Acipenser ruthenus isolate Gen_M01 chromosome 36, ASM1064508v1, whole genome shotgun sequence.
type: Entry
definition: Acipenser ruthenus isolate Gen_M01 chromosome 36, ASM1064508v1, whole genome shotgun sequence.
sequence version: NC_048358.1
sequence date: 2020-06-05
sequence: sequence
division: CON
label: NC_048358.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA635364
dblink: SAMN12612932
keyword: WGS
keyword: RefSeq
source: Acipenser ruthenus (sterlet)
organism: Acipenser ruthenus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser.
reference: 1
references: 32231327
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021286.1.\nAssembly name: ASM1064508v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of Wuerzburg on\n2020/02/19. The original whole-genome shotgun project has the\naccession VTUV00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of Wuerzburg\nAssembly Method :: SmartDeNovo v. May-2017; 3D-DNA v. 180114\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 42.0x\nSequencing Technology :: Illumina NovaSeq; PacBio; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Acipenser ruthenus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 11042709
topology: linear
so has quality: SO_0000987
location: 1..11042709
location: region:1-11042709:1
RO_0002162: 7906

NC_048358
type: RefSeq
SIO_000068: refseq

PRJNA635364
type: BioProject
SIO_000068: bioproject

SAMN12612932
type: BioSample
SIO_000068: biosample

1
title: The sterlet sturgeon genome sequence and the mechanisms of segmental rediploidization
author: Du, K.
author: Stock, M.
author: Kneitz, S.
author: Klopp, C.
author: Woltering, J.M.
author: Adolfi, M.C.
author: Feron, R.
author: Prokopov, D.
author: Makunin, A.
author: Kichigin, I.
author: Schmidt, C.
author: Fischer, P.
author: Kuhl, H.
author: Wuertz, S.
author: Gessner, J.
author: Kloas, W.
author: Cabau, C.
author: Iampietro, C.
author: Parrinello, H.
author: Tomlinson, C.
author: Journot, L.
author: Postlethwait, J.H.
author: Braasch, I.
author: Trifonov, V.
author: Warren, W.C.
author: Meyer, A.
author: Guiguen, Y.
author: Schartl, M.
journal: Nat Ecol Evol (2020)
pubmed: 32231327

32231327
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11042709:1
position: 11042709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-11042709:1:source
so part of: sequence
organism: Acipenser ruthenus
mol type: genomic DNA
isolate: Gen_M01
isolation source: water
chromosome: 36
tissue type: testis, blood
country: Germany: IGB
lat lon: 52.448940 N 13.648750 E
collection date: 2018

7906
type: Taxonomy
SIO_000068: taxonomy

LOC117398443
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398443
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(11761..11883)
location: region:11761-11883:-1
so has part: feature:11761-11883:-1:exon

117398443
type: Gene
SIO_000068: ncbigene

position:11761:-1
position: 11761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11883:-1
position: 11883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11761-11883:-1:exon

LOC117398443
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398443
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117398443
subclass of: SO_0000673
so part of: LOC117398443
location: complement(11761..11883)
location: region:11761-11883:-1
so has part: feature:11761-11883:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11761-11883:-1:exon

LOC117400869
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117400869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 39436..46114
location: region:39436-46114:1
so has part: feature:39436-46114:1:exon
subclass of: SO_0000010

117400869
type: Gene
SIO_000068: ncbigene

position:39436:1
position: 39436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46114:1
position: 46114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39436-46114:1:exon

LOC117400869
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117400869
product: transport and Golgi organization protein 1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911008.1
SIO_010081: LOC117400869
subclass of: SO_0000673
so part of: LOC117400869
location: join(39436..39823,40245..40332,41718..41764,42264..42348,42438..42541,43297..43488,44598..44633,44735..44802,44886..44986,45628..45677,45911..46114)
location: region:39436-46114:1
so has part: feature:39436-39823:1:exon
so has part: feature:40245-40332:1:exon
so has part: feature:41718-41764:1:exon
so has part: feature:42264-42348:1:exon
so has part: feature:42438-42541:1:exon
so has part: feature:43297-43488:1:exon
so has part: feature:44598-44633:1:exon
so has part: feature:44735-44802:1:exon
so has part: feature:44886-44986:1:exon
so has part: feature:45628-45677:1:exon
so has part: feature:45911-46114:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39436-39823:1:exon

position:39823:1
position: 39823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:40245-40332:1:exon

position:40245:1
position: 40245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40332:1
position: 40332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:41718-41764:1:exon

position:41718:1
position: 41718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41764:1
position: 41764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:42264-42348:1:exon

position:42264:1
position: 42264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42348:1
position: 42348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:42438-42541:1:exon

position:42438:1
position: 42438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42541:1
position: 42541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:43297-43488:1:exon

position:43297:1
position: 43297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43488:1
position: 43488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:44598-44633:1:exon

position:44598:1
position: 44598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44633:1
position: 44633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:44735-44802:1:exon

position:44735:1
position: 44735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44802:1
position: 44802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:44886-44986:1:exon

position:44886:1
position: 44886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44986:1
position: 44986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:45628-45677:1:exon

position:45628:1
position: 45628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45677:1
position: 45677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:45911-46114:1:exon

position:45911:1
position: 45911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117400869
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117400869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transport and Golgi organization protein 1 homolog
translation: MKMLQKISKDMADSIACKDCDIEALYEQISKLGGLKADAQCETVTIQEGNVNENQMKKTGKQINIVSQIQLTAKAEERDRNLAKLADEEKARREMEEKRRKNLEHRNLKTAQHKLEILRDLYEQNMEHSPTLWITSLKSFRKLLQEEHRHGEKEERLFEGNGNPVQANKELKIYKERLHKIQEKLKNTQYSYAYQNLSCEKAVHEKWLQKRAAERALQVQKDENANLRQKLVEAHIRLGNVQRASAIRLTPTHRVTQSLPQHSRACVQPLTASETPLDDPKNAAAGIPSSSPGTLMAGSSCSASSKKRSAPRPIINASAFSSVSGTAAQPMKEAAFPPNRPAIQPNE
SIO_010081: LOC117400869
subclass of: SO_0000673
so part of: LOC117400869
location: join(39755..39823,40245..40332,41718..41764,42264..42348,42438..42541,43297..43488,44598..44633,44735..44802,44886..44986,45628..45677,45911..46114)
location: region:39755-46114:1
so has part: feature:39755-39823:1:exon
so has part: feature:40245-40332:1:exon
so has part: feature:41718-41764:1:exon
so has part: feature:42264-42348:1:exon
so has part: feature:42438-42541:1:exon
so has part: feature:43297-43488:1:exon
so has part: feature:44598-44633:1:exon
so has part: feature:44735-44802:1:exon
so has part: feature:44886-44986:1:exon
so has part: feature:45628-45677:1:exon
so has part: feature:45911-46114:1:exon

XP_034766899.1
type: Protein
SIO_000068: ncbiprotein

position:39755:1
position: 39755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39755-39823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40245-40332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41718-41764:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:42264-42348:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:42438-42541:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43297-43488:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44598-44633:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44735-44802:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44886-44986:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45628-45677:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:45911-46114:1:exon

LOC117965906
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965906
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(56688..57727)
location: region:56688-57727:-1
so has part: feature:56688-57727:-1:exon
subclass of: SO_0000011

117965906
type: Gene
SIO_000068: ncbigene

position:56688:-1
position: 56688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57727:-1
position: 57727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56688-57727:-1:exon

LOC117965906
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965906
product: uncharacterized LOC117965906
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004661578.1
SIO_010081: LOC117965906
subclass of: SO_0000673
so part of: LOC117965906
location: complement(join(56688..56710,57495..57594,57684..57727))
location: region:56688-57727:-1
so has part: feature:57684-57727:-1:exon
so has part: feature:57495-57594:-1:exon
so has part: feature:56688-56710:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57684-57727:-1:exon

position:57684:-1
position: 57684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57495-57594:-1:exon

position:57495:-1
position: 57495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57594:-1
position: 57594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:56688-56710:-1:exon

position:56710:-1
position: 56710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965912
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965912
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(81289..81403)
location: region:81289-81403:-1
so has part: feature:81289-81403:-1:exon
subclass of: SO_0000623

117965912
type: Gene
SIO_000068: ncbigene

position:81289:-1
position: 81289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81403:-1
position: 81403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81289-81403:-1:exon

LOC117965912
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117965912
product: U5 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00020
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004661584.1
SIO_010081: LOC117965912
subclass of: SO_0000673
so part of: LOC117965912
location: complement(81289..81403)
location: region:81289-81403:-1
so has part: feature:81289-81403:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81289-81403:-1:exon

trnar-ucg
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnar-ucg
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 86368..86440
location: region:86368-86440:1
so has part: feature:86368-86440:1:exon
subclass of: SO_0000663

117405073
type: Gene
SIO_000068: ncbigene

position:86368:1
position: 86368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86440:1
position: 86440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86368-86440:1:exon

trnar-ucg
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnar-ucg
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon UCG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:86401..86403,aa:Arg,seq:tcg)
SIO_010081: trnar-ucg
subclass of: SO_0000673
so part of: trnar-ucg
location: 86368..86440
location: region:86368-86440:1
so has part: feature:86368-86440:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86368-86440:1:exon

trnar-ucg
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnar-ucg
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 87666..87738
location: region:87666-87738:1
so has part: feature:87666-87738:1:exon
subclass of: SO_0000663

117401180
type: Gene
SIO_000068: ncbigene

position:87666:1
position: 87666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87738:1
position: 87738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87666-87738:1:exon

trnar-ucg
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnar-ucg
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon UCG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:87699..87701,aa:Arg,seq:tcg)
SIO_010081: trnar-ucg
subclass of: SO_0000673
so part of: trnar-ucg
location: 87666..87738
location: region:87666-87738:1
so has part: feature:87666-87738:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87666-87738:1:exon

trnar-ucg
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnar-ucg
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 89875..89947
location: region:89875-89947:1
so has part: feature:89875-89947:1:exon
subclass of: SO_0000663

117401181
type: Gene
SIO_000068: ncbigene

position:89875:1
position: 89875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89947:1
position: 89947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89875-89947:1:exon

trnar-ucg
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnar-ucg
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon UCG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:89908..89910,aa:Arg,seq:tcg)
SIO_010081: trnar-ucg
subclass of: SO_0000673
so part of: trnar-ucg
location: 89875..89947
location: region:89875-89947:1
so has part: feature:89875-89947:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89875-89947:1:exon

trnar-ucg
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnar-ucg
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 217396..217468
location: region:217396-217468:1
so has part: feature:217396-217468:1:exon
subclass of: SO_0000663

117965934
type: Gene
SIO_000068: ncbigene

position:217396:1
position: 217396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217468:1
position: 217468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217396-217468:1:exon

trnar-ucg
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnar-ucg
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon UCG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:217429..217431,aa:Arg,seq:tcg)
SIO_010081: trnar-ucg
subclass of: SO_0000673
so part of: trnar-ucg
location: 217396..217468
location: region:217396-217468:1
so has part: feature:217396-217468:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217396-217468:1:exon

trnar-ucg
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnar-ucg
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 217882..217954
location: region:217882-217954:1
so has part: feature:217882-217954:1:exon
subclass of: SO_0000663

117405052
type: Gene
SIO_000068: ncbigene

position:217882:1
position: 217882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217954:1
position: 217954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217882-217954:1:exon

trnar-ucg
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnar-ucg
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon UCG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:217915..217917,aa:Arg,seq:tcg)
SIO_010081: trnar-ucg
subclass of: SO_0000673
so part of: trnar-ucg
location: 217882..217954
location: region:217882-217954:1
so has part: feature:217882-217954:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217882-217954:1:exon

trnar-ucg
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnar-ucg
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 220080..220152
location: region:220080-220152:1
so has part: feature:220080-220152:1:exon
subclass of: SO_0000663

117405053
type: Gene
SIO_000068: ncbigene

position:220080:1
position: 220080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220152:1
position: 220152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220080-220152:1:exon

trnar-ucg
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnar-ucg
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon UCG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:220113..220115,aa:Arg,seq:tcg)
SIO_010081: trnar-ucg
subclass of: SO_0000673
so part of: trnar-ucg
location: 220080..220152
location: region:220080-220152:1
so has part: feature:220080-220152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220080-220152:1:exon

LOC117404961
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 226938..232998
location: region:226938-232998:1
so has part: feature:226938-232998:1:exon
subclass of: SO_0000011

117404961
type: Gene
SIO_000068: ncbigene

position:226938:1
position: 226938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232998:1
position: 232998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226938-232998:1:exon

LOC117404961
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117404961
product: uncharacterized LOC117404961
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004661523.1
SIO_010081: LOC117404961
subclass of: SO_0000673
so part of: LOC117404961
location: join(226938..226975,231953..232088,232877..232998)
location: region:226938-232998:1
so has part: feature:226938-226975:1:exon
so has part: feature:231953-232088:1:exon
so has part: feature:232877-232998:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:226938-226975:1:exon

position:226975:1
position: 226975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:231953-232088:1:exon

position:231953:1
position: 231953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232088:1
position: 232088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:232877-232998:1:exon

position:232877:1
position: 232877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965812
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965812
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(245525..246665)
location: region:245525-246665:-1
so has part: feature:245525-246665:-1:exon
subclass of: SO_0000011

117965812
type: Gene
SIO_000068: ncbigene

position:245525:-1
position: 245525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246665:-1
position: 246665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245525-246665:-1:exon

LOC117965812
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965812
product: uncharacterized LOC117965812
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004661524.1
SIO_010081: LOC117965812
subclass of: SO_0000673
so part of: LOC117965812
location: complement(join(245525..245597,245722..245832,246485..246665))
location: region:245525-246665:-1
so has part: feature:246485-246665:-1:exon
so has part: feature:245722-245832:-1:exon
so has part: feature:245525-245597:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246485-246665:-1:exon

position:246485:-1
position: 246485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245722-245832:-1:exon

position:245722:-1
position: 245722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245832:-1
position: 245832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:245525-245597:-1:exon

position:245597:-1
position: 245597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

trnar-ucg
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnar-ucg
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 261878..261950
location: region:261878-261950:1
so has part: feature:261878-261950:1:exon
subclass of: SO_0000663

117405081
type: Gene
SIO_000068: ncbigene

position:261878:1
position: 261878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261950:1
position: 261950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261878-261950:1:exon

trnar-ucg
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnar-ucg
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon UCG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:261911..261913,aa:Arg,seq:tcg)
SIO_010081: trnar-ucg
subclass of: SO_0000673
so part of: trnar-ucg
location: 261878..261950
location: region:261878-261950:1
so has part: feature:261878-261950:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:261878-261950:1:exon

LOC117965813
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 274644..279677
location: region:274644-279677:1
so has part: feature:274644-279677:1:exon
subclass of: SO_0000011

117965813
type: Gene
SIO_000068: ncbigene

position:274644:1
position: 274644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279677:1
position: 279677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274644-279677:1:exon

LOC117965813
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965813
product: uncharacterized LOC117965813
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004661525.1
SIO_010081: LOC117965813
subclass of: SO_0000673
so part of: LOC117965813
location: join(274644..274681,278668..278728,279588..279677)
location: region:274644-279677:1
so has part: feature:274644-274681:1:exon
so has part: feature:278668-278728:1:exon
so has part: feature:279588-279677:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:274644-274681:1:exon

position:274681:1
position: 274681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:278668-278728:1:exon

position:278668:1
position: 278668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278728:1
position: 278728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:279588-279677:1:exon

position:279588:1
position: 279588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117404945
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404945
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(283131..291896)
location: region:283131-291896:-1
so has part: feature:283131-291896:-1:exon
subclass of: SO_0000010

117404945
type: Gene
SIO_000068: ncbigene

position:283131:-1
position: 283131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291896:-1
position: 291896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283131-291896:-1:exon

LOC117404945
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404945
product: transport and Golgi organization protein 1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034911009.1
SIO_010081: LOC117404945
subclass of: SO_0000673
so part of: LOC117404945
location: complement(join(283131..283232,283463..283512,284149..284249,284333..284400,284502..284537,285655..285817,286593..286692,286782..286866,287362..287408,288783..288870,289293..289415,289529..289633,290502..290573,290698..290808,291443..291896))
location: region:283131-291896:-1
so has part: feature:291443-291896:-1:exon
so has part: feature:290698-290808:-1:exon
so has part: feature:290502-290573:-1:exon
so has part: feature:289529-289633:-1:exon
so has part: feature:289293-289415:-1:exon
so has part: feature:288783-288870:-1:exon
so has part: feature:287362-287408:-1:exon
so has part: feature:286782-286866:-1:exon
so has part: feature:286593-286692:-1:exon
so has part: feature:285655-285817:-1:exon
so has part: feature:284502-284537:-1:exon
so has part: feature:284333-284400:-1:exon
so has part: feature:284149-284249:-1:exon
so has part: feature:283463-283512:-1:exon
so has part: feature:283131-283232:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291443-291896:-1:exon

position:291443:-1
position: 291443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:290698-290808:-1:exon

position:290698:-1
position: 290698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290808:-1
position: 290808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:290502-290573:-1:exon

position:290502:-1
position: 290502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290573:-1
position: 290573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:289529-289633:-1:exon

position:289529:-1
position: 289529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289633:-1
position: 289633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:289293-289415:-1:exon

position:289293:-1
position: 289293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289415:-1
position: 289415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:288783-288870:-1:exon

position:288783:-1
position: 288783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288870:-1
position: 288870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:287362-287408:-1:exon

position:287362:-1
position: 287362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287408:-1
position: 287408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:286782-286866:-1:exon

position:286782:-1
position: 286782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286866:-1
position: 286866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:286593-286692:-1:exon

position:286593:-1
position: 286593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286692:-1
position: 286692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:285655-285817:-1:exon

position:285655:-1
position: 285655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285817:-1
position: 285817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:284502-284537:-1:exon

position:284502:-1
position: 284502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284537:-1
position: 284537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:284333-284400:-1:exon

position:284333:-1
position: 284333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284400:-1
position: 284400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:284149-284249:-1:exon

position:284149:-1
position: 284149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284249:-1
position: 284249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:283463-283512:-1:exon

position:283463:-1
position: 283463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283512:-1
position: 283512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:283131-283232:-1:exon

position:283232:-1
position: 283232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117404945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404945
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transport and Golgi organization protein 1 homolog
translation: MCEYLQRVNESAEEQLRASQSALEQHKTKRANQEQLISEIQTSIQSCEKIFESWNAEPLKEAGVLEKDSLEEAEFRAKLQWTLEENERLNHEKEELLKEVKDGEKQRSKLTEEMKMLQKISKDMADSIACKDCDIEALYEQISKLGGLKADAQCETVTIQEGNVNENQMKKTGKQINIVSQIQLTAKAEERDRNLAKLADEEKARREMEEKRRNLEHRNLKTAQHKLEILRDLYEQTWNTLRQKLLQEEHRHGEKEERLFEGNGNPVQANKELKIYKERLHKIQEKLKNTQYSYAYQNLSCEKAVHEKWLQKRAAERALQVQKDENANLRQKLVEAHIRLGNVQRASAIRLTPTHRVTQSLPQHSRVCVQPLTASETPLDDPKNAAAGIPSSSPGTLMAGSSCSASSKKRSAPRP
SIO_010081: LOC117404945
subclass of: SO_0000673
so part of: LOC117404945
location: complement(join(283131..283232,283463..283512,284149..284249,284333..284400,284502..284537,285655..285817,286593..286692,286782..286866,287362..287408,288783..288870,289293..289415,289529..289633,290502..290573,290698..290805))
location: region:283131-290805:-1
so has part: feature:290698-290805:-1:exon
so has part: feature:290502-290573:-1:exon
so has part: feature:289529-289633:-1:exon
so has part: feature:289293-289415:-1:exon
so has part: feature:288783-288870:-1:exon
so has part: feature:287362-287408:-1:exon
so has part: feature:286782-286866:-1:exon
so has part: feature:286593-286692:-1:exon
so has part: feature:285655-285817:-1:exon
so has part: feature:284502-284537:-1:exon
so has part: feature:284333-284400:-1:exon
so has part: feature:284149-284249:-1:exon
so has part: feature:283463-283512:-1:exon
so has part: feature:283131-283232:-1:exon

XP_034766900.1
type: Protein
SIO_000068: ncbiprotein

position:290805:-1
position: 290805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290698-290805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290502-290573:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:289529-289633:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289293-289415:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288783-288870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287362-287408:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286782-286866:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286593-286692:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:285655-285817:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:284502-284537:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:284333-284400:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:284149-284249:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:283463-283512:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:283131-283232:-1:exon

LOC117404970
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404970
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(323388..349436)
location: region:323388-349436:-1
so has part: feature:323388-349436:-1:exon
subclass of: SO_0000010

117404970
type: Gene
SIO_000068: ncbigene

position:323388:-1
position: 323388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349436:-1
position: 349436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323388-349436:-1:exon

LOC117404970
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404970
product: transport and Golgi organization protein 1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911010.1
SIO_010081: LOC117404970
subclass of: SO_0000673
so part of: LOC117404970
location: complement(join(323388..323411,323465..323587,323823..323872,324513..324613,324697..324764,324866..324901,326013..326175,326955..327054,327144..327228,327730..327776,329150..329237,329662..329784,330883..330954,331079..331189,331832..331909,334671..334759,334969..334990,349269..349436))
location: region:323388-349436:-1
so has part: feature:349269-349436:-1:exon
so has part: feature:334969-334990:-1:exon
so has part: feature:334671-334759:-1:exon
so has part: feature:331832-331909:-1:exon
so has part: feature:331079-331189:-1:exon
so has part: feature:330883-330954:-1:exon
so has part: feature:329662-329784:-1:exon
so has part: feature:329150-329237:-1:exon
so has part: feature:327730-327776:-1:exon
so has part: feature:327144-327228:-1:exon
so has part: feature:326955-327054:-1:exon
so has part: feature:326013-326175:-1:exon
so has part: feature:324866-324901:-1:exon
so has part: feature:324697-324764:-1:exon
so has part: feature:324513-324613:-1:exon
so has part: feature:323823-323872:-1:exon
so has part: feature:323465-323587:-1:exon
so has part: feature:323388-323411:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349269-349436:-1:exon

position:349269:-1
position: 349269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:334969-334990:-1:exon

position:334969:-1
position: 334969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334990:-1
position: 334990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:334671-334759:-1:exon

position:334671:-1
position: 334671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334759:-1
position: 334759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:331832-331909:-1:exon

position:331832:-1
position: 331832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331909:-1
position: 331909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:331079-331189:-1:exon

position:331079:-1
position: 331079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331189:-1
position: 331189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:330883-330954:-1:exon

position:330883:-1
position: 330883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330954:-1
position: 330954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:329662-329784:-1:exon

position:329662:-1
position: 329662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329784:-1
position: 329784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:329150-329237:-1:exon

position:329150:-1
position: 329150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329237:-1
position: 329237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:327730-327776:-1:exon

position:327730:-1
position: 327730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327776:-1
position: 327776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:327144-327228:-1:exon

position:327144:-1
position: 327144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327228:-1
position: 327228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:326955-327054:-1:exon

position:326955:-1
position: 326955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327054:-1
position: 327054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:326013-326175:-1:exon

position:326013:-1
position: 326013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326175:-1
position: 326175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:324866-324901:-1:exon

position:324866:-1
position: 324866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324901:-1
position: 324901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:324697-324764:-1:exon

position:324697:-1
position: 324697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324764:-1
position: 324764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:324513-324613:-1:exon

position:324513:-1
position: 324513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324613:-1
position: 324613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:323823-323872:-1:exon

position:323823:-1
position: 323823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323872:-1
position: 323872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:323465-323587:-1:exon

position:323465:-1
position: 323465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323587:-1
position: 323587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:323388-323411:-1:exon

position:323411:-1
position: 323411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117404970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404970
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transport and Golgi organization protein 1 homolog
translation: MQRNGGECSKAPRTSSEEHYLLIEEGRNALRKDFVKQVLRRIKVDLDKVFCLQDFQIKRPMYQLTEIQLHQKIRQLSDEICQAAGHLSDLKHTIQEHGKHLKETEEATQSSTRENKNLQGMCEYLQRVNESAEEQLRASQSALEQHKTKRANQEQLISEIQTSIQRCEKIFESWNAEPLKLLKEVKDGEKHRSKLTEEMKMLQKISKEMADSIACKDCDIEALYEQISKLGGLKADAQCETVTIQEGNVNENQMKKTGKQINIVSQIQLTAKAEERDRNLAKLADEEKARCEMEEKRRNLEHRNLKTAQHKLEILRDLYEQTWNTLRQKLLQEEHRHGEKEERLFEGNGNPVQANKELKIYKGRLHKIQEKLKNTQYSYAYQNLSCEKAVHEKWLQKRAAERALQVQKDENANLRQKLVEAHIRLGNVQRASAIRLTPTHRVTQSLPQHSRACVQPLTASETPLDDPNAAAGIPSSSPGTLMAGSSCSASSKKRSAPPRPINASAFSSTCHSTNE
SIO_010081: LOC117404970
subclass of: SO_0000673
so part of: LOC117404970
location: complement(join(323388..323411,323465..323587,323823..323872,324513..324613,324697..324764,324866..324901,326013..326175,326955..327054,327144..327228,327730..327776,329150..329237,329662..329784,330883..330954,331079..331189,331832..331909,334671..334759,334969..334990,349269..349436))
location: region:323388-349436:-1
so has part: feature:349269-349436:-1:exon
so has part: feature:334969-334990:-1:exon
so has part: feature:334671-334759:-1:exon
so has part: feature:331832-331909:-1:exon
so has part: feature:331079-331189:-1:exon
so has part: feature:330883-330954:-1:exon
so has part: feature:329662-329784:-1:exon
so has part: feature:329150-329237:-1:exon
so has part: feature:327730-327776:-1:exon
so has part: feature:327144-327228:-1:exon
so has part: feature:326955-327054:-1:exon
so has part: feature:326013-326175:-1:exon
so has part: feature:324866-324901:-1:exon
so has part: feature:324697-324764:-1:exon
so has part: feature:324513-324613:-1:exon
so has part: feature:323823-323872:-1:exon
so has part: feature:323465-323587:-1:exon
so has part: feature:323388-323411:-1:exon

XP_034766901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349269-349436:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334969-334990:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334671-334759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331832-331909:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:331079-331189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330883-330954:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:329662-329784:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:329150-329237:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:327730-327776:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:327144-327228:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:326955-327054:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:326013-326175:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:324866-324901:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:324697-324764:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:324513-324613:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:323823-323872:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:323465-323587:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:323388-323411:-1:exon

LOC117404999
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404999
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(353389..353518)
location: region:353389-353518:-1
so has part: feature:353389-353518:-1:exon

117404999
type: Gene
SIO_000068: ncbigene

position:353389:-1
position: 353389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353518:-1
position: 353518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353389-353518:-1:exon

LOC117404999
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404999
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117404999
subclass of: SO_0000673
so part of: LOC117404999
location: complement(353389..353518)
location: region:353389-353518:-1
so has part: feature:353389-353518:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353389-353518:-1:exon

trnar-ucg
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnar-ucg
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 363345..363417
location: region:363345-363417:1
so has part: feature:363345-363417:1:exon
subclass of: SO_0000663

117405050
type: Gene
SIO_000068: ncbigene

position:363345:1
position: 363345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363417:1
position: 363417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363345-363417:1:exon

trnar-ucg
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnar-ucg
product: tRNA-Sec
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon UCG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:363378..363380,aa:Sec,seq:tca)
SIO_010081: trnar-ucg
subclass of: SO_0000673
so part of: trnar-ucg
location: 363345..363417
location: region:363345-363417:1
so has part: feature:363345-363417:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:363345-363417:1:exon

LOC117405000
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117405000
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(367676..367791)
location: region:367676-367791:-1
so has part: feature:367676-367791:-1:exon
subclass of: SO_0000623

117405000
type: Gene
SIO_000068: ncbigene

position:367676:-1
position: 367676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367791:-1
position: 367791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367676-367791:-1:exon

LOC117405000
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117405000
product: U5 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00020
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004544807.2
SIO_010081: LOC117405000
subclass of: SO_0000673
so part of: LOC117405000
location: complement(367676..367791)
location: region:367676-367791:-1
so has part: feature:367676-367791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367676-367791:-1:exon

trnar-ucg
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnar-ucg
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 372785..372857
location: region:372785-372857:1
so has part: feature:372785-372857:1:exon
subclass of: SO_0000663

117405044
type: Gene
SIO_000068: ncbigene

position:372785:1
position: 372785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372857:1
position: 372857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372785-372857:1:exon

trnar-ucg
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnar-ucg
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon UCG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:372818..372820,aa:Arg,seq:tcg)
SIO_010081: trnar-ucg
subclass of: SO_0000673
so part of: trnar-ucg
location: 372785..372857
location: region:372785-372857:1
so has part: feature:372785-372857:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:372785-372857:1:exon

trnar-ucg
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnar-ucg
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 373952..374024
location: region:373952-374024:1
so has part: feature:373952-374024:1:exon
subclass of: SO_0000663

117405065
type: Gene
SIO_000068: ncbigene

position:373952:1
position: 373952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374024:1
position: 374024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373952-374024:1:exon

trnar-ucg
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnar-ucg
product: tRNA-Sec
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon UCG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:373985..373987,aa:Sec,seq:tca)
SIO_010081: trnar-ucg
subclass of: SO_0000673
so part of: trnar-ucg
location: 373952..374024
location: region:373952-374024:1
so has part: feature:373952-374024:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:373952-374024:1:exon

trnar-ucg
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnar-ucg
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 376147..376219
location: region:376147-376219:1
so has part: feature:376147-376219:1:exon
subclass of: SO_0000663

117965925
type: Gene
SIO_000068: ncbigene

position:376147:1
position: 376147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376219:1
position: 376219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376147-376219:1:exon

trnar-ucg
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnar-ucg
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon UCG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:376180..376182,aa:Arg,seq:tcg)
SIO_010081: trnar-ucg
subclass of: SO_0000673
so part of: trnar-ucg
location: 376147..376219
location: region:376147-376219:1
so has part: feature:376147-376219:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:376147-376219:1:exon

LOC117414435
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117414435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(423573..453478)
location: region:423573-453478:-1
so has part: feature:423573-453478:-1:exon
subclass of: SO_0000010

117414435
type: Gene
SIO_000068: ncbigene

position:423573:-1
position: 423573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453478:-1
position: 453478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423573-453478:-1:exon

LOC117414435
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117414435
product: flagellar attachment zone protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034910965.1
SIO_010081: LOC117414435
subclass of: SO_0000673
so part of: LOC117414435
location: complement(join(423573..424017,424323..424420,429674..430692,453295..453478))
location: region:423573-453478:-1
so has part: feature:453295-453478:-1:exon
so has part: feature:429674-430692:-1:exon
so has part: feature:424323-424420:-1:exon
so has part: feature:423573-424017:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453295-453478:-1:exon

position:453295:-1
position: 453295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:429674-430692:-1:exon

position:429674:-1
position: 429674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430692:-1
position: 430692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:424323-424420:-1:exon

position:424323:-1
position: 424323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424420:-1
position: 424420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:423573-424017:-1:exon

position:424017:-1
position: 424017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117414435
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117414435
product: flagellar attachment zone protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034024183.2
SIO_010081: LOC117414435
subclass of: SO_0000673
so part of: LOC117414435
location: complement(join(423573..424017,424323..424420,429674..430692,431139..431290))
location: region:423573-431290:-1
so has part: feature:431139-431290:-1:exon
so has part: feature:429674-430692:-1:exon
so has part: feature:424323-424420:-1:exon
so has part: feature:423573-424017:-1:exon

position:431290:-1
position: 431290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431139-431290:-1:exon

position:431139:-1
position: 431139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:429674-430692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424323-424420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:423573-424017:-1:exon

LOC117414435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117414435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: flagellar attachment zone protein 1-like
translation: MEKIDAKIFTLQFNNMKFAKGRNETWLCQILCKNEEAPDFKVYQNSYWEDEMSKLAEEMLKHAEDTSNNTEKNPKLRQEMLKAAEGMLKLKDKMADMTKRAAEMIKHATEMSKHAAEMSKHAAEMSKHAAEMSKLIGKMVAFPGKMSKYAEELRKLAEQMSKLPAKMPKHADEIMNLARMSELIKEMKTLAEFVFKKMSEYTEEMSKLAEEIAKLAEEKPRLAEEMDNLTYEMRKLKDKMLNVQEKIPMHADEICLWKNESKIQGTGSYKITWFISWSPCASCALQIIEFVEKHTNVSLNIFASRLYYYQYESHKEGFRKLAGHERIGLKVMTVKEFQDCFQQFVGFQKWDDLDENSEFYAEELRSITGSDPEMPFEVPYSVCGVCLDY
SIO_010081: LOC117414435
subclass of: SO_0000673
so part of: LOC117414435
location: complement(join(423952..424017,424323..424420,429674..430679))
location: region:423952-430679:-1
so has part: feature:429674-430679:-1:exon
so has part: feature:424323-424420:-1:exon
so has part: feature:423952-424017:-1:exon

XP_033880074.2
type: Protein
SIO_000068: ncbiprotein

position:423952:-1
position: 423952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430679:-1
position: 430679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429674-430679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424323-424420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423952-424017:-1:exon

LOC117414435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117414435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: flagellar attachment zone protein 1-like
translation: MEKIDAKIFTLQFNNMKFAKGRNETWLCQILCKNEEAPDFKVYQNSYWEDEMSKLAEEMLKHAEDTSNNTEKNPKLRQEMLKAAEGMLKLKDKMADMTKRAAEMIKHATEMSKHAAEMSKHAAEMSKHAAEMSKLIGKMVAFPGKMSKYAEELRKLAEQMSKLPAKMPKHADEIMNLARMSELIKEMKTLAEFVFKKMSEYTEEMSKLAEEIAKLAEEKPRLAEEMDNLTYEMRKLKDKMLNVQEKIPMHADEICLWKNESKIQGTGSYKITWFISWSPCASCALQIIEFVEKHTNVSLNIFASRLYYYQYESHKEGFRKLAGHERIGLKVMTVKEFQDCFQQFVGFQKWDDLDENSEFYAEELRSITGSDPEMPFEVPYSVCGVCLDY
SIO_010081: LOC117414435
subclass of: SO_0000673
so part of: LOC117414435
location: complement(join(423952..424017,424323..424420,429674..430679))
location: region:423952-430679:-1
so has part: feature:429674-430679:-1:exon
so has part: feature:424323-424420:-1:exon
so has part: feature:423952-424017:-1:exon

XP_034766856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429674-430679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424323-424420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423952-424017:-1:exon

LOC117965838
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965838
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(510059..511044)
location: region:510059-511044:-1
so has part: feature:510059-511044:-1:exon
subclass of: SO_0000010

117965838
type: Gene
SIO_000068: ncbigene

position:510059:-1
position: 510059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511044:-1
position: 511044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510059-511044:-1:exon

LOC117965838
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965838
product: endonuclease domain-containing 1 protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034910991.1
SIO_010081: LOC117965838
subclass of: SO_0000673
so part of: LOC117965838
location: complement(join(510059..510480,510710..511044))
location: region:510059-511044:-1
so has part: feature:510710-511044:-1:exon
so has part: feature:510059-510480:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510710-511044:-1:exon

position:510710:-1
position: 510710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:510059-510480:-1:exon

position:510480:-1
position: 510480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965838
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965838
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endonuclease domain-containing 1 protein-like
translation: MGFVCGVFLLLTLPALARTEVVNDFKVCKDFFLESKAPTVQLDQNRYKRICQKYKNKYEFATLYDTTNRIPVYSAYTYSDCDEGERKKKKWAIEPQLDLGSGSGEMALENTVKGAGDKQALDKDYKTIEDSNTPDGYNRGHLFPVCHAESQSAKDATFTLTNIVPQNVEFNGGAWAITERFVRDNIRKVHT
SIO_010081: LOC117965838
subclass of: SO_0000673
so part of: LOC117965838
location: complement(join(510193..510480,510710..510997))
location: region:510193-510997:-1
so has part: feature:510710-510997:-1:exon
so has part: feature:510193-510480:-1:exon

XP_034766882.1
type: Protein
SIO_000068: ncbiprotein

position:510193:-1
position: 510193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510997:-1
position: 510997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510710-510997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510193-510480:-1:exon

LOC117404733
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 573894..580366
location: region:573894-580366:1
so has part: feature:573894-580366:1:exon
subclass of: SO_0000010

117404733
type: Gene
SIO_000068: ncbigene

position:573894:1
position: 573894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580366:1
position: 580366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573894-580366:1:exon

LOC117404733
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404733
product: zona pellucida sperm-binding protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034910966.1
SIO_010081: LOC117404733
subclass of: SO_0000673
so part of: LOC117404733
location: join(573894..574082,576602..576777,577114..577220,577580..577671,577899..578079,578318..578426,578635..578726,579341..579426,579784..579897,580206..580366)
location: region:573894-580366:1
so has part: feature:573894-574082:1:exon
so has part: feature:576602-576777:1:exon
so has part: feature:577114-577220:1:exon
so has part: feature:577580-577671:1:exon
so has part: feature:577899-578079:1:exon
so has part: feature:578318-578426:1:exon
so has part: feature:578635-578726:1:exon
so has part: feature:579341-579426:1:exon
so has part: feature:579784-579897:1:exon
so has part: feature:580206-580366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:573894-574082:1:exon

position:574082:1
position: 574082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:576602-576777:1:exon

position:576602:1
position: 576602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576777:1
position: 576777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:577114-577220:1:exon

position:577114:1
position: 577114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577220:1
position: 577220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:577580-577671:1:exon

position:577580:1
position: 577580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577671:1
position: 577671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:577899-578079:1:exon

position:577899:1
position: 577899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578079:1
position: 578079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:578318-578426:1:exon

position:578318:1
position: 578318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578426:1
position: 578426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:578635-578726:1:exon

position:578635:1
position: 578635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578726:1
position: 578726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:579341-579426:1:exon

position:579341:1
position: 579341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579426:1
position: 579426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:579784-579897:1:exon

position:579784:1
position: 579784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579897:1
position: 579897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:580206-580366:1:exon

position:580206:1
position: 580206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117404733
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zona pellucida sperm-binding protein 3-like
translation: MELFLSSVLLALCCIPFAAPQDAGTVVCGVDSVSVRVLLNIGQALPLDPKGFLLGSCSPSTSSYNTVQFQSGLLDCRFMRMVNSSIISYMNVLTYQPTQSGFYQTPFTQAIVCTYTKLAGWTPPVYNPALGDASGFGKLEFTMGFMNEEFSAPRTSSLFFLGSPINIAAAVKQQFHMPLMVYVEECVAASTPQLSPSSQTYPLIANHGCFVDGQAASSRFLPRVQTSEIRFVVQAFKFTQLNADVYIHCQLLAWDPAQLSNPTKKACSFNQRSRSWELLDNPGRSSVCSCCTSNCNKRKRRDTAEEGLRHTAVLGPLRILPEELSAGNQEFYQRIPALSLDEPKQALAWLPVLAAPLLLMVVLGALSLGYYMCVWHQPRLCSKSSSELLIPAPH
SIO_010081: LOC117404733
subclass of: SO_0000673
so part of: LOC117404733
location: join(574016..574082,576602..576777,577114..577220,577580..577671,577899..578079,578318..578426,578635..578726,579341..579426,579784..579897,580206..580366)
location: region:574016-580366:1
so has part: feature:574016-574082:1:exon
so has part: feature:576602-576777:1:exon
so has part: feature:577114-577220:1:exon
so has part: feature:577580-577671:1:exon
so has part: feature:577899-578079:1:exon
so has part: feature:578318-578426:1:exon
so has part: feature:578635-578726:1:exon
so has part: feature:579341-579426:1:exon
so has part: feature:579784-579897:1:exon
so has part: feature:580206-580366:1:exon

XP_034766857.1
type: Protein
SIO_000068: ncbiprotein

position:574016:1
position: 574016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574016-574082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:576602-576777:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577114-577220:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577580-577671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577899-578079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:578318-578426:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578635-578726:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579341-579426:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:579784-579897:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:580206-580366:1:exon

LOC117965851
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965851
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 587452..592229
location: region:587452-592229:1
so has part: feature:587452-592229:1:exon
subclass of: SO_0000011

117965851
type: Gene
SIO_000068: ncbigene

position:587452:1
position: 587452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592229:1
position: 592229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587452-592229:1:exon

LOC117965851
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965851
product: uncharacterized LOC117965851
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004661542.1
SIO_010081: LOC117965851
subclass of: SO_0000673
so part of: LOC117965851
location: join(587452..587944,591519..591654,591813..592229)
location: region:587452-592229:1
so has part: feature:587452-587944:1:exon
so has part: feature:591519-591654:1:exon
so has part: feature:591813-592229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:587452-587944:1:exon

position:587944:1
position: 587944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:591519-591654:1:exon

position:591519:1
position: 591519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591654:1
position: 591654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:591813-592229:1:exon

position:591813:1
position: 591813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117415449
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117415449
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 614249..615023
location: region:614249-615023:1
so has part: feature:614249-615023:1:exon
subclass of: SO_0000011

117415449
type: Gene
SIO_000068: ncbigene

position:614249:1
position: 614249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615023:1
position: 615023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614249-615023:1:exon

LOC117415449
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117415449
product: uncharacterized LOC117415449
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004661547.1
SIO_010081: LOC117415449
subclass of: SO_0000673
so part of: LOC117415449
location: join(614249..614335,614519..614608,614719..614844,614974..615023)
location: region:614249-615023:1
so has part: feature:614249-614335:1:exon
so has part: feature:614519-614608:1:exon
so has part: feature:614719-614844:1:exon
so has part: feature:614974-615023:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:614249-614335:1:exon

position:614335:1
position: 614335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:614519-614608:1:exon

position:614519:1
position: 614519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614608:1
position: 614608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:614719-614844:1:exon

position:614719:1
position: 614719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614844:1
position: 614844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:614974-615023:1:exon

position:614974:1
position: 614974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnaf-gaa
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnaf-gaa
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(628487..628559)
location: region:628487-628559:-1
so has part: feature:628487-628559:-1:exon
subclass of: SO_0000663

117415670
type: Gene
SIO_000068: ncbigene

position:628487:-1
position: 628487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628559:-1
position: 628559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628487-628559:-1:exon

trnaf-gaa
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnaf-gaa
product: tRNA-Phe
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA phenylalanine (anticodon GAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(628524..628526),aa:Phe,seq:gaa)
SIO_010081: trnaf-gaa
subclass of: SO_0000673
so part of: trnaf-gaa
location: complement(628487..628559)
location: region:628487-628559:-1
so has part: feature:628487-628559:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:628487-628559:-1:exon

trnaw-cca
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnaw-cca
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(629171..629242)
location: region:629171-629242:-1
so has part: feature:629171-629242:-1:exon
subclass of: SO_0000663

117415665
type: Gene
SIO_000068: ncbigene

position:629171:-1
position: 629171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629242:-1
position: 629242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629171-629242:-1:exon

trnaw-cca
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnaw-cca
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tryptophan (anticodon CCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(629208..629210),aa:Trp,seq:cca)
SIO_010081: trnaw-cca
subclass of: SO_0000673
so part of: trnaw-cca
location: complement(629171..629242)
location: region:629171-629242:-1
so has part: feature:629171-629242:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:629171-629242:-1:exon

trnam-cau
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnam-cau
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 639537..639609
location: region:639537-639609:1
so has part: feature:639537-639609:1:exon
subclass of: SO_0000663

117965926
type: Gene
SIO_000068: ncbigene

position:639537:1
position: 639537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639609:1
position: 639609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639537-639609:1:exon

trnam-cau
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnam-cau
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:639570..639572,aa:Met,seq:cat)
SIO_010081: trnam-cau
subclass of: SO_0000673
so part of: trnam-cau
location: 639537..639609
location: region:639537-639609:1
so has part: feature:639537-639609:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:639537-639609:1:exon

trnav-aac
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnav-aac
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 639976..640048
location: region:639976-640048:1
so has part: feature:639976-640048:1:exon
subclass of: SO_0000663

117965927
type: Gene
SIO_000068: ncbigene

position:639976:1
position: 639976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640048:1
position: 640048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639976-640048:1:exon

trnav-aac
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnav-aac
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:640009..640011,aa:Val,seq:aac)
SIO_010081: trnav-aac
subclass of: SO_0000673
so part of: trnav-aac
location: 639976..640048
location: region:639976-640048:1
so has part: feature:639976-640048:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:639976-640048:1:exon

trnam-cau
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnam-cau
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(641402..641474)
location: region:641402-641474:-1
so has part: feature:641402-641474:-1:exon
subclass of: SO_0000663

117431884
type: Gene
SIO_000068: ncbigene

position:641402:-1
position: 641402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641474:-1
position: 641474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641402-641474:-1:exon

trnam-cau
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnam-cau
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(641439..641441),aa:Met,seq:cat)
SIO_010081: trnam-cau
subclass of: SO_0000673
so part of: trnam-cau
location: complement(641402..641474)
location: region:641402-641474:-1
so has part: feature:641402-641474:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:641402-641474:-1:exon

trnav-cac
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnav-cac
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(641869..641941)
location: region:641869-641941:-1
so has part: feature:641869-641941:-1:exon
subclass of: SO_0000663

117431885
type: Gene
SIO_000068: ncbigene

position:641869:-1
position: 641869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641941:-1
position: 641941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641869-641941:-1:exon

trnav-cac
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnav-cac
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(641906..641908),aa:Val,seq:cac)
SIO_010081: trnav-cac
subclass of: SO_0000673
so part of: trnav-cac
location: complement(641869..641941)
location: region:641869-641941:-1
so has part: feature:641869-641941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:641869-641941:-1:exon

trnad-guc
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnad-guc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(642667..642738)
location: region:642667-642738:-1
so has part: feature:642667-642738:-1:exon
subclass of: SO_0000663

117965935
type: Gene
SIO_000068: ncbigene

position:642667:-1
position: 642667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642738:-1
position: 642738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642667-642738:-1:exon

trnad-guc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnad-guc
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(642703..642705),aa:Asp,seq:gtc)
SIO_010081: trnad-guc
subclass of: SO_0000673
so part of: trnad-guc
location: complement(642667..642738)
location: region:642667-642738:-1
so has part: feature:642667-642738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:642667-642738:-1:exon

trnad-guc
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnad-guc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(657174..657245)
location: region:657174-657245:-1
so has part: feature:657174-657245:-1:exon
subclass of: SO_0000663

117965936
type: Gene
SIO_000068: ncbigene

position:657174:-1
position: 657174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657245:-1
position: 657245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657174-657245:-1:exon

trnad-guc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnad-guc
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(657210..657212),aa:Asp,seq:gtc)
SIO_010081: trnad-guc
subclass of: SO_0000673
so part of: trnad-guc
location: complement(657174..657245)
location: region:657174-657245:-1
so has part: feature:657174-657245:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:657174-657245:-1:exon

LOC117965911
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965911
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(657757..657871)
location: region:657757-657871:-1
so has part: feature:657757-657871:-1:exon
subclass of: SO_0000623

117965911
type: Gene
SIO_000068: ncbigene

position:657757:-1
position: 657757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657871:-1
position: 657871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657757-657871:-1:exon

LOC117965911
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: snRNA
gene: LOC117965911
product: U5 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00020
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004661583.1
SIO_010081: LOC117965911
subclass of: SO_0000673
so part of: LOC117965911
location: complement(657757..657871)
location: region:657757-657871:-1
so has part: feature:657757-657871:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:657757-657871:-1:exon

trnav-cac
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnav-cac
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 662991..663063
location: region:662991-663063:1
so has part: feature:662991-663063:1:exon
subclass of: SO_0000663

117431892
type: Gene
SIO_000068: ncbigene

position:662991:1
position: 662991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663063:1
position: 663063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662991-663063:1:exon

trnav-cac
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnav-cac
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:663024..663026,aa:Val,seq:cac)
SIO_010081: trnav-cac
subclass of: SO_0000673
so part of: trnav-cac
location: 662991..663063
location: region:662991-663063:1
so has part: feature:662991-663063:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662991-663063:1:exon

trnam-cau
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnam-cau
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 663455..663527
location: region:663455-663527:1
so has part: feature:663455-663527:1:exon
subclass of: SO_0000663

117431891
type: Gene
SIO_000068: ncbigene

position:663455:1
position: 663455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663527:1
position: 663527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663455-663527:1:exon

trnam-cau
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnam-cau
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:663488..663490,aa:Thr,seq:cgt)
SIO_010081: trnam-cau
subclass of: SO_0000673
so part of: trnam-cau
location: 663455..663527
location: region:663455-663527:1
so has part: feature:663455-663527:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663455-663527:1:exon

trnav-aac
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnav-aac
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(664868..664940)
location: region:664868-664940:-1
so has part: feature:664868-664940:-1:exon
subclass of: SO_0000663

117431866
type: Gene
SIO_000068: ncbigene

position:664868:-1
position: 664868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664940:-1
position: 664940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664868-664940:-1:exon

trnav-aac
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnav-aac
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(664905..664907),aa:Val,seq:aac)
SIO_010081: trnav-aac
subclass of: SO_0000673
so part of: trnav-aac
location: complement(664868..664940)
location: region:664868-664940:-1
so has part: feature:664868-664940:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:664868-664940:-1:exon

trnam-cau
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnam-cau
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(665310..665382)
location: region:665310-665382:-1
so has part: feature:665310-665382:-1:exon
subclass of: SO_0000663

117431864
type: Gene
SIO_000068: ncbigene

position:665310:-1
position: 665310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665382:-1
position: 665382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665310-665382:-1:exon

trnam-cau
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnam-cau
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(665347..665349),aa:Met,seq:cat)
SIO_010081: trnam-cau
subclass of: SO_0000673
so part of: trnam-cau
location: complement(665310..665382)
location: region:665310-665382:-1
so has part: feature:665310-665382:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:665310-665382:-1:exon

LOC117431357
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117431357
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(666710..668202)
location: region:666710-668202:-1
so has part: feature:666710-668202:-1:exon
subclass of: SO_0000010

117431357
type: Gene
SIO_000068: ncbigene

position:666710:-1
position: 666710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668202:-1
position: 668202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666710-668202:-1:exon

LOC117431357
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117431357
product: protein Red-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911011.1
SIO_010081: LOC117431357
subclass of: SO_0000673
so part of: LOC117431357
location: complement(join(666710..666763,667287..667395,667540..667625,667758..667815,668026..668202))
location: region:666710-668202:-1
so has part: feature:668026-668202:-1:exon
so has part: feature:667758-667815:-1:exon
so has part: feature:667540-667625:-1:exon
so has part: feature:667287-667395:-1:exon
so has part: feature:666710-666763:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:668026-668202:-1:exon

position:668026:-1
position: 668026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:667758-667815:-1:exon

position:667758:-1
position: 667758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667815:-1
position: 667815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:667540-667625:-1:exon

position:667540:-1
position: 667540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667625:-1
position: 667625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:667287-667395:-1:exon

position:667287:-1
position: 667287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667395:-1
position: 667395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:666710-666763:-1:exon

position:666763:-1
position: 666763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117431357
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117431357
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Red-like
translation: MYYYCCCAVFSLTPSTAGTKREEKKHLGDFFGMSNSYAECYPATMDDLAVDSDDEVDYSKMDQGNKKGPLGRWDFDTQEYSDYMNNKEALPKAAFQYGINMSEGRKTRRFKETNEKAELDRQWKKISAGSSEETKILKTPTAHLC
SIO_010081: LOC117431357
subclass of: SO_0000673
so part of: LOC117431357
location: complement(join(666710..666763,667287..667395,667540..667625,667758..667815,668026..668156))
location: region:666710-668156:-1
so has part: feature:668026-668156:-1:exon
so has part: feature:667758-667815:-1:exon
so has part: feature:667540-667625:-1:exon
so has part: feature:667287-667395:-1:exon
so has part: feature:666710-666763:-1:exon

XP_034766902.1
type: Protein
SIO_000068: ncbiprotein

position:668156:-1
position: 668156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668026-668156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:667758-667815:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667540-667625:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667287-667395:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:666710-666763:-1:exon

LOC117965848
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(666717..667582)
location: region:666717-667582:-1
so has part: feature:666717-667582:-1:exon
subclass of: SO_0000011

117965848
type: Gene
SIO_000068: ncbigene

position:666717:-1
position: 666717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667582:-1
position: 667582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666717-667582:-1:exon

LOC117965848
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965848
product: uncharacterized LOC117965848
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004661537.1
SIO_010081: LOC117965848
subclass of: SO_0000673
so part of: LOC117965848
location: complement(join(666717..666763,667013..667047,667287..667395,667540..667582))
location: region:666717-667582:-1
so has part: feature:667540-667582:-1:exon
so has part: feature:667287-667395:-1:exon
so has part: feature:667013-667047:-1:exon
so has part: feature:666717-666763:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:667540-667582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:667287-667395:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667013-667047:-1:exon

position:667013:-1
position: 667013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667047:-1
position: 667047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:666717-666763:-1:exon

trnam-cau
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnam-cau
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(668994..669066)
location: region:668994-669066:-1
so has part: feature:668994-669066:-1:exon
subclass of: SO_0000663

117431863
type: Gene
SIO_000068: ncbigene

position:668994:-1
position: 668994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669066:-1
position: 669066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668994-669066:-1:exon

trnam-cau
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnam-cau
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(669031..669033),aa:Met,seq:cat)
SIO_010081: trnam-cau
subclass of: SO_0000673
so part of: trnam-cau
location: complement(668994..669066)
location: region:668994-669066:-1
so has part: feature:668994-669066:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:668994-669066:-1:exon

trnal-uaa
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnal-uaa
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(669616..669700)
location: region:669616-669700:-1
so has part: feature:669616-669700:-1:exon
subclass of: SO_0000663

117965937
type: Gene
SIO_000068: ncbigene

position:669616:-1
position: 669616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669700:-1
position: 669700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669616-669700:-1:exon

trnal-uaa
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnal-uaa
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon UAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(669665..669667),aa:Leu,seq:taa)
SIO_010081: trnal-uaa
subclass of: SO_0000673
so part of: trnal-uaa
location: complement(669616..669700)
location: region:669616-669700:-1
so has part: feature:669616-669700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:669616-669700:-1:exon

LOC117965868
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 714552..721432
location: region:714552-721432:1
so has part: feature:714552-721432:1:exon
subclass of: SO_0000011

117965868
type: Gene
SIO_000068: ncbigene

position:714552:1
position: 714552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721432:1
position: 721432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:714552-721432:1:exon

LOC117965868
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965868
product: uncharacterized LOC117965868
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004661570.1
SIO_010081: LOC117965868
subclass of: SO_0000673
so part of: LOC117965868
location: join(714552..714565,717484..717504,719051..719071,720163..720183,721412..721432)
location: region:714552-721432:1
so has part: feature:714552-714565:1:exon
so has part: feature:717484-717504:1:exon
so has part: feature:719051-719071:1:exon
so has part: feature:720163-720183:1:exon
so has part: feature:721412-721432:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:714552-714565:1:exon

position:714565:1
position: 714565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:717484-717504:1:exon

position:717484:1
position: 717484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717504:1
position: 717504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:719051-719071:1:exon

position:719051:1
position: 719051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719071:1
position: 719071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:720163-720183:1:exon

position:720163:1
position: 720163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720183:1
position: 720183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:721412-721432:1:exon

position:721412:1
position: 721412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117407846
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117407846
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(749492..766679)
location: region:749492-766679:-1
so has part: feature:749492-766679:-1:exon
subclass of: SO_0000011

117407846
type: Gene
SIO_000068: ncbigene

position:749492:-1
position: 749492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766679:-1
position: 766679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749492-766679:-1:exon

LOC117407846
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117407846
product: uncharacterized LOC117407846, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004661554.1
SIO_010081: LOC117407846
subclass of: SO_0000673
so part of: LOC117407846
location: complement(join(749492..749675,763855..763952,766488..766679))
location: region:749492-766679:-1
so has part: feature:766488-766679:-1:exon
so has part: feature:763855-763952:-1:exon
so has part: feature:749492-749675:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:766488-766679:-1:exon

position:766488:-1
position: 766488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:763855-763952:-1:exon

position:763855:-1
position: 763855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763952:-1
position: 763952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:749492-749675:-1:exon

position:749675:-1
position: 749675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117407846
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117407846
product: uncharacterized LOC117407846, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004661553.1
SIO_010081: LOC117407846
subclass of: SO_0000673
so part of: LOC117407846
location: complement(join(749492..749675,763855..763952,764460..764606))
location: region:749492-764606:-1
so has part: feature:764460-764606:-1:exon
so has part: feature:763855-763952:-1:exon
so has part: feature:749492-749675:-1:exon

position:764606:-1
position: 764606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:764460-764606:-1:exon

position:764460:-1
position: 764460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:763855-763952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:749492-749675:-1:exon

LOC117965820
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965820
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 826487..854610
location: region:826487-854610:1
so has part: feature:826487-854610:1:exon
subclass of: SO_0000010

117965820
type: Gene
SIO_000068: ncbigene

position:826487:1
position: 826487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854610:1
position: 854610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826487-854610:1:exon

LOC117965820
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965820
product: zinc finger protein 397-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034910951.1
SIO_010081: LOC117965820
subclass of: SO_0000673
so part of: LOC117965820
location: join(826487..827423,849154..849501,853499..854610)
location: region:826487-854610:1
so has part: feature:826487-827423:1:exon
so has part: feature:849154-849501:1:exon
so has part: feature:853499-854610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:826487-827423:1:exon

position:827423:1
position: 827423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:849154-849501:1:exon

position:849154:1
position: 849154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849501:1
position: 849501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:853499-854610:1:exon

position:853499:1
position: 853499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965820
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 397-like
translation: MDLRISVSHFKGELVPTIEQAVKAAVDVVVCELAKLIDSKLVDFQIEMEKENASLKMRLEMSDNEVNVMRGYLNTAGISLLNSNCNKQTSRKNNSEIFALPGRGSGNITTDSCVPLFNDKVNTAVGESSIGFARCLSTTKRDCISNPVPSIEIRDPVHAINRDCRAKQQDIAQSEQELLIRVHDYEPVSDTWIPEWGRTVKGTEDETCLPDTENKAKTESVQIIEVTVGGELTELVSEVEPGCIKQEALEQQSGSEETCSIIEEGTDLGSILGRPHSTRLHTSTGNCRSTLALADSPVELSHSNEGERRMPSTSRTALDTKEQHGSCILSHHNLSYKQQQGMQVGKTHQEDYWQSMRTETVRFQNSSLPQLDLPFVKGTTQRMCSLETPETSNGKKSSQLENLSRHLGTQAGKRWFCNVCRKSFRHLVAYRQHQRVHVRETPHRCNECGISFARVENLKVHQQIHTGGKLYHCIECGQSFSLFESYKQHQRVHTGETNRCSVCGKSFSRSANLKRHQLIHTGEKPFRCTQCGQMFRHSGAFKRHQRLHT
SIO_010081: LOC117965820
subclass of: SO_0000673
so part of: LOC117965820
location: join(826820..827423,849154..849501,853499..854196)
location: region:826820-854196:1
so has part: feature:826820-827423:1:exon
so has part: feature:849154-849501:1:exon
so has part: feature:853499-854196:1:exon

XP_034766842.1
type: Protein
SIO_000068: ncbiprotein

position:826820:1
position: 826820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854196:1
position: 854196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826820-827423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:849154-849501:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:853499-854196:1:exon

trnag-ucc
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnag-ucc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 878893..878964
location: region:878893-878964:1
so has part: feature:878893-878964:1:exon
subclass of: SO_0000663

117965928
type: Gene
SIO_000068: ncbigene

position:878893:1
position: 878893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878964:1
position: 878964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:878893-878964:1:exon

trnag-ucc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnag-ucc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:878926..878928,aa:Gly,seq:tcc)
SIO_010081: trnag-ucc
subclass of: SO_0000673
so part of: trnag-ucc
location: 878893..878964
location: region:878893-878964:1
so has part: feature:878893-878964:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:878893-878964:1:exon

trnah-gug
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnah-gug
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 880954..881025
location: region:880954-881025:1
so has part: feature:880954-881025:1:exon
subclass of: SO_0000663

117408222
type: Gene
SIO_000068: ncbigene

position:880954:1
position: 880954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881025:1
position: 881025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880954-881025:1:exon

trnah-gug
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnah-gug
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:880987..880989,aa:His,seq:gtg)
SIO_010081: trnah-gug
subclass of: SO_0000673
so part of: trnah-gug
location: 880954..881025
location: region:880954-881025:1
so has part: feature:880954-881025:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:880954-881025:1:exon

trnag-ucc
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnag-ucc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 881346..881417
location: region:881346-881417:1
so has part: feature:881346-881417:1:exon
subclass of: SO_0000663

117408223
type: Gene
SIO_000068: ncbigene

position:881346:1
position: 881346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881417:1
position: 881417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881346-881417:1:exon

trnag-ucc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnag-ucc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:881379..881381,aa:Gly,seq:tcc)
SIO_010081: trnag-ucc
subclass of: SO_0000673
so part of: trnag-ucc
location: 881346..881417
location: region:881346-881417:1
so has part: feature:881346-881417:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:881346-881417:1:exon

trnag-ucc
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnag-ucc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 883788..883859
location: region:883788-883859:1
so has part: feature:883788-883859:1:exon
subclass of: SO_0000663

117965929
type: Gene
SIO_000068: ncbigene

position:883788:1
position: 883788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883859:1
position: 883859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:883788-883859:1:exon

trnag-ucc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnag-ucc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:883821..883823,aa:Gly,seq:tcc)
SIO_010081: trnag-ucc
subclass of: SO_0000673
so part of: trnag-ucc
location: 883788..883859
location: region:883788-883859:1
so has part: feature:883788-883859:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:883788-883859:1:exon

trnah-gug
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnah-gug
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 885851..885922
location: region:885851-885922:1
so has part: feature:885851-885922:1:exon
subclass of: SO_0000663

117408226
type: Gene
SIO_000068: ncbigene

position:885851:1
position: 885851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885922:1
position: 885922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885851-885922:1:exon

trnah-gug
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnah-gug
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:885884..885886,aa:His,seq:gtg)
SIO_010081: trnah-gug
subclass of: SO_0000673
so part of: trnah-gug
location: 885851..885922
location: region:885851-885922:1
so has part: feature:885851-885922:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:885851-885922:1:exon

trnag-ucc
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnag-ucc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 886238..886309
location: region:886238-886309:1
so has part: feature:886238-886309:1:exon
subclass of: SO_0000663

117408227
type: Gene
SIO_000068: ncbigene

position:886238:1
position: 886238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886309:1
position: 886309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:886238-886309:1:exon

trnag-ucc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnag-ucc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:886271..886273,aa:Gly,seq:tcc)
SIO_010081: trnag-ucc
subclass of: SO_0000673
so part of: trnag-ucc
location: 886238..886309
location: region:886238-886309:1
so has part: feature:886238-886309:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:886238-886309:1:exon

trnah-gug
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnah-gug
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 888275..888346
location: region:888275-888346:1
so has part: feature:888275-888346:1:exon
subclass of: SO_0000663

117408228
type: Gene
SIO_000068: ncbigene

position:888275:1
position: 888275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888346:1
position: 888346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:888275-888346:1:exon

trnah-gug
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnah-gug
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:888308..888310,aa:His,seq:gtg)
SIO_010081: trnah-gug
subclass of: SO_0000673
so part of: trnah-gug
location: 888275..888346
location: region:888275-888346:1
so has part: feature:888275-888346:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:888275-888346:1:exon

LOC117407874
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117407874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 933233..1030015
location: region:933233-1030015:1
so has part: feature:933233-1030015:1:exon

117407874
type: Gene
SIO_000068: ncbigene

position:933233:1
position: 933233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030015:1
position: 1030015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933233-1030015:1:exon

LOC117407874
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407874
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117407874
subclass of: SO_0000673
so part of: LOC117407874
location: 933233..933328
location: region:933233-933328:1
so has part: feature:933233-933328:1:exon

position:933328:1
position: 933328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933233-933328:1:exon

LOC117407874
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407874
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117407874
subclass of: SO_0000673
so part of: LOC117407874
location: 1004661..1004772
location: region:1004661-1004772:1
so has part: feature:1004661-1004772:1:exon

position:1004661:1
position: 1004661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004772:1
position: 1004772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004661-1004772:1:exon

LOC117407874
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407874
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117407874
subclass of: SO_0000673
so part of: LOC117407874
location: 1008860..1008913
location: region:1008860-1008913:1
so has part: feature:1008860-1008913:1:exon

position:1008860:1
position: 1008860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008913:1
position: 1008913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1008860-1008913:1:exon

LOC117407874
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407874
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117407874
subclass of: SO_0000673
so part of: LOC117407874
location: 1010057..1010119
location: region:1010057-1010119:1
so has part: feature:1010057-1010119:1:exon

position:1010057:1
position: 1010057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010119:1
position: 1010119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010057-1010119:1:exon

LOC117407874
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407874
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117407874
subclass of: SO_0000673
so part of: LOC117407874
location: 1011387..1011520
location: region:1011387-1011520:1
so has part: feature:1011387-1011520:1:exon

position:1011387:1
position: 1011387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011520:1
position: 1011520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1011387-1011520:1:exon

LOC117407874
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407874
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117407874
subclass of: SO_0000673
so part of: LOC117407874
location: 1015085..1015177
location: region:1015085-1015177:1
so has part: feature:1015085-1015177:1:exon

position:1015085:1
position: 1015085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015177:1
position: 1015177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1015085-1015177:1:exon

LOC117407874
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407874
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117407874
subclass of: SO_0000673
so part of: LOC117407874
location: 1026830..1026880
location: region:1026830-1026880:1
so has part: feature:1026830-1026880:1:exon

position:1026830:1
position: 1026830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026880:1
position: 1026880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026830-1026880:1:exon

LOC117407874
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407874
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117407874
subclass of: SO_0000673
so part of: LOC117407874
location: 1028690..1028821
location: region:1028690-1028821:1
so has part: feature:1028690-1028821:1:exon

position:1028690:1
position: 1028690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028821:1
position: 1028821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028690-1028821:1:exon

LOC117407874
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407874
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 79% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117407874
subclass of: SO_0000673
so part of: LOC117407874
location: 1029408..1030015
location: region:1029408-1030015:1
so has part: feature:1029408-1030015:1:exon

position:1029408:1
position: 1029408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1029408-1030015:1:exon

LOC117965856
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1107735..1112296)
location: region:1107735-1112296:-1
so has part: feature:1107735-1112296:-1:exon
subclass of: SO_0000011

117965856
type: Gene
SIO_000068: ncbigene

position:1107735:-1
position: 1107735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112296:-1
position: 1112296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1107735-1112296:-1:exon

LOC117965856
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965856
product: uncharacterized LOC117965856
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004661549.1
SIO_010081: LOC117965856
subclass of: SO_0000673
so part of: LOC117965856
location: complement(join(1107735..1107897,1108095..1108183,1112145..1112186,1112279..1112296))
location: region:1107735-1112296:-1
so has part: feature:1112279-1112296:-1:exon
so has part: feature:1112145-1112186:-1:exon
so has part: feature:1108095-1108183:-1:exon
so has part: feature:1107735-1107897:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1112279-1112296:-1:exon

position:1112279:-1
position: 1112279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1112145-1112186:-1:exon

position:1112145:-1
position: 1112145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112186:-1
position: 1112186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1108095-1108183:-1:exon

position:1108095:-1
position: 1108095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108183:-1
position: 1108183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1107735-1107897:-1:exon

position:1107897:-1
position: 1107897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965879
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965879
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1132109..1154535)
location: region:1132109-1154535:-1
so has part: feature:1132109-1154535:-1:exon
subclass of: SO_0000010

117965879
type: Gene
SIO_000068: ncbigene

position:1132109:-1
position: 1132109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154535:-1
position: 1154535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132109-1154535:-1:exon

LOC117965879
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965879
product: C-type mannose receptor 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911012.1
SIO_010081: LOC117965879
subclass of: SO_0000673
so part of: LOC117965879
location: complement(join(1132109..1132619,1135060..1135101,1136259..1136489,1154172..1154535))
location: region:1132109-1154535:-1
so has part: feature:1154172-1154535:-1:exon
so has part: feature:1136259-1136489:-1:exon
so has part: feature:1135060-1135101:-1:exon
so has part: feature:1132109-1132619:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1154172-1154535:-1:exon

position:1154172:-1
position: 1154172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1136259-1136489:-1:exon

position:1136259:-1
position: 1136259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136489:-1
position: 1136489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1135060-1135101:-1:exon

position:1135060:-1
position: 1135060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135101:-1
position: 1135101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1132109-1132619:-1:exon

position:1132619:-1
position: 1132619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965879
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965879
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type mannose receptor 2-like
translation: MGLDYLEVDPGGAPVRENGSGAAVSPPSRPPEGVRGRRSRPSVHRARGGTPFCSTPPRSQRGVEACRPESRGGGSDPVSPTGPGSRQRATSRRPESPKKEEAVARERDSRSRRFPSPREGGTSENEEIVKKAQGKPFWIGLFNEPWKWSHQGDSYTFHNWSKGEPNNWGGSENCVMMSNTGGWNDYGCNNQLPFFCCEDSDPTSPPSTAVSQAGSPLPEELHLISHSMVWPEAWQYCKDRYTDLVSLTSLAAQNRVSELVRNSTVSRFWIGLHRTVVYDKWYWVAGKDKKAHLNYTNWAPGEPNNPYYEHCGEMVLREDGGAEWNDLCCYEQLPFICFKD
SIO_010081: LOC117965879
subclass of: SO_0000673
so part of: LOC117965879
location: complement(join(1132234..1132619,1135060..1135101,1136259..1136489,1154172..1154535))
location: region:1132234-1154535:-1
so has part: feature:1154172-1154535:-1:exon
so has part: feature:1136259-1136489:-1:exon
so has part: feature:1135060-1135101:-1:exon
so has part: feature:1132234-1132619:-1:exon

XP_034766903.1
type: Protein
SIO_000068: ncbiprotein

position:1132234:-1
position: 1132234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1154172-1154535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1136259-1136489:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1135060-1135101:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132234-1132619:-1:exon

LOC117965880
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1156393..1166111)
location: region:1156393-1166111:-1
so has part: feature:1156393-1166111:-1:exon
subclass of: SO_0000010

117965880
type: Gene
SIO_000068: ncbigene

position:1156393:-1
position: 1156393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166111:-1
position: 1166111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156393-1166111:-1:exon

LOC117965880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965880
product: 60 kDa lysophospholipase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911013.1
SIO_010081: LOC117965880
subclass of: SO_0000673
so part of: LOC117965880
location: complement(join(1156393..1156529,1163844..1163973,1164148..1164243,1166007..1166111))
location: region:1156393-1166111:-1
so has part: feature:1166007-1166111:-1:exon
so has part: feature:1164148-1164243:-1:exon
so has part: feature:1163844-1163973:-1:exon
so has part: feature:1156393-1156529:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1166007-1166111:-1:exon

position:1166007:-1
position: 1166007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1164148-1164243:-1:exon

position:1164148:-1
position: 1164148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164243:-1
position: 1164243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1163844-1163973:-1:exon

position:1163844:-1
position: 1163844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163973:-1
position: 1163973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1156393-1156529:-1:exon

position:1156529:-1
position: 1156529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60 kDa lysophospholipase-like
translation: MAAPIITGVVIRDKRFLRWVGETLEFRWLRNKDSEERKGLLEDLLPSLACGAVTGNDFLSLQEILSRVDVNCGDYDGTTPLHMAAICGNTDMVKFLLARGAEPTVRDRFGGPNWMVQWWHQHLPGVHQGLPTVDVVPPHREFLVQLGRGSTMAGK
SIO_010081: LOC117965880
subclass of: SO_0000673
so part of: LOC117965880
location: complement(join(1156393..1156529,1163844..1163973,1164148..1164243,1166007..1166111))
location: region:1156393-1166111:-1
so has part: feature:1166007-1166111:-1:exon
so has part: feature:1164148-1164243:-1:exon
so has part: feature:1163844-1163973:-1:exon
so has part: feature:1156393-1156529:-1:exon

XP_034766904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1166007-1166111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1164148-1164243:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1163844-1163973:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1156393-1156529:-1:exon

LOC117404705
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404705
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1214658..1221975)
location: region:1214658-1221975:-1
so has part: feature:1214658-1221975:-1:exon
subclass of: SO_0000010

117404705
type: Gene
SIO_000068: ncbigene

position:1214658:-1
position: 1214658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221975:-1
position: 1221975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1214658-1221975:-1:exon

LOC117404705
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404705
product: E3 ubiquitin-protein ligase TRIM39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034910988.1
SIO_010081: LOC117404705
subclass of: SO_0000673
so part of: LOC117404705
location: complement(join(1214658..1215626,1221655..1221681,1221824..1221975))
location: region:1214658-1221975:-1
so has part: feature:1221824-1221975:-1:exon
so has part: feature:1221655-1221681:-1:exon
so has part: feature:1214658-1215626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1221824-1221975:-1:exon

position:1221824:-1
position: 1221824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1221655-1221681:-1:exon

position:1221655:-1
position: 1221655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221681:-1
position: 1221681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1214658-1215626:-1:exon

position:1215626:-1
position: 1215626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117404705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404705
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: MILHLSVQNVIQLSSFTESMRPVPKSEWKWIISSAVDSLTLDPDTAHPMLILSEKRKQVRVGLLQPVHDNPERFDYLCCVLSREGFTSGRHYWQMNLGGNKFWRFGVSRESARRKGEFSMSPQQGYWTVGWRSGDEDKDAFIALTAPETPITRSLKPQKLGVYLDYEEGHLSFYNVETRSHIYTFTDMEFNPNEKLYPFFYTYSKTDLVLESPDPVSSAD
SIO_010081: LOC117404705
subclass of: SO_0000673
so part of: LOC117404705
location: complement(join(1215070..1215626,1221655..1221681,1221824..1221902))
location: region:1215070-1221902:-1
so has part: feature:1221824-1221902:-1:exon
so has part: feature:1221655-1221681:-1:exon
so has part: feature:1215070-1215626:-1:exon

XP_034766879.1
type: Protein
SIO_000068: ncbiprotein

position:1215070:-1
position: 1215070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221902:-1
position: 1221902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1221824-1221902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1221655-1221681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1215070-1215626:-1:exon

LOC117404746
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404746
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1318101..1319982
location: region:1318101-1319982:1
so has part: feature:1318101-1319982:1:exon
subclass of: SO_0000011

117404746
type: Gene
SIO_000068: ncbigene

position:1318101:1
position: 1318101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319982:1
position: 1319982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1318101-1319982:1:exon

LOC117404746
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117404746
product: uncharacterized LOC117404746
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004661556.1
SIO_010081: LOC117404746
subclass of: SO_0000673
so part of: LOC117404746
location: join(1318101..1318140,1318695..1318799,1319045..1319075,1319709..1319779,1319923..1319982)
location: region:1318101-1319982:1
so has part: feature:1318101-1318140:1:exon
so has part: feature:1318695-1318799:1:exon
so has part: feature:1319045-1319075:1:exon
so has part: feature:1319709-1319779:1:exon
so has part: feature:1319923-1319982:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1318101-1318140:1:exon

position:1318140:1
position: 1318140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1318695-1318799:1:exon

position:1318695:1
position: 1318695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1318799:1
position: 1318799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1319045-1319075:1:exon

position:1319045:1
position: 1319045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319075:1
position: 1319075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1319709-1319779:1:exon

position:1319709:1
position: 1319709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319779:1
position: 1319779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1319923-1319982:1:exon

position:1319923:1
position: 1319923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965859
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965859
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1363635..1370522)
location: region:1363635-1370522:-1
so has part: feature:1363635-1370522:-1:exon
subclass of: SO_0000011

117965859
type: Gene
SIO_000068: ncbigene

position:1363635:-1
position: 1363635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1370522:-1
position: 1370522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1363635-1370522:-1:exon

LOC117965859
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965859
product: uncharacterized LOC117965859
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004661555.1
SIO_010081: LOC117965859
subclass of: SO_0000673
so part of: LOC117965859
location: complement(join(1363635..1363674,1366959..1367037,1370503..1370522))
location: region:1363635-1370522:-1
so has part: feature:1370503-1370522:-1:exon
so has part: feature:1366959-1367037:-1:exon
so has part: feature:1363635-1363674:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1370503-1370522:-1:exon

position:1370503:-1
position: 1370503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1366959-1367037:-1:exon

position:1366959:-1
position: 1366959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367037:-1
position: 1367037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1363635-1363674:-1:exon

position:1363674:-1
position: 1363674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398406
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1413863..1421783)
location: region:1413863-1421783:-1
so has part: feature:1413863-1421783:-1:exon
subclass of: SO_0000010

117398406
type: Gene
SIO_000068: ncbigene

position:1413863:-1
position: 1413863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421783:-1
position: 1421783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1413863-1421783:-1:exon

LOC117398406
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398406
product: erythroblast NAD(P)(+)--arginine ADP-ribosyltransferase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033997409.2
SIO_010081: LOC117398406
subclass of: SO_0000673
so part of: LOC117398406
location: complement(join(1413863..1414364,1415042..1415726,1421461..1421565,1421664..1421783))
location: region:1413863-1421783:-1
so has part: feature:1421664-1421783:-1:exon
so has part: feature:1421461-1421565:-1:exon
so has part: feature:1415042-1415726:-1:exon
so has part: feature:1413863-1414364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1421664-1421783:-1:exon

position:1421664:-1
position: 1421664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1421461-1421565:-1:exon

position:1421461:-1
position: 1421461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421565:-1
position: 1421565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1415042-1415726:-1:exon

position:1415042:-1
position: 1415042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415726:-1
position: 1415726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1413863-1414364:-1:exon

position:1414364:-1
position: 1414364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398406
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: erythroblast NAD(P)(+)--arginine ADP-ribosyltransferase-like
translation: MALSVMKFSLGFFALLLAAQFVTPDLTDCPNSNILMDFADGTLDDQYNNCENEMLKKVKSEYLPAELEQDQTFRNAWNNAITAMNKKLHPDLTLEEAAAIHLYTMEEGRLHCKFNEAVRTGGADYTAFPYKSFHFYLTTALKKVKSNNKACYKVYRGTTKSTTVTVGTTVRFGRFASSSTEPDEAKIFGTRTMFTVDTCQGVDIKSYSKFPSEEEVLIPPFEQFKVESVTGPENSRKIKVIQLGNTESVYNCVAVRSSWKVIVGSTVGSIVGVAAIGRVGFYLYERRAG
SIO_010081: LOC117398406
subclass of: SO_0000673
so part of: LOC117398406
location: complement(join(1414258..1414364,1415042..1415726,1421461..1421538))
location: region:1414258-1421538:-1
so has part: feature:1421461-1421538:-1:exon
so has part: feature:1415042-1415726:-1:exon
so has part: feature:1414258-1414364:-1:exon

XP_033853300.2
type: Protein
SIO_000068: ncbiprotein

position:1414258:-1
position: 1414258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421538:-1
position: 1421538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1421461-1421538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1415042-1415726:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1414258-1414364:-1:exon

LOC117965857
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1420003..1422963
location: region:1420003-1422963:1
so has part: feature:1420003-1422963:1:exon
subclass of: SO_0000011

117965857
type: Gene
SIO_000068: ncbigene

position:1420003:1
position: 1420003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1422963:1
position: 1422963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1420003-1422963:1:exon

LOC117965857
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965857
product: uncharacterized LOC117965857, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004661551.1
SIO_010081: LOC117965857
subclass of: SO_0000673
so part of: LOC117965857
location: join(1420003..1420260,1422373..1422461,1422659..1422963)
location: region:1420003-1422963:1
so has part: feature:1420003-1420260:1:exon
so has part: feature:1422373-1422461:1:exon
so has part: feature:1422659-1422963:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1420003-1420260:1:exon

position:1420260:1
position: 1420260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1422373-1422461:1:exon

position:1422373:1
position: 1422373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1422461:1
position: 1422461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1422659-1422963:1:exon

position:1422659:1
position: 1422659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965857
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965857
product: uncharacterized LOC117965857, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004661550.1
SIO_010081: LOC117965857
subclass of: SO_0000673
so part of: LOC117965857
location: join(1420003..1420125,1422373..1422461,1422659..1422963)
location: region:1420003-1422963:1
so has part: feature:1420003-1420125:1:exon
so has part: feature:1422373-1422461:1:exon
so has part: feature:1422659-1422963:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1420003-1420125:1:exon

position:1420125:1
position: 1420125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1422373-1422461:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1422659-1422963:1:exon

LOC117965870
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1647137..1648187
location: region:1647137-1648187:1
so has part: feature:1647137-1648187:1:exon
subclass of: SO_0000011

117965870
type: Gene
SIO_000068: ncbigene

position:1647137:1
position: 1647137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648187:1
position: 1648187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1647137-1648187:1:exon

LOC117965870
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965870
product: uncharacterized LOC117965870
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004661572.1
SIO_010081: LOC117965870
subclass of: SO_0000673
so part of: LOC117965870
location: join(1647137..1647412,1647944..1648187)
location: region:1647137-1648187:1
so has part: feature:1647137-1647412:1:exon
so has part: feature:1647944-1648187:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1647137-1647412:1:exon

position:1647412:1
position: 1647412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1647944-1648187:1:exon

position:1647944:1
position: 1647944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965881
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965881
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1701591..1788836)
location: region:1701591-1788836:-1
so has part: feature:1701591-1788836:-1:exon
subclass of: SO_0000010

117965881
type: Gene
SIO_000068: ncbigene

position:1701591:-1
position: 1701591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1788836:-1
position: 1788836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1701591-1788836:-1:exon

LOC117965881
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965881
product: butyrophilin-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911014.1
SIO_010081: LOC117965881
subclass of: SO_0000673
so part of: LOC117965881
location: complement(join(1701591..1701609,1702471..1702489,1706733..1707014,1711215..1711562,1776965..1777038,1788812..1788836))
location: region:1701591-1788836:-1
so has part: feature:1788812-1788836:-1:exon
so has part: feature:1776965-1777038:-1:exon
so has part: feature:1711215-1711562:-1:exon
so has part: feature:1706733-1707014:-1:exon
so has part: feature:1702471-1702489:-1:exon
so has part: feature:1701591-1701609:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1788812-1788836:-1:exon

position:1788812:-1
position: 1788812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1776965-1777038:-1:exon

position:1776965:-1
position: 1776965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1777038:-1
position: 1777038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1711215-1711562:-1:exon

position:1711215:-1
position: 1711215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1711562:-1
position: 1711562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1706733-1707014:-1:exon

position:1706733:-1
position: 1706733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1707014:-1
position: 1707014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1702471-1702489:-1:exon

position:1702471:-1
position: 1702471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1702489:-1
position: 1702489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1701591-1701609:-1:exon

position:1701609:-1
position: 1701609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965881
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965881
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin-like protein 2
translation: MKMRFLGRTCLIVLSLLPAVSTQDAWRVVGSDHPVIAEPGNDVILPCHISSRLSAVDMEVRWYREIFNTPVHLYMNQNDQPGRQDRDYQGRTALRPSALERGDISLHLRDLRPSDRGVYTCLADDGSWNEEGQTEVIVAALGTQPSISMDSTQGEQTRLVCRSEGWDPEPEVIWRDRDGNDVTSMSNTTLLRVSQGLRSVSSYIKIKQQSNVFSCLVRSKIPKPDWESKLHISSDFFPGVCSVPS
SIO_010081: LOC117965881
subclass of: SO_0000673
so part of: LOC117965881
location: complement(join(1701591..1701609,1702471..1702489,1706733..1707014,1711215..1711562,1776965..1777034))
location: region:1701591-1777034:-1
so has part: feature:1776965-1777034:-1:exon
so has part: feature:1711215-1711562:-1:exon
so has part: feature:1706733-1707014:-1:exon
so has part: feature:1702471-1702489:-1:exon
so has part: feature:1701591-1701609:-1:exon

XP_034766905.1
type: Protein
SIO_000068: ncbiprotein

position:1777034:-1
position: 1777034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1776965-1777034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1711215-1711562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1706733-1707014:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1702471-1702489:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1701591-1701609:-1:exon

LOC117404953
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404953
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1867592..1868885)
location: region:1867592-1868885:-1
so has part: feature:1867592-1868885:-1:exon
subclass of: SO_0000010

117404953
type: Gene
SIO_000068: ncbigene

position:1867592:-1
position: 1867592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1868885:-1
position: 1868885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1867592-1868885:-1:exon

LOC117404953
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404953
product: zinc finger protein 501-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911015.1
SIO_010081: LOC117404953
subclass of: SO_0000673
so part of: LOC117404953
location: complement(join(1867592..1867617,1867701..1868885))
location: region:1867592-1868885:-1
so has part: feature:1867701-1868885:-1:exon
so has part: feature:1867592-1867617:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1867701-1868885:-1:exon

position:1867701:-1
position: 1867701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1867592-1867617:-1:exon

position:1867617:-1
position: 1867617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117404953
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404953
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 501-like
translation: MPVHFKEETELEPEPVHIKKETELEPVHIKEEETELEPVHMKEETELEPVHIKLEKIELQPVHIEEESIDLFKDSENISQPQISQQCTECEKSFSSLGYLKIHQRIHTGGKPYHCADCGKSFRQLGNLKRHQRIHTGEKPYYCFECGERFNESGNLKTHLRIHTGEKPYQCSDCEKSFRRLGALERHQRIHTGGKPYHCADCGKSFSQLGCLKIHQRIHTGEKPYQCSDCEKSFRQLGDLKRHQRIHTGEKPYYCFECGERFNESGNLKTHLRIHTGEKPYQCSDCEKSFVRLGALERHQRIHTGGKPYHCADCGKSFSQLGNLKTHLRIHTGEKPYHCSDCEKSFCQLGDLKRHQRIHTGASLTPTHPLPVPHPHPLNEGGPQE
SIO_010081: LOC117404953
subclass of: SO_0000673
so part of: LOC117404953
location: complement(join(1867592..1867617,1867701..1868832))
location: region:1867592-1868832:-1
so has part: feature:1867701-1868832:-1:exon
so has part: feature:1867592-1867617:-1:exon

XP_034766906.1
type: Protein
SIO_000068: ncbiprotein

position:1868832:-1
position: 1868832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1867701-1868832:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1867592-1867617:-1:exon

LOC117965861
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965861
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1885578..1887058)
location: region:1885578-1887058:-1
so has part: feature:1885578-1887058:-1:exon
subclass of: SO_0000011

117965861
type: Gene
SIO_000068: ncbigene

position:1885578:-1
position: 1885578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1887058:-1
position: 1887058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1885578-1887058:-1:exon

LOC117965861
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965861
product: uncharacterized LOC117965861, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004661559.1
SIO_010081: LOC117965861
subclass of: SO_0000673
so part of: LOC117965861
location: complement(join(1885578..1885710,1885941..1885990,1886629..1886729,1886813..1886880,1886982..1887058))
location: region:1885578-1887058:-1
so has part: feature:1886982-1887058:-1:exon
so has part: feature:1886813-1886880:-1:exon
so has part: feature:1886629-1886729:-1:exon
so has part: feature:1885941-1885990:-1:exon
so has part: feature:1885578-1885710:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1886982-1887058:-1:exon

position:1886982:-1
position: 1886982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1886813-1886880:-1:exon

position:1886813:-1
position: 1886813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1886880:-1
position: 1886880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1886629-1886729:-1:exon

position:1886629:-1
position: 1886629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1886729:-1
position: 1886729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1885941-1885990:-1:exon

position:1885941:-1
position: 1885941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1885990:-1
position: 1885990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1885578-1885710:-1:exon

position:1885710:-1
position: 1885710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965861
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965861
product: uncharacterized LOC117965861, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004661560.1
SIO_010081: LOC117965861
subclass of: SO_0000673
so part of: LOC117965861
location: complement(join(1885604..1885707,1885941..1885990,1886629..1886729,1886813..1886880,1886982..1887058))
location: region:1885604-1887058:-1
so has part: feature:1886982-1887058:-1:exon
so has part: feature:1886813-1886880:-1:exon
so has part: feature:1886629-1886729:-1:exon
so has part: feature:1885941-1885990:-1:exon
so has part: feature:1885604-1885707:-1:exon

position:1885604:-1
position: 1885604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1886982-1887058:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1886813-1886880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1886629-1886729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1885941-1885990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1885604-1885707:-1:exon

position:1885707:-1
position: 1885707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965843
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965843
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1898986..1901798
location: region:1898986-1901798:1
so has part: feature:1898986-1901798:1:exon
subclass of: SO_0000011

117965843
type: Gene
SIO_000068: ncbigene

position:1898986:1
position: 1898986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1901798:1
position: 1901798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1898986-1901798:1:exon

LOC117965843
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965843
product: uncharacterized LOC117965843
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004661532.1
SIO_010081: LOC117965843
subclass of: SO_0000673
so part of: LOC117965843
location: join(1898986..1899064,1899588..1899704,1901206..1901247,1901679..1901798)
location: region:1898986-1901798:1
so has part: feature:1898986-1899064:1:exon
so has part: feature:1899588-1899704:1:exon
so has part: feature:1901206-1901247:1:exon
so has part: feature:1901679-1901798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1898986-1899064:1:exon

position:1899064:1
position: 1899064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1899588-1899704:1:exon

position:1899588:1
position: 1899588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1899704:1
position: 1899704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1901206-1901247:1:exon

position:1901206:1
position: 1901206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1901247:1
position: 1901247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1901679-1901798:1:exon

position:1901679:1
position: 1901679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnat-cgu
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnat-cgu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1913070..1913141)
location: region:1913070-1913141:-1
so has part: feature:1913070-1913141:-1:exon
subclass of: SO_0000663

117965938
type: Gene
SIO_000068: ncbigene

position:1913070:-1
position: 1913070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1913141:-1
position: 1913141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1913070-1913141:-1:exon

trnat-cgu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnat-cgu
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon CGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1913107..1913109),aa:Thr, seq:cgt)
SIO_010081: trnat-cgu
subclass of: SO_0000673
so part of: trnat-cgu
location: complement(1913070..1913141)
location: region:1913070-1913141:-1
so has part: feature:1913070-1913141:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1913070-1913141:-1:exon

LOC117407837
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117407837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2060167..2081932
location: region:2060167-2081932:1
so has part: feature:2060167-2081932:1:exon
subclass of: SO_0000010

117407837
type: Gene
SIO_000068: ncbigene

position:2060167:1
position: 2060167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2081932:1
position: 2081932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2060167-2081932:1:exon

LOC117407837
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117407837
product: high affinity immunoglobulin gamma Fc receptor I-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911016.1
SIO_010081: LOC117407837
subclass of: SO_0000673
so part of: LOC117407837
location: join(2060167..2060185,2065884..2065898,2067752..2067787,2068956..2069249,2070244..2070525,2070785..2071057,2073669..2073808,2074597..2074777,2077513..2077611,2077861..2077891,2078501..2078571,2078893..2078952,2079406..2079465,2081317..2081381,2081640..2081932)
location: region:2060167-2081932:1
so has part: feature:2060167-2060185:1:exon
so has part: feature:2065884-2065898:1:exon
so has part: feature:2067752-2067787:1:exon
so has part: feature:2068956-2069249:1:exon
so has part: feature:2070244-2070525:1:exon
so has part: feature:2070785-2071057:1:exon
so has part: feature:2073669-2073808:1:exon
so has part: feature:2074597-2074777:1:exon
so has part: feature:2077513-2077611:1:exon
so has part: feature:2077861-2077891:1:exon
so has part: feature:2078501-2078571:1:exon
so has part: feature:2078893-2078952:1:exon
so has part: feature:2079406-2079465:1:exon
so has part: feature:2081317-2081381:1:exon
so has part: feature:2081640-2081932:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2060167-2060185:1:exon

position:2060185:1
position: 2060185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2065884-2065898:1:exon

position:2065884:1
position: 2065884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2065898:1
position: 2065898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2067752-2067787:1:exon

position:2067752:1
position: 2067752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2067787:1
position: 2067787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2068956-2069249:1:exon

position:2068956:1
position: 2068956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2069249:1
position: 2069249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2070244-2070525:1:exon

position:2070244:1
position: 2070244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2070525:1
position: 2070525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2070785-2071057:1:exon

position:2070785:1
position: 2070785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2071057:1
position: 2071057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2073669-2073808:1:exon

position:2073669:1
position: 2073669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2073808:1
position: 2073808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2074597-2074777:1:exon

position:2074597:1
position: 2074597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2074777:1
position: 2074777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2077513-2077611:1:exon

position:2077513:1
position: 2077513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2077611:1
position: 2077611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2077861-2077891:1:exon

position:2077861:1
position: 2077861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2077891:1
position: 2077891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2078501-2078571:1:exon

position:2078501:1
position: 2078501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2078571:1
position: 2078571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2078893-2078952:1:exon

position:2078893:1
position: 2078893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2078952:1
position: 2078952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2079406-2079465:1:exon

position:2079406:1
position: 2079406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2079465:1
position: 2079465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2081317-2081381:1:exon

position:2081317:1
position: 2081317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2081381:1
position: 2081381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2081640-2081932:1:exon

position:2081640:1
position: 2081640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117407837
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117407837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high affinity immunoglobulin gamma Fc receptor I-like
translation: MNRKGNLAALILLTVVSCSRQYEELPQTTLTLEPPFPEIFTGETVTLRCGVEGGSAGWKYLWYKDSEDTPVLQTAGRSITGDSYTITAAAVSDQGQYCCRGQRGDQPLYSQLSDKVTVTVSEGHPQAVLTLQPAWSQIFIGETVTLSCEVEGGSADWRFKQYRDGREEAGCSDQYRSRYGDSCTISTAQYHHSGVYWCESASGQERSNTVTLAVSNQWVILQTPSQPVFEGDTLTLRCRVHTGYTTTRVAFYKDNKQLQYRAGTAQSVDRVSKSDEGSYRCKAWWWNTDSRTESSSDSAEVWVSVRERPRAVLTQEPAWTQIYESERVTLRCQVQGGYIDWRFTWYKAGRNAPGTQLQYRYSKDNGTVRGAGSQDQHSIPAAGLRDTGRYQCEVEAAGMGLKKRSASVSLTVRASWQSAAAAGFSVGFFVILLIVFTLLLLYHKIRGFPCITGGKRRKRSDQNQDQAAGGVEISSQAQQPESEEPIYCNIDSSKHNIKKKDTEEAIYCNTDTSKQNKNKKGKSTADNAEAMNVTVLPKKKRK
SIO_010081: LOC117407837
subclass of: SO_0000673
so part of: LOC117407837
location: join(2060167..2060185,2065884..2065898,2067752..2067787,2068956..2069249,2070244..2070525,2070785..2071057,2073669..2073808,2074597..2074777,2077513..2077611,2077861..2077891,2078501..2078571,2078893..2078952,2079406..2079465,2081317..2081381,2081640..2081642)
location: region:2060167-2081642:1
so has part: feature:2060167-2060185:1:exon
so has part: feature:2065884-2065898:1:exon
so has part: feature:2067752-2067787:1:exon
so has part: feature:2068956-2069249:1:exon
so has part: feature:2070244-2070525:1:exon
so has part: feature:2070785-2071057:1:exon
so has part: feature:2073669-2073808:1:exon
so has part: feature:2074597-2074777:1:exon
so has part: feature:2077513-2077611:1:exon
so has part: feature:2077861-2077891:1:exon
so has part: feature:2078501-2078571:1:exon
so has part: feature:2078893-2078952:1:exon
so has part: feature:2079406-2079465:1:exon
so has part: feature:2081317-2081381:1:exon
so has part: feature:2081640-2081642:1:exon

XP_034766907.1
type: Protein
SIO_000068: ncbiprotein

position:2081642:1
position: 2081642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2060167-2060185:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2065884-2065898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2067752-2067787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2068956-2069249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2070244-2070525:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2070785-2071057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2073669-2073808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2074597-2074777:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2077513-2077611:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2077861-2077891:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2078501-2078571:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2078893-2078952:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2079406-2079465:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2081317-2081381:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2081640-2081642:1:exon

LOC117965882
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2107007..2124582
location: region:2107007-2124582:1
so has part: feature:2107007-2124582:1:exon
subclass of: SO_0000010

117965882
type: Gene
SIO_000068: ncbigene

position:2107007:1
position: 2107007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2124582:1
position: 2124582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2107007-2124582:1:exon

LOC117965882
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965882
product: zinc finger protein 2 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911017.1
SIO_010081: LOC117965882
subclass of: SO_0000673
so part of: LOC117965882
location: join(2107007..2107055,2108553..2108914,2123031..2124582)
location: region:2107007-2124582:1
so has part: feature:2107007-2107055:1:exon
so has part: feature:2108553-2108914:1:exon
so has part: feature:2123031-2124582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2107007-2107055:1:exon

position:2107055:1
position: 2107055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2108553-2108914:1:exon

position:2108553:1
position: 2108553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2108914:1
position: 2108914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2123031-2124582:1:exon

position:2123031:1
position: 2123031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965882
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 2 homolog
translation: MDSVEMESVQIKEEFSEPELVPFRAEVFGLASLPMKQELCEMQCDSSQPEVPEIKAEHSELEIPQTEEHLAVKQEEVLVINHIKQEPPEVEFDHMEPGKEESEDFKPNIPGPDCGKGFMQTRHLNKTQRTHTGEKPYHCSDCGKSFNHFRNLKQHQRIHTGEKPYHCFDCGKSFSQLNSLVLHQRTHTGEKPYHCSDCGKSFSQSNSLVLHQRTHTGEKPYHCSDCGKSFSRSDSLVSHQRTHTGEKPYHCSDCGKSFSRSDSLVSHQRTHTGEKPYRCSDCGKSFRQLGSLKEHQRVHTGEKPYHCSDCGKSFSQLGSLKGHQRTHTGKKPYHCSDCGKSFSQLGSLKGHQRTHAGEKPYHCSDCGKSFSWSDSLVPHQRTHTGEKPYHCSDCGKSFSRSDHLVSHQRTHTGEKPYHCSDCGKNFSRSDSLVSHQRTHTGEKPYHCFDCGKSFRQSNSLVSHQRTHTGEKPYHCSDCGKSFSQLGRLKGHQRTHTGEKPYHCSDCGKSFSRSDSLVSHQRTHTGAKPYH
SIO_010081: LOC117965882
subclass of: SO_0000673
so part of: LOC117965882
location: join(2108583..2108914,2123031..2124291)
location: region:2108583-2124291:1
so has part: feature:2108583-2108914:1:exon
so has part: feature:2123031-2124291:1:exon

XP_034766908.1
type: Protein
SIO_000068: ncbiprotein

position:2108583:1
position: 2108583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2124291:1
position: 2124291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2108583-2108914:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2123031-2124291:1:exon

LOC117965831
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2143411..2162831
location: region:2143411-2162831:1
so has part: feature:2143411-2162831:1:exon
subclass of: SO_0000010

117965831
type: Gene
SIO_000068: ncbigene

position:2143411:1
position: 2143411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2162831:1
position: 2162831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2143411-2162831:1:exon

LOC117965831
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965831
product: butyrophilin-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034910981.1
SIO_010081: LOC117965831
subclass of: SO_0000673
so part of: LOC117965831
location: join(2143411..2143612,2151398..2151745,2162382..2162831)
location: region:2143411-2162831:1
so has part: feature:2143411-2143612:1:exon
so has part: feature:2151398-2151745:1:exon
so has part: feature:2162382-2162831:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2143411-2143612:1:exon

position:2143612:1
position: 2143612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2151398-2151745:1:exon

position:2151398:1
position: 2151398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2151745:1
position: 2151745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2162382-2162831:1:exon

position:2162382:1
position: 2162382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965831
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin-like protein 2
translation: MKMRLLGRTCLIVLSLLPAVSTQRDGSSVVGSDQPLIASAGEDIFLPCHITPSLSAVNMDVRWFRQKFKIPVHLYEDRRDRTDVQDSDYRGRTALSRVGLQEGILSLNLRNLRPSDSGVYSCFATDGVWYGQGKTELIVRALGTQPSISMDSTQGEQTRLVCRSEGWSPEPEVIWRDRDGNNVTSLSNTTVQRDSQELIIVSSYIKIKQQSNVFSCLVRSKIPKPDWESKLHISSEYHMFVD
SIO_010081: LOC117965831
subclass of: SO_0000673
so part of: LOC117965831
location: join(2143540..2143612,2151398..2151745,2162382..2162689)
location: region:2143540-2162689:1
so has part: feature:2143540-2143612:1:exon
so has part: feature:2151398-2151745:1:exon
so has part: feature:2162382-2162689:1:exon

XP_034766872.1
type: Protein
SIO_000068: ncbiprotein

position:2143540:1
position: 2143540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2162689:1
position: 2162689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2143540-2143612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2151398-2151745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2162382-2162689:1:exon

LOC117965823
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2173892..2216351
location: region:2173892-2216351:1
so has part: feature:2173892-2216351:1:exon
subclass of: SO_0000010

117965823
type: Gene
SIO_000068: ncbigene

position:2173892:1
position: 2173892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2216351:1
position: 2216351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2173892-2216351:1:exon

LOC117965823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965823
product: butyrophilin subfamily 1 member A1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034910956.1
SIO_010081: LOC117965823
subclass of: SO_0000673
so part of: LOC117965823
location: join(2173892..2174024,2187905..2188252,2188362..2188643,2188934..2189041,2189145..2189171,2212074..2212100,2212893..2212922,2213065..2213091,2215671..2216351)
location: region:2173892-2216351:1
so has part: feature:2173892-2174024:1:exon
so has part: feature:2187905-2188252:1:exon
so has part: feature:2188362-2188643:1:exon
so has part: feature:2188934-2189041:1:exon
so has part: feature:2189145-2189171:1:exon
so has part: feature:2212074-2212100:1:exon
so has part: feature:2212893-2212922:1:exon
so has part: feature:2213065-2213091:1:exon
so has part: feature:2215671-2216351:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2173892-2174024:1:exon

position:2174024:1
position: 2174024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2187905-2188252:1:exon

position:2187905:1
position: 2187905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2188252:1
position: 2188252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2188362-2188643:1:exon

position:2188362:1
position: 2188362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2188643:1
position: 2188643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2188934-2189041:1:exon

position:2188934:1
position: 2188934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2189041:1
position: 2189041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2189145-2189171:1:exon

position:2189145:1
position: 2189145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2189171:1
position: 2189171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2212074-2212100:1:exon

position:2212074:1
position: 2212074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2212100:1
position: 2212100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2212893-2212922:1:exon

position:2212893:1
position: 2212893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2212922:1
position: 2212922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2213065-2213091:1:exon

position:2213065:1
position: 2213065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2213091:1
position: 2213091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2215671-2216351:1:exon

position:2215671:1
position: 2215671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965823
product: butyrophilin subfamily 1 member A1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034910957.1
SIO_010081: LOC117965823
subclass of: SO_0000673
so part of: LOC117965823
location: join(2173895..2174024,2188362..2188643,2188934..2189041,2189145..2189171,2212074..2212100,2212893..2212922,2213065..2213091,2215671..2216351)
location: region:2173895-2216351:1
so has part: feature:2173895-2174024:1:exon
so has part: feature:2188362-2188643:1:exon
so has part: feature:2188934-2189041:1:exon
so has part: feature:2189145-2189171:1:exon
so has part: feature:2212074-2212100:1:exon
so has part: feature:2212893-2212922:1:exon
so has part: feature:2213065-2213091:1:exon
so has part: feature:2215671-2216351:1:exon

position:2173895:1
position: 2173895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2173895-2174024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2188362-2188643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2188934-2189041:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2189145-2189171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2212074-2212100:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2212893-2212922:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2213065-2213091:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2215671-2216351:1:exon

LOC117965823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like isoform X1
translation: MRLLGRTCLIVLSLLPAVSTQRDGSSVVGSDQPLIASPGEDVILPCHITPSLSAVDLDVRWYRENFKIPVHLYEDRRDHSDVQDSDYRGRTALSILGLQEGILSLQLRNLRHTDSGVYSCYVTDGVWYGQGKTELIVRALGTQPSISMDSAQGEQTWLVCRSEGWSPEPEVIWRDRDGNDLTSLSSTTVQRDSQGFISVSSYIKIKQQSIVFSCLVRSKTPKPDWESKLHISREFFPGLSGWMVVFFLTLALSIGAIPLLVIQWRRMDAMERKLEPMAAKCLRKELESVKREVLKSEWKWILSSAVDVTLDPDTAQPELTLSAEGKRVRRGETWQDLPHNPERFDYWSCVLGREGFTSGRHYWQVQVQGNKWWRLGVSRESALRKGEFSTTPQQGYWAVWWGNGDRGEFTALTDPQTPLPLSLKPQKLGVYLDYEEGQLSFYNAETRSHIYTFTDMKFNPNEKLYPFFYTYNETNLVLESPDPISTVD
SIO_010081: LOC117965823
subclass of: SO_0000673
so part of: LOC117965823
location: join(2173958..2174024,2187905..2188252,2188362..2188643,2188934..2189041,2189145..2189171,2212074..2212100,2212893..2212922,2213065..2213091,2215671..2216221)
location: region:2173958-2216221:1
so has part: feature:2173958-2174024:1:exon
so has part: feature:2187905-2188252:1:exon
so has part: feature:2188362-2188643:1:exon
so has part: feature:2188934-2189041:1:exon
so has part: feature:2189145-2189171:1:exon
so has part: feature:2212074-2212100:1:exon
so has part: feature:2212893-2212922:1:exon
so has part: feature:2213065-2213091:1:exon
so has part: feature:2215671-2216221:1:exon

XP_034766847.1
type: Protein
SIO_000068: ncbiprotein

position:2173958:1
position: 2173958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2216221:1
position: 2216221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2173958-2174024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2187905-2188252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2188362-2188643:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2188934-2189041:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2189145-2189171:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2212074-2212100:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2212893-2212922:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2213065-2213091:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2215671-2216221:1:exon

LOC117965823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like isoform X2
translation: MRLLGRTCLIVLSLLPAVSTQRALGTQPSISMDSAQGEQTWLVCRSEGWSPEPEVIWRDRDGNDLTSLSSTTVQRDSQGFISVSSYIKIKQQSIVFSCLVRSKTPKPDWESKLHISREFFPGLSGWMVVFFLTLALSIGAIPLLVIQWRRMDAMERKLEPMAAKCLRKELESVKREVLKSEWKWILSSAVDVTLDPDTAQPELTLSAEGKRVRRGETWQDLPHNPERFDYWSCVLGREGFTSGRHYWQVQVQGNKWWRLGVSRESALRKGEFSTTPQQGYWAVWWGNGDRGEFTALTDPQTPLPLSLKPQKLGVYLDYEEGQLSFYNAETRSHIYTFTDMKFNPNEKLYPFFYTYNETNLVLESPDPISTVD
SIO_010081: LOC117965823
subclass of: SO_0000673
so part of: LOC117965823
location: join(2173958..2174024,2188362..2188643,2188934..2189041,2189145..2189171,2212074..2212100,2212893..2212922,2213065..2213091,2215671..2216221)
location: region:2173958-2216221:1
so has part: feature:2173958-2174024:1:exon
so has part: feature:2188362-2188643:1:exon
so has part: feature:2188934-2189041:1:exon
so has part: feature:2189145-2189171:1:exon
so has part: feature:2212074-2212100:1:exon
so has part: feature:2212893-2212922:1:exon
so has part: feature:2213065-2213091:1:exon
so has part: feature:2215671-2216221:1:exon

XP_034766848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2173958-2174024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2188362-2188643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2188934-2189041:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2189145-2189171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2212074-2212100:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2212893-2212922:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2213065-2213091:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2215671-2216221:1:exon

LOC117965883
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2381354..>2394607
location: region:2381354-2394607:1
so has part: feature:2381354-2394607:1:exon
subclass of: SO_0000010

117965883
type: Gene
SIO_000068: ncbigene

position:2381354:1
position: 2381354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2394607:1
position: 2394607
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2381354-2394607:1:exon

LOC117965883
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965883
product: butyrophilin subfamily 3 member A2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911018.1
SIO_010081: LOC117965883
subclass of: SO_0000673
so part of: LOC117965883
location: join(2381354..2381570,2382555..2382671,2393890..2394237,2394336..>2394607)
location: region:2381354-2394607:1
so has part: feature:2381354-2381570:1:exon
so has part: feature:2382555-2382671:1:exon
so has part: feature:2393890-2394237:1:exon
so has part: feature:2394336-2394607:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2381354-2381570:1:exon

position:2381570:1
position: 2381570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2382555-2382671:1:exon

position:2382555:1
position: 2382555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2382671:1
position: 2382671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2393890-2394237:1:exon

position:2393890:1
position: 2393890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2394237:1
position: 2394237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2394336-2394607:1:exon

position:2394336:1
position: 2394336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965883
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 3 member A2-like
translation: MIFTILEEIKGQGRQNTLMLQALLKRQPQIEQERGSLRLDEFQFSLAIKEDIDRVERMLMDQATEKALVCDRSAAKKSSVTEADTEARMRSWLKYNGDRDGGRKRRAEKKKDDSTVIGSDQPLITSPGEDVILPCHITPSLSAVDMDVRWYRESFNNPVHLYEDRSDQTDVQDSDYRGRTALSRVGLQEGILSLNLRNLRPSDSGVYYCYATDGDWGGQGNTELIVKALGTQPSISMDSTQGEQTRLVCRSEGWSPEPEVTWSDRDGNDVTSLSSPTVQRDSQGFLSVSSYIKIKQQSNVFSCLVRSKTPRPDWESKL
SIO_010081: LOC117965883
subclass of: SO_0000673
so part of: LOC117965883
location: join(2381354..2381570,2382555..2382671,2393890..2394237,2394336..>2394607)
location: region:2381354-2394607:1
so has part: feature:2381354-2381570:1:exon
so has part: feature:2382555-2382671:1:exon
so has part: feature:2393890-2394237:1:exon
so has part: feature:2394336-2394607:1:exon

XP_034766909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2381354-2381570:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2382555-2382671:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2393890-2394237:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2394336-2394607:1:exon

LOC117965835
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965835
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2399197..2410898
location: region:2399197-2410898:1
so has part: feature:2399197-2410898:1:exon
subclass of: SO_0000010

117965835
type: Gene
SIO_000068: ncbigene

position:2399197:1
position: 2399197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2410898:1
position: 2410898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2399197-2410898:1:exon

LOC117965835
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965835
product: E3 ubiquitin-protein ligase TRIM39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034910985.1
SIO_010081: LOC117965835
subclass of: SO_0000673
so part of: LOC117965835
location: join(2399197..2399383,2410276..2410898)
location: region:2399197-2410898:1
so has part: feature:2399197-2399383:1:exon
so has part: feature:2410276-2410898:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2399197-2399383:1:exon

position:2399383:1
position: 2399383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2410276-2410898:1:exon

position:2410276:1
position: 2410276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965835
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: MKFNPNEKLYPFFWTLEYKDLALVSPGKMNDSFFFLLVWKWILAASVDVTLDPDTASPLLTLSAEGKRVRLGGTQGLPDTPQRFDRWPCVLGREGFTSGRCYWQVQVGGNTNWRLGVSRESAERKGVFSMTPQQGYWTVRWSGPGFAALTDPQTPLPRSLKPQKLGVYLDYEEGQLSFYNVETRSHIYTFTDMEFNPNQKLYPLFWTVDRNTALVLESPDPDPVSSAD
SIO_010081: LOC117965835
subclass of: SO_0000673
so part of: LOC117965835
location: join(2399245..2399383,2410276..2410823)
location: region:2399245-2410823:1
so has part: feature:2399245-2399383:1:exon
so has part: feature:2410276-2410823:1:exon

XP_034766876.1
type: Protein
SIO_000068: ncbiprotein

position:2399245:1
position: 2399245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2410823:1
position: 2410823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2399245-2399383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2410276-2410823:1:exon

LOC117965884
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2419746..2439050)
location: region:2419746-2439050:-1
so has part: feature:2419746-2439050:-1:exon

117965884
type: Gene
SIO_000068: ncbigene

position:2419746:-1
position: 2419746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2439050:-1
position: 2439050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2419746-2439050:-1:exon

LOC117965884
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117965884
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117965884
subclass of: SO_0000673
so part of: LOC117965884
location: complement(2419746..2420324)
location: region:2419746-2420324:-1
so has part: feature:2419746-2420324:-1:exon

position:2420324:-1
position: 2420324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2419746-2420324:-1:exon

LOC117965884
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117965884
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117965884
subclass of: SO_0000673
so part of: LOC117965884
location: complement(2438046..2438072)
location: region:2438046-2438072:-1
so has part: feature:2438046-2438072:-1:exon

position:2438046:-1
position: 2438046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2438072:-1
position: 2438072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2438046-2438072:-1:exon

LOC117965884
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117965884
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117965884
subclass of: SO_0000673
so part of: LOC117965884
location: complement(2438217..2438246)
location: region:2438217-2438246:-1
so has part: feature:2438217-2438246:-1:exon

position:2438217:-1
position: 2438217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2438246:-1
position: 2438246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2438217-2438246:-1:exon

LOC117965884
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117965884
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117965884
subclass of: SO_0000673
so part of: LOC117965884
location: complement(2439044..2439050)
location: region:2439044-2439050:-1
so has part: feature:2439044-2439050:-1:exon

position:2439044:-1
position: 2439044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2439044-2439050:-1:exon

LOC117410029
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117410029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2452566..2492514
location: region:2452566-2492514:1
so has part: feature:2452566-2492514:1:exon
subclass of: SO_0000010

117410029
type: Gene
SIO_000068: ncbigene

position:2452566:1
position: 2452566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2492514:1
position: 2492514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2452566-2492514:1:exon

LOC117410029
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117410029
product: butyrophilin subfamily 1 member A1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034910950.1
SIO_010081: LOC117410029
subclass of: SO_0000673
so part of: LOC117410029
location: join(2452566..2452667,2459343..2459419,2460506..2460853,2461002..2461021,2470126..2470387,2472970..2473077,2473181..2473207,2474062..2474088,2477671..2477700,2477843..2477869,2478328..2478912,2491716..2492514)
location: region:2452566-2492514:1
so has part: feature:2452566-2452667:1:exon
so has part: feature:2459343-2459419:1:exon
so has part: feature:2460506-2460853:1:exon
so has part: feature:2461002-2461021:1:exon
so has part: feature:2470126-2470387:1:exon
so has part: feature:2472970-2473077:1:exon
so has part: feature:2473181-2473207:1:exon
so has part: feature:2474062-2474088:1:exon
so has part: feature:2477671-2477700:1:exon
so has part: feature:2477843-2477869:1:exon
so has part: feature:2478328-2478912:1:exon
so has part: feature:2491716-2492514:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2452566-2452667:1:exon

position:2452667:1
position: 2452667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2459343-2459419:1:exon

position:2459343:1
position: 2459343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2459419:1
position: 2459419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2460506-2460853:1:exon

position:2460506:1
position: 2460506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2460853:1
position: 2460853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2461002-2461021:1:exon

position:2461002:1
position: 2461002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2461021:1
position: 2461021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2470126-2470387:1:exon

position:2470126:1
position: 2470126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2470387:1
position: 2470387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2472970-2473077:1:exon

position:2472970:1
position: 2472970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2473077:1
position: 2473077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2473181-2473207:1:exon

position:2473181:1
position: 2473181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2473207:1
position: 2473207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2474062-2474088:1:exon

position:2474062:1
position: 2474062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2474088:1
position: 2474088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2477671-2477700:1:exon

position:2477671:1
position: 2477671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2477700:1
position: 2477700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2477843-2477869:1:exon

position:2477843:1
position: 2477843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2477869:1
position: 2477869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2478328-2478912:1:exon

position:2478328:1
position: 2478328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2478912:1
position: 2478912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2491716-2492514:1:exon

position:2491716:1
position: 2491716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117410029
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117410029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like
translation: MKMRFLGRTCLIVLSLLPAVSTQRDGSSVVGSDQPLIASPDEDVILPCHITPSLSAVDMEVRWYRENINIPVHLYDHQTDWADDQDSAYRGRTALSRLGLQEGILSLNLRNLRHTDSGVYSCYATDGAWYGQGKTELIVRALGTQPSISMDSTQGEQTRLVCRSEGWSPEPEVIWRDRDGNNVTSLSSPTVQRDSQGLLSVSSDIKIKQQSNVFSCLVRSKTPKPDWESKLHISSDFFPGVSGWMVAFFLTLALSIGAIPVLVFQWRRMDAMERKLEPKAAQRLRKELESVKREVLKSEWKWILRSAVDSLTLDLDTAHPQLTLPVDEKHVRRIRQDHNNPQRFDYRPCVQGREGFTSGRHYWELGVGENTFWRLGVSRESAPKKGKFSISPQQGYWTVGWDGDEDKDEFIALTDPQTPLPRSLKPQKLGVYLDYEEGQLSFYNVETRSHIYTFTDMKFNPNEKLYPFFWTLEYKDLALVSPGKMNDSFFFLLVWKWILAASVDVTLDPDTAYPQLILSAEGKRVRDGGVPLPVLGREGYTSGRRDWQVQVGGNTYWRL
SIO_010081: LOC117410029
subclass of: SO_0000673
so part of: LOC117410029
location: join(2459347..2459419,2460506..2460853,2461002..2461021,2470126..2470387,2472970..2473077,2473181..2473207,2474062..2474088,2477671..2477700,2477843..2477869,2478328..2478912,2491716..2491888)
location: region:2459347-2491888:1
so has part: feature:2459347-2459419:1:exon
so has part: feature:2460506-2460853:1:exon
so has part: feature:2461002-2461021:1:exon
so has part: feature:2470126-2470387:1:exon
so has part: feature:2472970-2473077:1:exon
so has part: feature:2473181-2473207:1:exon
so has part: feature:2474062-2474088:1:exon
so has part: feature:2477671-2477700:1:exon
so has part: feature:2477843-2477869:1:exon
so has part: feature:2478328-2478912:1:exon
so has part: feature:2491716-2491888:1:exon

XP_034766841.1
type: Protein
SIO_000068: ncbiprotein

position:2459347:1
position: 2459347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2491888:1
position: 2491888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2459347-2459419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2460506-2460853:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2461002-2461021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2470126-2470387:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2472970-2473077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2473181-2473207:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2474062-2474088:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2477671-2477700:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2477843-2477869:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2478328-2478912:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2491716-2491888:1:exon

LOC117965885
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2509184..2512234)
location: region:2509184-2512234:-1
so has part: feature:2509184-2512234:-1:exon
subclass of: SO_0000010

117965885
type: Gene
SIO_000068: ncbigene

position:2509184:-1
position: 2509184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2512234:-1
position: 2512234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2509184-2512234:-1:exon

LOC117965885
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965885
product: putative selection and upkeep of intraepithelial T-cells protein 1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034911019.1
SIO_010081: LOC117965885
subclass of: SO_0000673
so part of: LOC117965885
location: complement(join(2509184..2509341,2511934..2512234))
location: region:2509184-2512234:-1
so has part: feature:2511934-2512234:-1:exon
so has part: feature:2509184-2509341:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2511934-2512234:-1:exon

position:2511934:-1
position: 2511934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2509184-2509341:-1:exon

position:2509341:-1
position: 2509341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative selection and upkeep of intraepithelial T-cells protein 1 homolog
translation: MEVRWFRDAFEKPVHLYRSRKNILGTQDSDYRGRTALSPEALQTGDISLHLRNLQPSDRGVYTCVADDRSQYDEGQTEVIVAALGTQPSISVDSTEGEQTRLVCRSEGWSPEPEVIWRDKDGNNVTSLSNTHCC
SIO_010081: LOC117965885
subclass of: SO_0000673
so part of: LOC117965885
location: complement(join(2509184..2509341,2511934..2512180))
location: region:2509184-2512180:-1
so has part: feature:2511934-2512180:-1:exon
so has part: feature:2509184-2509341:-1:exon

XP_034766910.1
type: Protein
SIO_000068: ncbiprotein

position:2512180:-1
position: 2512180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2511934-2512180:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2509184-2509341:-1:exon

LOC117965845
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965845
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2603095..2637227)
location: region:2603095-2637227:-1
so has part: feature:2603095-2637227:-1:exon
subclass of: SO_0000011

117965845
type: Gene
SIO_000068: ncbigene

position:2603095:-1
position: 2603095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2637227:-1
position: 2637227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2603095-2637227:-1:exon

LOC117965845
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965845
product: uncharacterized LOC117965845
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004661534.1
SIO_010081: LOC117965845
subclass of: SO_0000673
so part of: LOC117965845
location: complement(join(2603095..2603315,2621851..2621924,2637071..2637227))
location: region:2603095-2637227:-1
so has part: feature:2637071-2637227:-1:exon
so has part: feature:2621851-2621924:-1:exon
so has part: feature:2603095-2603315:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2637071-2637227:-1:exon

position:2637071:-1
position: 2637071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2621851-2621924:-1:exon

position:2621851:-1
position: 2621851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2621924:-1
position: 2621924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2603095-2603315:-1:exon

position:2603315:-1
position: 2603315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965834
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965834
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2650148..2655889)
location: region:2650148-2655889:-1
so has part: feature:2650148-2655889:-1:exon
subclass of: SO_0000010

117965834
type: Gene
SIO_000068: ncbigene

position:2650148:-1
position: 2650148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2655889:-1
position: 2655889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2650148-2655889:-1:exon

LOC117965834
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965834
product: myelin-oligodendrocyte glycoprotein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034910984.1
SIO_010081: LOC117965834
subclass of: SO_0000673
so part of: LOC117965834
location: complement(join(2650148..2650283,2650493..2650519,2654687..2655034,2655234..2655307,2655493..2655889))
location: region:2650148-2655889:-1
so has part: feature:2655493-2655889:-1:exon
so has part: feature:2655234-2655307:-1:exon
so has part: feature:2654687-2655034:-1:exon
so has part: feature:2650493-2650519:-1:exon
so has part: feature:2650148-2650283:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2655493-2655889:-1:exon

position:2655493:-1
position: 2655493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2655234-2655307:-1:exon

position:2655234:-1
position: 2655234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2655307:-1
position: 2655307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2654687-2655034:-1:exon

position:2654687:-1
position: 2654687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2655034:-1
position: 2655034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2650493-2650519:-1:exon

position:2650493:-1
position: 2650493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2650519:-1
position: 2650519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2650148-2650283:-1:exon

position:2650283:-1
position: 2650283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965834
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965834
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-oligodendrocyte glycoprotein-like
translation: MVLTLLIQWICYYLYKNIATIQKSVEWISYYLLKNIATIQKSAEWISYYLLKNIATIQKSVEWICYYLLSRPFAKNSREMKMRFLGRTCLIVLSLLSAVSTQDAWTVVGSDQPVIAEPGDDVILPCHISPRVSAVDVEVRWFRDRFDTPVHLYLKKKDQPGTQDSDYRGRTALPPEALQRGDLSLRLRDLRPSDRGIYTCFADDRSWYENGQTEVIVTAMERQFEPMGSYLGIA
SIO_010081: LOC117965834
subclass of: SO_0000673
so part of: LOC117965834
location: complement(join(2650261..2650283,2650493..2650519,2654687..2655034,2655234..2655307,2655493..2655725))
location: region:2650261-2655725:-1
so has part: feature:2655493-2655725:-1:exon
so has part: feature:2655234-2655307:-1:exon
so has part: feature:2654687-2655034:-1:exon
so has part: feature:2650493-2650519:-1:exon
so has part: feature:2650261-2650283:-1:exon

XP_034766875.1
type: Protein
SIO_000068: ncbiprotein

position:2650261:-1
position: 2650261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2655725:-1
position: 2655725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2655493-2655725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2655234-2655307:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2654687-2655034:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2650493-2650519:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2650261-2650283:-1:exon

trnat-cgu
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnat-cgu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2690900..2690971)
location: region:2690900-2690971:-1
so has part: feature:2690900-2690971:-1:exon
subclass of: SO_0000663

117965939
type: Gene
SIO_000068: ncbigene

position:2690900:-1
position: 2690900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2690971:-1
position: 2690971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2690900-2690971:-1:exon

trnat-cgu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnat-cgu
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon CGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2690937..2690939),aa:Thr, seq:cgt)
SIO_010081: trnat-cgu
subclass of: SO_0000673
so part of: trnat-cgu
location: complement(2690900..2690971)
location: region:2690900-2690971:-1
so has part: feature:2690900-2690971:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2690900-2690971:-1:exon

LOC117404833
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404833
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2708689..2923195)
location: region:2708689-2923195:-1
so has part: feature:2708689-2923195:-1:exon
subclass of: SO_0000010

117404833
type: Gene
SIO_000068: ncbigene

position:2708689:-1
position: 2708689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2923195:-1
position: 2923195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2708689-2923195:-1:exon

LOC117404833
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404833
product: butyrophilin subfamily 1 member A1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911020.1
SIO_010081: LOC117404833
subclass of: SO_0000673
so part of: LOC117404833
location: complement(join(2708689..2708995,2712608..2712977,2722528..2723112,2913020..2913046,2913189..2913218,2918786..2918812,2919863..2919889,2919993..2920100,2922936..2923195))
location: region:2708689-2923195:-1
so has part: feature:2922936-2923195:-1:exon
so has part: feature:2919993-2920100:-1:exon
so has part: feature:2919863-2919889:-1:exon
so has part: feature:2918786-2918812:-1:exon
so has part: feature:2913189-2913218:-1:exon
so has part: feature:2913020-2913046:-1:exon
so has part: feature:2722528-2723112:-1:exon
so has part: feature:2712608-2712977:-1:exon
so has part: feature:2708689-2708995:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2922936-2923195:-1:exon

position:2922936:-1
position: 2922936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2919993-2920100:-1:exon

position:2919993:-1
position: 2919993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2920100:-1
position: 2920100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2919863-2919889:-1:exon

position:2919863:-1
position: 2919863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2919889:-1
position: 2919889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2918786-2918812:-1:exon

position:2918786:-1
position: 2918786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2918812:-1
position: 2918812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2913189-2913218:-1:exon

position:2913189:-1
position: 2913189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2913218:-1
position: 2913218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2913020-2913046:-1:exon

position:2913020:-1
position: 2913020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2913046:-1
position: 2913046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2722528-2723112:-1:exon

position:2722528:-1
position: 2722528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2723112:-1
position: 2723112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2712608-2712977:-1:exon

position:2712608:-1
position: 2712608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2712977:-1
position: 2712977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2708689-2708995:-1:exon

position:2708995:-1
position: 2708995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117404833
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404833
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like
translation: MDSTQGEQTRLVCRSEGWDPEPEVIWRDRDGNDVTSLSSPTVQRDSQGLLSVSSYIKIKQQSNVFSCLVRSKTPKPDWESKLHISSDFFPGVSGWMVAFFLTLALSIGAIPLLVIKSRRMNAMERQFEPMAAQRLREELESVKREVLKSEWKWILSSAVDSLTLDLDTAHPRLTLPVDEKQVKSKRQDHNNPQRFDYRRCVLGKEGFTSGRHYWELGVGENTFWRLGVSRESAPKKGKFSMTPQQGYWTVGWSGDEDKDEFTALTDPQTPLPPSLKPQKLGVYLDYEEGQLSFYNVEIRSHIYTFTDMEFNPNEKLYPFFWSLEYKDLALVSPGKMNDSSFLLLVWEEILAASVDSLTLDLDTAHPQLTLPVDEKQVRRKRQDHNNPQRFDYRRCVLGKEGFTSGRHYWELGVGENTFWRLGVSRESAPRKGEFSMTPQQGYWTVGWEGDEEKEEFIALTDPQTPLPLGLKPQKMGVQRTNCPPLFQETLQHENVDVPACFNMLNKLMLRKIHYSLLFLKRVPSTSAVLKVTHKMSCFSKQARDAVSFQTSLNCKLQRVCSATMILSIAAHFTKPPHV
SIO_010081: LOC117404833
subclass of: SO_0000673
so part of: LOC117404833
location: complement(join(2708689..2708995,2712608..2712977,2722528..2723112,2913020..2913046,2913189..2913218,2918786..2918812,2919863..2919889,2919993..2920100,2922936..2923191))
location: region:2708689-2923191:-1
so has part: feature:2922936-2923191:-1:exon
so has part: feature:2919993-2920100:-1:exon
so has part: feature:2919863-2919889:-1:exon
so has part: feature:2918786-2918812:-1:exon
so has part: feature:2913189-2913218:-1:exon
so has part: feature:2913020-2913046:-1:exon
so has part: feature:2722528-2723112:-1:exon
so has part: feature:2712608-2712977:-1:exon
so has part: feature:2708689-2708995:-1:exon

XP_034766911.1
type: Protein
SIO_000068: ncbiprotein

position:2923191:-1
position: 2923191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2922936-2923191:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2919993-2920100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2919863-2919889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2918786-2918812:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2913189-2913218:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2913020-2913046:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2722528-2723112:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2712608-2712977:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2708689-2708995:-1:exon

LOC117404832
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404832
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2838227..>3031044
location: region:2838227-3031044:1
so has part: feature:2838227-3031044:1:exon
subclass of: SO_0000010

117404832
type: Gene
SIO_000068: ncbigene

position:2838227:1
position: 2838227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3031044:1
position: 3031044
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2838227-3031044:1:exon

LOC117404832
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404832
product: butyrophilin subfamily 1 member A1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034911022.1
SIO_010081: LOC117404832
subclass of: SO_0000673
so part of: LOC117404832
location: join(2838227..2838305,3015579..3015655,3015855..3016202,3023013..3023294,3025246..3025353,3025457..3025483,3026580..3026606,3030223..3030252,3030394..3030420,3030866..>3031044)
location: region:2838227-3031044:1
so has part: feature:2838227-2838305:1:exon
so has part: feature:3015579-3015655:1:exon
so has part: feature:3015855-3016202:1:exon
so has part: feature:3023013-3023294:1:exon
so has part: feature:3025246-3025353:1:exon
so has part: feature:3025457-3025483:1:exon
so has part: feature:3026580-3026606:1:exon
so has part: feature:3030223-3030252:1:exon
so has part: feature:3030394-3030420:1:exon
so has part: feature:3030866-3031044:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2838227-2838305:1:exon

position:2838305:1
position: 2838305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3015579-3015655:1:exon

position:3015579:1
position: 3015579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3015655:1
position: 3015655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3015855-3016202:1:exon

position:3015855:1
position: 3015855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3016202:1
position: 3016202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3023013-3023294:1:exon

position:3023013:1
position: 3023013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3023294:1
position: 3023294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3025246-3025353:1:exon

position:3025246:1
position: 3025246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3025353:1
position: 3025353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3025457-3025483:1:exon

position:3025457:1
position: 3025457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3025483:1
position: 3025483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3026580-3026606:1:exon

position:3026580:1
position: 3026580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3026606:1
position: 3026606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3030223-3030252:1:exon

position:3030223:1
position: 3030223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3030252:1
position: 3030252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3030394-3030420:1:exon

position:3030394:1
position: 3030394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3030420:1
position: 3030420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3030866-3031044:1:exon

position:3030866:1
position: 3030866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965886
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2926765..2958097)
location: region:2926765-2958097:-1
so has part: feature:2926765-2958097:-1:exon
subclass of: SO_0000010

117965886
type: Gene
SIO_000068: ncbigene

position:2926765:-1
position: 2926765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2958097:-1
position: 2958097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2926765-2958097:-1:exon

LOC117965886
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965886
product: butyrophilin-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911021.1
SIO_010081: LOC117965886
subclass of: SO_0000673
so part of: LOC117965886
location: complement(join(2926765..2926875,2928950..2929001,2934985..2935264,2939663..2940010,2957941..2958097))
location: region:2926765-2958097:-1
so has part: feature:2957941-2958097:-1:exon
so has part: feature:2939663-2940010:-1:exon
so has part: feature:2934985-2935264:-1:exon
so has part: feature:2928950-2929001:-1:exon
so has part: feature:2926765-2926875:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2957941-2958097:-1:exon

position:2957941:-1
position: 2957941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2939663-2940010:-1:exon

position:2939663:-1
position: 2939663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2940010:-1
position: 2940010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2934985-2935264:-1:exon

position:2934985:-1
position: 2934985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2935264:-1
position: 2935264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2928950-2929001:-1:exon

position:2928950:-1
position: 2928950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2929001:-1
position: 2929001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2926765-2926875:-1:exon

position:2926875:-1
position: 2926875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965886
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin-like protein 2
translation: MAVSLRDLSDPDTFLVEVHSVVQLPGAQCGGVCQVDAGHQSTAPDDLSIDITGEWRVVGSDQPVIAEAGDDVILPCHISPRLSAVDMEVRWFRDAFEKPVHLYSFQETLLETQDSDYQDRTALPPSALQKGDISLHLRNLRPSDSGVYTCLADDRRWNEDGQTEVIVTALGTQPSISMDSTQGEQTRLVCRSERWSSEPEVIWRDRDGNNVTSLSSPTVQRDRQGFLSVSSYIKIKQQSNVFSCLVRSKTPKPDWESKLHISCLGVRHPRLTLPVDGKQVHGVSLALISLSLLILVMMSSCPVTFHPDSVLWAWK
SIO_010081: LOC117965886
subclass of: SO_0000673
so part of: LOC117965886
location: complement(join(2926765..2926875,2928950..2929001,2934985..2935264,2939663..2940010,2957941..2958097))
location: region:2926765-2958097:-1
so has part: feature:2957941-2958097:-1:exon
so has part: feature:2939663-2940010:-1:exon
so has part: feature:2934985-2935264:-1:exon
so has part: feature:2928950-2929001:-1:exon
so has part: feature:2926765-2926875:-1:exon

XP_034766912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2957941-2958097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2939663-2940010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2934985-2935264:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2928950-2929001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2926765-2926875:-1:exon

LOC117404832
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404832
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like
translation: MKMRFLGRTCLIVLSLLPAVSTQTGGWRVVGSDHPVIAEAGDDVILPCHISPRVSAVDMEVRWFRDRFDMPIHLYLNQRDELSRQDSDYWGRTAVPPEALQRGDLSLRLRYIRPSDRGVYTCLADDGSQYEEGQSEVIVAALGTQPSISMDSTQGEQTRLVCRSEGWSPEPEVIWRDRDGNNVTSLSNTTVQRDSQGFLSVSSYIKIKQQSNVFSCLVRSKIPKRDWESKLHISSDFFPGVSGWMVAFFLTLALSIGAIPLLVFQWRKMDAMERKLEPMAAQRLREELESVKREVLKSEWKWILSSAVDSLTLDLDTAHPRLTLPVDGKQVRGKRQNHNNLQRFDYRRCVLGREGFTSGRHYWELGV
SIO_010081: LOC117404832
subclass of: SO_0000673
so part of: LOC117404832
location: join(3015583..3015655,3015855..3016202,3023013..3023294,3025246..3025353,3025457..3025483,3026580..3026606,3030223..3030252,3030394..3030420,3030866..>3031044)
location: region:3015583-3031044:1
so has part: feature:3015583-3015655:1:exon
so has part: feature:3015855-3016202:1:exon
so has part: feature:3023013-3023294:1:exon
so has part: feature:3025246-3025353:1:exon
so has part: feature:3025457-3025483:1:exon
so has part: feature:3026580-3026606:1:exon
so has part: feature:3030223-3030252:1:exon
so has part: feature:3030394-3030420:1:exon
so has part: feature:3030866-3031044:1:exon

XP_034766913.1
type: Protein
SIO_000068: ncbiprotein

position:3015583:1
position: 3015583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3015583-3015655:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3015855-3016202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3023013-3023294:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3025246-3025353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3025457-3025483:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3026580-3026606:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3030223-3030252:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3030394-3030420:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3030866-3031044:1:exon

LOC117404795
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404795
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3031042..3059909
location: region:3031042-3059909:1
so has part: feature:3031042-3059909:1:exon

117404795
type: Gene
SIO_000068: ncbigene

position:3031042:1
position: 3031042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3059909:1
position: 3059909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3031042-3059909:1:exon

LOC117404795
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404795
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117404795
subclass of: SO_0000673
so part of: LOC117404795
location: 3031042..3031450
location: region:3031042-3031450:1
so has part: feature:3031042-3031450:1:exon

position:3031450:1
position: 3031450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3031042-3031450:1:exon

LOC117404795
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404795
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117404795
subclass of: SO_0000673
so part of: LOC117404795
location: 3035029..3035607
location: region:3035029-3035607:1
so has part: feature:3035029-3035607:1:exon

position:3035029:1
position: 3035029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3035607:1
position: 3035607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3035029-3035607:1:exon

LOC117404795
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404795
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117404795
subclass of: SO_0000673
so part of: LOC117404795
location: 3059281..3059909
location: region:3059281-3059909:1
so has part: feature:3059281-3059909:1:exon

position:3059281:1
position: 3059281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3059281-3059909:1:exon

LOC117404846
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404846
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3095097..4041347)
location: region:3095097-4041347:-1
so has part: feature:3095097-4041347:-1:exon
subclass of: SO_0000010

117404846
type: Gene
SIO_000068: ncbigene

position:3095097:-1
position: 3095097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4041347:-1
position: 4041347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3095097-4041347:-1:exon

LOC117404846
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404846
product: E3 ubiquitin-protein ligase TRIM38-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034910960.1
SIO_010081: LOC117404846
subclass of: SO_0000673
so part of: LOC117404846
location: complement(join(3095097..3095736,4036646..4037233,4038038..4038064,4038210..4038239,4038575..4038601,4041195..4041221,4041325..4041347))
location: region:3095097-4041347:-1
so has part: feature:4041325-4041347:-1:exon
so has part: feature:4041195-4041221:-1:exon
so has part: feature:4038575-4038601:-1:exon
so has part: feature:4038210-4038239:-1:exon
so has part: feature:4038038-4038064:-1:exon
so has part: feature:4036646-4037233:-1:exon
so has part: feature:3095097-3095736:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4041325-4041347:-1:exon

position:4041325:-1
position: 4041325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4041195-4041221:-1:exon

position:4041195:-1
position: 4041195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4041221:-1
position: 4041221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4038575-4038601:-1:exon

position:4038575:-1
position: 4038575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4038601:-1
position: 4038601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4038210-4038239:-1:exon

position:4038210:-1
position: 4038210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4038239:-1
position: 4038239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4038038-4038064:-1:exon

position:4038038:-1
position: 4038038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4038064:-1
position: 4038064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4036646-4037233:-1:exon

position:4036646:-1
position: 4036646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4037233:-1
position: 4037233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3095097-3095736:-1:exon

position:3095736:-1
position: 3095736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117404846
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404846
product: E3 ubiquitin-protein ligase TRIM38-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034910962.1
SIO_010081: LOC117404846
subclass of: SO_0000673
so part of: LOC117404846
location: complement(join(3095097..3095736,3828284..3828865,3829667..3829693,3829836..3831730))
location: region:3095097-3831730:-1
so has part: feature:3829836-3831730:-1:exon
so has part: feature:3829667-3829693:-1:exon
so has part: feature:3828284-3828865:-1:exon
so has part: feature:3095097-3095736:-1:exon

position:3831730:-1
position: 3831730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3829836-3831730:-1:exon

position:3829836:-1
position: 3829836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3829667-3829693:-1:exon

position:3829667:-1
position: 3829667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3829693:-1
position: 3829693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3828284-3828865:-1:exon

position:3828284:-1
position: 3828284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3828865:-1
position: 3828865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3095097-3095736:-1:exon

LOC117404846
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404846
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 3 member A3-like isoform X1
translation: MDAMERKAELLAVQHLREELESMKREVLKSEWKWILSSAVDSLTLDLDTAHPRLTLPVDGKEVRGKRQDYNSSQRFDYRRCVLGKEGFTSGRHYWELGVGENTFWRLGVSRESAPRKEEFSMTPQQGYWTVGWDGDEDKDEFIALTDPQTPLPRSLKPQKLGVYLDYEEGRLSFYNVETRSHIYTFTDMEFKPNEKLYPFFWTWDEKTDLALVSPGKMNDSSFFLLVWKWILAASVDVTLDPDTAHPELILSAEGKRVRWGWRQSLPDNPERFDVWRCVLGREGVTSGRRYWQVQVGGNTSWRLGVSREFAERKGGFNMTPQQGYWTVRWSDYRGFTALTDPETCLPLSLKPQKLGVYLDYEEGQLSFYNGETRSHIYTFTDMEFNPNEKLYPFFYTGDRNTALVL
SIO_010081: LOC117404846
subclass of: SO_0000673
so part of: LOC117404846
location: complement(join(3095222..3095736,4036646..4037233,4038038..4038064,4038210..4038239,4038575..4038601,4041195..4041221,4041325..4041331))
location: region:3095222-4041331:-1
so has part: feature:4041325-4041331:-1:exon
so has part: feature:4041195-4041221:-1:exon
so has part: feature:4038575-4038601:-1:exon
so has part: feature:4038210-4038239:-1:exon
so has part: feature:4038038-4038064:-1:exon
so has part: feature:4036646-4037233:-1:exon
so has part: feature:3095222-3095736:-1:exon

XP_034766851.1
type: Protein
SIO_000068: ncbiprotein

position:3095222:-1
position: 3095222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4041331:-1
position: 4041331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4041325-4041331:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4041195-4041221:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4038575-4038601:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4038210-4038239:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4038038-4038064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4036646-4037233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3095222-3095736:-1:exon

LOC117404846
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404846
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM38-like isoform X3
translation: MRRIPKSEWKWILSSAVDSLTLDLDTAHPRLTLPVDGKQVRRKTQDYNSSQRFDYRRCVLGKEGFTSGRHYWELGVGENTFWRLGVSRESAPRNEFSMTSQQGYWTVGWDGDEDKEFIALTDPQTPLPLSLKPQKLGVYLDYEEGWLSFYNVETRSHIYTFTDMKFKPNEKLYPFFWSWDEKTDLALVSPGKMNDSSLFLLVWKWILAASVDVTLDPDTAHPELILSAEGKRVRWGWRQSLPDNPERFDVWRCVLGREGVTSGRRYWQVQVGGNTSWRLGVSREFAERKGGFNMTPQQGYWTVRWSDYRGFTALTDPETCLPLSLKPQKLGVYLDYEEGQLSFYNGETRSHIYTFTDMEFNPNEKLYPFFYTGDRNTALVL
SIO_010081: LOC117404846
subclass of: SO_0000673
so part of: LOC117404846
location: complement(join(3095222..3095736,3828284..3828865,3829667..3829693,3829836..3829857))
location: region:3095222-3829857:-1
so has part: feature:3829836-3829857:-1:exon
so has part: feature:3829667-3829693:-1:exon
so has part: feature:3828284-3828865:-1:exon
so has part: feature:3095222-3095736:-1:exon

XP_034766853.1
type: Protein
SIO_000068: ncbiprotein

position:3829857:-1
position: 3829857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3829836-3829857:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3829667-3829693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3828284-3828865:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3095222-3095736:-1:exon

LOC117965909
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <3189867..3215592
location: region:3189867-3215592:1
so has part: feature:3189867-3215592:1:exon
subclass of: SO_0000010

117965909
type: Gene
SIO_000068: ncbigene

position:3189867:1
position: 3189867
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:3215592:1
position: 3215592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3189867-3215592:1:exon

LOC117965909
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965909
product: zinc finger protein 271-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911057.1
SIO_010081: LOC117965909
subclass of: SO_0000673
so part of: LOC117965909
location: join(<3189867..3190648,3214450..3215036,3215275..3215592)
location: region:3189867-3215592:1
so has part: feature:3189867-3190648:1:exon
so has part: feature:3214450-3215036:1:exon
so has part: feature:3215275-3215592:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3189867-3190648:1:exon

position:3190648:1
position: 3190648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3214450-3215036:1:exon

position:3214450:1
position: 3214450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3215036:1
position: 3215036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3215275-3215592:1:exon

position:3215275:1
position: 3215275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965909
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 271-like
translation: PDCGKGFTQLGHLNKTQRTHTGEKPYHCSDCGKSFNHFRNQKQHQRIHTGEKPYHCFDCGKSFSQLSSLVLHERIHTGEKPYHCSDCGKSFSQSNSLVLHQRTHTGEKPYHCSDCGKSFSRSDSLVSHQRTHTGEKPYHCSDCGKNFSRSGSLVSHQRTHTGEKPYRCSDCGKSFRQLGSLKEHQRVHTGEKPFHCSDCGRSFSQLGSLKGHQRTHTGEKPYHCSDCGRSFSQLGSLKGHQRTHTGEKPYHCSDCGKSFSCQSGTLKTHQRIHTGEKPYHCFECGVSFTVSGSLKTHQRIHTGEKPNHCTECGKSFVQLGDLKRHQRIHTGEKPYHCTECGESFRQIGSLKRHQRIHTGEKPRHCTECGKSFSELGHLKSHQRIHTGEKPYHCNECGQSFNQLGVLKRHQRIHTGEKPYYCTACGKSFRQSGDLKAHQRIHSGEKLYPCTECGERFMNEGGPQSESQS
SIO_010081: LOC117965909
subclass of: SO_0000673
so part of: LOC117965909
location: join(<3189867..3190648,3214450..3215036,3215275..3215312)
location: region:3189867-3215312:1
so has part: feature:3189867-3190648:1:exon
so has part: feature:3214450-3215036:1:exon
so has part: feature:3215275-3215312:1:exon

XP_034766948.1
type: Protein
SIO_000068: ncbiprotein

position:3215312:1
position: 3215312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3189867-3190648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3214450-3215036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3215275-3215312:1:exon

LOC117963000
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117963000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3225110..3281884)
location: region:3225110-3281884:-1
so has part: feature:3225110-3281884:-1:exon
subclass of: SO_0000010

117963000
type: Gene
SIO_000068: ncbigene

position:3225110:-1
position: 3225110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3281884:-1
position: 3281884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3225110-3281884:-1:exon

LOC117963000
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117963000
product: zinc finger protein 271-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911003.1
SIO_010081: LOC117963000
subclass of: SO_0000673
so part of: LOC117963000
location: complement(join(3225110..3225973,3259333..3260005,3281861..3281884))
location: region:3225110-3281884:-1
so has part: feature:3281861-3281884:-1:exon
so has part: feature:3259333-3260005:-1:exon
so has part: feature:3225110-3225973:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3281861-3281884:-1:exon

position:3281861:-1
position: 3281861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3259333-3260005:-1:exon

position:3259333:-1
position: 3259333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3260005:-1
position: 3260005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3225110-3225973:-1:exon

position:3225973:-1
position: 3225973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117963000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117963000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 271-like
translation: MAADCQSQSFNHFRNLKQHQRIHTGEKPYHCFDCGKSFSQLNSLVLHERIHTGEKPYHCSDCGKSFSQSNSLVLHQRIHTGEKPYHCSDCGKSFSRSDSLVSHQRTHTGEKPYHCSDCGKNFSRSGSLVSHQRTHTGEKPYRCSDCGKSFRQLGSLKEHQRVHTGEKPFHCSDCGRSFSQLGSLKGHQRTHTGEKPYHCSDCGRSFSHLGSLKGHQRTHTGEKPYHCSDCGKSFMQIGHLNKTQRTHTGEKPYHCSDCGKSFNHFRNLKQHQRIHTGEKPYHCFDCGKSFSQLNSLVLHERIHTGEKPYHCSDCGKSFSQSNSLVLHQRIHTGEKPYHCSDCGKSFSRSDSLVSHQRTHTGEKPYHCSDCGKNFSRSGSLVSHQRTHTGEKPYRCSDCGKSFRQLGSLKEHQRVHTGEKPFHCSDCGRSFSQLGSLKGHQRTHTGEKPYHCSDCGRSFSHLGSLKGHQRTHTGEKPYHCSDCGKSFSWSDSLVSHQRTHTGEKLCLL
SIO_010081: LOC117963000
subclass of: SO_0000673
so part of: LOC117963000
location: complement(join(3225147..3225973,3259333..3260005,3281861..3281884))
location: region:3225147-3281884:-1
so has part: feature:3281861-3281884:-1:exon
so has part: feature:3259333-3260005:-1:exon
so has part: feature:3225147-3225973:-1:exon

XP_034766894.1
type: Protein
SIO_000068: ncbiprotein

position:3225147:-1
position: 3225147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3281861-3281884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3259333-3260005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3225147-3225973:-1:exon

LOC117965876
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3283871..3369364
location: region:3283871-3369364:1
so has part: feature:3283871-3369364:1:exon

117965876
type: Gene
SIO_000068: ncbigene

position:3283871:1
position: 3283871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3369364:1
position: 3369364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3283871-3369364:1:exon

LOC117965876
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117965876
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 31% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117965876
subclass of: SO_0000673
so part of: LOC117965876
location: 3283871..3283904
location: region:3283871-3283904:1
so has part: feature:3283871-3283904:1:exon

position:3283904:1
position: 3283904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3283871-3283904:1:exon

LOC117965876
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117965876
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 31% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117965876
subclass of: SO_0000673
so part of: LOC117965876
location: 3336343..3336420
location: region:3336343-3336420:1
so has part: feature:3336343-3336420:1:exon

position:3336343:1
position: 3336343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3336420:1
position: 3336420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3336343-3336420:1:exon

LOC117965876
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117965876
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 31% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117965876
subclass of: SO_0000673
so part of: LOC117965876
location: 3338293..3338534
location: region:3338293-3338534:1
so has part: feature:3338293-3338534:1:exon

position:3338293:1
position: 3338293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3338534:1
position: 3338534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3338293-3338534:1:exon

LOC117965876
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117965876
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 31% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117965876
subclass of: SO_0000673
so part of: LOC117965876
location: 3367641..3368155
location: region:3367641-3368155:1
so has part: feature:3367641-3368155:1:exon

position:3367641:1
position: 3367641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3368155:1
position: 3368155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3367641-3368155:1:exon

LOC117965876
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117965876
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 31% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117965876
subclass of: SO_0000673
so part of: LOC117965876
location: 3368319..3369364
location: region:3368319-3369364:1
so has part: feature:3368319-3369364:1:exon

position:3368319:1
position: 3368319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3368319-3369364:1:exon

LOC117404814
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404814
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3389364..3491690
location: region:3389364-3491690:1
so has part: feature:3389364-3491690:1:exon

117404814
type: Gene
SIO_000068: ncbigene

position:3389364:1
position: 3389364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3491690:1
position: 3491690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3389364-3491690:1:exon

LOC117404814
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404814
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins
pseudo: true
SIO_010081: LOC117404814
subclass of: SO_0000673
so part of: LOC117404814
location: 3389364..3389754
location: region:3389364-3389754:1
so has part: feature:3389364-3389754:1:exon

position:3389754:1
position: 3389754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3389364-3389754:1:exon

LOC117404814
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404814
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins
pseudo: true
SIO_010081: LOC117404814
subclass of: SO_0000673
so part of: LOC117404814
location: 3389977..3390546
location: region:3389977-3390546:1
so has part: feature:3389977-3390546:1:exon

position:3389977:1
position: 3389977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3390546:1
position: 3390546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3389977-3390546:1:exon

LOC117404814
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404814
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins
pseudo: true
SIO_010081: LOC117404814
subclass of: SO_0000673
so part of: LOC117404814
location: 3413934..3413950
location: region:3413934-3413950:1
so has part: feature:3413934-3413950:1:exon

position:3413934:1
position: 3413934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3413950:1
position: 3413950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3413934-3413950:1:exon

LOC117965877
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965877
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3462786..3464282)
location: region:3462786-3464282:-1
so has part: feature:3462786-3464282:-1:exon
subclass of: SO_0000010

117965877
type: Gene
SIO_000068: ncbigene

position:3462786:-1
position: 3462786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3464282:-1
position: 3464282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3462786-3464282:-1:exon

LOC117965877
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965877
product: zinc finger protein 436-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911004.1
SIO_010081: LOC117965877
subclass of: SO_0000673
so part of: LOC117965877
location: complement(3462786..3464282)
location: region:3462786-3464282:-1
so has part: feature:3462786-3464282:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3462786-3464282:-1:exon

LOC117965877
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965877
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 436-like
translation: MQIGHLNKTQRTHTGEKPYCCTDCGKSFRQSNSLVLHQRTHTGEKPCHCSDCGKSFSRSDSLVSHQRTHTGEKPYQCSDCGKSFSRSDSLVSHQRTHTGEKPYYCSDCGNSFSRSDHLVSHQRTHTGEKPYHCSDCGNSFSRSDHLVSHQRTHTGEKPYHCFDCGKSFRQLGSLKEHQRVHTGEKPYHCSDCGKSFSQLGSLKGHQRTHTGEKPYHCSDCGKSFRQLGRLKGHQRTHTGEKPYHCSDCGKSFSQLGSLKKHQRVHTGEKLCCCSDCRKSFHLKQAVQKHQRIHRGEEP
SIO_010081: LOC117965877
subclass of: SO_0000673
so part of: LOC117965877
location: complement(3463386..3464282)
location: region:3463386-3464282:-1
so has part: feature:3463386-3464282:-1:exon

XP_034766895.1
type: Protein
SIO_000068: ncbiprotein

position:3463386:-1
position: 3463386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3463386-3464282:-1:exon

LOC117404814
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404814
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins
pseudo: true
SIO_010081: LOC117404814
subclass of: SO_0000673
so part of: LOC117404814
location: 3490054..3491690
location: region:3490054-3491690:1
so has part: feature:3490054-3491690:1:exon

position:3490054:1
position: 3490054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3490054-3491690:1:exon

LOC117965830
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3659031..3664039
location: region:3659031-3664039:1
so has part: feature:3659031-3664039:1:exon
subclass of: SO_0000010

117965830
type: Gene
SIO_000068: ncbigene

position:3659031:1
position: 3659031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3664039:1
position: 3664039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3659031-3664039:1:exon

LOC117965830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965830
product: killer cell lectin-like receptor subfamily F member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034910980.1
SIO_010081: LOC117965830
subclass of: SO_0000673
so part of: LOC117965830
location: join(3659031..3659155,3659537..3659635,3660002..3660154,3660433..3660587,3663062..3663165,3663309..3664039)
location: region:3659031-3664039:1
so has part: feature:3659031-3659155:1:exon
so has part: feature:3659537-3659635:1:exon
so has part: feature:3660002-3660154:1:exon
so has part: feature:3660433-3660587:1:exon
so has part: feature:3663062-3663165:1:exon
so has part: feature:3663309-3664039:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3659031-3659155:1:exon

position:3659155:1
position: 3659155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3659537-3659635:1:exon

position:3659537:1
position: 3659537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3659635:1
position: 3659635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3660002-3660154:1:exon

position:3660002:1
position: 3660002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3660154:1
position: 3660154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3660433-3660587:1:exon

position:3660433:1
position: 3660433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3660587:1
position: 3660587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3663062-3663165:1:exon

position:3663062:1
position: 3663062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3663165:1
position: 3663165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3663309-3664039:1:exon

position:3663309:1
position: 3663309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: killer cell lectin-like receptor subfamily F member 1
translation: MAEEVTYADIKFSKIPAAGTGAPNSTATSPPLEDKAVPPVEPTSQSRVTIALGVTVGVLLLAVIVMGTAIGLQVHHNHSSSQSTSPPCLENCNDVITRELSKYKKGLRQRLCVDPNTGKEVESCAVCLDGWRKGYNGSCYFLSTEQKSWNFANESCSKLGAHLAVIENKEELDTIHRAIPSNSICWIGLRRKDPHWLWVDGTQLDEKISVSTQHRGYHCASVYGSGVYAESCNTVYPWICEQDAVRF
SIO_010081: LOC117965830
subclass of: SO_0000673
so part of: LOC117965830
location: join(3659047..3659155,3659537..3659635,3660002..3660154,3660433..3660587,3663062..3663165,3663309..3663432)
location: region:3659047-3663432:1
so has part: feature:3659047-3659155:1:exon
so has part: feature:3659537-3659635:1:exon
so has part: feature:3660002-3660154:1:exon
so has part: feature:3660433-3660587:1:exon
so has part: feature:3663062-3663165:1:exon
so has part: feature:3663309-3663432:1:exon

XP_034766871.1
type: Protein
SIO_000068: ncbiprotein

position:3659047:1
position: 3659047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3663432:1
position: 3663432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3659047-3659155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3659537-3659635:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3660002-3660154:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3660433-3660587:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3663062-3663165:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3663309-3663432:1:exon

LOC117404846
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404846
product: E3 ubiquitin-protein ligase TRIM38-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034910961.1
SIO_010081: LOC117404846
subclass of: SO_0000673
so part of: LOC117404846
location: complement(join(3816141..3816922,3828284..3828865,3829667..3829693,3829836..3831730))
location: region:3816141-3831730:-1
so has part: feature:3829836-3831730:-1:exon
so has part: feature:3829667-3829693:-1:exon
so has part: feature:3828284-3828865:-1:exon
so has part: feature:3816141-3816922:-1:exon

position:3816141:-1
position: 3816141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3829836-3831730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3829667-3829693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3828284-3828865:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3816141-3816922:-1:exon

position:3816922:-1
position: 3816922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117404846
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404846
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM38-like isoform X2
translation: MRRIPKSEWKWILSSAVDSLTLDLDTAHPRLTLPVDGKQVRRKTQDYNSSQRFDYRRCVLGKEGFTSGRHYWELGVGENTFWRLGVSRESAPRNEFSMTSQQGYWTVGWDGDEDKEFIALTDPQTPLPLSLKPQKLGVYLDYEEGWLSFYNVETRSHIYTFTDMKFKPNEKLYPFFWSWDEKTDLALVSPGKMNDSSLFLLVWKWILAASVEVTLDPDTAHPELTLSAEGKQVRKEKTRQDLPDTPERFDDRPCVLGREGFTSGRRYWQVQVGKNTRWRLGVSTESAERKGEFSMIPQQGYWTVEWRSGGEFTALTDPRTPLSRSLKPQKLGVYLDYEEGQLSFYNVETRSHIYTFTDMDFKPNEKLYPFFYTSCLTDPVLVSPDPDPDPVSAAD
SIO_010081: LOC117404846
subclass of: SO_0000673
so part of: LOC117404846
location: complement(join(3816366..3816922,3828284..3828865,3829667..3829693,3829836..3829857))
location: region:3816366-3829857:-1
so has part: feature:3829836-3829857:-1:exon
so has part: feature:3829667-3829693:-1:exon
so has part: feature:3828284-3828865:-1:exon
so has part: feature:3816366-3816922:-1:exon

XP_034766852.1
type: Protein
SIO_000068: ncbiprotein

position:3816366:-1
position: 3816366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3829836-3829857:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3829667-3829693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3828284-3828865:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3816366-3816922:-1:exon

LOC117965828
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3934278..3941349
location: region:3934278-3941349:1
so has part: feature:3934278-3941349:1:exon
subclass of: SO_0000010

117965828
type: Gene
SIO_000068: ncbigene

position:3934278:1
position: 3934278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3941349:1
position: 3941349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3934278-3941349:1:exon

LOC117965828
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965828
product: E3 ubiquitin-protein ligase TRIM39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034910977.1
SIO_010081: LOC117965828
subclass of: SO_0000673
so part of: LOC117965828
location: join(3934278..3934448,3934591..3934617,3935454..3936041,3940529..3941349)
location: region:3934278-3941349:1
so has part: feature:3934278-3934448:1:exon
so has part: feature:3934591-3934617:1:exon
so has part: feature:3935454-3936041:1:exon
so has part: feature:3940529-3941349:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3934278-3934448:1:exon

position:3934448:1
position: 3934448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3934591-3934617:1:exon

position:3934591:1
position: 3934591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3934617:1
position: 3934617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3935454-3936041:1:exon

position:3935454:1
position: 3935454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3936041:1
position: 3936041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3940529-3941349:1:exon

position:3940529:1
position: 3940529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965828
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: MTPQQGYWTVGWDGDEDKDEFIALTDPQTPLPLSLKPQKLGVYLDYEEGRLSFYNVETRSHIYTFTDMEFKPNEKLYPFFWTWDEKTDLALVSPRKMNDSSFFLLVWKWILAASVDVTLDPDTAHPRLTLSAEGKRVRMGETRQDLPDNPERFDVWRCVLGRESFTSGRHYWQVQVGGNTQWRLGVSKESAERKGGISMTPQQGYWTVRWSGGEFTAHTDPQTPLPRSLKPQKLGVYLDYEEGQLSFYNVETRSHIYTFTDMEFNPNEKLYPLFCTVDENTDLVLESPDPDPVSAAD
SIO_010081: LOC117965828
subclass of: SO_0000673
so part of: LOC117965828
location: join(3935699..3936041,3940529..3941079)
location: region:3935699-3941079:1
so has part: feature:3935699-3936041:1:exon
so has part: feature:3940529-3941079:1:exon

XP_034766868.1
type: Protein
SIO_000068: ncbiprotein

position:3935699:1
position: 3935699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3941079:1
position: 3941079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3935699-3936041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3940529-3941079:1:exon

LOC117965829
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3969957..3982807
location: region:3969957-3982807:1
so has part: feature:3969957-3982807:1:exon
subclass of: SO_0000010

117965829
type: Gene
SIO_000068: ncbigene

position:3969957:1
position: 3969957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3982807:1
position: 3982807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3969957-3982807:1:exon

LOC117965829
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965829
product: NAD(P)(+)--arginine ADP-ribosyltransferase 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034910978.1
SIO_010081: LOC117965829
subclass of: SO_0000673
so part of: LOC117965829
location: join(3969957..3970042,3970142..3970246,3980679..3981357,3982417..3982807)
location: region:3969957-3982807:1
so has part: feature:3969957-3970042:1:exon
so has part: feature:3970142-3970246:1:exon
so has part: feature:3980679-3981357:1:exon
so has part: feature:3982417-3982807:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3969957-3970042:1:exon

position:3970042:1
position: 3970042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3970142-3970246:1:exon

position:3970142:1
position: 3970142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3970246:1
position: 3970246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3980679-3981357:1:exon

position:3980679:1
position: 3980679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3981357:1
position: 3981357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3982417-3982807:1:exon

position:3982417:1
position: 3982417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965829
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7906
gene: LOC117965829
product: NAD(P)(+)--arginine ADP-ribosyltransferase 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004661530.1
SIO_010081: LOC117965829
so part of: LOC117965829
location: join(3969957..3970042,3970142..3970246,3982417..3982807)
location: region:3969957-3982807:1
so has part: feature:3969957-3970042:1:exon
so has part: feature:3970142-3970246:1:exon
so has part: feature:3982417-3982807:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3969957-3970042:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3970142-3970246:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3982417-3982807:1:exon

LOC117965829
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD(P)(+)--arginine ADP-ribosyltransferase 1-like
translation: MALSFMKFSLGFFALLLAAQFVTPDRTDCQNSNILMDFADGTLDDQYNNCENEMLKKVKSEYLPAELEQDQTFRKAWINATTAMNKKLHPDLTLEEAAAIHLYTMEVLHCKFNEAVRTGGVDYTAFPYKSFHFYLTTALKKVKSNNKACYKVYRGTTKSTTVTVGETVRFGRFASSSTEPDEAKIFGTRTMFTVYTCQGVDIKNYSMFPTEEEVLIPPFEQFKVKSVTGPENSRTIEVIQLGNTESVYNCEAFRSSWKVIVGATVGSIVGVAATGGACFYLYKRRAD
SIO_010081: LOC117965829
subclass of: SO_0000673
so part of: LOC117965829
location: join(3970169..3970246,3980679..3981357,3982417..3982523)
location: region:3970169-3982523:1
so has part: feature:3970169-3970246:1:exon
so has part: feature:3980679-3981357:1:exon
so has part: feature:3982417-3982523:1:exon

XP_034766869.1
type: Protein
SIO_000068: ncbiprotein

position:3970169:1
position: 3970169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3982523:1
position: 3982523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3970169-3970246:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3980679-3981357:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3982417-3982523:1:exon

LOC117965833
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965833
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<4041413..4788165)
location: region:4041413-4788165:-1
so has part: feature:4041413-4788165:-1:exon
subclass of: SO_0000010

117965833
type: Gene
SIO_000068: ncbigene

position:4041413:-1
position: 4041413
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:4788165:-1
position: 4788165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4041413-4788165:-1:exon

LOC117965833
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965833
product: butyrophilin-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034910983.1
SIO_010081: LOC117965833
subclass of: SO_0000673
so part of: LOC117965833
location: complement(join(<4041413..4041432,4041785..4042066,4042721..4043059,4043335..4043408,4787958..4788165))
location: region:4041413-4788165:-1
so has part: feature:4787958-4788165:-1:exon
so has part: feature:4043335-4043408:-1:exon
so has part: feature:4042721-4043059:-1:exon
so has part: feature:4041785-4042066:-1:exon
so has part: feature:4041413-4041432:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4787958-4788165:-1:exon

position:4787958:-1
position: 4787958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4043335-4043408:-1:exon

position:4043335:-1
position: 4043335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4043408:-1
position: 4043408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4042721-4043059:-1:exon

position:4042721:-1
position: 4042721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4043059:-1
position: 4043059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4041785-4042066:-1:exon

position:4041785:-1
position: 4041785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4042066:-1
position: 4042066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4041413-4041432:-1:exon

position:4041432:-1
position: 4041432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965833
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965833
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin-like protein 2
translation: MKMRFLGRTCLIVLSLLPAVSTQDAWRVVGSDQPVIAEPGDDVILPCHISPRVSAVDMEVRWYRDRFDTPVHLYLKKKDKLGRQDIPYRDRTALSPSALERGDISLYLRNLQPADTGIYKCYADNHDEGLTELIVTALGTQPSISMDSTQGEQTRLVCRSEGWSPEPEVIWRDRDGNNVTSLSSPTVQSDSQGFLSVSSYIKIKQQSNVFSCLVRSKTPKPDWESKLHISSDFFPGV
SIO_010081: LOC117965833
subclass of: SO_0000673
so part of: LOC117965833
location: complement(join(<4041413..4041432,4041785..4042066,4042721..4043059,4043335..4043404))
location: region:4041413-4043404:-1
so has part: feature:4043335-4043404:-1:exon
so has part: feature:4042721-4043059:-1:exon
so has part: feature:4041785-4042066:-1:exon
so has part: feature:4041413-4041432:-1:exon

XP_034766874.1
type: Protein
SIO_000068: ncbiprotein

position:4043404:-1
position: 4043404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4043335-4043404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4042721-4043059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4041785-4042066:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4041413-4041432:-1:exon

LOC117404827
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4091301..4141206
location: region:4091301-4141206:1
so has part: feature:4091301-4141206:1:exon

117404827
type: Gene
SIO_000068: ncbigene

position:4091301:1
position: 4091301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4141206:1
position: 4141206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4091301-4141206:1:exon

LOC117404827
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404827
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117404827
subclass of: SO_0000673
so part of: LOC117404827
location: 4091301..4091314
location: region:4091301-4091314:1
so has part: feature:4091301-4091314:1:exon

position:4091314:1
position: 4091314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4091301-4091314:1:exon

trnat-cgu
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnat-cgu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(4120433..4120504)
location: region:4120433-4120504:-1
so has part: feature:4120433-4120504:-1:exon
subclass of: SO_0000663

117965940
type: Gene
SIO_000068: ncbigene

position:4120433:-1
position: 4120433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4120504:-1
position: 4120504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4120433-4120504:-1:exon

trnat-cgu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnat-cgu
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon CGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(4120470..4120472),aa:Thr, seq:cgt)
SIO_010081: trnat-cgu
subclass of: SO_0000673
so part of: trnat-cgu
location: complement(4120433..4120504)
location: region:4120433-4120504:-1
so has part: feature:4120433-4120504:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4120433-4120504:-1:exon

trnah-gug
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnah-gug
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(4121629..4121700)
location: region:4121629-4121700:-1
so has part: feature:4121629-4121700:-1:exon
subclass of: SO_0000663

117965941
type: Gene
SIO_000068: ncbigene

position:4121629:-1
position: 4121629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4121700:-1
position: 4121700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4121629-4121700:-1:exon

trnah-gug
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnah-gug
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(4121665..4121667),aa:His, seq:gtg)
SIO_010081: trnah-gug
subclass of: SO_0000673
so part of: trnah-gug
location: complement(4121629..4121700)
location: region:4121629-4121700:-1
so has part: feature:4121629-4121700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4121629-4121700:-1:exon

LOC117404827
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404827
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117404827
subclass of: SO_0000673
so part of: LOC117404827
location: 4124868..4124997
location: region:4124868-4124997:1
so has part: feature:4124868-4124997:1:exon

position:4124868:1
position: 4124868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4124997:1
position: 4124997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4124868-4124997:1:exon

LOC117404827
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404827
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117404827
subclass of: SO_0000673
so part of: LOC117404827
location: 4128433..4128514
location: region:4128433-4128514:1
so has part: feature:4128433-4128514:1:exon

position:4128433:1
position: 4128433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4128514:1
position: 4128514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4128433-4128514:1:exon

LOC117404827
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404827
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117404827
subclass of: SO_0000673
so part of: LOC117404827
location: 4134171..4134877
location: region:4134171-4134877:1
so has part: feature:4134171-4134877:1:exon

position:4134171:1
position: 4134171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4134877:1
position: 4134877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4134171-4134877:1:exon

LOC117404827
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404827
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117404827
subclass of: SO_0000673
so part of: LOC117404827
location: 4136370..4141206
location: region:4136370-4141206:1
so has part: feature:4136370-4141206:1:exon

position:4136370:1
position: 4136370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4136370-4141206:1:exon

LOC117404826
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4223569..4235346
location: region:4223569-4235346:1
so has part: feature:4223569-4235346:1:exon
subclass of: SO_0000010

117404826
type: Gene
SIO_000068: ncbigene

position:4223569:1
position: 4223569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4235346:1
position: 4235346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4223569-4235346:1:exon

LOC117404826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404826
product: uncharacterized LOC117404826
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911023.1
SIO_010081: LOC117404826
subclass of: SO_0000673
so part of: LOC117404826
location: join(4223569..4223607,4223842..4223897,4224454..4224543,4224794..4224918,4225275..4225418,4226089..4226166,4226861..4227031,4227823..4227919,4228410..4228633,4229200..4229353,4229614..4229822,4230114..4230231,4230505..4230680,4231074..4231191,4231816..4231985,4232215..4232312,4232476..4232615,4232988..4233035,4233238..4233421,4233512..4233650,4233824..4233911,4234332..4234430,4235252..4235346)
location: region:4223569-4235346:1
so has part: feature:4223569-4223607:1:exon
so has part: feature:4223842-4223897:1:exon
so has part: feature:4224454-4224543:1:exon
so has part: feature:4224794-4224918:1:exon
so has part: feature:4225275-4225418:1:exon
so has part: feature:4226089-4226166:1:exon
so has part: feature:4226861-4227031:1:exon
so has part: feature:4227823-4227919:1:exon
so has part: feature:4228410-4228633:1:exon
so has part: feature:4229200-4229353:1:exon
so has part: feature:4229614-4229822:1:exon
so has part: feature:4230114-4230231:1:exon
so has part: feature:4230505-4230680:1:exon
so has part: feature:4231074-4231191:1:exon
so has part: feature:4231816-4231985:1:exon
so has part: feature:4232215-4232312:1:exon
so has part: feature:4232476-4232615:1:exon
so has part: feature:4232988-4233035:1:exon
so has part: feature:4233238-4233421:1:exon
so has part: feature:4233512-4233650:1:exon
so has part: feature:4233824-4233911:1:exon
so has part: feature:4234332-4234430:1:exon
so has part: feature:4235252-4235346:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4223569-4223607:1:exon

position:4223607:1
position: 4223607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4223842-4223897:1:exon

position:4223842:1
position: 4223842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4223897:1
position: 4223897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4224454-4224543:1:exon

position:4224454:1
position: 4224454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4224543:1
position: 4224543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4224794-4224918:1:exon

position:4224794:1
position: 4224794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4224918:1
position: 4224918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4225275-4225418:1:exon

position:4225275:1
position: 4225275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4225418:1
position: 4225418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4226089-4226166:1:exon

position:4226089:1
position: 4226089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4226166:1
position: 4226166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4226861-4227031:1:exon

position:4226861:1
position: 4226861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4227031:1
position: 4227031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4227823-4227919:1:exon

position:4227823:1
position: 4227823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4227919:1
position: 4227919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4228410-4228633:1:exon

position:4228410:1
position: 4228410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4228633:1
position: 4228633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4229200-4229353:1:exon

position:4229200:1
position: 4229200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4229353:1
position: 4229353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4229614-4229822:1:exon

position:4229614:1
position: 4229614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4229822:1
position: 4229822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4230114-4230231:1:exon

position:4230114:1
position: 4230114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4230231:1
position: 4230231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4230505-4230680:1:exon

position:4230505:1
position: 4230505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4230680:1
position: 4230680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4231074-4231191:1:exon

position:4231074:1
position: 4231074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4231191:1
position: 4231191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4231816-4231985:1:exon

position:4231816:1
position: 4231816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4231985:1
position: 4231985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4232215-4232312:1:exon

position:4232215:1
position: 4232215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4232312:1
position: 4232312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4232476-4232615:1:exon

position:4232476:1
position: 4232476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4232615:1
position: 4232615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4232988-4233035:1:exon

position:4232988:1
position: 4232988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4233035:1
position: 4233035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4233238-4233421:1:exon

position:4233238:1
position: 4233238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4233421:1
position: 4233421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4233512-4233650:1:exon

position:4233512:1
position: 4233512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4233650:1
position: 4233650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4233824-4233911:1:exon

position:4233824:1
position: 4233824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4233911:1
position: 4233911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4234332-4234430:1:exon

position:4234332:1
position: 4234332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4234430:1
position: 4234430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4235252-4235346:1:exon

position:4235252:1
position: 4235252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117404826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117404826
translation: MGFRLLLGVAWLCAVLPAGLVAQDLSGNFVTECRDRYFWMSTNGKFAGGNFRFDVIDRSGVYPLNDSYAAACGFTYSFNLPGDLIFRASFLACHVESVNDVSYALQYRFVRLDSLGRETVYPFSLSCSTESPWNPREIVCEDNYMEVSVRKNVPVIAQEGLEKEDWEAALSIAQGAVMSVWQVVFHKTGMPPKTMTAADARTAGYLVNSTSSRVIFRSPYGMPMSEVLLVSGIPVEVVRATVFYKQRWMLLLVDTSAACAKNPSVFDGTYLSWVTPRLITPLVLHPTKFLDKRITMGVEGRGLDEVAATSRGYQLLVNRTAVEIRIPFGAVGGYRKSHVIDNKYNQMYEIDLFLEHQWADDLWEVTQHRSFKPARSPYLPETPYVVNNTVPSEKGFTVTLGNFKPDVELKNLTLNGVPLTLPEAQNRGVKISEVQHPNGTKDFVLKVPFNNLLVSAEYIGALIRRYTLNINYTLNIVPQNESYFHPAAIVCDVKDVNLPDVKSFCTNRSVVFEVTPGNMDSSWELCIGSRPLPYTIVEPKITIELPLFSIGYIYEDISLRGLTVRVELNMRNVKTLQVEKQFVQRCPIPTRELLVCFPNGVVTVVAVTMEPIPLVDPSKTTLLDKTCKPKEFDSTRALFTFGVNTCGTRSQIVGNYLIYENEVLYTRALFPPNAPVITRDSEYRLTIRCRYPLNDTLTLAAERKAVPAPAPYSVRGLGSLHVRSYDPMSRAKSPRDVLNLKARLARDVSYSQFYSAFPVSQSLLEPVFLQVELQQPHSQTDRLILQDCWATLTPELDSSPQWDLVTDRCLVTGDSYRTHFHPVPASTLTRSSPQLQRLEVRAQQSSKDSAFWRQVYFHCMAVVCDPNLEDTCNKTCVPGAQRSARSVDRYSQIRGYISAGPVQLVPEGQVLDLQTAGDSLLVLALGVASALLGVLLVILVAVGLRRC
SIO_010081: LOC117404826
subclass of: SO_0000673
so part of: LOC117404826
location: join(4223585..4223607,4223842..4223897,4224454..4224543,4224794..4224918,4225275..4225418,4226089..4226166,4226861..4227031,4227823..4227919,4228410..4228633,4229200..4229353,4229614..4229822,4230114..4230231,4230505..4230680,4231074..4231191,4231816..4231985,4232215..4232312,4232476..4232615,4232988..4233035,4233238..4233421,4233512..4233650,4233824..4233911,4234332..4234430,4235252..4235346)
location: region:4223585-4235346:1
so has part: feature:4223585-4223607:1:exon
so has part: feature:4223842-4223897:1:exon
so has part: feature:4224454-4224543:1:exon
so has part: feature:4224794-4224918:1:exon
so has part: feature:4225275-4225418:1:exon
so has part: feature:4226089-4226166:1:exon
so has part: feature:4226861-4227031:1:exon
so has part: feature:4227823-4227919:1:exon
so has part: feature:4228410-4228633:1:exon
so has part: feature:4229200-4229353:1:exon
so has part: feature:4229614-4229822:1:exon
so has part: feature:4230114-4230231:1:exon
so has part: feature:4230505-4230680:1:exon
so has part: feature:4231074-4231191:1:exon
so has part: feature:4231816-4231985:1:exon
so has part: feature:4232215-4232312:1:exon
so has part: feature:4232476-4232615:1:exon
so has part: feature:4232988-4233035:1:exon
so has part: feature:4233238-4233421:1:exon
so has part: feature:4233512-4233650:1:exon
so has part: feature:4233824-4233911:1:exon
so has part: feature:4234332-4234430:1:exon
so has part: feature:4235252-4235346:1:exon

XP_034766914.1
type: Protein
SIO_000068: ncbiprotein

position:4223585:1
position: 4223585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4223585-4223607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4223842-4223897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4224454-4224543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4224794-4224918:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4225275-4225418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4226089-4226166:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4226861-4227031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4227823-4227919:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4228410-4228633:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4229200-4229353:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4229614-4229822:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4230114-4230231:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4230505-4230680:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4231074-4231191:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4231816-4231985:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4232215-4232312:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4232476-4232615:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4232988-4233035:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4233238-4233421:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4233512-4233650:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4233824-4233911:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4234332-4234430:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4235252-4235346:1:exon

LOC117965887
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965887
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4242400..4251047)
location: region:4242400-4251047:-1
so has part: feature:4242400-4251047:-1:exon
subclass of: SO_0000010

117965887
type: Gene
SIO_000068: ncbigene

position:4242400:-1
position: 4242400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4251047:-1
position: 4251047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4242400-4251047:-1:exon

LOC117965887
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965887
product: zinc finger protein 135-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911024.1
SIO_010081: LOC117965887
subclass of: SO_0000673
so part of: LOC117965887
location: complement(join(4242400..4243206,4249922..4250284,4251027..4251047))
location: region:4242400-4251047:-1
so has part: feature:4251027-4251047:-1:exon
so has part: feature:4249922-4250284:-1:exon
so has part: feature:4242400-4243206:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4251027-4251047:-1:exon

position:4251027:-1
position: 4251027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4249922-4250284:-1:exon

position:4249922:-1
position: 4249922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4250284:-1
position: 4250284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4242400-4243206:-1:exon

position:4243206:-1
position: 4243206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965887
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965887
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 135-like
translation: MESGVGELIHTREKRHVCADCGRSFRQLQNLKRHQRIHTGEKPYVCADCGRSFSQLQNLKLHQRIHTGEKPHVCAVCGKSFRLSGDLNTHHRIHTGEKPYPCSRCGKSFRRLGKLKTHQLIHSGEKPHSSLQGSLSCTECGKSFSRLQNLKLHQRIHTGEKRHVCADCGKSFRQSSHLNMHQRIHTGEKPHVCADCGKSFSLSGNFKMHRRIHTGEKPNICVDCGMSFRRLASLKEHQRIHTGENPYVCCDCGKSFSQLSNLKLHLRIHTGEKPHVCADCGKSFSLSGNLKMHQRTHTGEKPNVCADCGKSFRTLGNLKDHQRIHTGEKPYACADCGKSFSQSRTLKNHQLIHTGEKPHHCHDCGKSFRWKFKLKLHQRIHTGENPQICPDWCGMK
SIO_010081: LOC117965887
subclass of: SO_0000673
so part of: LOC117965887
location: complement(join(4242400..4243206,4249922..4250284,4251027..4251047))
location: region:4242400-4251047:-1
so has part: feature:4251027-4251047:-1:exon
so has part: feature:4249922-4250284:-1:exon
so has part: feature:4242400-4243206:-1:exon

XP_034766915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4251027-4251047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4249922-4250284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4242400-4243206:-1:exon

LOC117965822
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965822
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <4268981..>4749510
location: region:4268981-4749510:1
so has part: feature:4268981-4749510:1:exon
subclass of: SO_0000010

117965822
type: Gene
SIO_000068: ncbigene

position:4268981:1
position: 4268981
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:4749510:1
position: 4749510
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4268981-4749510:1:exon

LOC117965822
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965822
product: zinc finger protein 850-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 27% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034910954.1
SIO_010081: LOC117965822
subclass of: SO_0000673
so part of: LOC117965822
location: join(<4268981..4269442,4309918..4310530,4588319..4588323,4748382..>4749510)
location: region:4268981-4749510:1
so has part: feature:4268981-4269442:1:exon
so has part: feature:4309918-4310530:1:exon
so has part: feature:4588319-4588323:1:exon
so has part: feature:4748382-4749510:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4268981-4269442:1:exon

position:4269442:1
position: 4269442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4309918-4310530:1:exon

position:4309918:1
position: 4309918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4310530:1
position: 4310530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4588319-4588323:1:exon

position:4588319:1
position: 4588319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4588323:1
position: 4588323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4748382-4749510:1:exon

position:4748382:1
position: 4748382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965822
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965822
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 850-like
translation: GKSFNHISLLKRHQRIHTGEKPSHIQSSDKSFTQLGNLHSHQRIHTGEKPHHCTECGKRFSQLGDLKRHHQIHTGEKPYHCAVCGKRFSQLGDLKRHHQIHTGEKPYHCDVCGKRFSQSGDLKRHHQIHTGEKSHHCSECGKTFIHIGNLKKHKRTHTGEKPYCCTDCGKSFSQSNSLVLHQRIHTGEKPYHCSDCGKSFSQSNSLVFHQRTHTGEKQYHCSDCGKSFSRSGSLVLHKRTHTGEKPYHCSDCGKSFSQSNSLVLHQRTHTGEKPYRCSDCGKSFRQLCSLVAHQRTHTGEKPYHCSDCGKSFSQLGSLKGHQRTHTGEKLYHCSDCGKSFSRSDSLVSHQRTHTGEKLYECNKCGQSFSKPGSLKTHQQSHTGEKPHHCTECGKSFRELAVLKRHQRLHTGEKPYQCTECGKCFNASGSLKRHQRLHTGEKPYHCFECGKSFTEKGKLKKHQRIHTGEKPYQCTECGKSFNASGNLKKHQRIHTGEKPYQCTECGKSFNASGNLKTHQRLHTREKPYQCTECGESFTNKGKLKIHQRIHTGEKPYQCTECGESFSESGNLNKHQRIHTGEKPYHCSECGKSFKLHTGEKETKKHQRIHTGEKPYHCVECGESFSESGNLNKHQRIHTGEKPYQCTECGKSFTDKGKLKKHQRIHTGEKPYHCVECGESFSESGNLNKHQRIHTGEKPYHCVECGESFRQSGTLKIHQRIHTGEKPYHCVECGESF
SIO_010081: LOC117965822
subclass of: SO_0000673
so part of: LOC117965822
location: join(<4268981..4269442,4309918..4310530,4588319..4588323,4748382..>4749510)
location: region:4268981-4749510:1
so has part: feature:4268981-4269442:1:exon
so has part: feature:4309918-4310530:1:exon
so has part: feature:4588319-4588323:1:exon
so has part: feature:4748382-4749510:1:exon

XP_034766845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4268981-4269442:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4309918-4310530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4588319-4588323:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4748382-4749510:1:exon

LOC117962994
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4275565..4287214)
location: region:4275565-4287214:-1
so has part: feature:4275565-4287214:-1:exon

117962994
type: Gene
SIO_000068: ncbigene

position:4275565:-1
position: 4275565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4287214:-1
position: 4287214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4275565-4287214:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4275565..4275697)
location: region:4275565-4275697:-1
so has part: feature:4275565-4275697:-1:exon

position:4275697:-1
position: 4275697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4275565-4275697:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4276595..4276693)
location: region:4276595-4276693:-1
so has part: feature:4276595-4276693:-1:exon

position:4276595:-1
position: 4276595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4276693:-1
position: 4276693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4276595-4276693:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4277111..4277218)
location: region:4277111-4277218:-1
so has part: feature:4277111-4277218:-1:exon

position:4277111:-1
position: 4277111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4277218:-1
position: 4277218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4277111-4277218:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4277368..4277510)
location: region:4277368-4277510:-1
so has part: feature:4277368-4277510:-1:exon

position:4277368:-1
position: 4277368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4277510:-1
position: 4277510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4277368-4277510:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4277598..4277781)
location: region:4277598-4277781:-1
so has part: feature:4277598-4277781:-1:exon

position:4277598:-1
position: 4277598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4277781:-1
position: 4277781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4277598-4277781:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4277985..4278032)
location: region:4277985-4278032:-1
so has part: feature:4277985-4278032:-1:exon

position:4277985:-1
position: 4277985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4278032:-1
position: 4278032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4277985-4278032:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4278408..4278547)
location: region:4278408-4278547:-1
so has part: feature:4278408-4278547:-1:exon

position:4278408:-1
position: 4278408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4278547:-1
position: 4278547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4278408-4278547:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4278711..4278808)
location: region:4278711-4278808:-1
so has part: feature:4278711-4278808:-1:exon

position:4278711:-1
position: 4278711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4278808:-1
position: 4278808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4278711-4278808:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4279039..4279208)
location: region:4279039-4279208:-1
so has part: feature:4279039-4279208:-1:exon

position:4279039:-1
position: 4279039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4279208:-1
position: 4279208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4279039-4279208:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4279838..4279955)
location: region:4279838-4279955:-1
so has part: feature:4279838-4279955:-1:exon

position:4279838:-1
position: 4279838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4279955:-1
position: 4279955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4279838-4279955:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4280356..4280531)
location: region:4280356-4280531:-1
so has part: feature:4280356-4280531:-1:exon

position:4280356:-1
position: 4280356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4280531:-1
position: 4280531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4280356-4280531:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4280778..4280895)
location: region:4280778-4280895:-1
so has part: feature:4280778-4280895:-1:exon

position:4280778:-1
position: 4280778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4280895:-1
position: 4280895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4280778-4280895:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4281188..4281385)
location: region:4281188-4281385:-1
so has part: feature:4281188-4281385:-1:exon

position:4281188:-1
position: 4281188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4281385:-1
position: 4281385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4281188-4281385:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4281649..4281802)
location: region:4281649-4281802:-1
so has part: feature:4281649-4281802:-1:exon

position:4281649:-1
position: 4281649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4281802:-1
position: 4281802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4281649-4281802:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4282366..4282589)
location: region:4282366-4282589:-1
so has part: feature:4282366-4282589:-1:exon

position:4282366:-1
position: 4282366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4282589:-1
position: 4282589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4282366-4282589:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4283057..4283153)
location: region:4283057-4283153:-1
so has part: feature:4283057-4283153:-1:exon

position:4283057:-1
position: 4283057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4283153:-1
position: 4283153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4283057-4283153:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4283925..4284095)
location: region:4283925-4284095:-1
so has part: feature:4283925-4284095:-1:exon

position:4283925:-1
position: 4283925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4284095:-1
position: 4284095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4283925-4284095:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4284798..4284875)
location: region:4284798-4284875:-1
so has part: feature:4284798-4284875:-1:exon

position:4284798:-1
position: 4284798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4284875:-1
position: 4284875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4284798-4284875:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4285548..4285691)
location: region:4285548-4285691:-1
so has part: feature:4285548-4285691:-1:exon

position:4285548:-1
position: 4285548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4285691:-1
position: 4285691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4285548-4285691:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4286048..4286172)
location: region:4286048-4286172:-1
so has part: feature:4286048-4286172:-1:exon

position:4286048:-1
position: 4286048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4286172:-1
position: 4286172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4286048-4286172:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4286423..4286512)
location: region:4286423-4286512:-1
so has part: feature:4286423-4286512:-1:exon

position:4286423:-1
position: 4286423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4286512:-1
position: 4286512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4286423-4286512:-1:exon

LOC117962994
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117962994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117962994
subclass of: SO_0000673
so part of: LOC117962994
location: complement(4287074..4287214)
location: region:4287074-4287214:-1
so has part: feature:4287074-4287214:-1:exon

position:4287074:-1
position: 4287074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4287074-4287214:-1:exon

LOC117404790
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4319558..>4328718)
location: region:4319558-4328718:-1
so has part: feature:4319558-4328718:-1:exon
subclass of: SO_0000010

117404790
type: Gene
SIO_000068: ncbigene

position:4319558:-1
position: 4319558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4328718:-1
position: 4328718
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4319558-4328718:-1:exon

LOC117404790
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404790
product: zona pellucida sperm-binding protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034910949.1
SIO_010081: LOC117404790
subclass of: SO_0000673
so part of: LOC117404790
location: complement(join(4319558..4319690,4320573..4320671,4321114..4321201,4321375..4321513,4321601..4321784,4321987..4322034,4322412..4322551,4322717..4322814,4323046..4323215,4323815..4323932,4324332..4324507,4324766..4324883,4325182..4325390,4325551..4325704,4326278..4326501,4326995..4327091,4327790..4327960,4328650..>4328718))
location: region:4319558-4328718:-1
so has part: feature:4328650-4328718:-1:exon
so has part: feature:4327790-4327960:-1:exon
so has part: feature:4326995-4327091:-1:exon
so has part: feature:4326278-4326501:-1:exon
so has part: feature:4325551-4325704:-1:exon
so has part: feature:4325182-4325390:-1:exon
so has part: feature:4324766-4324883:-1:exon
so has part: feature:4324332-4324507:-1:exon
so has part: feature:4323815-4323932:-1:exon
so has part: feature:4323046-4323215:-1:exon
so has part: feature:4322717-4322814:-1:exon
so has part: feature:4322412-4322551:-1:exon
so has part: feature:4321987-4322034:-1:exon
so has part: feature:4321601-4321784:-1:exon
so has part: feature:4321375-4321513:-1:exon
so has part: feature:4321114-4321201:-1:exon
so has part: feature:4320573-4320671:-1:exon
so has part: feature:4319558-4319690:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4328650-4328718:-1:exon

position:4328650:-1
position: 4328650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4327790-4327960:-1:exon

position:4327790:-1
position: 4327790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4327960:-1
position: 4327960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4326995-4327091:-1:exon

position:4326995:-1
position: 4326995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4327091:-1
position: 4327091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4326278-4326501:-1:exon

position:4326278:-1
position: 4326278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4326501:-1
position: 4326501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4325551-4325704:-1:exon

position:4325551:-1
position: 4325551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4325704:-1
position: 4325704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4325182-4325390:-1:exon

position:4325182:-1
position: 4325182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4325390:-1
position: 4325390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4324766-4324883:-1:exon

position:4324766:-1
position: 4324766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4324883:-1
position: 4324883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4324332-4324507:-1:exon

position:4324332:-1
position: 4324332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4324507:-1
position: 4324507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4323815-4323932:-1:exon

position:4323815:-1
position: 4323815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4323932:-1
position: 4323932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4323046-4323215:-1:exon

position:4323046:-1
position: 4323046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4323215:-1
position: 4323215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4322717-4322814:-1:exon

position:4322717:-1
position: 4322717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4322814:-1
position: 4322814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4322412-4322551:-1:exon

position:4322412:-1
position: 4322412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4322551:-1
position: 4322551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4321987-4322034:-1:exon

position:4321987:-1
position: 4321987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4322034:-1
position: 4322034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4321601-4321784:-1:exon

position:4321601:-1
position: 4321601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4321784:-1
position: 4321784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4321375-4321513:-1:exon

position:4321375:-1
position: 4321375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4321513:-1
position: 4321513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4321114-4321201:-1:exon

position:4321114:-1
position: 4321114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4321201:-1
position: 4321201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4320573-4320671:-1:exon

position:4320573:-1
position: 4320573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4320671:-1
position: 4320671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4319558-4319690:-1:exon

position:4319690:-1
position: 4319690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117404790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zona pellucida sperm-binding protein 2-like
translation: RKNVPVIAQEGLEKEDWEAALSIAQGAVMSEWQVVFHQTGMPPKTMTAEDARTAGYLVNSTSSRIIFRSPYGMPMSEVLLVSGIPVEAIRATVFYKQRWMLLLVDTSAACAKNPSVFDGTYLSWVTPRLITPLVLHPTKFLDKRITMGVEGRGLDEVAATSRGYQLLVNSTAVEIRVPFGAVGGYRKSHVIDNKYNQVYEIDLFLEHQWADDLWEVTQHRSFKPARSPYLPETPYVVNNTVPSEKGFTVTLGNFKPDVELKNLTLNGVPLTLPEAQNRGVKINEVQHPNGTKDFVLKVPFDNPLVSVEYIGALIRRYTLNINYTLNIVPQNESYFHPAAIVCDVKDVNLPDVKGFCTNRSVVFEVTPGNMDSSWELCIGSRPLPYTIAEPKITIELPLFSIGYIYEDISLRGLTVRVELNMRNIKTLQVEKQFVQRCPIPTRELLVCFPNGVVTVVAVTMEPIPLVDPSKTTLLDKTCKPKEFDSTRALFTFGVNTCGTRSQIVGNYLIYENEVLYTRALFPPNAPVITRDSEYRLTIRCRYPLNDTLTLAAERKAVPAPAPYSVRGLGSLHVRSYDPMSRAKSPRDVLNLKARLARDVSYSQFYSAFPVSQSLLEPVFLQVELQQPHSQTDRLILQDCWATLTPELDSSPQWDLVTDRCLVTGDSYRTHFHPVPASTLTRSSPQLQRLEVQAQQSSKDSAFWRQVYFHCMAVVCDPNLEDTCNKTCVPGAQRSARSVDRYSQIRGYVSAGPVQLVPEGQVLDLQTAGDSPLVLALGVASALLGVLLVILVAVGFRRC
SIO_010081: LOC117404790
subclass of: SO_0000673
so part of: LOC117404790
location: complement(join(4319596..4319690,4320573..4320671,4321114..4321201,4321375..4321513,4321601..4321784,4321987..4322034,4322412..4322551,4322717..4322814,4323046..4323215,4323815..4323932,4324332..4324507,4324766..4324883,4325182..4325390,4325551..4325704,4326278..4326501,4326995..4327091,4327790..4327960,4328650..>4328718))
location: region:4319596-4328718:-1
so has part: feature:4328650-4328718:-1:exon
so has part: feature:4327790-4327960:-1:exon
so has part: feature:4326995-4327091:-1:exon
so has part: feature:4326278-4326501:-1:exon
so has part: feature:4325551-4325704:-1:exon
so has part: feature:4325182-4325390:-1:exon
so has part: feature:4324766-4324883:-1:exon
so has part: feature:4324332-4324507:-1:exon
so has part: feature:4323815-4323932:-1:exon
so has part: feature:4323046-4323215:-1:exon
so has part: feature:4322717-4322814:-1:exon
so has part: feature:4322412-4322551:-1:exon
so has part: feature:4321987-4322034:-1:exon
so has part: feature:4321601-4321784:-1:exon
so has part: feature:4321375-4321513:-1:exon
so has part: feature:4321114-4321201:-1:exon
so has part: feature:4320573-4320671:-1:exon
so has part: feature:4319596-4319690:-1:exon

XP_034766840.1
type: Protein
SIO_000068: ncbiprotein

position:4319596:-1
position: 4319596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4328650-4328718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4327790-4327960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4326995-4327091:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4326278-4326501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4325551-4325704:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4325182-4325390:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4324766-4324883:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4324332-4324507:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4323815-4323932:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4323046-4323215:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4322717-4322814:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4322412-4322551:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4321987-4322034:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4321601-4321784:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4321375-4321513:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4321114-4321201:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4320573-4320671:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4319596-4319690:-1:exon

LOC117407820
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117407820
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4363139..4434163)
location: region:4363139-4434163:-1
so has part: feature:4363139-4434163:-1:exon
subclass of: SO_0000010

117407820
type: Gene
SIO_000068: ncbigene

position:4363139:-1
position: 4363139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4434163:-1
position: 4434163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4363139-4434163:-1:exon

LOC117407820
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117407820
product: leukocyte immunoglobulin-like receptor subfamily A member 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911005.1
SIO_010081: LOC117407820
subclass of: SO_0000673
so part of: LOC117407820
location: complement(join(4363139..4363427,4364215..4364316,4365090..4365221,4378547..4378840,4380322..4380375,4391002..4391295,4396584..4396877,4409006..4409088,4433976..4434163))
location: region:4363139-4434163:-1
so has part: feature:4433976-4434163:-1:exon
so has part: feature:4409006-4409088:-1:exon
so has part: feature:4396584-4396877:-1:exon
so has part: feature:4391002-4391295:-1:exon
so has part: feature:4380322-4380375:-1:exon
so has part: feature:4378547-4378840:-1:exon
so has part: feature:4365090-4365221:-1:exon
so has part: feature:4364215-4364316:-1:exon
so has part: feature:4363139-4363427:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4433976-4434163:-1:exon

position:4433976:-1
position: 4433976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4409006-4409088:-1:exon

position:4409006:-1
position: 4409006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4409088:-1
position: 4409088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4396584-4396877:-1:exon

position:4396584:-1
position: 4396584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4396877:-1
position: 4396877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4391002-4391295:-1:exon

position:4391002:-1
position: 4391002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4391295:-1
position: 4391295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4380322-4380375:-1:exon

position:4380322:-1
position: 4380322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4380375:-1
position: 4380375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4378547-4378840:-1:exon

position:4378547:-1
position: 4378547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4378840:-1
position: 4378840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4365090-4365221:-1:exon

position:4365090:-1
position: 4365090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4365221:-1
position: 4365221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4364215-4364316:-1:exon

position:4364215:-1
position: 4364215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4364316:-1
position: 4364316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4363139-4363427:-1:exon

position:4363427:-1
position: 4363427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117407820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117407820
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukocyte immunoglobulin-like receptor subfamily A member 6
translation: MARGSPPELASRGSAAAAAASQGSPHISFAAGNWVARDLRRELPATKKGGNVRKPAPTAAVSRRPRPNPTPPASSDQTAVGEKTKTCPDCERPQAVLTREPAWTQIYESERVTLRCQVQGGYTDWRFTWYKAERNAPVTQDYYSSIYGDRYTISSATRDHSGEYTCKGERRGNPSYSKTSHALTLRVSERPQAVLTREPAWTQIYESERVTLRCQVQGGYTDWRFTWYKAGRNAPVTQDYYSSIYGDRYTISSATRDHSGEYTCKGERRGNPSYSKTSHALTLRVSGTYSTASSARLWTPTPPIERPQAVLTQEPAWTQIYESERVTLRCQVQGGYTDWKFTWYKAGRNAPVTQDYYSSIYGDRYTISSATRGHSGEYTCKGERRGNPSYSKTSHALTLRVSARVSTSTLTVTTIIHEGSPRSNPTPPVSSDQTAVGEKTKTCPDCALGSWLWILQTVYITVLILLFSAVQIYTRTCRNTGSADLDYENTRPSHPAAETLLC
SIO_010081: LOC117407820
subclass of: SO_0000673
so part of: LOC117407820
location: complement(join(4363360..4363427,4364215..4364316,4365090..4365221,4378547..4378840,4380322..4380375,4391002..4391295,4396584..4396877,4409006..4409088,4433976..4434163))
location: region:4363360-4434163:-1
so has part: feature:4433976-4434163:-1:exon
so has part: feature:4409006-4409088:-1:exon
so has part: feature:4396584-4396877:-1:exon
so has part: feature:4391002-4391295:-1:exon
so has part: feature:4380322-4380375:-1:exon
so has part: feature:4378547-4378840:-1:exon
so has part: feature:4365090-4365221:-1:exon
so has part: feature:4364215-4364316:-1:exon
so has part: feature:4363360-4363427:-1:exon

XP_034766896.1
type: Protein
SIO_000068: ncbiprotein

position:4363360:-1
position: 4363360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4433976-4434163:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4409006-4409088:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4396584-4396877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4391002-4391295:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4380322-4380375:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4378547-4378840:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4365090-4365221:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4364215-4364316:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4363360-4363427:-1:exon

LOC117407804
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117407804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4503562..4508078)
location: region:4503562-4508078:-1
so has part: feature:4503562-4508078:-1:exon

117407804
type: Gene
SIO_000068: ncbigene

position:4503562:-1
position: 4503562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4508078:-1
position: 4508078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4503562-4508078:-1:exon

LOC117407804
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407804
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117407804
subclass of: SO_0000673
so part of: LOC117407804
location: complement(4503562..4504367)
location: region:4503562-4504367:-1
so has part: feature:4503562-4504367:-1:exon

position:4504367:-1
position: 4504367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4503562-4504367:-1:exon

LOC117407804
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407804
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117407804
subclass of: SO_0000673
so part of: LOC117407804
location: complement(4504835..4504985)
location: region:4504835-4504985:-1
so has part: feature:4504835-4504985:-1:exon

position:4504835:-1
position: 4504835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4504985:-1
position: 4504985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4504835-4504985:-1:exon

LOC117407804
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407804
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117407804
subclass of: SO_0000673
so part of: LOC117407804
location: complement(4505257..4505490)
location: region:4505257-4505490:-1
so has part: feature:4505257-4505490:-1:exon

position:4505257:-1
position: 4505257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4505490:-1
position: 4505490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4505257-4505490:-1:exon

LOC117407804
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407804
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117407804
subclass of: SO_0000673
so part of: LOC117407804
location: complement(4506196..4506291)
location: region:4506196-4506291:-1
so has part: feature:4506196-4506291:-1:exon

position:4506196:-1
position: 4506196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4506291:-1
position: 4506291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4506196-4506291:-1:exon

LOC117407804
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407804
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117407804
subclass of: SO_0000673
so part of: LOC117407804
location: complement(4506717..4507056)
location: region:4506717-4507056:-1
so has part: feature:4506717-4507056:-1:exon

position:4506717:-1
position: 4506717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4507056:-1
position: 4507056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4506717-4507056:-1:exon

LOC117407804
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407804
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117407804
subclass of: SO_0000673
so part of: LOC117407804
location: complement(4507714..4508078)
location: region:4507714-4508078:-1
so has part: feature:4507714-4508078:-1:exon

position:4507714:-1
position: 4507714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4507714-4508078:-1:exon

LOC117404809
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404809
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4523953..4533006
location: region:4523953-4533006:1
so has part: feature:4523953-4533006:1:exon
subclass of: SO_0000010

117404809
type: Gene
SIO_000068: ncbigene

position:4523953:1
position: 4523953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4533006:1
position: 4533006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4523953-4533006:1:exon

LOC117404809
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404809
product: uncharacterized LOC117404809
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034910955.1
SIO_010081: LOC117404809
subclass of: SO_0000673
so part of: LOC117404809
location: join(4523953..4524483,4524747..4524802,4525365..4525454,4525706..4525830,4526185..4526328,4527006..4527083,4527789..4527959,4528659..4528755,4529251..4529474,4530060..4530213,4530374..4530582,4530887..4531004,4531285..4531372,4531792..4531890,4532874..4533006)
location: region:4523953-4533006:1
so has part: feature:4523953-4524483:1:exon
so has part: feature:4524747-4524802:1:exon
so has part: feature:4525365-4525454:1:exon
so has part: feature:4525706-4525830:1:exon
so has part: feature:4526185-4526328:1:exon
so has part: feature:4527006-4527083:1:exon
so has part: feature:4527789-4527959:1:exon
so has part: feature:4528659-4528755:1:exon
so has part: feature:4529251-4529474:1:exon
so has part: feature:4530060-4530213:1:exon
so has part: feature:4530374-4530582:1:exon
so has part: feature:4530887-4531004:1:exon
so has part: feature:4531285-4531372:1:exon
so has part: feature:4531792-4531890:1:exon
so has part: feature:4532874-4533006:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4523953-4524483:1:exon

position:4524483:1
position: 4524483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4524747-4524802:1:exon

position:4524747:1
position: 4524747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4524802:1
position: 4524802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4525365-4525454:1:exon

position:4525365:1
position: 4525365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4525454:1
position: 4525454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4525706-4525830:1:exon

position:4525706:1
position: 4525706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4525830:1
position: 4525830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4526185-4526328:1:exon

position:4526185:1
position: 4526185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4526328:1
position: 4526328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4527006-4527083:1:exon

position:4527006:1
position: 4527006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4527083:1
position: 4527083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4527789-4527959:1:exon

position:4527789:1
position: 4527789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4527959:1
position: 4527959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4528659-4528755:1:exon

position:4528659:1
position: 4528659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4528755:1
position: 4528755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4529251-4529474:1:exon

position:4529251:1
position: 4529251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4529474:1
position: 4529474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4530060-4530213:1:exon

position:4530060:1
position: 4530060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4530213:1
position: 4530213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4530374-4530582:1:exon

position:4530374:1
position: 4530374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4530582:1
position: 4530582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4530887-4531004:1:exon

position:4530887:1
position: 4530887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4531004:1
position: 4531004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4531285-4531372:1:exon

position:4531285:1
position: 4531285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4531372:1
position: 4531372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4531792-4531890:1:exon

position:4531792:1
position: 4531792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4531890:1
position: 4531890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4532874-4533006:1:exon

position:4532874:1
position: 4532874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117404809
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404809
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117404809
translation: MGFRLLLGVAWLCAVLPAGLVAQDLSGNFVTECRDRYFWMSTNGKFAGGNFRFDVIDRSGVYPLNDSYAAACGFTYSFNLPGDLIFRASFLACHVESVNDVSYALQYRFVRLDSLGRETVYPFSLSCSTESPWNPREIVCEDNYMEVSVRKNVPVIAQEGLEKEDWEAALSIAQGAVMSVWQVVFHQTGMPPKTMTAEDARTAGYLVNSTSSRIIFRSPYGMPMSEVLLVSGIPVEAIRATVFYKQRWMLLLVDTSAACAKNPSVFDGTYLSWVTPRLITPLVLHPTKFLDKRITMGVEGRGLDEVAATSRGYQLLVNSTAVEIRVPFGAVGGYRKSHVIDNKYNQVYEIDLFLEHQWADDLWEVTQHRSFKPARSPYLPETPYVVNNTVPSEKGFTVTLGNFKPDVELKNLTLNGVPLTLPEAQNRGVKISEVQHPNGTKDFVLKVPFDNPLVSVEYIGALIRRYTLNINYTLNIVPQNEPYFHPAAIVCDVKDVGVFPLHGCGL
SIO_010081: LOC117404809
subclass of: SO_0000673
so part of: LOC117404809
location: join(4524461..4524483,4524747..4524802,4525365..4525454,4525706..4525830,4526185..4526328,4527006..4527083,4527789..4527959,4528659..4528755,4529251..4529474,4530060..4530213,4530374..4530582,4530887..4531004,4531285..4531316)
location: region:4524461-4531316:1
so has part: feature:4524461-4524483:1:exon
so has part: feature:4524747-4524802:1:exon
so has part: feature:4525365-4525454:1:exon
so has part: feature:4525706-4525830:1:exon
so has part: feature:4526185-4526328:1:exon
so has part: feature:4527006-4527083:1:exon
so has part: feature:4527789-4527959:1:exon
so has part: feature:4528659-4528755:1:exon
so has part: feature:4529251-4529474:1:exon
so has part: feature:4530060-4530213:1:exon
so has part: feature:4530374-4530582:1:exon
so has part: feature:4530887-4531004:1:exon
so has part: feature:4531285-4531316:1:exon

XP_034766846.1
type: Protein
SIO_000068: ncbiprotein

position:4524461:1
position: 4524461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4531316:1
position: 4531316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4524461-4524483:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4524747-4524802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4525365-4525454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4525706-4525830:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4526185-4526328:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4527006-4527083:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4527789-4527959:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4528659-4528755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4529251-4529474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4530060-4530213:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4530374-4530582:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4530887-4531004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4531285-4531316:1:exon

LOC117404709
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4539005..4549468)
location: region:4539005-4549468:-1
so has part: feature:4539005-4549468:-1:exon
subclass of: SO_0000010

117404709
type: Gene
SIO_000068: ncbigene

position:4539005:-1
position: 4539005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4549468:-1
position: 4549468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4539005-4549468:-1:exon

LOC117404709
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404709
product: transcobalamin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911006.1
SIO_010081: LOC117404709
subclass of: SO_0000673
so part of: LOC117404709
location: complement(join(4539005..4539141,4539928..4540046,4541930..4542119,4544398..4544569,4545141..4545322,4545555..4545710,4547237..4547401,4547940..4548140,4549238..4549468))
location: region:4539005-4549468:-1
so has part: feature:4549238-4549468:-1:exon
so has part: feature:4547940-4548140:-1:exon
so has part: feature:4547237-4547401:-1:exon
so has part: feature:4545555-4545710:-1:exon
so has part: feature:4545141-4545322:-1:exon
so has part: feature:4544398-4544569:-1:exon
so has part: feature:4541930-4542119:-1:exon
so has part: feature:4539928-4540046:-1:exon
so has part: feature:4539005-4539141:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4549238-4549468:-1:exon

position:4549238:-1
position: 4549238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4547940-4548140:-1:exon

position:4547940:-1
position: 4547940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4548140:-1
position: 4548140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4547237-4547401:-1:exon

position:4547237:-1
position: 4547237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4547401:-1
position: 4547401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4545555-4545710:-1:exon

position:4545555:-1
position: 4545555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4545710:-1
position: 4545710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4545141-4545322:-1:exon

position:4545141:-1
position: 4545141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4545322:-1
position: 4545322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4544398-4544569:-1:exon

position:4544398:-1
position: 4544398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4544569:-1
position: 4544569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4541930-4542119:-1:exon

position:4541930:-1
position: 4541930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4542119:-1
position: 4542119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4539928-4540046:-1:exon

position:4539928:-1
position: 4539928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4540046:-1
position: 4540046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4539005-4539141:-1:exon

position:4539141:-1
position: 4539141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117404709
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcobalamin-1-like
translation: MAVGCVRGALAVLLQLSVWLPVALQCSVSEIQTGQVIRLLNIMVQSENSSSASGSTPNPSILLALRLASHHDSDTERGMLGRLQVDAVKRVQEGLPFSSGTVALYCLAMQASCADPSLTPAPGLKGGKKAMDLRKLLEKKLKEEIDNIDSKNFPLTNYYQVSLDIMALCMMGKPVTSHSVQRLIEASDNGGFSYGEKYSVDTASVAVLALTCVKRSIKAPDRMVLRLKILNALKCLIKNILQETTSEGLIGNVYSTGLAMQALSVTSTNYDCSRTIQTLLERAGSGSFENPMAASQITPSLENRNYLELNKLHCKDFEKTLDGSVLPLAPPTAPEGVITVHYRVEDGIHYSFNDSIEVTVPVGSSLLQVMEEAAKISPAKFRFTVEQSSWGPFVTSIQVLAGNTEERTYWQFLTGSNALDQGVGDYKPYDREYIVAKFSTY
SIO_010081: LOC117404709
subclass of: SO_0000673
so part of: LOC117404709
location: complement(join(4539080..4539141,4539928..4540046,4541930..4542119,4544398..4544569,4545141..4545322,4545555..4545710,4547237..4547401,4547940..4548140,4549238..4549316))
location: region:4539080-4549316:-1
so has part: feature:4549238-4549316:-1:exon
so has part: feature:4547940-4548140:-1:exon
so has part: feature:4547237-4547401:-1:exon
so has part: feature:4545555-4545710:-1:exon
so has part: feature:4545141-4545322:-1:exon
so has part: feature:4544398-4544569:-1:exon
so has part: feature:4541930-4542119:-1:exon
so has part: feature:4539928-4540046:-1:exon
so has part: feature:4539080-4539141:-1:exon

XP_034766897.1
type: Protein
SIO_000068: ncbiprotein

position:4539080:-1
position: 4539080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4549316:-1
position: 4549316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4549238-4549316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4547940-4548140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4547237-4547401:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4545555-4545710:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4545141-4545322:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4544398-4544569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4541930-4542119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4539928-4540046:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4539080-4539141:-1:exon

LOC117404819
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4563599..4573541)
location: region:4563599-4573541:-1
so has part: feature:4563599-4573541:-1:exon
subclass of: SO_0000010

117404819
type: Gene
SIO_000068: ncbigene

position:4563599:-1
position: 4563599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4573541:-1
position: 4573541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4563599-4573541:-1:exon

LOC117404819
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404819
product: E3 ubiquitin-protein ligase TRIM39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034910952.1
SIO_010081: LOC117404819
subclass of: SO_0000673
so part of: LOC117404819
location: complement(join(4563599..4564403,4564892..4565042,4565294..4565527,4566224..4566319,4566736..4567075,4567732..4567996,4573519..4573541))
location: region:4563599-4573541:-1
so has part: feature:4573519-4573541:-1:exon
so has part: feature:4567732-4567996:-1:exon
so has part: feature:4566736-4567075:-1:exon
so has part: feature:4566224-4566319:-1:exon
so has part: feature:4565294-4565527:-1:exon
so has part: feature:4564892-4565042:-1:exon
so has part: feature:4563599-4564403:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4573519-4573541:-1:exon

position:4573519:-1
position: 4573519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4567732-4567996:-1:exon

position:4567732:-1
position: 4567732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4567996:-1
position: 4567996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4566736-4567075:-1:exon

position:4566736:-1
position: 4566736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4567075:-1
position: 4567075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4566224-4566319:-1:exon

position:4566224:-1
position: 4566224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4566319:-1
position: 4566319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4565294-4565527:-1:exon

position:4565294:-1
position: 4565294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4565527:-1
position: 4565527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4564892-4565042:-1:exon

position:4564892:-1
position: 4564892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4565042:-1
position: 4565042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4563599-4564403:-1:exon

position:4564403:-1
position: 4564403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117404819
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: MATAASPKEKFSCSVCLDLFTEPATIPCGHSFCLDCIGSYWDQIDQTGVYSCPQCRETFTPRPVLRKNNIINELVEELKKTRRLDSKRESPAPVPVSAEPGDVPCDFCPSEIKRGAVRSCLTCRGSYCEAHLQPHYETAGLKRHALVPPLRDFEQKLCKQHQRWLELYCRTDQSCICALCIDSDHSDHSIVSSAKGRVEKKKELGERQVEIENLIEERLKGLERLNQAVESLKLSAHKERAESEQVLSELIRSIERIRTEVGELIGAKEKAAVSRANEQREQLEQEIQELRKKKAEMEQLSETEDHIHFLQSFQSVCTPPAAQQLFDNIDDSFWTLREAVSRLKDHLEGFWKVELMKATIAVDVTLDRDTAHSYLILSEDGKQVRCGDKPQPLPDNPKRFDKKSYVLGREGFTSGRHYWEVEVGEKLRWVLGVTRESSQRKGGITEKPQQGFWVIWWNEENNLFSAVRAPRTPLPLSPKPRKLGVYLDYEGGHLSFYNVDTRSHIYTFTDTFTEKLYPLFSPGLYSSGKNAAPLIICPHTYTD
SIO_010081: LOC117404819
subclass of: SO_0000673
so part of: LOC117404819
location: complement(join(4563856..4564403,4564892..4565042,4565294..4565527,4566224..4566319,4566736..4567075,4567732..4567994))
location: region:4563856-4567994:-1
so has part: feature:4567732-4567994:-1:exon
so has part: feature:4566736-4567075:-1:exon
so has part: feature:4566224-4566319:-1:exon
so has part: feature:4565294-4565527:-1:exon
so has part: feature:4564892-4565042:-1:exon
so has part: feature:4563856-4564403:-1:exon

XP_034766843.1
type: Protein
SIO_000068: ncbiprotein

position:4563856:-1
position: 4563856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4567994:-1
position: 4567994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4567732-4567994:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4566736-4567075:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4566224-4566319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4565294-4565527:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4564892-4565042:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4563856-4564403:-1:exon

LOC117965878
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4588576..4589454)
location: region:4588576-4589454:-1
so has part: feature:4588576-4589454:-1:exon

117965878
type: Gene
SIO_000068: ncbigene

position:4588576:-1
position: 4588576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4589454:-1
position: 4589454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4588576-4589454:-1:exon

LOC117965878
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117965878
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 20% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117965878
subclass of: SO_0000673
so part of: LOC117965878
location: complement(4588576..4589454)
location: region:4588576-4589454:-1
so has part: feature:4588576-4589454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4588576-4589454:-1:exon

LOC117407807
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117407807
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4607821..4629395)
location: region:4607821-4629395:-1
so has part: feature:4607821-4629395:-1:exon
subclass of: SO_0000010

117407807
type: Gene
SIO_000068: ncbigene

position:4607821:-1
position: 4607821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4629395:-1
position: 4629395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4607821-4629395:-1:exon

LOC117407807
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117407807
product: butyrophilin subfamily 1 member A1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034910967.1
SIO_010081: LOC117407807
subclass of: SO_0000673
so part of: LOC117407807
location: complement(join(4607821..4608499,4620297..4620323,4620414..4620440,4622056..4622107,4624176..4624313,4625588..4625803,4629291..4629395))
location: region:4607821-4629395:-1
so has part: feature:4629291-4629395:-1:exon
so has part: feature:4625588-4625803:-1:exon
so has part: feature:4624176-4624313:-1:exon
so has part: feature:4622056-4622107:-1:exon
so has part: feature:4620414-4620440:-1:exon
so has part: feature:4620297-4620323:-1:exon
so has part: feature:4607821-4608499:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4629291-4629395:-1:exon

position:4629291:-1
position: 4629291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4625588-4625803:-1:exon

position:4625588:-1
position: 4625588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4625803:-1
position: 4625803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4624176-4624313:-1:exon

position:4624176:-1
position: 4624176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4624313:-1
position: 4624313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4622056-4622107:-1:exon

position:4622056:-1
position: 4622056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4622107:-1
position: 4622107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4620414-4620440:-1:exon

position:4620414:-1
position: 4620414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4620440:-1
position: 4620440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4620297-4620323:-1:exon

position:4620297:-1
position: 4620297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4620323:-1
position: 4620323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4607821-4608499:-1:exon

position:4608499:-1
position: 4608499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117407807
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117407807
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like
translation: MKWAGDLDKLVQTPKQSQSAGQVEQRKGAELRNKEDLPGPEGEELSEGAGQNQGEELNQEEEQRLKDGHDIIMRWARELKTVPENSVSAGEAVEQGLAELVKEWKRGKLSNILPIMEFIMWALIKEEADKGIGTRMWFSRMLKSLNIGAGRCIPDSVWQWIHKASVDVTLDPDTAHPELILSAEGKRVRWGGTRQRLPDNPERFNNTFCVLGRESFTSGRRYWQVQVGWNTLWRLGVSRESAERKGVISMTPQQGYWTVWWSDYRDGYRDELIAVTDPETPLPRSLKPQKLGVYLDYEEGQLSFYNVETRSHIYTFTDMEFNPNEKLYPFFCTWDSNTALVLEDPDPVSAAD
SIO_010081: LOC117407807
subclass of: SO_0000673
so part of: LOC117407807
location: complement(join(4607937..4608499,4620297..4620323,4620414..4620440,4622056..4622107,4624176..4624313,4625588..4625803,4629291..4629326))
location: region:4607937-4629326:-1
so has part: feature:4629291-4629326:-1:exon
so has part: feature:4625588-4625803:-1:exon
so has part: feature:4624176-4624313:-1:exon
so has part: feature:4622056-4622107:-1:exon
so has part: feature:4620414-4620440:-1:exon
so has part: feature:4620297-4620323:-1:exon
so has part: feature:4607937-4608499:-1:exon

XP_034766858.1
type: Protein
SIO_000068: ncbiprotein

position:4607937:-1
position: 4607937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4629326:-1
position: 4629326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4629291-4629326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4625588-4625803:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4624176-4624313:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4622056-4622107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4620414-4620440:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4620297-4620323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4607937-4608499:-1:exon

LOC117965832
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965832
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4640139..>4642233
location: region:4640139-4642233:1
so has part: feature:4640139-4642233:1:exon
subclass of: SO_0000010

117965832
type: Gene
SIO_000068: ncbigene

position:4640139:1
position: 4640139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4642233:1
position: 4642233
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4640139-4642233:1:exon

LOC117965832
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965832
product: E3 ubiquitin-protein ligase TRIM47-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034910982.1
SIO_010081: LOC117965832
subclass of: SO_0000673
so part of: LOC117965832
location: join(4640139..4640732,4641883..4641978,4642144..>4642233)
location: region:4640139-4642233:1
so has part: feature:4640139-4640732:1:exon
so has part: feature:4641883-4641978:1:exon
so has part: feature:4642144-4642233:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4640139-4640732:1:exon

position:4640732:1
position: 4640732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4641883-4641978:1:exon

position:4641883:1
position: 4641883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4641978:1
position: 4641978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4642144-4642233:1:exon

position:4642144:1
position: 4642144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965832
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965832
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM47-like
translation: MASKVWSEDRFSCPVCLDLLKDPVAIPCGHSYCMGCIKNCWDQTDHTGVYSCPQCRETFTPRTVLRRNNMLAELVEELKKIGLNPSPAQSFAGPGDVMCDFCTGRKFKAVKSCLTCLASYCETHVKSHSEVAAFKRHKLINAIGNLEQKLCAEHQKVLEGFCRTDQTCICWLCTDKEHKSHDTVSAEAERTVKQKQLGETHTEIQQRIQERLKEIEELKQTLESLKRFACIEIKESEKIFTELIRSIEKIHTEVIE
SIO_010081: LOC117965832
subclass of: SO_0000673
so part of: LOC117965832
location: join(4640151..4640732,4641883..4641978,4642144..>4642233)
location: region:4640151-4642233:1
so has part: feature:4640151-4640732:1:exon
so has part: feature:4641883-4641978:1:exon
so has part: feature:4642144-4642233:1:exon

XP_034766873.1
type: Protein
SIO_000068: ncbiprotein

position:4640151:1
position: 4640151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4640151-4640732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4641883-4641978:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4642144-4642233:1:exon

LOC117962847
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117962847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4661719..4669859)
location: region:4661719-4669859:-1
so has part: feature:4661719-4669859:-1:exon
subclass of: SO_0000010

117962847
type: Gene
SIO_000068: ncbigene

position:4661719:-1
position: 4661719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4669859:-1
position: 4669859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4661719-4669859:-1:exon

LOC117962847
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117962847
product: uncharacterized LOC117962847
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034910976.1
SIO_010081: LOC117962847
subclass of: SO_0000673
so part of: LOC117962847
location: complement(join(4661719..4661851,4662804..4662903,4663318..4663405,4663686..4663803,4664113..4664321,4665922..4666018,4666684..4666854,4668276..4668419,4668781..4668905,4669163..4669252,4669815..4669859))
location: region:4661719-4669859:-1
so has part: feature:4669815-4669859:-1:exon
so has part: feature:4669163-4669252:-1:exon
so has part: feature:4668781-4668905:-1:exon
so has part: feature:4668276-4668419:-1:exon
so has part: feature:4666684-4666854:-1:exon
so has part: feature:4665922-4666018:-1:exon
so has part: feature:4664113-4664321:-1:exon
so has part: feature:4663686-4663803:-1:exon
so has part: feature:4663318-4663405:-1:exon
so has part: feature:4662804-4662903:-1:exon
so has part: feature:4661719-4661851:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4669815-4669859:-1:exon

position:4669815:-1
position: 4669815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4669163-4669252:-1:exon

position:4669163:-1
position: 4669163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4669252:-1
position: 4669252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4668781-4668905:-1:exon

position:4668781:-1
position: 4668781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4668905:-1
position: 4668905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4668276-4668419:-1:exon

position:4668276:-1
position: 4668276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4668419:-1
position: 4668419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4666684-4666854:-1:exon

position:4666684:-1
position: 4666684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4666854:-1
position: 4666854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4665922-4666018:-1:exon

position:4665922:-1
position: 4665922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4666018:-1
position: 4666018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4664113-4664321:-1:exon

position:4664113:-1
position: 4664113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4664321:-1
position: 4664321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4663686-4663803:-1:exon

position:4663686:-1
position: 4663686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4663803:-1
position: 4663803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4663318-4663405:-1:exon

position:4663318:-1
position: 4663318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4663405:-1
position: 4663405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4662804-4662903:-1:exon

position:4662804:-1
position: 4662804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4662903:-1
position: 4662903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4661719-4661851:-1:exon

position:4661851:-1
position: 4661851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117962847
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117962847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117962847
translation: MSTNGKFAGGNFRFDVIDRSGVYPLNDSYAAACGFTYSFNLPGDLIFRASFLACHVESVNDVSYALQYRFVRLDSLGRETVYPFSLSCSTESPWNPREIVCEDNYMEAQGAVMSVWQVVFHQTGMPPKTMTAEDARTAGYLVNSTSSRVIFRSPYGMPMSEVLLVSGIPVEAIRATVFYKQRWMLLLVDTSAACAKNTIPSEKGFTVTLGNFKPDVELKNLTLNGVPLTLPEAQNRGVKISEVQHPNGTKDFVLKVPFDNPLVSVEYIGALIRRYTLNINYTLNIVPQNEPYFHPAAIVCDVKDVGVFPLHGCGL
SIO_010081: LOC117962847
subclass of: SO_0000673
so part of: LOC117962847
location: complement(join(4663374..4663405,4663686..4663803,4664113..4664321,4665922..4666018,4666684..4666854,4668276..4668419,4668781..4668905,4669163..4669214))
location: region:4663374-4669214:-1
so has part: feature:4669163-4669214:-1:exon
so has part: feature:4668781-4668905:-1:exon
so has part: feature:4668276-4668419:-1:exon
so has part: feature:4666684-4666854:-1:exon
so has part: feature:4665922-4666018:-1:exon
so has part: feature:4664113-4664321:-1:exon
so has part: feature:4663686-4663803:-1:exon
so has part: feature:4663374-4663405:-1:exon

XP_034766867.1
type: Protein
SIO_000068: ncbiprotein

position:4663374:-1
position: 4663374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4669214:-1
position: 4669214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4669163-4669214:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4668781-4668905:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4668276-4668419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4666684-4666854:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4665922-4666018:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4664113-4664321:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4663686-4663803:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4663374-4663405:-1:exon

trnat-cgu
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnat-cgu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(4758002..4758073)
location: region:4758002-4758073:-1
so has part: feature:4758002-4758073:-1:exon
subclass of: SO_0000663

117404801
type: Gene
SIO_000068: ncbigene

position:4758002:-1
position: 4758002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4758073:-1
position: 4758073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4758002-4758073:-1:exon

trnat-cgu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnat-cgu
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon CGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(4758039..4758041),aa:Thr, seq:cgt)
SIO_010081: trnat-cgu
subclass of: SO_0000673
so part of: trnat-cgu
location: complement(4758002..4758073)
location: region:4758002-4758073:-1
so has part: feature:4758002-4758073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4758002-4758073:-1:exon

trnaq-cug
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnaq-cug
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(4759574..4759645)
location: region:4759574-4759645:-1
so has part: feature:4759574-4759645:-1:exon
subclass of: SO_0000663

117965942
type: Gene
SIO_000068: ncbigene

position:4759574:-1
position: 4759574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4759645:-1
position: 4759645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4759574-4759645:-1:exon

trnaq-cug
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnaq-cug
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamine (anticodon CUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(4759610..4759612),aa:Gln, seq:ctg)
SIO_010081: trnaq-cug
subclass of: SO_0000673
so part of: trnaq-cug
location: complement(4759574..4759645)
location: region:4759574-4759645:-1
so has part: feature:4759574-4759645:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4759574-4759645:-1:exon

trnat-cgu
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnat-cgu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(4760865..4760936)
location: region:4760865-4760936:-1
so has part: feature:4760865-4760936:-1:exon
subclass of: SO_0000663

117965943
type: Gene
SIO_000068: ncbigene

position:4760865:-1
position: 4760865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4760936:-1
position: 4760936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4760865-4760936:-1:exon

trnat-cgu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnat-cgu
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon CGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(4760902..4760904),aa:Thr, seq:cgt)
SIO_010081: trnat-cgu
subclass of: SO_0000673
so part of: trnat-cgu
location: complement(4760865..4760936)
location: region:4760865-4760936:-1
so has part: feature:4760865-4760936:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4760865-4760936:-1:exon

LOC117965888
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4762068..4785886)
location: region:4762068-4785886:-1
so has part: feature:4762068-4785886:-1:exon
subclass of: SO_0000010

117965888
type: Gene
SIO_000068: ncbigene

position:4762068:-1
position: 4762068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4785886:-1
position: 4785886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4762068-4785886:-1:exon

LOC117965888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965888
product: E3 ubiquitin-protein ligase TRIM39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911025.1
SIO_010081: LOC117965888
subclass of: SO_0000673
so part of: LOC117965888
location: complement(join(4762068..4762633,4775942..4775968,4776111..4776137,4785640..4785886))
location: region:4762068-4785886:-1
so has part: feature:4785640-4785886:-1:exon
so has part: feature:4776111-4776137:-1:exon
so has part: feature:4775942-4775968:-1:exon
so has part: feature:4762068-4762633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4785640-4785886:-1:exon

position:4785640:-1
position: 4785640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4776111-4776137:-1:exon

position:4776111:-1
position: 4776111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4776137:-1
position: 4776137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4775942-4775968:-1:exon

position:4775942:-1
position: 4775942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4775968:-1
position: 4775968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4762068-4762633:-1:exon

position:4762633:-1
position: 4762633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: MEVRWYRDRFDTPVHLYLNQRDQLSRQDSDYRGRTALSPSALETGDISLRLRYIRPSDRGVYTCFADDGSQYEEGQAKVIVAESVRRVLKSEWKWILSSAVDVTLDHDTAQPRLILSAEGKRVRLGETRQDLPDNPERFDHRLCVLGREGFTSGRRYWQVQVGENTAWILGVSRMSAPRKGWISMTPKRGYWTVEGWSGGEFTALTDPETPLPRSLKPQKLGVYLDYEEGQLSFYNVETRSHIYTFTDMEFNPNEKLYPFFCTGYKNTDLVLESPDPVSAAD
SIO_010081: LOC117965888
subclass of: SO_0000673
so part of: LOC117965888
location: complement(join(4762086..4762633,4775942..4775968,4776111..4776137,4785640..4785886))
location: region:4762086-4785886:-1
so has part: feature:4785640-4785886:-1:exon
so has part: feature:4776111-4776137:-1:exon
so has part: feature:4775942-4775968:-1:exon
so has part: feature:4762086-4762633:-1:exon

XP_034766916.1
type: Protein
SIO_000068: ncbiprotein

position:4762086:-1
position: 4762086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4785640-4785886:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4776111-4776137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4775942-4775968:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4762086-4762633:-1:exon

LOC117409877
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117409877
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4828085..5006749)
location: region:4828085-5006749:-1
so has part: feature:4828085-5006749:-1:exon

117409877
type: Gene
SIO_000068: ncbigene

position:4828085:-1
position: 4828085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5006749:-1
position: 5006749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4828085-5006749:-1:exon

LOC117409877
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117409877
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 129 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117409877
subclass of: SO_0000673
so part of: LOC117409877
location: complement(4828085..4829316)
location: region:4828085-4829316:-1
so has part: feature:4828085-4829316:-1:exon

position:4829316:-1
position: 4829316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4828085-4829316:-1:exon

LOC117409877
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117409877
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 129 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117409877
subclass of: SO_0000673
so part of: LOC117409877
location: complement(4850315..4851961)
location: region:4850315-4851961:-1
so has part: feature:4850315-4851961:-1:exon

position:4850315:-1
position: 4850315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4851961:-1
position: 4851961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4850315-4851961:-1:exon

LOC117962830
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117962830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4858688..4873379
location: region:4858688-4873379:1
so has part: feature:4858688-4873379:1:exon
subclass of: SO_0000010

117962830
type: Gene
SIO_000068: ncbigene

position:4858688:1
position: 4858688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4873379:1
position: 4873379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4858688-4873379:1:exon

LOC117962830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117962830
product: zinc finger protein 501-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911007.1
SIO_010081: LOC117962830
subclass of: SO_0000673
so part of: LOC117962830
location: join(4858688..4858718,4868622..4869773,4873261..4873379)
location: region:4858688-4873379:1
so has part: feature:4858688-4858718:1:exon
so has part: feature:4868622-4869773:1:exon
so has part: feature:4873261-4873379:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4858688-4858718:1:exon

position:4858718:1
position: 4858718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4868622-4869773:1:exon

position:4868622:1
position: 4868622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4869773:1
position: 4869773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4873261-4873379:1:exon

position:4873261:1
position: 4873261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117962830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117962830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 501-like
translation: MDVTVLDMTGKEETELEPVQIKEDETELELVHIKEEETELEPVHIKEVTELEPVHIKEEETELEPVHIKEEETELEPVQIKEDETELQPVHIEEKSIGCLFKDTEKISRPKISHQCNECGKSFSWPGNLKTHQRIHTGEKPYQCTECGESFSASGGLKRHHRFHTGEKPYRCFECGKSFTEKGTLNKHQRIHTGEKPYQCTECGKSFNVSGSLKRHHRFHTGEKPYHCFECGKSFTEKGTLNKHQRIHTGEKPYQCTECGKSFNVSGSLKRHHRFHTGEKPYCCFECGKSFTDKGKLKNHQRIHTGEKPYQCVKCGESFSRLGNLKRHQRIHTGEKPYQCTECGESFSESGSLNRHQRIHTEEKPYHCVKCGESFSQLGNLKRHQRIHTGASLPLCEFSCISSVLSWALNPLETQLRTSQTHDSGFVLDQITR
SIO_010081: LOC117962830
subclass of: SO_0000673
so part of: LOC117962830
location: join(4858688..4858718,4868622..4869773,4873261..4873379)
location: region:4858688-4873379:1
so has part: feature:4858688-4858718:1:exon
so has part: feature:4868622-4869773:1:exon
so has part: feature:4873261-4873379:1:exon

XP_034766898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4858688-4858718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4868622-4869773:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4873261-4873379:1:exon

LOC117404883
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4892240..4900557
location: region:4892240-4900557:1
so has part: feature:4892240-4900557:1:exon
subclass of: SO_0000011

117404883
type: Gene
SIO_000068: ncbigene

position:4892240:1
position: 4892240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4900557:1
position: 4900557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4892240-4900557:1:exon

LOC117404883
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117404883
product: uncharacterized LOC117404883
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004661562.1
SIO_010081: LOC117404883
subclass of: SO_0000673
so part of: LOC117404883
location: join(4892240..4892266,4894639..4894736,4900382..4900557)
location: region:4892240-4900557:1
so has part: feature:4892240-4892266:1:exon
so has part: feature:4894639-4894736:1:exon
so has part: feature:4900382-4900557:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4892240-4892266:1:exon

position:4892266:1
position: 4892266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4894639-4894736:1:exon

position:4894639:1
position: 4894639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4894736:1
position: 4894736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4900382-4900557:1:exon

position:4900382:1
position: 4900382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117962862
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117962862
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <4900831..>4901905
location: region:4900831-4901905:1
so has part: feature:4900831-4901905:1:exon
subclass of: SO_0000010

117962862
type: Gene
SIO_000068: ncbigene

position:4900831:1
position: 4900831
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:4901905:1
position: 4901905
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4900831-4901905:1:exon

LOC117962862
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117962862
product: zinc finger protein 501-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034910994.1
SIO_010081: LOC117962862
subclass of: SO_0000673
so part of: LOC117962862
location: <4900831..>4901905
location: region:4900831-4901905:1
so has part: feature:4900831-4901905:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4900831-4901905:1:exon

LOC117962862
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117962862
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 501-like
translation: LEPVHIKQEETQLEHVHIEEESVDLLFKDTENISRPKISHECNECGKSFRRPGSLKTHQRIHSGEKPYQCTECGKSFRELGVLKKHQRIHTGEKPHFCTECGKSFNTSGSLKRHQRLHTGEKPYQCFECGESFNQLANLKTHQRIHTGEKPYHCVECGKSFRKLGVLKKHQRIHTGEKPYHCTECGKSFNASESLKRHQRLHTGEKPYQCTECGESFNESGSLNRHQRIHTGEKPHHCVECGKSFTDKEKLKRHQRIHTGEKPYHCTECRESFSQSGSLKTHQRIHTGEKPYQCSECGESFNQLANLKTHQRIHTGEKPYHCFECGDSFSQSGSLKRHQRIHTGASLPPSQSLTSPPC
SIO_010081: LOC117962862
subclass of: SO_0000673
so part of: LOC117962862
location: <4900831..>4901905
location: region:4900831-4901905:1
so has part: feature:4900831-4901905:1:exon

XP_034766885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4900831-4901905:1:exon

LOC117398405
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398405
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4912072..4919486
location: region:4912072-4919486:1
so has part: feature:4912072-4919486:1:exon
subclass of: SO_0000010

117398405
type: Gene
SIO_000068: ncbigene

position:4912072:1
position: 4912072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4919486:1
position: 4919486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4912072-4919486:1:exon

LOC117398405
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398405
product: serine/arginine-rich splicing factor RSZ22-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034910974.1
SIO_010081: LOC117398405
subclass of: SO_0000673
so part of: LOC117398405
location: join(4912072..4913877,4917408..4919486)
location: region:4912072-4919486:1
so has part: feature:4912072-4913877:1:exon
so has part: feature:4917408-4919486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4912072-4913877:1:exon

position:4913877:1
position: 4913877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4917408-4919486:1:exon

position:4917408:1
position: 4917408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398405
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398405
product: serine/arginine-rich splicing factor RSZ22-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033997408.2
SIO_010081: LOC117398405
subclass of: SO_0000673
so part of: LOC117398405
location: join(4912078..4913877,4917422..4919486)
location: region:4912078-4919486:1
so has part: feature:4912078-4913877:1:exon
so has part: feature:4917422-4919486:1:exon

position:4912078:1
position: 4912078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4912078-4913877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4917422-4919486:1:exon

position:4917422:1
position: 4917422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398405
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398405
product: serine/arginine-rich splicing factor RSZ22-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034910972.1
SIO_010081: LOC117398405
subclass of: SO_0000673
so part of: LOC117398405
location: join(4912084..4913877,4917422..4919486)
location: region:4912084-4919486:1
so has part: feature:4912084-4913877:1:exon
so has part: feature:4917422-4919486:1:exon

position:4912084:1
position: 4912084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4912084-4913877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4917422-4919486:1:exon

LOC117398405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398405
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117398405 isoform X2
translation: MHWMGDGSPHYIASTLKDNNRSKRAIKRQKLKKELNCKQLSWLIIRAKDQPEADTNADGADVGRGVGGSGGGGNRNFHNQDKDTSCYNYGQEGHFARECQRQQQQQQQTNESNWQSAPPPQVSLYKPKPERNKAGTADTKTANKQYVLTFSKPQEAPTVDLFVNVYFSQGKSCPTRTEGRGAPQAPAGGLGDHQRPPPEALASTTLDRSVPGAPDNADSGESR
SIO_010081: LOC117398405
subclass of: SO_0000673
so part of: LOC117398405
location: join(4913385..4913877,4917408..4917586)
location: region:4913385-4917586:1
so has part: feature:4913385-4913877:1:exon
so has part: feature:4917408-4917586:1:exon

XP_034766865.1
type: Protein
SIO_000068: ncbiprotein

position:4913385:1
position: 4913385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4917586:1
position: 4917586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4913385-4913877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4917408-4917586:1:exon

LOC117398405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398405
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor RSZ22-like isoform X3
translation: MHWMGDGSPHYIASTLKDNNRSKRAIKRQKLKKELNCKQLSWLIIRAKDQPEADTNADGADVGRGVGGSGGGGNRNFHNQDKDTSCYNYGQEGHFARECQRQQQQQQQTNESNWQSAPPPQVSLYKPKPERNKAGTADTKTANKQYVLTFSKPQEAPTVDLFVNG
SIO_010081: LOC117398405
subclass of: SO_0000673
so part of: LOC117398405
location: join(4913385..4913877,4917422..4917426)
location: region:4913385-4917426:1
so has part: feature:4913385-4913877:1:exon
so has part: feature:4917422-4917426:1:exon

XP_033853299.1
type: Protein
SIO_000068: ncbiprotein

position:4917426:1
position: 4917426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4913385-4913877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4917422-4917426:1:exon

LOC117398405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398405
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syncytin-2-like isoform X1
translation: MGLSCCRTYVYYVNQSTTDLLTRRGSADSTTGQDPPMPLDTLSFGETSVQAGPINLGPGENGAGTFTNHYWVCGQAVYVSLPKHWFGCCVFVTLNTTMKVFKVNESHKVHKRRDKRSQFFSPNDVPLDSRRSSKWDKLGGALFPWFGVSQNAYEIDKVAYELETLTNLTTEGFQMMQPEMRAIRIMVMQNRMVLDMLLAEQGGVCHMVGEHCCTYIPDGDTNLTEVVQHLSTLRERLVSEHAQDTDWDPFSWIQSLLGVWGTRLFHWFIYGVVILLLFLLIITCVKKLCTKTVDTVLNMPLLTNDDQCSDSNDDPFNKMADDLMS
SIO_010081: LOC117398405
subclass of: SO_0000673
so part of: LOC117398405
location: 4918355..4919332
location: region:4918355-4919332:1
so has part: feature:4918355-4919332:1:exon

XP_034766863.1
type: Protein
SIO_000068: ncbiprotein

position:4918355:1
position: 4918355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4919332:1
position: 4919332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4918355-4919332:1:exon

LOC117965864
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965864
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4965258..4966199
location: region:4965258-4966199:1
so has part: feature:4965258-4966199:1:exon
subclass of: SO_0000011

117965864
type: Gene
SIO_000068: ncbigene

position:4965258:1
position: 4965258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4966199:1
position: 4966199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4965258-4966199:1:exon

LOC117965864
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965864
product: uncharacterized LOC117965864
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004661566.1
SIO_010081: LOC117965864
subclass of: SO_0000673
so part of: LOC117965864
location: join(4965258..4965413,4965523..4965804,4966182..4966199)
location: region:4965258-4966199:1
so has part: feature:4965258-4965413:1:exon
so has part: feature:4965523-4965804:1:exon
so has part: feature:4966182-4966199:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4965258-4965413:1:exon

position:4965413:1
position: 4965413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4965523-4965804:1:exon

position:4965523:1
position: 4965523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4965804:1
position: 4965804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4966182-4966199:1:exon

position:4966182:1
position: 4966182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965824
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965824
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4968887..4980925
location: region:4968887-4980925:1
so has part: feature:4968887-4980925:1:exon
subclass of: SO_0000010

117965824
type: Gene
SIO_000068: ncbigene

position:4968887:1
position: 4968887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4980925:1
position: 4980925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4968887-4980925:1:exon

LOC117965824
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965824
product: butyrophilin subfamily 3 member A3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034910963.1
SIO_010081: LOC117965824
subclass of: SO_0000673
so part of: LOC117965824
location: join(4968887..4969119,4969262..4969288,4969703..4970287,4979388..4980925)
location: region:4968887-4980925:1
so has part: feature:4968887-4969119:1:exon
so has part: feature:4969262-4969288:1:exon
so has part: feature:4969703-4970287:1:exon
so has part: feature:4979388-4980925:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4968887-4969119:1:exon

position:4969119:1
position: 4969119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4969262-4969288:1:exon

position:4969262:1
position: 4969262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4969288:1
position: 4969288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4969703-4970287:1:exon

position:4969703:1
position: 4969703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4970287:1
position: 4970287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4979388-4980925:1:exon

position:4979388:1
position: 4979388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965824
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965824
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 3 member A3-like
translation: MRQIPKSEWKWILNSAVDSLTLDLDTAHPRLTLPVDEKQVRRKRQDHNNPQRFDYRHCVLGREGFTSGRHYWELGVGDNTFWRLGVSRESAQRQGEFIMTPQQGYWTVEWDGDEDKDEFTAVTDPQTPLPLSLKPQKLGVYLDYDEGQLSFYNVETRSHIYTFTDMEFNPNEKLYPFFWSLEYKDLVLVSPGKMNDNFFFLLVWKWIVAASVDVTLDPDTAHPRLTLSAEGKRVRLGETRQRLPDNPERFDYRRCVVGREGFTSGRHYWQVQVVGNTLWTLGVSRESAPRKGEFSLSSQQGYWTVWWSAGEFIAFTAPRVPLPRTLKPQKLGVYLDYEEGQLSFYNVESRSHIYTFTDMEFNHNEKLYPLFCTLDSETDLVLESPDPDPVSAAD
SIO_010081: LOC117965824
subclass of: SO_0000673
so part of: LOC117965824
location: join(4969098..4969119,4969262..4969288,4969703..4970287,4979388..4979938)
location: region:4969098-4979938:1
so has part: feature:4969098-4969119:1:exon
so has part: feature:4969262-4969288:1:exon
so has part: feature:4969703-4970287:1:exon
so has part: feature:4979388-4979938:1:exon

XP_034766854.1
type: Protein
SIO_000068: ncbiprotein

position:4969098:1
position: 4969098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4979938:1
position: 4979938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4969098-4969119:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4969262-4969288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4969703-4970287:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4979388-4979938:1:exon

LOC117409877
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117409877
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 129 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117409877
subclass of: SO_0000673
so part of: LOC117409877
location: complement(4988239..4988710)
location: region:4988239-4988710:-1
so has part: feature:4988239-4988710:-1:exon

position:4988239:-1
position: 4988239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4988710:-1
position: 4988710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4988239-4988710:-1:exon

LOC117409877
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117409877
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 129 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117409877
subclass of: SO_0000673
so part of: LOC117409877
location: complement(5005557..5006749)
location: region:5005557-5006749:-1
so has part: feature:5005557-5006749:-1:exon

position:5005557:-1
position: 5005557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5005557-5006749:-1:exon

LOC117398402
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398402
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5048611..5050286)
location: region:5048611-5050286:-1
so has part: feature:5048611-5050286:-1:exon
subclass of: SO_0000010

117398402
type: Gene
SIO_000068: ncbigene

position:5048611:-1
position: 5048611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5050286:-1
position: 5050286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5048611-5050286:-1:exon

LOC117398402
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398402
product: fructose-bisphosphate aldolase B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033997400.2
SIO_010081: LOC117398402
subclass of: SO_0000673
so part of: LOC117398402
location: complement(join(5048611..5048742,5050020..5050286))
location: region:5048611-5050286:-1
so has part: feature:5050020-5050286:-1:exon
so has part: feature:5048611-5048742:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5050020-5050286:-1:exon

position:5050020:-1
position: 5050020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5048611-5048742:-1:exon

position:5048742:-1
position: 5048742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398402
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398402
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fructose-bisphosphate aldolase B-like
translation: MPLSISTPLTSAPRPNPGSTFSYGRALQASTLSAWAGKPGDLQAAQVAFSERAKINGLASTGSYIQSGQKDKAASQSLFTASYVY
SIO_010081: LOC117398402
subclass of: SO_0000673
so part of: LOC117398402
location: complement(join(5048647..5048742,5050020..5050181))
location: region:5048647-5050181:-1
so has part: feature:5050020-5050181:-1:exon
so has part: feature:5048647-5048742:-1:exon

XP_033853291.1
type: Protein
SIO_000068: ncbiprotein

position:5048647:-1
position: 5048647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5050181:-1
position: 5050181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5050020-5050181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5048647-5048742:-1:exon

LOC117398407
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398407
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5059197..5075908
location: region:5059197-5075908:1
so has part: feature:5059197-5075908:1:exon
subclass of: SO_0000011

117398407
type: Gene
SIO_000068: ncbigene

position:5059197:1
position: 5059197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5075908:1
position: 5075908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5059197-5075908:1:exon

LOC117398407
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117398407
product: uncharacterized LOC117398407, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004543915.1
SIO_010081: LOC117398407
subclass of: SO_0000673
so part of: LOC117398407
location: join(5059197..5059568,5064619..5064716,5075759..5075908)
location: region:5059197-5075908:1
so has part: feature:5059197-5059568:1:exon
so has part: feature:5064619-5064716:1:exon
so has part: feature:5075759-5075908:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5059197-5059568:1:exon

position:5059568:1
position: 5059568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5064619-5064716:1:exon

position:5064619:1
position: 5064619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5064716:1
position: 5064716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5075759-5075908:1:exon

position:5075759:1
position: 5075759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398407
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117398407
product: uncharacterized LOC117398407, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004543914.2
SIO_010081: LOC117398407
subclass of: SO_0000673
so part of: LOC117398407
location: join(5063469..5063635,5064619..5064716,5075759..5075908)
location: region:5063469-5075908:1
so has part: feature:5063469-5063635:1:exon
so has part: feature:5064619-5064716:1:exon
so has part: feature:5075759-5075908:1:exon

position:5063469:1
position: 5063469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5063469-5063635:1:exon

position:5063635:1
position: 5063635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5064619-5064716:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5075759-5075908:1:exon

LOC117398396
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398396
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5145405..5152186)
location: region:5145405-5152186:-1
so has part: feature:5145405-5152186:-1:exon
subclass of: SO_0000010

117398396
type: Gene
SIO_000068: ncbigene

position:5145405:-1
position: 5145405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5152186:-1
position: 5152186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5145405-5152186:-1:exon

LOC117398396
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398396
product: protein canopy homolog 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033997387.2
SIO_010081: LOC117398396
subclass of: SO_0000673
so part of: LOC117398396
location: complement(join(5145405..5147367,5147941..5148058,5149802..5149898,5150225..5150362,5151891..5152186))
location: region:5145405-5152186:-1
so has part: feature:5151891-5152186:-1:exon
so has part: feature:5150225-5150362:-1:exon
so has part: feature:5149802-5149898:-1:exon
so has part: feature:5147941-5148058:-1:exon
so has part: feature:5145405-5147367:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5151891-5152186:-1:exon

position:5151891:-1
position: 5151891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5150225-5150362:-1:exon

position:5150225:-1
position: 5150225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5150362:-1
position: 5150362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5149802-5149898:-1:exon

position:5149802:-1
position: 5149802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5149898:-1
position: 5149898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5147941-5148058:-1:exon

position:5147941:-1
position: 5147941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5148058:-1
position: 5148058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5145405-5147367:-1:exon

position:5147367:-1
position: 5147367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117398396
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398396
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein canopy homolog 3-like
translation: MEEKKGIPIKYVKSDIRFIEVMETICQRLMHYNLHKERTGSNRFAKCYVMVEQNEDVIEDWYRKHQDEDLTTYLCEKHVLMGENQECLDEVWTSKKGETAAIDEKKKKKKKGTNNDKENNKKKSKGRKKKTSDLETERRDRAEDFTSDEDIQKKVPLTHDKSDL
SIO_010081: LOC117398396
subclass of: SO_0000673
so part of: LOC117398396
location: complement(join(5147129..5147367,5147941..5148058,5149802..5149898,5150225..5150265))
location: region:5147129-5150265:-1
so has part: feature:5150225-5150265:-1:exon
so has part: feature:5149802-5149898:-1:exon
so has part: feature:5147941-5148058:-1:exon
so has part: feature:5147129-5147367:-1:exon

XP_033853278.2
type: Protein
SIO_000068: ncbiprotein

position:5147129:-1
position: 5147129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5150265:-1
position: 5150265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5150225-5150265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5149802-5149898:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5147941-5148058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5147129-5147367:-1:exon

LOC117398351
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5165065..5193064
location: region:5165065-5193064:1
so has part: feature:5165065-5193064:1:exon

117398351
type: Gene
SIO_000068: ncbigene

position:5165065:1
position: 5165065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5193064:1
position: 5193064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5165065-5193064:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5165065..5165205
location: region:5165065-5165205:1
so has part: feature:5165065-5165205:1:exon

position:5165205:1
position: 5165205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5165065-5165205:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5165590..5165672
location: region:5165590-5165672:1
so has part: feature:5165590-5165672:1:exon

position:5165590:1
position: 5165590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5165672:1
position: 5165672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5165590-5165672:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5166182..5166233
location: region:5166182-5166233:1
so has part: feature:5166182-5166233:1:exon

position:5166182:1
position: 5166182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5166233:1
position: 5166233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5166182-5166233:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5166314..5166360
location: region:5166314-5166360:1
so has part: feature:5166314-5166360:1:exon

position:5166314:1
position: 5166314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5166360:1
position: 5166360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5166314-5166360:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5167327..5167399
location: region:5167327-5167399:1
so has part: feature:5167327-5167399:1:exon

position:5167327:1
position: 5167327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5167399:1
position: 5167399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5167327-5167399:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5168703..5168784
location: region:5168703-5168784:1
so has part: feature:5168703-5168784:1:exon

position:5168703:1
position: 5168703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5168784:1
position: 5168784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5168703-5168784:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5169953..5170151
location: region:5169953-5170151:1
so has part: feature:5169953-5170151:1:exon

position:5169953:1
position: 5169953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5170151:1
position: 5170151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5169953-5170151:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5172217..5172299
location: region:5172217-5172299:1
so has part: feature:5172217-5172299:1:exon

position:5172217:1
position: 5172217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5172299:1
position: 5172299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5172217-5172299:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5173021..5173122
location: region:5173021-5173122:1
so has part: feature:5173021-5173122:1:exon

position:5173021:1
position: 5173021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5173122:1
position: 5173122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5173021-5173122:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5173381..5173445
location: region:5173381-5173445:1
so has part: feature:5173381-5173445:1:exon

position:5173381:1
position: 5173381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5173445:1
position: 5173445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5173381-5173445:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5173758..5173858
location: region:5173758-5173858:1
so has part: feature:5173758-5173858:1:exon

position:5173758:1
position: 5173758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5173858:1
position: 5173858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5173758-5173858:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5176182..5176313
location: region:5176182-5176313:1
so has part: feature:5176182-5176313:1:exon

position:5176182:1
position: 5176182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5176313:1
position: 5176313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5176182-5176313:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5178332..5178487
location: region:5178332-5178487:1
so has part: feature:5178332-5178487:1:exon

position:5178332:1
position: 5178332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5178487:1
position: 5178487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5178332-5178487:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5178824..5178858
location: region:5178824-5178858:1
so has part: feature:5178824-5178858:1:exon

position:5178824:1
position: 5178824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5178858:1
position: 5178858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5178824-5178858:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5179455..5179612
location: region:5179455-5179612:1
so has part: feature:5179455-5179612:1:exon

position:5179455:1
position: 5179455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5179612:1
position: 5179612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5179455-5179612:1:exon

LOC117965869
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5180533..5180927
location: region:5180533-5180927:1
so has part: feature:5180533-5180927:1:exon
subclass of: SO_0000011

117965869
type: Gene
SIO_000068: ncbigene

position:5180533:1
position: 5180533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5180927:1
position: 5180927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5180533-5180927:1:exon

LOC117965869
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965869
product: uncharacterized LOC117965869
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004661571.1
SIO_010081: LOC117965869
subclass of: SO_0000673
so part of: LOC117965869
location: join(5180533..5180566,5180837..5180927)
location: region:5180533-5180927:1
so has part: feature:5180533-5180566:1:exon
so has part: feature:5180837-5180927:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5180533-5180566:1:exon

position:5180566:1
position: 5180566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5180837-5180927:1:exon

position:5180837:1
position: 5180837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5182927..5182962
location: region:5182927-5182962:1
so has part: feature:5182927-5182962:1:exon

position:5182927:1
position: 5182927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5182962:1
position: 5182962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5182927-5182962:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5185517..5185572
location: region:5185517-5185572:1
so has part: feature:5185517-5185572:1:exon

position:5185517:1
position: 5185517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5185572:1
position: 5185572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5185517-5185572:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5185821..5185892
location: region:5185821-5185892:1
so has part: feature:5185821-5185892:1:exon

position:5185821:1
position: 5185821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5185892:1
position: 5185892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5185821-5185892:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5186097..5186256
location: region:5186097-5186256:1
so has part: feature:5186097-5186256:1:exon

position:5186097:1
position: 5186097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5186256:1
position: 5186256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5186097-5186256:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5190092..5190226
location: region:5190092-5190226:1
so has part: feature:5190092-5190226:1:exon

position:5190092:1
position: 5190092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5190226:1
position: 5190226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5190092-5190226:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5190842..5190881
location: region:5190842-5190881:1
so has part: feature:5190842-5190881:1:exon

position:5190842:1
position: 5190842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5190881:1
position: 5190881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5190842-5190881:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5191660..5191838
location: region:5191660-5191838:1
so has part: feature:5191660-5191838:1:exon

position:5191660:1
position: 5191660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5191838:1
position: 5191838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5191660-5191838:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5192116..5192371
location: region:5192116-5192371:1
so has part: feature:5192116-5192371:1:exon

position:5192116:1
position: 5192116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5192371:1
position: 5192371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5192116-5192371:1:exon

LOC117398351
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117398351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117398351
subclass of: SO_0000673
so part of: LOC117398351
location: 5192929..5193064
location: region:5192929-5193064:1
so has part: feature:5192929-5193064:1:exon

position:5192929:1
position: 5192929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5192929-5193064:1:exon

LOC117412448
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117412448
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5198782..5204227)
location: region:5198782-5204227:-1
so has part: feature:5198782-5204227:-1:exon
subclass of: SO_0000010

117412448
type: Gene
SIO_000068: ncbigene

position:5198782:-1
position: 5198782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5204227:-1
position: 5204227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5198782-5204227:-1:exon

LOC117412448
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117412448
product: protein canopy homolog 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034910993.1
SIO_010081: LOC117412448
subclass of: SO_0000673
so part of: LOC117412448
location: complement(join(5198782..5198991,5201558..5201654,5201981..5202107,5204021..5204227))
location: region:5198782-5204227:-1
so has part: feature:5204021-5204227:-1:exon
so has part: feature:5201981-5202107:-1:exon
so has part: feature:5201558-5201654:-1:exon
so has part: feature:5198782-5198991:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5204021-5204227:-1:exon

position:5204021:-1
position: 5204021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5201981-5202107:-1:exon

position:5201981:-1
position: 5201981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5202107:-1
position: 5202107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5201558-5201654:-1:exon

position:5201558:-1
position: 5201558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5201654:-1
position: 5201654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5198782-5198991:-1:exon

position:5198991:-1
position: 5198991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117412448
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117412448
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein canopy homolog 3-like
translation: MQALLFVFLFLLVPASAPAKKDDDEDWVKLPNKCEVCKYVTVEMKSAFEETGKTKEVIDTKYDYMEEKKGIPIKYVKSDIRFIEVMETICQRLMHYNLHKERTGSNRFAKGMAETFQTLHNLVHKGVKVVMDIPYELWNETSAEVADLKKQVSAIPSGPGAYTSEEEAWLTFP
SIO_010081: LOC117412448
subclass of: SO_0000673
so part of: LOC117412448
location: complement(join(5198800..5198991,5201558..5201654,5201981..5202107,5204021..5204126))
location: region:5198800-5204126:-1
so has part: feature:5204021-5204126:-1:exon
so has part: feature:5201981-5202107:-1:exon
so has part: feature:5201558-5201654:-1:exon
so has part: feature:5198800-5198991:-1:exon

XP_034766884.1
type: Protein
SIO_000068: ncbiprotein

position:5198800:-1
position: 5198800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5204126:-1
position: 5204126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5204021-5204126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5201981-5202107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5201558-5201654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5198800-5198991:-1:exon

LOC117416341
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117416341
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(5299436..5299590)
location: region:5299436-5299590:-1
so has part: feature:5299436-5299590:-1:exon
subclass of: SO_0000573

117416341
type: Gene
SIO_000068: ncbigene

position:5299436:-1
position: 5299436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5299590:-1
position: 5299590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5299436-5299590:-1:exon

LOC117416341
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 7906
gene: LOC117416341
product: 5.8S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00002
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004546544.2
SIO_010081: LOC117416341
subclass of: SO_0000673
so part of: LOC117416341
location: complement(5299436..5299590)
location: region:5299436-5299590:-1
so has part: feature:5299436-5299590:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5299436-5299590:-1:exon

LOC117965913
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965913
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(5300120..5301962)
location: region:5300120-5301962:-1
so has part: feature:5300120-5301962:-1:exon
subclass of: SO_0000573

117965913
type: Gene
SIO_000068: ncbigene

position:5300120:-1
position: 5300120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5301962:-1
position: 5301962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5300120-5301962:-1:exon

LOC117965913
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 7906
gene: LOC117965913
product: 18S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01960
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004661585.1
SIO_010081: LOC117965913
subclass of: SO_0000673
so part of: LOC117965913
location: complement(5300120..5301962)
location: region:5300120-5301962:-1
so has part: feature:5300120-5301962:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5300120-5301962:-1:exon

LOC117965867
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5318905..5319980)
location: region:5318905-5319980:-1
so has part: feature:5318905-5319980:-1:exon
subclass of: SO_0000011

117965867
type: Gene
SIO_000068: ncbigene

position:5318905:-1
position: 5318905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5319980:-1
position: 5319980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5318905-5319980:-1:exon

LOC117965867
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965867
product: uncharacterized LOC117965867
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004661569.1
SIO_010081: LOC117965867
subclass of: SO_0000673
so part of: LOC117965867
location: complement(join(5318905..5318914,5319669..5319695,5319838..5319980))
location: region:5318905-5319980:-1
so has part: feature:5319838-5319980:-1:exon
so has part: feature:5319669-5319695:-1:exon
so has part: feature:5318905-5318914:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5319838-5319980:-1:exon

position:5319838:-1
position: 5319838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5319669-5319695:-1:exon

position:5319669:-1
position: 5319669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5319695:-1
position: 5319695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5318905-5318914:-1:exon

position:5318914:-1
position: 5318914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965819
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5339258..5347001)
location: region:5339258-5347001:-1
so has part: feature:5339258-5347001:-1:exon
subclass of: SO_0000010

117965819
type: Gene
SIO_000068: ncbigene

position:5339258:-1
position: 5339258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5347001:-1
position: 5347001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5339258-5347001:-1:exon

LOC117965819
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965819
product: macrophage-expressed gene 1 protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034910948.1
SIO_010081: LOC117965819
subclass of: SO_0000673
so part of: LOC117965819
location: complement(join(5339258..5340858,5346394..5347001))
location: region:5339258-5347001:-1
so has part: feature:5346394-5347001:-1:exon
so has part: feature:5339258-5340858:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5346394-5347001:-1:exon

position:5346394:-1
position: 5346394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5339258-5340858:-1:exon

position:5340858:-1
position: 5340858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965819
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: macrophage-expressed gene 1 protein-like
translation: MLRAEPRPDPLSLIMGPLSLPFILSVSLFLHRPAEGSTASEQADGFFPNSFLRSSNPNRFLLECRRVLKIPALEVLPGGGWDNLRNVDLGRVMNFNYSQCRTTEDGSYLIPDEVFTIPQKHSRVDQSSELIDSWLQYRSVVASSINSEASFSIGLPGTFSFSINGKYSSESKRVKTHQVRDGTVTTRVQVRNLLYSVQSTPGFSLDPRFQDQVYKIAEALENNQTRLAGFLSESLVLNYGTHVLTTVHAGASLVQEDFLKSTVLSGSQDSSSSRSISVSAGLRFFDVVNVGFGNQSGASSSTQDSASRQYVGNITYSVTESHGGALFYPGITLQKWQESIANNLVAIDRTGLPLPAVFNQQSLLGLSEPTIHKLVLAVTQAIKTYYQVNTVPGCVKVESPNFNFHANVDDGSCQATVTNFSFGGVFQDCMALTTDSQDLCHELEQKNPLTGAYSCPEQYSAVKLQTDNKEQGYSTYECHQECKTTFLFFKSCNQVCGDIYRVRKARFNAYWCVATQKQVPSLSGYLFGGLYTSASPNPLTKSQSCPAGFVELKLFDGMKVCVSNDYEMQAGNSVPFGGFFSCHTGNPLSVERGGEDKENGEVSAQKCPKGFSQHLAGMSDGCQIMYCVRSSEFTEGQLPDIRLPPFIRKPLVSNAMTNTIMIMSEGNLSWVKDSKTNLWKIAQPEDFHQMSQLFNP
SIO_010081: LOC117965819
subclass of: SO_0000673
so part of: LOC117965819
location: complement(join(5339335..5340858,5346394..5346960))
location: region:5339335-5346960:-1
so has part: feature:5346394-5346960:-1:exon
so has part: feature:5339335-5340858:-1:exon

XP_034766839.1
type: Protein
SIO_000068: ncbiprotein

position:5339335:-1
position: 5339335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5346960:-1
position: 5346960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5346394-5346960:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5339335-5340858:-1:exon

LOC117398620
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5367365..5375958
location: region:5367365-5375958:1
so has part: feature:5367365-5375958:1:exon
subclass of: SO_0000010

117398620
type: Gene
SIO_000068: ncbigene

position:5367365:1
position: 5367365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5375958:1
position: 5375958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5367365-5375958:1:exon

LOC117398620
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117398620
product: interferon-induced very large GTPase 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911026.1
SIO_010081: LOC117398620
subclass of: SO_0000673
so part of: LOC117398620
location: join(5367365..5367473,5368661..5370479,5370787..5370834,5371875..5371892,5374984..5375068,5375286..5375958)
location: region:5367365-5375958:1
so has part: feature:5367365-5367473:1:exon
so has part: feature:5368661-5370479:1:exon
so has part: feature:5370787-5370834:1:exon
so has part: feature:5371875-5371892:1:exon
so has part: feature:5374984-5375068:1:exon
so has part: feature:5375286-5375958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5367365-5367473:1:exon

position:5367473:1
position: 5367473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5368661-5370479:1:exon

position:5368661:1
position: 5368661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5370479:1
position: 5370479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5370787-5370834:1:exon

position:5370787:1
position: 5370787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5370834:1
position: 5370834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5371875-5371892:1:exon

position:5371875:1
position: 5371875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5371892:1
position: 5371892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5374984-5375068:1:exon

position:5374984:1
position: 5374984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5375068:1
position: 5375068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5375286-5375958:1:exon

position:5375286:1
position: 5375286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117398620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117398620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced very large GTPase 1-like
translation: MTQEDEKRALEMRQKISDRLANVTKDLESHLKRIGRDELGNNDLKASADKSLSTLTELMNKMDTLNSNSVKRTEWTPSDLIYRASEGGVFRGILFSNDVKDEQVYRGIILDKPVECCLLGPFLSMQEKSYTFQSSEHESSFESSLKTCGASYSAELHASFAGFSVEAGGGTASSSTDSNKTSRAKAESYGSVIKQTFVPMASFEFTHTQLKLSEDALHVLKEIDDFMSRDLISRQMVVLLQSQAIKFLQLFGSHVNGSVVHFGGIHCVKASSHEVHSSQMKSKFNEMSRSIDAHVKASFSFYGGGGFSASHNNSDARESTGTHETNTSDIDIAVQMIGGPQEACSIPEWKRGLVENQSTWSVIDRGQASNFIPVWNIIMDNHFKNFNDPMGLACILRECWREMVASQARGKGARVDHPKWWDDERIDDLVKNGKEWKSFDVTQLWAVKSLENLVKRKKSLTTSENYEEQESQIKVKCERLSSLMDEYMEEEQADDLWKAFGTELISDRPKKETGGQRYGYYHFSRFIFIILKIPSFTRVAPHIIWELKRIYKDKEEAACRTNKLELDGFLTKGQRIISKNGKYTAIFQDDGNFVVYESPEGVPIWTSDTWGKRNADKVIMQGDCNLVMYDTKGTALWQSNTRMANCQACCLTLQDDGNLVIYRDNKEIWSARKIIFKHLF
SIO_010081: LOC117398620
subclass of: SO_0000673
so part of: LOC117398620
location: join(5368867..5370479,5370787..5370834,5371875..5371892,5374984..5375068,5375286..5375564)
location: region:5368867-5375564:1
so has part: feature:5368867-5370479:1:exon
so has part: feature:5370787-5370834:1:exon
so has part: feature:5371875-5371892:1:exon
so has part: feature:5374984-5375068:1:exon
so has part: feature:5375286-5375564:1:exon

XP_034766917.1
type: Protein
SIO_000068: ncbiprotein

position:5368867:1
position: 5368867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5375564:1
position: 5375564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5368867-5370479:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5370787-5370834:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5371875-5371892:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5374984-5375068:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5375286-5375564:1:exon

LOC117965842
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5383923..>5385566)
location: region:5383923-5385566:-1
so has part: feature:5383923-5385566:-1:exon
subclass of: SO_0000010

117965842
type: Gene
SIO_000068: ncbigene

position:5383923:-1
position: 5383923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5385566:-1
position: 5385566
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5383923-5385566:-1:exon

LOC117965842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965842
product: zinc finger protein 583-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034910997.1
SIO_010081: LOC117965842
subclass of: SO_0000673
so part of: LOC117965842
location: complement(5383923..>5385566)
location: region:5383923-5385566:-1
so has part: feature:5383923-5385566:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5383923-5385566:-1:exon

LOC117965842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 583-like
translation: HIKEEPELEPVHIKEETELEPVHIKEEETELEPVHIKEKTELESFCIEEESIDLLFKDSENTSLPKISHQCTECGKNFSQLRSLKRHQRIHTGEKLHHCSDCGKSFSQSGHLKSHQRTHTGEKPHHCSDCGKSFIRLGNLKQHQRIHTGEKPYHCSECGDCFSMSGSLKRHQRIHSGKKPYHCVKCGKSFSLSGNLKRHQRIHAGERPHHCSDCGKSFSQLGHLKSHQQTHTGEKPHHCFDCGKSFSR
SIO_010081: LOC117965842
subclass of: SO_0000673
so part of: LOC117965842
location: complement(5384820..>5385566)
location: region:5384820-5385566:-1
so has part: feature:5384820-5385566:-1:exon

XP_034766888.1
type: Protein
SIO_000068: ncbiprotein

position:5384820:-1
position: 5384820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5384820-5385566:-1:exon

LOC117404812
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404812
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5403896..5418117
location: region:5403896-5418117:1
so has part: feature:5403896-5418117:1:exon

117404812
type: Gene
SIO_000068: ncbigene

position:5403896:1
position: 5403896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5418117:1
position: 5418117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5403896-5418117:1:exon

LOC117404812
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404812
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117404812
subclass of: SO_0000673
so part of: LOC117404812
location: 5403896..5403949
location: region:5403896-5403949:1
so has part: feature:5403896-5403949:1:exon

position:5403949:1
position: 5403949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5403896-5403949:1:exon

LOC117404812
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404812
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117404812
subclass of: SO_0000673
so part of: LOC117404812
location: 5406522..5407020
location: region:5406522-5407020:1
so has part: feature:5406522-5407020:1:exon

position:5406522:1
position: 5406522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5407020:1
position: 5407020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5406522-5407020:1:exon

LOC117404812
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404812
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117404812
subclass of: SO_0000673
so part of: LOC117404812
location: 5416387..5418117
location: region:5416387-5418117:1
so has part: feature:5416387-5418117:1:exon

position:5416387:1
position: 5416387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5416387-5418117:1:exon

trnat-cgu
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnat-cgu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(5424603..5424674)
location: region:5424603-5424674:-1
so has part: feature:5424603-5424674:-1:exon
subclass of: SO_0000663

117404908
type: Gene
SIO_000068: ncbigene

position:5424603:-1
position: 5424603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5424674:-1
position: 5424674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5424603-5424674:-1:exon

trnat-cgu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnat-cgu
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon CGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(5424640..5424642),aa:Thr, seq:cgt)
SIO_010081: trnat-cgu
subclass of: SO_0000673
so part of: trnat-cgu
location: complement(5424603..5424674)
location: region:5424603-5424674:-1
so has part: feature:5424603-5424674:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5424603-5424674:-1:exon

trnat-cgu
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnat-cgu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(5426891..5426962)
location: region:5426891-5426962:-1
so has part: feature:5426891-5426962:-1:exon
subclass of: SO_0000663

117965914
type: Gene
SIO_000068: ncbigene

position:5426891:-1
position: 5426891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5426962:-1
position: 5426962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5426891-5426962:-1:exon

trnat-cgu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnat-cgu
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon CGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(5426928..5426930),aa:Thr, seq:cgt)
SIO_010081: trnat-cgu
subclass of: SO_0000673
so part of: trnat-cgu
location: complement(5426891..5426962)
location: region:5426891-5426962:-1
so has part: feature:5426891-5426962:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5426891-5426962:-1:exon

trnat-cgu
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnat-cgu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 5443880..5443952
location: region:5443880-5443952:1
so has part: feature:5443880-5443952:1:exon
subclass of: SO_0000663

117408238
type: Gene
SIO_000068: ncbigene

position:5443880:1
position: 5443880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5443952:1
position: 5443952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5443880-5443952:1:exon

trnat-cgu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnat-cgu
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon CGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:5443912..5443914,aa:Thr,seq:cgt)
SIO_010081: trnat-cgu
subclass of: SO_0000673
so part of: trnat-cgu
location: 5443880..5443952
location: region:5443880-5443952:1
so has part: feature:5443880-5443952:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5443880-5443952:1:exon

LOC117404824
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404824
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5451017..5479988)
location: region:5451017-5479988:-1
so has part: feature:5451017-5479988:-1:exon

117404824
type: Gene
SIO_000068: ncbigene

position:5451017:-1
position: 5451017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5479988:-1
position: 5479988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5451017-5479988:-1:exon

LOC117404824
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404824
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 80% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117404824
subclass of: SO_0000673
so part of: LOC117404824
location: complement(5451017..5452599)
location: region:5451017-5452599:-1
so has part: feature:5451017-5452599:-1:exon

position:5452599:-1
position: 5452599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5451017-5452599:-1:exon

LOC117404824
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404824
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 80% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117404824
subclass of: SO_0000673
so part of: LOC117404824
location: complement(5471971..5472100)
location: region:5471971-5472100:-1
so has part: feature:5471971-5472100:-1:exon

position:5471971:-1
position: 5471971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5472100:-1
position: 5472100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5471971-5472100:-1:exon

trnat-cgu
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: trnat-cgu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 5479533..5479604
location: region:5479533-5479604:1
so has part: feature:5479533-5479604:1:exon
subclass of: SO_0000663

117404906
type: Gene
SIO_000068: ncbigene

position:5479533:1
position: 5479533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5479604:1
position: 5479604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5479533-5479604:1:exon

trnat-cgu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7906
gene: trnat-cgu
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon CGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:5479565..5479567,aa:Thr,seq:cgt)
SIO_010081: trnat-cgu
subclass of: SO_0000673
so part of: trnat-cgu
location: 5479533..5479604
location: region:5479533-5479604:1
so has part: feature:5479533-5479604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5479533-5479604:1:exon

LOC117404824
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404824
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 80% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117404824
subclass of: SO_0000673
so part of: LOC117404824
location: complement(5479975..5479988)
location: region:5479975-5479988:-1
so has part: feature:5479975-5479988:-1:exon

position:5479975:-1
position: 5479975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5479975-5479988:-1:exon

LOC117404816
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5484174..5496881)
location: region:5484174-5496881:-1
so has part: feature:5484174-5496881:-1:exon

117404816
type: Gene
SIO_000068: ncbigene

position:5484174:-1
position: 5484174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5496881:-1
position: 5496881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5484174-5496881:-1:exon

LOC117404816
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404816
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117404816
subclass of: SO_0000673
so part of: LOC117404816
location: complement(5484174..5485887)
location: region:5484174-5485887:-1
so has part: feature:5484174-5485887:-1:exon

position:5485887:-1
position: 5485887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5484174-5485887:-1:exon

LOC117404816
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117404816
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117404816
subclass of: SO_0000673
so part of: LOC117404816
location: complement(5496323..5496881)
location: region:5496323-5496881:-1
so has part: feature:5496323-5496881:-1:exon

position:5496323:-1
position: 5496323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5496323-5496881:-1:exon

LOC117407791
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117407791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5534457..5605703
location: region:5534457-5605703:1
so has part: feature:5534457-5605703:1:exon

117407791
type: Gene
SIO_000068: ncbigene

position:5534457:1
position: 5534457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5605703:1
position: 5605703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5534457-5605703:1:exon

LOC117407791
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407791
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 141 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117407791
subclass of: SO_0000673
so part of: LOC117407791
location: 5534457..5534465
location: region:5534457-5534465:1
so has part: feature:5534457-5534465:1:exon

position:5534465:1
position: 5534465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5534457-5534465:1:exon

LOC117407791
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407791
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 141 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117407791
subclass of: SO_0000673
so part of: LOC117407791
location: 5535238..5536904
location: region:5535238-5536904:1
so has part: feature:5535238-5536904:1:exon

position:5535238:1
position: 5535238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5536904:1
position: 5536904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5535238-5536904:1:exon

LOC117407791
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407791
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 141 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117407791
subclass of: SO_0000673
so part of: LOC117407791
location: 5551384..5551903
location: region:5551384-5551903:1
so has part: feature:5551384-5551903:1:exon

position:5551384:1
position: 5551384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5551903:1
position: 5551903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5551384-5551903:1:exon

LOC117407791
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117407791
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 141 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117407791
subclass of: SO_0000673
so part of: LOC117407791
location: 5604405..5605703
location: region:5604405-5605703:1
so has part: feature:5604405-5605703:1:exon

position:5604405:1
position: 5604405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5604405-5605703:1:exon

LOC117965889
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965889
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5625164..5625923)
location: region:5625164-5625923:-1
so has part: feature:5625164-5625923:-1:exon

117965889
type: Gene
SIO_000068: ncbigene

position:5625164:-1
position: 5625164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5625923:-1
position: 5625923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5625164-5625923:-1:exon

LOC117965889
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117965889
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117965889
subclass of: SO_0000673
so part of: LOC117965889
location: complement(5625164..5625923)
location: region:5625164-5625923:-1
so has part: feature:5625164-5625923:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5625164-5625923:-1:exon

LOC117965849
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965849
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5838666..5839570
location: region:5838666-5839570:1
so has part: feature:5838666-5839570:1:exon
subclass of: SO_0000011

117965849
type: Gene
SIO_000068: ncbigene

position:5838666:1
position: 5838666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5839570:1
position: 5839570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5838666-5839570:1:exon

LOC117965849
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965849
product: uncharacterized LOC117965849
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004661538.1
SIO_010081: LOC117965849
subclass of: SO_0000673
so part of: LOC117965849
location: join(5838666..5838723,5839205..5839306,5839536..5839570)
location: region:5838666-5839570:1
so has part: feature:5838666-5838723:1:exon
so has part: feature:5839205-5839306:1:exon
so has part: feature:5839536-5839570:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5838666-5838723:1:exon

position:5838723:1
position: 5838723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5839205-5839306:1:exon

position:5839205:1
position: 5839205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5839306:1
position: 5839306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5839536-5839570:1:exon

position:5839536:1
position: 5839536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117419604
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117419604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5982442..5987320
location: region:5982442-5987320:1
so has part: feature:5982442-5987320:1:exon
subclass of: SO_0000011

117419604
type: Gene
SIO_000068: ncbigene

position:5982442:1
position: 5982442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5987320:1
position: 5987320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5982442-5987320:1:exon

LOC117419604
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117419604
product: uncharacterized LOC117419604
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004661531.1
SIO_010081: LOC117419604
subclass of: SO_0000673
so part of: LOC117419604
location: join(5982442..5982548,5986568..5987320)
location: region:5982442-5987320:1
so has part: feature:5982442-5982548:1:exon
so has part: feature:5986568-5987320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5982442-5982548:1:exon

position:5982548:1
position: 5982548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5986568-5987320:1:exon

position:5986568:1
position: 5986568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965910
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965910
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 5993316..5993438
location: region:5993316-5993438:1
so has part: feature:5993316-5993438:1:exon

117965910
type: Gene
SIO_000068: ncbigene

position:5993316:1
position: 5993316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5993438:1
position: 5993438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5993316-5993438:1:exon

LOC117965910
type: Exon
subclass of: SO_0000147
RO_0002162: 7906
gene: LOC117965910
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117965910
subclass of: SO_0000673
so part of: LOC117965910
location: 5993316..5993438
location: region:5993316-5993438:1
so has part: feature:5993316-5993438:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5993316-5993438:1:exon

LOC117965860
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6018935..6023725)
location: region:6018935-6023725:-1
so has part: feature:6018935-6023725:-1:exon
subclass of: SO_0000011

117965860
type: Gene
SIO_000068: ncbigene

position:6018935:-1
position: 6018935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6023725:-1
position: 6023725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6018935-6023725:-1:exon

LOC117965860
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965860
product: uncharacterized LOC117965860
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004661557.1
SIO_010081: LOC117965860
subclass of: SO_0000673
so part of: LOC117965860
location: complement(join(6018935..6018958,6023090..6023144,6023584..6023725))
location: region:6018935-6023725:-1
so has part: feature:6023584-6023725:-1:exon
so has part: feature:6023090-6023144:-1:exon
so has part: feature:6018935-6018958:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6023584-6023725:-1:exon

position:6023584:-1
position: 6023584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6023090-6023144:-1:exon

position:6023090:-1
position: 6023090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6023144:-1
position: 6023144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6018935-6018958:-1:exon

position:6018958:-1
position: 6018958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965826
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6035139..6037257)
location: region:6035139-6037257:-1
so has part: feature:6035139-6037257:-1:exon
subclass of: SO_0000010

117965826
type: Gene
SIO_000068: ncbigene

position:6035139:-1
position: 6035139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6037257:-1
position: 6037257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6035139-6037257:-1:exon

LOC117965826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965826
product: zinc finger protein 501-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034910969.1
SIO_010081: LOC117965826
subclass of: SO_0000673
so part of: LOC117965826
location: complement(6035139..6037257)
location: region:6035139-6037257:-1
so has part: feature:6035139-6037257:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6035139-6037257:-1:exon

LOC117965826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 501-like
translation: MSQPKISHQCNECVKSFSRPRSLKTHQRIHTGEKPYHCTECGESFNVSGSLKKHQRLHTGEKPYQCTECGKSFRKLGALKNHQLIHTGEKPHHCTECGKSFRESGALKKHKLIHTGEKPHHCTECGKSFRKLGALKNHQLIHTGEKPYQCTECGKSFRELGSLKRHQRIHTGEKPYQCTECGESFSESGNLNRHQHIHTGEKPYHCVQCGKSFTDKGTLNKHQRIHTGEKPYQCTECGKSFNASGDLKRHHRFHTGEKPYHCFECEKSFTDKGKLKKHQRIHTGEKPYHCVECGESFRQSGTLKTHQRIHTGASLPPSQSLTSPPCLLECVES
SIO_010081: LOC117965826
subclass of: SO_0000673
so part of: LOC117965826
location: complement(6036153..6037154)
location: region:6036153-6037154:-1
so has part: feature:6036153-6037154:-1:exon

XP_034766860.1
type: Protein
SIO_000068: ncbiprotein

position:6036153:-1
position: 6036153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6037154:-1
position: 6037154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6036153-6037154:-1:exon

LOC117398437
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117398437
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6037697..6054092)
location: region:6037697-6054092:-1
so has part: feature:6037697-6054092:-1:exon
subclass of: SO_0000011

117398437
type: Gene
SIO_000068: ncbigene

position:6037697:-1
position: 6037697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6054092:-1
position: 6054092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6037697-6054092:-1:exon

LOC117398437
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117398437
product: uncharacterized LOC117398437
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004661563.1
SIO_010081: LOC117398437
subclass of: SO_0000673
so part of: LOC117398437
location: complement(join(6037697..6037906,6050466..6050589,6054061..6054092))
location: region:6037697-6054092:-1
so has part: feature:6054061-6054092:-1:exon
so has part: feature:6050466-6050589:-1:exon
so has part: feature:6037697-6037906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6054061-6054092:-1:exon

position:6054061:-1
position: 6054061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6050466-6050589:-1:exon

position:6050466:-1
position: 6050466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6050589:-1
position: 6050589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6037697-6037906:-1:exon

position:6037906:-1
position: 6037906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965847
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6060192..6061668
location: region:6060192-6061668:1
so has part: feature:6060192-6061668:1:exon
subclass of: SO_0000011

117965847
type: Gene
SIO_000068: ncbigene

position:6060192:1
position: 6060192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6061668:1
position: 6061668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6060192-6061668:1:exon

LOC117965847
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965847
product: uncharacterized LOC117965847
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004661536.1
SIO_010081: LOC117965847
subclass of: SO_0000673
so part of: LOC117965847
location: join(6060192..6060249,6060764..6060865,6061099..6061129,6061625..6061668)
location: region:6060192-6061668:1
so has part: feature:6060192-6060249:1:exon
so has part: feature:6060764-6060865:1:exon
so has part: feature:6061099-6061129:1:exon
so has part: feature:6061625-6061668:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6060192-6060249:1:exon

position:6060249:1
position: 6060249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6060764-6060865:1:exon

position:6060764:1
position: 6060764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6060865:1
position: 6060865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6061099-6061129:1:exon

position:6061099:1
position: 6061099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6061129:1
position: 6061129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6061625-6061668:1:exon

position:6061625:1
position: 6061625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965890
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6084818..6086631
location: region:6084818-6086631:1
so has part: feature:6084818-6086631:1:exon
subclass of: SO_0000010

117965890
type: Gene
SIO_000068: ncbigene

position:6084818:1
position: 6084818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6086631:1
position: 6086631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6084818-6086631:1:exon

LOC117965890
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965890
product: claudin domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_034911027.1
SIO_010081: LOC117965890
subclass of: SO_0000673
so part of: LOC117965890
location: join(6084818..6084893,6085906..6086040,6086444..6086631)
location: region:6084818-6086631:1
so has part: feature:6084818-6084893:1:exon
so has part: feature:6085906-6086040:1:exon
so has part: feature:6086444-6086631:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6084818-6084893:1:exon

position:6084893:1
position: 6084893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6085906-6086040:1:exon

position:6085906:1
position: 6085906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6086040:1
position: 6086040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6086444-6086631:1:exon

position:6086444:1
position: 6086444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin domain-containing protein 1-like
translation: MPRESGGPDWLGGVPGSLNAAAPVRDLWQCQFLLPFVSLGLMFFRALIAMCACACHSMYSTMGTRVLHLLAGLCTLGAVGCFMAGVQLLHSRVELPDGGPRGGVQFMTAALLICVSRSSHKEYSHMQAYRVA
SIO_010081: LOC117965890
subclass of: SO_0000673
so part of: LOC117965890
location: join(6084818..6084893,6085906..6086040,6086444..6086631)
location: region:6084818-6086631:1
so has part: feature:6084818-6084893:1:exon
so has part: feature:6085906-6086040:1:exon
so has part: feature:6086444-6086631:1:exon

XP_034766918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6084818-6084893:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6085906-6086040:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6086444-6086631:1:exon

LOC117965862
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965862
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6136914..6138057)
location: region:6136914-6138057:-1
so has part: feature:6136914-6138057:-1:exon
subclass of: SO_0000011

117965862
type: Gene
SIO_000068: ncbigene

position:6136914:-1
position: 6136914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6138057:-1
position: 6138057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6136914-6138057:-1:exon

LOC117965862
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965862
product: uncharacterized LOC117965862
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004661561.1
SIO_010081: LOC117965862
subclass of: SO_0000673
so part of: LOC117965862
location: complement(join(6136914..6137128,6137326..6137414,6138019..6138057))
location: region:6136914-6138057:-1
so has part: feature:6138019-6138057:-1:exon
so has part: feature:6137326-6137414:-1:exon
so has part: feature:6136914-6137128:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6138019-6138057:-1:exon

position:6138019:-1
position: 6138019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6137326-6137414:-1:exon

position:6137326:-1
position: 6137326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6137414:-1
position: 6137414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6136914-6137128:-1:exon

position:6137128:-1
position: 6137128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117407879
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117407879
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6176832..6178075)
location: region:6176832-6178075:-1
so has part: feature:6176832-6178075:-1:exon
subclass of: SO_0000010

117407879
type: Gene
SIO_000068: ncbigene

position:6176832:-1
position: 6176832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6178075:-1
position: 6178075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6176832-6178075:-1:exon

LOC117407879
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117407879
product: claudin domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034910995.1
SIO_010081: LOC117407879
subclass of: SO_0000673
so part of: LOC117407879
location: complement(join(6176832..6177019,6177389..6178075))
location: region:6176832-6178075:-1
so has part: feature:6177389-6178075:-1:exon
so has part: feature:6176832-6177019:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6177389-6178075:-1:exon

position:6177389:-1
position: 6177389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6176832-6177019:-1:exon

position:6177019:-1
position: 6177019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117407879
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117407879
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin domain-containing protein 1-like
translation: MERIRFWGCRAWGCPLITCVLCVSDLWRCQFLLPIVSLGLMFFGALIAMCACACHSMNSTMGTRVLHLLAGLCTLGAVGCFMAGVQLLHSRVELLDGGPRGGVQFMTAVLLICVSRSSHREYSHMQAYRVA
SIO_010081: LOC117407879
subclass of: SO_0000673
so part of: LOC117407879
location: complement(join(6176832..6177019,6177389..6177596))
location: region:6176832-6177596:-1
so has part: feature:6177389-6177596:-1:exon
so has part: feature:6176832-6177019:-1:exon

XP_034766886.1
type: Protein
SIO_000068: ncbiprotein

position:6177596:-1
position: 6177596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6177389-6177596:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6176832-6177019:-1:exon

LOC117965846
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965846
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6181027..6182495)
location: region:6181027-6182495:-1
so has part: feature:6181027-6182495:-1:exon
subclass of: SO_0000011

117965846
type: Gene
SIO_000068: ncbigene

position:6181027:-1
position: 6181027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6182495:-1
position: 6182495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6181027-6182495:-1:exon

LOC117965846
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117965846
product: uncharacterized LOC117965846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004661535.1
SIO_010081: LOC117965846
subclass of: SO_0000673
so part of: LOC117965846
location: complement(join(6181027..6181070,6181567..6181597,6181826..6181927,6182438..6182495))
location: region:6181027-6182495:-1
so has part: feature:6182438-6182495:-1:exon
so has part: feature:6181826-6181927:-1:exon
so has part: feature:6181567-6181597:-1:exon
so has part: feature:6181027-6181070:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6182438-6182495:-1:exon

position:6182438:-1
position: 6182438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6181826-6181927:-1:exon

position:6181826:-1
position: 6181826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6181927:-1
position: 6181927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6181567-6181597:-1:exon

position:6181567:-1
position: 6181567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6181597:-1
position: 6181597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6181027-6181070:-1:exon

position:6181070:-1
position: 6181070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117407843
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117407843
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6205581..6206254)
location: region:6205581-6206254:-1
so has part: feature:6205581-6206254:-1:exon
subclass of: SO_0000011

117407843
type: Gene
SIO_000068: ncbigene

position:6205581:-1
position: 6205581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6206254:-1
position: 6206254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6205581-6206254:-1:exon

LOC117407843
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7906
nc RNA class: lncRNA
gene: LOC117407843
product: uncharacterized LOC117407843
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004661558.1
SIO_010081: LOC117407843
subclass of: SO_0000673
so part of: LOC117407843
location: complement(join(6205581..6205671,6206045..6206109,6206187..6206254))
location: region:6205581-6206254:-1
so has part: feature:6206187-6206254:-1:exon
so has part: feature:6206045-6206109:-1:exon
so has part: feature:6205581-6205671:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6206187-6206254:-1:exon

position:6206187:-1
position: 6206187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6206045-6206109:-1:exon

position:6206045:-1
position: 6206045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6206109:-1
position: 6206109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6205581-6205671:-1:exon

position:6205671:-1
position: 6205671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965891
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965891
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6207145..>6225927
location: region:6207145-6225927:1
so has part: feature:6207145-6225927:1:exon
subclass of: SO_0000010

117965891
type: Gene
SIO_000068: ncbigene

position:6207145:1
position: 6207145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6225927:1
position: 6225927
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6207145-6225927:1:exon

LOC117965891
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965891
product: Fc receptor-like A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911028.1
SIO_010081: LOC117965891
subclass of: SO_0000673
so part of: LOC117965891
location: join(6207145..6207194,6215378..6215562,6216829..6217095,6219285..6219578,6222996..6223289,6223614..6223892,6225875..>6225927)
location: region:6207145-6225927:1
so has part: feature:6207145-6207194:1:exon
so has part: feature:6215378-6215562:1:exon
so has part: feature:6216829-6217095:1:exon
so has part: feature:6219285-6219578:1:exon
so has part: feature:6222996-6223289:1:exon
so has part: feature:6223614-6223892:1:exon
so has part: feature:6225875-6225927:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6207145-6207194:1:exon

position:6207194:1
position: 6207194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6215378-6215562:1:exon

position:6215378:1
position: 6215378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6215562:1
position: 6215562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6216829-6217095:1:exon

position:6216829:1
position: 6216829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6217095:1
position: 6217095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6219285-6219578:1:exon

position:6219285:1
position: 6219285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6219578:1
position: 6219578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6222996-6223289:1:exon

position:6222996:1
position: 6222996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6223289:1
position: 6223289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6223614-6223892:1:exon

position:6223614:1
position: 6223614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6223892:1
position: 6223892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6225875-6225927:1:exon

position:6225875:1
position: 6225875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117965891
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965891
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fc receptor-like A
translation: MARVELSETCLIPKFICAGWRFKQYRAGREEARCSDQYSRRYGDSCTISKARHSHSGVYWCESASGQERSNAVNLTVSYGWVILQTPSQPVFEGDTLTLRCLLRDGYKATRVIFYKYNRELQSRAGKELSVDHVSKSDEGFYKCKAWWWWDSSPYSGETAEVRVSVRELPQTTLTLEPPFPEIFTGETVTLRCGVEGGSAVWKYLWYKDSEDTPGLQTAGLSITGDSYTITAAAVSDQGQYCCRGQRKSRPTSSQLSNPVSVTVSAGKPKPALTREPAGEISEGDTVTLSCVVKGGSGGWRYLWYKNRQGAPVYQTDSSSGTGAGYTISAAALSHSGEYWCRAGRGRNTSYSQYSEGVKMQVSELFSTPTLTVLPGASVWEGEAVTLQCGAHINKQGTQLQYRYSKDNGTVRGAGSQDQHSIPAAGLRDTGRYQCEVEAAGTGLKKRSASVSLTVRALFSRVTLTAYPGSTVKE
SIO_010081: LOC117965891
subclass of: SO_0000673
so part of: LOC117965891
location: join(6207145..6207194,6215378..6215562,6216829..6217095,6219285..6219578,6222996..6223289,6223614..6223892,6225875..>6225927)
location: region:6207145-6225927:1
so has part: feature:6207145-6207194:1:exon
so has part: feature:6215378-6215562:1:exon
so has part: feature:6216829-6217095:1:exon
so has part: feature:6219285-6219578:1:exon
so has part: feature:6222996-6223289:1:exon
so has part: feature:6223614-6223892:1:exon
so has part: feature:6225875-6225927:1:exon

XP_034766919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6207145-6207194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6215378-6215562:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216829-6217095:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6219285-6219578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6222996-6223289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6223614-6223892:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6225875-6225927:1:exon

LOC117404821
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117404821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6244303..6251178)
location: region:6244303-6251178:-1
so has part: feature:6244303-6251178:-1:exon
subclass of: SO_0000010

117404821
type: Gene
SIO_000068: ncbigene

position:6244303:-1
position: 6244303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6251178:-1
position: 6251178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6244303-6251178:-1:exon

LOC117404821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404821
product: low affinity immunoglobulin gamma Fc region receptor III-A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034910970.1
SIO_010081: LOC117404821
subclass of: SO_0000673
so part of: LOC117404821
location: complement(join(6244303..6244475,6245231..6245332,6246064..6246357,6246846..6247139,6250918..6251178))
location: region:6244303-6251178:-1
so has part: feature:6250918-6251178:-1:exon
so has part: feature:6246846-6247139:-1:exon
so has part: feature:6246064-6246357:-1:exon
so has part: feature:6245231-6245332:-1:exon
so has part: feature:6244303-6244475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6250918-6251178:-1:exon

position:6250918:-1
position: 6250918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6246846-6247139:-1:exon

position:6246846:-1
position: 6246846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6247139:-1
position: 6247139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6246064-6246357:-1:exon

position:6246064:-1
position: 6246064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6246357:-1
position: 6246357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6245231-6245332:-1:exon

position:6245231:-1
position: 6245231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6245332:-1
position: 6245332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6244303-6244475:-1:exon

position:6244475:-1
position: 6244475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117404821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117404821
product: low affinity immunoglobulin gamma Fc region receptor III-A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034910971.1
SIO_010081: LOC117404821
subclass of: SO_0000673
so part of: LOC117404821
location: complement(join(6244303..6244475,6244972..6245002,6245231..6245332,6246064..6246357,6246846..6247139,6250918..6251169))
location: region:6244303-6251169:-1
so has part: feature:6250918-6251169:-1:exon
so has part: feature:6246846-6247139:-1:exon
so has part: feature:6246064-6246357:-1:exon
so has part: feature:6245231-6245332:-1:exon
so has part: feature:6244972-6245002:-1:exon
so has part: feature:6244303-6244475:-1:exon

position:6251169:-1
position: 6251169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6250918-6251169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6246846-6247139:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6246064-6246357:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6245231-6245332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6244972-6245002:-1:exon

position:6244972:-1
position: 6244972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6245002:-1
position: 6245002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6244303-6244475:-1:exon

LOC117404821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low affinity immunoglobulin gamma Fc region receptor III-A-like isoform X1
translation: MVIFYKDNKELQSWADTELSVDRVSKSDEGSYKCRAWRRMRGSSYSSDSAEVRVSVRERPQAVLTREPAWTQIYESESVTLRCQVQGGYTDWRFTWYKAGRNAPVTQDYYSRIDGDRYTISSATRDHSGEYTCKGERTGNPSYSKTSDALTLRVSVDTPKPVLTREPAGEIFDGDTVTLSCVVEGGSGGWRYLWYKDRQGAPVYQTDSSSGTGAGYTISAAALSHSGEYWCGAGRGRNTSYSQYSDPIWVNVTASWHSAVAIGYRVSFTLIHFIVFTLLLLQYCRIQGKPRIRIRSSQQRGLSSPAVCSTLEWNWNSAALPETGVELE
SIO_010081: LOC117404821
subclass of: SO_0000673
so part of: LOC117404821
location: complement(join(6244351..6244475,6245231..6245332,6246064..6246357,6246846..6247139,6250918..6251089))
location: region:6244351-6251089:-1
so has part: feature:6250918-6251089:-1:exon
so has part: feature:6246846-6247139:-1:exon
so has part: feature:6246064-6246357:-1:exon
so has part: feature:6245231-6245332:-1:exon
so has part: feature:6244351-6244475:-1:exon

XP_034766861.1
type: Protein
SIO_000068: ncbiprotein

position:6244351:-1
position: 6244351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6251089:-1
position: 6251089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6250918-6251089:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6246846-6247139:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6246064-6246357:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6245231-6245332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6244351-6244475:-1:exon

LOC117404821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117404821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low affinity immunoglobulin gamma Fc region receptor III-A-like isoform X2
translation: MVIFYKDNKELQSWADTELSVDRVSKSDEGSYKCRAWRRMRGSSYSSDSAEVRVSVRERPQAVLTREPAWTQIYESESVTLRCQVQGGYTDWRFTWYKAGRNAPVTQDYYSRIDGDRYTISSATRDHSGEYTCKGERTGNPSYSKTSDALTLRVSVDTPKPVLTREPAGEIFDGDTVTLSCVVEGGSGGWRYLWYKDRQGAPVYQTDSSSGTGAGYTISAAALSHSGEYWCGAGRGRNTSYSQYSDPIWVNVTASWHSAVAIGYRVSFTLIHFIVFTLLLLQYCRIQGSLCLAGGKSRKTSDQDQEQSAEGIELSSRVQHTGVELE
SIO_010081: LOC117404821
subclass of: SO_0000673
so part of: LOC117404821
location: complement(join(6244388..6244475,6244972..6245002,6245231..6245332,6246064..6246357,6246846..6247139,6250918..6251089))
location: region:6244388-6251089:-1
so has part: feature:6250918-6251089:-1:exon
so has part: feature:6246846-6247139:-1:exon
so has part: feature:6246064-6246357:-1:exon
so has part: feature:6245231-6245332:-1:exon
so has part: feature:6244972-6245002:-1:exon
so has part: feature:6244388-6244475:-1:exon

XP_034766862.1
type: Protein
SIO_000068: ncbiprotein

position:6244388:-1
position: 6244388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6250918-6251089:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6246846-6247139:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6246064-6246357:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6245231-6245332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6244972-6245002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6244388-6244475:-1:exon

LOC117962890
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117962890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6297329..6304072)
location: region:6297329-6304072:-1
so has part: feature:6297329-6304072:-1:exon
subclass of: SO_0000010

117962890
type: Gene
SIO_000068: ncbigene

position:6297329:-1
position: 6297329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6304072:-1
position: 6304072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6297329-6304072:-1:exon

LOC117962890
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117962890
product: E3 ubiquitin-protein ligase TRIM39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911029.1
SIO_010081: LOC117962890
subclass of: SO_0000673
so part of: LOC117962890
location: complement(join(6297329..6298217,6300819..6300841,6304053..6304072))
location: region:6297329-6304072:-1
so has part: feature:6304053-6304072:-1:exon
so has part: feature:6300819-6300841:-1:exon
so has part: feature:6297329-6298217:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6304053-6304072:-1:exon

position:6304053:-1
position: 6304053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6300819-6300841:-1:exon

position:6300819:-1
position: 6300819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6300841:-1
position: 6300841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6297329-6298217:-1:exon

position:6298217:-1
position: 6298217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117962890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117962890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: MAYVAMWKWILSSAVDVTLDPDTAYPWLTLSVEGKRVRLGETRQDLPDNPERFDYRSCVLGREGFTSGRRYWQVQVGGNTWWRLGVSRESAKRKGGFSTTPKQGYWAVWWEGGNKDEFTALTDPRTPLPLSLKPRRLGVYLDYEEGQLSFYNVETRSHIYTFTDMEFNPNEKLYPLFYTYSMTDLVLESPDPVSAAD
SIO_010081: LOC117962890
subclass of: SO_0000673
so part of: LOC117962890
location: complement(join(6297667..6298217,6300819..6300841,6304053..6304072))
location: region:6297667-6304072:-1
so has part: feature:6304053-6304072:-1:exon
so has part: feature:6300819-6300841:-1:exon
so has part: feature:6297667-6298217:-1:exon

XP_034766920.1
type: Protein
SIO_000068: ncbiprotein

position:6297667:-1
position: 6297667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6304053-6304072:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6300819-6300841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6297667-6298217:-1:exon

LOC117965841
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6332061..6332890)
location: region:6332061-6332890:-1
so has part: feature:6332061-6332890:-1:exon
subclass of: SO_0000010

117965841
type: Gene
SIO_000068: ncbigene

position:6332061:-1
position: 6332061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6332890:-1
position: 6332890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6332061-6332890:-1:exon

LOC117965841
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965841
product: claudin domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034910996.1
SIO_010081: LOC117965841
subclass of: SO_0000673
so part of: LOC117965841
location: complement(join(6332061..6332248,6332640..6332890))
location: region:6332061-6332890:-1
so has part: feature:6332640-6332890:-1:exon
so has part: feature:6332061-6332248:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6332640-6332890:-1:exon

position:6332640:-1
position: 6332640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6332061-6332248:-1:exon

position:6332248:-1
position: 6332248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117965841
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7906
gene: LOC117965841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin domain-containing protein 1-like
translation: MERIRFWGCRAWGCPLITCVLCVSDLWRCQFLLPFVSLGLMFFGALIAMCACACHSMYSTMGTRVLHLLAGLCTLGAVGCFMAGVQLLHSRVELLDGGLRGGVQFMTAALLICVSRSSHKEYSHMQAYRVA
SIO_010081: LOC117965841
subclass of: SO_0000673
so part of: LOC117965841
location: complement(join(6332061..6332248,6332640..6332847))
location: region:6332061-6332847:-1
so has part: feature:6332640-6332847:-1:exon
so has part: feature:6332061-6332248:-1:exon

XP_034766887.1
type: Protein
SIO_000068: ncbiprotein

position:6332847:-1
position: 6332847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6332640-6332847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6332061-6332248:-1:exon

LOC117965892
type: Gene
subclass of: SO_0000704
RO_0002162: 7906
gene: LOC117965892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6340410..6352402)
location: region:6340410-6352402:-1
so has part: feature:6340410-6352402:-1:exon
subclass of: SO_0000010

117965892
type: Gene
SIO_000068: ncbigene

position:6340410:-1
position: 6340410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6352402:-1
position: 6352402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6340410-6352402:-1:exon

LOC117965892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7906
gene: LOC117965892
product: Fc receptor-like protein 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034911030.1
SIO_010081: LOC117965892
subclass of: SO_0000673
so part of: LOC117965892
location: complement(join(6340410..6340421,6341061..6341326,6341863..6342144,6343992..6344285,6345441..6345476,6352341..6352402))
location: region:6340410-6352402:-1
so has part: feature:6352341-6352402:-1:exon
so has part: feature:6345441-6345476:-1:exon
so has part: feature:6343992-6344285:-1:exon
so has part: feature:6341863-6342144:-1:exon
so has part: feature:6341061-6341326:-1:exon
so has part: feature:6340410-6340421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6352341-6352402:-1:exon

position:6352341:-1
position: 6352341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition