Protopterus annectens isolate FY-2018-M chromosome 7.part1, PAN1.0, whole genome shotgun sequence.
Protopterus annectens (West African lungfish)
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Dipnomorpha; Ceratodontiformes; Lepidosirenoidei; Protopteridae; Protopterus.
African lungfish genome sheds light on the vertebrate water-to-land transition
REFSEQ INFORMATION: The reference sequence is identical to\nCM033088.1.\nAssembly name: PAN1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Northwestern Polytechnical\nUniversity on 2021/07/20. The original whole-genome shotgun project\nhas the accession JAGYFI000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Northwestern Polytechnical University\nAssembly Method :: wtdbg v. huge\nAssembly Name :: PAN1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 50.0x\nSequencing Technology :: Oxford Nanopore\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Protopterus annectens Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
cytochrome b-c1 complex subunit 1, mitochondrial
COORDINATES: polyA evidence [ECO:0006239]
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins
cadherin EGF LAG seven-pass G-type receptor 3, transcript variant X2
cadherin EGF LAG seven-pass G-type receptor 3, transcript variant X1
cadherin EGF LAG seven-pass G-type receptor 3 isoform X2
cadherin EGF LAG seven-pass G-type receptor 3 isoform X1
cadherin EGF LAG seven-pass G-type receptor 3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
cadherin EGF LAG seven-pass G-type receptor 3 isoform X3
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00003
eukaryotic translation initiation factor 4E family member 3
eukaryotic translation initiation factor 4E type 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
GATA binding protein 2, transcript variant X2
GATA binding protein 2, transcript variant X3
GATA binding protein 2, transcript variant X1
GATA binding protein 2, transcript variant X4
endothelial transcription factor GATA-2 isoform X1
endothelial transcription factor GATA-2 isoform X2
uncharacterized LOC122807524, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC122807524, transcript variant X2
eukaryotic elongation factor, selenocysteine-tRNA specific
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
selenocysteine-specific elongation factor
similar to RNA sequence (same species):INSD:GGXP01043412.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 154 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 154 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
protein transport protein Sec61 subunit alpha
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
KH RNA binding domain containing, signal transduction associated 3, transcript variant X2
KH RNA binding domain containing, signal transduction associated 3, transcript variant X1
KH domain-containing, RNA-binding, signal transduction-associated protein 3
coiled-coil-helix-coiled-coil-helix domain containing 6
transmembrane protein adipocyte associated 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transmembrane protein adipocyte-associated 1
minichromosome maintenance complex component 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
ankyrin repeat and BTB domain containing 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ankyrin repeat and BTB/POZ domain-containing protein 1
monoglyceride lipase, transcript variant X1
monoglyceride lipase, transcript variant X2
kelch repeat and BTB domain containing 12
kelch repeat and BTB domain-containing protein 12
COORDINATES: nucleotide motif:Rfam:12.0:RF00020
transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
U3 small nucleolar ribonucleoprotein protein MPP10
methylmalonyl-CoA epimerase, mitochondrial
amyloid beta precursor protein binding family A member 2, transcript variant X1
amyloid beta precursor protein binding family A member 2, transcript variant X5
amyloid beta precursor protein binding family A member 2, transcript variant X6
amyloid beta precursor protein binding family A member 2, transcript variant X4
amyloid beta precursor protein binding family A member 2, transcript variant X7
amyloid beta precursor protein binding family A member 2, transcript variant X3
amyloid beta precursor protein binding family A member 2, transcript variant X2
amyloid-beta A4 precursor protein-binding family A member 2 isoform X1
amyloid-beta A4 precursor protein-binding family A member 2 isoform X2
family with sequence similarity 189 member A1, transcript variant X1
family with sequence similarity 189 member A1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
tight junction protein 1, transcript variant X6
tight junction protein 1, transcript variant X7
tight junction protein 1, transcript variant X4
tight junction protein 1, transcript variant X3
tight junction protein 1, transcript variant X5
tight junction protein 1, transcript variant X2
tight junction protein 1, transcript variant X1
COORDINATES: nucleotide motif:Rfam:12.0:RF02543
COORDINATES: nucleotide motif:Rfam:12.0:RF00002
La ribonucleoprotein 6, translational regulator
leucine-rich repeat-containing protein 49
thrombospondin type-1 domain-containing protein 4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 565 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
thrombospondin type 1 domain containing 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
thrombospondin type-1 domain-containing protein 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 65% coverage of the annotated genomic feature by RNAseq alignments
similar to RNA sequence (same species):INSD:GGXP01036924.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 163 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 163 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
cholinergic receptor nicotinic alpha 7 subunit
neuronal acetylcholine receptor subunit alpha-7
transfer RNA cysteine (anticodon ACA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
calcium voltage-gated channel auxiliary subunit alpha2delta 3
voltage-dependent calcium channel subunit alpha-2/delta-3
leucine rich repeats and transmembrane domains 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
leucine-rich repeat and transmembrane domain-containing protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
COORDINATES: nucleotide motif:Rfam:12.0:RF00026
COORDINATES: nucleotide motif:Rfam:12.0:RF00004
ELKS/RAB6-interacting/CAST family member 2
inositol hexakisphosphate kinase 2, transcript variant X2
inositol hexakisphosphate kinase 2, transcript variant X3
inositol hexakisphosphate kinase 2, transcript variant X1
protein kinase cAMP-dependent type II regulatory subunit alpha
cAMP-dependent protein kinase type II-alpha regulatory subunit
transfer RNA lysine (anticodon UUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
cilia and flagella associated protein 100
cilia- and flagella-associated protein 100
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
ZXD family zinc finger C, transcript variant X1
ZXD family zinc finger C, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
XPC complex subunit, DNA damage recognition and repair factor
DNA repair protein complementing XP-C cells
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transmembrane protein 43, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transmembrane protein 43, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transfer RNA arginine (anticodon CCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
coiled-coil-helix-coiled-coil-helix domain containing 4
mitochondrial intermembrane space import and assembly protein 40
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
sodium- and chloride-dependent taurine transporter-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
glutamate receptor interacting protein 2, transcript variant X1
glutamate receptor interacting protein 2, transcript variant X4
glutamate receptor interacting protein 2, transcript variant X2
glutamate receptor interacting protein 2, transcript variant X3
glutamate receptor-interacting protein 2 isoform X4
glutamate receptor-interacting protein 2 isoform X1
glutamate receptor-interacting protein 2 isoform X2
glutamate receptor-interacting protein 2 isoform X3
coiled-coil domain-containing protein 174
FYVE, RhoGEF and PH domain containing 5, transcript variant X2
FYVE, RhoGEF and PH domain containing 5, transcript variant X1
FYVE, RhoGEF and PH domain-containing protein 5 isoform X1
FYVE, RhoGEF and PH domain-containing protein 5 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transfer RNA phenylalanine (anticodon GAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
nuclear receptor subfamily 2 group C member 2, transcript variant X8
nuclear receptor subfamily 2 group C member 2, transcript variant X2
nuclear receptor subfamily 2 group C member 2, transcript variant X4
nuclear receptor subfamily 2 group C member 2, transcript variant X10
nuclear receptor subfamily 2 group C member 2, transcript variant X7
nuclear receptor subfamily 2 group C member 2, transcript variant X1
nuclear receptor subfamily 2 group C member 2, transcript variant X3
nuclear receptor subfamily 2 group C member 2, transcript variant X9
nuclear receptor subfamily 2 group C member 2, transcript variant X5
nuclear receptor subfamily 2 group C member 2, transcript variant X6
nuclear receptor subfamily 2 group C member 2 isoform X3
nuclear receptor subfamily 2 group C member 2 isoform X2
nuclear receptor subfamily 2 group C member 2 isoform X1
nuclear receptor subfamily 2 group C member 2 isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
28S ribosomal protein S25, mitochondrial
similar to RNA sequence (same species):INSD:GGXP01009249.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 126 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 126 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
COORDINATES: nucleotide motif:Rfam:12.0:RF00015
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transmembrane and coiled-coil domain family 1
transmembrane and coiled-coil domains protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins
intraflagellar transport protein 122 homolog
methyl-CpG binding domain 4, DNA glycosylase
EF-hand calcium binding domain 12, transcript variant X2
EF-hand calcium binding domain 12, transcript variant X1
EF-hand calcium-binding domain-containing protein 12
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
cullin-associated NEDD8-dissociated protein 1-like
SEC13 homolog, nuclear pore and COPII coat complex component
similar to RNA sequence (same species):INSD:GGXP01005992.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 147 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 147 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
interleukin 1 receptor associated kinase 2
interleukin-1 receptor-associated kinase-like 2
zinc finger BED domain-containing protein 5-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
von Hippel-Lindau disease tumor suppressor
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
THUMP domain containing 3, transcript variant X2
THUMP domain containing 3, transcript variant X1
THUMP domain containing 3, transcript variant X3
SLIT-ROBO Rho GTPase activating protein 3, transcript variant X2
SLIT-ROBO Rho GTPase activating protein 3, transcript variant X1
SLIT-ROBO Rho GTPase-activating protein 3 isoform X2
SLIT-ROBO Rho GTPase-activating protein 3 isoform X1
tumor suppressor 2, mitochondrial calcium regulator
Ras association domain family member 1, transcript variant X1
Ras association domain family member 1, transcript variant X2
ras association domain-containing protein 1 isoform X1
ras association domain-containing protein 1 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
adenosine deaminase like, transcript variant X3
adenosine deaminase like, transcript variant X1
adenosine deaminase-like protein isoform X1
adenosine deaminase-like protein isoform X3
adenosine deaminase like, transcript variant X2
adenosine deaminase-like protein isoform X2
glutathione peroxidase 1-like, transcript variant X1
glutathione peroxidase 1-like, transcript variant X2
glutathione peroxidase 1-like isoform X1
glutathione peroxidase 1-like isoform X2
ETS domain-containing protein Elk-1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
ETS domain-containing protein Elk-1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
ETS domain-containing protein Elk-1-like
ubiquitin carboxyl-terminal hydrolase 4-like
COORDINATES: nucleotide motif:Rfam:12.0:RF01960
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
caseinolytic mitochondrial matrix peptidase chaperone subunit X, transcript variant X1
caseinolytic mitochondrial matrix peptidase chaperone subunit X, transcript variant X2
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X2
kelch repeat and BTB domain containing 13
kelch repeat and BTB domain-containing protein 13
RAS like family 12, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
RAS like family 12, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
ras-like protein family member 12 isoform X1
ras-like protein family member 12 isoform X2
solute carrier family 51 subunit beta, transcript variant X2
solute carrier family 51 subunit beta, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
organic solute transporter subunit beta isoform X2
organic solute transporter subunit beta isoform X1
mitochondrial methionyl-tRNA formyltransferase, transcript variant X3
methionyl-tRNA formyltransferase, mitochondrial isoform X3
mitochondrial methionyl-tRNA formyltransferase, transcript variant X2
mitochondrial methionyl-tRNA formyltransferase, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
mitochondrial methionyl-tRNA formyltransferase, transcript variant X1
methionyl-tRNA formyltransferase, mitochondrial isoform X1
methionyl-tRNA formyltransferase, mitochondrial isoform X2
methionyl-tRNA formyltransferase, mitochondrial isoform X4
mitochondrial methionyl-tRNA formyltransferase, transcript variant X5
methionyl-tRNA formyltransferase, mitochondrial isoform X5
uncharacterized protein HI_0077-like, transcript variant X2
uncharacterized protein HI_0077-like, transcript variant X1
uncharacterized protein LOC122807704 isoform X1
uncharacterized protein HI_0077-like isoform X2
SPG21 abhydrolase domain containing, maspardin
similar to RNA sequence (same species):INSD:GGXP01053657.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 93 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 63 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
ankyrin repeat and death domain containing 1A, transcript variant X2
ankyrin repeat and death domain containing 1A, transcript variant X1
ankyrin repeat and death domain-containing protein 1A isoform X1
ankyrin repeat and death domain-containing protein 1A isoform X2
pleckstrin homology domain containing O2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
pleckstrin homology domain-containing family O member 2
proprotein convertase subtilisin/kexin type 6
similar to RNA sequence (same species):INSD:GGXP01042714.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 218 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 218 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
small nuclear ribonucleoprotein polypeptide A', transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
small nuclear ribonucleoprotein polypeptide A', transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 19% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: leucine-rich repeat serine/threonine-protein kinase 1
aldehyde dehydrogenase 1 family member A3
aldehyde dehydrogenase family 1 member A3
ankyrin repeat and SOCS box containing 7, transcript variant X2
ankyrin repeat and SOCS box containing 7, transcript variant X1
Rho guanine nucleotide exchange factor 3, transcript variant X1
Rho guanine nucleotide exchange factor 3, transcript variant X3
rho guanine nucleotide exchange factor 3 isoform X1
rho guanine nucleotide exchange factor 3 isoform X3
Rho guanine nucleotide exchange factor 3, transcript variant X2
rho guanine nucleotide exchange factor 3 isoform X2
Rho guanine nucleotide exchange factor 3, transcript variant X4
rho guanine nucleotide exchange factor 3 isoform X4
Rho guanine nucleotide exchange factor 3, transcript variant X5
rho guanine nucleotide exchange factor 3 isoform X5
transcription activation suppressor, transcript variant X1
transcription activation suppressor, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcription activation suppressor, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcription activation suppressor, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcription activation suppressor, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcription activation suppressor, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
coiled-coil domain containing 66, transcript variant X2
coiled-coil domain containing 66, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
coiled-coil domain-containing protein 66 isoform X2
coiled-coil domain-containing protein 66 isoform X1
transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
myotubularin related protein 10, transcript variant X1
myotubularin related protein 10, transcript variant X2
myotubularin-related protein 10 isoform X2
myotubularin-related protein 10 isoform X1
transient receptor potential cation channel subfamily M member 1
cilia and flagella associated protein 299
cilia- and flagella-associated protein 299
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
proprotein convertase subtilisin/kexin type 5-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 71 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 Proteins
proline rich transmembrane protein 3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
proline rich transmembrane protein 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
proline rich transmembrane protein 3, transcript variant X1
proline-rich transmembrane protein 3 isoform X2
proline-rich transmembrane protein 3 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
similar to RNA sequence (same species):INSD:GGXP01011099.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 192 bases not found in genome assembly
coiled-coil domain-containing protein 71
transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
protein FAM162A-like, transcript variant X1
protein FAM162A-like, transcript variant X2
phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform-like, transcript variant X1
phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform-like isoform X1
phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform-like isoform X2
laminin subunit beta-1-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
laminin subunit beta-1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
laminin subunit beta-1-like, transcript variant X2
laminin subunit beta-1-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA valine (anticodon UAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
ubiquitin carboxyl-terminal hydrolase 19
sodium- and chloride-dependent creatine transporter 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 118 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
serine/threonine-protein kinase pim-3-like, transcript variant X1
serine/threonine-protein kinase pim-3-like isoform X1
serine/threonine-protein kinase pim-3-like, transcript variant X2
serine/threonine-protein kinase pim-3-like isoform X2
transcriptional regulator QRICH1 isoform X1
transcriptional regulator QRICH1 isoform X2
inosine monophosphate dehydrogenase 2, transcript variant X1
inosine monophosphate dehydrogenase 2, transcript variant X2
inosine-5'-monophosphate dehydrogenase 2 isoform X1
inosine-5'-monophosphate dehydrogenase 2 isoform X2
NADH:ubiquinone oxidoreductase complex assembly factor 3
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
DALR anticodon binding domain containing 3
DALR anticodon-binding domain-containing protein 3
WD repeat domain 6, transcript variant X1
WD repeat domain 6, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
ariadne RBR E3 ubiquitin protein ligase 2, transcript variant X3
ariadne RBR E3 ubiquitin protein ligase 2, transcript variant X1
ariadne RBR E3 ubiquitin protein ligase 2, transcript variant X2
E3 ubiquitin-protein ligase ARIH2 isoform X2
E3 ubiquitin-protein ligase ARIH2 isoform X1
rab GDP dissociation inhibitor beta-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC122807756, transcript variant X2
uncharacterized LOC122807756, transcript variant X4
uncharacterized LOC122807756, transcript variant X1
uncharacterized LOC122807756, transcript variant X3
uncharacterized protein LOC122807756 isoform X1
uncharacterized protein LOC122807756 isoform X2
mitochondrial carnitine/acylcarnitine carrier protein
ankyrin repeat and SOCS box containing 14, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
ankyrin repeat and SOCS box containing 14, transcript variant X2
ankyrin repeat and SOCS box protein 14 isoform X1
ankyrin repeat and SOCS box protein 14 isoform X2
ankyrin repeat and SOCS box containing 14, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ankyrin repeat and SOCS box protein 14 isoform X3
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1, transcript variant X2
adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1, transcript variant X1
DCC-interacting protein 13-alpha isoform X2
DCC-interacting protein 13-alpha isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
interleukin 17 receptor D, transcript variant X2
interleukin 17 receptor D, transcript variant X1
V-type proton ATPase subunit S1-like protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
similar to RNA sequence (same species):INSD:GGXP01070284.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 198 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 198 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
DENN domain containing 6A, transcript variant X1
DENN domain containing 6A, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
sarcolemma associated protein, transcript variant X10
sarcolemmal membrane-associated protein isoform X7
sarcolemma associated protein, transcript variant X1
sarcolemma associated protein, transcript variant X2
sarcolemma associated protein, transcript variant X4
sarcolemma associated protein, transcript variant X5
sarcolemma associated protein, transcript variant X3
sarcolemmal membrane-associated protein isoform X1
sarcolemmal membrane-associated protein isoform X2
sarcolemmal membrane-associated protein isoform X4
sarcolemmal membrane-associated protein isoform X5
sarcolemmal membrane-associated protein isoform X3
sarcolemma associated protein, transcript variant X7
sarcolemma associated protein, transcript variant X9
sarcolemma associated protein, transcript variant X6
sarcolemma associated protein, transcript variant X8
sarcolemmal membrane-associated protein isoform X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
abhydrolase domain containing 6, acylglycerol lipase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
hydroxyacyl-thioester dehydratase type 2
hydroxyacyl-thioester dehydratase type 2, mitochondrial
PX domain containing serine/threonine kinase like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
PX domain containing serine/threonine kinase like, transcript variant X2
PX domain containing serine/threonine kinase like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
PX domain containing serine/threonine kinase like, transcript variant X1
PX domain containing serine/threonine kinase like, transcript variant X3
PX domain-containing protein kinase-like protein isoform X1
PX domain-containing protein kinase-like protein isoform X2
PX domain-containing protein kinase-like protein isoform X3
PX domain-containing protein kinase-like protein isoform X4
pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like
potassium channel tetramerization domain containing 6, transcript variant X1
potassium channel tetramerization domain containing 6, transcript variant X2
BTB/POZ domain-containing protein KCTD6 isoform X1
BTB/POZ domain-containing protein KCTD6 isoform X2
potassium channel tetramerization domain containing 6, transcript variant X4
potassium channel tetramerization domain containing 6, transcript variant X3
BTB/POZ domain-containing protein KCTD6 isoform X3
potassium channel tetramerization domain containing 6, transcript variant X5
BTB/POZ domain-containing protein KCTD6 isoform X4
pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like, transcript variant X1
similar to RNA sequence (same species):INSD:GGXP01033051.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 316 bases not found in genome assembly
pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like, transcript variant X2
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 237 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like isoform X1
pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
family with sequence similarity 107 member A, transcript variant X1
family with sequence similarity 107 member A, transcript variant X2
actin-associated protein FAM107A isoform X1
actin-associated protein FAM107A isoform X2
FAM3 metabolism regulating signaling molecule D, transcript variant X3
FAM3 metabolism regulating signaling molecule D, transcript variant X1
FAM3 metabolism regulating signaling molecule D, transcript variant X2
similar to RNA sequence (same species):INSD:GGXP01013620.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 343 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 343 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
mitochondrial inner membrane protease ATP23 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
RNA polymerase II associated protein 3, transcript variant X2
RNA polymerase II associated protein 3, transcript variant X1
RNA polymerase II-associated protein 3 isoform X1
RNA polymerase II-associated protein 3 isoform X2
guanine nucleotide-binding protein subunit beta-5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
cAMP regulated phosphoprotein 19, transcript variant X1
cAMP regulated phosphoprotein 19, transcript variant X2
cAMP-regulated phosphoprotein 19 isoform X1
cAMP-regulated phosphoprotein 19 isoform X2
family with sequence similarity 214 member A
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
5'-aminolevulinate synthase 1, transcript variant X3
5-aminolevulinate synthase, nonspecific, mitochondrial isoform X3
5'-aminolevulinate synthase 1, transcript variant X5
5'-aminolevulinate synthase 1, transcript variant X4
5'-aminolevulinate synthase 1, transcript variant X1
5-aminolevulinate synthase, nonspecific, mitochondrial isoform X1
5'-aminolevulinate synthase 1, transcript variant X2
5-aminolevulinate synthase, nonspecific, mitochondrial isoform X2
5-aminolevulinate synthase, nonspecific, mitochondrial isoform X4
similar to RNA sequence (same species):INSD:GGXP01052135.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 176 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 176 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin-like modifier-activating enzyme 1, transcript variant X2
ubiquitin-like modifier-activating enzyme 1, transcript variant X1
ubiquitin-like modifier-activating enzyme 1 isoform X1
ubiquitin-like modifier-activating enzyme 1 isoform X2
inka box actin regulator 1, transcript variant X1
inka box actin regulator 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
putative uncharacterized protein DDB_G0286901
troponin C1, slow skeletal and cardiac type
troponin C, slow skeletal and cardiac muscles
ribosomal protein L29, transcript variant X1
ribosomal protein L29, transcript variant X2
ribosomal protein L29, transcript variant X3
ribosomal protein L29, transcript variant X4
guanine nucleotide-binding protein-like 3
COORDINATES: nucleotide motif:Rfam:12.0:RF00569
glycosyltransferase 8 domain containing 1
similar to RNA sequence (same species):INSD:GGXP01059899.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 113 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 113 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
glycosyltransferase 8 domain-containing protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
interferon related developmental regulator 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
interferon-related developmental regulator 2
5'-nucleotidase domain-containing protein 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
SAFB like transcription modulator, transcript variant X5
SAFB like transcription modulator, transcript variant X7
SAFB like transcription modulator, transcript variant X2
SAFB like transcription modulator, transcript variant X6
SAFB like transcription modulator, transcript variant X3
SAFB like transcription modulator, transcript variant X1
SAFB like transcription modulator, transcript variant X4
SAFB-like transcription modulator isoform X5
SAFB-like transcription modulator isoform X4
SAFB-like transcription modulator isoform X2
SAFB-like transcription modulator isoform X6
SAFB-like transcription modulator isoform X3
SAFB-like transcription modulator isoform X7
SAFB-like transcription modulator isoform X1
transfer RNA leucine (anticodon UAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
similar to RNA sequence (same species):INSD:GGXP01060855.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 36 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 36 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
ubiquitin carboxyl-terminal hydrolase MINDY-2
similar to RNA sequence (same species):INSD:GGXP01038747.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 151 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 151 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
disintegrin and metalloproteinase domain-containing protein 10
zinc finger protein 208-like, transcript variant X1
zinc finger protein 208-like, transcript variant X2
tetratricopeptide repeat protein 24-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
tetratricopeptide repeat protein 24-like, transcript variant X2
tetratricopeptide repeat protein 24-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
tetratricopeptide repeat protein 24-like isoform X3
tetratricopeptide repeat protein 24-like isoform X1
tetratricopeptide repeat protein 24-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
aldehyde dehydrogenase 1 family member A2
ATP synthase membrane subunit K, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
basic salivary proline-rich protein 3-like
musculoskeletal, embryonic nuclear protein 1
musculoskeletal embryonic nuclear protein 1
store-operated calcium entry regulator STIMATE-like, transcript variant X2
store-operated calcium entry regulator STIMATE-like, transcript variant X1
store-operated calcium entry regulator STIMATE-like isoform X2
store-operated calcium entry regulator STIMATE-like isoform X1
transfer RNA tryptophan (anticodon CCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
shisa family member 5, transcript variant X1
shisa family member 5, transcript variant X2
protein phosphatase, Mg2+/Mn2+ dependent 1M
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
stimulated by retinoic acid gene 6 protein-like
similar to RNA sequence (same species):INSD:GGXP01073850.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 164 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 164 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
inter-alpha-trypsin inhibitor heavy chain H3-like, transcript variant X5
inter-alpha-trypsin inhibitor heavy chain H3-like, transcript variant X4
inter-alpha-trypsin inhibitor heavy chain H3-like, transcript variant X3
inter-alpha-trypsin inhibitor heavy chain H3-like, transcript variant X2
inter-alpha-trypsin inhibitor heavy chain H3-like, transcript variant X1
inter-alpha-trypsin inhibitor heavy chain H3-like isoform X5
inter-alpha-trypsin inhibitor heavy chain H3-like isoform X4
inter-alpha-trypsin inhibitor heavy chain H3-like isoform X3
inter-alpha-trypsin inhibitor heavy chain H3-like isoform X2
inter-alpha-trypsin inhibitor heavy chain H3-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
BRCA1 associated protein 1, transcript variant X1
BRCA1 associated protein 1, transcript variant X2
ubiquitin carboxyl-terminal hydrolase BAP1 isoform X1
ubiquitin carboxyl-terminal hydrolase BAP1 isoform X2
similar to RNA sequence (same species):INSD:GGXP01024870.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 578 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 578 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
MON1 homolog A, secretory trafficking associated
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC122807838, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC122807838, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
coiled-coil domain-containing protein 1-like
caM kinase-like vesicle-associated protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC122807550, transcript variant X1
uncharacterized LOC122807550, transcript variant X3
uncharacterized LOC122807550, transcript variant X2
uncharacterized LOC122807550, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
ribosomal L24 domain containing 1, transcript variant X1
ribosomal L24 domain containing 1, transcript variant X2
probable ribosome biogenesis protein RLP24 isoform X2
probable ribosome biogenesis protein RLP24 isoform X1
RAB27A, member RAS oncogene family, transcript variant X5
RAB27A, member RAS oncogene family, transcript variant X1
RAB27A, member RAS oncogene family, transcript variant X6
RAB27A, member RAS oncogene family, transcript variant X3
RAB27A, member RAS oncogene family, transcript variant X4
RAB27A, member RAS oncogene family, transcript variant X2
PIGB opposite strand 1, transcript variant X3
PIGB opposite strand 1, transcript variant X1
PIGB opposite strand 1, transcript variant X2
phosphatidylinositol glycan anchor biosynthesis class B
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
cell cycle progression 1, transcript variant X1
cell cycle progression 1, transcript variant X3
cell cycle progression 1, transcript variant X2
cell cycle progression protein 1 isoform X2
cell cycle progression protein 1 isoform X1
cell cycle progression 1, transcript variant X4
cell cycle progression protein 1 isoform X3
dynein axonemal assembly factor 4, transcript variant X2
dynein axonemal assembly factor 4, transcript variant X1
dynein axonemal assembly factor 4, transcript variant X3
dynein axonemal assembly factor 4 isoform X2
dynein axonemal assembly factor 4 isoform X1
dynein axonemal assembly factor 4 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
zinc finger protein 280D, transcript variant X1
zinc finger protein 280D, transcript variant X3
zinc finger protein 280D, transcript variant X5
zinc finger protein 280D, transcript variant X4
zinc finger protein 280D, transcript variant X2
transcription factor 12, transcript variant X2
transcription factor 12, transcript variant X1
transcription factor 12, transcript variant X3
transcription factor 12, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins