Protopterus annectens isolate FY-2018-M chromosome 2.part2, PAN1.0, whole genome shotgun sequence.
Protopterus annectens (West African lungfish)
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Dipnomorpha; Ceratodontiformes; Lepidosirenoidei; Protopteridae; Protopterus.
African lungfish genome sheds light on the vertebrate water-to-land transition
REFSEQ INFORMATION: The reference sequence is identical to\nCM033078.1.\nAssembly name: PAN1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Northwestern Polytechnical\nUniversity on 2021/07/20. The original whole-genome shotgun project\nhas the accession JAGYFI000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Northwestern Polytechnical University\nAssembly Method :: wtdbg v. huge\nAssembly Name :: PAN1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 50.0x\nSequencing Technology :: Oxford Nanopore\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Protopterus annectens Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
3-hydroxy-3-methylglutaryl-CoA lyase, cytoplasmic-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00003
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
cholesterol 25-hydroxylase-like protein 2
COORDINATES: polyA evidence [ECO:0006239]
S100 calcium binding protein Z, transcript variant X1
S100 calcium binding protein Z, transcript variant X2
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA phenylalanine (anticodon GAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
corticotropin releasing hormone binding protein
corticotropin-releasing factor-binding protein
phosphodiesterase 8B, transcript variant X3
phosphodiesterase 8B, transcript variant X4
high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B isoform X3
high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B isoform X4
phosphodiesterase 8B, transcript variant X1
phosphodiesterase 8B, transcript variant X2
high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B isoform X1
high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B isoform X2
WD repeat domain 41, transcript variant X2
WD repeat domain 41, transcript variant X1
WD repeat domain 41, transcript variant X3
WD repeat-containing protein 41 isoform X1
WD repeat-containing protein 41 isoform X2
orthopedia homeobox, transcript variant X1
orthopedia homeobox, transcript variant X2
COORDINATES: nucleotide motif:Rfam:12.0:RF00015
adaptor related protein complex 3 subunit beta 1
transfer RNA glutamine (anticodon CUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
secretory carrier-associated membrane protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
LHFPL tetraspan subfamily member 2 protein
dimethylglycine dehydrogenase, mitochondrial
betaine--homocysteine S-methyltransferase 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
terminal nucleotidyltransferase 2, transcript variant X3
terminal nucleotidyltransferase 2, transcript variant X1
terminal nucleotidyltransferase 2, transcript variant X4
terminal nucleotidyltransferase 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
junction mediating and regulatory protein, p53 cofactor
junction-mediating and -regulatory protein
cyclin dependent kinase 7, transcript variant X1
cyclin dependent kinase 7, transcript variant X2
uncharacterized LOC122795530, transcript variant X1
uncharacterized LOC122795530, transcript variant X2
uncharacterized protein LOC122795530 isoform X1
uncharacterized protein LOC122795530 isoform X2
G2/mitotic-specific cyclin-B1 isoform X2
G2/mitotic-specific cyclin-B1 isoform X1
COORDINATES: nucleotide motif:Rfam:12.0:RF00002
TAR DNA-binding protein 43-like, transcript variant X2
TAR DNA-binding protein 43-like, transcript variant X1
TAR DNA-binding protein 43-like isoform X1
TAR DNA-binding protein 43-like isoform X2
phosphoinositide-3-kinase regulatory subunit 1, transcript variant X1
phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1
phosphoinositide-3-kinase regulatory subunit 1, transcript variant X2
phosphatidylinositol 3-kinase regulatory subunit alpha isoform X2
phosphoinositide-3-kinase regulatory subunit 1, transcript variant X4
phosphatidylinositol 3-kinase regulatory subunit alpha isoform X4
phosphoinositide-3-kinase regulatory subunit 1, transcript variant X3
phosphatidylinositol 3-kinase regulatory subunit alpha isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
microtubule-associated serine/threonine-protein kinase 4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
glucose-dependent insulinotropic receptor
COORDINATES: nucleotide motif:Rfam:12.0:RF00026
thioredoxin reductase-like selenoprotein T
eukaryotic translation initiation factor 2A
glutamate-cysteine ligase catalytic subunit
similar to RNA sequence (same species):INSD:GGXP01049480.1
annotated by transcript or proteomic data
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 105 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 105 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
glutamate--cysteine ligase catalytic subunit
ELOVL fatty acid elongase 5, transcript variant X2
ELOVL fatty acid elongase 5, transcript variant X1
ELOVL fatty acid elongase 5, transcript variant X3
elongation of very long chain fatty acids protein 5
probable ATP-dependent RNA helicase DDX4
COORDINATES: nucleotide motif:Rfam:12.0:RF00619
muscular LMNA interacting protein, transcript variant X12
muscular LMNA interacting protein, transcript variant X5
muscular LMNA interacting protein, transcript variant X6
muscular LMNA interacting protein, transcript variant X3
muscular LMNA interacting protein, transcript variant X4
muscular LMNA interacting protein, transcript variant X1
muscular LMNA interacting protein, transcript variant X7
muscular LMNA interacting protein, transcript variant X2
muscular LMNA interacting protein, transcript variant X11
muscular LMNA interacting protein, transcript variant X10
muscular LMNA-interacting protein isoform X5
muscular LMNA-interacting protein isoform X6
muscular LMNA-interacting protein isoform X11
muscular LMNA-interacting protein isoform X3
muscular LMNA-interacting protein isoform X4
muscular LMNA-interacting protein isoform X1
muscular LMNA-interacting protein isoform X7
muscular LMNA-interacting protein isoform X2
muscular LMNA-interacting protein isoform X10
muscular LMNA interacting protein, transcript variant X8
muscular LMNA interacting protein, transcript variant X9
muscular LMNA-interacting protein isoform X9
muscular LMNA-interacting protein isoform X8
leucine-rich repeat-containing protein 1
fucosyltransferase 9, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
fucosyltransferase 9, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA histidin (anticodon AUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
interleukin-31 receptor subunit alpha-like
interleukin 6 cytokine family signal transducer, transcript variant X5
interleukin 6 cytokine family signal transducer, transcript variant X1
interleukin 6 cytokine family signal transducer, transcript variant X2
interleukin 6 cytokine family signal transducer, transcript variant X4
interleukin 6 cytokine family signal transducer, transcript variant X3
interleukin-6 receptor subunit beta isoform X3
interleukin-6 receptor subunit beta isoform X1
interleukin-6 receptor subunit beta isoform X2
COORDINATES: nucleotide motif:Rfam:12.0:RF00278
interleukin-6 receptor subunit beta-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
ankyrin repeat domain 55, transcript variant X2
ankyrin repeat domain 55, transcript variant X1
ankyrin repeat domain-containing protein 55 isoform X2
ankyrin repeat domain-containing protein 55 isoform X1
mitogen-activated protein kinase kinase kinase 1
SET domain containing 9, transcript variant X4
SET domain containing 9, transcript variant X3
SET domain containing 9, transcript variant X2
SET domain containing 9, transcript variant X1
SET domain containing 9, transcript variant X6
SET domain containing 9, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
SET domain-containing protein 9 isoform X1
SET domain-containing protein 9 isoform X3
SET domain-containing protein 9 isoform X2
MIER family member 3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
MIER family member 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
MIER family member 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
mesoderm induction early response protein 3 isoform X2
mesoderm induction early response protein 3 isoform X1
normal mucosa of esophagus-specific gene 1 protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
ATP synthase subunit C lysine N-methyltransferase-like, transcript variant X2
ATP synthase subunit C lysine N-methyltransferase-like, transcript variant X1
ATP synthase subunit C lysine N-methyltransferase-like isoform X2
ATP synthase subunit C lysine N-methyltransferase-like isoform X1
RAB3C, member RAS oncogene family, transcript variant X2
RAB3C, member RAS oncogene family, transcript variant X1
phosphodiesterase 4D, transcript variant X1
phosphodiesterase 4D, transcript variant X2
phosphodiesterase 4D, transcript variant X3
cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X1
cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X2
cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X3
ELOVL fatty acid elongase 7, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
ELOVL fatty acid elongase 7, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
elongation of very long chain fatty acids protein 7 isoform X1
ELOVL fatty acid elongase 7, transcript variant X3
elongation of very long chain fatty acids protein 7 isoform X2
transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
ERCC excision repair 8, CSA ubiquitin ligase complex subunit
NADH:ubiquinone oxidoreductase complex assembly factor 2
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2
zinc finger SWIM domain-containing protein 6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
DIM1 rRNA methyltransferase and ribosome maturation factor, transcript variant X3
DIM1 rRNA methyltransferase and ribosome maturation factor, transcript variant X2
DIM1 rRNA methyltransferase and ribosome maturation factor, transcript variant X1
DIM1 rRNA methyltransferase and ribosome maturation factor, transcript variant X4
probable dimethyladenosine transferase isoform X3
probable dimethyladenosine transferase isoform X1
probable dimethyladenosine transferase isoform X2
similar to RNA sequence (same species):INSD:GGXP01070822.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 102 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 102 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
leucine-rich repeat-containing protein 70
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 12% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
metallophosphoesterase domain-containing protein 1-like, transcript variant X1
metallophosphoesterase domain-containing protein 1-like isoform X1
metallophosphoesterase domain-containing protein 1-like, transcript variant X2
metallophosphoesterase domain-containing protein 1-like isoform X2
uncharacterized LOC122795581, transcript variant X1
uncharacterized LOC122795581, transcript variant X2
uncharacterized protein LOC122795581 isoform X1
uncharacterized protein LOC122795581 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
gastrula zinc finger protein XlCGF57.1-like, transcript variant X1
gastrula zinc finger protein XlCGF57.1-like, transcript variant X2
gastrula zinc finger protein XlCGF57.1-like
uncharacterized LOC122795586, transcript variant X1
uncharacterized LOC122795586, transcript variant X4
uncharacterized LOC122795586, transcript variant X3
uncharacterized LOC122795586, transcript variant X2
uncharacterized LOC122795586, transcript variant X5
transfer RNA arginine (anticodon UCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA arginine (anticodon CCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
apolipoprotein L3-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
apolipoprotein L3-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
apolipoprotein L3-like, transcript variant X1
zinc finger protein 239-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
zinc finger protein 239-like, transcript variant X1
zinc finger protein 239-like, transcript variant X2
zinc finger protein 501-like, transcript variant X2
zinc finger protein 501-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
zinc finger protein 501-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
gastrula zinc finger protein XlCGF64.1-like isoform X3
uncharacterized LOC122795592, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
uncharacterized LOC122795592, transcript variant X3
uncharacterized LOC122795592, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
protein tyrosine phosphatase 4A1, transcript variant X1
protein tyrosine phosphatase 4A1, transcript variant X2
PHD finger protein 3, transcript variant X1
PHD finger protein 3, transcript variant X2
PHD finger protein 3, transcript variant X3
transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
regulator of G protein signaling 7 binding protein, transcript variant X1
regulator of G protein signaling 7 binding protein, transcript variant X2
regulator of G-protein signaling 7-binding protein isoform X1
regulator of G-protein signaling 7-binding protein isoform X2
trifunctional nucleotide phosphoesterase protein YfkN-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: 5'-3' exonuclease PLD3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
C3a anaphylatoxin chemotactic receptor-like, transcript variant X2
C3a anaphylatoxin chemotactic receptor-like, transcript variant X1
C3a anaphylatoxin chemotactic receptor-like
zona pellucida sperm-binding protein 3-like, transcript variant X1
zona pellucida sperm-binding protein 3-like, transcript variant X2
zona pellucida sperm-binding protein 3-like isoform X1
zona pellucida sperm-binding protein 3-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
family with sequence similarity 83 member B
transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:12.0:RF00001
transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
repulsive guidance molecule BMP co-receptor b, transcript variant X2
repulsive guidance molecule B isoform X2
repulsive guidance molecule BMP co-receptor b, transcript variant X1
repulsive guidance molecule B isoform X1
chromodomain helicase DNA binding protein 1
similar to RNA sequence (same species):INSD:GGXP01038763.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 163 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 163 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
chromodomain-helicase-DNA-binding protein 1
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
CMP-N-acetylneuraminate-poly-alpha-2, 8-sialyltransferase
family with sequence similarity 174 member A, transcript variant X1
family with sequence similarity 174 member A, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: nucleotide motif:Rfam:12.0:RF02543
COORDINATES: nucleotide motif:Rfam:12.0:RF00004
solute carrier organic anion transporter family member 4C1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
solute carrier organic anion transporter family member 4C1, transcript variant X1
solute carrier organic anion transporter family member 4C1
peptidylglycine alpha-amidating monooxygenase
peptidyl-glycine alpha-amidating monooxygenase
diphosphoinositol pentakisphosphate kinase 2
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
coiled-coil domain-containing protein 125
adenylate kinase 6, transcript variant X1
adenylate kinase 6, transcript variant X3
adenylate kinase 6, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
GTF2H2 family member C, transcript variant X1
general transcription factor IIH subunit 2-like protein isoform X1
GTF2H2 family member C, transcript variant X2
general transcription factor IIH subunit 2-like protein isoform X2
small integral membrane protein 15, transcript variant X1
small integral membrane protein 15, transcript variant X2
baculoviral IAP repeat-containing protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
baculoviral IAP repeat-containing protein 1f-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments
lysosomal cobalamin transport escort protein LMBD1
similar to RNA sequence (same species):INSD:GGXP01032444.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 25 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 25 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC122795627, transcript variant X1
uncharacterized LOC122795627, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: molybdopterin synthase sulfur carrier subunit
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
beta-1,3-glucuronyltransferase 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
beta-1,3-glucuronyltransferase 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2 isoform X1
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2 isoform X2
family with sequence similarity 135 member A
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
NADH:ubiquinone oxidoreductase subunit S4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
ADP ribosylation factor like GTPase 15, transcript variant X2
ADP ribosylation factor like GTPase 15, transcript variant X1
ADP-ribosylation factor-like protein 15 isoform X2
ADP-ribosylation factor-like protein 15 isoform X1
heat shock protein family B (small) member 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 21% coverage of the annotated genomic feature by RNAseq alignments
cell division cycle protein 20 homolog B
multiciliate differentiation and DNA synthesis associated cell cycle protein, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
multiciliate differentiation and DNA synthesis associated cell cycle protein, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transfer RNA valine (anticodon UAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
solute carrier family 38 member 9, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
solute carrier family 38 member 9, transcript variant X2
solute carrier family 38 member 9, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
solute carrier family 38 member 9, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
solute carrier family 38 member 9, transcript variant X4
sodium-coupled neutral amino acid transporter 9
phospholipid phosphatase 1, transcript variant X3
phospholipid phosphatase 1, transcript variant X2
phospholipid phosphatase 1, transcript variant X1
transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
baculoviral IAP repeat-containing protein 1e-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
baculoviral IAP repeat-containing protein 1b-like, transcript variant X2
baculoviral IAP repeat-containing protein 1b-like, transcript variant X1
baculoviral IAP repeat-containing protein 1b-like isoform X2
baculoviral IAP repeat-containing protein 1b-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcription factor TFIIIB component B'' homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 64% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72% coverage of the annotated genomic feature by RNAseq alignments
methylcrotonyl-CoA carboxylase subunit 2
methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
cocaine- and amphetamine-regulated transcript protein
28S ribosomal protein S27, mitochondrial
pentatricopeptide repeat-containing protein 2, mitochondrial
zinc finger protein 366, transcript variant X3
zinc finger protein 366, transcript variant X1
zinc finger protein 366, transcript variant X2
FCH and mu domain containing endocytic adaptor 2, transcript variant X1
FCH and mu domain containing endocytic adaptor 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Rho guanine nucleotide exchange factor 28, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Rho guanine nucleotide exchange factor 28, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Rho guanine nucleotide exchange factor 28, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Rho guanine nucleotide exchange factor 28, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
rho guanine nucleotide exchange factor 28 isoform X1
rho guanine nucleotide exchange factor 28 isoform X3
rho guanine nucleotide exchange factor 28 isoform X2
rho guanine nucleotide exchange factor 28 isoform X4
UTP15 small subunit processome component
U3 small nucleolar RNA-associated protein 15 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
similar to RNA sequence (same species):INSD:GGXP01026941.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 196 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 196 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
GTP dependent ribosome recycling factor mitochondrial 2
LOW QUALITY PROTEIN: ribosome-releasing factor 2, mitochondrial
transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
ribosome biogenesis protein NSA2 homolog
family with sequence similarity 169 member A
soluble lamin-associated protein of 75 kDa
glucosaminyl (N-acetyl) transferase 4, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
glucosaminyl (N-acetyl) transferase 4, transcript variant X2
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4
uncharacterized LOC122796025, transcript variant X1
uncharacterized LOC122796025, transcript variant X2
soluble lamin-associated protein of 75 kDa-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86% coverage of the annotated genomic feature by RNAseq alignments
ankyrin repeat domain-containing protein 31
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
3-hydroxy-3-methylglutaryl-CoA reductase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
3-hydroxy-3-methylglutaryl-Coenzyme A reductase
ceramide transporter 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
ceramide transporter 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
ankyrin repeat and death domain containing 1B, transcript variant X2
ankyrin repeat and death domain-containing protein 1B isoform X2
ankyrin repeat and death domain containing 1B, transcript variant X1
ankyrin repeat and death domain-containing protein 1B isoform X1
POC5 centriolar protein, transcript variant X2
POC5 centriolar protein, transcript variant X3
POC5 centriolar protein, transcript variant X1
IQ motif containing GTPase activating protein 2
similar to RNA sequence (same species):INSD:GGXP01029123.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 164 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 164 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
ras GTPase-activating-like protein IQGAP2
coagulation factor II thrombin receptor like 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
coagulation factor II thrombin receptor, transcript variant X2
coagulation factor II thrombin receptor, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
coagulation factor II thrombin receptor, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
proteinase-activated receptor 1 isoform X3
proteinase-activated receptor 1 isoform X2
proteinase-activated receptor 1 isoform X1
exocyst complex component 6B, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
exocyst complex component 6B, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
endoplasmic reticulum resident protein 29-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37% coverage of the annotated genomic feature by RNAseq alignments
AUP1 lipid droplet regulating VLDL assembly factor
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
lipid droplet-regulating VLDL assembly factor AUP1
lysyl oxidase like 3, transcript variant X2
lysyl oxidase like 3, transcript variant X1
lysyl oxidase like 3, transcript variant X3
coiled-coil domain-containing protein 166-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
similar to RNA sequence (same species):INSD:GGXP01055318.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 147 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 147 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
28S ribosomal protein S26, mitochondrial
uncharacterized LOC122795691, transcript variant X1
uncharacterized LOC122795691, transcript variant X2
uncharacterized protein LOC122795691 isoform X1
uncharacterized protein LOC122795691 isoform X2
threonine--tRNA ligase 1, cytoplasmic-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
methyltransferase like 9, transcript variant X1
methyltransferase like 9, transcript variant X2
COORDINATES: nucleotide motif:Rfam:12.0:RF00428
protein-L-histidine N-pros-methyltransferase
isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta, transcript variant X2
isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta, transcript variant X1
isocitrate dehydrogenase [NAD] subunit beta, mitochondrial isoform X2
isocitrate dehydrogenase [NAD] subunit beta, mitochondrial isoform X1
NOP56 ribonucleoprotein, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
NOP56 ribonucleoprotein, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
COORDINATES: nucleotide motif:Rfam:12.0:RF00274
COORDINATES: nucleotide motif:Rfam:12.0:RF00275
COORDINATES: nucleotide motif:Rfam:12.0:RF00432
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
tRNA N(3)-methylcytidine methyltransferase METTL6
rho-related BTB domain-containing protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC122795706, transcript variant X1
uncharacterized LOC122795706, transcript variant X3
uncharacterized LOC122795706, transcript variant X2
uncharacterized LOC122795706, transcript variant X4
uncharacterized protein LOC122795706 isoform X1
uncharacterized protein LOC122795706 isoform X3
uncharacterized protein LOC122795706 isoform X2
uncharacterized protein LOC122795706 isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
30S ribosomal protein 2, chloroplastic-like
mannosyl-oligosaccharide glucosidase, transcript variant X3
mannosyl-oligosaccharide glucosidase, transcript variant X1
mannosyl-oligosaccharide glucosidase, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
POU domain, class 4, transcription factor 3
RNA binding motif protein 27, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
RNA binding motif protein 27, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
SH3 domain containing ring finger 2, transcript variant X2
SH3 domain containing ring finger 2, transcript variant X1
E3 ubiquitin-protein ligase SH3RF2 isoform X2
E3 ubiquitin-protein ligase SH3RF2 isoform X1
COORDINATES: nucleotide motif:Rfam:12.0:RF00020
glutaredoxin and cysteine rich domain containing 2
glutaredoxin domain-containing cysteine-rich protein 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
placental growth factor, transcript variant X1
similar to RNA sequence (same species):INSD:GGXP01052105.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 63 bases not found in genome assembly
placental growth factor, transcript variant X2
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 63 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
transfer RNA glycine (anticodon CCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
ribosomal protein S6 kinase like 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
ribosomal protein S6 kinase like 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial
prospero homeobox protein 1-like, transcript variant X1
prospero homeobox protein 1-like, transcript variant X2
prospero homeobox protein 1-like isoform X1
prospero homeobox protein 1-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
homeobox protein not2-like, transcript variant X1
homeobox protein not2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
SET and MYND domain-containing protein 5
protease-associated domain-containing protein 1
chaperonin containing TCP1 subunit 7, transcript variant X1
T-complex protein 1 subunit eta isoform X1
chaperonin containing TCP1 subunit 7, transcript variant X2
T-complex protein 1 subunit eta isoform X2
BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like
transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
matrix metalloproteinase-21-like, transcript variant X1
matrix metalloproteinase-21-like, transcript variant X2
matrix metalloproteinase-21-like isoform X1
matrix metalloproteinase-21-like isoform X2
kazal-type serine protease inhibitor domain-containing protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 255 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
V-type proton ATPase subunit B, kidney isoform
ankyrin repeat domain-containing protein 53-like, transcript variant X1
ankyrin repeat domain-containing protein 53-like, transcript variant X2
ankyrin repeat domain-containing protein 53-like
heat shock protein family A (Hsp70) member 12B, transcript variant X1
heat shock protein family A (Hsp70) member 12B, transcript variant X2
chromosome chr2.part2 C20orf27 homolog, transcript variant X1
chromosome chr2.part2 C20orf27 homolog, transcript variant X2
disintegrin and metalloproteinase domain-containing protein 33
cell division cycle 25B, transcript variant X1
cell division cycle 25B, transcript variant X2
M-phase inducer phosphatase 2 isoform X1
M-phase inducer phosphatase 2 isoform X2
adaptor related protein complex 5 subunit sigma 1, transcript variant X2
adaptor related protein complex 5 subunit sigma 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
solute carrier family 4 member 11, transcript variant X1
solute carrier family 4 member 11, transcript variant X2
solute carrier family 4 member 11, transcript variant X3
sodium bicarbonate transporter-like protein 11 isoform X1
sodium bicarbonate transporter-like protein 11 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
DELTA-thalatoxin-Avl1a-like, transcript variant X2
DELTA-thalatoxin-Avl1a-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
leucine zipper tumor suppressor family member 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
leucine zipper tumor suppressor family member 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
leucine zipper tumor suppressor family member 3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
leucine zipper putative tumor suppressor 3
FAST kinase domains 5, transcript variant X1
U-box domain containing 5, transcript variant X1
U-box domain containing 5, transcript variant X3
FAST kinase domains 5, transcript variant X2
FAST kinase domain-containing protein 5, mitochondrial
U-box domain containing 5, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: oxytocin-neurophysin 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
protein tyrosine phosphatase receptor type A
similar to RNA sequence (same species):INSD:GGXP01020598.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 213 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 213 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
receptor-type tyrosine-protein phosphatase alpha
1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon-like
transmembrane protein 14A-like, transcript variant X1
transmembrane protein 14A-like, transcript variant X2
endoplasmic reticulum aminopeptidase 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
endoplasmic reticulum aminopeptidase 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
proprotein convertase subtilisin/kexin type 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
elongation factor for RNA polymerase II 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
RNA polymerase II elongation factor ELL2
Rieske Fe-S domain containing, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
Rieske Fe-S domain containing, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
cytochrome c oxidase assembly factor 4 homolog, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
family with sequence similarity 81 member B
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
multiple C2 and transmembrane domain containing 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
multiple C2 and transmembrane domain containing 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
multiple C2 and transmembrane domain-containing protein 1 isoform X2
multiple C2 and transmembrane domain-containing protein 1 isoform X1
SMC5-SMC6 complex localization factor protein 1
uncharacterized protein KIAA0825 homolog
family with sequence similarity 172 member A
nuclear receptor subfamily 2 group F member 1, transcript variant X2
nuclear receptor subfamily 2 group F member 1, transcript variant X1
nuclear receptor subfamily 2 group F member 1, transcript variant X3
uncharacterized LOC122795801, transcript variant X3
uncharacterized LOC122795801, transcript variant X4
uncharacterized LOC122795801, transcript variant X2
uncharacterized LOC122795801, transcript variant X1
uncharacterized LOC122795801, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
arrestin domain-containing protein 3-like, transcript variant X1
arrestin domain-containing protein 3-like, transcript variant X2
arrestin domain-containing protein 3-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
EGF like repeats and discoidin domains 3
EGF-like repeat and discoidin I-like domain-containing protein 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
cytochrome c oxidase subunit 7C, mitochondrial, transcript variant X2
cytochrome c oxidase subunit 7C, mitochondrial, transcript variant X1
cytochrome c oxidase subunit 7C, mitochondrial
COORDINATES: nucleotide motif:Rfam:12.0:RF00341
transmembrane protein 161B, transcript variant X2
transmembrane protein 161B, transcript variant X1
myocyte enhancer factor 2C, transcript variant X4
myocyte enhancer factor 2C, transcript variant X9
myocyte enhancer factor 2C, transcript variant X10
myocyte enhancer factor 2C, transcript variant X1
myocyte enhancer factor 2C, transcript variant X14
myocyte enhancer factor 2C, transcript variant X7
myocyte enhancer factor 2C, transcript variant X12
myocyte enhancer factor 2C, transcript variant X11
myocyte enhancer factor 2C, transcript variant X8
myocyte enhancer factor 2C, transcript variant X16
myocyte enhancer factor 2C, transcript variant X13
myocyte enhancer factor 2C, transcript variant X15
myocyte enhancer factor 2C, transcript variant X17
myocyte enhancer factor 2C, transcript variant X2
myocyte enhancer factor 2C, transcript variant X6
myocyte enhancer factor 2C, transcript variant X5
myocyte enhancer factor 2C, transcript variant X3
myocyte-specific enhancer factor 2C isoform X11
myocyte-specific enhancer factor 2C isoform X9
myocyte-specific enhancer factor 2C isoform X4
myocyte-specific enhancer factor 2C isoform X7
myocyte-specific enhancer factor 2C isoform X6
myocyte-specific enhancer factor 2C isoform X5
myocyte-specific enhancer factor 2C isoform X2
myocyte-specific enhancer factor 2C isoform X1
myocyte-specific enhancer factor 2C isoform X12
myocyte-specific enhancer factor 2C isoform X10
myocyte-specific enhancer factor 2C isoform X8
myocyte-specific enhancer factor 2C isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
metallo-beta-lactamase domain containing 2
metallo-beta-lactamase domain-containing protein 2
RNA polymerase III subunit G, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
RNA polymerase III subunit G, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
DNA-directed RNA polymerase III subunit RPC7 isoform X1
DNA-directed RNA polymerase III subunit RPC7 isoform X2
lysM and putative peptidoglycan-binding domain-containing protein 3
transfer RNA glutamine (anticodon UUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA serine (anticodon UGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transfer RNA serine (anticodon GGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
poly(A)-specific ribonuclease PNLDC1-like
death associated protein kinase 1, transcript variant X2
death associated protein kinase 1, transcript variant X1
transfer RNA serine (anticodon ACU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA serine (anticodon GCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
iron-sulfur cluster assembly 1 homolog, mitochondrial
terminal uridylyl transferase 7, transcript variant X2
terminal uridylyl transferase 7, transcript variant X1
terminal uridylyltransferase 7 isoform X2
terminal uridylyltransferase 7 isoform X1
COORDINATES: nucleotide motif:Rfam:12.0:RF00396
uncharacterized LOC122795832, transcript variant X1
uncharacterized LOC122795832, transcript variant X2
StAR related lipid transfer domain containing 4, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
StAR related lipid transfer domain containing 4, transcript variant X3
StAR related lipid transfer domain containing 4, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
StAR related lipid transfer domain containing 4, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
StAR related lipid transfer domain containing 4, transcript variant X4
StAR related lipid transfer domain containing 4, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
erythrocyte membrane protein band 4.1 like 4A
APC regulator of WNT signaling pathway, transcript variant X2
APC regulator of WNT signaling pathway, transcript variant X1
APC regulator of WNT signaling pathway, transcript variant X6
APC regulator of WNT signaling pathway, transcript variant X3
APC regulator of WNT signaling pathway, transcript variant X4
APC regulator of WNT signaling pathway, transcript variant X5
adenomatous polyposis coli protein isoform X1
adenomatous polyposis coli protein isoform X2
APC regulator of WNT signaling pathway, transcript variant X7
adenomatous polyposis coli protein isoform X3
signal recognition particle 19 kDa protein
similar to RNA sequence (same species):INSD:GGXP01010417.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 374 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 374 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
MCC regulator of WNT signaling pathway, transcript variant X2
MCC regulator of WNT signaling pathway, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
colorectal mutant cancer protein isoform X1
colorectal mutant cancer protein isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
cryptic protein-like, transcript variant X2
cryptic protein-like, transcript variant X1
leucine rich repeat containing 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
leucine rich repeat containing 2, transcript variant X1
leucine-rich repeat-containing protein 2 isoform X1
leucine-rich repeat-containing protein 2 isoform X2
putative uncharacterized protein DDB_G0283051
spindle assembly abnormal protein 6 homolog, transcript variant X1
spindle assembly abnormal protein 6 homolog, transcript variant X3
spindle assembly abnormal protein 6 homolog, transcript variant X2
spindle assembly abnormal protein 6 homolog isoform X1
spindle assembly abnormal protein 6 homolog isoform X3
spindle assembly abnormal protein 6 homolog isoform X2
zinc finger FYVE-type containing 16, transcript variant X7
zinc finger FYVE-type containing 16, transcript variant X1
zinc finger FYVE-type containing 16, transcript variant X6
zinc finger FYVE-type containing 16, transcript variant X4
zinc finger FYVE-type containing 16, transcript variant X5
zinc finger FYVE-type containing 16, transcript variant X8
zinc finger FYVE-type containing 16, transcript variant X2
zinc finger FYVE-type containing 16, transcript variant X3
zinc finger FYVE domain-containing protein 16 isoform X1
zinc finger FYVE domain-containing protein 16 isoform X3
zinc finger FYVE domain-containing protein 16 isoform X2
zinc finger FYVE domain-containing protein 16 isoform X4
family with sequence similarity 151 member B, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
family with sequence similarity 151 member B, transcript variant X1
ankyrin repeat domain-containing protein 34B
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Ras protein specific guanine nucleotide releasing factor 2
ras-specific guanine nucleotide-releasing factor 2
acyl-CoA thioesterase 12, transcript variant X2
acyl-CoA thioesterase 12, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
acetyl-coenzyme A thioesterase isoform X2
acetyl-coenzyme A thioesterase isoform X1
single stranded DNA binding protein 2, transcript variant X1
single stranded DNA binding protein 2, transcript variant X2
single stranded DNA binding protein 2, transcript variant X3
single-stranded DNA-binding protein 2 isoform X2
single-stranded DNA-binding protein 2 isoform X1
single-stranded DNA-binding protein 2 isoform X3
single stranded DNA binding protein 2, transcript variant X4
single-stranded DNA-binding protein 2 isoform X4
autophagy related 10, transcript variant X4
autophagy related 10, transcript variant X6
autophagy related 10, transcript variant X3
autophagy related 10, transcript variant X7
autophagy related 10, transcript variant X1
autophagy related 10, transcript variant X5
autophagy related 10, transcript variant X2
autophagy related 10, transcript variant X8
ubiquitin-like-conjugating enzyme ATG10 isoform X1
ubiquitin-like-conjugating enzyme ATG10 isoform X3
ubiquitin-like-conjugating enzyme ATG10 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
X-ray repair cross complementing 4, transcript variant X1
X-ray repair cross complementing 4, transcript variant X2
mediator of RNA polymerase II transcription subunit 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69% coverage of the annotated genomic feature by RNAseq alignments
hyaluronan and proteoglycan link protein 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
hyaluronan and proteoglycan link protein 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
hyaluronan and proteoglycan link protein 1, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
hyaluronan and proteoglycan link protein 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
hyaluronan and proteoglycan link protein 1 isoform X1
hyaluronan and proteoglycan link protein 1 isoform X2
calcium/calmodulin dependent protein kinase IV
calcium/calmodulin-dependent protein kinase type IV
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transmembrane protein 232, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transmembrane protein 232, transcript variant X3
transmembrane protein 232, transcript variant X1
similar to RNA sequence (same species):INSD:GGXP01048438.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 145 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 145 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
praja ring finger ubiquitin ligase 2, transcript variant X2
praja ring finger ubiquitin ligase 2, transcript variant X3
praja ring finger ubiquitin ligase 2, transcript variant X1
E3 ubiquitin-protein ligase Praja-2 isoform X1
E3 ubiquitin-protein ligase Praja-2 isoform X2
E3 ubiquitin-protein ligase Praja-2 isoform X3
similar to RNA sequence (same species):INSD:GGXP01050089.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 174 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 174 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
F-box and leucine rich repeat protein 17
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized protein DDB_G0271670-like
hippocampus abundant transcript 1 protein-like, transcript variant X1
similar to RNA sequence (same species):INSD:GGXP01034885.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 128 bases not found in genome assembly
hippocampus abundant transcript 1 protein-like, transcript variant X2
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 128 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
hippocampus abundant transcript 1 protein-like isoform X2
hippocampus abundant transcript 1 protein-like isoform X1
leucine-zipper-like transcriptional regulator 1, transcript variant X1
leucine-zipper-like transcriptional regulator 1, transcript variant X2
leucine-zipper-like transcriptional regulator 1 isoform X1
acyl-CoA-binding domain-containing protein 6-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
phosphate carrier protein, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
polycomb group ring finger 1, transcript variant X1
polycomb group RING finger protein 1 isoform X1
polycomb group ring finger 1, transcript variant X2
polycomb group RING finger protein 1 isoform X2
THAP domain containing 1, transcript variant X2
THAP domain containing 1, transcript variant X1
THAP domain-containing protein 1 isoform X1
THAP domain-containing protein 1 isoform X2
coiled-coil domain-containing protein 17-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 127 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
YTH domain containing 1, transcript variant X4
YTH domain containing 1, transcript variant X2
YTH domain containing 1, transcript variant X3
YTH domain containing 1, transcript variant X1
YTH domain-containing protein 1 isoform X4
YTH domain-containing protein 1 isoform X2
YTH domain-containing protein 1 isoform X3
YTH domain-containing protein 1 isoform X1
clathrin light chain A-like, transcript variant X1
clathrin light chain A-like, transcript variant X2
glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
CDC28 protein kinase regulatory subunit 2
cyclin-dependent kinases regulatory subunit 2
selenocysteine insertion sequence-binding protein 2
diphthine methyltransferase-like, transcript variant X2
diphthine methyltransferase-like, transcript variant X1
diphthine methyltransferase-like isoform X2
diphthine methyltransferase-like isoform X1
mitochondrial ribosomal protein L41, transcript variant X2
mitochondrial ribosomal protein L41, transcript variant X1
39S ribosomal protein L41, mitochondrial
patatin like phospholipase domain containing 7
similar to RNA sequence (same species):INSD:GGXP01024781.1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 142 bases not found in genome assembly
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 127 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
patatin-like phospholipase domain-containing protein 7
potassium voltage-gated channel subfamily V member 2-like, transcript variant X2
potassium voltage-gated channel subfamily V member 2-like, transcript variant X3
potassium voltage-gated channel subfamily V member 2-like, transcript variant X4
potassium voltage-gated channel subfamily V member 2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
potassium voltage-gated channel subfamily V member 2-like
transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
KN motif and ankyrin repeat domains 1, transcript variant X3
KN motif and ankyrin repeat domains 1, transcript variant X1
KN motif and ankyrin repeat domains 1, transcript variant X2
KN motif and ankyrin repeat domain-containing protein 1 isoform X2
KN motif and ankyrin repeat domain-containing protein 1 isoform X1
COORDINATES: nucleotide motif:Rfam:12.0:RF00066
COBW domain containing 3, transcript variant X2
COBW domain containing 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: nucleotide motif:Rfam:12.0:RF00560
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
unc-45 myosin chaperone B, transcript variant X1
unc-45 myosin chaperone B, transcript variant X2
phosphatidylinositol-4-phosphate 5-kinase type 1 beta, transcript variant X4
phosphatidylinositol-4-phosphate 5-kinase type 1 beta, transcript variant X3
phosphatidylinositol-4-phosphate 5-kinase type 1 beta, transcript variant X7
phosphatidylinositol-4-phosphate 5-kinase type 1 beta, transcript variant X5
phosphatidylinositol-4-phosphate 5-kinase type 1 beta, transcript variant X11
phosphatidylinositol-4-phosphate 5-kinase type 1 beta, transcript variant X12
phosphatidylinositol-4-phosphate 5-kinase type 1 beta, transcript variant X1
phosphatidylinositol-4-phosphate 5-kinase type 1 beta, transcript variant X13
phosphatidylinositol-4-phosphate 5-kinase type 1 beta, transcript variant X6
phosphatidylinositol-4-phosphate 5-kinase type 1 beta, transcript variant X2
phosphatidylinositol-4-phosphate 5-kinase type 1 beta, transcript variant X8
phosphatidylinositol-4-phosphate 5-kinase type 1 beta, transcript variant X9
phosphatidylinositol-4-phosphate 5-kinase type 1 beta, transcript variant X10
phosphatidylinositol 4-phosphate 5-kinase type-1 beta isoform X1
phosphatidylinositol 4-phosphate 5-kinase type-1 beta isoform X3
phosphatidylinositol 4-phosphate 5-kinase type-1 beta isoform X2
tight junction protein 2, transcript variant X2
tight junction protein 2, transcript variant X1
tight junction protein 2, transcript variant X3
family with sequence similarity 189 member A2, transcript variant X1
family with sequence similarity 189 member A2, transcript variant X2
amyloid beta precursor protein binding family A member 1, transcript variant X6
amyloid beta precursor protein binding family A member 1, transcript variant X2
amyloid beta precursor protein binding family A member 1, transcript variant X7
amyloid beta precursor protein binding family A member 1, transcript variant X4
amyloid beta precursor protein binding family A member 1, transcript variant X5
amyloid beta precursor protein binding family A member 1, transcript variant X8
amyloid beta precursor protein binding family A member 1, transcript variant X1
amyloid beta precursor protein binding family A member 1, transcript variant X3
amyloid-beta A4 precursor protein-binding family A member 1 isoform X2
amyloid-beta A4 precursor protein-binding family A member 1 isoform X1
protein prenyltransferase alpha subunit repeat containing 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
protein prenyltransferase alpha subunit repeat-containing protein 1
cilia and flagella associated protein 95, transcript variant X1
cilia and flagella associated protein 95, transcript variant X2
cilia and flagella associated protein 95, transcript variant X3
structural maintenance of chromosomes protein 5
Kruppel like factor 9, transcript variant X1
Kruppel like factor 9, transcript variant X2
transient receptor potential cation channel subfamily M member 3, transcript variant X1
transient receptor potential cation channel subfamily M member 3, transcript variant X2
transient receptor potential cation channel subfamily M member 3, transcript variant X3
transient receptor potential cation channel subfamily M member 3, transcript variant X4
transient receptor potential cation channel subfamily M member 3, transcript variant X5
transient receptor potential cation channel subfamily M member 3 isoform X4
transient receptor potential cation channel subfamily M member 3 isoform X2
transient receptor potential cation channel subfamily M member 3 isoform X3
transient receptor potential cation channel subfamily M member 3 isoform X1
transient receptor potential cation channel subfamily M member 3 isoform X5
transient receptor potential cation channel subfamily M member 3, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transient receptor potential cation channel subfamily M member 3 isoform X6
transient receptor potential cation channel subfamily M member 3, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transient receptor potential cation channel subfamily M member 3 isoform X7
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 3 bases at 3 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: lysine-specific demethylase 6A-like
zinc finger AN1-type containing 5, transcript variant X2
zinc finger AN1-type containing 5, transcript variant X3
zinc finger AN1-type containing 5, transcript variant X4
zinc finger AN1-type containing 5, transcript variant X1
zinc finger AN1-type containing 5, transcript variant X5
AN1-type zinc finger protein 5 isoform X1
AN1-type zinc finger protein 5 isoform X3
AN1-type zinc finger protein 5 isoform X2
guanine deaminase, transcript variant X2
guanine deaminase, transcript variant X6
guanine deaminase, transcript variant X1
guanine deaminase, transcript variant X3
guanine deaminase, transcript variant X5
guanine deaminase, transcript variant X7
guanine deaminase, transcript variant X4
abhydrolase domain containing 17B, depalmitoylase
alpha/beta hydrolase domain-containing protein 17B
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
procathepsin L-like, transcript variant X1
procathepsin L-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 87 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
procathepsin L-like, transcript variant X3