212..828281,829742..829812,831010..831236,834587..834603))
location: region:826614-834603:-1
so has part: feature:834587-834603:-1:exon
so has part: feature:831010-831236:-1:exon
so has part: feature:829742-829812:-1:exon
so has part: feature:828212-828281:-1:exon
so has part: feature:827171-827320:-1:exon
so has part: feature:826614-826781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:834587-834603:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:831010-831236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:829742-829812:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828212-828281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:827171-827320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:826614-826781:-1:exon

LOC117410038
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410038
product: TCF3 fusion partner homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034913335.1
SIO_010081: LOC117410038
subclass of: SO_0000673
so part of: LOC117410038
location: complement(join(826614..826781,827171..827320,828212..828281,829742..829812,831010..831236,833175..833303))
location: region:826614-833303:-1
so has part: feature:833175-833303:-1:exon
so has part: feature:831010-831236:-1:exon
so has part: feature:829742-829812:-1:exon
so has part: feature:828212-828281:-1:exon
so has part: feature:827171-827320:-1:exon
so has part: feature:826614-826781:-1:exon

position:833303:-1
position: 833303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833175-833303:-1:exon

position:833175:-1
position: 833175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:831010-831236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:829742-829812:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828212-828281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:827171-827320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:826614-826781:-1:exon

LOC117410038
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TCF3 fusion partner homolog isoform X2
translation: MMEDFSDLALPPLFGGHILEAELETEGVEFVDGGGVSESQVEEESQERERRESERERDRRKYCNLSRRCREIEQVNERTLNRLHQVQKLSRQLKKERRFLMKTLNSYGDDYRSAQLTFLLEEELSGTADSALLQSASSNKRKRHRAAKEKEAQLEGEMSSHSETHVSGYCSGSSPTQRTPSDFP
SIO_010081: LOC117410038
subclass of: SO_0000673
so part of: LOC117410038
location: complement(join(826686..826781,827171..827243,827298..827320,828212..828281,829742..829812,831010..831231))
location: region:826686-831231:-1
so has part: feature:831010-831231:-1:exon
so has part: feature:829742-829812:-1:exon
so has part: feature:828212-828281:-1:exon
so has part: feature:827298-827320:-1:exon
so has part: feature:827171-827243:-1:exon
so has part: feature:826686-826781:-1:exon

XP_034769228.1
type: Protein
SIO_000068: ncbiprotein

position:826686:-1
position: 826686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831231:-1
position: 831231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:831010-831231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829742-829812:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:828212-828281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:827298-827320:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:827171-827243:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:826686-826781:-1:exon

LOC117410038
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TCF3 fusion partner homolog isoform X1
translation: MMEDFSDLALPPLFGGHILEAELETEGVEFVDGGGVSESQVEEESQERERRESERERDRRKYCNLSRRCREIEQVNERTLNRLHQVQKLSRQLKKERRFLMKTLNSYGDDYRSAQLTFLLEEELSGTADSAHREEGEGPEEAAGSSPSALLQSASSNKRKRHRAAKEKEAQLEGEMSSHSETHVSGYCSGSSPTQRTPSDFP
SIO_010081: LOC117410038
subclass of: SO_0000673
so part of: LOC117410038
location: complement(join(826686..826781,827171..827320,828212..828281,829742..829812,831010..831231))
location: region:826686-831231:-1
so has part: feature:831010-831231:-1:exon
so has part: feature:829742-829812:-1:exon
so has part: feature:828212-828281:-1:exon
so has part: feature:827171-827320:-1:exon
so has part: feature:826686-826781:-1:exon

XP_034769225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:831010-831231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829742-829812:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:828212-828281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:827171-827320:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826686-826781:-1:exon

LOC117410038
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TCF3 fusion partner homolog isoform X1
translation: MMEDFSDLALPPLFGGHILEAELETEGVEFVDGGGVSESQVEEESQERERRESERERDRRKYCNLSRRCREIEQVNERTLNRLHQVQKLSRQLKKERRFLMKTLNSYGDDYRSAQLTFLLEEELSGTADSAHREEGEGPEEAAGSSPSALLQSASSNKRKRHRAAKEKEAQLEGEMSSHSETHVSGYCSGSSPTQRTPSDFP
SIO_010081: LOC117410038
subclass of: SO_0000673
so part of: LOC117410038
location: complement(join(826686..826781,827171..827320,828212..828281,829742..829812,831010..831231))
location: region:826686-831231:-1
so has part: feature:831010-831231:-1:exon
so has part: feature:829742-829812:-1:exon
so has part: feature:828212-828281:-1:exon
so has part: feature:827171-827320:-1:exon
so has part: feature:826686-826781:-1:exon

XP_034769226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:831010-831231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829742-829812:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:828212-828281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:827171-827320:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826686-826781:-1:exon

LOC117966712
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966712
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(849459..851139)
location: region:849459-851139:-1
so has part: feature:849459-851139:-1:exon
subclass of: SO_0000011

117966712
type: Gene
SIO_000068: ncbigene

position:849459:-1
position: 849459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851139:-1
position: 851139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849459-851139:-1:exon

LOC117966712
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117966712
product: uncharacterized LOC117966712
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004661770.1
SIO_010081: LOC117966712
subclass of: SO_0000673
so part of: LOC117966712
location: complement(join(849459..849580,850046..850270,851003..851139))
location: region:849459-851139:-1
so has part: feature:851003-851139:-1:exon
so has part: feature:850046-850270:-1:exon
so has part: feature:849459-849580:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:851003-851139:-1:exon

position:851003:-1
position: 851003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:850046-850270:-1:exon

position:850046:-1
position: 850046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850270:-1
position: 850270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:849459-849580:-1:exon

position:849580:-1
position: 849580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117410041
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(865551..874943)
location: region:865551-874943:-1
so has part: feature:865551-874943:-1:exon
subclass of: SO_0000010

117410041
type: Gene
SIO_000068: ncbigene

position:865551:-1
position: 865551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874943:-1
position: 874943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:865551-874943:-1:exon

LOC117410041
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410041
product: TCF3 fusion partner homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913371.1
SIO_010081: LOC117410041
subclass of: SO_0000673
so part of: LOC117410041
location: complement(join(865551..865684,867574..867724,868621..868690,870154..870224,871576..871802,874888..874943))
location: region:865551-874943:-1
so has part: feature:874888-874943:-1:exon
so has part: feature:871576-871802:-1:exon
so has part: feature:870154-870224:-1:exon
so has part: feature:868621-868690:-1:exon
so has part: feature:867574-867724:-1:exon
so has part: feature:865551-865684:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:874888-874943:-1:exon

position:874888:-1
position: 874888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:871576-871802:-1:exon

position:871576:-1
position: 871576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871802:-1
position: 871802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:870154-870224:-1:exon

position:870154:-1
position: 870154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870224:-1
position: 870224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:868621-868690:-1:exon

position:868621:-1
position: 868621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868690:-1
position: 868690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:867574-867724:-1:exon

position:867574:-1
position: 867574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867724:-1
position: 867724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:865551-865684:-1:exon

position:865684:-1
position: 865684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117410041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TCF3 fusion partner homolog
translation: MMEDFSDLALPPLFGGHILEAELETEGVEFVDGGGVSESQVEEESQERERRESERERDRRKYCNLSRRCREIEQVNERTLNRLHQVQKLSRQLKKERRFLMKTLNSYGDDYRSAQLTFLLEEELSGTADSAHREEGEGPEEAAGSSPSALLQSASSNKRNGTVQPRRKRRADRKWASASMPASRDKEQRKRGRGYIRDLCSKNSGIKILQYSLGD
SIO_010081: LOC117410041
subclass of: SO_0000673
so part of: LOC117410041
location: complement(join(865551..865684,867574..867724,868621..868690,870154..870224,871576..871797))
location: region:865551-871797:-1
so has part: feature:871576-871797:-1:exon
so has part: feature:870154-870224:-1:exon
so has part: feature:868621-868690:-1:exon
so has part: feature:867574-867724:-1:exon
so has part: feature:865551-865684:-1:exon

XP_034769262.1
type: Protein
SIO_000068: ncbiprotein

position:871797:-1
position: 871797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871576-871797:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870154-870224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:868621-868690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:867574-867724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:865551-865684:-1:exon

LOC117410043
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410043
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 875798..879740
location: region:875798-879740:1
so has part: feature:875798-879740:1:exon
subclass of: SO_0000010

117410043
type: Gene
SIO_000068: ncbigene

position:875798:1
position: 875798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879740:1
position: 879740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875798-879740:1:exon

LOC117410043
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410043
product: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034016408.2
SIO_010081: LOC117410043
subclass of: SO_0000673
so part of: LOC117410043
location: join(875798..875856,876654..876728,878034..878111,879547..879740)
location: region:875798-879740:1
so has part: feature:875798-875856:1:exon
so has part: feature:876654-876728:1:exon
so has part: feature:878034-878111:1:exon
so has part: feature:879547-879740:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:875798-875856:1:exon

position:875856:1
position: 875856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:876654-876728:1:exon

position:876654:1
position: 876654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876728:1
position: 876728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:878034-878111:1:exon

position:878034:1
position: 878034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878111:1
position: 878111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:879547-879740:1:exon

position:879547:1
position: 879547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117410043
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410043
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3-like
translation: MAGRLGSFLKNVWSKEPVVTAACGIGLLAVILPLVSPYTKYAGMMNAAVPYNYPVPVRDNGALPNVPKHPCDPEGPSLDWLKKM
SIO_010081: LOC117410043
subclass of: SO_0000673
so part of: LOC117410043
location: join(875847..875856,876654..876728,878034..878111,879547..879638)
location: region:875847-879638:1
so has part: feature:875847-875856:1:exon
so has part: feature:876654-876728:1:exon
so has part: feature:878034-878111:1:exon
so has part: feature:879547-879638:1:exon

XP_033872299.1
type: Protein
SIO_000068: ncbiprotein

position:875847:1
position: 875847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879638:1
position: 879638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875847-875856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:876654-876728:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878034-878111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:879547-879638:1:exon

LOC117966711
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(925993..938172)
location: region:925993-938172:-1
so has part: feature:925993-938172:-1:exon
subclass of: SO_0000011

117966711
type: Gene
SIO_000068: ncbigene

position:925993:-1
position: 925993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938172:-1
position: 938172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:925993-938172:-1:exon

LOC117966711
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117966711
product: uncharacterized LOC117966711
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004661767.1
SIO_010081: LOC117966711
subclass of: SO_0000673
so part of: LOC117966711
location: complement(join(925993..926027,935267..935413,937967..938172))
location: region:925993-938172:-1
so has part: feature:937967-938172:-1:exon
so has part: feature:935267-935413:-1:exon
so has part: feature:925993-926027:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:937967-938172:-1:exon

position:937967:-1
position: 937967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:935267-935413:-1:exon

position:935267:-1
position: 935267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935413:-1
position: 935413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:925993-926027:-1:exon

position:926027:-1
position: 926027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117966713
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1003642..1004784
location: region:1003642-1004784:1
so has part: feature:1003642-1004784:1:exon
subclass of: SO_0000011

117966713
type: Gene
SIO_000068: ncbigene

position:1003642:1
position: 1003642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004784:1
position: 1004784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1003642-1004784:1:exon

LOC117966713
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117966713
product: uncharacterized LOC117966713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004661771.1
SIO_010081: LOC117966713
subclass of: SO_0000673
so part of: LOC117966713
location: join(1003642..1003669,1003812..1003838,1004649..1004784)
location: region:1003642-1004784:1
so has part: feature:1003642-1003669:1:exon
so has part: feature:1003812-1003838:1:exon
so has part: feature:1004649-1004784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1003642-1003669:1:exon

position:1003669:1
position: 1003669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1003812-1003838:1:exon

position:1003812:1
position: 1003812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003838:1
position: 1003838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1004649-1004784:1:exon

position:1004649:1
position: 1004649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117407808
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117407808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1025750..1162853
location: region:1025750-1162853:1
so has part: feature:1025750-1162853:1:exon
subclass of: SO_0000010

117407808
type: Gene
SIO_000068: ncbigene

position:1025750:1
position: 1025750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162853:1
position: 1162853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025750-1162853:1:exon

LOC117407808
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117407808
product: butyrophilin subfamily 3 member A1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913332.1
SIO_010081: LOC117407808
subclass of: SO_0000673
so part of: LOC117407808
location: join(1025750..1025842,1026802..1026875,1052266..1052613,1067430..1067711,1069722..1069829,1159629..1159655,1162696..1162853)
location: region:1025750-1162853:1
so has part: feature:1025750-1025842:1:exon
so has part: feature:1026802-1026875:1:exon
so has part: feature:1052266-1052613:1:exon
so has part: feature:1067430-1067711:1:exon
so has part: feature:1069722-1069829:1:exon
so has part: feature:1159629-1159655:1:exon
so has part: feature:1162696-1162853:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1025750-1025842:1:exon

position:1025842:1
position: 1025842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1026802-1026875:1:exon

position:1026802:1
position: 1026802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026875:1
position: 1026875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1052266-1052613:1:exon

position:1052266:1
position: 1052266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1052613:1
position: 1052613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1067430-1067711:1:exon

position:1067430:1
position: 1067430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067711:1
position: 1067711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1069722-1069829:1:exon

position:1069722:1
position: 1069722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069829:1
position: 1069829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1159629-1159655:1:exon

position:1159629:1
position: 1159629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1159655:1
position: 1159655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1162696-1162853:1:exon

position:1162696:1
position: 1162696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117407808
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117407808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 3 member A1-like
translation: MKMRFLGRTCLIVLSLLPAVSTQDAWHVVGSDQPVIAEPGEDVILPCHISPRLSAVDMEVRWFRDAFEKPVHLYLNKKDQPRRQDIPYQGRTALSPSALERGDISLHLRNLRPSDSGVYTCLADDGSWNEEGQTEVIVTALGTQPSISIDSTQGEQTRLVCRSEGWYPEPEVIWIDRDGNNVTSLSSTTLLSDSHGLRSVSSYIKIKQQSNVFSCLVRSKIPKPDWESKLHISSDFFPGVSGWMVAFFLTLALSIGAIPLLVIQRRRMDRTLKMYEVKAVLHLREEMGKSCVFGLLHGFITFLIKHQMCNEVITVGFDE
SIO_010081: LOC117407808
subclass of: SO_0000673
so part of: LOC117407808
location: join(1026806..1026875,1052266..1052613,1067430..1067711,1069722..1069829,1159629..1159655,1162696..1162820)
location: region:1026806-1162820:1
so has part: feature:1026806-1026875:1:exon
so has part: feature:1052266-1052613:1:exon
so has part: feature:1067430-1067711:1:exon
so has part: feature:1069722-1069829:1:exon
so has part: feature:1159629-1159655:1:exon
so has part: feature:1162696-1162820:1:exon

XP_034769223.1
type: Protein
SIO_000068: ncbiprotein

position:1026806:1
position: 1026806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162820:1
position: 1162820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026806-1026875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1052266-1052613:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1067430-1067711:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069722-1069829:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1159629-1159655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1162696-1162820:1:exon

LOC117398434
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398434
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1127761..1129954
location: region:1127761-1129954:1
so has part: feature:1127761-1129954:1:exon
subclass of: SO_0000011

117398434
type: Gene
SIO_000068: ncbigene

position:1127761:1
position: 1127761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1129954:1
position: 1129954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1127761-1129954:1:exon

LOC117398434
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117398434
product: uncharacterized LOC117398434
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004661768.1
SIO_010081: LOC117398434
subclass of: SO_0000673
so part of: LOC117398434
location: join(1127761..1127803,1129600..1129719,1129824..1129954)
location: region:1127761-1129954:1
so has part: feature:1127761-1127803:1:exon
so has part: feature:1129600-1129719:1:exon
so has part: feature:1129824-1129954:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1127761-1127803:1:exon

position:1127803:1
position: 1127803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1129600-1129719:1:exon

position:1129600:1
position: 1129600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1129719:1
position: 1129719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1129824-1129954:1:exon

position:1129824:1
position: 1129824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117410047
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410047
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1137829..1140107)
location: region:1137829-1140107:-1
so has part: feature:1137829-1140107:-1:exon
subclass of: SO_0000011

117410047
type: Gene
SIO_000068: ncbigene

position:1137829:-1
position: 1137829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140107:-1
position: 1140107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1137829-1140107:-1:exon

LOC117410047
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117410047
product: uncharacterized LOC117410047
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004661769.1
SIO_010081: LOC117410047
subclass of: SO_0000673
so part of: LOC117410047
location: complement(join(1137829..1137965,1138070..1138189,1139978..1140107))
location: region:1137829-1140107:-1
so has part: feature:1139978-1140107:-1:exon
so has part: feature:1138070-1138189:-1:exon
so has part: feature:1137829-1137965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1139978-1140107:-1:exon

position:1139978:-1
position: 1139978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1138070-1138189:-1:exon

position:1138070:-1
position: 1138070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138189:-1
position: 1138189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1137829-1137965:-1:exon

position:1137965:-1
position: 1137965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117407797
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117407797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1148375..1156837
location: region:1148375-1156837:1
so has part: feature:1148375-1156837:1:exon
subclass of: SO_0000010

117407797
type: Gene
SIO_000068: ncbigene

position:1148375:1
position: 1148375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156837:1
position: 1156837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1148375-1156837:1:exon

LOC117407797
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117407797
product: butyrophilin-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034913333.1
SIO_010081: LOC117407797
subclass of: SO_0000673
so part of: LOC117407797
location: join(1148375..1148531,1153575..1153648,1154287..1154634,1156440..1156837)
location: region:1148375-1156837:1
so has part: feature:1148375-1148531:1:exon
so has part: feature:1153575-1153648:1:exon
so has part: feature:1154287-1154634:1:exon
so has part: feature:1156440-1156837:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1148375-1148531:1:exon

position:1148531:1
position: 1148531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1153575-1153648:1:exon

position:1153575:1
position: 1153575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153648:1
position: 1153648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1154287-1154634:1:exon

position:1154287:1
position: 1154287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154634:1
position: 1154634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1156440-1156837:1:exon

position:1156440:1
position: 1156440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117407797
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117407797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin-like protein 2
translation: MKMRFLGRTCLIVLSLLPAVSTQDGSSVVGSDQPLIASPGEDIFLPCHITPSLSAVDMDVRWFRENFNIPVHLYEDRIDHSDVQDSDYRGRTALSRLGLQEGILSLNLRNLRHTDSGVYYCYAADGVWDGQGKTELIVRALGTQPSISMDSTQGEQTRLVCRSEGWSPEPEVIWRDSDGNNVTSLSNTTVQRDSQGFLSVNSYIKIKQQSSVFSCLVRSKTPKPDWESKLHISSEYHMFVD
SIO_010081: LOC117407797
subclass of: SO_0000673
so part of: LOC117407797
location: join(1153579..1153648,1154287..1154634,1156440..1156747)
location: region:1153579-1156747:1
so has part: feature:1153579-1153648:1:exon
so has part: feature:1154287-1154634:1:exon
so has part: feature:1156440-1156747:1:exon

XP_034769224.1
type: Protein
SIO_000068: ncbiprotein

position:1153579:1
position: 1153579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156747:1
position: 1156747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1153579-1153648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1154287-1154634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1156440-1156747:1:exon

LOC117409872
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117409872
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1164421..1185788)
location: region:1164421-1185788:-1
so has part: feature:1164421-1185788:-1:exon
subclass of: SO_0000010

117409872
type: Gene
SIO_000068: ncbigene

position:1164421:-1
position: 1164421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185788:-1
position: 1185788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164421-1185788:-1:exon

LOC117409872
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117409872
product: butyrophilin-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913372.1
SIO_010081: LOC117409872
subclass of: SO_0000673
so part of: LOC117409872
location: complement(join(1164421..1164596,1168436..1168495,1171216..1171497,1173959..1174306,1179530..1179606,1185674..1185788))
location: region:1164421-1185788:-1
so has part: feature:1185674-1185788:-1:exon
so has part: feature:1179530-1179606:-1:exon
so has part: feature:1173959-1174306:-1:exon
so has part: feature:1171216-1171497:-1:exon
so has part: feature:1168436-1168495:-1:exon
so has part: feature:1164421-1164596:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1185674-1185788:-1:exon

position:1185674:-1
position: 1185674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1179530-1179606:-1:exon

position:1179530:-1
position: 1179530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179606:-1
position: 1179606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1173959-1174306:-1:exon

position:1173959:-1
position: 1173959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174306:-1
position: 1174306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1171216-1171497:-1:exon

position:1171216:-1
position: 1171216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171497:-1
position: 1171497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1168436-1168495:-1:exon

position:1168436:-1
position: 1168436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168495:-1
position: 1168495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1164421-1164596:-1:exon

position:1164596:-1
position: 1164596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117409872
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117409872
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin-like protein 2
translation: MKMRFLGRTCLIVLSLLPAVSTQRDGSSVVGSDQPLITSPGEDVVLPCHITPSLGAVDMEVRWYRENFKIPVHLYEDRRDRTDVQDSDYRGRTALSRLGLEDGILSLNLRNLRPSDSGVYSCFATDGVWYGQGKTELIVRALGTQPSISMDSTQGEQTQLVCRSEGWSPEPEVIWRDRDGNDVTSLSNTTVQSDSQGFLSVSSYIKIKQQSNVFSCLVRSKTPKPDWESKLHISSDFFPGVSGWIVAFLLTLALNVFLPITFVFPFHCLYPANRSWAYVVALQPSSLLLLLFSSQSAHPLKSEPNTQLIKLI
SIO_010081: LOC117409872
subclass of: SO_0000673
so part of: LOC117409872
location: complement(join(1164421..1164596,1168436..1168495,1171216..1171497,1173959..1174306,1179530..1179602))
location: region:1164421-1179602:-1
so has part: feature:1179530-1179602:-1:exon
so has part: feature:1173959-1174306:-1:exon
so has part: feature:1171216-1171497:-1:exon
so has part: feature:1168436-1168495:-1:exon
so has part: feature:1164421-1164596:-1:exon

XP_034769263.1
type: Protein
SIO_000068: ncbiprotein

position:1179602:-1
position: 1179602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1179530-1179602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1173959-1174306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1171216-1171497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1168436-1168495:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1164421-1164596:-1:exon

LOC117398614
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398614
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1243251..1245101)
location: region:1243251-1245101:-1
so has part: feature:1243251-1245101:-1:exon
subclass of: SO_0000010

117398614
type: Gene
SIO_000068: ncbigene

position:1243251:-1
position: 1243251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1245101:-1
position: 1245101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1243251-1245101:-1:exon

LOC117398614
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398614
product: G2/M phase-specific E3 ubiquitin-protein ligase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034913373.1
SIO_010081: LOC117398614
subclass of: SO_0000673
so part of: LOC117398614
location: complement(join(1243251..1243444,1243864..1244156,1244608..1244718,1244989..1245101))
location: region:1243251-1245101:-1
so has part: feature:1244989-1245101:-1:exon
so has part: feature:1244608-1244718:-1:exon
so has part: feature:1243864-1244156:-1:exon
so has part: feature:1243251-1243444:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1244989-1245101:-1:exon

position:1244989:-1
position: 1244989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1244608-1244718:-1:exon

position:1244608:-1
position: 1244608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244718:-1
position: 1244718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1243864-1244156:-1:exon

position:1243864:-1
position: 1243864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244156:-1
position: 1244156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1243251-1243444:-1:exon

position:1243444:-1
position: 1243444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398614
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398614
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G2/M phase-specific E3 ubiquitin-protein ligase-like
translation: MSLWRYLKRLNYLSSHDNTSHVQNYYNKHHASCSGLYRDYVDLVSEDNVFSGSEEEQLNRALEESLKESSHAAVHVEDILQSLRVGINEEVIRFNLNRRNEWDCAVRAMRRPNFSTNKRVDVKFTDDAGVSEGAVDLGGPMREFFRLVLQHIRNSPMFDGPENQRTLSCHVESLKNNSYFYAGQLIAMSIVHGGPSPHFFAPVLFQPVALGPDNVHAAIEDITDPDIKCQLSEVGV
SIO_010081: LOC117398614
subclass of: SO_0000673
so part of: LOC117398614
location: complement(join(1243251..1243444,1243864..1244156,1244608..1244718,1244989..1245101))
location: region:1243251-1245101:-1
so has part: feature:1244989-1245101:-1:exon
so has part: feature:1244608-1244718:-1:exon
so has part: feature:1243864-1244156:-1:exon
so has part: feature:1243251-1243444:-1:exon

XP_034769264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1244989-1245101:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1244608-1244718:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1243864-1244156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1243251-1243444:-1:exon

LOC117407842
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117407842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1260428..1265254
location: region:1260428-1265254:1
so has part: feature:1260428-1265254:1:exon
subclass of: SO_0000010

117407842
type: Gene
SIO_000068: ncbigene

position:1260428:1
position: 1260428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1265254:1
position: 1265254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1260428-1265254:1:exon

LOC117407842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117407842
product: uncharacterized LOC117407842, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034913517.1
SIO_010081: LOC117407842
subclass of: SO_0000673
so part of: LOC117407842
location: join(1260428..1260649,1261115..1261245,1261391..1261527,1261712..1261805,1262182..1262514,1262605..1262772,1263326..1265254)
location: region:1260428-1265254:1
so has part: feature:1260428-1260649:1:exon
so has part: feature:1261115-1261245:1:exon
so has part: feature:1261391-1261527:1:exon
so has part: feature:1261712-1261805:1:exon
so has part: feature:1262182-1262514:1:exon
so has part: feature:1262605-1262772:1:exon
so has part: feature:1263326-1265254:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1260428-1260649:1:exon

position:1260649:1
position: 1260649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1261115-1261245:1:exon

position:1261115:1
position: 1261115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261245:1
position: 1261245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1261391-1261527:1:exon

position:1261391:1
position: 1261391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261527:1
position: 1261527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1261712-1261805:1:exon

position:1261712:1
position: 1261712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261805:1
position: 1261805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1262182-1262514:1:exon

position:1262182:1
position: 1262182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262514:1
position: 1262514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1262605-1262772:1:exon

position:1262605:1
position: 1262605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262772:1
position: 1262772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1263326-1265254:1:exon

position:1263326:1
position: 1263326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117407842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117407842
product: uncharacterized LOC117407842, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034913518.1
SIO_010081: LOC117407842
subclass of: SO_0000673
so part of: LOC117407842
location: join(1260428..1260649,1261115..1261245,1261391..1261527,1261712..1261805,1262182..1262514,1262605..1262772,1262908..1263032,1263326..1263466)
location: region:1260428-1263466:1
so has part: feature:1260428-1260649:1:exon
so has part: feature:1261115-1261245:1:exon
so has part: feature:1261391-1261527:1:exon
so has part: feature:1261712-1261805:1:exon
so has part: feature:1262182-1262514:1:exon
so has part: feature:1262605-1262772:1:exon
so has part: feature:1262908-1263032:1:exon
so has part: feature:1263326-1263466:1:exon

position:1263466:1
position: 1263466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1260428-1260649:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1261115-1261245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1261391-1261527:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1261712-1261805:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1262182-1262514:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1262605-1262772:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1262908-1263032:1:exon

position:1262908:1
position: 1262908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263032:1
position: 1263032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1263326-1263466:1:exon

LOC117407842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117407842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117407842 isoform X1
translation: MTSSEVSFKVFTGEQSDLSEASFCSVGSDSSSGSTVILEETIARRRNRTDSPVDSNAAGDMISAILDSKAGGEKIFLEFAKTKSLSDSTRRLLVNMLVADMIEKHGRVPPSSVRTKHALGIVTLFPYLKDPDSSNGYEHYCDAESGSGYLAWRIKTVQRNTSHGTKKRSMSTYQDGPKAKRASHSTVEQLTGDECREAISVLQHSTDESLVKEKMRATFKHRQNIVQDPEKSSTILGVFPRFLDIPGLIDQDFTMLFGEDASGKFLAKWPTLFRPGSSQTARTYPPVPIWKPSSLLRSTTLMIWVGTSMVTFLAQVGREQPFLLCVGEQKNIIQKFYIVVDQKAIPCKTQTSVTAFDELFKAHYVFGVSCDEALGSFYTFIQTTVYNIDVGNAKESPRVKEIRARLLNRDT
SIO_010081: LOC117407842
subclass of: SO_0000673
so part of: LOC117407842
location: join(1260601..1260649,1261115..1261245,1261391..1261527,1261712..1261805,1262182..1262514,1262605..1262772,1263326..1263649)
location: region:1260601-1263649:1
so has part: feature:1260601-1260649:1:exon
so has part: feature:1261115-1261245:1:exon
so has part: feature:1261391-1261527:1:exon
so has part: feature:1261712-1261805:1:exon
so has part: feature:1262182-1262514:1:exon
so has part: feature:1262605-1262772:1:exon
so has part: feature:1263326-1263649:1:exon

XP_034769408.1
type: Protein
SIO_000068: ncbiprotein

position:1260601:1
position: 1260601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263649:1
position: 1263649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1260601-1260649:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1261115-1261245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1261391-1261527:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1261712-1261805:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1262182-1262514:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1262605-1262772:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1263326-1263649:1:exon

LOC117407842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117407842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117407842 isoform X2
translation: MTSSEVSFKVFTGEQSDLSEASFCSVGSDSSSGSTVILEETIARRRNRTDSPVDSNAAGDMISAILDSKAGGEKIFLEFAKTKSLSDSTRRLLVNMLVADMIEKHGRVPPSSVRTKHALGIVTLFPYLKDPDSSNGYEHYCDAESGSGYLAWRIKTVQRNTSHGTKKRSMSTYQDGPKAKRASHSTVEQLTGDECREAISVLQHSTDESLVKEKMRATFKHRQNIVQDPEKSSTILGVFPRFLDIPGLIDQDFTMLFGEDASGKFLAKWPTLFRPGSSQTARTYPPVPIWKPSSLLRSTTLMIWDGTVTWQPFCCCCICYPRPQKARGLQRSLSLKLLTIW
SIO_010081: LOC117407842
subclass of: SO_0000673
so part of: LOC117407842
location: join(1260601..1260649,1261115..1261245,1261391..1261527,1261712..1261805,1262182..1262514,1262605..1262772,1262908..1263021)
location: region:1260601-1263021:1
so has part: feature:1260601-1260649:1:exon
so has part: feature:1261115-1261245:1:exon
so has part: feature:1261391-1261527:1:exon
so has part: feature:1261712-1261805:1:exon
so has part: feature:1262182-1262514:1:exon
so has part: feature:1262605-1262772:1:exon
so has part: feature:1262908-1263021:1:exon

XP_034769409.1
type: Protein
SIO_000068: ncbiprotein

position:1263021:1
position: 1263021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1260601-1260649:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1261115-1261245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1261391-1261527:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1261712-1261805:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1262182-1262514:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1262605-1262772:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1262908-1263021:1:exon

LOC117404758
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1289561..1293921)
location: region:1289561-1293921:-1
so has part: feature:1289561-1293921:-1:exon
subclass of: SO_0000010

117404758
type: Gene
SIO_000068: ncbigene

position:1289561:-1
position: 1289561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293921:-1
position: 1293921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1289561-1293921:-1:exon

LOC117404758
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404758
product: uncharacterized LOC117404758, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913519.1
SIO_010081: LOC117404758
subclass of: SO_0000673
so part of: LOC117404758
location: complement(join(1289561..1290066,1290620..1290787,1290878..1291210,1291586..1291679,1291859..1291980,1292126..1292256,1292722..1293921))
location: region:1289561-1293921:-1
so has part: feature:1292722-1293921:-1:exon
so has part: feature:1292126-1292256:-1:exon
so has part: feature:1291859-1291980:-1:exon
so has part: feature:1291586-1291679:-1:exon
so has part: feature:1290878-1291210:-1:exon
so has part: feature:1290620-1290787:-1:exon
so has part: feature:1289561-1290066:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1292722-1293921:-1:exon

position:1292722:-1
position: 1292722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1292126-1292256:-1:exon

position:1292126:-1
position: 1292126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292256:-1
position: 1292256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1291859-1291980:-1:exon

position:1291859:-1
position: 1291859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291980:-1
position: 1291980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1291586-1291679:-1:exon

position:1291586:-1
position: 1291586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291679:-1
position: 1291679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1290878-1291210:-1:exon

position:1290878:-1
position: 1290878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291210:-1
position: 1291210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1290620-1290787:-1:exon

position:1290620:-1
position: 1290620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290787:-1
position: 1290787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1289561-1290066:-1:exon

position:1290066:-1
position: 1290066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117404758
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117404758 isoform X1
translation: MTSSEVSFKVFTGEQSDLSEASFCSMGSDSSSGSTVILEKTIARRRNRTDSPVDSNAAGDMISAILDSKAGGEFAKTKSLSDSTRRLLVNMLVADMIEKHGRAPPSSVRTKHALGIVTLFPYLKDPDSSNGYEHYCDAESGPGYLAWRIKTVQRNTSHGTKKRSMSTYQDGPKAKRASHSTVEQLTGDKCREAISVLQHSTDESLVKEKMRATFKHRQNIVQDPEKSSTILGLFPRFLDIPGLIDQDFTMLFGEDASGKFLAKWPPLLRPGSSQTARTYPPVPIWKPSSLLRSTTLMIWVGTSMVTFLAQVGREQPFLLCVGEQKNIIQKFYIVVDQKAIPCKTQTSVTAFDELFKAHYVFGVSYDKALGSFYTFIQTTEYNIDVGNAKESPRVKEIRARLLNRDT
SIO_010081: LOC117404758
subclass of: SO_0000673
so part of: LOC117404758
location: complement(join(1289743..1290066,1290620..1290787,1290878..1291210,1291586..1291679,1291859..1291980,1292126..1292256,1292722..1292770))
location: region:1289743-1292770:-1
so has part: feature:1292722-1292770:-1:exon
so has part: feature:1292126-1292256:-1:exon
so has part: feature:1291859-1291980:-1:exon
so has part: feature:1291586-1291679:-1:exon
so has part: feature:1290878-1291210:-1:exon
so has part: feature:1290620-1290787:-1:exon
so has part: feature:1289743-1290066:-1:exon

XP_034769410.1
type: Protein
SIO_000068: ncbiprotein

position:1289743:-1
position: 1289743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292770:-1
position: 1292770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1292722-1292770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1292126-1292256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291859-1291980:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1291586-1291679:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290878-1291210:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1290620-1290787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1289743-1290066:-1:exon

LOC117404758
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404758
product: uncharacterized LOC117404758, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034913520.1
SIO_010081: LOC117404758
subclass of: SO_0000673
so part of: LOC117404758
location: complement(join(1289925..1290066,1290360..1290484,1290620..1290787,1290878..1291210,1291586..1291679,1291859..1291980,1292126..1292256,1292722..1293921))
location: region:1289925-1293921:-1
so has part: feature:1292722-1293921:-1:exon
so has part: feature:1292126-1292256:-1:exon
so has part: feature:1291859-1291980:-1:exon
so has part: feature:1291586-1291679:-1:exon
so has part: feature:1290878-1291210:-1:exon
so has part: feature:1290620-1290787:-1:exon
so has part: feature:1290360-1290484:-1:exon
so has part: feature:1289925-1290066:-1:exon

position:1289925:-1
position: 1289925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1292722-1293921:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1292126-1292256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291859-1291980:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1291586-1291679:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290878-1291210:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1290620-1290787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290360-1290484:-1:exon

position:1290360:-1
position: 1290360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290484:-1
position: 1290484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1289925-1290066:-1:exon

LOC117404758
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117404758 isoform X2
translation: MTSSEVSFKVFTGEQSDLSEASFCSMGSDSSSGSTVILEKTIARRRNRTDSPVDSNAAGDMISAILDSKAGGEFAKTKSLSDSTRRLLVNMLVADMIEKHGRAPPSSVRTKHALGIVTLFPYLKDPDSSNGYEHYCDAESGPGYLAWRIKTVQRNTSHGTKKRSMSTYQDGPKAKRASHSTVEQLTGDKCREAISVLQHSTDESLVKEKMRATFKHRQNIVQDPEKSSTILGLFPRFLDIPGLIDQDFTMLFGEDASGKFLAKWPPLLRPGSSQTARTYPPVPIWKPSSLLRSTTLMIWDGTVTWQPFCCCCICYPRPQKARGLQRSVSLKLLTIW
SIO_010081: LOC117404758
subclass of: SO_0000673
so part of: LOC117404758
location: complement(join(1290371..1290484,1290620..1290787,1290878..1291210,1291586..1291679,1291859..1291980,1292126..1292256,1292722..1292770))
location: region:1290371-1292770:-1
so has part: feature:1292722-1292770:-1:exon
so has part: feature:1292126-1292256:-1:exon
so has part: feature:1291859-1291980:-1:exon
so has part: feature:1291586-1291679:-1:exon
so has part: feature:1290878-1291210:-1:exon
so has part: feature:1290620-1290787:-1:exon
so has part: feature:1290371-1290484:-1:exon

XP_034769411.1
type: Protein
SIO_000068: ncbiprotein

position:1290371:-1
position: 1290371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1292722-1292770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1292126-1292256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291859-1291980:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1291586-1291679:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290878-1291210:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1290620-1290787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290371-1290484:-1:exon

LOC117400210
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117400210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1335120..1339598)
location: region:1335120-1339598:-1
so has part: feature:1335120-1339598:-1:exon
subclass of: SO_0000010

117400210
type: Gene
SIO_000068: ncbigene

position:1335120:-1
position: 1335120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1339598:-1
position: 1339598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1335120-1339598:-1:exon

LOC117400210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117400210
product: TBC1 domain family member 2A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034913522.1
SIO_010081: LOC117400210
subclass of: SO_0000673
so part of: LOC117400210
location: complement(join(1335120..1336251,1336939..1337046,1338523..1338916,1339455..1339598))
location: region:1335120-1339598:-1
so has part: feature:1339455-1339598:-1:exon
so has part: feature:1338523-1338916:-1:exon
so has part: feature:1336939-1337046:-1:exon
so has part: feature:1335120-1336251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1339455-1339598:-1:exon

position:1339455:-1
position: 1339455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1338523-1338916:-1:exon

position:1338523:-1
position: 1338523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338916:-1
position: 1338916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1336939-1337046:-1:exon

position:1336939:-1
position: 1336939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1337046:-1
position: 1337046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1335120-1336251:-1:exon

position:1336251:-1
position: 1336251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117400210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117400210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 2A-like
translation: MQDCQVNELELQQHVQLMMEKNNAKQEVILKLSEQVAACMADPQRTVANSMGTETFCRLHEKIEHLKDDIEAHKIQNKFLNSEIYQLTKLWRNSSEEKGLLMKTPLSRATYNCYTWRG
SIO_010081: LOC117400210
subclass of: SO_0000673
so part of: LOC117400210
location: complement(join(1336204..1336251,1336939..1337046,1338523..1338723))
location: region:1336204-1338723:-1
so has part: feature:1338523-1338723:-1:exon
so has part: feature:1336939-1337046:-1:exon
so has part: feature:1336204-1336251:-1:exon

XP_034769413.1
type: Protein
SIO_000068: ncbiprotein

position:1336204:-1
position: 1336204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338723:-1
position: 1338723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1338523-1338723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1336939-1337046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1336204-1336251:-1:exon

LOC117407822
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117407822
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1377206..1381911
location: region:1377206-1381911:1
so has part: feature:1377206-1381911:1:exon
subclass of: SO_0000010

117407822
type: Gene
SIO_000068: ncbigene

position:1377206:1
position: 1377206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1381911:1
position: 1381911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1377206-1381911:1:exon

LOC117407822
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117407822
product: cystatin-B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034013085.2
SIO_010081: LOC117407822
subclass of: SO_0000673
so part of: LOC117407822
location: join(1377206..1377322,1381314..1381415,1381635..1381911)
location: region:1377206-1381911:1
so has part: feature:1377206-1377322:1:exon
so has part: feature:1381314-1381415:1:exon
so has part: feature:1381635-1381911:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1377206-1377322:1:exon

position:1377322:1
position: 1377322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1381314-1381415:1:exon

position:1381314:1
position: 1381314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1381415:1
position: 1381415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1381635-1381911:1:exon

position:1381635:1
position: 1381635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117407822
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117407822
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cystatin-B-like
translation: MSGMCGGFSETKPATEEEQLICNVVRNEAQVRAGKNFDEFTAKKSRTQVVAGTNFLIKVRVGGEEYVHLLVFQPLPYEKKPPVLTGIQTSKHQDEELVPF
SIO_010081: LOC117407822
subclass of: SO_0000673
so part of: LOC117407822
location: join(1377251..1377322,1381314..1381415,1381635..1381763)
location: region:1377251-1381763:1
so has part: feature:1377251-1377322:1:exon
so has part: feature:1381314-1381415:1:exon
so has part: feature:1381635-1381763:1:exon

XP_033868976.1
type: Protein
SIO_000068: ncbiprotein

position:1377251:1
position: 1377251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1381763:1
position: 1381763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1377251-1377322:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1381314-1381415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1381635-1381763:1:exon

LOC117966731
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966731
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1492787..1514305)
location: region:1492787-1514305:-1
so has part: feature:1492787-1514305:-1:exon
subclass of: SO_0000010

117966731
type: Gene
SIO_000068: ncbigene

position:1492787:-1
position: 1492787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514305:-1
position: 1514305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1492787-1514305:-1:exon

LOC117966731
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966731
product: myocardin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034913374.1
SIO_010081: LOC117966731
subclass of: SO_0000673
so part of: LOC117966731
location: complement(join(1492787..1493003,1495376..1495686,1497072..1497391,1501260..1501326,1504069..1504130,1505397..1505453,1513513..1514305))
location: region:1492787-1514305:-1
so has part: feature:1513513-1514305:-1:exon
so has part: feature:1505397-1505453:-1:exon
so has part: feature:1504069-1504130:-1:exon
so has part: feature:1501260-1501326:-1:exon
so has part: feature:1497072-1497391:-1:exon
so has part: feature:1495376-1495686:-1:exon
so has part: feature:1492787-1493003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1513513-1514305:-1:exon

position:1513513:-1
position: 1513513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1505397-1505453:-1:exon

position:1505397:-1
position: 1505397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1505453:-1
position: 1505453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1504069-1504130:-1:exon

position:1504069:-1
position: 1504069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1504130:-1
position: 1504130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1501260-1501326:-1:exon

position:1501260:-1
position: 1501260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1501326:-1
position: 1501326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1497072-1497391:-1:exon

position:1497072:-1
position: 1497072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1497391:-1
position: 1497391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1495376-1495686:-1:exon

position:1495376:-1
position: 1495376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1495686:-1
position: 1495686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1492787-1493003:-1:exon

position:1493003:-1
position: 1493003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117966731
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966731
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocardin-like
translation: MTLLASERSILIRNKFRSVLQLRMQHRRQQNEASSDTALSNGSLGVRGERETERERGKAPDDFLKHKTPQRLPGPDPDSRVCLHLPQSSSDSFDDDISSSSASTSPDQSQGLSVSPGRPADHPRSSSCPGPAPCPSASNHSSASSLSATESSAQPITASLSESDSMATAGRANGMFLSVPPTPLLPKAPSPPSSLLRPPRSKKSKDSKPKLRKLKYHQYIPPDQKGGAGGGAMGGTQGHAPSAMDSAYSRLLQQQQVFLQLQILSQQTLDQDQSQSQGAGSASTEQGISSSSEQILSITGATPTVCPRPLPLAPGHAPSASGSASKPEPLPSNLDDLTVSKGESRNRSEGRGEERKEERGVT
SIO_010081: LOC117966731
subclass of: SO_0000673
so part of: LOC117966731
location: complement(join(1492787..1493003,1495376..1495686,1497072..1497391,1501260..1501326,1504069..1504130,1505397..1505453,1513513..1513567))
location: region:1492787-1513567:-1
so has part: feature:1513513-1513567:-1:exon
so has part: feature:1505397-1505453:-1:exon
so has part: feature:1504069-1504130:-1:exon
so has part: feature:1501260-1501326:-1:exon
so has part: feature:1497072-1497391:-1:exon
so has part: feature:1495376-1495686:-1:exon
so has part: feature:1492787-1493003:-1:exon

XP_034769265.1
type: Protein
SIO_000068: ncbiprotein

position:1513567:-1
position: 1513567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1513513-1513567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1505397-1505453:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1504069-1504130:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1501260-1501326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1497072-1497391:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1495376-1495686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1492787-1493003:-1:exon

ube2s
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: ube2s
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1525800..1537694
location: region:1525800-1537694:1
so has part: feature:1525800-1537694:1:exon
subclass of: SO_0000010

117410185
type: Gene
SIO_000068: ncbigene

position:1525800:1
position: 1525800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1537694:1
position: 1537694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1525800-1537694:1:exon

ube2s
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: ube2s
product: ubiquitin-conjugating enzyme E2S
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034016641.2
SIO_010081: ube2s
subclass of: SO_0000673
so part of: ube2s
location: join(1525800..1526005,1528973..1529120,1533937..1534127,1536773..1537694)
location: region:1525800-1537694:1
so has part: feature:1525800-1526005:1:exon
so has part: feature:1528973-1529120:1:exon
so has part: feature:1533937-1534127:1:exon
so has part: feature:1536773-1537694:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1525800-1526005:1:exon

position:1526005:1
position: 1526005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1528973-1529120:1:exon

position:1528973:1
position: 1528973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529120:1
position: 1529120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1533937-1534127:1:exon

position:1533937:1
position: 1533937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1534127:1
position: 1534127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1536773-1537694:1:exon

position:1536773:1
position: 1536773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ube2s
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: ube2s
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 S
translation: MNSNVENLPPHVIRLVYKEVSSLAADPPEGVKIYPNEEDLSDLHASIEGPEGTPFAGGVFRMRLVLGKDFPASPPKGYFLTKIFHPNVGPSGEICVNVLKRDWRAELGIRHILLTIRCLLIHPNPESALNPEAGRLLLEGYPAFASRARLLTEIHAIGGAEGGGPPQPKKHAGERGSRGVGGGGSGKKKGGEKKRALRRL
SIO_010081: ube2s
subclass of: SO_0000673
so part of: ube2s
location: join(1526003..1526005,1528973..1529120,1533937..1534127,1536773..1537033)
location: region:1526003-1537033:1
so has part: feature:1526003-1526005:1:exon
so has part: feature:1528973-1529120:1:exon
so has part: feature:1533937-1534127:1:exon
so has part: feature:1536773-1537033:1:exon

XP_033872532.1
type: Protein
SIO_000068: ncbiprotein

position:1526003:1
position: 1526003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1537033:1
position: 1537033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1526003-1526005:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1528973-1529120:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1533937-1534127:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1536773-1537033:1:exon

LOC117410081
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410081
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1581870..1584552)
location: region:1581870-1584552:-1
so has part: feature:1581870-1584552:-1:exon
subclass of: SO_0000010

117410081
type: Gene
SIO_000068: ncbigene

position:1581870:-1
position: 1581870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1584552:-1
position: 1584552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1581870-1584552:-1:exon

LOC117410081
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410081
product: uncharacterized LOC117410081
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 77% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034913324.1
SIO_010081: LOC117410081
subclass of: SO_0000673
so part of: LOC117410081
location: complement(join(1581870..1582394,1584074..1584552))
location: region:1581870-1584552:-1
so has part: feature:1584074-1584552:-1:exon
so has part: feature:1581870-1582394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1584074-1584552:-1:exon

position:1584074:-1
position: 1584074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1581870-1582394:-1:exon

position:1582394:-1
position: 1582394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117410081
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410081
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: uncharacterized protein LOC117410081
translation: MRPRLSMTPNPYPAPQPGYEPLDSKPPRRVMSQDQLLVFGEGTQLNPLNNPQSTLSNRSGTLGHHQKNQPLQPLHLYQLQQHQQERAASAQYQKHSNPGPYPPQTLVRLRSPDRGTLPRLSPAQKAQSQQNVCATPSLDRHHMIKMNSHPTAGRERGEGPGQGGGAGALGXTLGGGAGGGTLGGHSARRMAFAAKRQNTIEQLHFIPGGGNQGGGNGGGQQLRTGSKNEVTV
SIO_010081: LOC117410081
subclass of: SO_0000673
so part of: LOC117410081
location: complement(join(1581870..1582394,1584074..1584246))
location: region:1581870-1584246:-1
so has part: feature:1584074-1584246:-1:exon
so has part: feature:1581870-1582394:-1:exon

XP_034769215.1
type: Protein
SIO_000068: ncbiprotein

position:1584246:-1
position: 1584246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1584074-1584246:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1581870-1582394:-1:exon

LOC117966732
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966732
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1660310..1709055)
location: region:1660310-1709055:-1
so has part: feature:1660310-1709055:-1:exon
subclass of: SO_0000010

117966732
type: Gene
SIO_000068: ncbigene

position:1660310:-1
position: 1660310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1709055:-1
position: 1709055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1660310-1709055:-1:exon

LOC117966732
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966732
product: C-Jun-amino-terminal kinase-interacting protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913375.1
SIO_010081: LOC117966732
subclass of: SO_0000673
so part of: LOC117966732
location: complement(join(1660310..1660465,1679678..1679837,1680484..1680651,1680795..1680848,1681297..1681427,1682659..1682701,1688483..1688635,1692860..1692917,1693180..1693295,1693402..1693649,1699507..1699579,1699882..1699940,1702174..1702244,1702440..1702560,1708172..1708366,1708906..1709055))
location: region:1660310-1709055:-1
so has part: feature:1708906-1709055:-1:exon
so has part: feature:1708172-1708366:-1:exon
so has part: feature:1702440-1702560:-1:exon
so has part: feature:1702174-1702244:-1:exon
so has part: feature:1699882-1699940:-1:exon
so has part: feature:1699507-1699579:-1:exon
so has part: feature:1693402-1693649:-1:exon
so has part: feature:1693180-1693295:-1:exon
so has part: feature:1692860-1692917:-1:exon
so has part: feature:1688483-1688635:-1:exon
so has part: feature:1682659-1682701:-1:exon
so has part: feature:1681297-1681427:-1:exon
so has part: feature:1680795-1680848:-1:exon
so has part: feature:1680484-1680651:-1:exon
so has part: feature:1679678-1679837:-1:exon
so has part: feature:1660310-1660465:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1708906-1709055:-1:exon

position:1708906:-1
position: 1708906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1708172-1708366:-1:exon

position:1708172:-1
position: 1708172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1708366:-1
position: 1708366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1702440-1702560:-1:exon

position:1702440:-1
position: 1702440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1702560:-1
position: 1702560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1702174-1702244:-1:exon

position:1702174:-1
position: 1702174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1702244:-1
position: 1702244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1699882-1699940:-1:exon

position:1699882:-1
position: 1699882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1699940:-1
position: 1699940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1699507-1699579:-1:exon

position:1699507:-1
position: 1699507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1699579:-1
position: 1699579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1693402-1693649:-1:exon

position:1693402:-1
position: 1693402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1693649:-1
position: 1693649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1693180-1693295:-1:exon

position:1693180:-1
position: 1693180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1693295:-1
position: 1693295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1692860-1692917:-1:exon

position:1692860:-1
position: 1692860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1692917:-1
position: 1692917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1688483-1688635:-1:exon

position:1688483:-1
position: 1688483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1688635:-1
position: 1688635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1682659-1682701:-1:exon

position:1682659:-1
position: 1682659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1682701:-1
position: 1682701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1681297-1681427:-1:exon

position:1681297:-1
position: 1681297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1681427:-1
position: 1681427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1680795-1680848:-1:exon

position:1680795:-1
position: 1680795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1680848:-1
position: 1680848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1680484-1680651:-1:exon

position:1680484:-1
position: 1680484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1680651:-1
position: 1680651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1679678-1679837:-1:exon

position:1679678:-1
position: 1679678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1679837:-1
position: 1679837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1660310-1660465:-1:exon

position:1660465:-1
position: 1660465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117966732
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966732
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-Jun-amino-terminal kinase-interacting protein 3-like
translation: MDLDGLVLDPDPEAVSEEAGQLYAHLQVLIDSHGPGCVEGLLPVLVSLLESLAQSRTRLSERENESEREREERETLLEQFERERSRRRETEERFLELDDALEQERRALQGKVRAAETRSRDMERKAREYADQMAALEEQRANQSRELSALRHTHTKLLRSYKEMLDQTAASSNPPRAQKRSLGSEVEADQGYPKSISTPQAGLFEEEKLIDKEEERQEVKEPSPVDDIINATPELAHMDDINSTPELAHVDDIISSTPELAHVDDIINSTPELTHVDDIMTTSSPLPQGGAALRNTDSVFTELSGISTSDIDDVDMGASLHVMGGQFESLISDNEELKRDNLVLDAARRALISRVEELTNERATLGLEAESLRDTATRLEGRLRDSEEEVRRLRQELEEAQKSDPESSLPPSLRRRFSRLEMARVVMERNQFKERLIELQEALRRTQDMRATKEERNVEEKRSSVWRKFHRLFGLTKDPLAPSPVASHRQTPPPVASHRQTPPLTVGEPKDLNRLYAANRNTRDSGSVDSSDVPPPLCLSPRDRKCELYREIRSHVWSMLGKQQVHGWSLPPTTDTQSRVFSRACHCQSSTVSKPGQDQSEGLPEESRSQGNRYCFTLSNTALEHSTS
SIO_010081: LOC117966732
subclass of: SO_0000673
so part of: LOC117966732
location: complement(join(1660310..1660465,1679678..1679837,1680484..1680651,1680795..1680848,1681297..1681427,1682659..1682701,1688483..1688635,1692860..1692917,1693180..1693295,1693402..1693649,1699507..1699579,1699882..1699940,1702174..1702244,1702440..1702560,1708172..1708366,1708906..1708986))
location: region:1660310-1708986:-1
so has part: feature:1708906-1708986:-1:exon
so has part: feature:1708172-1708366:-1:exon
so has part: feature:1702440-1702560:-1:exon
so has part: feature:1702174-1702244:-1:exon
so has part: feature:1699882-1699940:-1:exon
so has part: feature:1699507-1699579:-1:exon
so has part: feature:1693402-1693649:-1:exon
so has part: feature:1693180-1693295:-1:exon
so has part: feature:1692860-1692917:-1:exon
so has part: feature:1688483-1688635:-1:exon
so has part: feature:1682659-1682701:-1:exon
so has part: feature:1681297-1681427:-1:exon
so has part: feature:1680795-1680848:-1:exon
so has part: feature:1680484-1680651:-1:exon
so has part: feature:1679678-1679837:-1:exon
so has part: feature:1660310-1660465:-1:exon

XP_034769266.1
type: Protein
SIO_000068: ncbiprotein

position:1708986:-1
position: 1708986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1708906-1708986:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1708172-1708366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1702440-1702560:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1702174-1702244:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1699882-1699940:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1699507-1699579:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1693402-1693649:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1693180-1693295:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1692860-1692917:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1688483-1688635:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1682659-1682701:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1681297-1681427:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1680795-1680848:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1680484-1680651:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1679678-1679837:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1660310-1660465:-1:exon

LOC117966733
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1724552..>1725639)
location: region:1724552-1725639:-1
so has part: feature:1724552-1725639:-1:exon
subclass of: SO_0000010

117966733
type: Gene
SIO_000068: ncbigene

position:1724552:-1
position: 1724552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1725639:-1
position: 1725639
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1724552-1725639:-1:exon

LOC117966733
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966733
product: early nodulin-75-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_034913376.1
SIO_010081: LOC117966733
subclass of: SO_0000673
so part of: LOC117966733
location: complement(join(1724552..1724656,1724992..1725354,1725559..>1725639))
location: region:1724552-1725639:-1
so has part: feature:1725559-1725639:-1:exon
so has part: feature:1724992-1725354:-1:exon
so has part: feature:1724552-1724656:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1725559-1725639:-1:exon

position:1725559:-1
position: 1725559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1724992-1725354:-1:exon

position:1724992:-1
position: 1724992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1725354:-1
position: 1725354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1724552-1724656:-1:exon

position:1724656:-1
position: 1724656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117966733
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: early nodulin-75-like
translation: ENPHQESPIKENPHQEAPIKENPHQEAEAPIKENPNQEAPIKENPHQEAPIKENPHQEAPIKENPHQEAPIKENPHQEAPIKENPHQEAPIKENPHQEAPIKENPHQEAPIKENPHQEAPIKENPHQETPIKEIPHQEAPIRENPHQEMRRQTKELLLDVTLQQQQLLMMHSLCQSLWISVS
SIO_010081: LOC117966733
subclass of: SO_0000673
so part of: LOC117966733
location: complement(join(1724552..1724656,1724992..1725354,1725559..>1725639))
location: region:1724552-1725639:-1
so has part: feature:1725559-1725639:-1:exon
so has part: feature:1724992-1725354:-1:exon
so has part: feature:1724552-1724656:-1:exon

XP_034769267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1725559-1725639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1724992-1725354:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1724552-1724656:-1:exon

LOC117966734
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966734
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1732088..1747197)
location: region:1732088-1747197:-1
so has part: feature:1732088-1747197:-1:exon
subclass of: SO_0000010

117966734
type: Gene
SIO_000068: ncbigene

position:1732088:-1
position: 1732088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747197:-1
position: 1747197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1732088-1747197:-1:exon

LOC117966734
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966734
product: interleukin-11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034913378.1
SIO_010081: LOC117966734
subclass of: SO_0000673
so part of: LOC117966734
location: complement(join(1732088..1732255,1735179..1735340,1735929..1736015,1741656..1741810,1747073..1747197))
location: region:1732088-1747197:-1
so has part: feature:1747073-1747197:-1:exon
so has part: feature:1741656-1741810:-1:exon
so has part: feature:1735929-1736015:-1:exon
so has part: feature:1735179-1735340:-1:exon
so has part: feature:1732088-1732255:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1747073-1747197:-1:exon

position:1747073:-1
position: 1747073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1741656-1741810:-1:exon

position:1741656:-1
position: 1741656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1741810:-1
position: 1741810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1735929-1736015:-1:exon

position:1735929:-1
position: 1735929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1736015:-1
position: 1736015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1735179-1735340:-1:exon

position:1735179:-1
position: 1735179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1735340:-1
position: 1735340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1732088-1732255:-1:exon

position:1732255:-1
position: 1732255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117966734
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966734
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-11-like
translation: MNNFSAQILLALFSLFCDITSVVSAPHRYRGDFKSLVNQAQTLLTESKHLLNHMKSHSDADGDHKLDSLPVLSVSATNLSTAQVKSTLSKLLSDLFSYEKHFDWLRRVSERPHHGHLPKVVGVLTHIRNMIASLQHQMIQLNVPRPPPPSPSLPPPHPPVWEAVQTAHAILKSFRLFSDWSVRALLSLSDRL
SIO_010081: LOC117966734
subclass of: SO_0000673
so part of: LOC117966734
location: complement(join(1732088..1732255,1735179..1735340,1735929..1736015,1741656..1741810,1747073..1747079))
location: region:1732088-1747079:-1
so has part: feature:1747073-1747079:-1:exon
so has part: feature:1741656-1741810:-1:exon
so has part: feature:1735929-1736015:-1:exon
so has part: feature:1735179-1735340:-1:exon
so has part: feature:1732088-1732255:-1:exon

XP_034769269.1
type: Protein
SIO_000068: ncbiprotein

position:1747079:-1
position: 1747079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1747073-1747079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1741656-1741810:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1735929-1736015:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1735179-1735340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1732088-1732255:-1:exon

LOC117966719
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966719
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1826577..1829817
location: region:1826577-1829817:1
so has part: feature:1826577-1829817:1:exon
subclass of: SO_0000010

117966719
type: Gene
SIO_000068: ncbigene

position:1826577:1
position: 1826577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1829817:1
position: 1829817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1826577-1829817:1:exon

LOC117966719
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966719
product: carnosine synthase 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913347.1
SIO_010081: LOC117966719
subclass of: SO_0000673
so part of: LOC117966719
location: join(1826577..1826653,1826940..1827171,1827502..1827740,1828213..1828490,1828872..1829817)
location: region:1826577-1829817:1
so has part: feature:1826577-1826653:1:exon
so has part: feature:1826940-1827171:1:exon
so has part: feature:1827502-1827740:1:exon
so has part: feature:1828213-1828490:1:exon
so has part: feature:1828872-1829817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1826577-1826653:1:exon

position:1826653:1
position: 1826653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1826940-1827171:1:exon

position:1826940:1
position: 1826940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1827171:1
position: 1827171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1827502-1827740:1:exon

position:1827502:1
position: 1827502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1827740:1
position: 1827740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1828213-1828490:1:exon

position:1828213:1
position: 1828213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1828490:1
position: 1828490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1828872-1829817:1:exon

position:1828872:1
position: 1828872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117966719
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966719
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carnosine synthase 1-like
translation: MCAVVTRSPEGLPLLNQLVCSVGRSDSPIRHGSSPLQSLETTLQDWGLSDSAQCSSIHSQVKSTAETCLRVAMEMEAGLSPEQRGGRAAQTDMIGVDMLLSCSGQVVTPFCLGLKPSRCLESCGLFLSGGGALLHTPLNRSQRYIMEGRNLLIIGAGGFCETFVWESARDFGLKIHLVESNPTHFAAGLVTTFIHLDLTDHKRAPENCSRICEVLCERGIHPDGCLTFWDDCVVLVALVCERLGLRSSPTLAVRTARQKSQTHLCLLSRPVWTPSPHIYAVPCYHVESRADLEKAAWLVSFPAVMKLEYGAGAVGSKCVNSAEECQAHLEKISNDIREGTDYAGAGLAWSNAMTLMEYLSGTEHEIDLVLFDGQKVSAFVSDSGPTRVPSFTVTAAAMPSYLRPDKRAQLVEAALRCCLGCGLTDGVFNVEMKMTPTGPRLIEINARMGGYCLRDWIQVVYGADILLAAFMVACGLRPRIPEASPPLCHLIGVMCILPQHFQVLKTTASSEVLRLLHSRGVIHFSQLEDKLILRVYEYPYCNVACQSQDRDAARLQLLSACQILGIDSPDYPVSYFLSDFK
SIO_010081: LOC117966719
subclass of: SO_0000673
so part of: LOC117966719
location: join(1826603..1826653,1826940..1827171,1827502..1827740,1828213..1828490,1828872..1829817)
location: region:1826603-1829817:1
so has part: feature:1826603-1826653:1:exon
so has part: feature:1826940-1827171:1:exon
so has part: feature:1827502-1827740:1:exon
so has part: feature:1828213-1828490:1:exon
so has part: feature:1828872-1829817:1:exon

XP_034769238.1
type: Protein
SIO_000068: ncbiprotein

position:1826603:1
position: 1826603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1826603-1826653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1826940-1827171:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1827502-1827740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1828213-1828490:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1828872-1829817:1:exon

LOC117966709
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1835901..1841850
location: region:1835901-1841850:1
so has part: feature:1835901-1841850:1:exon
subclass of: SO_0000010

117966709
type: Gene
SIO_000068: ncbigene

position:1835901:1
position: 1835901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1841850:1
position: 1841850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1835901-1841850:1:exon

LOC117966709
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966709
product: involucrin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034913331.1
SIO_010081: LOC117966709
subclass of: SO_0000673
so part of: LOC117966709
location: join(1835901..1835992,1840830..1841850)
location: region:1835901-1841850:1
so has part: feature:1835901-1835992:1:exon
so has part: feature:1840830-1841850:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1835901-1835992:1:exon

position:1835992:1
position: 1835992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1840830-1841850:1:exon

position:1840830:1
position: 1840830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117966709
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: involucrin-like
translation: MESVYIKQEEVQELVPVCIKQEMTELDPDHMKEETELEPVHTEEEEQPVHIEEEETELEPVHMKEETELEVVHTEEEEQPVHIEEEETELEPVHIKEETELQPVHTEEKEQPVHIEEEETELEPVHFKEEETQLEPVHIKEEETQLEPVHIKEETQLEPVHIKEEETQLEPVHIKEETELEPVHIKEEETQLEPVHIEEEETELNTEEESIDLFKDSENLSGPKISHQCTDCGKNFSWLGNLKKNTPANSHWREAV
SIO_010081: LOC117966709
subclass of: SO_0000673
so part of: LOC117966709
location: 1840861..1841631
location: region:1840861-1841631:1
so has part: feature:1840861-1841631:1:exon

XP_034769222.1
type: Protein
SIO_000068: ncbiprotein

position:1840861:1
position: 1840861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1841631:1
position: 1841631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1840861-1841631:1:exon

LOC117966788
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966788
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1863399..1870583
location: region:1863399-1870583:1
so has part: feature:1863399-1870583:1:exon
subclass of: SO_0000010

117966788
type: Gene
SIO_000068: ncbigene

position:1863399:1
position: 1863399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1870583:1
position: 1870583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1863399-1870583:1:exon

LOC117966788
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966788
product: E3 ubiquitin-protein ligase TRIM47-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034913465.1
SIO_010081: LOC117966788
subclass of: SO_0000673
so part of: LOC117966788
location: join(1863399..1864275,1866669..1867304,1868973..1869185,1870062..1870583)
location: region:1863399-1870583:1
so has part: feature:1863399-1864275:1:exon
so has part: feature:1866669-1867304:1:exon
so has part: feature:1868973-1869185:1:exon
so has part: feature:1870062-1870583:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1863399-1864275:1:exon

position:1864275:1
position: 1864275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1866669-1867304:1:exon

position:1866669:1
position: 1866669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1867304:1
position: 1867304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1868973-1869185:1:exon

position:1868973:1
position: 1868973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1869185:1
position: 1869185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1870062-1870583:1:exon

position:1870062:1
position: 1870062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117966788
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966788
product: E3 ubiquitin-protein ligase TRIM47-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034913464.1
SIO_010081: LOC117966788
subclass of: SO_0000673
so part of: LOC117966788
location: join(1863399..1864275,1866669..1867304,1868973..1869144,1870062..1870582)
location: region:1863399-1870582:1
so has part: feature:1863399-1864275:1:exon
so has part: feature:1866669-1867304:1:exon
so has part: feature:1868973-1869144:1:exon
so has part: feature:1870062-1870582:1:exon

position:1870582:1
position: 1870582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1863399-1864275:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1866669-1867304:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1868973-1869144:1:exon

position:1869144:1
position: 1869144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1870062-1870582:1:exon

LOC117966788
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7906
gene: LOC117966788
product: E3 ubiquitin-protein ligase TRIM47-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004661787.1
SIO_010081: LOC117966788
so part of: LOC117966788
location: join(1863399..1864275,1866669..1867304,1868973..1869514,1869597..1869783)
location: region:1863399-1869783:1
so has part: feature:1863399-1864275:1:exon
so has part: feature:1866669-1867304:1:exon
so has part: feature:1868973-1869514:1:exon
so has part: feature:1869597-1869783:1:exon

position:1869783:1
position: 1869783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1863399-1864275:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1866669-1867304:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1868973-1869514:1:exon

position:1869514:1
position: 1869514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1869597-1869783:1:exon

position:1869597:1
position: 1869597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117966788
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966788
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM47-like
translation: MAEAITSVSEEQFSCSVCLEIFKDPVTLPCGHSYCMECIDYHWKQPEQRGAISCPQCRHNFSTKPVLRKNFVLADVVERLKQTGLSPSLSAHSLTGTGHVPCDFCTGRKLGAVRSCLTCSASYCPEHLKPHFTVLSFKRHQLVEATGDLIQTLCQQHHRPLEVFCRTDWSFVCLLCAATKHRSHCTVTPEEERASTQAVELHSCVWWKEGVQLAKQAYDTLKAWIPKREASASQLRYIAQQLERMRREANYSRKVRGLAAVGAFVSAVCTAGLGAPLLGAVAGGVAVTTAMTAIWGVAQRVESFKTSDCMKTARKITETDKEAAKKVVRLMKELDKMAERIAASQRCVDSPEPLGKEHVFTRLVSAGLFAGTTLLTARNVNKMAFLMGKLAKNMRAISVPGETAACGPRLVFSVVGLGFDITVLVSAALEQAAKQGNEAAHMLRQAADQSEESLKELKNTLGEIE
SIO_010081: LOC117966788
subclass of: SO_0000673
so part of: LOC117966788
location: join(1863685..1864275,1866669..1867304,1868973..1869143)
location: region:1863685-1869143:1
so has part: feature:1863685-1864275:1:exon
so has part: feature:1866669-1867304:1:exon
so has part: feature:1868973-1869143:1:exon

XP_034769355.1
type: Protein
SIO_000068: ncbiprotein

position:1863685:1
position: 1863685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1869143:1
position: 1869143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1863685-1864275:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1866669-1867304:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1868973-1869143:1:exon

LOC117966788
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966788
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM47-like
translation: MAEAITSVSEEQFSCSVCLEIFKDPVTLPCGHSYCMECIDYHWKQPEQRGAISCPQCRHNFSTKPVLRKNFVLADVVERLKQTGLSPSLSAHSLTGTGHVPCDFCTGRKLGAVRSCLTCSASYCPEHLKPHFTVLSFKRHQLVEATGDLIQTLCQQHHRPLEVFCRTDWSFVCLLCAATKHRSHCTVTPEEERASTQAVELHSCVWWKEGVQLAKQAYDTLKAWIPKREASASQLRYIAQQLERMRREANYSRKVRGLAAVGAFVSAVCTAGLGAPLLGAVAGGVAVTTAMTAIWGVAQRVESFKTSDCMKTARKITETDKEAAKKVVRLMKELDKMAERIAASQRCVDSPEPLGKEHVFTRLVSAGLFAGTTLLTARNVNKMAFLMGKLAKNMRAISVPGETAACGPRLVFSVVGLGFDITVLVSAALEQAAKQGNEAAHMLRQAADQSEESLKELKNTLGEIE
SIO_010081: LOC117966788
subclass of: SO_0000673
so part of: LOC117966788
location: join(1863685..1864275,1866669..1867304,1868973..1869143)
location: region:1863685-1869143:1
so has part: feature:1863685-1864275:1:exon
so has part: feature:1866669-1867304:1:exon
so has part: feature:1868973-1869143:1:exon

XP_034769356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1863685-1864275:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1866669-1867304:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1868973-1869143:1:exon

isoc2
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: isoc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1894150..1910643)
location: region:1894150-1910643:-1
so has part: feature:1894150-1910643:-1:exon
subclass of: SO_0000010

117410187
type: Gene
SIO_000068: ncbigene

position:1894150:-1
position: 1894150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1910643:-1
position: 1910643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1894150-1910643:-1:exon

isoc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: isoc2
product: isochorismatase domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034913480.1
SIO_010081: isoc2
subclass of: SO_0000673
so part of: isoc2
location: complement(join(1894150..1894599,1895918..1896035,1896506..1896576,1906944..1907081,1909840..1909899))
location: region:1894150-1909899:-1
so has part: feature:1909840-1909899:-1:exon
so has part: feature:1906944-1907081:-1:exon
so has part: feature:1896506-1896576:-1:exon
so has part: feature:1895918-1896035:-1:exon
so has part: feature:1894150-1894599:-1:exon

position:1909899:-1
position: 1909899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1909840-1909899:-1:exon

position:1909840:-1
position: 1909840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1906944-1907081:-1:exon

position:1906944:-1
position: 1906944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1907081:-1
position: 1907081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1896506-1896576:-1:exon

position:1896506:-1
position: 1896506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1896576:-1
position: 1896576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1895918-1896035:-1:exon

position:1895918:-1
position: 1895918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1896035:-1
position: 1896035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1894150-1894599:-1:exon

position:1894599:-1
position: 1894599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

isoc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: isoc2
product: isochorismatase domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034913479.1
SIO_010081: isoc2
subclass of: SO_0000673
so part of: isoc2
location: complement(join(1894307..1894599,1895918..1896035,1896506..1896576,1906488..1906709,1906944..1907081,1910244..1910643))
location: region:1894307-1910643:-1
so has part: feature:1910244-1910643:-1:exon
so has part: feature:1906944-1907081:-1:exon
so has part: feature:1906488-1906709:-1:exon
so has part: feature:1896506-1896576:-1:exon
so has part: feature:1895918-1896035:-1:exon
so has part: feature:1894307-1894599:-1:exon

position:1894307:-1
position: 1894307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1910244-1910643:-1:exon

position:1910244:-1
position: 1910244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1906944-1907081:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1906488-1906709:-1:exon

position:1906488:-1
position: 1906488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1906709:-1
position: 1906709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1896506-1896576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1895918-1896035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1894307-1894599:-1:exon

isoc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: isoc2
product: isochorismatase domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034016644.2
SIO_010081: isoc2
subclass of: SO_0000673
so part of: isoc2
location: complement(join(1894307..1894599,1895918..1896035,1896506..1896576,1906488..1906709,1906944..1907081,1909840..1909899))
location: region:1894307-1909899:-1
so has part: feature:1909840-1909899:-1:exon
so has part: feature:1906944-1907081:-1:exon
so has part: feature:1906488-1906709:-1:exon
so has part: feature:1896506-1896576:-1:exon
so has part: feature:1895918-1896035:-1:exon
so has part: feature:1894307-1894599:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1909840-1909899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1906944-1907081:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1906488-1906709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1896506-1896576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1895918-1896035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1894307-1894599:-1:exon

isoc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: isoc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isochorismatase domain-containing protein 2 isoform X2
translation: MSRGRLSPQGTILLLCDLQEKFRPHIVHFGDIVSNAARLLQCTALDLLDKGLEVHLIADAVSSRSQTERLLSLSRLRQSGVFLNTVEGVILQLVQDAAHPKFKQLQKLLTHPSPDTGLLSLF
SIO_010081: isoc2
subclass of: SO_0000673
so part of: isoc2
location: complement(join(1894543..1894599,1895918..1896035,1896506..1896576,1906944..1907066))
location: region:1894543-1907066:-1
so has part: feature:1906944-1907066:-1:exon
so has part: feature:1896506-1896576:-1:exon
so has part: feature:1895918-1896035:-1:exon
so has part: feature:1894543-1894599:-1:exon

XP_034769371.1
type: Protein
SIO_000068: ncbiprotein

position:1894543:-1
position: 1894543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1907066:-1
position: 1907066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1906944-1907066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1896506-1896576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1895918-1896035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1894543-1894599:-1:exon

isoc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: isoc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isochorismatase domain-containing protein 2 isoform X1
translation: MSRGRLSPQGTILLLCDLQEKFRPHIVHFGDIVSNAARLLQASRILGVPAIVSEQYPRGLGPTVPELGAQGVPTFSKTSFSMLTPEIEAALGGGGAGGGARSVLLCGIEAQACITCTALDLLDKGLEVHLIADAVSSRSQTERLLSLSRLRQSGVFLNTVEGVILQLVQDAAHPKFKQLQKLLTHPSPDTGLLSLF
SIO_010081: isoc2
subclass of: SO_0000673
so part of: isoc2
location: complement(join(1894543..1894599,1895918..1896035,1896506..1896576,1906488..1906709,1906944..1907066))
location: region:1894543-1907066:-1
so has part: feature:1906944-1907066:-1:exon
so has part: feature:1906488-1906709:-1:exon
so has part: feature:1896506-1896576:-1:exon
so has part: feature:1895918-1896035:-1:exon
so has part: feature:1894543-1894599:-1:exon

XP_033872535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1906944-1907066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1906488-1906709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1896506-1896576:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1895918-1896035:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1894543-1894599:-1:exon

isoc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: isoc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isochorismatase domain-containing protein 2 isoform X1
translation: MSRGRLSPQGTILLLCDLQEKFRPHIVHFGDIVSNAARLLQASRILGVPAIVSEQYPRGLGPTVPELGAQGVPTFSKTSFSMLTPEIEAALGGGGAGGGARSVLLCGIEAQACITCTALDLLDKGLEVHLIADAVSSRSQTERLLSLSRLRQSGVFLNTVEGVILQLVQDAAHPKFKQLQKLLTHPSPDTGLLSLF
SIO_010081: isoc2
subclass of: SO_0000673
so part of: isoc2
location: complement(join(1894543..1894599,1895918..1896035,1896506..1896576,1906488..1906709,1906944..1907066))
location: region:1894543-1907066:-1
so has part: feature:1906944-1907066:-1:exon
so has part: feature:1906488-1906709:-1:exon
so has part: feature:1896506-1896576:-1:exon
so has part: feature:1895918-1896035:-1:exon
so has part: feature:1894543-1894599:-1:exon

XP_034769370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1906944-1907066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1906488-1906709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1896506-1896576:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1895918-1896035:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1894543-1894599:-1:exon

LOC117966793
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966793
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1910073..1916043
location: region:1910073-1916043:1
so has part: feature:1910073-1916043:1:exon
subclass of: SO_0000010

117966793
type: Gene
SIO_000068: ncbigene

position:1910073:1
position: 1910073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1916043:1
position: 1916043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1910073-1916043:1:exon

LOC117966793
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966793
product: ubiquitin-like protein ATG12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034913482.1
SIO_010081: LOC117966793
subclass of: SO_0000673
so part of: LOC117966793
location: join(1910073..1910227,1911390..1911526,1912372..1912434,1915322..1916043)
location: region:1910073-1916043:1
so has part: feature:1910073-1910227:1:exon
so has part: feature:1911390-1911526:1:exon
so has part: feature:1912372-1912434:1:exon
so has part: feature:1915322-1916043:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1910073-1910227:1:exon

position:1910227:1
position: 1910227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1911390-1911526:1:exon

position:1911390:1
position: 1911390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1911526:1
position: 1911526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1912372-1912434:1:exon

position:1912372:1
position: 1912372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1912434:1
position: 1912434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1915322-1916043:1:exon

position:1915322:1
position: 1915322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117966793
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966793
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-like protein ATG12
translation: MSESADSSAEPSAETATVEETAGSADEKKKIDILLKAVGDAPIMKTKKWSVERSRTVQALGLFIKKFLKLEPAEQLFIYVNQSFAPSPDQEVGTLFECFGSDGKLVLHYCKSQAWG
SIO_010081: LOC117966793
subclass of: SO_0000673
so part of: LOC117966793
location: join(1910137..1910227,1911390..1911526,1912372..1912434,1915322..1915381)
location: region:1910137-1915381:1
so has part: feature:1910137-1910227:1:exon
so has part: feature:1911390-1911526:1:exon
so has part: feature:1912372-1912434:1:exon
so has part: feature:1915322-1915381:1:exon

XP_034769373.1
type: Protein
SIO_000068: ncbiprotein

position:1910137:1
position: 1910137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1915381:1
position: 1915381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1910137-1910227:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1911390-1911526:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1912372-1912434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1915322-1915381:1:exon

LOC117966786
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966786
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1927280..1941807
location: region:1927280-1941807:1
so has part: feature:1927280-1941807:1:exon

117966786
type: Gene
SIO_000068: ncbigene

position:1927280:1
position: 1927280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1941807:1
position: 1941807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1927280-1941807:1:exon

LOC117966786
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117966786
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117966786
subclass of: SO_0000673
so part of: LOC117966786
location: 1927280..1927798
location: region:1927280-1927798:1
so has part: feature:1927280-1927798:1:exon

position:1927798:1
position: 1927798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1927280-1927798:1:exon

LOC117966786
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117966786
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117966786
subclass of: SO_0000673
so part of: LOC117966786
location: 1930154..1930328
location: region:1930154-1930328:1
so has part: feature:1930154-1930328:1:exon

position:1930154:1
position: 1930154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1930328:1
position: 1930328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1930154-1930328:1:exon

LOC117966786
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117966786
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117966786
subclass of: SO_0000673
so part of: LOC117966786
location: 1930999..1931233
location: region:1930999-1931233:1
so has part: feature:1930999-1931233:1:exon

position:1930999:1
position: 1930999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1931233:1
position: 1931233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1930999-1931233:1:exon

LOC117966786
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117966786
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117966786
subclass of: SO_0000673
so part of: LOC117966786
location: 1933684..1933868
location: region:1933684-1933868:1
so has part: feature:1933684-1933868:1:exon

position:1933684:1
position: 1933684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1933868:1
position: 1933868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1933684-1933868:1:exon

LOC117966786
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117966786
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117966786
subclass of: SO_0000673
so part of: LOC117966786
location: 1934287..1934367
location: region:1934287-1934367:1
so has part: feature:1934287-1934367:1:exon

position:1934287:1
position: 1934287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1934367:1
position: 1934367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1934287-1934367:1:exon

LOC117966786
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117966786
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117966786
subclass of: SO_0000673
so part of: LOC117966786
location: 1936137..1936220
location: region:1936137-1936220:1
so has part: feature:1936137-1936220:1:exon

position:1936137:1
position: 1936137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1936220:1
position: 1936220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1936137-1936220:1:exon

LOC117966786
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117966786
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117966786
subclass of: SO_0000673
so part of: LOC117966786
location: 1936611..1936872
location: region:1936611-1936872:1
so has part: feature:1936611-1936872:1:exon

position:1936611:1
position: 1936611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1936872:1
position: 1936872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1936611-1936872:1:exon

LOC117966786
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117966786
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117966786
subclass of: SO_0000673
so part of: LOC117966786
location: 1936981..1937121
location: region:1936981-1937121:1
so has part: feature:1936981-1937121:1:exon

position:1936981:1
position: 1936981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1937121:1
position: 1937121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1936981-1937121:1:exon

LOC117966786
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117966786
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117966786
subclass of: SO_0000673
so part of: LOC117966786
location: 1940348..1940587
location: region:1940348-1940587:1
so has part: feature:1940348-1940587:1:exon

position:1940348:1
position: 1940348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1940587:1
position: 1940587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1940348-1940587:1:exon

LOC117966786
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117966786
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117966786
subclass of: SO_0000673
so part of: LOC117966786
location: 1940815..1941807
location: region:1940815-1941807:1
so has part: feature:1940815-1941807:1:exon

position:1940815:1
position: 1940815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1940815-1941807:1:exon

LOC117410188
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1978155..1981371
location: region:1978155-1981371:1
so has part: feature:1978155-1981371:1:exon
subclass of: SO_0000010

117410188
type: Gene
SIO_000068: ncbigene

position:1978155:1
position: 1978155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1981371:1
position: 1981371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1978155-1981371:1:exon

LOC117410188
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410188
product: visinin
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034016645.2
SIO_010081: LOC117410188
subclass of: SO_0000673
so part of: LOC117410188
location: join(1978155..1978641,1981073..1981185,1981298..1981371)
location: region:1978155-1981371:1
so has part: feature:1978155-1978641:1:exon
so has part: feature:1981073-1981185:1:exon
so has part: feature:1981298-1981371:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1978155-1978641:1:exon

position:1978641:1
position: 1978641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1981073-1981185:1:exon

position:1981073:1
position: 1981073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1981185:1
position: 1981185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1981298-1981371:1:exon

position:1981298:1
position: 1981298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117410188
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410188
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: visinin
translation: MGNAKSGAISQEMLDDLRQRTRFSEAELSRWFGEFRRECPTERVSQAEFERIYQRLFPDSDAQAYSSHVFRSFDVNGDGTLDFREYIIALHLTSSGLTSLKLEWAFSLFDVDNSGAITKGEVLEITRAIFKLIPEEERKDLPEDENTAEKRADKLWSYFGKKEKEKLLEGEFIEGVLENENALRLTKS
SIO_010081: LOC117410188
subclass of: SO_0000673
so part of: LOC117410188
location: join(1978261..1978641,1981073..1981185,1981298..1981371)
location: region:1978261-1981371:1
so has part: feature:1978261-1978641:1:exon
so has part: feature:1981073-1981185:1:exon
so has part: feature:1981298-1981371:1:exon

XP_033872536.2
type: Protein
SIO_000068: ncbiprotein

position:1978261:1
position: 1978261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1978261-1978641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1981073-1981185:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1981298-1981371:1:exon

LOC117966735
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1989716..1994891)
location: region:1989716-1994891:-1
so has part: feature:1989716-1994891:-1:exon
subclass of: SO_0000010

117966735
type: Gene
SIO_000068: ncbigene

position:1989716:-1
position: 1989716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1994891:-1
position: 1994891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1989716-1994891:-1:exon

LOC117966735
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966735
product: germ cell-specific gene 1-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913379.1
SIO_010081: LOC117966735
subclass of: SO_0000673
so part of: LOC117966735
location: complement(join(1989716..1990127,1992321..1992432,1993229..1993381,1993942..1993989,1994162..1994275,1994678..1994891))
location: region:1989716-1994891:-1
so has part: feature:1994678-1994891:-1:exon
so has part: feature:1994162-1994275:-1:exon
so has part: feature:1993942-1993989:-1:exon
so has part: feature:1993229-1993381:-1:exon
so has part: feature:1992321-1992432:-1:exon
so has part: feature:1989716-1990127:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1994678-1994891:-1:exon

position:1994678:-1
position: 1994678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1994162-1994275:-1:exon

position:1994162:-1
position: 1994162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1994275:-1
position: 1994275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1993942-1993989:-1:exon

position:1993942:-1
position: 1993942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1993989:-1
position: 1993989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1993229-1993381:-1:exon

position:1993229:-1
position: 1993229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1993381:-1
position: 1993381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1992321-1992432:-1:exon

position:1992321:-1
position: 1992321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1992432:-1
position: 1992432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1989716-1990127:-1:exon

position:1990127:-1
position: 1990127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117966735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966735
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(join(1994274..1994275, 1994678)),aa:OTHER)
product: LOW QUALITY PROTEIN: germ cell-specific gene 1-like protein
translation: MLAGSRSLLSLLLTSLALACSILAFSSSYWCEGQHKVVKPPCLSPIKTKNCGATQSQPSTAQTTTGQSSSSXVQQLNNAVQYIWETGEDKYTFRYFHTGFWYSCERHHDGEKCRSFIDLTPASEQGVLWLSVISEFLYISLLSVGFFLMSLEVLCSGNRMRRLKINAFAAIFTVLSGLLGMVAHMMYMTVFQMTVSLGPKDWRPQSWDYGWSFTLAWLSFSCCMAAACLTLNSYTKTRLELRCRQRLRLDEGRGGHAPSYDDVMLGAGHDRLFSISTLLELGDSGDHDDHDDDRAGHAPQQRVIEWVGPRIDPPPVFMDLECEECEREIEREIEEEWRDESNEERRDEFC
SIO_010081: LOC117966735
subclass of: SO_0000673
so part of: LOC117966735
location: complement(join(1989716..1990127,1992321..1992432,1993229..1993381,1993942..1993989,1994162..1994275,1994678..1994891))
location: region:1989716-1994891:-1
so has part: feature:1994678-1994891:-1:exon
so has part: feature:1994162-1994275:-1:exon
so has part: feature:1993942-1993989:-1:exon
so has part: feature:1993229-1993381:-1:exon
so has part: feature:1992321-1992432:-1:exon
so has part: feature:1989716-1990127:-1:exon

XP_034769270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1994678-1994891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1994162-1994275:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1993942-1993989:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1993229-1993381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1992321-1992432:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1989716-1990127:-1:exon

LOC117410198
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2001282..2007640)
location: region:2001282-2007640:-1
so has part: feature:2001282-2007640:-1:exon
subclass of: SO_0000010

117410198
type: Gene
SIO_000068: ncbigene

position:2001282:-1
position: 2001282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2007640:-1
position: 2007640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2001282-2007640:-1:exon

LOC117410198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410198
product: ubiquitin-like protein ATG12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034913484.1
SIO_010081: LOC117410198
subclass of: SO_0000673
so part of: LOC117410198
location: complement(join(2001282..2001589,2005647..2005709,2006480..2006616,2007511..2007640))
location: region:2001282-2007640:-1
so has part: feature:2007511-2007640:-1:exon
so has part: feature:2006480-2006616:-1:exon
so has part: feature:2005647-2005709:-1:exon
so has part: feature:2001282-2001589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2007511-2007640:-1:exon

position:2007511:-1
position: 2007511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2006480-2006616:-1:exon

position:2006480:-1
position: 2006480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2006616:-1
position: 2006616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2005647-2005709:-1:exon

position:2005647:-1
position: 2005647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2005709:-1
position: 2005709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2001282-2001589:-1:exon

position:2001589:-1
position: 2001589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117410198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-like protein ATG12
translation: MSESADSSAEPSAETATVEETAGSADEKKKIDILLKAVGDAPIMKTKKWSVERSRTVQALGLFIKKFLKLEPAEQLFIYVNQSFAPSPDQEVGTLFECFGSDGKLVLHYCKSQAWG
SIO_010081: LOC117410198
subclass of: SO_0000673
so part of: LOC117410198
location: complement(join(2001530..2001589,2005647..2005709,2006480..2006616,2007511..2007601))
location: region:2001530-2007601:-1
so has part: feature:2007511-2007601:-1:exon
so has part: feature:2006480-2006616:-1:exon
so has part: feature:2005647-2005709:-1:exon
so has part: feature:2001530-2001589:-1:exon

XP_034769375.1
type: Protein
SIO_000068: ncbiprotein

position:2001530:-1
position: 2001530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2007601:-1
position: 2007601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2007511-2007601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2006480-2006616:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2005647-2005709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2001530-2001589:-1:exon

LOC117966736
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966736
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2007847..2012621
location: region:2007847-2012621:1
so has part: feature:2007847-2012621:1:exon
subclass of: SO_0000010

117966736
type: Gene
SIO_000068: ncbigene

position:2007847:1
position: 2007847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2012621:1
position: 2012621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2007847-2012621:1:exon

LOC117966736
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966736
product: isochorismatase domain-containing protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034913380.1
SIO_010081: LOC117966736
subclass of: SO_0000673
so part of: LOC117966736
location: join(2007847..2007900,2009484..2009621,2009831..2010052,2012595..2012621)
location: region:2007847-2012621:1
so has part: feature:2007847-2007900:1:exon
so has part: feature:2009484-2009621:1:exon
so has part: feature:2009831-2010052:1:exon
so has part: feature:2012595-2012621:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2007847-2007900:1:exon

position:2007900:1
position: 2007900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2009484-2009621:1:exon

position:2009484:1
position: 2009484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2009621:1
position: 2009621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2009831-2010052:1:exon

position:2009831:1
position: 2009831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2010052:1
position: 2010052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2012595-2012621:1:exon

position:2012595:1
position: 2012595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117966736
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966736
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isochorismatase domain-containing protein 2-like
translation: MSRGRLSPQGTILLLCDLQEKFRPHIVHFGDIVSNAARLLQASRILGVPAIVSEQYPRGLGPTVPELGAQGVPTFSKTSFSMLTPEIEAALGGGGAGGGARSVLLCGIEAQACITVLSTSSTC
SIO_010081: LOC117966736
subclass of: SO_0000673
so part of: LOC117966736
location: join(2009499..2009621,2009831..2010052,2012595..2012621)
location: region:2009499-2012621:1
so has part: feature:2009499-2009621:1:exon
so has part: feature:2009831-2010052:1:exon
so has part: feature:2012595-2012621:1:exon

XP_034769271.1
type: Protein
SIO_000068: ncbiprotein

position:2009499:1
position: 2009499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2009499-2009621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2009831-2010052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2012595-2012621:1:exon

LOC117966789
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2020969..2027311)
location: region:2020969-2027311:-1
so has part: feature:2020969-2027311:-1:exon
subclass of: SO_0000010

117966789
type: Gene
SIO_000068: ncbigene

position:2020969:-1
position: 2020969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2027311:-1
position: 2027311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2020969-2027311:-1:exon

LOC117966789
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966789
product: epsin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034913469.1
SIO_010081: LOC117966789
subclass of: SO_0000673
so part of: LOC117966789
location: complement(join(2020969..2021295,2021778..2021962,2024012..2024246,2024924..2025082,2026770..2027311))
location: region:2020969-2027311:-1
so has part: feature:2026770-2027311:-1:exon
so has part: feature:2024924-2025082:-1:exon
so has part: feature:2024012-2024246:-1:exon
so has part: feature:2021778-2021962:-1:exon
so has part: feature:2020969-2021295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2026770-2027311:-1:exon

position:2026770:-1
position: 2026770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2024924-2025082:-1:exon

position:2024924:-1
position: 2024924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2025082:-1
position: 2025082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2024012-2024246:-1:exon

position:2024012:-1
position: 2024012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2024246:-1
position: 2024246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2021778-2021962:-1:exon

position:2021778:-1
position: 2021778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2021962:-1
position: 2021962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2020969-2021295:-1:exon

position:2021295:-1
position: 2021295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117966789
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epsin-1-like
translation: MSTSSLRRQVKNIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMVWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVAQQCRENIYAVQTLKDFQYIDRDGKDQGVNVREKAKQLVTLLKDEERLKEERVHALKTKEKMASSAPTLSGVSASAPLAGGVSGGGGVAGGVPGDPEQAWPQSSGEEDLQLQLALAMSKEEAEQLSAPPPRTDDELQLRVALSLSREEHDKVRGRVMEGGRGDAGRGGGGERKKEWKLSMQTETPLKHCFSAGSIEGRRVRSMPFPAALCERLQLPASFAGAAAEQA
SIO_010081: LOC117966789
subclass of: SO_0000673
so part of: LOC117966789
location: complement(join(2020984..2021295,2021778..2021962,2024012..2024246,2024924..2025082,2026770..2026838))
location: region:2020984-2026838:-1
so has part: feature:2026770-2026838:-1:exon
so has part: feature:2024924-2025082:-1:exon
so has part: feature:2024012-2024246:-1:exon
so has part: feature:2021778-2021962:-1:exon
so has part: feature:2020984-2021295:-1:exon

XP_034769360.1
type: Protein
SIO_000068: ncbiprotein

position:2020984:-1
position: 2020984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2026838:-1
position: 2026838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2026770-2026838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2024924-2025082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2024012-2024246:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2021778-2021962:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2020984-2021295:-1:exon

LOC117410022
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2064509..2073047
location: region:2064509-2073047:1
so has part: feature:2064509-2073047:1:exon
subclass of: SO_0000010

117410022
type: Gene
SIO_000068: ncbigene

position:2064509:1
position: 2064509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2073047:1
position: 2073047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2064509-2073047:1:exon

LOC117410022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410022
product: DNA polymerase delta subunit 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913381.1
SIO_010081: LOC117410022
subclass of: SO_0000673
so part of: LOC117410022
location: join(2064509..2065393,2065676..2065780,2073022..2073047)
location: region:2064509-2073047:1
so has part: feature:2064509-2065393:1:exon
so has part: feature:2065676-2065780:1:exon
so has part: feature:2073022-2073047:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2064509-2065393:1:exon

position:2065393:1
position: 2065393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2065676-2065780:1:exon

position:2065676:1
position: 2065676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2065780:1
position: 2065780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2073022-2073047:1:exon

position:2073022:1
position: 2073022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117410022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase delta subunit 4
translation: MPAKRKLITDSFKVVKKVKKEYTKCNILQEKERDVESPPTPPRSQRDCEMDLLREFDLNWEFGPCTGVQSVRSL
SIO_010081: LOC117410022
subclass of: SO_0000673
so part of: LOC117410022
location: join(2065300..2065393,2065676..2065780,2073022..2073047)
location: region:2065300-2073047:1
so has part: feature:2065300-2065393:1:exon
so has part: feature:2065676-2065780:1:exon
so has part: feature:2073022-2073047:1:exon

XP_034769272.1
type: Protein
SIO_000068: ncbiprotein

position:2065300:1
position: 2065300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2065300-2065393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2065676-2065780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2073022-2073047:1:exon

LOC117966738
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2083608..2111309)
location: region:2083608-2111309:-1
so has part: feature:2083608-2111309:-1:exon
subclass of: SO_0000010

117966738
type: Gene
SIO_000068: ncbigene

position:2083608:-1
position: 2083608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2111309:-1
position: 2111309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2083608-2111309:-1:exon

LOC117966738
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966738
product: lysine-specific demethylase 2A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913382.1
SIO_010081: LOC117966738
subclass of: SO_0000673
so part of: LOC117966738
location: complement(join(2083608..2083714,2084569..2084643,2091214..2091313,2092408..2092485,2094383..2094492,2096441..2096567,2097570..2097685,2098533..2098686,2099617..2099710,2100278..2100384,2103435..2103613,2105018..2105064,2105312..2105390,2105709..2105847,2110840..2110942,2111219..2111309))
location: region:2083608-2111309:-1
so has part: feature:2111219-2111309:-1:exon
so has part: feature:2110840-2110942:-1:exon
so has part: feature:2105709-2105847:-1:exon
so has part: feature:2105312-2105390:-1:exon
so has part: feature:2105018-2105064:-1:exon
so has part: feature:2103435-2103613:-1:exon
so has part: feature:2100278-2100384:-1:exon
so has part: feature:2099617-2099710:-1:exon
so has part: feature:2098533-2098686:-1:exon
so has part: feature:2097570-2097685:-1:exon
so has part: feature:2096441-2096567:-1:exon
so has part: feature:2094383-2094492:-1:exon
so has part: feature:2092408-2092485:-1:exon
so has part: feature:2091214-2091313:-1:exon
so has part: feature:2084569-2084643:-1:exon
so has part: feature:2083608-2083714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2111219-2111309:-1:exon

position:2111219:-1
position: 2111219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2110840-2110942:-1:exon

position:2110840:-1
position: 2110840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2110942:-1
position: 2110942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2105709-2105847:-1:exon

position:2105709:-1
position: 2105709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2105847:-1
position: 2105847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2105312-2105390:-1:exon

position:2105312:-1
position: 2105312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2105390:-1
position: 2105390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2105018-2105064:-1:exon

position:2105018:-1
position: 2105018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2105064:-1
position: 2105064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2103435-2103613:-1:exon

position:2103435:-1
position: 2103435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2103613:-1
position: 2103613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2100278-2100384:-1:exon

position:2100278:-1
position: 2100278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2100384:-1
position: 2100384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2099617-2099710:-1:exon

position:2099617:-1
position: 2099617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2099710:-1
position: 2099710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2098533-2098686:-1:exon

position:2098533:-1
position: 2098533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2098686:-1
position: 2098686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2097570-2097685:-1:exon

position:2097570:-1
position: 2097570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2097685:-1
position: 2097685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2096441-2096567:-1:exon

position:2096441:-1
position: 2096441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2096567:-1
position: 2096567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2094383-2094492:-1:exon

position:2094383:-1
position: 2094383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2094492:-1
position: 2094492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2092408-2092485:-1:exon

position:2092408:-1
position: 2092408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2092485:-1
position: 2092485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2091214-2091313:-1:exon

position:2091214:-1
position: 2091214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2091313:-1
position: 2091313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2084569-2084643:-1:exon

position:2084569:-1
position: 2084569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2084643:-1
position: 2084643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2083608-2083714:-1:exon

position:2083714:-1
position: 2083714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117966738
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 2A-like
translation: MEPEGAKVRYSKRLRSGTRRRYQDDGISDDEIEGKRTFDLEEKLISSNYNANFVKVMEGKDLTFEYIQREGLRDPLIFMKPDGLGIKMPDSDFGVNDVKHFVGSRRMIDVMDVSTQKGIEMSMSQWRRYYETPPEDREKLYNVISLEFSHTRLENLVKRPASVDLIDWVDNMWPRHLKERQRDSTNAIFDMKYPKVQKYCLMSVQGCYTDFHIDFGGTSVWYHIHKGGKVFWVIPPTPQNLELYENWVLSGKQGDIFLGDKVSGCQRIELKQGYTFMIPSGWIHAVYTPEDTLVFGGNFLHSFNIPMQLHIYNIEDRTRVPAKFRYPFYYEMCWYVLERYLYSLTSKSYLTKEFQRESLGIGLKSLAVSPQDGEPRHAALVQPPARRSHEGDALSTDATCDTDDVEDVEISVDNAAFMDEFFVQIEEIRTNIDKIDKNVSEVKKLYSLILSAPTSEQKTKDDLERLTVDIKKLANSSRNKLKSIEKNIEEDAERLSADLRIRKSQVQHSDTFLIHNQ
SIO_010081: LOC117966738
subclass of: SO_0000673
so part of: LOC117966738
location: complement(join(2083608..2083714,2084569..2084643,2091214..2091313,2092408..2092485,2094383..2094492,2096441..2096567,2097570..2097685,2098533..2098686,2099617..2099710,2100278..2100384,2103435..2103613,2105018..2105064,2105312..2105390,2105709..2105847,2110840..2110881))
location: region:2083608-2110881:-1
so has part: feature:2110840-2110881:-1:exon
so has part: feature:2105709-2105847:-1:exon
so has part: feature:2105312-2105390:-1:exon
so has part: feature:2105018-2105064:-1:exon
so has part: feature:2103435-2103613:-1:exon
so has part: feature:2100278-2100384:-1:exon
so has part: feature:2099617-2099710:-1:exon
so has part: feature:2098533-2098686:-1:exon
so has part: feature:2097570-2097685:-1:exon
so has part: feature:2096441-2096567:-1:exon
so has part: feature:2094383-2094492:-1:exon
so has part: feature:2092408-2092485:-1:exon
so has part: feature:2091214-2091313:-1:exon
so has part: feature:2084569-2084643:-1:exon
so has part: feature:2083608-2083714:-1:exon

XP_034769273.1
type: Protein
SIO_000068: ncbiprotein

position:2110881:-1
position: 2110881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2110840-2110881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2105709-2105847:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2105312-2105390:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2105018-2105064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2103435-2103613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2100278-2100384:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2099617-2099710:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2098533-2098686:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2097570-2097685:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2096441-2096567:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2094383-2094492:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2092408-2092485:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2091214-2091313:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2084569-2084643:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2083608-2083714:-1:exon

LOC117410226
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2117355..2128833)
location: region:2117355-2128833:-1
so has part: feature:2117355-2128833:-1:exon

117410226
type: Gene
SIO_000068: ncbigene

position:2117355:-1
position: 2117355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2128833:-1
position: 2128833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2117355-2128833:-1:exon

LOC117410226
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117410226
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117410226
subclass of: SO_0000673
so part of: LOC117410226
location: complement(2117355..2117633)
location: region:2117355-2117633:-1
so has part: feature:2117355-2117633:-1:exon

position:2117633:-1
position: 2117633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2117355-2117633:-1:exon

LOC117410226
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117410226
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117410226
subclass of: SO_0000673
so part of: LOC117410226
location: complement(2121166..2121337)
location: region:2121166-2121337:-1
so has part: feature:2121166-2121337:-1:exon

position:2121166:-1
position: 2121166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2121337:-1
position: 2121337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2121166-2121337:-1:exon

LOC117410226
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117410226
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117410226
subclass of: SO_0000673
so part of: LOC117410226
location: complement(2122297..2122406)
location: region:2122297-2122406:-1
so has part: feature:2122297-2122406:-1:exon

position:2122297:-1
position: 2122297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2122406:-1
position: 2122406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2122297-2122406:-1:exon

LOC117410226
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117410226
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117410226
subclass of: SO_0000673
so part of: LOC117410226
location: complement(2124093..2124180)
location: region:2124093-2124180:-1
so has part: feature:2124093-2124180:-1:exon

position:2124093:-1
position: 2124093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2124180:-1
position: 2124180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2124093-2124180:-1:exon

LOC117410226
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117410226
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117410226
subclass of: SO_0000673
so part of: LOC117410226
location: complement(2128331..2128833)
location: region:2128331-2128833:-1
so has part: feature:2128331-2128833:-1:exon

position:2128331:-1
position: 2128331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2128331-2128833:-1:exon

LOC117966796
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2139916..2147181
location: region:2139916-2147181:1
so has part: feature:2139916-2147181:1:exon
subclass of: SO_0000011

117966796
type: Gene
SIO_000068: ncbigene

position:2139916:1
position: 2139916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2147181:1
position: 2147181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2139916-2147181:1:exon

LOC117966796
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117966796
product: uncharacterized LOC117966796
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004661789.1
SIO_010081: LOC117966796
subclass of: SO_0000673
so part of: LOC117966796
location: join(2139916..2140156,2146800..2147181)
location: region:2139916-2147181:1
so has part: feature:2139916-2140156:1:exon
so has part: feature:2146800-2147181:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2139916-2140156:1:exon

position:2140156:1
position: 2140156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2146800-2147181:1:exon

position:2146800:1
position: 2146800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117966795
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966795
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2149266..2155579)
location: region:2149266-2155579:-1
so has part: feature:2149266-2155579:-1:exon
subclass of: SO_0000010

117966795
type: Gene
SIO_000068: ncbigene

position:2149266:-1
position: 2149266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2155579:-1
position: 2155579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2149266-2155579:-1:exon

LOC117966795
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966795
product: syntaxin-3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034913485.1
SIO_010081: LOC117966795
subclass of: SO_0000673
so part of: LOC117966795
location: complement(join(2149266..2150201,2152706..2152833,2154912..2155022,2155483..2155579))
location: region:2149266-2155579:-1
so has part: feature:2155483-2155579:-1:exon
so has part: feature:2154912-2155022:-1:exon
so has part: feature:2152706-2152833:-1:exon
so has part: feature:2149266-2150201:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2155483-2155579:-1:exon

position:2155483:-1
position: 2155483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2154912-2155022:-1:exon

position:2154912:-1
position: 2154912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2155022:-1
position: 2155022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2152706-2152833:-1:exon

position:2152706:-1
position: 2152706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2152833:-1
position: 2152833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2149266-2150201:-1:exon

position:2150201:-1
position: 2150201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117966795
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7906
gene: LOC117966795
product: syntaxin-3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004661788.1
SIO_010081: LOC117966795
so part of: LOC117966795
location: complement(join(2149266..2150201,2154157..2154299))
location: region:2149266-2154299:-1
so has part: feature:2154157-2154299:-1:exon
so has part: feature:2149266-2150201:-1:exon

position:2154299:-1
position: 2154299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2154157-2154299:-1:exon

position:2154157:-1
position: 2154157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2149266-2150201:-1:exon

LOC117966795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966795
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-3-like
translation: MVNNIAVNVLKSVDHVETAKAETKKAVKYQSRARKKALILALVLLLSLCVLALIIGLAVGLTATQRGSQPASPTAPSSN
SIO_010081: LOC117966795
subclass of: SO_0000673
so part of: LOC117966795
location: complement(join(2150195..2150201,2152706..2152833,2154912..2155016))
location: region:2150195-2155016:-1
so has part: feature:2154912-2155016:-1:exon
so has part: feature:2152706-2152833:-1:exon
so has part: feature:2150195-2150201:-1:exon

XP_034769376.1
type: Protein
SIO_000068: ncbiprotein

position:2150195:-1
position: 2150195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2155016:-1
position: 2155016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2154912-2155016:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2152706-2152833:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2150195-2150201:-1:exon

sphk2
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: sphk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2218085..2226448)
location: region:2218085-2226448:-1
so has part: feature:2218085-2226448:-1:exon
subclass of: SO_0000010

117409982
type: Gene
SIO_000068: ncbigene

position:2218085:-1
position: 2218085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2226448:-1
position: 2226448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2218085-2226448:-1:exon

sphk2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: sphk2
product: sphingosine kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034913458.1
SIO_010081: sphk2
subclass of: SO_0000673
so part of: sphk2
location: complement(join(2218085..2220918,2221098..2222532,2222757..2222872,2223005..2223099,2223252..2223401,2224645..2226448))
location: region:2218085-2226448:-1
so has part: feature:2224645-2226448:-1:exon
so has part: feature:2223252-2223401:-1:exon
so has part: feature:2223005-2223099:-1:exon
so has part: feature:2222757-2222872:-1:exon
so has part: feature:2221098-2222532:-1:exon
so has part: feature:2218085-2220918:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2224645-2226448:-1:exon

position:2224645:-1
position: 2224645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2223252-2223401:-1:exon

position:2223252:-1
position: 2223252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2223401:-1
position: 2223401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2223005-2223099:-1:exon

position:2223005:-1
position: 2223005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2223099:-1
position: 2223099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2222757-2222872:-1:exon

position:2222757:-1
position: 2222757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2222872:-1
position: 2222872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2221098-2222532:-1:exon

position:2221098:-1
position: 2221098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2222532:-1
position: 2222532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2218085-2220918:-1:exon

position:2220918:-1
position: 2220918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sphk2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: sphk2
product: sphingosine kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034913460.1
SIO_010081: sphk2
subclass of: SO_0000673
so part of: sphk2
location: complement(join(2218085..2220918,2221098..2222532,2222757..2222872,2223005..2223099,2223252..2223401,2224514..2224574))
location: region:2218085-2224574:-1
so has part: feature:2224514-2224574:-1:exon
so has part: feature:2223252-2223401:-1:exon
so has part: feature:2223005-2223099:-1:exon
so has part: feature:2222757-2222872:-1:exon
so has part: feature:2221098-2222532:-1:exon
so has part: feature:2218085-2220918:-1:exon

position:2224574:-1
position: 2224574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2224514-2224574:-1:exon

position:2224514:-1
position: 2224514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2223252-2223401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2223005-2223099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2222757-2222872:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2221098-2222532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2218085-2220918:-1:exon

sphk2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: sphk2
product: sphingosine kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034913459.1
SIO_010081: sphk2
subclass of: SO_0000673
so part of: sphk2
location: complement(join(2218085..2220918,2221098..2222532,2222757..2222872,2223005..2223099,2223252..2223401,2224361..2224421))
location: region:2218085-2224421:-1
so has part: feature:2224361-2224421:-1:exon
so has part: feature:2223252-2223401:-1:exon
so has part: feature:2223005-2223099:-1:exon
so has part: feature:2222757-2222872:-1:exon
so has part: feature:2221098-2222532:-1:exon
so has part: feature:2218085-2220918:-1:exon

position:2224421:-1
position: 2224421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2224361-2224421:-1:exon

position:2224361:-1
position: 2224361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2223252-2223401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2223005-2223099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2222757-2222872:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2221098-2222532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2218085-2220918:-1:exon

sphk2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: sphk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingosine kinase 2 isoform X1
translation: MRSPAEFPSVPFSEAILHGEFGDHSGGTGGGSGPRYALTLTPTELHIQRLVPRPQDDRRTVVSLSDVVGCHVMRRKASPARGGGAEEGEGPAYFSLYSYPVKKRRMGGGRCRQRVVRTFRVDSAARVSENRSVAEKWMTAVLCLLRGVNLTGATEITSSLLPRPRRLLLLVNPFSGQGQAMQLCHTHILPMVREANISYNLIQTERPNHARELMRELALQEWDGIVIISGDGLLHEVINGLMARGDWKQAIQTPVGILPCGSGNALAGAINHNAGFEMCLRDPLLMNCCFLLCRGGVCPMDLVSITMSTSITAKHPGENTEREPERLASEEEEAGSASSGRGVHRRLFSFLSVAWGFVSDVDIESERYRGLGSARFTMGTLVRLASLRSYRGRLSYLPQSATSLSSLSLPPLAQLQQQPPRRPLSRSITEGLGACSRLPLHRTVSDMGLSEERNLLKRNTPSALSPVPGCLQEVVQPACAPPSDGTPTEQAASSCFAEGVPSISEAASPDAGHPYKTAPTQEMPASLAPPIPSPSPSPSSSHHYLTSAFTFDLPVSDDQNSTPVLNHHSESGSRARAGERAAQSNGTVDHAEQQSTFLARTMDALGSVTQERGVKSGPGQRNHFPPRAEDETGPVDGLLQPLDRPVPKNWVTLEGDFVLVLALYQSHLGADLFAAPQARFDDGTIHLSFVRAGISRGVLLRLFLAMERGTHQEIESPFVSHIQTRAFRLEPLSHRGTLTVDGELVPYGSLQAQVHPGMGRLIVGDPAVKITKF
SIO_010081: sphk2
subclass of: SO_0000673
so part of: sphk2
location: complement(join(2220856..2220918,2221098..2222532,2222757..2222872,2223005..2223099,2223252..2223401,2224645..2225107))
location: region:2220856-2225107:-1
so has part: feature:2224645-2225107:-1:exon
so has part: feature:2223252-2223401:-1:exon
so has part: feature:2223005-2223099:-1:exon
so has part: feature:2222757-2222872:-1:exon
so has part: feature:2221098-2222532:-1:exon
so has part: feature:2220856-2220918:-1:exon

XP_034769349.1
type: Protein
SIO_000068: ncbiprotein

position:2220856:-1
position: 2220856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2225107:-1
position: 2225107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2224645-2225107:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2223252-2223401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2223005-2223099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2222757-2222872:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2221098-2222532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2220856-2220918:-1:exon

sphk2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: sphk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingosine kinase 1 isoform X3
translation: MKWMTAVLCLLRGVNLTGATEITSSLLPRPRRLLLLVNPFSGQGQAMQLCHTHILPMVREANISYNLIQTERPNHARELMRELALQEWDGIVIISGDGLLHEVINGLMARGDWKQAIQTPVGILPCGSGNALAGAINHNAGFEMCLRDPLLMNCCFLLCRGGVCPMDLVSITMSTSITAKHPGENTEREPERLASEEEEAGSASSGRGVHRRLFSFLSVAWGFVSDVDIESERYRGLGSARFTMGTLVRLASLRSYRGRLSYLPQSATSLSSLSLPPLAQLQQQPPRRPLSRSITEGLGACSRLPLHRTVSDMGLSEERNLLKRNTPSALSPVPGCLQEVVQPACAPPSDGTPTEQAASSCFAEGVPSISEAASPDAGHPYKTAPTQEMPASLAPPIPSPSPSPSSSHHYLTSAFTFDLPVSDDQNSTPVLNHHSESGSRARAGERAAQSNGTVDHAEQQSTFLARTMDALGSVTQERGVKSGPGQRNHFPPRAEDETGPVDGLLQPLDRPVPKNWVTLEGDFVLVLALYQSHLGADLFAAPQARFDDGTIHLSFVRAGISRGVLLRLFLAMERGTHQEIESPFVSHIQTRAFRLEPLSHRGTLTVDGELVPYGSLQAQVHPGMGRLIVGDPAVKITKF
SIO_010081: sphk2
subclass of: SO_0000673
so part of: sphk2
location: complement(join(2220856..2220918,2221098..2222532,2222757..2222872,2223005..2223099,2223252..2223401,2224514..2224574))
location: region:2220856-2224574:-1
so has part: feature:2224514-2224574:-1:exon
so has part: feature:2223252-2223401:-1:exon
so has part: feature:2223005-2223099:-1:exon
so has part: feature:2222757-2222872:-1:exon
so has part: feature:2221098-2222532:-1:exon
so has part: feature:2220856-2220918:-1:exon

XP_034769351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2224514-2224574:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2223252-2223401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2223005-2223099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2222757-2222872:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2221098-2222532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2220856-2220918:-1:exon

sphk2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: sphk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingosine kinase 1 isoform X2
translation: MKWVTAVLCLLRGVNLTGATEITSSLLPRPRRLLLLVNPFSGQGQAMQLCHTHILPMVREANISYNLIQTERPNHARELMRELALQEWDGIVIISGDGLLHEVINGLMARGDWKQAIQTPVGILPCGSGNALAGAINHNAGFEMCLRDPLLMNCCFLLCRGGVCPMDLVSITMSTSITAKHPGENTEREPERLASEEEEAGSASSGRGVHRRLFSFLSVAWGFVSDVDIESERYRGLGSARFTMGTLVRLASLRSYRGRLSYLPQSATSLSSLSLPPLAQLQQQPPRRPLSRSITEGLGACSRLPLHRTVSDMGLSEERNLLKRNTPSALSPVPGCLQEVVQPACAPPSDGTPTEQAASSCFAEGVPSISEAASPDAGHPYKTAPTQEMPASLAPPIPSPSPSPSSSHHYLTSAFTFDLPVSDDQNSTPVLNHHSESGSRARAGERAAQSNGTVDHAEQQSTFLARTMDALGSVTQERGVKSGPGQRNHFPPRAEDETGPVDGLLQPLDRPVPKNWVTLEGDFVLVLALYQSHLGADLFAAPQARFDDGTIHLSFVRAGISRGVLLRLFLAMERGTHQEIESPFVSHIQTRAFRLEPLSHRGTLTVDGELVPYGSLQAQVHPGMGRLIVGDPAVKITKF
SIO_010081: sphk2
subclass of: SO_0000673
so part of: sphk2
location: complement(join(2220856..2220918,2221098..2222532,2222757..2222872,2223005..2223099,2223252..2223401,2224361..2224421))
location: region:2220856-2224421:-1
so has part: feature:2224361-2224421:-1:exon
so has part: feature:2223252-2223401:-1:exon
so has part: feature:2223005-2223099:-1:exon
so has part: feature:2222757-2222872:-1:exon
so has part: feature:2221098-2222532:-1:exon
so has part: feature:2220856-2220918:-1:exon

XP_034769350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2224361-2224421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2223252-2223401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2223005-2223099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2222757-2222872:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2221098-2222532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2220856-2220918:-1:exon

rpl18
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: rpl18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2229849..2235855)
location: region:2229849-2235855:-1
so has part: feature:2229849-2235855:-1:exon
subclass of: SO_0000010

117410190
type: Gene
SIO_000068: ncbigene

position:2229849:-1
position: 2229849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2235855:-1
position: 2235855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2229849-2235855:-1:exon

rpl18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: rpl18
product: ribosomal protein L18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034016647.2
SIO_010081: rpl18
subclass of: SO_0000673
so part of: rpl18
location: complement(join(2229849..2230014,2230935..2231004,2231740..2231863,2232731..2232829,2233579..2233686,2233988..2234074,2235671..2235855))
location: region:2229849-2235855:-1
so has part: feature:2235671-2235855:-1:exon
so has part: feature:2233988-2234074:-1:exon
so has part: feature:2233579-2233686:-1:exon
so has part: feature:2232731-2232829:-1:exon
so has part: feature:2231740-2231863:-1:exon
so has part: feature:2230935-2231004:-1:exon
so has part: feature:2229849-2230014:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2235671-2235855:-1:exon

position:2235671:-1
position: 2235671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2233988-2234074:-1:exon

position:2233988:-1
position: 2233988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2234074:-1
position: 2234074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2233579-2233686:-1:exon

position:2233579:-1
position: 2233579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2233686:-1
position: 2233686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2232731-2232829:-1:exon

position:2232731:-1
position: 2232731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2232829:-1
position: 2232829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2231740-2231863:-1:exon

position:2231740:-1
position: 2231740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2231863:-1
position: 2231863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2230935-2231004:-1:exon

position:2230935:-1
position: 2230935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2231004:-1
position: 2231004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2229849-2230014:-1:exon

position:2230014:-1
position: 2230014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rpl18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: rpl18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L18
translation: MGVDIRHNKDRKVHRKEPKSQDIYLRLLVKLYRFLARRSNASFNKVVLKRLFMSRTNRPPLSLSRLIRKMKLTGRENKTAVIVGTITDDVRIQDIPKLKVCALRVTDGARNRILKSGGQIMTFDQLALATPKGHGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYIRSKGRKFERARGRRASRGYKN
SIO_010081: rpl18
subclass of: SO_0000673
so part of: rpl18
location: complement(join(2229939..2230014,2230935..2231004,2231740..2231863,2232731..2232829,2233579..2233686,2233988..2234074,2235671..2235673))
location: region:2229939-2235673:-1
so has part: feature:2235671-2235673:-1:exon
so has part: feature:2233988-2234074:-1:exon
so has part: feature:2233579-2233686:-1:exon
so has part: feature:2232731-2232829:-1:exon
so has part: feature:2231740-2231863:-1:exon
so has part: feature:2230935-2231004:-1:exon
so has part: feature:2229939-2230014:-1:exon

XP_033872538.1
type: Protein
SIO_000068: ncbiprotein

position:2229939:-1
position: 2229939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2235673:-1
position: 2235673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2235671-2235673:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2233988-2234074:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2233579-2233686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2232731-2232829:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2231740-2231863:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2230935-2231004:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2229939-2230014:-1:exon

si:ch211-120k19.1
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: si:ch211-120k19.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2237133..2240462)
location: region:2237133-2240462:-1
so has part: feature:2237133-2240462:-1:exon
subclass of: SO_0000010

117966791
type: Gene
SIO_000068: ncbigene

position:2237133:-1
position: 2237133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2240462:-1
position: 2240462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2237133-2240462:-1:exon

si:ch211-120k19.1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: si:ch211-120k19.1
product: uncharacterized protein LOC563199 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034913477.1
SIO_010081: si:ch211-120k19.1
subclass of: SO_0000673
so part of: si:ch211-120k19.1
location: complement(join(2237133..2237817,2238256..2238285,2238620..2238690,2238931..2239366,2240407..2240462))
location: region:2237133-2240462:-1
so has part: feature:2240407-2240462:-1:exon
so has part: feature:2238931-2239366:-1:exon
so has part: feature:2238620-2238690:-1:exon
so has part: feature:2238256-2238285:-1:exon
so has part: feature:2237133-2237817:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2240407-2240462:-1:exon

position:2240407:-1
position: 2240407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2238931-2239366:-1:exon

position:2238931:-1
position: 2238931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2239366:-1
position: 2239366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2238620-2238690:-1:exon

position:2238620:-1
position: 2238620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2238690:-1
position: 2238690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2238256-2238285:-1:exon

position:2238256:-1
position: 2238256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2238285:-1
position: 2238285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2237133-2237817:-1:exon

position:2237817:-1
position: 2237817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

si:ch211-120k19.1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: si:ch211-120k19.1
product: uncharacterized protein LOC563199 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034913478.1
SIO_010081: si:ch211-120k19.1
subclass of: SO_0000673
so part of: si:ch211-120k19.1
location: complement(join(2237133..2237817,2238256..2238285,2238620..2238690,2238931..2239363,2239776..2239995))
location: region:2237133-2239995:-1
so has part: feature:2239776-2239995:-1:exon
so has part: feature:2238931-2239363:-1:exon
so has part: feature:2238620-2238690:-1:exon
so has part: feature:2238256-2238285:-1:exon
so has part: feature:2237133-2237817:-1:exon

position:2239995:-1
position: 2239995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2239776-2239995:-1:exon

position:2239776:-1
position: 2239776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2238931-2239363:-1:exon

position:2239363:-1
position: 2239363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2238620-2238690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2238256-2238285:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2237133-2237817:-1:exon

si:ch211-120k19.1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: si:ch211-120k19.1
product: uncharacterized protein LOC563199 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034913476.1
SIO_010081: si:ch211-120k19.1
subclass of: SO_0000673
so part of: si:ch211-120k19.1
location: complement(join(2237133..2237817,2238256..2238285,2238620..2238690,2238931..2239366,2239776..2239995))
location: region:2237133-2239995:-1
so has part: feature:2239776-2239995:-1:exon
so has part: feature:2238931-2239366:-1:exon
so has part: feature:2238620-2238690:-1:exon
so has part: feature:2238256-2238285:-1:exon
so has part: feature:2237133-2237817:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2239776-2239995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2238931-2239366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2238620-2238690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2238256-2238285:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2237133-2237817:-1:exon

si:ch211-120k19.1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: si:ch211-120k19.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mpv17-like protein
translation: MYRLRYVFQTHPWATNVVAYSTLFAGADLLQQCMLGDKEAGPQGEAEPLSKGVVAGQEALWSRVDFSQTAKVALIGFCFHANFNFYWLRALERGFPGGGARNVGKKVVVDQLVAAPATITAFYTGLSVLDRKEDVFEDLRNKFWPSYQTGLVYWSAVQAVNFSLVPPVVRTAFIGGCAFVWTAFLCYLRQHDTDRGLQALLQSISNSISPARGDRDSVHQTLSTANTESIAAQCTPDPKHSKH
SIO_010081: si:ch211-120k19.1
subclass of: SO_0000673
so part of: si:ch211-120k19.1
location: complement(join(2237560..2237817,2238256..2238285,2238620..2238690,2238931..2239303))
location: region:2237560-2239303:-1
so has part: feature:2238931-2239303:-1:exon
so has part: feature:2238620-2238690:-1:exon
so has part: feature:2238256-2238285:-1:exon
so has part: feature:2237560-2237817:-1:exon

XP_034769367.1
type: Protein
SIO_000068: ncbiprotein

position:2237560:-1
position: 2237560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2239303:-1
position: 2239303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2238931-2239303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2238620-2238690:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2238256-2238285:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2237560-2237817:-1:exon

si:ch211-120k19.1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: si:ch211-120k19.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mpv17-like protein
translation: MYRLRYVFQTHPWATNVVAYSTLFAGADLLQQCMLGDKEAGPQGEAEPLSKGVVAGQEALWSRVDFSQTAKVALIGFCFHANFNFYWLRALERGFPGGGARNVGKKVVVDQLVAAPATITAFYTGLSVLDRKEDVFEDLRNKFWPSYQTGLVYWSAVQAVNFSLVPPVVRTAFIGGCAFVWTAFLCYLRQHDTDRGLQALLQSISNSISPARGDRDSVHQTLSTANTESIAAQCTPDPKHSKH
SIO_010081: si:ch211-120k19.1
subclass of: SO_0000673
so part of: si:ch211-120k19.1
location: complement(join(2237560..2237817,2238256..2238285,2238620..2238690,2238931..2239303))
location: region:2237560-2239303:-1
so has part: feature:2238931-2239303:-1:exon
so has part: feature:2238620-2238690:-1:exon
so has part: feature:2238256-2238285:-1:exon
so has part: feature:2237560-2237817:-1:exon

XP_034769368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2238931-2239303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2238620-2238690:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2238256-2238285:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2237560-2237817:-1:exon

si:ch211-120k19.1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: si:ch211-120k19.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mpv17-like protein
translation: MYRLRYVFQTHPWATNVVAYSTLFAGADLLQQCMLGDKEAGPQGEAEPLSKGVVAGQEALWSRVDFSQTAKVALIGFCFHANFNFYWLRALERGFPGGGARNVGKKVVVDQLVAAPATITAFYTGLSVLDRKEDVFEDLRNKFWPSYQTGLVYWSAVQAVNFSLVPPVVRTAFIGGCAFVWTAFLCYLRQHDTDRGLQALLQSISNSISPARGDRDSVHQTLSTANTESIAAQCTPDPKHSKH
SIO_010081: si:ch211-120k19.1
subclass of: SO_0000673
so part of: si:ch211-120k19.1
location: complement(join(2237560..2237817,2238256..2238285,2238620..2238690,2238931..2239303))
location: region:2237560-2239303:-1
so has part: feature:2238931-2239303:-1:exon
so has part: feature:2238620-2238690:-1:exon
so has part: feature:2238256-2238285:-1:exon
so has part: feature:2237560-2237817:-1:exon

XP_034769369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2238931-2239303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2238620-2238690:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2238256-2238285:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2237560-2237817:-1:exon

myh14
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: myh14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2243079..2271806
location: region:2243079-2271806:1
so has part: feature:2243079-2271806:1:exon
subclass of: SO_0000010

117410060
type: Gene
SIO_000068: ncbigene

position:2243079:1
position: 2243079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2271806:1
position: 2271806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2243079-2271806:1:exon

myh14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: myh14
product: myosin, heavy chain 14, non-muscle
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913486.1
SIO_010081: myh14
subclass of: SO_0000673
so part of: myh14
location: join(2243079..2243235,2246272..2246428,2247031..2247237,2248976..2249132,2250604..2250631,2250811..2250919,2251088..2251117,2251490..2251507,2251769..2251861,2252527..2252590,2253628..2253726,2253911..2254048,2254211..2254217,2254461..2254556,2254726..2254844,2255065..2255217,2255462..2255593,2255680..2255703,2255858..2256035,2256494..2256608,2258619..2258818,2258937..2259058,2259328..2259397,2259499..2259659,2260002..2260110,2260343..2260474,2261075..2261281,2261390..2261527,2261713..2261836,2261968..2262139,2262649..2262861,2263010..2263154,2263408..2263614,2263965..2264069,2264349..2264501,2264638..2264824,2264900..2264961,2265826..2266038,2266739..2266951,2267287..2267448,2267678..2267806,2268393..2268481,2269207..2269539,2269855..2269963,2270935..2271107,2271570..2271806)
location: region:2243079-2271806:1
so has part: feature:2243079-2243235:1:exon
so has part: feature:2246272-2246428:1:exon
so has part: feature:2247031-2247237:1:exon
so has part: feature:2248976-2249132:1:exon
so has part: feature:2250604-2250631:1:exon
so has part: feature:2250811-2250919:1:exon
so has part: feature:2251088-2251117:1:exon
so has part: feature:2251490-2251507:1:exon
so has part: feature:2251769-2251861:1:exon
so has part: feature:2252527-2252590:1:exon
so has part: feature:2253628-2253726:1:exon
so has part: feature:2253911-2254048:1:exon
so has part: feature:2254211-2254217:1:exon
so has part: feature:2254461-2254556:1:exon
so has part: feature:2254726-2254844:1:exon
so has part: feature:2255065-2255217:1:exon
so has part: feature:2255462-2255593:1:exon
so has part: feature:2255680-2255703:1:exon
so has part: feature:2255858-2256035:1:exon
so has part: feature:2256494-2256608:1:exon
so has part: feature:2258619-2258818:1:exon
so has part: feature:2258937-2259058:1:exon
so has part: feature:2259328-2259397:1:exon
so has part: feature:2259499-2259659:1:exon
so has part: feature:2260002-2260110:1:exon
so has part: feature:2260343-2260474:1:exon
so has part: feature:2261075-2261281:1:exon
so has part: feature:2261390-2261527:1:exon
so has part: feature:2261713-2261836:1:exon
so has part: feature:2261968-2262139:1:exon
so has part: feature:2262649-2262861:1:exon
so has part: feature:2263010-2263154:1:exon
so has part: feature:2263408-2263614:1:exon
so has part: feature:2263965-2264069:1:exon
so has part: feature:2264349-2264501:1:exon
so has part: feature:2264638-2264824:1:exon
so has part: feature:2264900-2264961:1:exon
so has part: feature:2265826-2266038:1:exon
so has part: feature:2266739-2266951:1:exon
so has part: feature:2267287-2267448:1:exon
so has part: feature:2267678-2267806:1:exon
so has part: feature:2268393-2268481:1:exon
so has part: feature:2269207-2269539:1:exon
so has part: feature:2269855-2269963:1:exon
so has part: feature:2270935-2271107:1:exon
so has part: feature:2271570-2271806:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2243079-2243235:1:exon

position:2243235:1
position: 2243235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2246272-2246428:1:exon

position:2246272:1
position: 2246272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2246428:1
position: 2246428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2247031-2247237:1:exon

position:2247031:1
position: 2247031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2247237:1
position: 2247237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2248976-2249132:1:exon

position:2248976:1
position: 2248976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2249132:1
position: 2249132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2250604-2250631:1:exon

position:2250604:1
position: 2250604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2250631:1
position: 2250631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2250811-2250919:1:exon

position:2250811:1
position: 2250811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2250919:1
position: 2250919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2251088-2251117:1:exon

position:2251088:1
position: 2251088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2251117:1
position: 2251117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2251490-2251507:1:exon

position:2251490:1
position: 2251490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2251507:1
position: 2251507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2251769-2251861:1:exon

position:2251769:1
position: 2251769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2251861:1
position: 2251861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2252527-2252590:1:exon

position:2252527:1
position: 2252527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2252590:1
position: 2252590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2253628-2253726:1:exon

position:2253628:1
position: 2253628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2253726:1
position: 2253726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2253911-2254048:1:exon

position:2253911:1
position: 2253911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2254048:1
position: 2254048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2254211-2254217:1:exon

position:2254211:1
position: 2254211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2254217:1
position: 2254217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2254461-2254556:1:exon

position:2254461:1
position: 2254461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2254556:1
position: 2254556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2254726-2254844:1:exon

position:2254726:1
position: 2254726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2254844:1
position: 2254844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2255065-2255217:1:exon

position:2255065:1
position: 2255065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2255217:1
position: 2255217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2255462-2255593:1:exon

position:2255462:1
position: 2255462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2255593:1
position: 2255593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2255680-2255703:1:exon

position:2255680:1
position: 2255680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2255703:1
position: 2255703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2255858-2256035:1:exon

position:2255858:1
position: 2255858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2256035:1
position: 2256035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2256494-2256608:1:exon

position:2256494:1
position: 2256494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2256608:1
position: 2256608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2258619-2258818:1:exon

position:2258619:1
position: 2258619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2258818:1
position: 2258818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2258937-2259058:1:exon

position:2258937:1
position: 2258937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2259058:1
position: 2259058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2259328-2259397:1:exon

position:2259328:1
position: 2259328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2259397:1
position: 2259397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2259499-2259659:1:exon

position:2259499:1
position: 2259499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2259659:1
position: 2259659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2260002-2260110:1:exon

position:2260002:1
position: 2260002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2260110:1
position: 2260110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2260343-2260474:1:exon

position:2260343:1
position: 2260343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2260474:1
position: 2260474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2261075-2261281:1:exon

position:2261075:1
position: 2261075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2261281:1
position: 2261281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2261390-2261527:1:exon

position:2261390:1
position: 2261390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2261527:1
position: 2261527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2261713-2261836:1:exon

position:2261713:1
position: 2261713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2261836:1
position: 2261836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2261968-2262139:1:exon

position:2261968:1
position: 2261968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2262139:1
position: 2262139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2262649-2262861:1:exon

position:2262649:1
position: 2262649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2262861:1
position: 2262861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2263010-2263154:1:exon

position:2263010:1
position: 2263010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2263154:1
position: 2263154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2263408-2263614:1:exon

position:2263408:1
position: 2263408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2263614:1
position: 2263614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2263965-2264069:1:exon

position:2263965:1
position: 2263965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2264069:1
position: 2264069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2264349-2264501:1:exon

position:2264349:1
position: 2264349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2264501:1
position: 2264501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2264638-2264824:1:exon

position:2264638:1
position: 2264638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2264824:1
position: 2264824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:2264900-2264961:1:exon

position:2264900:1
position: 2264900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2264961:1
position: 2264961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:2265826-2266038:1:exon

position:2265826:1
position: 2265826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2266038:1
position: 2266038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:2266739-2266951:1:exon

position:2266739:1
position: 2266739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2266951:1
position: 2266951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:2267287-2267448:1:exon

position:2267287:1
position: 2267287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2267448:1
position: 2267448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:2267678-2267806:1:exon

position:2267678:1
position: 2267678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2267806:1
position: 2267806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:2268393-2268481:1:exon

position:2268393:1
position: 2268393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2268481:1
position: 2268481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:2269207-2269539:1:exon

position:2269207:1
position: 2269207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2269539:1
position: 2269539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:2269855-2269963:1:exon

position:2269855:1
position: 2269855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2269963:1
position: 2269963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:2270935-2271107:1:exon

position:2270935:1
position: 2270935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2271107:1
position: 2271107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:2271570-2271806:1:exon

position:2271570:1
position: 2271570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

myh14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: myh14
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: myosin-10
translation: MARPVGGSVSDAERYLYTGSSGSSQGSSASSQADWAARRLVWVPSEKQGFEAASVRAERGEEVEVELADSGRKVTLSKEEVQRMNPPRFSKVEDMAELTCLNEASVLHNLKERYYSGLIYTYSGLFCVVINPYKNLPIYTEPIVEMYRGKKRHEMPPHIYAISEAAYRSMLQDREDQAILCTGESGAGKTENTKKVIQYLAHVASSHKSASAGPAHSQLEPPRPTSQQNTAVLYGELERQLLQANPILESFGNAKTVKNDNSSRFGKFIRINFDVAGYIVGANIETYLLEKSRAIRQAKDERTFHIFYQLLSGAPDHMRGDLLLEGFDSYRFLSCGFVPIPGQTDKENFQETLESMKIMGFNQDEVVAMMKLISAVLQFGNISFKKERNTDQASMPDNTAAQKLCHLMGINVTEFCRAILTPKIKVGRDFVQKAQTKEQADFAIEALAKATYERLFRWLVHRINRALDRTKRQGASFIGILDIAGFEIFQLNSFEQLCINYTNTNNHTMFILEQEEYQREGIEWSFIDFGLDLHPCIEWCERQTNPPGVLALLDEECWFPKATDKTFIEKLSSEQGTHPKFQRPRQLKDQADFCILHYAGKVDYKADEWLMKNMDPLNDSVASLLHQSTDRFVAELWKDVERIVGLEQVQAGGMNDVSFGSGFKTKKGMFRTVGQLYKESLSKLMATLRNTNPNFVRCIIPNHEKRAGKLEPHLVLDQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILTPNAIPKGFMDGKQACVLMIDALELDRNLFRVGQSKIFFRAGVLAHLEEERDLKITDIIIHFQSAARGYLGRRAFVKKQQQLNALKVMQRNCAAYLKLRHWQWWRLFTKVKPLLQVTRQDEEIQHREVELQKVKDRQVKAEMAFFDLEKKHQQMMEEKAILAEQLHAETELFAEAEEMRARLTSRKQELEEILTDLESRLEEEEERNGSLINEKKKMQQHLQDLEEQLEEEEAARQKLQLERVTLEGKMKKMEEDLLMVEDHNSKLSKERKMMEERINEMASKLGEDEERVKTLSKMKNKHEAIIADMEERLKKEEQARQEMEKSRRRLDGESSELQDQLSEMVSLGEELKSQLSRKEEEMLAVTSRLEEESSRRAEALRSLREAQSHLSELQEDVDSERAARVKAEKQKRDLSEELEALRTELEDTLDTTAAQQELRSKRDQELGELKRSLEEESRAHESQITDLRQRHTVAMEGVQEQLEQARRLKASLEKAKQTLEMERAELVSEVRALQSGRAESDHKRKRVETQLQEVQARLGESERVRAELGEKTQKLQAELDSLSGSLGSSESKSFKLSKELSSLEMQLHDAQELLQDETRQKLSLGVRVRALEDERVGLIEKLEEEEEQKRNISRQMLTLQQQLSEVRKKTEEDCGMLEVGEEARRKLQRELEAMSQRCNEKSQALEKLEREESSRLWRSWNAVEGIRRLKQTKRHLEKKQKKFDQLLADEKSISARYAEERDRAEAECREKETRALALARALDEALESRDEMERTNKLLRAEMDQLVSSKDDVGKNVHELERARRALEQQAQEMKTQLEELEDELQSAEDGKLRLEVNMQALRAQCERELAGKEESGEEKRRALMKQVREMELELEEERKQRAQAVAGKKKLEIDLQDIEAQIEAANRGRDEALKQLKRLQAQMKDLIRELDEARLARDEIASQSKDSEKRLKGLEAELLQLTEELSAAERAKRQAQQERDEILDDITNNTSGKSAFLDEKRRLEARIVQLEEELEEEQGNVELLNERYRKSTLQEETLSLQLSGERSLAQKNEAARQQLERQNKELKGKLSELEGDVRSKYKLSIAALEAKINQLEEQLELERQERMIANKLVRRTEKKFKEVVLQVEDERRHADQFKDQMDKTSVRMRQLKRQLEEAEEEASRANTYRRKLQRELEDVSENAETMNREVNVLRTKLSQSERRRDK
SIO_010081: myh14
subclass of: SO_0000673
so part of: myh14
location: join(2246276..2246428,2247031..2247237,2248976..2249132,2250604..2250631,2250811..2250919,2251088..2251117,2251490..2251507,2251769..2251861,2252527..2252590,2253628..2253726,2253911..2254048,2254211..2254217,2254461..2254556,2254726..2254844,2255065..2255217,2255462..2255593,2255680..2255703,2255858..2256035,2256494..2256608,2258619..2258818,2258937..2259058,2259328..2259397,2259499..2259659,2260002..2260110,2260343..2260474,2261075..2261281,2261390..2261527,2261713..2261836,2261968..2262139,2262649..2262861,2263010..2263154,2263408..2263614,2263965..2264069,2264349..2264501,2264638..2264824,2264900..2264961,2265826..2266038,2266739..2266951,2267287..2267448,2267678..2267806,2268393..2268481,2269207..2269539,2269855..2269963,2270935..2271107,2271570..2271597)
location: region:2246276-2271597:1
so has part: feature:2246276-2246428:1:exon
so has part: feature:2247031-2247237:1:exon
so has part: feature:2248976-2249132:1:exon
so has part: feature:2250604-2250631:1:exon
so has part: feature:2250811-2250919:1:exon
so has part: feature:2251088-2251117:1:exon
so has part: feature:2251490-2251507:1:exon
so has part: feature:2251769-2251861:1:exon
so has part: feature:2252527-2252590:1:exon
so has part: feature:2253628-2253726:1:exon
so has part: feature:2253911-2254048:1:exon
so has part: feature:2254211-2254217:1:exon
so has part: feature:2254461-2254556:1:exon
so has part: feature:2254726-2254844:1:exon
so has part: feature:2255065-2255217:1:exon
so has part: feature:2255462-2255593:1:exon
so has part: feature:2255680-2255703:1:exon
so has part: feature:2255858-2256035:1:exon
so has part: feature:2256494-2256608:1:exon
so has part: feature:2258619-2258818:1:exon
so has part: feature:2258937-2259058:1:exon
so has part: feature:2259328-2259397:1:exon
so has part: feature:2259499-2259659:1:exon
so has part: feature:2260002-2260110:1:exon
so has part: feature:2260343-2260474:1:exon
so has part: feature:2261075-2261281:1:exon
so has part: feature:2261390-2261527:1:exon
so has part: feature:2261713-2261836:1:exon
so has part: feature:2261968-2262139:1:exon
so has part: feature:2262649-2262861:1:exon
so has part: feature:2263010-2263154:1:exon
so has part: feature:2263408-2263614:1:exon
so has part: feature:2263965-2264069:1:exon
so has part: feature:2264349-2264501:1:exon
so has part: feature:2264638-2264824:1:exon
so has part: feature:2264900-2264961:1:exon
so has part: feature:2265826-2266038:1:exon
so has part: feature:2266739-2266951:1:exon
so has part: feature:2267287-2267448:1:exon
so has part: feature:2267678-2267806:1:exon
so has part: feature:2268393-2268481:1:exon
so has part: feature:2269207-2269539:1:exon
so has part: feature:2269855-2269963:1:exon
so has part: feature:2270935-2271107:1:exon
so has part: feature:2271570-2271597:1:exon

XP_034769377.1
type: Protein
SIO_000068: ncbiprotein

position:2246276:1
position: 2246276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2271597:1
position: 2271597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2246276-2246428:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2247031-2247237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2248976-2249132:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2250604-2250631:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2250811-2250919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2251088-2251117:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2251490-2251507:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2251769-2251861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2252527-2252590:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2253628-2253726:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2253911-2254048:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2254211-2254217:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2254461-2254556:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2254726-2254844:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2255065-2255217:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2255462-2255593:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2255680-2255703:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2255858-2256035:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2256494-2256608:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2258619-2258818:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2258937-2259058:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2259328-2259397:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2259499-2259659:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2260002-2260110:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2260343-2260474:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2261075-2261281:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2261390-2261527:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2261713-2261836:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2261968-2262139:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2262649-2262861:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2263010-2263154:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2263408-2263614:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2263965-2264069:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2264349-2264501:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2264638-2264824:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2264900-2264961:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2265826-2266038:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2266739-2266951:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2267287-2267448:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2267678-2267806:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2268393-2268481:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2269207-2269539:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2269855-2269963:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2270935-2271107:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2271570-2271597:1:exon

LOC117409983
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117409983
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2296569..2297642
location: region:2296569-2297642:1
so has part: feature:2296569-2297642:1:exon
subclass of: SO_0000010

117409983
type: Gene
SIO_000068: ncbigene

position:2296569:1
position: 2296569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2297642:1
position: 2297642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2296569-2297642:1:exon

LOC117409983
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117409983
product: urotensin-2 receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
transcript id: XM_034016308.2
SIO_010081: LOC117409983
subclass of: SO_0000673
so part of: LOC117409983
location: 2296569..2297642
location: region:2296569-2297642:1
so has part: feature:2296569-2297642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2296569-2297642:1:exon

LOC117409983
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117409983
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: urotensin-2 receptor
translation: MIVTAVIGTLLSLMCAIGLAGNLYTLAVVRRGHGRSSSSLYVHVLNLALADLLYLCTAPFIVYDSFAPDWVFGEAGCRVLLTLDLLTMHSSIFILTIMSSERYAAIARPLAAAGRSRGYRKVVAPLVWVLSLGLTSPMMAMVHLEERLMEDGSLRRLCSPTWSEEDYKIYLTVLFTTSILAPGVIIGFLYGGLARIYWRSQTKGNVGQGQSRPPKHKVLYMIFAIVLAFWACFLPFWVWQLLPLYRPEALRFLPVRTEIYINHLVTCLTYGNSCVNPFLYTLLTKNYKEYRKGNAGSHHKGAVVVMLASYPCKRGTGLSEAGVGEAGRAGSGKILAPSSATAMETVIRSSGHLQGAV
SIO_010081: LOC117409983
subclass of: SO_0000673
so part of: LOC117409983
location: 2296569..2297642
location: region:2296569-2297642:1
so has part: feature:2296569-2297642:1:exon

XP_033872199.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2296569-2297642:1:exon

kcnj14
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: kcnj14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2303941..2307130)
location: region:2303941-2307130:-1
so has part: feature:2303941-2307130:-1:exon
subclass of: SO_0000010

117409984
type: Gene
SIO_000068: ncbigene

position:2303941:-1
position: 2303941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2307130:-1
position: 2307130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2303941-2307130:-1:exon

kcnj14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: kcnj14
product: potassium inwardly rectifying channel subfamily J member 14
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034016309.2
SIO_010081: kcnj14
subclass of: SO_0000673
so part of: kcnj14
location: complement(join(2303941..2304259,2305139..2305456,2306172..2307130))
location: region:2303941-2307130:-1
so has part: feature:2306172-2307130:-1:exon
so has part: feature:2305139-2305456:-1:exon
so has part: feature:2303941-2304259:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2306172-2307130:-1:exon

position:2306172:-1
position: 2306172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2305139-2305456:-1:exon

position:2305139:-1
position: 2305139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2305456:-1
position: 2305456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2303941-2304259:-1:exon

position:2304259:-1
position: 2304259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

kcnj14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: kcnj14
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ATP-sensitive inward rectifier potassium channel 14
translation: MAAARVKRRFSVVVDTPLDEEEVMKLAQSSGEAGEGGACTHASLPSRNGKAFSQGNGDCSPSGSSPDHRRQQRARNRFVRKDGQCNITFVNVSERGQRYLTDLFTTCVDIRWRWMFVLFSLSFLLSWLLFGFTFWLIASGHGDFGPRPAPPGAPEPCFLQVTTFTAAFLFSLETQTSIGYGFRSVTEACPLAVLAVVLQCIVGSIIDAFIIGAVMVKIAKPKKRNETLVFSENAVVALRDGKLCMMWRVGNLRTSHLVEAHVRAQLLKPRVTPEGEYLPLDHEDMNVGFDNGTDRIFLVSPVTIVHEIDEDSPLYELSQAELEQEADFEVVVILEGMVEATAMTTQCRSSYLSHEILWGHRFEPVLFDKKNHYQVDYSYFHRTYKVPSIPSCSAKDLAEQKYIQTSRASFCYENEVALMDHSELELELVTPNPRAVDPHLTQTSTAEASPQLDFMSC
SIO_010081: kcnj14
subclass of: SO_0000673
so part of: kcnj14
location: complement(join(2304008..2304259,2305139..2305456,2306172..2306976))
location: region:2304008-2306976:-1
so has part: feature:2306172-2306976:-1:exon
so has part: feature:2305139-2305456:-1:exon
so has part: feature:2304008-2304259:-1:exon

XP_033872200.2
type: Protein
SIO_000068: ncbiprotein

position:2304008:-1
position: 2304008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2306976:-1
position: 2306976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2306172-2306976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2305139-2305456:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2304008-2304259:-1:exon

si:dkey-283b15.4
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: si:dkey-283b15.4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2312850..2326124
location: region:2312850-2326124:1
so has part: feature:2312850-2326124:1:exon
subclass of: SO_0000010

117410125
type: Gene
SIO_000068: ncbigene

position:2312850:1
position: 2312850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2326124:1
position: 2326124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2312850-2326124:1:exon

si:dkey-283b15.4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: si:dkey-283b15.4
product: cytohesin-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034016552.2
SIO_010081: si:dkey-283b15.4
subclass of: SO_0000673
so part of: si:dkey-283b15.4
location: join(2312850..2312999,2314327..2314477,2314694..2314760,2316540..2316658,2317331..2317411,2319011..2319123,2319244..2319392,2319505..2319616,2321746..2321822,2322823..2322894,2323477..2323631,2324378..2326124)
location: region:2312850-2326124:1
so has part: feature:2312850-2312999:1:exon
so has part: feature:2314327-2314477:1:exon
so has part: feature:2314694-2314760:1:exon
so has part: feature:2316540-2316658:1:exon
so has part: feature:2317331-2317411:1:exon
so has part: feature:2319011-2319123:1:exon
so has part: feature:2319244-2319392:1:exon
so has part: feature:2319505-2319616:1:exon
so has part: feature:2321746-2321822:1:exon
so has part: feature:2322823-2322894:1:exon
so has part: feature:2323477-2323631:1:exon
so has part: feature:2324378-2326124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2312850-2312999:1:exon

position:2312999:1
position: 2312999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2314327-2314477:1:exon

position:2314327:1
position: 2314327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2314477:1
position: 2314477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2314694-2314760:1:exon

position:2314694:1
position: 2314694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2314760:1
position: 2314760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2316540-2316658:1:exon

position:2316540:1
position: 2316540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2316658:1
position: 2316658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2317331-2317411:1:exon

position:2317331:1
position: 2317331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2317411:1
position: 2317411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2319011-2319123:1:exon

position:2319011:1
position: 2319011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2319123:1
position: 2319123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2319244-2319392:1:exon

position:2319244:1
position: 2319244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2319392:1
position: 2319392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2319505-2319616:1:exon

position:2319505:1
position: 2319505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2319616:1
position: 2319616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2321746-2321822:1:exon

position:2321746:1
position: 2321746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2321822:1
position: 2321822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2322823-2322894:1:exon

position:2322823:1
position: 2322823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2322894:1
position: 2322894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2323477-2323631:1:exon

position:2323477:1
position: 2323477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2323631:1
position: 2323631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2324378-2326124:1:exon

position:2324378:1
position: 2324378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:dkey-283b15.4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: si:dkey-283b15.4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytohesin-2
translation: MEDLDFIPGDLSSEERLELEEIRRRKGVLLLEIQRLKDELREAMMEVEGLESNTEGSKTLQKSRHVAMGRKKFNMDPKKGIQFLVENELLCHTAEEIAQFLYKGEGLNKTAIGDYLGERDDFNIRVLHAFVDLHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCHCNPGVFQSTDTCYVLSFAIIMLNTSLHNPNVRDKPGVERFISMNRGINEGGDLPEELLRNLYDSIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFELYIPNNRGQLIKACKTEADGRVVEGNHNVYRISAPTQEEKDEWIKNIKSAVSVDPFYEMLAARKKRISLKKKEEQA
SIO_010081: si:dkey-283b15.4
subclass of: SO_0000673
so part of: si:dkey-283b15.4
location: join(2312981..2312999,2314327..2314477,2314694..2314760,2316540..2316658,2317331..2317411,2319011..2319123,2319244..2319392,2319505..2319616,2321746..2321822,2322823..2322894,2323477..2323631,2324378..2324465)
location: region:2312981-2324465:1
so has part: feature:2312981-2312999:1:exon
so has part: feature:2314327-2314477:1:exon
so has part: feature:2314694-2314760:1:exon
so has part: feature:2316540-2316658:1:exon
so has part: feature:2317331-2317411:1:exon
so has part: feature:2319011-2319123:1:exon
so has part: feature:2319244-2319392:1:exon
so has part: feature:2319505-2319616:1:exon
so has part: feature:2321746-2321822:1:exon
so has part: feature:2322823-2322894:1:exon
so has part: feature:2323477-2323631:1:exon
so has part: feature:2324378-2324465:1:exon

XP_033872443.1
type: Protein
SIO_000068: ncbiprotein

position:2312981:1
position: 2312981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2324465:1
position: 2324465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2312981-2312999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2314327-2314477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2314694-2314760:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2316540-2316658:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2317331-2317411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2319011-2319123:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2319244-2319392:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2319505-2319616:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2321746-2321822:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2322823-2322894:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2323477-2323631:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2324378-2324465:1:exon

LOC117410089
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2329411..2335964
location: region:2329411-2335964:1
so has part: feature:2329411-2335964:1:exon
subclass of: SO_0000010

117410089
type: Gene
SIO_000068: ncbigene

position:2329411:1
position: 2329411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2335964:1
position: 2335964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2329411-2335964:1:exon

LOC117410089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410089
product: neuronal pentraxin-1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034016484.2
SIO_010081: LOC117410089
subclass of: SO_0000673
so part of: LOC117410089
location: join(2329411..2330378,2331383..2331860,2332320..2332576,2333910..2334089,2334938..2335964)
location: region:2329411-2335964:1
so has part: feature:2329411-2330378:1:exon
so has part: feature:2331383-2331860:1:exon
so has part: feature:2332320-2332576:1:exon
so has part: feature:2333910-2334089:1:exon
so has part: feature:2334938-2335964:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2329411-2330378:1:exon

position:2330378:1
position: 2330378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2331383-2331860:1:exon

position:2331383:1
position: 2331383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2331860:1
position: 2331860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2332320-2332576:1:exon

position:2332320:1
position: 2332320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2332576:1
position: 2332576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2333910-2334089:1:exon

position:2333910:1
position: 2333910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2334089:1
position: 2334089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2334938-2335964:1:exon

position:2334938:1
position: 2334938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117410089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal pentraxin-1
translation: MKKTSSGNPIPFPSRMSPLSRMLLLLLGFSSWILLDVSAEHGPPLPKFVCTPMPVDSEPGCSGNGRHSQPMTTGSSNALWGLTDDAKATILHLRETIVQQKETILDQRETIRELTAKLTLCEGFGTHSTGHHDEDDDDDDDEDSDSHHSNALGHSSRPHRLPEPHPLHGVPQPHHKETHGSKNTMGDPPKHAVSVDQMGRMLQSLKERIDNLQHSRNTSTSYSHSLRDLLQRRIAALEQQIQHRLHSGGEEEEEEEEEGGDHHHHSEDEDDDHHNQHENDTAHGHHDDGHHDDGHHDNGHHDDGHHDNGHHDDGHHDDGHHHDDGHHDNGHHGNHVPHHRRGVKSRDNHGRASHGHKLDAVMSHLPHRNSDKAAASHKKVKSPDDFQIGFPMRTNYMYGRVKRTLLQEIFAMTLCLWLKSNSSPGVGTPFSYSVPGQANELVLIEWGNNPMELLVNDKAVTLPLSINDAKWHHVCVTWSTRDGLWESYQDGIKRGTGENLAAWHPIKAGGVFILGQEQDTLGGRFDATQAFVGEMSDVNMWSHVLTPNEIYNLATCGSHATGDVIAWTESSVELHGGVTKYPFDPCH
SIO_010081: LOC117410089
subclass of: SO_0000673
so part of: LOC117410089
location: join(2329740..2330378,2331383..2331860,2332320..2332576,2333910..2334089,2334938..2335147)
location: region:2329740-2335147:1
so has part: feature:2329740-2330378:1:exon
so has part: feature:2331383-2331860:1:exon
so has part: feature:2332320-2332576:1:exon
so has part: feature:2333910-2334089:1:exon
so has part: feature:2334938-2335147:1:exon

XP_033872375.2
type: Protein
SIO_000068: ncbiprotein

position:2329740:1
position: 2329740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2335147:1
position: 2335147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2329740-2330378:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2331383-2331860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2332320-2332576:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2333910-2334089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2334938-2335147:1:exon

LOC117410157
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2337722..2342508
location: region:2337722-2342508:1
so has part: feature:2337722-2342508:1:exon
subclass of: SO_0000010

117410157
type: Gene
SIO_000068: ncbigene

position:2337722:1
position: 2337722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2342508:1
position: 2342508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2337722-2342508:1:exon

LOC117410157
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410157
product: uncharacterized LOC117410157, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034913473.1
SIO_010081: LOC117410157
subclass of: SO_0000673
so part of: LOC117410157
location: join(2337722..2337811,2338550..2338585,2339124..2339387,2340147..2340215,2340549..2340662,2341096..2341186,2341985..2341992,2342030..2342131,2342376..2342508)
location: region:2337722-2342508:1
so has part: feature:2337722-2337811:1:exon
so has part: feature:2338550-2338585:1:exon
so has part: feature:2339124-2339387:1:exon
so has part: feature:2340147-2340215:1:exon
so has part: feature:2340549-2340662:1:exon
so has part: feature:2341096-2341186:1:exon
so has part: feature:2341985-2341992:1:exon
so has part: feature:2342030-2342131:1:exon
so has part: feature:2342376-2342508:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2337722-2337811:1:exon

position:2337811:1
position: 2337811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2338550-2338585:1:exon

position:2338550:1
position: 2338550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2338585:1
position: 2338585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2339124-2339387:1:exon

position:2339124:1
position: 2339124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2339387:1
position: 2339387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2340147-2340215:1:exon

position:2340147:1
position: 2340147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2340215:1
position: 2340215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2340549-2340662:1:exon

position:2340549:1
position: 2340549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2340662:1
position: 2340662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2341096-2341186:1:exon

position:2341096:1
position: 2341096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2341186:1
position: 2341186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2341985-2341992:1:exon

position:2341985:1
position: 2341985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2341992:1
position: 2341992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2342030-2342131:1:exon

position:2342030:1
position: 2342030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2342131:1
position: 2342131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2342376-2342508:1:exon

position:2342376:1
position: 2342376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117410157
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410157
product: uncharacterized LOC117410157, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034913474.1
SIO_010081: LOC117410157
subclass of: SO_0000673
so part of: LOC117410157
location: join(2337722..2337811,2338550..2338585,2339124..2339387,2340147..2340215,2340549..2340656,2341096..2341186,2341985..2341992,2342030..2342131,2342376..2342508)
location: region:2337722-2342508:1
so has part: feature:2337722-2337811:1:exon
so has part: feature:2338550-2338585:1:exon
so has part: feature:2339124-2339387:1:exon
so has part: feature:2340147-2340215:1:exon
so has part: feature:2340549-2340656:1:exon
so has part: feature:2341096-2341186:1:exon
so has part: feature:2341985-2341992:1:exon
so has part: feature:2342030-2342131:1:exon
so has part: feature:2342376-2342508:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2337722-2337811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2338550-2338585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2339124-2339387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2340147-2340215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2340549-2340656:1:exon

position:2340656:1
position: 2340656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2341096-2341186:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2341985-2341992:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2342030-2342131:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2342376-2342508:1:exon

LOC117410157
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410157
product: uncharacterized LOC117410157, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034913475.1
SIO_010081: LOC117410157
subclass of: SO_0000673
so part of: LOC117410157
location: join(2337722..2337811,2338550..2338585,2339124..2339171,2339211..2339387,2340147..2340215,2340549..2340662,2341096..2341186,2341985..2341992,2342030..2342131,2342376..2342508)
location: region:2337722-2342508:1
so has part: feature:2337722-2337811:1:exon
so has part: feature:2338550-2338585:1:exon
so has part: feature:2339124-2339171:1:exon
so has part: feature:2339211-2339387:1:exon
so has part: feature:2340147-2340215:1:exon
so has part: feature:2340549-2340662:1:exon
so has part: feature:2341096-2341186:1:exon
so has part: feature:2341985-2341992:1:exon
so has part: feature:2342030-2342131:1:exon
so has part: feature:2342376-2342508:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2337722-2337811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2338550-2338585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2339124-2339171:1:exon

position:2339171:1
position: 2339171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2339211-2339387:1:exon

position:2339211:1
position: 2339211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2340147-2340215:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2340549-2340662:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2341096-2341186:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2341985-2341992:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2342030-2342131:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2342376-2342508:1:exon

LOC117410157
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117410157 isoform X1
translation: MRAAPLFTVILLTAGVTSEKAQEQPPRLSLADAGRITEGDAFTLRCEVRGEGWKFLWIKVSEGGEMFDSGTGGNYTVRSAALVNSGQYWCFAGRNDGMYYVSNGLSVQVTVPSTTPLTTASSTAKTTAEKTDLAQASRSTRTPTPSNSERKTAVPAANTDQGKPHGSSLCTMSNTGLPVTARRAENTMLGSADQTDPDKQAESVFLQPWFLITAVLCSVLLVVSVILVLVYQPDQRYTVGHTTTFRRRGVQLIRYMEQEEPPAGDTAMGE
SIO_010081: LOC117410157
subclass of: SO_0000673
so part of: LOC117410157
location: join(2337781..2337811,2338550..2338585,2339124..2339387,2340147..2340215,2340549..2340662,2341096..2341186,2341985..2341992,2342030..2342131,2342376..2342473)
location: region:2337781-2342473:1
so has part: feature:2337781-2337811:1:exon
so has part: feature:2338550-2338585:1:exon
so has part: feature:2339124-2339387:1:exon
so has part: feature:2340147-2340215:1:exon
so has part: feature:2340549-2340662:1:exon
so has part: feature:2341096-2341186:1:exon
so has part: feature:2341985-2341992:1:exon
so has part: feature:2342030-2342131:1:exon
so has part: feature:2342376-2342473:1:exon

XP_034769364.1
type: Protein
SIO_000068: ncbiprotein

position:2337781:1
position: 2337781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2342473:1
position: 2342473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2337781-2337811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2338550-2338585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2339124-2339387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2340147-2340215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2340549-2340662:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2341096-2341186:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2341985-2341992:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2342030-2342131:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2342376-2342473:1:exon

LOC117410157
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117410157 isoform X2
translation: MRAAPLFTVILLTAGVTSEKAQEQPPRLSLADAGRITEGDAFTLRCEVRGEGWKFLWIKVSEGGEMFDSGTGGNYTVRSAALVNSGQYWCFAGRNDGMYYVSNGLSVQVTVPSTTPLTTASSTAKTTAEKTDLAQASRSTRTPTPSNSERKTAVPAANTDQGKPHGSSLLSNTGLPVTARRAENTMLGSADQTDPDKQAESVFLQPWFLITAVLCSVLLVVSVILVLVYQPDQRYTVGHTTTFRRRGVQLIRYMEQEEPPAGDTAMGE
SIO_010081: LOC117410157
subclass of: SO_0000673
so part of: LOC117410157
location: join(2337781..2337811,2338550..2338585,2339124..2339387,2340147..2340215,2340549..2340656,2341096..2341186,2341985..2341992,2342030..2342131,2342376..2342473)
location: region:2337781-2342473:1
so has part: feature:2337781-2337811:1:exon
so has part: feature:2338550-2338585:1:exon
so has part: feature:2339124-2339387:1:exon
so has part: feature:2340147-2340215:1:exon
so has part: feature:2340549-2340656:1:exon
so has part: feature:2341096-2341186:1:exon
so has part: feature:2341985-2341992:1:exon
so has part: feature:2342030-2342131:1:exon
so has part: feature:2342376-2342473:1:exon

XP_034769365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2337781-2337811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2338550-2338585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2339124-2339387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2340147-2340215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2340549-2340656:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2341096-2341186:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2341985-2341992:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2342030-2342131:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2342376-2342473:1:exon

LOC117410157
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117410157 isoform X3
translation: MRAAPLFTVILLTAGVTSEKAQEQPPRLSLADAGRITEGWKFLWIKVSEGGEMFDSGTGGNYTVRSAALVNSGQYWCFAGRNDGMYYVSNGLSVQVTVPSTTPLTTASSTAKTTAEKTDLAQASRSTRTPTPSNSERKTAVPAANTDQGKPHGSSLCTMSNTGLPVTARRAENTMLGSADQTDPDKQAESVFLQPWFLITAVLCSVLLVVSVILVLVYQPDQRYTVGHTTTFRRRGVQLIRYMEQEEPPAGDTAMGE
SIO_010081: LOC117410157
subclass of: SO_0000673
so part of: LOC117410157
location: join(2337781..2337811,2338550..2338585,2339124..2339171,2339211..2339387,2340147..2340215,2340549..2340662,2341096..2341186,2341985..2341992,2342030..2342131,2342376..2342473)
location: region:2337781-2342473:1
so has part: feature:2337781-2337811:1:exon
so has part: feature:2338550-2338585:1:exon
so has part: feature:2339124-2339171:1:exon
so has part: feature:2339211-2339387:1:exon
so has part: feature:2340147-2340215:1:exon
so has part: feature:2340549-2340662:1:exon
so has part: feature:2341096-2341186:1:exon
so has part: feature:2341985-2341992:1:exon
so has part: feature:2342030-2342131:1:exon
so has part: feature:2342376-2342473:1:exon

XP_034769366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2337781-2337811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2338550-2338585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2339124-2339171:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2339211-2339387:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2340147-2340215:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2340549-2340662:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2341096-2341186:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2341985-2341992:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2342030-2342131:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2342376-2342473:1:exon

LOC117966792
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966792
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2343793..2348653
location: region:2343793-2348653:1
so has part: feature:2343793-2348653:1:exon
subclass of: SO_0000010

117966792
type: Gene
SIO_000068: ncbigene

position:2343793:1
position: 2343793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2348653:1
position: 2348653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2343793-2348653:1:exon

LOC117966792
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966792
product: brain-specific angiogenesis inhibitor 1-associated protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034913481.1
SIO_010081: LOC117966792
subclass of: SO_0000673
so part of: LOC117966792
location: join(2343793..2344617,2345571..2345646,2345841..2345927,2347196..2347257,2347915..2347986,2348308..2348653)
location: region:2343793-2348653:1
so has part: feature:2343793-2344617:1:exon
so has part: feature:2345571-2345646:1:exon
so has part: feature:2345841-2345927:1:exon
so has part: feature:2347196-2347257:1:exon
so has part: feature:2347915-2347986:1:exon
so has part: feature:2348308-2348653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2343793-2344617:1:exon

position:2344617:1
position: 2344617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2345571-2345646:1:exon

position:2345571:1
position: 2345571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2345646:1
position: 2345646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2345841-2345927:1:exon

position:2345841:1
position: 2345841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2345927:1
position: 2345927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2347196-2347257:1:exon

position:2347196:1
position: 2347196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2347257:1
position: 2347257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2347915-2347986:1:exon

position:2347915:1
position: 2347915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2347986:1
position: 2347986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2348308-2348653:1:exon

position:2348308:1
position: 2348308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117966792
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966792
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brain-specific angiogenesis inhibitor 1-associated protein 2-like
translation: MSRSDEVNKMTENVYKVILEQFNPGLKNFVIMGKNYEKALTGVSLAAKGYFDALVKLGELASDSQGSKELGDTLFQMAEVHRQIQVQLEEVLKLFHSELLSQLEQKLELDLKYLTATLKKYQGERRSKSDSIEHCQSELKKLRRKSQGSRHPQKYGDREMQVTPKICVSASS
SIO_010081: LOC117966792
subclass of: SO_0000673
so part of: LOC117966792
location: join(2344570..2344617,2345571..2345646,2345841..2345927,2347196..2347257,2347915..2347986,2348308..2348481)
location: region:2344570-2348481:1
so has part: feature:2344570-2344617:1:exon
so has part: feature:2345571-2345646:1:exon
so has part: feature:2345841-2345927:1:exon
so has part: feature:2347196-2347257:1:exon
so has part: feature:2347915-2347986:1:exon
so has part: feature:2348308-2348481:1:exon

XP_034769372.1
type: Protein
SIO_000068: ncbiprotein

position:2344570:1
position: 2344570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2348481:1
position: 2348481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2344570-2344617:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2345571-2345646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2345841-2345927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2347196-2347257:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2347915-2347986:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2348308-2348481:1:exon

LOC117409985
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117409985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2381643..2394302
location: region:2381643-2394302:1
so has part: feature:2381643-2394302:1:exon
subclass of: SO_0000010

117409985
type: Gene
SIO_000068: ncbigene

position:2381643:1
position: 2381643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2394302:1
position: 2394302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2381643-2394302:1:exon

LOC117409985
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117409985
product: butyrophilin subfamily 2 member A2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034913384.1
SIO_010081: LOC117409985
subclass of: SO_0000673
so part of: LOC117409985
location: join(2381643..2381652,2382619..2382963,2383470..2383754,2384370..2384489,2385363..2385389,2385627..2385662,2385767..2385793,2386260..2386286,2386549..2386575,2386679..2387629,2394244..2394302)
location: region:2381643-2394302:1
so has part: feature:2381643-2381652:1:exon
so has part: feature:2382619-2382963:1:exon
so has part: feature:2383470-2383754:1:exon
so has part: feature:2384370-2384489:1:exon
so has part: feature:2385363-2385389:1:exon
so has part: feature:2385627-2385662:1:exon
so has part: feature:2385767-2385793:1:exon
so has part: feature:2386260-2386286:1:exon
so has part: feature:2386549-2386575:1:exon
so has part: feature:2386679-2387629:1:exon
so has part: feature:2394244-2394302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2381643-2381652:1:exon

position:2381652:1
position: 2381652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2382619-2382963:1:exon

position:2382619:1
position: 2382619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2382963:1
position: 2382963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2383470-2383754:1:exon

position:2383470:1
position: 2383470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2383754:1
position: 2383754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2384370-2384489:1:exon

position:2384370:1
position: 2384370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2384489:1
position: 2384489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2385363-2385389:1:exon

position:2385363:1
position: 2385363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2385389:1
position: 2385389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2385627-2385662:1:exon

position:2385627:1
position: 2385627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2385662:1
position: 2385662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2385767-2385793:1:exon

position:2385767:1
position: 2385767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2385793:1
position: 2385793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2386260-2386286:1:exon

position:2386260:1
position: 2386260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2386286:1
position: 2386286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2386549-2386575:1:exon

position:2386549:1
position: 2386549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2386575:1
position: 2386575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2386679-2387629:1:exon

position:2386679:1
position: 2386679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2387629:1
position: 2387629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2394244-2394302:1:exon

position:2394244:1
position: 2394244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117409985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117409985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 2 member A2-like
translation: MVLPFNVIVPKSPVISTVGEDSVLPCQVSTEIKTEDLEVRWYRERFNDPIYEYKDGKELTEKQNKEYQGRTNLLDQQLGDGVLSIVLRKVRVSDEGKYTCYAGTSKWYEEPKMELQVQALGSDPVIHIEKHLKRIITLSCVSLGWYPQPEMYWTDGAGRNVTALTQPSIQRDGNGLYNISSQLSVKQNDNVVVSCLVIQKRQRREMKSRLQISEQFFEITHPERLYISAFVISASIVLVCIMAACLYVFKRKREWDKTCVEFGNLQKAEKDTSIKCERLEQELNAVKTIPNSVWKWIQEAAVNVILDADTANKRLILSVDGTSMALGEEDRDPPDTGRRFERPLCVLSREGFTSKHYWEVEVGKKTGWIVGAATESAKRNGQVILFPEQGFWVLRLENEKFYANDVIESPTILPLSLKPQILGVYLDYEERQLSFYNVETRSHIYTFTDMELNTKEKVYPLAGTTPSCKEGLDIHHFTHLKTKKSTSPMSQADDASARAALTGEEDTKDRYSKEDHPLLPDKKRLPGQDSKKMFGFWPGLWLEKKEKKKKEGNEKREEETEKAKKENEEKEVNEKREEEIEKGKEENKEKEKGKEENKEKENVPDEEKDLPEEESEKRDPTADESEETSRRKKRFLR
SIO_010081: LOC117409985
subclass of: SO_0000673
so part of: LOC117409985
location: join(2381643..2381652,2382619..2382963,2383470..2383754,2384370..2384489,2385363..2385389,2385627..2385662,2385767..2385793,2386260..2386286,2386549..2386575,2386679..2387629,2394244..2394302)
location: region:2381643-2394302:1
so has part: feature:2381643-2381652:1:exon
so has part: feature:2382619-2382963:1:exon
so has part: feature:2383470-2383754:1:exon
so has part: feature:2384370-2384489:1:exon
so has part: feature:2385363-2385389:1:exon
so has part: feature:2385627-2385662:1:exon
so has part: feature:2385767-2385793:1:exon
so has part: feature:2386260-2386286:1:exon
so has part: feature:2386549-2386575:1:exon
so has part: feature:2386679-2387629:1:exon
so has part: feature:2394244-2394302:1:exon

XP_034769275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2381643-2381652:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2382619-2382963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2383470-2383754:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2384370-2384489:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2385363-2385389:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2385627-2385662:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2385767-2385793:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2386260-2386286:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2386549-2386575:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2386679-2387629:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2394244-2394302:1:exon

LOC117966794
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966794
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2394045..2409864)
location: region:2394045-2409864:-1
so has part: feature:2394045-2409864:-1:exon
subclass of: SO_0000010

117966794
type: Gene
SIO_000068: ncbigene

position:2394045:-1
position: 2394045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2409864:-1
position: 2409864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2394045-2409864:-1:exon

LOC117966794
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966794
product: astrocytic phosphoprotein PEA-15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034913483.1
SIO_010081: LOC117966794
subclass of: SO_0000673
so part of: LOC117966794
location: complement(join(2394045..2394722,2395332..2395487,2396380..2396554,2409461..2409864))
location: region:2394045-2409864:-1
so has part: feature:2409461-2409864:-1:exon
so has part: feature:2396380-2396554:-1:exon
so has part: feature:2395332-2395487:-1:exon
so has part: feature:2394045-2394722:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2409461-2409864:-1:exon

position:2409461:-1
position: 2409461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2396380-2396554:-1:exon

position:2396380:-1
position: 2396380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2396554:-1
position: 2396554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2395332-2395487:-1:exon

position:2395332:-1
position: 2395332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2395487:-1
position: 2395487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2394045-2394722:-1:exon

position:2394722:-1
position: 2394722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117966794
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966794
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: astrocytic phosphoprotein PEA-15-like
translation: MSEYSSLLTELSENITNEDLEQLKSACKEDIPGDQSENITSSKEWFSYLEKDDKLAQDNLSYIEHIFEISRRPDLLTRVIEYRTTVLKISEDDEIDTKLTRIPSAKKYKDIIRQPSEDEIIKLAPPPKKV
SIO_010081: LOC117966794
subclass of: SO_0000673
so part of: LOC117966794
location: complement(join(2394658..2394722,2395332..2395487,2396380..2396551))
location: region:2394658-2396551:-1
so has part: feature:2396380-2396551:-1:exon
so has part: feature:2395332-2395487:-1:exon
so has part: feature:2394658-2394722:-1:exon

XP_034769374.1
type: Protein
SIO_000068: ncbiprotein

position:2394658:-1
position: 2394658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2396551:-1
position: 2396551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2396380-2396551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2395332-2395487:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2394658-2394722:-1:exon

LOC117966787
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966787
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2413853..2434541
location: region:2413853-2434541:1
so has part: feature:2413853-2434541:1:exon
subclass of: SO_0000010

117966787
type: Gene
SIO_000068: ncbigene

position:2413853:1
position: 2413853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2434541:1
position: 2434541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2413853-2434541:1:exon

LOC117966787
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966787
product: calsequestrin-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034913462.1
SIO_010081: LOC117966787
subclass of: SO_0000673
so part of: LOC117966787
location: join(2413853..2414349,2420386..2420418,2425054..2425147,2426081..2426181,2426710..2426821,2427663..2427736,2427835..2427965,2429075..2429120,2430158..2430212,2430824..2430924,2431980..2432054,2432681..2434541)
location: region:2413853-2434541:1
so has part: feature:2413853-2414349:1:exon
so has part: feature:2420386-2420418:1:exon
so has part: feature:2425054-2425147:1:exon
so has part: feature:2426081-2426181:1:exon
so has part: feature:2426710-2426821:1:exon
so has part: feature:2427663-2427736:1:exon
so has part: feature:2427835-2427965:1:exon
so has part: feature:2429075-2429120:1:exon
so has part: feature:2430158-2430212:1:exon
so has part: feature:2430824-2430924:1:exon
so has part: feature:2431980-2432054:1:exon
so has part: feature:2432681-2434541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2413853-2414349:1:exon

position:2414349:1
position: 2414349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2420386-2420418:1:exon

position:2420386:1
position: 2420386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2420418:1
position: 2420418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2425054-2425147:1:exon

position:2425054:1
position: 2425054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2425147:1
position: 2425147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2426081-2426181:1:exon

position:2426081:1
position: 2426081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2426181:1
position: 2426181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2426710-2426821:1:exon

position:2426710:1
position: 2426710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2426821:1
position: 2426821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2427663-2427736:1:exon

position:2427663:1
position: 2427663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2427736:1
position: 2427736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2427835-2427965:1:exon

position:2427835:1
position: 2427835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2427965:1
position: 2427965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2429075-2429120:1:exon

position:2429075:1
position: 2429075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2429120:1
position: 2429120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2430158-2430212:1:exon

position:2430158:1
position: 2430158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2430212:1
position: 2430212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2430824-2430924:1:exon

position:2430824:1
position: 2430824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2430924:1
position: 2430924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2431980-2432054:1:exon

position:2431980:1
position: 2431980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2432054:1
position: 2432054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2432681-2434541:1:exon

position:2432681:1
position: 2432681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117966787
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966787
product: calsequestrin-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034913463.1
SIO_010081: LOC117966787
subclass of: SO_0000673
so part of: LOC117966787
location: join(2413853..2414349,2425054..2425147,2426081..2426181,2426710..2426821,2427663..2427736,2427835..2427965,2429075..2429120,2430158..2430212,2430824..2430924,2431980..2432054,2432681..2434541)
location: region:2413853-2434541:1
so has part: feature:2413853-2414349:1:exon
so has part: feature:2425054-2425147:1:exon
so has part: feature:2426081-2426181:1:exon
so has part: feature:2426710-2426821:1:exon
so has part: feature:2427663-2427736:1:exon
so has part: feature:2427835-2427965:1:exon
so has part: feature:2429075-2429120:1:exon
so has part: feature:2430158-2430212:1:exon
so has part: feature:2430824-2430924:1:exon
so has part: feature:2431980-2432054:1:exon
so has part: feature:2432681-2434541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2413853-2414349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2425054-2425147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2426081-2426181:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2426710-2426821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2427663-2427736:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2427835-2427965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2429075-2429120:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2430158-2430212:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2430824-2430924:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2431980-2432054:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2432681-2434541:1:exon

LOC117966787
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966787
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calsequestrin-1-like isoform X1
translation: MNLGSLLLAALCLFSCGVGRVCQAEEGLDFPEYDGKDRVHDLNTKNFKAVMKKYDVMVILYHEPVESDRASQKQFQMEELILELLTNRAALTYQLAAQVLDDLEDEDIGFGLVDSEKDAAVAKKLGMDEEDSIYIFTDDEVIEYDGELAADTLVEFILDVIEDPVEFIEGERELRAFENIEDEIKLVGYFKNENSEHYKEYEDAAEEFHPYINFFATFEAKIAKKLDLKMNEVDFYEPFMDEPRVIPGKPYTEDEIVDYIEDHQRPTLRKLEPYNMYETWEDDIDGFHIVAFAEEEDPDGFEFLEILKEVAEDNTDNPDLSIIWVDPDDFPLLVPYWEKTFDIDLSSPQIGVVNVTDADSVWLEMKDDDDLPSAEELEDWIEDVLDGDINTEDDDDDDDDSDEDDSDEDDSDEDDDSDEDDDSDEDDDSDEDSDEDDDEKDDSDEDDDKDDSDEDDSDEDDDSDEDEDDD
SIO_010081: LOC117966787
subclass of: SO_0000673
so part of: LOC117966787
location: join(2414101..2414349,2420386..2420418,2425054..2425147,2426081..2426181,2426710..2426821,2427663..2427736,2427835..2427965,2429075..2429120,2430158..2430212,2430824..2430924,2431980..2432054,2432681..2433022)
location: region:2414101-2433022:1
so has part: feature:2414101-2414349:1:exon
so has part: feature:2420386-2420418:1:exon
so has part: feature:2425054-2425147:1:exon
so has part: feature:2426081-2426181:1:exon
so has part: feature:2426710-2426821:1:exon
so has part: feature:2427663-2427736:1:exon
so has part: feature:2427835-2427965:1:exon
so has part: feature:2429075-2429120:1:exon
so has part: feature:2430158-2430212:1:exon
so has part: feature:2430824-2430924:1:exon
so has part: feature:2431980-2432054:1:exon
so has part: feature:2432681-2433022:1:exon

XP_034769353.1
type: Protein
SIO_000068: ncbiprotein

position:2414101:1
position: 2414101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2433022:1
position: 2433022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2414101-2414349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2420386-2420418:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2425054-2425147:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2426081-2426181:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2426710-2426821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2427663-2427736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2427835-2427965:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2429075-2429120:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2430158-2430212:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2430824-2430924:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2431980-2432054:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2432681-2433022:1:exon

LOC117966787
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966787
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calsequestrin-1-like isoform X2
translation: MNLGSLLLAALCLFSCGVGRVCQAEEGLDFPEYDGKDRVHDLNTKNFKAVMKKYDVMVILYHEPVESDRASQKQFQMEELILELAAQVLDDLEDEDIGFGLVDSEKDAAVAKKLGMDEEDSIYIFTDDEVIEYDGELAADTLVEFILDVIEDPVEFIEGERELRAFENIEDEIKLVGYFKNENSEHYKEYEDAAEEFHPYINFFATFEAKIAKKLDLKMNEVDFYEPFMDEPRVIPGKPYTEDEIVDYIEDHQRPTLRKLEPYNMYETWEDDIDGFHIVAFAEEEDPDGFEFLEILKEVAEDNTDNPDLSIIWVDPDDFPLLVPYWEKTFDIDLSSPQIGVVNVTDADSVWLEMKDDDDLPSAEELEDWIEDVLDGDINTEDDDDDDDDSDEDDSDEDDSDEDDDSDEDDDSDEDDDSDEDSDEDDDEKDDSDEDDDKDDSDEDDSDEDDDSDEDEDDD
SIO_010081: LOC117966787
subclass of: SO_0000673
so part of: LOC117966787
location: join(2414101..2414349,2425054..2425147,2426081..2426181,2426710..2426821,2427663..2427736,2427835..2427965,2429075..2429120,2430158..2430212,2430824..2430924,2431980..2432054,2432681..2433022)
location: region:2414101-2433022:1
so has part: feature:2414101-2414349:1:exon
so has part: feature:2425054-2425147:1:exon
so has part: feature:2426081-2426181:1:exon
so has part: feature:2426710-2426821:1:exon
so has part: feature:2427663-2427736:1:exon
so has part: feature:2427835-2427965:1:exon
so has part: feature:2429075-2429120:1:exon
so has part: feature:2430158-2430212:1:exon
so has part: feature:2430824-2430924:1:exon
so has part: feature:2431980-2432054:1:exon
so has part: feature:2432681-2433022:1:exon

XP_034769354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2414101-2414349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2425054-2425147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2426081-2426181:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2426710-2426821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2427663-2427736:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2427835-2427965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2429075-2429120:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2430158-2430212:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2430824-2430924:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2431980-2432054:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2432681-2433022:1:exon

LOC117410108
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2435864..2440647)
location: region:2435864-2440647:-1
so has part: feature:2435864-2440647:-1:exon
subclass of: SO_0000010

117410108
type: Gene
SIO_000068: ncbigene

position:2435864:-1
position: 2435864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2440647:-1
position: 2440647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2435864-2440647:-1:exon

LOC117410108
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410108
product: zinc finger protein 135-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034016519.2
SIO_010081: LOC117410108
subclass of: SO_0000673
so part of: LOC117410108
location: complement(join(2435864..2437908,2438774..2439061,2440265..2440647))
location: region:2435864-2440647:-1
so has part: feature:2440265-2440647:-1:exon
so has part: feature:2438774-2439061:-1:exon
so has part: feature:2435864-2437908:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2440265-2440647:-1:exon

position:2440265:-1
position: 2440265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2438774-2439061:-1:exon

position:2438774:-1
position: 2438774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2439061:-1
position: 2439061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2435864-2437908:-1:exon

position:2437908:-1
position: 2437908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117410108
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 135-like
translation: MNPAPKDELPDLETAHSKGEFVYQTPSSVLKDEETGQGSDYKDADSSPVREAGNESETGKEEIPAGDSSKISRSPATSYDEERDPGFVGSSCPHCGSRFSRQRDLAKHMKKTHLEEIVKILKTRSVHTTGLPLPNGRESEIPPADVPATSESAVEPGTCRVAETKHGEGMGERSDGKEKNNNEETAVTPYDYPESRQSLNLKTKEVTHSGETLYAFGCGGDDSDQLGSLKTPAGFLPPYICTECGKRFNGSGTLKRHRRIHTGESPYHCIECGKNFKDSGALKRHRRIHTGESPYHCTECEKKFRQLGHLKEHQRIHTGETPYHCAQCRKSFSQLGNLKTHQRIHTGETPYACADCGKSFRQIRQLRTHQQVHTGETPFHCSECGKSFKWMCSLKEHQRIHTGEAPYGCPDCGKSFKGAGTLKKHRRVHTGETPYSCGDCGKAFKESGALRRHQRIHTGETPYHCSVCSKKFSRVDHLKDHQRIHSGE
SIO_010081: LOC117410108
subclass of: SO_0000673
so part of: LOC117410108
location: complement(join(2436677..2437908,2438774..2439008))
location: region:2436677-2439008:-1
so has part: feature:2438774-2439008:-1:exon
so has part: feature:2436677-2437908:-1:exon

XP_033872410.2
type: Protein
SIO_000068: ncbiprotein

position:2436677:-1
position: 2436677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2439008:-1
position: 2439008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2438774-2439008:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2436677-2437908:-1:exon

LOC117410162
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2442462..2447679
location: region:2442462-2447679:1
so has part: feature:2442462-2447679:1:exon
subclass of: SO_0000010

117410162
type: Gene
SIO_000068: ncbigene

position:2442462:1
position: 2442462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2447679:1
position: 2447679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2442462-2447679:1:exon

LOC117410162
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410162
product: uncharacterized LOC117410162
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034016611.2
SIO_010081: LOC117410162
subclass of: SO_0000673
so part of: LOC117410162
location: join(2442462..2442571,2443308..2443372,2443941..2444065,2444148..2444234,2444575..2444643,2444860..2445030,2446635..2446805,2447070..2447204,2447613..2447679)
location: region:2442462-2447679:1
so has part: feature:2442462-2442571:1:exon
so has part: feature:2443308-2443372:1:exon
so has part: feature:2443941-2444065:1:exon
so has part: feature:2444148-2444234:1:exon
so has part: feature:2444575-2444643:1:exon
so has part: feature:2444860-2445030:1:exon
so has part: feature:2446635-2446805:1:exon
so has part: feature:2447070-2447204:1:exon
so has part: feature:2447613-2447679:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2442462-2442571:1:exon

position:2442571:1
position: 2442571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2443308-2443372:1:exon

position:2443308:1
position: 2443308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2443372:1
position: 2443372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2443941-2444065:1:exon

position:2443941:1
position: 2443941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2444065:1
position: 2444065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2444148-2444234:1:exon

position:2444148:1
position: 2444148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2444234:1
position: 2444234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2444575-2444643:1:exon

position:2444575:1
position: 2444575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2444643:1
position: 2444643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2444860-2445030:1:exon

position:2444860:1
position: 2444860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2445030:1
position: 2445030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2446635-2446805:1:exon

position:2446635:1
position: 2446635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2446805:1
position: 2446805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2447070-2447204:1:exon

position:2447070:1
position: 2447070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2447204:1
position: 2447204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2447613-2447679:1:exon

position:2447613:1
position: 2447613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117410162
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117410162
translation: MQLEQGKEVTETGSPELQDKPTQQNHVVLRENHITGIRTAQSMPFNPPNLSGSLDIPRCNTDSVVHRKAQDRSMLTHDPRLIQNTSLEVCKHFILDWAERLRTISQKRVDLITDALQEAEGGCGHTEPQDSRAAAVEMYANQSLEECRDIIITWARELRNQCEPASEREEADENKNIDQENAEDFSRQSPEKTDQGKEWNLERCEVILKEWASELRSVTESCGLAQAESCGLDQLAVEKWTGELLCTVCPVIEFIMRALLEESL
SIO_010081: LOC117410162
subclass of: SO_0000673
so part of: LOC117410162
location: join(2443336..2443372,2443941..2444065,2444148..2444234,2444575..2444643,2444860..2445030,2446635..2446805,2447070..2447204)
location: region:2443336-2447204:1
so has part: feature:2443336-2443372:1:exon
so has part: feature:2443941-2444065:1:exon
so has part: feature:2444148-2444234:1:exon
so has part: feature:2444575-2444643:1:exon
so has part: feature:2444860-2445030:1:exon
so has part: feature:2446635-2446805:1:exon
so has part: feature:2447070-2447204:1:exon

XP_033872502.2
type: Protein
SIO_000068: ncbiprotein

position:2443336:1
position: 2443336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2443336-2443372:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2443941-2444065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2444148-2444234:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2444575-2444643:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2444860-2445030:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2446635-2446805:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2447070-2447204:1:exon

LOC117410155
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2451095..2458622
location: region:2451095-2458622:1
so has part: feature:2451095-2458622:1:exon
subclass of: SO_0000010

117410155
type: Gene
SIO_000068: ncbigene

position:2451095:1
position: 2451095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2458622:1
position: 2458622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2451095-2458622:1:exon

LOC117410155
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410155
product: erythroid membrane-associated protein-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034913471.1
SIO_010081: LOC117410155
subclass of: SO_0000673
so part of: LOC117410155
location: join(2451095..2451252,2453970..2454068,2455587..2455670,2457518..2457544,2457824..2458622)
location: region:2451095-2458622:1
so has part: feature:2451095-2451252:1:exon
so has part: feature:2453970-2454068:1:exon
so has part: feature:2455587-2455670:1:exon
so has part: feature:2457518-2457544:1:exon
so has part: feature:2457824-2458622:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2451095-2451252:1:exon

position:2451252:1
position: 2451252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2453970-2454068:1:exon

position:2453970:1
position: 2453970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2454068:1
position: 2454068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2455587-2455670:1:exon

position:2455587:1
position: 2455587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2455670:1
position: 2455670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2457518-2457544:1:exon

position:2457518:1
position: 2457518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2457544:1
position: 2457544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2457824-2458622:1:exon

position:2457824:1
position: 2457824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117410155
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410155
product: erythroid membrane-associated protein-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034913472.1
SIO_010081: LOC117410155
subclass of: SO_0000673
so part of: LOC117410155
location: join(2451095..2451252,2455587..2455670,2457518..2457544,2457824..2458622)
location: region:2451095-2458622:1
so has part: feature:2451095-2451252:1:exon
so has part: feature:2455587-2455670:1:exon
so has part: feature:2457518-2457544:1:exon
so has part: feature:2457824-2458622:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2451095-2451252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2455587-2455670:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2457518-2457544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2457824-2458622:1:exon

LOC117410155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like isoform X1
translation: MEMENIYEVVHPPDQDIYSFLTAVEKQPGKHTVNTTVKKASSCNWTAVVFAVLWILSVSFALGVIFHRNAEYASLFQKYSDLQNQLKNYTDMTVWKWILDAAANVTLDPDTVHPKLILSEDRKQVRLGDTRQPLPDNPKKFDYVVSVLGRQGFTSGRHYWQVEVGEKTKWELGVARESINRKGMITRSPKNGLWIMWLKDGEYKALTDPWTPLPLSVKPRKVGVYLDYEEGQVSFYNVETRSHIYTFTDTFTEKLYPYFNPGLNKDGKNAAPLIILPVSDRD
SIO_010081: LOC117410155
subclass of: SO_0000673
so part of: LOC117410155
location: join(2451156..2451252,2453970..2454068,2455587..2455670,2457518..2457544,2457824..2458365)
location: region:2451156-2458365:1
so has part: feature:2451156-2451252:1:exon
so has part: feature:2453970-2454068:1:exon
so has part: feature:2455587-2455670:1:exon
so has part: feature:2457518-2457544:1:exon
so has part: feature:2457824-2458365:1:exon

XP_034769362.1
type: Protein
SIO_000068: ncbiprotein

position:2451156:1
position: 2451156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2458365:1
position: 2458365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2451156-2451252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2453970-2454068:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2455587-2455670:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2457518-2457544:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2457824-2458365:1:exon

LOC117410155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: erythroid membrane-associated protein-like isoform X2
translation: MEMENIYEVVHPPDQDIYSFLTAVEKQPGKHTVHRNAEYASLFQKYSDLQNQLKNYTDMTVWKWILDAAANVTLDPDTVHPKLILSEDRKQVRLGDTRQPLPDNPKKFDYVVSVLGRQGFTSGRHYWQVEVGEKTKWELGVARESINRKGMITRSPKNGLWIMWLKDGEYKALTDPWTPLPLSVKPRKVGVYLDYEEGQVSFYNVETRSHIYTFTDTFTEKLYPYFNPGLNKDGKNAAPLIILPVSDRD
SIO_010081: LOC117410155
subclass of: SO_0000673
so part of: LOC117410155
location: join(2451156..2451252,2455587..2455670,2457518..2457544,2457824..2458365)
location: region:2451156-2458365:1
so has part: feature:2451156-2451252:1:exon
so has part: feature:2455587-2455670:1:exon
so has part: feature:2457518-2457544:1:exon
so has part: feature:2457824-2458365:1:exon

XP_034769363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2451156-2451252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2455587-2455670:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2457518-2457544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2457824-2458365:1:exon

LOC117409986
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117409986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2460240..2487915
location: region:2460240-2487915:1
so has part: feature:2460240-2487915:1:exon
subclass of: SO_0000010

117409986
type: Gene
SIO_000068: ncbigene

position:2460240:1
position: 2460240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2487915:1
position: 2487915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2460240-2487915:1:exon

LOC117409986
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117409986
product: E3 ubiquitin-protein ligase TRIM39-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034913467.1
SIO_010081: LOC117409986
subclass of: SO_0000673
so part of: LOC117409986
location: join(2460240..2460397,2471774..2471872,2476646..2476729,2477558..2477641,2485199..2485282,2486070..2486168,2486507..2486533,2486810..2487915)
location: region:2460240-2487915:1
so has part: feature:2460240-2460397:1:exon
so has part: feature:2471774-2471872:1:exon
so has part: feature:2476646-2476729:1:exon
so has part: feature:2477558-2477641:1:exon
so has part: feature:2485199-2485282:1:exon
so has part: feature:2486070-2486168:1:exon
so has part: feature:2486507-2486533:1:exon
so has part: feature:2486810-2487915:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2460240-2460397:1:exon

position:2460397:1
position: 2460397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2471774-2471872:1:exon

position:2471774:1
position: 2471774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2471872:1
position: 2471872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2476646-2476729:1:exon

position:2476646:1
position: 2476646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2476729:1
position: 2476729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2477558-2477641:1:exon

position:2477558:1
position: 2477558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2477641:1
position: 2477641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2485199-2485282:1:exon

position:2485199:1
position: 2485199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2485282:1
position: 2485282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2486070-2486168:1:exon

position:2486070:1
position: 2486070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2486168:1
position: 2486168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2486507-2486533:1:exon

position:2486507:1
position: 2486507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2486533:1
position: 2486533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2486810-2487915:1:exon

position:2486810:1
position: 2486810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117409986
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117409986
product: E3 ubiquitin-protein ligase TRIM39-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034913468.1
SIO_010081: LOC117409986
subclass of: SO_0000673
so part of: LOC117409986
location: join(2460240..2460397,2476463..2476561,2476646..2476729,2477558..2477641,2485199..2485282,2486070..2486168,2486507..2486533,2486810..2487915)
location: region:2460240-2487915:1
so has part: feature:2460240-2460397:1:exon
so has part: feature:2476463-2476561:1:exon
so has part: feature:2476646-2476729:1:exon
so has part: feature:2477558-2477641:1:exon
so has part: feature:2485199-2485282:1:exon
so has part: feature:2486070-2486168:1:exon
so has part: feature:2486507-2486533:1:exon
so has part: feature:2486810-2487915:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2460240-2460397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2476463-2476561:1:exon

position:2476463:1
position: 2476463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2476561:1
position: 2476561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2476646-2476729:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2477558-2477641:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2485199-2485282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2486070-2486168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2486507-2486533:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2486810-2487915:1:exon

LOC117409986
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117409986
product: E3 ubiquitin-protein ligase TRIM39-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034913466.1
SIO_010081: LOC117409986
subclass of: SO_0000673
so part of: LOC117409986
location: join(2460240..2460397,2463435..2463533,2463782..2463865,2476646..2476729,2477558..2477641,2485199..2485282,2486070..2486168,2486507..2486533,2486810..2487659)
location: region:2460240-2487659:1
so has part: feature:2460240-2460397:1:exon
so has part: feature:2463435-2463533:1:exon
so has part: feature:2463782-2463865:1:exon
so has part: feature:2476646-2476729:1:exon
so has part: feature:2477558-2477641:1:exon
so has part: feature:2485199-2485282:1:exon
so has part: feature:2486070-2486168:1:exon
so has part: feature:2486507-2486533:1:exon
so has part: feature:2486810-2487659:1:exon

position:2487659:1
position: 2487659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2460240-2460397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2463435-2463533:1:exon

position:2463435:1
position: 2463435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2463533:1
position: 2463533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2463782-2463865:1:exon

position:2463782:1
position: 2463782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2463865:1
position: 2463865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2476646-2476729:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2477558-2477641:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2485199-2485282:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2486070-2486168:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2486507-2486533:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2486810-2487659:1:exon

LOC117409986
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117409986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like isoform X1
translation: MVMKNIYDVVETPDQDIYANIPPMEKQPGKHTVNTTVKKASSFNWAAVVIAVLWILSVSITLGVIFHRNAEYASLFQEYSDLQNQLKNYTNMTVHRNAEYASLFQEYSDLQNQLKNYTNMIVHRNAEYTSLFQEYSDLQNQLKNYTDMTVHRNAEYASLFQEYSDLQNQLKNYTDMTVHRNAEYASLFQKYSNLQNHLKKDTNMTENYSAVWKWILDAAVDVTLDPDTAHPSLILSEDRKQVRLGGTRQPLPVNPKRFDPVVNVLGWQGFTSGRHYWQVEVGEKTEWYLGVARESINRKGDITLTPKNGYWTVWLTDGEYKAPDITLPLNVKPRKLGVYLDYEEGQVSFYNVETRSHIYTFTDTFTEKLYPYFSPSTNKDGKNAAPLIILPVSDRD
SIO_010081: LOC117409986
subclass of: SO_0000673
so part of: LOC117409986
location: join(2460301..2460397,2463435..2463533,2463782..2463865,2476646..2476729,2477558..2477641,2485199..2485282,2486070..2486168,2486507..2486533,2486810..2487342)
location: region:2460301-2487342:1
so has part: feature:2460301-2460397:1:exon
so has part: feature:2463435-2463533:1:exon
so has part: feature:2463782-2463865:1:exon
so has part: feature:2476646-2476729:1:exon
so has part: feature:2477558-2477641:1:exon
so has part: feature:2485199-2485282:1:exon
so has part: feature:2486070-2486168:1:exon
so has part: feature:2486507-2486533:1:exon
so has part: feature:2486810-2487342:1:exon

XP_034769357.1
type: Protein
SIO_000068: ncbiprotein

position:2460301:1
position: 2460301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2487342:1
position: 2487342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2460301-2460397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2463435-2463533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2463782-2463865:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2476646-2476729:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2477558-2477641:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2485199-2485282:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2486070-2486168:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2486507-2486533:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2486810-2487342:1:exon

LOC117409986
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117409986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like isoform X2
translation: MVMKNIYDVVETPDQDIYANIPPMEKQPGKHTANTTVKKASSCKWAAVVFAVLWILSVSVTLGVIFHRNAEYASLFQEYSDLQNQLKNYTNMIVHRNAEYTSLFQEYSDLQNQLKNYTDMTVHRNAEYASLFQEYSDLQNQLKNYTDMTVHRNAEYASLFQKYSNLQNHLKKDTNMTENYSAVWKWILDAAVDVTLDPDTAHPSLILSEDRKQVRLGGTRQPLPVNPKRFDPVVNVLGWQGFTSGRHYWQVEVGEKTEWYLGVARESINRKGDITLTPKNGYWTVWLTDGEYKAPDITLPLNVKPRKLGVYLDYEEGQVSFYNVETRSHIYTFTDTFTEKLYPYFSPSTNKDGKNAAPLIILPVSDRD
SIO_010081: LOC117409986
subclass of: SO_0000673
so part of: LOC117409986
location: join(2460301..2460397,2471774..2471872,2476646..2476729,2477558..2477641,2485199..2485282,2486070..2486168,2486507..2486533,2486810..2487342)
location: region:2460301-2487342:1
so has part: feature:2460301-2460397:1:exon
so has part: feature:2471774-2471872:1:exon
so has part: feature:2476646-2476729:1:exon
so has part: feature:2477558-2477641:1:exon
so has part: feature:2485199-2485282:1:exon
so has part: feature:2486070-2486168:1:exon
so has part: feature:2486507-2486533:1:exon
so has part: feature:2486810-2487342:1:exon

XP_034769358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2460301-2460397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2471774-2471872:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2476646-2476729:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2477558-2477641:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2485199-2485282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2486070-2486168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2486507-2486533:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2486810-2487342:1:exon

LOC117409986
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117409986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like isoform X3
translation: MVMKNIYDVVETPDQDIYANIPPMEKQPGKHTANTTVKKASSFKWAAVVFAVLWILSVSVTLGVIFHRNAEYASLFQEYSDLQNQLKNYTNMIVHRNAEYTSLFQEYSDLQNQLKNYTDMTVHRNAEYASLFQEYSDLQNQLKNYTDMTVHRNAEYASLFQKYSNLQNHLKKDTNMTENYSAVWKWILDAAVDVTLDPDTAHPSLILSEDRKQVRLGGTRQPLPVNPKRFDPVVNVLGWQGFTSGRHYWQVEVGEKTEWYLGVARESINRKGDITLTPKNGYWTVWLTDGEYKAPDITLPLNVKPRKLGVYLDYEEGQVSFYNVETRSHIYTFTDTFTEKLYPYFSPSTNKDGKNAAPLIILPVSDRD
SIO_010081: LOC117409986
subclass of: SO_0000673
so part of: LOC117409986
location: join(2460301..2460397,2476463..2476561,2476646..2476729,2477558..2477641,2485199..2485282,2486070..2486168,2486507..2486533,2486810..2487342)
location: region:2460301-2487342:1
so has part: feature:2460301-2460397:1:exon
so has part: feature:2476463-2476561:1:exon
so has part: feature:2476646-2476729:1:exon
so has part: feature:2477558-2477641:1:exon
so has part: feature:2485199-2485282:1:exon
so has part: feature:2486070-2486168:1:exon
so has part: feature:2486507-2486533:1:exon
so has part: feature:2486810-2487342:1:exon

XP_034769359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2460301-2460397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2476463-2476561:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2476646-2476729:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2477558-2477641:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2485199-2485282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2486070-2486168:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2486507-2486533:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2486810-2487342:1:exon

LOC117966790
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2490376..2497278
location: region:2490376-2497278:1
so has part: feature:2490376-2497278:1:exon
subclass of: SO_0000010

117966790
type: Gene
SIO_000068: ncbigene

position:2490376:1
position: 2490376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2497278:1
position: 2497278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2490376-2497278:1:exon

LOC117966790
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966790
product: E3 ubiquitin-protein ligase TRIM39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034913470.1
SIO_010081: LOC117966790
subclass of: SO_0000673
so part of: LOC117966790
location: join(2490376..2490498,2494116..2494214,2496041..2496139,2496423..2496449,2496732..2497278)
location: region:2490376-2497278:1
so has part: feature:2490376-2490498:1:exon
so has part: feature:2494116-2494214:1:exon
so has part: feature:2496041-2496139:1:exon
so has part: feature:2496423-2496449:1:exon
so has part: feature:2496732-2497278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2490376-2490498:1:exon

position:2490498:1
position: 2490498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2494116-2494214:1:exon

position:2494116:1
position: 2494116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2494214:1
position: 2494214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2496041-2496139:1:exon

position:2496041:1
position: 2496041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2496139:1
position: 2496139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2496423-2496449:1:exon

position:2496423:1
position: 2496423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2496449:1
position: 2496449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2496732-2497278:1:exon

position:2496732:1
position: 2496732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117966790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: MDMEDIYTGLQKPDQDIYSVIPPGEKEPGKPTVNTTVKKASSFNWTAVVFAVLWILSVSVALGVIFHRNAEYASLFQKYSDLQNHLKKDTNMTEICTVVWKWILDAAADVTLDPDTANPYLILSEDRKQVSDGDTRQNLTDNPERFDYVVSVLGRQGFTSGRHYWQVEVGEKAQWYLGVARESINRKGKIQLDPNNGYWTVWRRDGEYRALADPSIPLPLSVKPRKVGVYLDYEEGQLTFYNVETRSHIYTFTDTFTEKLYPYFCPSTNEDGKNAAPLIILPVSDRD
SIO_010081: LOC117966790
subclass of: SO_0000673
so part of: LOC117966790
location: join(2490402..2490498,2494116..2494214,2496041..2496139,2496423..2496449,2496732..2497273)
location: region:2490402-2497273:1
so has part: feature:2490402-2490498:1:exon
so has part: feature:2494116-2494214:1:exon
so has part: feature:2496041-2496139:1:exon
so has part: feature:2496423-2496449:1:exon
so has part: feature:2496732-2497273:1:exon

XP_034769361.1
type: Protein
SIO_000068: ncbiprotein

position:2490402:1
position: 2490402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2497273:1
position: 2497273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2490402-2490498:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2494116-2494214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2496041-2496139:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2496423-2496449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2496732-2497273:1:exon

LOC117966810
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966810
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2501321..2537370
location: region:2501321-2537370:1
so has part: feature:2501321-2537370:1:exon
subclass of: SO_0000010

117966810
type: Gene
SIO_000068: ncbigene

position:2501321:1
position: 2501321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2537370:1
position: 2537370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2501321-2537370:1:exon

LOC117966810
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966810
product: rho guanine nucleotide exchange factor 11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034913503.1
SIO_010081: LOC117966810
subclass of: SO_0000673
so part of: LOC117966810
location: join(2501321..2501538,2503483..2503515,2504308..2504322,2504972..2505069,2505457..2505555,2506028..2506077,2507923..2507980,2508162..2508355,2508767..2508838,2509086..2509193,2509939..2509993,2510568..2510605,2511554..2511658,2511761..2511829,2512572..2512676,2514301..2514399,2515113..2515155,2515900..2515996,2516192..2516314,2517234..2517257,2518093..2518228,2518488..2518599,2519360..2519389,2520120..2520149,2520527..2520662,2521586..2521783,2522047..2522094,2522773..2522927,2524455..2524595,2525391..2525467,2526188..2526313,2527416..2527533,2528099..2528277,2529117..2529192,2529849..2530019,2531029..2531110,2531247..2531327,2531737..2531801,2532829..2533002,2534545..2534757,2536679..2537370)
location: region:2501321-2537370:1
so has part: feature:2501321-2501538:1:exon
so has part: feature:2503483-2503515:1:exon
so has part: feature:2504308-2504322:1:exon
so has part: feature:2504972-2505069:1:exon
so has part: feature:2505457-2505555:1:exon
so has part: feature:2506028-2506077:1:exon
so has part: feature:2507923-2507980:1:exon
so has part: feature:2508162-2508355:1:exon
so has part: feature:2508767-2508838:1:exon
so has part: feature:2509086-2509193:1:exon
so has part: feature:2509939-2509993:1:exon
so has part: feature:2510568-2510605:1:exon
so has part: feature:2511554-2511658:1:exon
so has part: feature:2511761-2511829:1:exon
so has part: feature:2512572-2512676:1:exon
so has part: feature:2514301-2514399:1:exon
so has part: feature:2515113-2515155:1:exon
so has part: feature:2515900-2515996:1:exon
so has part: feature:2516192-2516314:1:exon
so has part: feature:2517234-2517257:1:exon
so has part: feature:2518093-2518228:1:exon
so has part: feature:2518488-2518599:1:exon
so has part: feature:2519360-2519389:1:exon
so has part: feature:2520120-2520149:1:exon
so has part: feature:2520527-2520662:1:exon
so has part: feature:2521586-2521783:1:exon
so has part: feature:2522047-2522094:1:exon
so has part: feature:2522773-2522927:1:exon
so has part: feature:2524455-2524595:1:exon
so has part: feature:2525391-2525467:1:exon
so has part: feature:2526188-2526313:1:exon
so has part: feature:2527416-2527533:1:exon
so has part: feature:2528099-2528277:1:exon
so has part: feature:2529117-2529192:1:exon
so has part: feature:2529849-2530019:1:exon
so has part: feature:2531029-2531110:1:exon
so has part: feature:2531247-2531327:1:exon
so has part: feature:2531737-2531801:1:exon
so has part: feature:2532829-2533002:1:exon
so has part: feature:2534545-2534757:1:exon
so has part: feature:2536679-2537370:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2501321-2501538:1:exon

position:2501538:1
position: 2501538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2503483-2503515:1:exon

position:2503483:1
position: 2503483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2503515:1
position: 2503515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2504308-2504322:1:exon

position:2504308:1
position: 2504308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2504322:1
position: 2504322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2504972-2505069:1:exon

position:2504972:1
position: 2504972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2505069:1
position: 2505069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2505457-2505555:1:exon

position:2505457:1
position: 2505457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2505555:1
position: 2505555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2506028-2506077:1:exon

position:2506028:1
position: 2506028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2506077:1
position: 2506077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2507923-2507980:1:exon

position:2507923:1
position: 2507923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2507980:1
position: 2507980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2508162-2508355:1:exon

position:2508162:1
position: 2508162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2508355:1
position: 2508355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2508767-2508838:1:exon

position:2508767:1
position: 2508767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2508838:1
position: 2508838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2509086-2509193:1:exon

position:2509086:1
position: 2509086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2509193:1
position: 2509193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2509939-2509993:1:exon

position:2509939:1
position: 2509939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2509993:1
position: 2509993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2510568-2510605:1:exon

position:2510568:1
position: 2510568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2510605:1
position: 2510605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2511554-2511658:1:exon

position:2511554:1
position: 2511554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2511658:1
position: 2511658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2511761-2511829:1:exon

position:2511761:1
position: 2511761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2511829:1
position: 2511829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2512572-2512676:1:exon

position:2512572:1
position: 2512572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2512676:1
position: 2512676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2514301-2514399:1:exon

position:2514301:1
position: 2514301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2514399:1
position: 2514399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2515113-2515155:1:exon

position:2515113:1
position: 2515113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2515155:1
position: 2515155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2515900-2515996:1:exon

position:2515900:1
position: 2515900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2515996:1
position: 2515996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2516192-2516314:1:exon

position:2516192:1
position: 2516192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2516314:1
position: 2516314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2517234-2517257:1:exon

position:2517234:1
position: 2517234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2517257:1
position: 2517257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2518093-2518228:1:exon

position:2518093:1
position: 2518093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2518228:1
position: 2518228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2518488-2518599:1:exon

position:2518488:1
position: 2518488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2518599:1
position: 2518599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2519360-2519389:1:exon

position:2519360:1
position: 2519360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2519389:1
position: 2519389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2520120-2520149:1:exon

position:2520120:1
position: 2520120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2520149:1
position: 2520149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2520527-2520662:1:exon

position:2520527:1
position: 2520527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2520662:1
position: 2520662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2521586-2521783:1:exon

position:2521586:1
position: 2521586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2521783:1
position: 2521783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2522047-2522094:1:exon

position:2522047:1
position: 2522047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2522094:1
position: 2522094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2522773-2522927:1:exon

position:2522773:1
position: 2522773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2522927:1
position: 2522927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2524455-2524595:1:exon

position:2524455:1
position: 2524455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2524595:1
position: 2524595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2525391-2525467:1:exon

position:2525391:1
position: 2525391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2525467:1
position: 2525467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2526188-2526313:1:exon

position:2526188:1
position: 2526188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2526313:1
position: 2526313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2527416-2527533:1:exon

position:2527416:1
position: 2527416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2527533:1
position: 2527533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2528099-2528277:1:exon

position:2528099:1
position: 2528099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2528277:1
position: 2528277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2529117-2529192:1:exon

position:2529117:1
position: 2529117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2529192:1
position: 2529192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2529849-2530019:1:exon

position:2529849:1
position: 2529849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2530019:1
position: 2530019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2531029-2531110:1:exon

position:2531029:1
position: 2531029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2531110:1
position: 2531110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:2531247-2531327:1:exon

position:2531247:1
position: 2531247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2531327:1
position: 2531327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:2531737-2531801:1:exon

position:2531737:1
position: 2531737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2531801:1
position: 2531801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:2532829-2533002:1:exon

position:2532829:1
position: 2532829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2533002:1
position: 2533002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:2534545-2534757:1:exon

position:2534545:1
position: 2534545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2534757:1
position: 2534757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:2536679-2537370:1:exon

position:2536679:1
position: 2536679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117966810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117966810
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 11-like
translation: MNLRTPTSALDRSASKRQSHLPSPLAAWLSSLSMGDSVPDRRNSANHQREPSLDSSTENTGLVQRCVIVQKDQQGFGFTVCGDRIVLVQHVRPGGAAMKAGVHEGDRIIKVNGSLVSSLTHQEVVRLIKSGQYVALTLQGPPHSTASLPLLTDASSNLRSGPGGLAPPPPPPPLPPNSTSLSASDRITSPRPLQDSEVQKHGSQILRKMLKQEEAELQELLEEHSRNPSPSLEERIESARRRANQVRVKIQQDVENSRSRSESSAGYLRAGEGRLSMDSQDGDTEGFSILSESPRSSPLLPVRTSHHRRQGSDAFFTSEQVSRPQIIGPEEEEDDEDSYLQNEMDGPFQDIDRLKSRPAHMAVFMRYIFSQLLDPNPLLFYLSVEAYLSSSQKDARSLALQISAHFLEKDAPLKIHIPEDINSEIESRIQSQEDIRGPLSDVQHLVLPEIQDQIQDYRSKQMMGLGSLFGEGDLQQLDGDPSRERQIVDKQAAALWEILSKHEEDRSSPMAAAVLLYLRYSGIKLRDSRAFNLLEKPQEREKWLPFFPKTKKPSSAKKDKEKERDSGEDRKRNPILKYIAKPKGASSQSTFHLPLSPAEEIHASSSPTEVLPGSVRNMILQFENTHQYDSPDSPDLNAQRLSTGSLTEHLLESDRAPGSVKLARSESLKTQGELRKPRVEAVPRSRSDVDMEDAAEEREREGEGPRLHQSASSSASSLSARSMENATPPYTPKSRRRSMDSPNSMYPENLLPNLSEDDPESQNWQETVGRDLLSTLEPREIERQAVIYELFTTESSHLRTLRVLDQVFYQKMKTVLNSEELNCIFPSLPAVIEVHASLCDSMKRLRDSSFVNAIGDIMLARFEGSAGEDFQEIVSQFCSHQALALELIKNKQRKEPRFQQLIQECEANPQCRRLQLKDLLVSEMQRLTKYPLLLGNIIKYTDSLNPDLPLLKRAQHCCRGILKVVNQAVKETENRHRLDQYQRKLDLTPLERTTNPVAAQFKNLDLTTKRMIHEGPLTWRVSKDKTIELQALLLEDLLVLLQRVDDRLVLRCPTKTLGGGGSDLKMFFSPIVRLDSVLVRSVATDKKALFIISTSERQIYELVAGTSSEKNTWKDLLEEAVSLATQSQAPANHRPAAVTSSSLDLEPESSGATGSVDYNSEESLVEPSVSMETETAEDTDEVTTPTPPADQSVSGIDDVTEPPPPCFAGGIADAALQDVENLRKLIFKNVRLDSLDTPPADGTANEIPGGACSASPVPTQGREQEAGNHAPNPRGSQSEPGASFRVVRKAEGAGTSSFTDDVTLDSSRSGGCSQTDELKGGGVSRDGN
SIO_010081: LOC117966810
subclass of: SO_0000673
so part of: LOC117966810
location: join(2501504..2501538,2503483..2503515,2504308..2504322,2504972..2505069,2505457..2505555,2506028..2506077,2507923..2507980,2508162..2508355,2508767..2508838,2509086..2509193,2509939..2509993,2510568..2510605,2511554..2511658,2511761..2511829,2512572..2512676,2514301..2514399,2515113..2515155,2515900..2515996,2516192..2516314,2517234..2517257,2518093..2518228,2518488..2518599,2519360..2519389,2520120..2520149,2520527..2520662,2521586..2521783,2522047..2522094,2522773..2522927,2524455..2524595,2525391..2525467,2526188..2526313,2527416..2527533,2528099..2528277,2529117..2529192,2529849..2530019,2531029..2531110,2531247..2531327,2531737..2531801,2532829..2533002,2534545..2534757,2536679..2536797)
location: region:2501504-2536797:1
so has part: feature:2501504-2501538:1:exon
so has part: feature:2503483-2503515:1:exon
so has part: feature:2504308-2504322:1:exon
so has part: feature:2504972-2505069:1:exon
so has part: feature:2505457-2505555:1:exon
so has part: feature:2506028-2506077:1:exon
so has part: feature:2507923-2507980:1:exon
so has part: feature:2508162-2508355:1:exon
so has part: feature:2508767-2508838:1:exon
so has part: feature:2509086-2509193:1:exon
so has part: feature:2509939-2509993:1:exon
so has part: feature:2510568-2510605:1:exon
so has part: feature:2511554-2511658:1:exon
so has part: feature:2511761-2511829:1:exon
so has part: feature:2512572-2512676:1:exon
so has part: feature:2514301-2514399:1:exon
so has part: feature:2515113-2515155:1:exon
so has part: feature:2515900-2515996:1:exon
so has part: feature:2516192-2516314:1:exon
so has part: feature:2517234-2517257:1:exon
so has part: feature:2518093-2518228:1:exon
so has part: feature:2518488-2518599:1:exon
so has part: feature:2519360-2519389:1:exon
so has part: feature:2520120-2520149:1:exon
so has part: feature:2520527-2520662:1:exon
so has part: feature:2521586-2521783:1:exon
so has part: feature:2522047-2522094:1:exon
so has part: feature:2522773-2522927:1:exon
so has part: feature:2524455-2524595:1:exon
so has part: feature:2525391-2525467:1:exon
so has part: feature:2526188-2526313:1:exon
so has part: feature:2527416-2527533:1:exon
so has part: feature:2528099-2528277:1:exon
so has part: feature:2529117-2529192:1:exon
so has part: feature:2529849-2530019:1:exon
so has part: feature:2531029-2531110:1:exon
so has part: feature:2531247-2531327:1:exon
so has part: feature:2531737-2531801:1:exon
so has part: feature:2532829-2533002:1:exon
so has part: feature:2534545-2534757:1:exon
so has part: feature:2536679-2536797:1:exon

XP_034769394.1
type: Protein
SIO_000068: ncbiprotein

position:2501504:1
position: 2501504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2536797:1
position: 2536797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2501504-2501538:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2503483-2503515:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2504308-2504322:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2504972-2505069:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505457-2505555:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2506028-2506077:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2507923-2507980:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2508162-2508355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2508767-2508838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2509086-2509193:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2509939-2509993:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2510568-2510605:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2511554-2511658:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2511761-2511829:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2512572-2512676:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2514301-2514399:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2515113-2515155:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2515900-2515996:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2516192-2516314:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2517234-2517257:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2518093-2518228:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2518488-2518599:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2519360-2519389:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2520120-2520149:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2520527-2520662:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2521586-2521783:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2522047-2522094:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2522773-2522927:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2524455-2524595:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2525391-2525467:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2526188-2526313:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2527416-2527533:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2528099-2528277:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2529117-2529192:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2529849-2530019:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2531029-2531110:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2531247-2531327:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2531737-2531801:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2532829-2533002:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2534545-2534757:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2536679-2536797:1:exon

LOC117966813
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117966813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2544929..2552150)
location: region:2544929-2552150:-1
so has part: feature:2544929-2552150:-1:exon
subclass of: SO_0000010

117966813
type: Gene
SIO_000068: ncbigene

position:2544929:-1
position: 2544929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2552150:-1
position: 2552150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2544929-2552150:-1:exon

LOC117966813
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117966813
product: palmitoyltransferase ZDHHC3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034913510.1
SIO_010081: LOC117966813
subclass of: SO_0000673
so part of: LOC117966813
location: complement(join(2544929..2545625,2545766..2545895,2546693..2546765,2547365..2547479,2547692..2547753,2548023..2548138,2549708..2549781,2550620..2550708,2551823..2552150))
location: region:2544929-2552150:-1
so has part: feature:2551823-2552150:-1:exon
so has part: feature:2550620-2550708:-1:exon
so has part: feature:2549708-2549781:-1:exon
so has part: feature:2548023-2548138:-1:exon
so has part: feature:2547692-2547753:-1:exon
so has part: feature:2547365-2547479:-1:exon
so has part: feature:2546693-2546765:-1:exon
so has part: feature:2545766-2545895:-1:exon
so has part: feature:2544929-2545625:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2551823-2552150:-1:exon

position:2551823:-1
position: 2551823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2550620-2550708:-1:exon

position:2550620:-1
position: 2550620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2550708:-1
position: 2550708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2549708-2549781:-1:exon