Protopterus annectens isolate FY-2018-M chromosome 1.part2, PAN1.0, whole genome shotgun sequence.
type: Entry
definition: Protopterus annectens isolate FY-2018-M chromosome 1.part2, PAN1.0, whole genome shotgun sequence.
sequence version: NC_056727.1
sequence date: 2021-10-20
sequence: sequence
division: CON
label: NC_056727.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA754246
dblink: SAMN17890435
keyword: WGS
keyword: RefSeq
source: Protopterus annectens (West African lungfish)
organism: Protopterus annectens
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Dipnomorpha; Ceratodontiformes; Lepidosirenoidei; Protopteridae; Protopterus.
reference: 1
references: 33545087
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM033075.1.\nAssembly name: PAN1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Northwestern Polytechnical\nUniversity on 2021/07/20. The original whole-genome shotgun project\nhas the accession JAGYFI000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Northwestern Polytechnical University\nAssembly Method :: wtdbg v. huge\nAssembly Name :: PAN1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 50.0x\nSequencing Technology :: Oxford Nanopore\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Protopterus annectens Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 1260428656
topology: linear
so has quality: SO_0000987
location: 1..1260428656
location: region:1-1260428656:1
RO_0002162: 7888

NC_056727
type: RefSeq
SIO_000068: refseq

PRJNA754246
type: BioProject
SIO_000068: bioproject

SAMN17890435
type: BioSample
SIO_000068: biosample

1
title: African lungfish genome sheds light on the vertebrate water-to-land transition
author: Wang, K.
author: Wang, J.
author: Zhu, C.
author: Yang, L.
author: Ren, Y.
author: Ruan, J.
author: Fan, G.
author: Hu, J.
author: Xu, W.
author: Bi, X.
author: Zhu, Y.
author: Song, Y.
author: Chen, H.
author: Ma, T.
author: Zhao, R.
author: Jiang, H.
author: Zhang, B.
author: Feng, C.
author: Yuan, Y.
author: Gan, X.
author: Li, Y.
author: Zeng, H.
author: Liu, Q.
author: Zhang, Y.
author: Shao, F.
author: Hao, S.
author: Zhang, H.
author: Xu, X.
author: Liu, X.
author: Wang, D.
author: Zhu, M.
author: Zhang, G.
author: Zhao, W.
author: Qiu, Q.
author: He, S.
author: Wang, W.
journal: Cell
volume: 184
issue: 5
pages: 1362-1376
year: 2021
pubmed: 33545087

33545087
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260428656:1
position: 1260428656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1260428656:1:source
so part of: sequence
organism: Protopterus annectens
mol type: genomic DNA
isolate: FY-2018-M
isolation source: ornamental fish market
chromosome: 1.part2
sex: male
tissue type: muscle
country: China: Guangzhou

7888
type: Taxonomy
SIO_000068: taxonomy

TRNAT-AGU
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: TRNAT-AGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3217349..3217421
location: region:3217349-3217421:1
so has part: feature:3217349-3217421:1:exon
subclass of: SO_0000663

122792636
type: Gene
SIO_000068: ncbigene

position:3217349:1
position: 3217349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3217421:1
position: 3217421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3217349-3217421:1:exon

TRNAT-AGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
gene: TRNAT-AGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3217382..3217384,aa:Thr,seq:agt)
SIO_010081: TRNAT-AGU
subclass of: SO_0000673
so part of: TRNAT-AGU
location: 3217349..3217421
location: region:3217349-3217421:1
so has part: feature:3217349-3217421:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3217349-3217421:1:exon

EFEMP1
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: EFEMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4362498..5830507)
location: region:4362498-5830507:-1
so has part: feature:4362498-5830507:-1:exon
subclass of: SO_0000010

122787818
type: Gene
SIO_000068: ncbigene

position:4362498:-1
position: 4362498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5830507:-1
position: 5830507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4362498-5830507:-1:exon

EFEMP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: EFEMP1
product: EGF containing fibulin extracellular matrix protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_044054759.1
SIO_010081: EFEMP1
subclass of: SO_0000673
so part of: EFEMP1
location: complement(join(4362498..4366228,4393064..4393259,4393359..4393482,4537178..4537294,4574511..4574630,4594433..4594552,4895789..4895911,5715520..5715771,5715897..5715945,5829690..5829778,5830371..5830507))
location: region:4362498-5830507:-1
so has part: feature:5830371-5830507:-1:exon
so has part: feature:5829690-5829778:-1:exon
so has part: feature:5715897-5715945:-1:exon
so has part: feature:5715520-5715771:-1:exon
so has part: feature:4895789-4895911:-1:exon
so has part: feature:4594433-4594552:-1:exon
so has part: feature:4574511-4574630:-1:exon
so has part: feature:4537178-4537294:-1:exon
so has part: feature:4393359-4393482:-1:exon
so has part: feature:4393064-4393259:-1:exon
so has part: feature:4362498-4366228:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5830371-5830507:-1:exon

position:5830371:-1
position: 5830371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5829690-5829778:-1:exon

position:5829690:-1
position: 5829690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5829778:-1
position: 5829778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5715897-5715945:-1:exon

position:5715897:-1
position: 5715897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5715945:-1
position: 5715945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5715520-5715771:-1:exon

position:5715520:-1
position: 5715520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5715771:-1
position: 5715771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4895789-4895911:-1:exon

position:4895789:-1
position: 4895789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4895911:-1
position: 4895911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4594433-4594552:-1:exon

position:4594433:-1
position: 4594433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4594552:-1
position: 4594552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4574511-4574630:-1:exon

position:4574511:-1
position: 4574511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4574630:-1
position: 4574630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4537178-4537294:-1:exon

position:4537178:-1
position: 4537178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4537294:-1
position: 4537294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4393359-4393482:-1:exon

position:4393359:-1
position: 4393359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4393482:-1
position: 4393482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4393064-4393259:-1:exon

position:4393064:-1
position: 4393064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4393259:-1
position: 4393259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4362498-4366228:-1:exon

position:4366228:-1
position: 4366228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFEMP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: EFEMP1
product: EGF containing fibulin extracellular matrix protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_044054754.1
SIO_010081: EFEMP1
subclass of: SO_0000673
so part of: EFEMP1
location: complement(join(4362498..4366228,4393064..4393259,4393359..4393482,4537178..4537294,4574511..4574630,4594433..4594552,4895789..4895911,5715520..5715771,5715897..5715945,5829690..5829778,5830302..5830507))
location: region:4362498-5830507:-1
so has part: feature:5830302-5830507:-1:exon
so has part: feature:5829690-5829778:-1:exon
so has part: feature:5715897-5715945:-1:exon
so has part: feature:5715520-5715771:-1:exon
so has part: feature:4895789-4895911:-1:exon
so has part: feature:4594433-4594552:-1:exon
so has part: feature:4574511-4574630:-1:exon
so has part: feature:4537178-4537294:-1:exon
so has part: feature:4393359-4393482:-1:exon
so has part: feature:4393064-4393259:-1:exon
so has part: feature:4362498-4366228:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5830302-5830507:-1:exon

position:5830302:-1
position: 5830302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5829690-5829778:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5715897-5715945:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5715520-5715771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4895789-4895911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4594433-4594552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4574511-4574630:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4537178-4537294:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4393359-4393482:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4393064-4393259:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4362498-4366228:-1:exon

EFEMP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: EFEMP1
product: EGF containing fibulin extracellular matrix protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_044054738.1
SIO_010081: EFEMP1
subclass of: SO_0000673
so part of: EFEMP1
location: complement(join(4362498..4366228,4393064..4393259,4393359..4393482,4537178..4537294,4574511..4574630,4594433..4594552,4895789..4895911,5715520..5715771,5715897..5715945,5829690..5829778,5830360..5830506))
location: region:4362498-5830506:-1
so has part: feature:5830360-5830506:-1:exon
so has part: feature:5829690-5829778:-1:exon
so has part: feature:5715897-5715945:-1:exon
so has part: feature:5715520-5715771:-1:exon
so has part: feature:4895789-4895911:-1:exon
so has part: feature:4594433-4594552:-1:exon
so has part: feature:4574511-4574630:-1:exon
so has part: feature:4537178-4537294:-1:exon
so has part: feature:4393359-4393482:-1:exon
so has part: feature:4393064-4393259:-1:exon
so has part: feature:4362498-4366228:-1:exon

position:5830506:-1
position: 5830506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5830360-5830506:-1:exon

position:5830360:-1
position: 5830360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5829690-5829778:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5715897-5715945:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5715520-5715771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4895789-4895911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4594433-4594552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4574511-4574630:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4537178-4537294:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4393359-4393482:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4393064-4393259:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4362498-4366228:-1:exon

EFEMP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: EFEMP1
product: EGF containing fibulin extracellular matrix protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_044054729.1
SIO_010081: EFEMP1
subclass of: SO_0000673
so part of: EFEMP1
location: complement(join(4362498..4366228,4393064..4393259,4393359..4393482,4537178..4537294,4574511..4574630,4594433..4594552,4895789..4895911,5715520..5715771,5715897..5715945,5829690..5829778,5830204..5830329))
location: region:4362498-5830329:-1
so has part: feature:5830204-5830329:-1:exon
so has part: feature:5829690-5829778:-1:exon
so has part: feature:5715897-5715945:-1:exon
so has part: feature:5715520-5715771:-1:exon
so has part: feature:4895789-4895911:-1:exon
so has part: feature:4594433-4594552:-1:exon
so has part: feature:4574511-4574630:-1:exon
so has part: feature:4537178-4537294:-1:exon
so has part: feature:4393359-4393482:-1:exon
so has part: feature:4393064-4393259:-1:exon
so has part: feature:4362498-4366228:-1:exon

position:5830329:-1
position: 5830329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5830204-5830329:-1:exon

position:5830204:-1
position: 5830204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5829690-5829778:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5715897-5715945:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5715520-5715771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4895789-4895911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4594433-4594552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4574511-4574630:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4537178-4537294:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4393359-4393482:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4393064-4393259:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4362498-4366228:-1:exon

EFEMP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: EFEMP1
product: EGF containing fibulin extracellular matrix protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_044054745.1
SIO_010081: EFEMP1
subclass of: SO_0000673
so part of: EFEMP1
location: complement(join(4362498..4366228,4393064..4393259,4393359..4393482,4537178..4537294,4574511..4574630,4594433..4594552,4895789..4895911,5715520..5715771,5715897..5715945,5829690..5829778,5830000..5830172))
location: region:4362498-5830172:-1
so has part: feature:5830000-5830172:-1:exon
so has part: feature:5829690-5829778:-1:exon
so has part: feature:5715897-5715945:-1:exon
so has part: feature:5715520-5715771:-1:exon
so has part: feature:4895789-4895911:-1:exon
so has part: feature:4594433-4594552:-1:exon
so has part: feature:4574511-4574630:-1:exon
so has part: feature:4537178-4537294:-1:exon
so has part: feature:4393359-4393482:-1:exon
so has part: feature:4393064-4393259:-1:exon
so has part: feature:4362498-4366228:-1:exon

position:5830172:-1
position: 5830172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5830000-5830172:-1:exon

position:5830000:-1
position: 5830000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5829690-5829778:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5715897-5715945:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5715520-5715771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4895789-4895911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4594433-4594552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4574511-4574630:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4537178-4537294:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4393359-4393482:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4393064-4393259:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4362498-4366228:-1:exon

EFEMP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: EFEMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EGF-containing fibulin-like extracellular matrix protein 1 isoform X1
translation: MKCSLFCLPFVYMKYTFIFFGTEMLPRIFLLLALLHTVRLQEAGDTITYTQCTDGYQWDAIREQCKDIDECAVVNDACKGGMKCVNHYGGYLCLPKTAQIIVNNGEHDASTVAPALLPTQSRAPAARPTLRPHRIRCAPGHAPDDLNQCRDVDECAEGAHSCHPEQMCTNTWGSYICQCLPGYQKIRNECVNIDECAVPPYCSHKCVDTPGSYYCLCNPGFQLSSNNHTCNDVNECETSNPCDQLCYNIIGSYFCQCRQGFEMNRDRVSCRDIDECSYSYLCQYQCINEPGGYTCACPEGYQVLGNRMCQDVNECETGNVCGEQEICWNYNGGFRCYPRNPCQEPYVQTSENRCVCHGINAVCRGLPSSILYRYMNIRSDRSLPSDIFQIQATVIYPNTINSFHIKAGNDGGEFYLRQINNISAMLVLVKPVTGPKEYIVDLEMTTVSTMSYQSSSLLRLTIIVGPYSF
SIO_010081: EFEMP1
subclass of: SO_0000673
so part of: EFEMP1
location: complement(join(4366070..4366228,4393064..4393259,4393359..4393482,4537178..4537294,4574511..4574630,4594433..4594552,4895789..4895911,5715520..5715771,5715897..5715945,5829690..5829778,5830204..5830264))
location: region:4366070-5830264:-1
so has part: feature:5830204-5830264:-1:exon
so has part: feature:5829690-5829778:-1:exon
so has part: feature:5715897-5715945:-1:exon
so has part: feature:5715520-5715771:-1:exon
so has part: feature:4895789-4895911:-1:exon
so has part: feature:4594433-4594552:-1:exon
so has part: feature:4574511-4574630:-1:exon
so has part: feature:4537178-4537294:-1:exon
so has part: feature:4393359-4393482:-1:exon
so has part: feature:4393064-4393259:-1:exon
so has part: feature:4366070-4366228:-1:exon

XP_043910664.1
type: Protein
SIO_000068: ncbiprotein

position:4366070:-1
position: 4366070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5830264:-1
position: 5830264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5830204-5830264:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5829690-5829778:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5715897-5715945:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5715520-5715771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4895789-4895911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4594433-4594552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4574511-4574630:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4537178-4537294:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4393359-4393482:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4393064-4393259:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4366070-4366228:-1:exon

EFEMP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: EFEMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EGF-containing fibulin-like extracellular matrix protein 1 isoform X2
translation: MLPRIFLLLALLHTVRLQEAGDTITYTQCTDGYQWDAIREQCKDIDECAVVNDACKGGMKCVNHYGGYLCLPKTAQIIVNNGEHDASTVAPALLPTQSRAPAARPTLRPHRIRCAPGHAPDDLNQCRDVDECAEGAHSCHPEQMCTNTWGSYICQCLPGYQKIRNECVNIDECAVPPYCSHKCVDTPGSYYCLCNPGFQLSSNNHTCNDVNECETSNPCDQLCYNIIGSYFCQCRQGFEMNRDRVSCRDIDECSYSYLCQYQCINEPGGYTCACPEGYQVLGNRMCQDVNECETGNVCGEQEICWNYNGGFRCYPRNPCQEPYVQTSENRCVCHGINAVCRGLPSSILYRYMNIRSDRSLPSDIFQIQATVIYPNTINSFHIKAGNDGGEFYLRQINNISAMLVLVKPVTGPKEYIVDLEMTTVSTMSYQSSSLLRLTIIVGPYSF
SIO_010081: EFEMP1
subclass of: SO_0000673
so part of: EFEMP1
location: complement(join(4366070..4366228,4393064..4393259,4393359..4393482,4537178..4537294,4574511..4574630,4594433..4594552,4895789..4895911,5715520..5715771,5715897..5715945,5829690..5829770))
location: region:4366070-5829770:-1
so has part: feature:5829690-5829770:-1:exon
so has part: feature:5715897-5715945:-1:exon
so has part: feature:5715520-5715771:-1:exon
so has part: feature:4895789-4895911:-1:exon
so has part: feature:4594433-4594552:-1:exon
so has part: feature:4574511-4574630:-1:exon
so has part: feature:4537178-4537294:-1:exon
so has part: feature:4393359-4393482:-1:exon
so has part: feature:4393064-4393259:-1:exon
so has part: feature:4366070-4366228:-1:exon

XP_043910673.1
type: Protein
SIO_000068: ncbiprotein

position:5829770:-1
position: 5829770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5829690-5829770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5715897-5715945:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5715520-5715771:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4895789-4895911:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4594433-4594552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4574511-4574630:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4537178-4537294:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4393359-4393482:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4393064-4393259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4366070-4366228:-1:exon

EFEMP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: EFEMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EGF-containing fibulin-like extracellular matrix protein 1 isoform X2
translation: MLPRIFLLLALLHTVRLQEAGDTITYTQCTDGYQWDAIREQCKDIDECAVVNDACKGGMKCVNHYGGYLCLPKTAQIIVNNGEHDASTVAPALLPTQSRAPAARPTLRPHRIRCAPGHAPDDLNQCRDVDECAEGAHSCHPEQMCTNTWGSYICQCLPGYQKIRNECVNIDECAVPPYCSHKCVDTPGSYYCLCNPGFQLSSNNHTCNDVNECETSNPCDQLCYNIIGSYFCQCRQGFEMNRDRVSCRDIDECSYSYLCQYQCINEPGGYTCACPEGYQVLGNRMCQDVNECETGNVCGEQEICWNYNGGFRCYPRNPCQEPYVQTSENRCVCHGINAVCRGLPSSILYRYMNIRSDRSLPSDIFQIQATVIYPNTINSFHIKAGNDGGEFYLRQINNISAMLVLVKPVTGPKEYIVDLEMTTVSTMSYQSSSLLRLTIIVGPYSF
SIO_010081: EFEMP1
subclass of: SO_0000673
so part of: EFEMP1
location: complement(join(4366070..4366228,4393064..4393259,4393359..4393482,4537178..4537294,4574511..4574630,4594433..4594552,4895789..4895911,5715520..5715771,5715897..5715945,5829690..5829770))
location: region:4366070-5829770:-1
so has part: feature:5829690-5829770:-1:exon
so has part: feature:5715897-5715945:-1:exon
so has part: feature:5715520-5715771:-1:exon
so has part: feature:4895789-4895911:-1:exon
so has part: feature:4594433-4594552:-1:exon
so has part: feature:4574511-4574630:-1:exon
so has part: feature:4537178-4537294:-1:exon
so has part: feature:4393359-4393482:-1:exon
so has part: feature:4393064-4393259:-1:exon
so has part: feature:4366070-4366228:-1:exon

XP_043910680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5829690-5829770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5715897-5715945:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5715520-5715771:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4895789-4895911:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4594433-4594552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4574511-4574630:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4537178-4537294:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4393359-4393482:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4393064-4393259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4366070-4366228:-1:exon

EFEMP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: EFEMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EGF-containing fibulin-like extracellular matrix protein 1 isoform X2
translation: MLPRIFLLLALLHTVRLQEAGDTITYTQCTDGYQWDAIREQCKDIDECAVVNDACKGGMKCVNHYGGYLCLPKTAQIIVNNGEHDASTVAPALLPTQSRAPAARPTLRPHRIRCAPGHAPDDLNQCRDVDECAEGAHSCHPEQMCTNTWGSYICQCLPGYQKIRNECVNIDECAVPPYCSHKCVDTPGSYYCLCNPGFQLSSNNHTCNDVNECETSNPCDQLCYNIIGSYFCQCRQGFEMNRDRVSCRDIDECSYSYLCQYQCINEPGGYTCACPEGYQVLGNRMCQDVNECETGNVCGEQEICWNYNGGFRCYPRNPCQEPYVQTSENRCVCHGINAVCRGLPSSILYRYMNIRSDRSLPSDIFQIQATVIYPNTINSFHIKAGNDGGEFYLRQINNISAMLVLVKPVTGPKEYIVDLEMTTVSTMSYQSSSLLRLTIIVGPYSF
SIO_010081: EFEMP1
subclass of: SO_0000673
so part of: EFEMP1
location: complement(join(4366070..4366228,4393064..4393259,4393359..4393482,4537178..4537294,4574511..4574630,4594433..4594552,4895789..4895911,5715520..5715771,5715897..5715945,5829690..5829770))
location: region:4366070-5829770:-1
so has part: feature:5829690-5829770:-1:exon
so has part: feature:5715897-5715945:-1:exon
so has part: feature:5715520-5715771:-1:exon
so has part: feature:4895789-4895911:-1:exon
so has part: feature:4594433-4594552:-1:exon
so has part: feature:4574511-4574630:-1:exon
so has part: feature:4537178-4537294:-1:exon
so has part: feature:4393359-4393482:-1:exon
so has part: feature:4393064-4393259:-1:exon
so has part: feature:4366070-4366228:-1:exon

XP_043910689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5829690-5829770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5715897-5715945:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5715520-5715771:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4895789-4895911:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4594433-4594552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4574511-4574630:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4537178-4537294:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4393359-4393482:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4393064-4393259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4366070-4366228:-1:exon

EFEMP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: EFEMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EGF-containing fibulin-like extracellular matrix protein 1 isoform X2
translation: MLPRIFLLLALLHTVRLQEAGDTITYTQCTDGYQWDAIREQCKDIDECAVVNDACKGGMKCVNHYGGYLCLPKTAQIIVNNGEHDASTVAPALLPTQSRAPAARPTLRPHRIRCAPGHAPDDLNQCRDVDECAEGAHSCHPEQMCTNTWGSYICQCLPGYQKIRNECVNIDECAVPPYCSHKCVDTPGSYYCLCNPGFQLSSNNHTCNDVNECETSNPCDQLCYNIIGSYFCQCRQGFEMNRDRVSCRDIDECSYSYLCQYQCINEPGGYTCACPEGYQVLGNRMCQDVNECETGNVCGEQEICWNYNGGFRCYPRNPCQEPYVQTSENRCVCHGINAVCRGLPSSILYRYMNIRSDRSLPSDIFQIQATVIYPNTINSFHIKAGNDGGEFYLRQINNISAMLVLVKPVTGPKEYIVDLEMTTVSTMSYQSSSLLRLTIIVGPYSF
SIO_010081: EFEMP1
subclass of: SO_0000673
so part of: EFEMP1
location: complement(join(4366070..4366228,4393064..4393259,4393359..4393482,4537178..4537294,4574511..4574630,4594433..4594552,4895789..4895911,5715520..5715771,5715897..5715945,5829690..5829770))
location: region:4366070-5829770:-1
so has part: feature:5829690-5829770:-1:exon
so has part: feature:5715897-5715945:-1:exon
so has part: feature:5715520-5715771:-1:exon
so has part: feature:4895789-4895911:-1:exon
so has part: feature:4594433-4594552:-1:exon
so has part: feature:4574511-4574630:-1:exon
so has part: feature:4537178-4537294:-1:exon
so has part: feature:4393359-4393482:-1:exon
so has part: feature:4393064-4393259:-1:exon
so has part: feature:4366070-4366228:-1:exon

XP_043910694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5829690-5829770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5715897-5715945:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5715520-5715771:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4895789-4895911:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4594433-4594552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4574511-4574630:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4537178-4537294:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4393359-4393482:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4393064-4393259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4366070-4366228:-1:exon

CCDC85A
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: CCDC85A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8279402..8288384
location: region:8279402-8288384:1
so has part: feature:8279402-8288384:1:exon
subclass of: SO_0000010

122787850
type: Gene
SIO_000068: ncbigene

position:8279402:1
position: 8279402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8288384:1
position: 8288384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8279402-8288384:1:exon

CCDC85A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: CCDC85A
product: coiled-coil domain containing 85A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054769.1
SIO_010081: CCDC85A
subclass of: SO_0000673
so part of: CCDC85A
location: join(8279402..8280152,8285652..8288384)
location: region:8279402-8288384:1
so has part: feature:8279402-8280152:1:exon
so has part: feature:8285652-8288384:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8279402-8280152:1:exon

position:8280152:1
position: 8280152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8285652-8288384:1:exon

position:8285652:1
position: 8285652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC85A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: CCDC85A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 85A
translation: MSKAAVSADGAGEDLSKVSDEELLKCSKEELIRRLRRAEADKMSVMLDHSNLIRDVNRRLQLHLTEIRGLKDINQKLQEDNQELRDLCCFLDDDRQKGKKISREWQRLGKYSAGVMRRDVALYLQKLKELEMRQDEVVRENMDLKELCIMLDEERATAGGSRSSIDSQSSLTQLSAAAGPLMRDVGDGSSTSSAGSTGSPDHQKHISSSSPEHLQKPRAEGNQEQVKHSSASPEHLQKHKRSASPDPQKHLRGTSPEHHKCFGKGSPEHHRHRSSSPEGLQKHIMSTSSPEHFQKQVAGSSPEHQKHINSSPEHNQKHTFTGSMEHLQKARGNSPETLKQNYGGNPEHLKHLAGSSREGTLKRQGTEDVSPHHRSLYNGMNGGLVDLLKPHLQKLQTL
SIO_010081: CCDC85A
subclass of: SO_0000673
so part of: CCDC85A
location: join(8279940..8280152,8285652..8286635)
location: region:8279940-8286635:1
so has part: feature:8279940-8280152:1:exon
so has part: feature:8285652-8286635:1:exon

XP_043910704.1
type: Protein
SIO_000068: ncbiprotein

position:8279940:1
position: 8279940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8286635:1
position: 8286635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8279940-8280152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8285652-8286635:1:exon

TRNAL-CAG
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: TRNAL-CAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 17062702..17062814
location: region:17062702-17062814:1
so has part: feature:17062702-17062814:1:exon
subclass of: SO_0000663

122792656
type: Gene
SIO_000068: ncbigene

position:17062702:1
position: 17062702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17062814:1
position: 17062814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17062702-17062814:1:exon

TRNAL-CAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
gene: TRNAL-CAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA leucine (anticodon CAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:17062736..17062738,aa:Leu,seq:cag)
SIO_010081: TRNAL-CAG
subclass of: SO_0000673
so part of: TRNAL-CAG
location: join(17062702..17062739,17062769..17062814)
location: region:17062702-17062814:1
so has part: feature:17062702-17062739:1:exon
so has part: feature:17062769-17062814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17062702-17062739:1:exon

position:17062739:1
position: 17062739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17062769-17062814:1:exon

position:17062769:1
position: 17062769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122792505
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122792505
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 17849561..17849734
location: region:17849561-17849734:1
so has part: feature:17849561-17849734:1:exon

122792505
type: Gene
SIO_000068: ncbigene

position:17849561:1
position: 17849561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17849734:1
position: 17849734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17849561-17849734:1:exon

LOC122792505
type: Exon
subclass of: SO_0000147
RO_0002162: 7888
gene: LOC122792505
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC122792505
subclass of: SO_0000673
so part of: LOC122792505
location: 17849561..17849734
location: region:17849561-17849734:1
so has part: feature:17849561-17849734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17849561-17849734:1:exon

TRNAR-CCU
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: TRNAR-CCU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 23823554..23823626
location: region:23823554-23823626:1
so has part: feature:23823554-23823626:1:exon
subclass of: SO_0000663

122792668
type: Gene
SIO_000068: ncbigene

position:23823554:1
position: 23823554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23823626:1
position: 23823626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23823554-23823626:1:exon

TRNAR-CCU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
gene: TRNAR-CCU
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA arginine (anticodon CCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:23823587..23823589,aa:Arg,seq:cct)
SIO_010081: TRNAR-CCU
subclass of: SO_0000673
so part of: TRNAR-CCU
location: 23823554..23823626
location: region:23823554-23823626:1
so has part: feature:23823554-23823626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23823554-23823626:1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 24376781..24376853
location: region:24376781-24376853:1
so has part: feature:24376781-24376853:1:exon
subclass of: SO_0000663

122792679
type: Gene
SIO_000068: ncbigene

position:24376781:1
position: 24376781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24376853:1
position: 24376853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24376781-24376853:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:24376814..24376816,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 24376781..24376853
location: region:24376781-24376853:1
so has part: feature:24376781-24376853:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24376781-24376853:1:exon

LOC122792454
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122792454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 25807098..25812429
location: region:25807098-25812429:1
so has part: feature:25807098-25812429:1:exon
subclass of: SO_0000011

122792454
type: Gene
SIO_000068: ncbigene

position:25807098:1
position: 25807098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25812429:1
position: 25812429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25807098-25812429:1:exon

LOC122792454
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7888
nc RNA class: lncRNA
gene: LOC122792454
product: uncharacterized LOC122792454
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_006363307.1
SIO_010081: LOC122792454
subclass of: SO_0000673
so part of: LOC122792454
location: join(25807098..25807171,25809674..25809797,25812296..25812429)
location: region:25807098-25812429:1
so has part: feature:25807098-25807171:1:exon
so has part: feature:25809674-25809797:1:exon
so has part: feature:25812296-25812429:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25807098-25807171:1:exon

position:25807171:1
position: 25807171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:25809674-25809797:1:exon

position:25809674:1
position: 25809674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25809797:1
position: 25809797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:25812296-25812429:1:exon

position:25812296:1
position: 25812296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NRXN1
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(25976572..30145124)
location: region:25976572-30145124:-1
so has part: feature:25976572-30145124:-1:exon
subclass of: SO_0000010

122787861
type: Gene
SIO_000068: ncbigene

position:25976572:-1
position: 25976572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30145124:-1
position: 30145124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25976572-30145124:-1:exon

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054788.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017222..26017309,26314682..26314998,26316354..26316443,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27905968..27905994,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28785810..28785833,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140761,30144872..30145124))
location: region:25976572-30145124:-1
so has part: feature:30144872-30145124:-1:exon
so has part: feature:30139382-30140761:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28785810-28785833:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27905968-27905994:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26316354-26316443:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30144872-30145124:-1:exon

position:30144872:-1
position: 30144872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:30139382-30140761:-1:exon

position:30139382:-1
position: 30139382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30140761:-1
position: 30140761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:29672507-29672524:-1:exon

position:29672507:-1
position: 29672507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29672524:-1
position: 29672524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:29668468-29668497:-1:exon

position:29668468:-1
position: 29668468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29668497:-1
position: 29668497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:29667705-29667716:-1:exon

position:29667705:-1
position: 29667705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29667716:-1
position: 29667716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:28808707-28809008:-1:exon

position:28808707:-1
position: 28808707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28809008:-1
position: 28809008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:28785810-28785833:-1:exon

position:28785810:-1
position: 28785810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28785833:-1
position: 28785833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:28784701-28784862:-1:exon

position:28784701:-1
position: 28784701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28784862:-1
position: 28784862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:28357388-28357826:-1:exon

position:28357388:-1
position: 28357388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28357826:-1
position: 28357826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:28086920-28087303:-1:exon

position:28086920:-1
position: 28086920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28087303:-1
position: 28087303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:27909083-27909286:-1:exon

position:27909083:-1
position: 27909083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27909286:-1
position: 27909286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:27905968-27905994:-1:exon

position:27905968:-1
position: 27905968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27905994:-1
position: 27905994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:27545882-27546004:-1:exon

position:27545882:-1
position: 27545882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27546004:-1
position: 27546004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:27411596-27411977:-1:exon

position:27411596:-1
position: 27411596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27411977:-1
position: 27411977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:27402116-27402306:-1:exon

position:27402116:-1
position: 27402116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27402306:-1
position: 27402306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:27374187-27374360:-1:exon

position:27374187:-1
position: 27374187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27374360:-1
position: 27374360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:27287477-27287596:-1:exon

position:27287477:-1
position: 27287477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27287596:-1
position: 27287596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:26653335-26653519:-1:exon

position:26653335:-1
position: 26653335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26653519:-1
position: 26653519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:26356986-26357157:-1:exon

position:26356986:-1
position: 26356986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26357157:-1
position: 26357157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:26316354-26316443:-1:exon

position:26316354:-1
position: 26316354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26316443:-1
position: 26316443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:26314682-26314998:-1:exon

position:26314682:-1
position: 26314682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26314998:-1
position: 26314998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:26017222-26017309:-1:exon

position:26017222:-1
position: 26017222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26017309:-1
position: 26017309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:25976572-25980095:-1:exon

position:25980095:-1
position: 25980095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054802.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017222..26017309,26314682..26314998,26316354..26316443,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27905968..27905994,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28785810..28785833,28808707..28809008,29668468..29668497,29672507..29672524,30139382..30140761,30144837..30145124))
location: region:25976572-30145124:-1
so has part: feature:30144837-30145124:-1:exon
so has part: feature:30139382-30140761:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28785810-28785833:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27905968-27905994:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26316354-26316443:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30144837-30145124:-1:exon

position:30144837:-1
position: 30144837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:30139382-30140761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28785810-28785833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27905968-27905994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26316354-26316443:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:25976572-25980095:-1:exon

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X13
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054867.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017231..26017309,26314682..26314998,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140761,30144837..30145124))
location: region:25976572-30145124:-1
so has part: feature:30144837-30145124:-1:exon
so has part: feature:30139382-30140761:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017231-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30144837-30145124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30139382-30140761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26017231-26017309:-1:exon

position:26017231:-1
position: 26017231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:25976572-25980095:-1:exon

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X12
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054861.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017222..26017309,26314682..26314998,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140761,30144837..30145124))
location: region:25976572-30145124:-1
so has part: feature:30144837-30145124:-1:exon
so has part: feature:30139382-30140761:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30144837-30145124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30139382-30140761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:25976572-25980095:-1:exon

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X19
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054907.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017222..26017309,26314682..26314998,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27905968..27905994,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140761,30144837..30145124))
location: region:25976572-30145124:-1
so has part: feature:30144837-30145124:-1:exon
so has part: feature:30139382-30140761:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27905968-27905994:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30144837-30145124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30139382-30140761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27905968-27905994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:25976572-25980095:-1:exon

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054825.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017231..26017309,26314682..26314998,26316354..26316443,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27905968..27905994,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140761,30144837..30145124))
location: region:25976572-30145124:-1
so has part: feature:30144837-30145124:-1:exon
so has part: feature:30139382-30140761:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27905968-27905994:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26316354-26316443:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017231-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30144837-30145124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30139382-30140761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27905968-27905994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26316354-26316443:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:26017231-26017309:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:25976572-25980095:-1:exon

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054812.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017222..26017309,26314682..26314998,26316354..26316443,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27905968..27905994,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140761,30144837..30145124))
location: region:25976572-30145124:-1
so has part: feature:30144837-30145124:-1:exon
so has part: feature:30139382-30140761:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27905968-27905994:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26316354-26316443:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30144837-30145124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30139382-30140761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27905968-27905994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26316354-26316443:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:25976572-25980095:-1:exon

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X11
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054853.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017231..26017309,26314682..26314998,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28785810..28785833,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140761,30144837..30145124))
location: region:25976572-30145124:-1
so has part: feature:30144837-30145124:-1:exon
so has part: feature:30139382-30140761:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28785810-28785833:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017231-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30144837-30145124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30139382-30140761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28785810-28785833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26017231-26017309:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:25976572-25980095:-1:exon

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054847.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017222..26017309,26314682..26314998,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28785810..28785833,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140761,30144837..30145124))
location: region:25976572-30145124:-1
so has part: feature:30144837-30145124:-1:exon
so has part: feature:30139382-30140761:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28785810-28785833:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30144837-30145124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30139382-30140761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28785810-28785833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:25976572-25980095:-1:exon

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054818.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017222..26017309,26314682..26314998,26316354..26316443,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28785810..28785833,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140761,30144837..30145124))
location: region:25976572-30145124:-1
so has part: feature:30144837-30145124:-1:exon
so has part: feature:30139382-30140761:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28785810-28785833:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26316354-26316443:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30144837-30145124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30139382-30140761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28785810-28785833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26316354-26316443:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:25976572-25980095:-1:exon

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054840.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017231..26017309,26314682..26314998,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27905968..27905994,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28785810..28785833,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140761,30144837..30145124))
location: region:25976572-30145124:-1
so has part: feature:30144837-30145124:-1:exon
so has part: feature:30139382-30140761:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28785810-28785833:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27905968-27905994:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017231-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30144837-30145124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30139382-30140761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28785810-28785833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27905968-27905994:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:26017231-26017309:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:25976572-25980095:-1:exon

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054832.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017222..26017309,26314682..26314998,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27905968..27905994,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28785810..28785833,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140761,30144837..30145124))
location: region:25976572-30145124:-1
so has part: feature:30144837-30145124:-1:exon
so has part: feature:30139382-30140761:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28785810-28785833:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27905968-27905994:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30144837-30145124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30139382-30140761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28785810-28785833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27905968-27905994:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:25976572-25980095:-1:exon

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054796.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017231..26017309,26314682..26314998,26316354..26316443,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27905968..27905994,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28785810..28785833,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140761,30144837..30145124))
location: region:25976572-30145124:-1
so has part: feature:30144837-30145124:-1:exon
so has part: feature:30139382-30140761:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28785810-28785833:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27905968-27905994:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26316354-26316443:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017231-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30144837-30145124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30139382-30140761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28785810-28785833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27905968-27905994:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26316354-26316443:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:26017231-26017309:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:25976572-25980095:-1:exon

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054780.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017222..26017309,26314682..26314998,26316354..26316443,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27905968..27905994,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28785810..28785833,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140761,30144837..30145124))
location: region:25976572-30145124:-1
so has part: feature:30144837-30145124:-1:exon
so has part: feature:30139382-30140761:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28785810-28785833:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27905968-27905994:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26316354-26316443:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30144837-30145124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30139382-30140761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28785810-28785833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27905968-27905994:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26316354-26316443:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:25976572-25980095:-1:exon

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X17
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054894.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017231..26017309,26314682..26314998,26356986..26357157,26653335..26653519,26860407..26861506))
location: region:25976572-26861506:-1
so has part: feature:26860407-26861506:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017231-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

position:26861506:-1
position: 26861506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26860407-26861506:-1:exon

position:26860407:-1
position: 26860407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26017231-26017309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:25976572-25980095:-1:exon

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X15
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054881.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017231..26017309,26314682..26314998,26316354..26316443,26356986..26357157,26653335..26653519,26860407..26861505))
location: region:25976572-26861505:-1
so has part: feature:26860407-26861505:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26316354-26316443:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017231-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

position:26861505:-1
position: 26861505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26860407-26861505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26316354-26316443:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26017231-26017309:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25976572-25980095:-1:exon

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X16
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054887.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017222..26017309,26314682..26314998,26356986..26357157,26653335..26653519,26860407..26861504))
location: region:25976572-26861504:-1
so has part: feature:26860407-26861504:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

position:26861504:-1
position: 26861504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26860407-26861504:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:25976572-25980095:-1:exon

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X14
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054874.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017222..26017309,26314682..26314998,26316354..26316443,26356986..26357157,26653335..26653519,26860407..26861503))
location: region:25976572-26861503:-1
so has part: feature:26860407-26861503:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26316354-26316443:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

position:26861503:-1
position: 26861503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26860407-26861503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26316354-26316443:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25976572-25980095:-1:exon

NRXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: NRXN1
product: neurexin 1, transcript variant X18
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054900.1
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25976572..25980095,26017222..26017309,26093555..26094051))
location: region:25976572-26094051:-1
so has part: feature:26093555-26094051:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25976572-25980095:-1:exon

position:26094051:-1
position: 26094051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26093555-26094051:-1:exon

position:26093555:-1
position: 26093555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25976572-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X3
translation: MAVDLKQGSYLLWMALLLGCLLDIGTSLEFSGDEGQWTRFPKWNACCESEMSFKMKTKNSNGLLLYIDDEGFCDFLELVIYEGKLRLRLSIFCSEHVVLHTDTRVDDGAWHHVIVRRNFKNTSLVVDDETKWVEAKSQRRDMTVLSSLFIGGIPPELHLAPLKLTLPTVKDQRPFHGQIIDIVVANEESAPDDSNLVTSGETTPSVCAKEDICQHGGICSVIDDEPVCDCTMTGFQGKDCSEEDNYVEGLAHLMMGDQGKEEYIATFKGSEFFCYDLSQQPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVIYKNNDVRLELSKLAKLGDPKMKIHGIVAFKCENVATLDPITFETPESFIALPRWTAKKTGSISFDFRTTEPNGLILFSHGKPRQQKDAKNPQVVKVDFFAIEMLDGHLYLLLEMGSGTIKIKALPKKVNDGEWYHVDFQRDGRSGTISVNTMRTPYVASGENEILDLDDDLYLGGLPENKEGLVFPTEVWTALLNYGFVGCIRDLFIDGQSKDIRQMAEIQNAAGVKPSCSKDDAKQCINNPCRNNGICRNGWNRYICDCSGTGYLGRSCEREATILSYDGTMFMKVQMPIVMHTEAEDVSLRFRSHRAYGVLMSTTSRDSADTLRLEMDAGRVKLTVNLDCIRINCNTSKGPESIFAGHNLNDNEWHTVRVFRRGKMIKLIVDELQPVTGQMSGDHTRLEFHNIETGIITERRYLSAVPSNFIGHLQSLTFNGMPYIDLCKNGDIEYCELNARFGYTNIIADPVTFKTKASYVTLTTLQAYISMHLFFQLKTTSTDGLILYNSGDGNDFIVVELVKGYIHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVRIDNKITTQSTAGARNLDLKNDLYIGGVTKDMYKGLPKLVSSKEGFQGCLASVDLNGRLPDLISDALFCSGQIERGCEGPSTTCQEDSCANQGVCLQQWDGFTCDCSMTSFSGPLCNDPGTTYIFGKGGGGLITYTWPPNDRPSTRADRLTVGFSTELKDAVLVRVDSSSGLGDYLQLHIDQGKIGVIFNVGTDDITIEESRAIVSDGKYHVVRFTRSGGNATLHLDNWPIIERYPPGNIDNERLAIARQRIPYRLGRVVDDWLLDKGRQLTIFNSQAAIKIGGKDQGRPFQGQLSGLYYNGLKVLNMAADNPNIKIEGSVRLVGEVPSSITTESSGISKQSEMSTSVMETTTTLATSTAGRGKPPTRELIGQPTDDLLVASAECPSDDEDIDPCEPSSGGLANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017222..26017309,26314682..26314998,26316354..26316443,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27905968..27905994,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28785810..28785833,28808707..28809008,29668468..29668497,29672507..29672524,30139382..30140108))
location: region:25979791-30140108:-1
so has part: feature:30139382-30140108:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28785810-28785833:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27905968-27905994:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26316354-26316443:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910737.1
type: Protein
SIO_000068: ncbiprotein

position:25979791:-1
position: 25979791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30140108:-1
position: 30140108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30139382-30140108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28785810-28785833:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27905968-27905994:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26316354-26316443:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:25979791-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X12
translation: MAVDLKQGSYLLWMALLLGCLLDIGTSLEFSGDEGQWTRFPKWNACCESEMSFKMKTKNSNGLLLYIDDEGFCDFLELVIYEGKLRLRLSIFCSEHVVLHTDTRVDDGAWHHVIVRRNFKNTSLVVDDETKWVEAKSQRRDMTVLSSLFIGGIPPELHLAPLKLTLPTVKDQRPFHGQIIDIVVANEESAPDDSNLVTSGETTPSVCAKEDICQHGGICSVIDDEPVCDCTMTGFQGKDCSEEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEFFCYDLSQQPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVIYKNNDVRLELSKLAKLGDPKMKIHGIVAFKCENVATLDPITFETPESFIALPRWTAKKTGSISFDFRTTEPNGLILFSHGKPRQQKDAKNPQVVKVDFFAIEMLDGHLYLLLEMGSGTIKIKALPKKVNDGEWYHVDFQRDGRSGTISVNTMRTPYVASGENEILDLDDDLYLGGLPENKEGLVFPTEVWTALLNYGFVGCIRDLFIDGQSKDIRQMAEIQNAAGVKPSCSKDDAKQCINNPCRNNGICRNGWNRYICDCSGTGYLGRSCEREATILSYDGTMFMKVQMPIVMHTEAEDVSLRFRSHRAYGVLMSTTSRDSADTLRLEMDAGRVKLTVNLGKGPESIFAGHNLNDNEWHTVRVFRRGKMIKLIVDELQPVTGQMSGDHTRLEFHNIETGIITERRYLSAVPSNFIGHLQSLTFNGMPYIDLCKNGDIEYCELNARFGYTNIIADPVTFKTKASYVTLTTLQAYISMHLFFQLKTTSTDGLILYNSGDGNDFIVVELVKGYIHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVRIDNKITTQSTAGARNLDLKNDLYIGGVTKDMYKGLPKLVSSKEGFQGCLASVDLNGRLPDLISDALFCSGQIERGCEGPSTTCQEDSCANQGVCLQQWDGFTCDCSMTSFSGPLCNDPGTTYIFGKGGGGLITYTWPPNDRPSTRADRLTVGFSTELKDAVLVRVDSSSGLGDYLQLHIDQGKIGVIFNVGTDDITIEESRAIVSDGKYHVVRFTRSGGNATLHLDNWPIIERYPPGRQLTIFNSQAAIKIGGKDQGRPFQGQLSGLYYNGLKVLNMAADNPNIKIEGSVRLVGEVPSSITTESSGISKQSEMSTSVMETTTTLATSTAGRGKPPTRELIGQPTDDLLVASAECPSDDEDIDPCEPSSANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017231..26017309,26314682..26314998,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140108))
location: region:25979791-30140108:-1
so has part: feature:30139382-30140108:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017231-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30139382-30140108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26017231-26017309:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:25979791-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X11
translation: MAVDLKQGSYLLWMALLLGCLLDIGTSLEFSGDEGQWTRFPKWNACCESEMSFKMKTKNSNGLLLYIDDEGFCDFLELVIYEGKLRLRLSIFCSEHVVLHTDTRVDDGAWHHVIVRRNFKNTSLVVDDETKWVEAKSQRRDMTVLSSLFIGGIPPELHLAPLKLTLPTVKDQRPFHGQIIDIVVANEESAPDDSNLVTSGETTPSVCAKEDICQHGGICSVIDDEPVCDCTMTGFQGKDCSEEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEFFCYDLSQQPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVIYKNNDVRLELSKLAKLGDPKMKIHGIVAFKCENVATLDPITFETPESFIALPRWTAKKTGSISFDFRTTEPNGLILFSHGKPRQQKDAKNPQVVKVDFFAIEMLDGHLYLLLEMGSGTIKIKALPKKVNDGEWYHVDFQRDGRSGTISVNTMRTPYVASGENEILDLDDDLYLGGLPENKEGLVFPTEVWTALLNYGFVGCIRDLFIDGQSKDIRQMAEIQNAAGVKPSCSKDDAKQCINNPCRNNGICRNGWNRYICDCSGTGYLGRSCEREATILSYDGTMFMKVQMPIVMHTEAEDVSLRFRSHRAYGVLMSTTSRDSADTLRLEMDAGRVKLTVNLGKGPESIFAGHNLNDNEWHTVRVFRRGKMIKLIVDELQPVTGQMSGDHTRLEFHNIETGIITERRYLSAVPSNFIGHLQSLTFNGMPYIDLCKNGDIEYCELNARFGYTNIIADPVTFKTKASYVTLTTLQAYISMHLFFQLKTTSTDGLILYNSGDGNDFIVVELVKGYIHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVRIDNKITTQSTAGARNLDLKNDLYIGGVTKDMYKGLPKLVSSKEGFQGCLASVDLNGRLPDLISDALFCSGQIERGCEGPSTTCQEDSCANQGVCLQQWDGFTCDCSMTSFSGPLCNDPGTTYIFGKGGGGLITYTWPPNDRPSTRADRLTVGFSTELKDAVLVRVDSSSGLGDYLQLHIDQGKIGVIFNVGTDDITIEESRAIVSDGKYHVVRFTRSGGNATLHLDNWPIIERYPPGRQLTIFNSQAAIKIGGKDQGRPFQGQLSGLYYNGLKVLNMAADNPNIKIEGSVRLVGEVPSSITTESSGISKQSEMSTSVMETTTTLATSTAGRGKPPTRELIGQPTDDLLVASAECPSDDEDIDPCEPSSGGLANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017222..26017309,26314682..26314998,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140108))
location: region:25979791-30140108:-1
so has part: feature:30139382-30140108:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30139382-30140108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:25979791-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X18
translation: MAVDLKQGSYLLWMALLLGCLLDIGTSLEFSGDEGQWTRFPKWNACCESEMSFKMKTKNSNGLLLYIDDEGFCDFLELVIYEGKLRLRLSIFCSEHVVLHTDTRVDDGAWHHVIVRRNFKNTSLVVDDETKWVEAKSQRRDMTVLSSLFIGGIPPELHLAPLKLTLPTVKDQRPFHGQIIDIVVANEESAPDDSNLVTSGETTPSVCAKEDICQHGGICSVIDDEPVCDCTMTGFQGKDCSEEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEFFCYDLSQQPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVIYKNNDVRLELSKLAKLGDPKMKIHGIVAFKCENVATLDPITFETPESFIALPRWTAKKTGSISFDFRTTEPNGLILFSHGKPRQQKDAKNPQVVKVDFFAIEMLDGHLYLLLEMGSGTIKIKALPKKVNDGEWYHVDFQRDGRSGTISVNTMRTPYVASGENEILDLDDDLYLGGLPENKEGLVFPTEVWTALLNYGFVGCIRDLFIDGQSKDIRQMAEIQNAAGVKPSCSKDDAKQCINNPCRNNGICRNGWNRYICDCSGTGYLGRSCEREATILSYDGTMFMKVQMPIVMHTEAEDVSLRFRSHRAYGVLMSTTSRDSADTLRLEMDAGRVKLTVNLDCIRINCNTSKGPESIFAGHNLNDNEWHTVRVFRRGKMIKLIVDELQPVTGQMSGDHTRLEFHNIETGIITERRYLSAVPSNFIGHLQSLTFNGMPYIDLCKNGDIEYCELNARFGYTNIIADPVTFKTKASYVTLTTLQAYISMHLFFQLKTTSTDGLILYNSGDGNDFIVVELVKGYIHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVRIDNKITTQSTAGARNLDLKNDLYIGGVTKDMYKGLPKLVSSKEGFQGCLASVDLNGRLPDLISDALFCSGQIERGCEGPSTTCQEDSCANQGVCLQQWDGFTCDCSMTSFSGPLCNDPGTTYIFGKGGGGLITYTWPPNDRPSTRADRLTVGFSTELKDAVLVRVDSSSGLGDYLQLHIDQGKIGVIFNVGTDDITIEESRAIVSDGKYHVVRFTRSGGNATLHLDNWPIIERYPPGRQLTIFNSQAAIKIGGKDQGRPFQGQLSGLYYNGLKVLNMAADNPNIKIEGSVRLVGEVPSSITTESSGISKQSEMSTSVMETTTTLATSTAGRGKPPTRELIGQPTDDLLVASAECPSDDEDIDPCEPSSGGLANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017222..26017309,26314682..26314998,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27905968..27905994,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140108))
location: region:25979791-30140108:-1
so has part: feature:30139382-30140108:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27905968-27905994:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30139382-30140108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27905968-27905994:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:25979791-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X6
translation: MAVDLKQGSYLLWMALLLGCLLDIGTSLEFSGDEGQWTRFPKWNACCESEMSFKMKTKNSNGLLLYIDDEGFCDFLELVIYEGKLRLRLSIFCSEHVVLHTDTRVDDGAWHHVIVRRNFKNTSLVVDDETKWVEAKSQRRDMTVLSSLFIGGIPPELHLAPLKLTLPTVKDQRPFHGQIIDIVVANEESAPDDSNLVTSGETTPSVCAKEDICQHGGICSVIDDEPVCDCTMTGFQGKDCSEEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEFFCYDLSQQPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVIYKNNDVRLELSKLAKLGDPKMKIHGIVAFKCENVATLDPITFETPESFIALPRWTAKKTGSISFDFRTTEPNGLILFSHGKPRQQKDAKNPQVVKVDFFAIEMLDGHLYLLLEMGSGTIKIKALPKKVNDGEWYHVDFQRDGRSGTISVNTMRTPYVASGENEILDLDDDLYLGGLPENKEGLVFPTEVWTALLNYGFVGCIRDLFIDGQSKDIRQMAEIQNAAGVKPSCSKDDAKQCINNPCRNNGICRNGWNRYICDCSGTGYLGRSCEREATILSYDGTMFMKVQMPIVMHTEAEDVSLRFRSHRAYGVLMSTTSRDSADTLRLEMDAGRVKLTVNLDCIRINCNTSKGPESIFAGHNLNDNEWHTVRVFRRGKMIKLIVDELQPVTGQMSGDHTRLEFHNIETGIITERRYLSAVPSNFIGHLQSLTFNGMPYIDLCKNGDIEYCELNARFGYTNIIADPVTFKTKASYVTLTTLQAYISMHLFFQLKTTSTDGLILYNSGDGNDFIVVELVKGYIHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVRIDNKITTQSTAGARNLDLKNDLYIGGVTKDMYKGLPKLVSSKEGFQGCLASVDLNGRLPDLISDALFCSGQIERGCEGPSTTCQEDSCANQGVCLQQWDGFTCDCSMTSFSGPLCNDPGTTYIFGKGGGGLITYTWPPNDRPSTRADRLTVGFSTELKDAVLVRVDSSSGLGDYLQLHIDQGKIGVIFNVGTDDITIEESRAIVSDGKYHVVRFTRSGGNATLHLDNWPIIERYPPGNIDNERLAIARQRIPYRLGRVVDDWLLDKGRQLTIFNSQAAIKIGGKDQGRPFQGQLSGLYYNGLKVLNMAADNPNIKIEGSVRLVGEVPSSITTESSGISKQSEMSTSVMETTTTLATSTAGRGKPPTRELIGQPTDDLLVASAECPSDDEDIDPCEPSSANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017231..26017309,26314682..26314998,26316354..26316443,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27905968..27905994,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140108))
location: region:25979791-30140108:-1
so has part: feature:30139382-30140108:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27905968-27905994:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26316354-26316443:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017231-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30139382-30140108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27905968-27905994:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26316354-26316443:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26017231-26017309:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:25979791-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X4
translation: MAVDLKQGSYLLWMALLLGCLLDIGTSLEFSGDEGQWTRFPKWNACCESEMSFKMKTKNSNGLLLYIDDEGFCDFLELVIYEGKLRLRLSIFCSEHVVLHTDTRVDDGAWHHVIVRRNFKNTSLVVDDETKWVEAKSQRRDMTVLSSLFIGGIPPELHLAPLKLTLPTVKDQRPFHGQIIDIVVANEESAPDDSNLVTSGETTPSVCAKEDICQHGGICSVIDDEPVCDCTMTGFQGKDCSEEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEFFCYDLSQQPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVIYKNNDVRLELSKLAKLGDPKMKIHGIVAFKCENVATLDPITFETPESFIALPRWTAKKTGSISFDFRTTEPNGLILFSHGKPRQQKDAKNPQVVKVDFFAIEMLDGHLYLLLEMGSGTIKIKALPKKVNDGEWYHVDFQRDGRSGTISVNTMRTPYVASGENEILDLDDDLYLGGLPENKEGLVFPTEVWTALLNYGFVGCIRDLFIDGQSKDIRQMAEIQNAAGVKPSCSKDDAKQCINNPCRNNGICRNGWNRYICDCSGTGYLGRSCEREATILSYDGTMFMKVQMPIVMHTEAEDVSLRFRSHRAYGVLMSTTSRDSADTLRLEMDAGRVKLTVNLDCIRINCNTSKGPESIFAGHNLNDNEWHTVRVFRRGKMIKLIVDELQPVTGQMSGDHTRLEFHNIETGIITERRYLSAVPSNFIGHLQSLTFNGMPYIDLCKNGDIEYCELNARFGYTNIIADPVTFKTKASYVTLTTLQAYISMHLFFQLKTTSTDGLILYNSGDGNDFIVVELVKGYIHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVRIDNKITTQSTAGARNLDLKNDLYIGGVTKDMYKGLPKLVSSKEGFQGCLASVDLNGRLPDLISDALFCSGQIERGCEGPSTTCQEDSCANQGVCLQQWDGFTCDCSMTSFSGPLCNDPGTTYIFGKGGGGLITYTWPPNDRPSTRADRLTVGFSTELKDAVLVRVDSSSGLGDYLQLHIDQGKIGVIFNVGTDDITIEESRAIVSDGKYHVVRFTRSGGNATLHLDNWPIIERYPPGNIDNERLAIARQRIPYRLGRVVDDWLLDKGRQLTIFNSQAAIKIGGKDQGRPFQGQLSGLYYNGLKVLNMAADNPNIKIEGSVRLVGEVPSSITTESSGISKQSEMSTSVMETTTTLATSTAGRGKPPTRELIGQPTDDLLVASAECPSDDEDIDPCEPSSGGLANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017222..26017309,26314682..26314998,26316354..26316443,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27905968..27905994,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140108))
location: region:25979791-30140108:-1
so has part: feature:30139382-30140108:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27905968-27905994:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26316354-26316443:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30139382-30140108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27905968-27905994:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26316354-26316443:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:25979791-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X10
translation: MAVDLKQGSYLLWMALLLGCLLDIGTSLEFSGDEGQWTRFPKWNACCESEMSFKMKTKNSNGLLLYIDDEGFCDFLELVIYEGKLRLRLSIFCSEHVVLHTDTRVDDGAWHHVIVRRNFKNTSLVVDDETKWVEAKSQRRDMTVLSSLFIGGIPPELHLAPLKLTLPTVKDQRPFHGQIIDIVVANEESAPDDSNLVTSGETTPSVCAKEDICQHGGICSVIDDEPVCDCTMTGFQGKDCSEEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEFFCYDLSQQPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVIYKNNDVRLELSKLAKLGDPKMKIHGIVAFKCENVATLDPITFETPESFIALPRWTAKKTGSISFDFRTTEPNGLILFSHGKPRQQKDAKNPQVVKVDFFAIEMLDGHLYLLLEMGSGTIKIKALPKKVNDGEWYHVDFQRDGRSGTISVNTMRTPYVASGENEILDLDDDLYLGGLPENKEGLVFPTEVWTALLNYGFVGCIRDLFIDGQSKDIRQMAEIQNAAGVKPSCSKDDAKQCINNPCRNNGICRNGWNRYICDCSGTGYLGRSCEREATILSYDGTMFMKVQMPIVMHTEAEDVSLRFRSHRAYGVLMSTTSRDSADTLRLEMDAGRVKLTVNLGKGPESIFAGHNLNDNEWHTVRVFRRGKMIKLIVDELQPVTGQMSGDHTRLEFHNIETGIITERRYLSAVPSNFIGHLQSLTFNGMPYIDLCKNGDIEYCELNARFGYTNIIADPVTFKTKASYVTLTTLQAYISMHLFFQLKTTSTDGLILYNSGDGNDFIVVELVKGYIHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVRIDNKITTQSTAGARNLDLKNDLYIGGVTKDMYKGLPKLVSSKEGFQGCLASVDLNGRLPDLISDALFCSGQIERGCEGPSTTCQEDSCANQGVCLQQWDGFTCDCSMTSFSGPLCNDPGTTYIFGKGGGGLITYTWPPNDRPSTRADRLTVGFSTELKDAVLVRVDSSSGLGDYLQLHIDQGKIGVIFNVGTDDITIEESRAIVSDGKYHVVRFTRSGGNATLHLDNWPIIERYPPGRQLTIFNSQAAIKIGGKDQGRPFQGQLSGLYYNGLKVLNMAADNPNIKIEGSVRLVGEVPSSITTESSGISKQSEMSTSVMETTTTLATSTAGRGKPPTRELIGQPTDDLLVASAECPSDDEDIDPCEPSSANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017231..26017309,26314682..26314998,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28785810..28785833,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140108))
location: region:25979791-30140108:-1
so has part: feature:30139382-30140108:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28785810-28785833:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017231-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30139382-30140108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28785810-28785833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26017231-26017309:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:25979791-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X9
translation: MAVDLKQGSYLLWMALLLGCLLDIGTSLEFSGDEGQWTRFPKWNACCESEMSFKMKTKNSNGLLLYIDDEGFCDFLELVIYEGKLRLRLSIFCSEHVVLHTDTRVDDGAWHHVIVRRNFKNTSLVVDDETKWVEAKSQRRDMTVLSSLFIGGIPPELHLAPLKLTLPTVKDQRPFHGQIIDIVVANEESAPDDSNLVTSGETTPSVCAKEDICQHGGICSVIDDEPVCDCTMTGFQGKDCSEEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEFFCYDLSQQPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVIYKNNDVRLELSKLAKLGDPKMKIHGIVAFKCENVATLDPITFETPESFIALPRWTAKKTGSISFDFRTTEPNGLILFSHGKPRQQKDAKNPQVVKVDFFAIEMLDGHLYLLLEMGSGTIKIKALPKKVNDGEWYHVDFQRDGRSGTISVNTMRTPYVASGENEILDLDDDLYLGGLPENKEGLVFPTEVWTALLNYGFVGCIRDLFIDGQSKDIRQMAEIQNAAGVKPSCSKDDAKQCINNPCRNNGICRNGWNRYICDCSGTGYLGRSCEREATILSYDGTMFMKVQMPIVMHTEAEDVSLRFRSHRAYGVLMSTTSRDSADTLRLEMDAGRVKLTVNLGKGPESIFAGHNLNDNEWHTVRVFRRGKMIKLIVDELQPVTGQMSGDHTRLEFHNIETGIITERRYLSAVPSNFIGHLQSLTFNGMPYIDLCKNGDIEYCELNARFGYTNIIADPVTFKTKASYVTLTTLQAYISMHLFFQLKTTSTDGLILYNSGDGNDFIVVELVKGYIHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVRIDNKITTQSTAGARNLDLKNDLYIGGVTKDMYKGLPKLVSSKEGFQGCLASVDLNGRLPDLISDALFCSGQIERGCEGPSTTCQEDSCANQGVCLQQWDGFTCDCSMTSFSGPLCNDPGTTYIFGKGGGGLITYTWPPNDRPSTRADRLTVGFSTELKDAVLVRVDSSSGLGDYLQLHIDQGKIGVIFNVGTDDITIEESRAIVSDGKYHVVRFTRSGGNATLHLDNWPIIERYPPGRQLTIFNSQAAIKIGGKDQGRPFQGQLSGLYYNGLKVLNMAADNPNIKIEGSVRLVGEVPSSITTESSGISKQSEMSTSVMETTTTLATSTAGRGKPPTRELIGQPTDDLLVASAECPSDDEDIDPCEPSSGGLANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017222..26017309,26314682..26314998,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28785810..28785833,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140108))
location: region:25979791-30140108:-1
so has part: feature:30139382-30140108:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28785810-28785833:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30139382-30140108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28785810-28785833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:25979791-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X5
translation: MAVDLKQGSYLLWMALLLGCLLDIGTSLEFSGDEGQWTRFPKWNACCESEMSFKMKTKNSNGLLLYIDDEGFCDFLELVIYEGKLRLRLSIFCSEHVVLHTDTRVDDGAWHHVIVRRNFKNTSLVVDDETKWVEAKSQRRDMTVLSSLFIGGIPPELHLAPLKLTLPTVKDQRPFHGQIIDIVVANEESAPDDSNLVTSGETTPSVCAKEDICQHGGICSVIDDEPVCDCTMTGFQGKDCSEEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEFFCYDLSQQPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVIYKNNDVRLELSKLAKLGDPKMKIHGIVAFKCENVATLDPITFETPESFIALPRWTAKKTGSISFDFRTTEPNGLILFSHGKPRQQKDAKNPQVVKVDFFAIEMLDGHLYLLLEMGSGTIKIKALPKKVNDGEWYHVDFQRDGRSGTISVNTMRTPYVASGENEILDLDDDLYLGGLPENKEGLVFPTEVWTALLNYGFVGCIRDLFIDGQSKDIRQMAEIQNAAGVKPSCSKDDAKQCINNPCRNNGICRNGWNRYICDCSGTGYLGRSCEREATILSYDGTMFMKVQMPIVMHTEAEDVSLRFRSHRAYGVLMSTTSRDSADTLRLEMDAGRVKLTVNLGKGPESIFAGHNLNDNEWHTVRVFRRGKMIKLIVDELQPVTGQMSGDHTRLEFHNIETGIITERRYLSAVPSNFIGHLQSLTFNGMPYIDLCKNGDIEYCELNARFGYTNIIADPVTFKTKASYVTLTTLQAYISMHLFFQLKTTSTDGLILYNSGDGNDFIVVELVKGYIHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVRIDNKITTQSTAGARNLDLKNDLYIGGVTKDMYKGLPKLVSSKEGFQGCLASVDLNGRLPDLISDALFCSGQIERGCEGPSTTCQEDSCANQGVCLQQWDGFTCDCSMTSFSGPLCNDPGTTYIFGKGGGGLITYTWPPNDRPSTRADRLTVGFSTELKDAVLVRVDSSSGLGDYLQLHIDQGKIGVIFNVGTDDITIEESRAIVSDGKYHVVRFTRSGGNATLHLDNWPIIERYPPGNIDNERLAIARQRIPYRLGRVVDDWLLDKGRQLTIFNSQAAIKIGGKDQGRPFQGQLSGLYYNGLKVLNMAADNPNIKIEGSVRLVGEVPSSITTESSGISKQSEMSTSVMETTTTLATSTAGRGKPPTRELIGQPTDDLLVASAECPSDDEDIDPCEPSSGGLANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017222..26017309,26314682..26314998,26316354..26316443,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28785810..28785833,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140108))
location: region:25979791-30140108:-1
so has part: feature:30139382-30140108:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28785810-28785833:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26316354-26316443:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30139382-30140108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28785810-28785833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26316354-26316443:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:25979791-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X8
translation: MAVDLKQGSYLLWMALLLGCLLDIGTSLEFSGDEGQWTRFPKWNACCESEMSFKMKTKNSNGLLLYIDDEGFCDFLELVIYEGKLRLRLSIFCSEHVVLHTDTRVDDGAWHHVIVRRNFKNTSLVVDDETKWVEAKSQRRDMTVLSSLFIGGIPPELHLAPLKLTLPTVKDQRPFHGQIIDIVVANEESAPDDSNLVTSGETTPSVCAKEDICQHGGICSVIDDEPVCDCTMTGFQGKDCSEEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEFFCYDLSQQPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVIYKNNDVRLELSKLAKLGDPKMKIHGIVAFKCENVATLDPITFETPESFIALPRWTAKKTGSISFDFRTTEPNGLILFSHGKPRQQKDAKNPQVVKVDFFAIEMLDGHLYLLLEMGSGTIKIKALPKKVNDGEWYHVDFQRDGRSGTISVNTMRTPYVASGENEILDLDDDLYLGGLPENKEGLVFPTEVWTALLNYGFVGCIRDLFIDGQSKDIRQMAEIQNAAGVKPSCSKDDAKQCINNPCRNNGICRNGWNRYICDCSGTGYLGRSCEREATILSYDGTMFMKVQMPIVMHTEAEDVSLRFRSHRAYGVLMSTTSRDSADTLRLEMDAGRVKLTVNLDCIRINCNTSKGPESIFAGHNLNDNEWHTVRVFRRGKMIKLIVDELQPVTGQMSGDHTRLEFHNIETGIITERRYLSAVPSNFIGHLQSLTFNGMPYIDLCKNGDIEYCELNARFGYTNIIADPVTFKTKASYVTLTTLQAYISMHLFFQLKTTSTDGLILYNSGDGNDFIVVELVKGYIHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVRIDNKITTQSTAGARNLDLKNDLYIGGVTKDMYKGLPKLVSSKEGFQGCLASVDLNGRLPDLISDALFCSGQIERGCEGPSTTCQEDSCANQGVCLQQWDGFTCDCSMTSFSGPLCNDPGTTYIFGKGGGGLITYTWPPNDRPSTRADRLTVGFSTELKDAVLVRVDSSSGLGDYLQLHIDQGKIGVIFNVGTDDITIEESRAIVSDGKYHVVRFTRSGGNATLHLDNWPIIERYPPGRQLTIFNSQAAIKIGGKDQGRPFQGQLSGLYYNGLKVLNMAADNPNIKIEGSVRLVGEVPSSITTESSGISKQSEMSTSVMETTTTLATSTAGRGKPPTRELIGQPTDDLLVASAECPSDDEDIDPCEPSSANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017231..26017309,26314682..26314998,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27905968..27905994,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28785810..28785833,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140108))
location: region:25979791-30140108:-1
so has part: feature:30139382-30140108:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28785810-28785833:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27905968-27905994:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017231-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30139382-30140108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28785810-28785833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27905968-27905994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26017231-26017309:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:25979791-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X7
translation: MAVDLKQGSYLLWMALLLGCLLDIGTSLEFSGDEGQWTRFPKWNACCESEMSFKMKTKNSNGLLLYIDDEGFCDFLELVIYEGKLRLRLSIFCSEHVVLHTDTRVDDGAWHHVIVRRNFKNTSLVVDDETKWVEAKSQRRDMTVLSSLFIGGIPPELHLAPLKLTLPTVKDQRPFHGQIIDIVVANEESAPDDSNLVTSGETTPSVCAKEDICQHGGICSVIDDEPVCDCTMTGFQGKDCSEEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEFFCYDLSQQPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVIYKNNDVRLELSKLAKLGDPKMKIHGIVAFKCENVATLDPITFETPESFIALPRWTAKKTGSISFDFRTTEPNGLILFSHGKPRQQKDAKNPQVVKVDFFAIEMLDGHLYLLLEMGSGTIKIKALPKKVNDGEWYHVDFQRDGRSGTISVNTMRTPYVASGENEILDLDDDLYLGGLPENKEGLVFPTEVWTALLNYGFVGCIRDLFIDGQSKDIRQMAEIQNAAGVKPSCSKDDAKQCINNPCRNNGICRNGWNRYICDCSGTGYLGRSCEREATILSYDGTMFMKVQMPIVMHTEAEDVSLRFRSHRAYGVLMSTTSRDSADTLRLEMDAGRVKLTVNLDCIRINCNTSKGPESIFAGHNLNDNEWHTVRVFRRGKMIKLIVDELQPVTGQMSGDHTRLEFHNIETGIITERRYLSAVPSNFIGHLQSLTFNGMPYIDLCKNGDIEYCELNARFGYTNIIADPVTFKTKASYVTLTTLQAYISMHLFFQLKTTSTDGLILYNSGDGNDFIVVELVKGYIHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVRIDNKITTQSTAGARNLDLKNDLYIGGVTKDMYKGLPKLVSSKEGFQGCLASVDLNGRLPDLISDALFCSGQIERGCEGPSTTCQEDSCANQGVCLQQWDGFTCDCSMTSFSGPLCNDPGTTYIFGKGGGGLITYTWPPNDRPSTRADRLTVGFSTELKDAVLVRVDSSSGLGDYLQLHIDQGKIGVIFNVGTDDITIEESRAIVSDGKYHVVRFTRSGGNATLHLDNWPIIERYPPGRQLTIFNSQAAIKIGGKDQGRPFQGQLSGLYYNGLKVLNMAADNPNIKIEGSVRLVGEVPSSITTESSGISKQSEMSTSVMETTTTLATSTAGRGKPPTRELIGQPTDDLLVASAECPSDDEDIDPCEPSSGGLANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017222..26017309,26314682..26314998,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27905968..27905994,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28785810..28785833,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140108))
location: region:25979791-30140108:-1
so has part: feature:30139382-30140108:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28785810-28785833:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27905968-27905994:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30139382-30140108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28785810-28785833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27905968-27905994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:25979791-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X2
translation: MAVDLKQGSYLLWMALLLGCLLDIGTSLEFSGDEGQWTRFPKWNACCESEMSFKMKTKNSNGLLLYIDDEGFCDFLELVIYEGKLRLRLSIFCSEHVVLHTDTRVDDGAWHHVIVRRNFKNTSLVVDDETKWVEAKSQRRDMTVLSSLFIGGIPPELHLAPLKLTLPTVKDQRPFHGQIIDIVVANEESAPDDSNLVTSGETTPSVCAKEDICQHGGICSVIDDEPVCDCTMTGFQGKDCSEEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEFFCYDLSQQPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVIYKNNDVRLELSKLAKLGDPKMKIHGIVAFKCENVATLDPITFETPESFIALPRWTAKKTGSISFDFRTTEPNGLILFSHGKPRQQKDAKNPQVVKVDFFAIEMLDGHLYLLLEMGSGTIKIKALPKKVNDGEWYHVDFQRDGRSGTISVNTMRTPYVASGENEILDLDDDLYLGGLPENKEGLVFPTEVWTALLNYGFVGCIRDLFIDGQSKDIRQMAEIQNAAGVKPSCSKDDAKQCINNPCRNNGICRNGWNRYICDCSGTGYLGRSCEREATILSYDGTMFMKVQMPIVMHTEAEDVSLRFRSHRAYGVLMSTTSRDSADTLRLEMDAGRVKLTVNLDCIRINCNTSKGPESIFAGHNLNDNEWHTVRVFRRGKMIKLIVDELQPVTGQMSGDHTRLEFHNIETGIITERRYLSAVPSNFIGHLQSLTFNGMPYIDLCKNGDIEYCELNARFGYTNIIADPVTFKTKASYVTLTTLQAYISMHLFFQLKTTSTDGLILYNSGDGNDFIVVELVKGYIHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVRIDNKITTQSTAGARNLDLKNDLYIGGVTKDMYKGLPKLVSSKEGFQGCLASVDLNGRLPDLISDALFCSGQIERGCEGPSTTCQEDSCANQGVCLQQWDGFTCDCSMTSFSGPLCNDPGTTYIFGKGGGGLITYTWPPNDRPSTRADRLTVGFSTELKDAVLVRVDSSSGLGDYLQLHIDQGKIGVIFNVGTDDITIEESRAIVSDGKYHVVRFTRSGGNATLHLDNWPIIERYPPGNIDNERLAIARQRIPYRLGRVVDDWLLDKGRQLTIFNSQAAIKIGGKDQGRPFQGQLSGLYYNGLKVLNMAADNPNIKIEGSVRLVGEVPSSITTESSGISKQSEMSTSVMETTTTLATSTAGRGKPPTRELIGQPTDDLLVASAECPSDDEDIDPCEPSSANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017231..26017309,26314682..26314998,26316354..26316443,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27905968..27905994,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28785810..28785833,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140108))
location: region:25979791-30140108:-1
so has part: feature:30139382-30140108:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28785810-28785833:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27905968-27905994:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26316354-26316443:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017231-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30139382-30140108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28785810-28785833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27905968-27905994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26316354-26316443:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:26017231-26017309:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:25979791-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X1
translation: MAVDLKQGSYLLWMALLLGCLLDIGTSLEFSGDEGQWTRFPKWNACCESEMSFKMKTKNSNGLLLYIDDEGFCDFLELVIYEGKLRLRLSIFCSEHVVLHTDTRVDDGAWHHVIVRRNFKNTSLVVDDETKWVEAKSQRRDMTVLSSLFIGGIPPELHLAPLKLTLPTVKDQRPFHGQIIDIVVANEESAPDDSNLVTSGETTPSVCAKEDICQHGGICSVIDDEPVCDCTMTGFQGKDCSEEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEFFCYDLSQQPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVIYKNNDVRLELSKLAKLGDPKMKIHGIVAFKCENVATLDPITFETPESFIALPRWTAKKTGSISFDFRTTEPNGLILFSHGKPRQQKDAKNPQVVKVDFFAIEMLDGHLYLLLEMGSGTIKIKALPKKVNDGEWYHVDFQRDGRSGTISVNTMRTPYVASGENEILDLDDDLYLGGLPENKEGLVFPTEVWTALLNYGFVGCIRDLFIDGQSKDIRQMAEIQNAAGVKPSCSKDDAKQCINNPCRNNGICRNGWNRYICDCSGTGYLGRSCEREATILSYDGTMFMKVQMPIVMHTEAEDVSLRFRSHRAYGVLMSTTSRDSADTLRLEMDAGRVKLTVNLDCIRINCNTSKGPESIFAGHNLNDNEWHTVRVFRRGKMIKLIVDELQPVTGQMSGDHTRLEFHNIETGIITERRYLSAVPSNFIGHLQSLTFNGMPYIDLCKNGDIEYCELNARFGYTNIIADPVTFKTKASYVTLTTLQAYISMHLFFQLKTTSTDGLILYNSGDGNDFIVVELVKGYIHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVRIDNKITTQSTAGARNLDLKNDLYIGGVTKDMYKGLPKLVSSKEGFQGCLASVDLNGRLPDLISDALFCSGQIERGCEGPSTTCQEDSCANQGVCLQQWDGFTCDCSMTSFSGPLCNDPGTTYIFGKGGGGLITYTWPPNDRPSTRADRLTVGFSTELKDAVLVRVDSSSGLGDYLQLHIDQGKIGVIFNVGTDDITIEESRAIVSDGKYHVVRFTRSGGNATLHLDNWPIIERYPPGNIDNERLAIARQRIPYRLGRVVDDWLLDKGRQLTIFNSQAAIKIGGKDQGRPFQGQLSGLYYNGLKVLNMAADNPNIKIEGSVRLVGEVPSSITTESSGISKQSEMSTSVMETTTTLATSTAGRGKPPTRELIGQPTDDLLVASAECPSDDEDIDPCEPSSGGLANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017222..26017309,26314682..26314998,26316354..26316443,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27905968..27905994,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28785810..28785833,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140108))
location: region:25979791-30140108:-1
so has part: feature:30139382-30140108:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28785810-28785833:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27905968-27905994:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26316354-26316443:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30139382-30140108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28785810-28785833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27905968-27905994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26316354-26316443:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:25979791-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X1
translation: MAVDLKQGSYLLWMALLLGCLLDIGTSLEFSGDEGQWTRFPKWNACCESEMSFKMKTKNSNGLLLYIDDEGFCDFLELVIYEGKLRLRLSIFCSEHVVLHTDTRVDDGAWHHVIVRRNFKNTSLVVDDETKWVEAKSQRRDMTVLSSLFIGGIPPELHLAPLKLTLPTVKDQRPFHGQIIDIVVANEESAPDDSNLVTSGETTPSVCAKEDICQHGGICSVIDDEPVCDCTMTGFQGKDCSEEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEFFCYDLSQQPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVIYKNNDVRLELSKLAKLGDPKMKIHGIVAFKCENVATLDPITFETPESFIALPRWTAKKTGSISFDFRTTEPNGLILFSHGKPRQQKDAKNPQVVKVDFFAIEMLDGHLYLLLEMGSGTIKIKALPKKVNDGEWYHVDFQRDGRSGTISVNTMRTPYVASGENEILDLDDDLYLGGLPENKEGLVFPTEVWTALLNYGFVGCIRDLFIDGQSKDIRQMAEIQNAAGVKPSCSKDDAKQCINNPCRNNGICRNGWNRYICDCSGTGYLGRSCEREATILSYDGTMFMKVQMPIVMHTEAEDVSLRFRSHRAYGVLMSTTSRDSADTLRLEMDAGRVKLTVNLDCIRINCNTSKGPESIFAGHNLNDNEWHTVRVFRRGKMIKLIVDELQPVTGQMSGDHTRLEFHNIETGIITERRYLSAVPSNFIGHLQSLTFNGMPYIDLCKNGDIEYCELNARFGYTNIIADPVTFKTKASYVTLTTLQAYISMHLFFQLKTTSTDGLILYNSGDGNDFIVVELVKGYIHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVRIDNKITTQSTAGARNLDLKNDLYIGGVTKDMYKGLPKLVSSKEGFQGCLASVDLNGRLPDLISDALFCSGQIERGCEGPSTTCQEDSCANQGVCLQQWDGFTCDCSMTSFSGPLCNDPGTTYIFGKGGGGLITYTWPPNDRPSTRADRLTVGFSTELKDAVLVRVDSSSGLGDYLQLHIDQGKIGVIFNVGTDDITIEESRAIVSDGKYHVVRFTRSGGNATLHLDNWPIIERYPPGNIDNERLAIARQRIPYRLGRVVDDWLLDKGRQLTIFNSQAAIKIGGKDQGRPFQGQLSGLYYNGLKVLNMAADNPNIKIEGSVRLVGEVPSSITTESSGISKQSEMSTSVMETTTTLATSTAGRGKPPTRELIGQPTDDLLVASAECPSDDEDIDPCEPSSGGLANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017222..26017309,26314682..26314998,26316354..26316443,26356986..26357157,26653335..26653519,27287477..27287596,27374187..27374360,27402116..27402306,27411596..27411977,27545882..27546004,27905968..27905994,27909083..27909286,28086920..28087303,28357388..28357826,28784701..28784862,28785810..28785833,28808707..28809008,29667705..29667716,29668468..29668497,29672507..29672524,30139382..30140108))
location: region:25979791-30140108:-1
so has part: feature:30139382-30140108:-1:exon
so has part: feature:29672507-29672524:-1:exon
so has part: feature:29668468-29668497:-1:exon
so has part: feature:29667705-29667716:-1:exon
so has part: feature:28808707-28809008:-1:exon
so has part: feature:28785810-28785833:-1:exon
so has part: feature:28784701-28784862:-1:exon
so has part: feature:28357388-28357826:-1:exon
so has part: feature:28086920-28087303:-1:exon
so has part: feature:27909083-27909286:-1:exon
so has part: feature:27905968-27905994:-1:exon
so has part: feature:27545882-27546004:-1:exon
so has part: feature:27411596-27411977:-1:exon
so has part: feature:27402116-27402306:-1:exon
so has part: feature:27374187-27374360:-1:exon
so has part: feature:27287477-27287596:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26316354-26316443:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30139382-30140108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29672507-29672524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29668468-29668497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29667705-29667716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28808707-28809008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28785810-28785833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:28784701-28784862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28357388-28357826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28086920-28087303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27909083-27909286:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:27905968-27905994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27545882-27546004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:27411596-27411977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:27402116-27402306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:27374187-27374360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:27287477-27287596:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26316354-26316443:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:25979791-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X16
translation: MKLGYSEVLYARCSLLSDSGIIMYQPSVWNSRTEPVPCLVRLALWIVPLTFSCVLGMAWGVATLGSHHIHHFHGSKHHAAPIAIYRSPASLRGGHAGTTYIFGKGGGGLITYTWPPNDRPSTRADRLTVGFSTELKDAVLVRVDSSSGLGDYLQLHIDQGKIGVIFNVGTDDITIEESRAIVSDGKYHVVRFTRSGGNATLHLDNWPIIERYPPGRQLTIFNSQAAIKIGGKDQGRPFQGQLSGLYYNGLKVLNMAADNPNIKIEGSVRLVGEVPSSITTESSGISKQSEMSTSVMETTTTLATSTAGRGKPPTRELIGQPTDDLLVASAECPSDDEDIDPCEPSSANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017231..26017309,26314682..26314998,26356986..26357157,26653335..26653519,26860407..26860692))
location: region:25979791-26860692:-1
so has part: feature:26860407-26860692:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017231-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910829.1
type: Protein
SIO_000068: ncbiprotein

position:26860692:-1
position: 26860692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26860407-26860692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26017231-26017309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:25979791-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X15
translation: MKLGYSEVLYARCSLLSDSGIIMYQPSVWNSRTEPVPCLVRLALWIVPLTFSCVLGMAWGVATLGSHHIHHFHGSKHHAAPIAIYRSPASLRGGHAGTTYIFGKGGGGLITYTWPPNDRPSTRADRLTVGFSTELKDAVLVRVDSSSGLGDYLQLHIDQGKIGVIFNVGTDDITIEESRAIVSDGKYHVVRFTRSGGNATLHLDNWPIIERYPPGRQLTIFNSQAAIKIGGKDQGRPFQGQLSGLYYNGLKVLNMAADNPNIKIEGSVRLVGEVPSSITTESSGISKQSEMSTSVMETTTTLATSTAGRGKPPTRELIGQPTDDLLVASAECPSDDEDIDPCEPSSGGLANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017222..26017309,26314682..26314998,26356986..26357157,26653335..26653519,26860407..26860692))
location: region:25979791-26860692:-1
so has part: feature:26860407-26860692:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26860407-26860692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:25979791-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X14
translation: MKLGYSEVLYARCSLLSDSGIIMYQPSVWNSRTEPVPCLVRLALWIVPLTFSCVLGMAWGVATLGSHHIHHFHGSKHHAAPIAIYRSPASLRGGHAGTTYIFGKGGGGLITYTWPPNDRPSTRADRLTVGFSTELKDAVLVRVDSSSGLGDYLQLHIDQGKIGVIFNVGTDDITIEESRAIVSDGKYHVVRFTRSGGNATLHLDNWPIIERYPPGNIDNERLAIARQRIPYRLGRVVDDWLLDKGRQLTIFNSQAAIKIGGKDQGRPFQGQLSGLYYNGLKVLNMAADNPNIKIEGSVRLVGEVPSSITTESSGISKQSEMSTSVMETTTTLATSTAGRGKPPTRELIGQPTDDLLVASAECPSDDEDIDPCEPSSANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017231..26017309,26314682..26314998,26316354..26316443,26356986..26357157,26653335..26653519,26860407..26860692))
location: region:25979791-26860692:-1
so has part: feature:26860407-26860692:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26316354-26316443:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017231-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26860407-26860692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26316354-26316443:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26017231-26017309:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25979791-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X13
translation: MKLGYSEVLYARCSLLSDSGIIMYQPSVWNSRTEPVPCLVRLALWIVPLTFSCVLGMAWGVATLGSHHIHHFHGSKHHAAPIAIYRSPASLRGGHAGTTYIFGKGGGGLITYTWPPNDRPSTRADRLTVGFSTELKDAVLVRVDSSSGLGDYLQLHIDQGKIGVIFNVGTDDITIEESRAIVSDGKYHVVRFTRSGGNATLHLDNWPIIERYPPGNIDNERLAIARQRIPYRLGRVVDDWLLDKGRQLTIFNSQAAIKIGGKDQGRPFQGQLSGLYYNGLKVLNMAADNPNIKIEGSVRLVGEVPSSITTESSGISKQSEMSTSVMETTTTLATSTAGRGKPPTRELIGQPTDDLLVASAECPSDDEDIDPCEPSSGGLANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017222..26017309,26314682..26314998,26316354..26316443,26356986..26357157,26653335..26653519,26860407..26860692))
location: region:25979791-26860692:-1
so has part: feature:26860407-26860692:-1:exon
so has part: feature:26653335-26653519:-1:exon
so has part: feature:26356986-26357157:-1:exon
so has part: feature:26316354-26316443:-1:exon
so has part: feature:26314682-26314998:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26860407-26860692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26653335-26653519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26356986-26357157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26316354-26316443:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26314682-26314998:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25979791-25980095:-1:exon

NRXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: NRXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexin-1 isoform X17
translation: MDMRWHCENSQPTDDLLVASAECPSDDEDIDPCEPSSGGLANPTRSPGRDFPGPAEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPNSAKSSSKNKKNKDKEYYV
SIO_010081: NRXN1
subclass of: SO_0000673
so part of: NRXN1
location: complement(join(25979791..25980095,26017222..26017309,26093555..26093587))
location: region:25979791-26093587:-1
so has part: feature:26093555-26093587:-1:exon
so has part: feature:26017222-26017309:-1:exon
so has part: feature:25979791-25980095:-1:exon

XP_043910835.1
type: Protein
SIO_000068: ncbiprotein

position:26093587:-1
position: 26093587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26093555-26093587:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26017222-26017309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25979791-25980095:-1:exon

TRNAL-UAA
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: TRNAL-UAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 26390543..26390625
location: region:26390543-26390625:1
so has part: feature:26390543-26390625:1:exon
subclass of: SO_0000663

122792691
type: Gene
SIO_000068: ncbigene

position:26390543:1
position: 26390543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26390625:1
position: 26390625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26390543-26390625:1:exon

TRNAL-UAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
gene: TRNAL-UAA
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA leucine (anticodon UAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:26390576..26390578,aa:Leu,seq:taa)
SIO_010081: TRNAL-UAA
subclass of: SO_0000673
so part of: TRNAL-UAA
location: 26390543..26390625
location: region:26390543-26390625:1
so has part: feature:26390543-26390625:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26390543-26390625:1:exon

LOC122792331
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122792331
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(39911928..40013697)
location: region:39911928-40013697:-1
so has part: feature:39911928-40013697:-1:exon

122792331
type: Gene
SIO_000068: ncbigene

position:39911928:-1
position: 39911928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40013697:-1
position: 40013697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39911928-40013697:-1:exon

LOC122792331
type: Exon
subclass of: SO_0000147
RO_0002162: 7888
gene: LOC122792331
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins
pseudo: true
SIO_010081: LOC122792331
subclass of: SO_0000673
so part of: LOC122792331
location: complement(39911928..39912888)
location: region:39911928-39912888:-1
so has part: feature:39911928-39912888:-1:exon

position:39912888:-1
position: 39912888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39911928-39912888:-1:exon

LOC122792331
type: Exon
subclass of: SO_0000147
RO_0002162: 7888
gene: LOC122792331
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins
pseudo: true
SIO_010081: LOC122792331
subclass of: SO_0000673
so part of: LOC122792331
location: complement(40013058..40013697)
location: region:40013058-40013697:-1
so has part: feature:40013058-40013697:-1:exon

position:40013058:-1
position: 40013058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40013058-40013697:-1:exon

TRNAR-CCU
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: TRNAR-CCU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 42161856..42161928
location: region:42161856-42161928:1
so has part: feature:42161856-42161928:1:exon
subclass of: SO_0000663

122792642
type: Gene
SIO_000068: ncbigene

position:42161856:1
position: 42161856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42161928:1
position: 42161928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42161856-42161928:1:exon

TRNAR-CCU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
gene: TRNAR-CCU
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA arginine (anticodon CCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:42161889..42161891,aa:Arg,seq:cct)
SIO_010081: TRNAR-CCU
subclass of: SO_0000673
so part of: TRNAR-CCU
location: 42161856..42161928
location: region:42161856-42161928:1
so has part: feature:42161856-42161928:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42161856-42161928:1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 46756980..46757051
location: region:46756980-46757051:1
so has part: feature:46756980-46757051:1:exon
subclass of: SO_0000663

122792646
type: Gene
SIO_000068: ncbigene

position:46756980:1
position: 46756980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46757051:1
position: 46757051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46756980-46757051:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:46757012..46757014,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 46756980..46757051
location: region:46756980-46757051:1
so has part: feature:46756980-46757051:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46756980-46757051:1:exon

TRNAR-CCU
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: TRNAR-CCU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 49359501..49359582
location: region:49359501-49359582:1
so has part: feature:49359501-49359582:1:exon
subclass of: SO_0000663

122792647
type: Gene
SIO_000068: ncbigene

position:49359501:1
position: 49359501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49359582:1
position: 49359582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49359501-49359582:1:exon

TRNAR-CCU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
gene: TRNAR-CCU
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA arginine (anticodon CCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:49359534..49359536,aa:Arg,seq:cct)
SIO_010081: TRNAR-CCU
subclass of: SO_0000673
so part of: TRNAR-CCU
location: join(49359501..49359537,49359547..49359582)
location: region:49359501-49359582:1
so has part: feature:49359501-49359537:1:exon
so has part: feature:49359547-49359582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49359501-49359537:1:exon

position:49359537:1
position: 49359537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49359547-49359582:1:exon

position:49359547:1
position: 49359547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 55894491..55894563
location: region:55894491-55894563:1
so has part: feature:55894491-55894563:1:exon
subclass of: SO_0000663

122792648
type: Gene
SIO_000068: ncbigene

position:55894491:1
position: 55894491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55894563:1
position: 55894563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55894491-55894563:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:55894524..55894526,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 55894491..55894563
location: region:55894491-55894563:1
so has part: feature:55894491-55894563:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55894491-55894563:1:exon

LOC122792628
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122792628
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 57288783..57288937
location: region:57288783-57288937:1
so has part: feature:57288783-57288937:1:exon

122792628
type: Gene
SIO_000068: ncbigene

position:57288783:1
position: 57288783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57288937:1
position: 57288937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57288783-57288937:1:exon

LOC122792628
type: Exon
subclass of: SO_0000147
RO_0002162: 7888
gene: LOC122792628
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC122792628
subclass of: SO_0000673
so part of: LOC122792628
location: 57288783..57288937
location: region:57288783-57288937:1
so has part: feature:57288783-57288937:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57288783-57288937:1:exon

FANCL
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: FANCL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 61642671..63604188
location: region:61642671-63604188:1
so has part: feature:61642671-63604188:1:exon
subclass of: SO_0000010

122788011
type: Gene
SIO_000068: ncbigene

position:61642671:1
position: 61642671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63604188:1
position: 63604188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61642671-63604188:1:exon

FANCL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: FANCL
product: FA complementation group L
experiment: COORDINATES: polyA evidence [ECO:0006239]
inference: similar to RNA sequence (same species):INSD:GGXP01073918.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 98 bases not found in genome assembly
transcript id: XM_044054938.1
SIO_010081: FANCL
subclass of: SO_0000673
so part of: FANCL
location: join(61642671..61642892,61758005..61758063,61974924..61974984,62023019..>62023075,<62442171..62442267,62527578..62527646,62851442..62851592,62991482..62991565,63204810..63204855,63204937..63205018,63282158..63282274,63459889..63459960,63603998..63604188)
location: region:61642671-63604188:1
so has part: feature:61642671-61642892:1:exon
so has part: feature:61758005-61758063:1:exon
so has part: feature:61974924-61974984:1:exon
so has part: feature:62023019-62023075:1:exon
so has part: feature:62442171-62442267:1:exon
so has part: feature:62527578-62527646:1:exon
so has part: feature:62851442-62851592:1:exon
so has part: feature:62991482-62991565:1:exon
so has part: feature:63204810-63204855:1:exon
so has part: feature:63204937-63205018:1:exon
so has part: feature:63282158-63282274:1:exon
so has part: feature:63459889-63459960:1:exon
so has part: feature:63603998-63604188:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61642671-61642892:1:exon

position:61642892:1
position: 61642892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:61758005-61758063:1:exon

position:61758005:1
position: 61758005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61758063:1
position: 61758063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:61974924-61974984:1:exon

position:61974924:1
position: 61974924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61974984:1
position: 61974984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:62023019-62023075:1:exon

position:62023019:1
position: 62023019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62023075:1
position: 62023075
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 5
SIO_000628: feature:62442171-62442267:1:exon

position:62442171:1
position: 62442171
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:62442267:1
position: 62442267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:62527578-62527646:1:exon

position:62527578:1
position: 62527578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62527646:1
position: 62527646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:62851442-62851592:1:exon

position:62851442:1
position: 62851442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62851592:1
position: 62851592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:62991482-62991565:1:exon

position:62991482:1
position: 62991482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62991565:1
position: 62991565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:63204810-63204855:1:exon

position:63204810:1
position: 63204810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63204855:1
position: 63204855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:63204937-63205018:1:exon

position:63204937:1
position: 63204937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63205018:1
position: 63205018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:63282158-63282274:1:exon

position:63282158:1
position: 63282158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63282274:1
position: 63282274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:63459889-63459960:1:exon

position:63459889:1
position: 63459889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63459960:1
position: 63459960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:63603998-63604188:1:exon

position:63603998:1
position: 63603998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FANCL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: FANCL
inference: similar to RNA sequence (same species):INSD:GGXP01073918.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 98 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase FANCL
translation: MADELSMFRQCPLLLPQNRERTVYDGFITVQDRDFRLRILLPSVHDVKHARLQCSWQLKHVLKGYQQILKQRLQHCSDLVSFMLELKTVLEVALKNRRELYVPPPPRYYLQLINEIESLGWDKLVYIDTEFSTIKLKAEDSGSRVHLITIKLKPKYPVDAPDCLVDFPVPFTVPWTPQGSLIYIHSQFLAALESLKEFWDIMDEIDEKTWVLEPEKPTRGATVRRIAIGNNVSINIDVDPRHPKVLPECCFLGADHVVTPLRNKLNSNMHSWNPECTVLQNLKEVLEIDFPAPSAHEISNLNMECGICYAYRLDSAIPDQVCDDSRCGQPFHQACLLEWLRGLPSCRQSFNVIFGECPYCSKPITVKMSSKKS
SIO_010081: FANCL
subclass of: SO_0000673
so part of: FANCL
location: join(61642800..61642892,61758005..61758063,61974924..61974984,62023019..>62023075,<62442171..62442267,62527578..62527646,62851442..62851592,62991482..62991565,63204810..63204855,63204937..63205018,63282158..63282274,63459889..63459960,63603998..63604033)
location: region:61642800-63604033:1
so has part: feature:61642800-61642892:1:exon
so has part: feature:61758005-61758063:1:exon
so has part: feature:61974924-61974984:1:exon
so has part: feature:62023019-62023075:1:exon
so has part: feature:62442171-62442267:1:exon
so has part: feature:62527578-62527646:1:exon
so has part: feature:62851442-62851592:1:exon
so has part: feature:62991482-62991565:1:exon
so has part: feature:63204810-63204855:1:exon
so has part: feature:63204937-63205018:1:exon
so has part: feature:63282158-63282274:1:exon
so has part: feature:63459889-63459960:1:exon
so has part: feature:63603998-63604033:1:exon

XP_043910873.1
type: Protein
SIO_000068: ncbiprotein

position:61642800:1
position: 61642800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63604033:1
position: 63604033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61642800-61642892:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61758005-61758063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61974924-61974984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:62023019-62023075:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62442171-62442267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:62527578-62527646:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62851442-62851592:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62991482-62991565:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:63204810-63204855:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:63204937-63205018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63282158-63282274:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:63459889-63459960:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:63603998-63604033:1:exon

VRK2
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: VRK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(63604133..64907920)
location: region:63604133-64907920:-1
so has part: feature:63604133-64907920:-1:exon
subclass of: SO_0000010

122787987
type: Gene
SIO_000068: ncbigene

position:63604133:-1
position: 63604133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64907920:-1
position: 64907920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63604133-64907920:-1:exon

VRK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: VRK2
product: VRK serine/threonine kinase 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054930.1
SIO_010081: VRK2
subclass of: SO_0000673
so part of: VRK2
location: complement(join(63604133..63604510,63669083..63669202,63865262..63865381,63869819..63869938,64265898..64266076,64310968..64311026,64346433..64346553,64632820..64632952,64719786..64719878,64719991..64720099,64851524..64851611,64907855..64907920))
location: region:63604133-64907920:-1
so has part: feature:64907855-64907920:-1:exon
so has part: feature:64851524-64851611:-1:exon
so has part: feature:64719991-64720099:-1:exon
so has part: feature:64719786-64719878:-1:exon
so has part: feature:64632820-64632952:-1:exon
so has part: feature:64346433-64346553:-1:exon
so has part: feature:64310968-64311026:-1:exon
so has part: feature:64265898-64266076:-1:exon
so has part: feature:63869819-63869938:-1:exon
so has part: feature:63865262-63865381:-1:exon
so has part: feature:63669083-63669202:-1:exon
so has part: feature:63604133-63604510:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64907855-64907920:-1:exon

position:64907855:-1
position: 64907855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:64851524-64851611:-1:exon

position:64851524:-1
position: 64851524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64851611:-1
position: 64851611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:64719991-64720099:-1:exon

position:64719991:-1
position: 64719991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64720099:-1
position: 64720099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:64719786-64719878:-1:exon

position:64719786:-1
position: 64719786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64719878:-1
position: 64719878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:64632820-64632952:-1:exon

position:64632820:-1
position: 64632820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64632952:-1
position: 64632952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:64346433-64346553:-1:exon

position:64346433:-1
position: 64346433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64346553:-1
position: 64346553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:64310968-64311026:-1:exon

position:64310968:-1
position: 64310968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64311026:-1
position: 64311026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:64265898-64266076:-1:exon

position:64265898:-1
position: 64265898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64266076:-1
position: 64266076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:63869819-63869938:-1:exon

position:63869819:-1
position: 63869819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63869938:-1
position: 63869938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:63865262-63865381:-1:exon

position:63865262:-1
position: 63865262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63865381:-1
position: 63865381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:63669083-63669202:-1:exon

position:63669083:-1
position: 63669083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63669202:-1
position: 63669202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:63604133-63604510:-1:exon

position:63604510:-1
position: 63604510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VRK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: VRK2
product: VRK serine/threonine kinase 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054917.1
SIO_010081: VRK2
subclass of: SO_0000673
so part of: VRK2
location: complement(join(63604133..63604510,63669083..63669202,63802942..63803043,63865262..63865381,63869819..63869938,64265898..64266076,64310968..64311026,64346433..64346553,64632820..64632952,64719786..64719878,64719991..64720099,64851524..64851611,64907855..64907920))
location: region:63604133-64907920:-1
so has part: feature:64907855-64907920:-1:exon
so has part: feature:64851524-64851611:-1:exon
so has part: feature:64719991-64720099:-1:exon
so has part: feature:64719786-64719878:-1:exon
so has part: feature:64632820-64632952:-1:exon
so has part: feature:64346433-64346553:-1:exon
so has part: feature:64310968-64311026:-1:exon
so has part: feature:64265898-64266076:-1:exon
so has part: feature:63869819-63869938:-1:exon
so has part: feature:63865262-63865381:-1:exon
so has part: feature:63802942-63803043:-1:exon
so has part: feature:63669083-63669202:-1:exon
so has part: feature:63604133-63604510:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64907855-64907920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64851524-64851611:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64719991-64720099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64719786-64719878:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64632820-64632952:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64346433-64346553:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:64310968-64311026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:64265898-64266076:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:63869819-63869938:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:63865262-63865381:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63802942-63803043:-1:exon

position:63802942:-1
position: 63802942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63803043:-1
position: 63803043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:63669083-63669202:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:63604133-63604510:-1:exon

VRK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: VRK2
product: VRK serine/threonine kinase 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054923.1
SIO_010081: VRK2
subclass of: SO_0000673
so part of: VRK2
location: complement(join(63604133..63604510,63669083..63669202,63802942..63803043,63865262..63865381,63869819..63869938,64265898..64266076,64310968..64311026,64346433..64346553,64632820..64632952,64719786..64719878,64719991..64720099,64907855..64907914))
location: region:63604133-64907914:-1
so has part: feature:64907855-64907914:-1:exon
so has part: feature:64719991-64720099:-1:exon
so has part: feature:64719786-64719878:-1:exon
so has part: feature:64632820-64632952:-1:exon
so has part: feature:64346433-64346553:-1:exon
so has part: feature:64310968-64311026:-1:exon
so has part: feature:64265898-64266076:-1:exon
so has part: feature:63869819-63869938:-1:exon
so has part: feature:63865262-63865381:-1:exon
so has part: feature:63802942-63803043:-1:exon
so has part: feature:63669083-63669202:-1:exon
so has part: feature:63604133-63604510:-1:exon

position:64907914:-1
position: 64907914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64907855-64907914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64719991-64720099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64719786-64719878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64632820-64632952:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64346433-64346553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64310968-64311026:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:64265898-64266076:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:63869819-63869938:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:63865262-63865381:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:63802942-63803043:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63669083-63669202:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:63604133-63604510:-1:exon

VRK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: VRK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase VRK2 isoform X3
translation: MKDNCMGFLGIPLYWGSGCTDYKGKRYRFMVMDRLGTDLQHCLEMCGNRFAKTTVMQIGIRVLDILEYIHEHEYVHGDIKAANLLLGYRDENQVYLADYGLCYRYCPNGNHKEYKENPKKAHNGTIEFTSLDAHRGVDPSRRSDLEILGYCMLRWLCGELPWEMNLKNCEAVQSAKTRFMENLPHSVKECFACGLSCDGLACYFDYVKHLGYDEIPSYQLLKGMLLDELKPFRISTWDFLKFSPSKCNQNTNSSRKNAPQTEAVGNKPPQKCQMKAVAHTDVTSSTDRLTSRLRDNQVPQTEALENKPPFKCQMKTVACTEVTPSTDSVTSRLRDYQESSVGAMAYKPSVKCQNNARAPIKDTPSTGLITSLLRDTQNATSIQFEIQSYEGILHLREDGHCKSTLDYQDRTSLKEDYFHGGALHKSSKNHFKQDVPNSTNSQNCFNDENLHNPHSQSNLEVQSTAKQSIVMYGIAVIVLSVSILIVLQFY
SIO_010081: VRK2
subclass of: SO_0000673
so part of: VRK2
location: complement(join(63604169..63604510,63669083..63669202,63865262..63865381,63869819..63869938,64265898..64266076,64310968..64311026,64346433..64346553,64632820..64632952,64719786..64719878,64719991..64720099,64851524..64851600))
location: region:63604169-64851600:-1
so has part: feature:64851524-64851600:-1:exon
so has part: feature:64719991-64720099:-1:exon
so has part: feature:64719786-64719878:-1:exon
so has part: feature:64632820-64632952:-1:exon
so has part: feature:64346433-64346553:-1:exon
so has part: feature:64310968-64311026:-1:exon
so has part: feature:64265898-64266076:-1:exon
so has part: feature:63869819-63869938:-1:exon
so has part: feature:63865262-63865381:-1:exon
so has part: feature:63669083-63669202:-1:exon
so has part: feature:63604169-63604510:-1:exon

XP_043910865.1
type: Protein
SIO_000068: ncbiprotein

position:63604169:-1
position: 63604169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64851600:-1
position: 64851600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64851524-64851600:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64719991-64720099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64719786-64719878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64632820-64632952:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64346433-64346553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64310968-64311026:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:64265898-64266076:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:63869819-63869938:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:63865262-63865381:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:63669083-63669202:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63604169-63604510:-1:exon

VRK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: VRK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase VRK2 isoform X1
translation: MKDNCMGFLGIPLYWGSGCTDYKGKRYRFMVMDRLGTDLQHCLEMCGNRFAKTTVMQIGIRVLDILEYIHEHEYVHGDIKAANLLLGYRDENQVYLADYGLCYRYCPNGNHKEYKENPKKAHNGTIEFTSLDAHRGVDPSRRSDLEILGYCMLRWLCGELPWEMNLKNCEAVQSAKTRFMENLPHSVKECFACGLSCDGLACYFDYVKHLGYDEIPSYQLLKGMLLDELKPFRISTWDFLKFSPSKCNQNTNSSRKNAPQTEAVGNKPPQKCQMKAVAHTDVTSSTDRLTSRLRDNQVPQTEALENKPPFKCQMKTVACTEVTPSTDSVTSRLRDYQVTQTEAVGSKPSLKCQMMTAAPTDQLRIRQRDKKESSVGAMAYKPSVKCQNNARAPIKDTPSTGLITSLLRDTQNATSIQFEIQSYEGILHLREDGHCKSTLDYQDRTSLKEDYFHGGALHKSSKNHFKQDVPNSTNSQNCFNDENLHNPHSQSNLEVQSTAKQSIVMYGIAVIVLSVSILIVLQFY
SIO_010081: VRK2
subclass of: SO_0000673
so part of: VRK2
location: complement(join(63604169..63604510,63669083..63669202,63802942..63803043,63865262..63865381,63869819..63869938,64265898..64266076,64310968..64311026,64346433..64346553,64632820..64632952,64719786..64719878,64719991..64720099,64851524..64851600))
location: region:63604169-64851600:-1
so has part: feature:64851524-64851600:-1:exon
so has part: feature:64719991-64720099:-1:exon
so has part: feature:64719786-64719878:-1:exon
so has part: feature:64632820-64632952:-1:exon
so has part: feature:64346433-64346553:-1:exon
so has part: feature:64310968-64311026:-1:exon
so has part: feature:64265898-64266076:-1:exon
so has part: feature:63869819-63869938:-1:exon
so has part: feature:63865262-63865381:-1:exon
so has part: feature:63802942-63803043:-1:exon
so has part: feature:63669083-63669202:-1:exon
so has part: feature:63604169-63604510:-1:exon

XP_043910852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64851524-64851600:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64719991-64720099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64719786-64719878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64632820-64632952:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64346433-64346553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64310968-64311026:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:64265898-64266076:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:63869819-63869938:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:63865262-63865381:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:63802942-63803043:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63669083-63669202:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:63604169-63604510:-1:exon

VRK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: VRK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase VRK2 isoform X2
translation: MVMDRLGTDLQHCLEMCGNRFAKTTVMQIGIRVLDILEYIHEHEYVHGDIKAANLLLGYRDENQVYLADYGLCYRYCPNGNHKEYKENPKKAHNGTIEFTSLDAHRGVDPSRRSDLEILGYCMLRWLCGELPWEMNLKNCEAVQSAKTRFMENLPHSVKECFACGLSCDGLACYFDYVKHLGYDEIPSYQLLKGMLLDELKPFRISTWDFLKFSPSKCNQNTNSSRKNAPQTEAVGNKPPQKCQMKAVAHTDVTSSTDRLTSRLRDNQVPQTEALENKPPFKCQMKTVACTEVTPSTDSVTSRLRDYQVTQTEAVGSKPSLKCQMMTAAPTDQLRIRQRDKKESSVGAMAYKPSVKCQNNARAPIKDTPSTGLITSLLRDTQNATSIQFEIQSYEGILHLREDGHCKSTLDYQDRTSLKEDYFHGGALHKSSKNHFKQDVPNSTNSQNCFNDENLHNPHSQSNLEVQSTAKQSIVMYGIAVIVLSVSILIVLQFY
SIO_010081: VRK2
subclass of: SO_0000673
so part of: VRK2
location: complement(join(63604169..63604510,63669083..63669202,63802942..63803043,63865262..63865381,63869819..63869938,64265898..64266076,64310968..64311026,64346433..64346553,64632820..64632952,64719786..64719878,64719991..64720089))
location: region:63604169-64720089:-1
so has part: feature:64719991-64720089:-1:exon
so has part: feature:64719786-64719878:-1:exon
so has part: feature:64632820-64632952:-1:exon
so has part: feature:64346433-64346553:-1:exon
so has part: feature:64310968-64311026:-1:exon
so has part: feature:64265898-64266076:-1:exon
so has part: feature:63869819-63869938:-1:exon
so has part: feature:63865262-63865381:-1:exon
so has part: feature:63802942-63803043:-1:exon
so has part: feature:63669083-63669202:-1:exon
so has part: feature:63604169-63604510:-1:exon

XP_043910858.1
type: Protein
SIO_000068: ncbiprotein

position:64720089:-1
position: 64720089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64719991-64720089:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64719786-64719878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64632820-64632952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64346433-64346553:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64310968-64311026:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64265898-64266076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:63869819-63869938:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:63865262-63865381:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:63802942-63803043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:63669083-63669202:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63604169-63604510:-1:exon

LOC122792332
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122792332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(81012410..81013603)
location: region:81012410-81013603:-1
so has part: feature:81012410-81013603:-1:exon
subclass of: SO_0000010

122792332
type: Gene
SIO_000068: ncbigene

position:81012410:-1
position: 81012410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81013603:-1
position: 81013603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81012410-81013603:-1:exon

LOC122792332
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: LOC122792332
product: protein rtoA-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_044060131.1
SIO_010081: LOC122792332
subclass of: SO_0000673
so part of: LOC122792332
location: complement(81012410..81013603)
location: region:81012410-81013603:-1
so has part: feature:81012410-81013603:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81012410-81013603:-1:exon

LOC122792332
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: LOC122792332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein rtoA-like
translation: MAGSSNSVPVTMAGCRNSVPVNMTGSSNSVPITMAGSSNSVPVTMADSSKSVPVTMAGSNSVLVTMVGSSNFVPFTMAGSNNSVPVTMATSSNSVPVTMADSSKSVPVTMAGSSNSVPITMAGSSNSVPATMAGSSNSVPVTLSDSSNSVNVTMADSSNSVPVTMAGSSNYVPVTMAGSSNSVPVTMTGTNRYPSMSNEEHSSSNSIPIPIMGTKKYCSISNQEQSSSNAMPIFMAGTKKYCSISNQEHSSSNSMPITIAGTQKYSSTSNQKHSSSNSIPITIASTKKYCIISNQEHSSSNSMPISMAGTKKYCSISNQEHSSSNSMPISMAGTKKYCSISNQEHCSSNSVPITIAGTQRYSGGPSLSCYLPLSSTEYFNKERHVTPFMHKKPHYKF
SIO_010081: LOC122792332
subclass of: SO_0000673
so part of: LOC122792332
location: complement(81012410..81013603)
location: region:81012410-81013603:-1
so has part: feature:81012410-81013603:-1:exon

XP_043916066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81012410-81013603:-1:exon

BCL11A
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: BCL11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(87094969..87454585)
location: region:87094969-87454585:-1
so has part: feature:87094969-87454585:-1:exon
subclass of: SO_0000010

122788023
type: Gene
SIO_000068: ncbigene

position:87094969:-1
position: 87094969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87454585:-1
position: 87454585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87094969-87454585:-1:exon

BCL11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: BCL11A
product: BAF chromatin remodeling complex subunit BCL11A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054948.1
SIO_010081: BCL11A
subclass of: SO_0000673
so part of: BCL11A
location: complement(join(87094969..87100711,87448723..87449052,87454234..87454585))
location: region:87094969-87454585:-1
so has part: feature:87454234-87454585:-1:exon
so has part: feature:87448723-87449052:-1:exon
so has part: feature:87094969-87100711:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87454234-87454585:-1:exon

position:87454234:-1
position: 87454234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87448723-87449052:-1:exon

position:87448723:-1
position: 87448723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87449052:-1
position: 87449052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:87094969-87100711:-1:exon

position:87100711:-1
position: 87100711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BCL11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: BCL11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell lymphoma/leukemia 11A
translation: MSRRKQGKPQHLSKREFSPEAIDSLLTDDEPEHGTLGAPEGDHDLLTCGQCQITFPLGDILIFIEHKRKQCNGSICMDKVVDKPPSPSPSELRKATNPVEVGIQVTPEDDDCLSTSSRGICPKQENIAGKDEPSSYTCTNCKQTFTSAWFLLQHAQNTHGLRIYLESDHGSPLTPRVAIPTGLGTECASQLPLHGIHIAENNPFNLLRIPGSVSRESSGLGEGRFPPTPPLFSPPPRHHLDPHRLSAEEMALATHHPSAFDRVLRPLAMEPPAMDFSRRLRELAGNTSTPPLSPGRPSPMQRLLQPFQSSNKPPFMTTPPLPPLQTAPPPSQTPLKSKSCEFCGKTFKFQSNLIVHRRSHTGEKPYKCHLCDHACTQASKLKRHMKTHVHKSSPMTVKSDDGLSTASSPEPGTSDLVGSASSALKSVVAKFKSENEPNMIPENGDEEDEDEEDDEEEEEEEEEEEELTENNSRPDFGFGISLEAAHHHENNSRPCDESRSMPDVMQGMVLSAVQHYTEAFHQVMAEKHKVGHHAAEMDAHRDTCDEDSVAGESDRIDDGTINGRGSSPGDSASGGFSKKLLLASPSSMSPFSKRIKLEKDFDLPPAVMPNSENVYSQWLAGYAASRQLKDPFINFGDSRQSPFASSSEHSSENGSLRFSTPPGEMDGGISGRSGTGSGGSTPHISGPGPGRPSSKEGRRSDTCEFCGKIFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHMKTHGQVGKDVYKCEICQMPFSVYSTLEKHMKKWHSDRVLNNDIKTE
SIO_010081: BCL11A
subclass of: SO_0000673
so part of: BCL11A
location: complement(join(87098712..87100711,87448723..87449052,87454234..87454288))
location: region:87098712-87454288:-1
so has part: feature:87454234-87454288:-1:exon
so has part: feature:87448723-87449052:-1:exon
so has part: feature:87098712-87100711:-1:exon

XP_043910883.1
type: Protein
SIO_000068: ncbiprotein

position:87098712:-1
position: 87098712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87454288:-1
position: 87454288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87454234-87454288:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87448723-87449052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87098712-87100711:-1:exon

LOC122788033
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122788033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 87467988..87584006
location: region:87467988-87584006:1
so has part: feature:87467988-87584006:1:exon
subclass of: SO_0000011

122788033
type: Gene
SIO_000068: ncbigene

position:87467988:1
position: 87467988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87584006:1
position: 87584006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87467988-87584006:1:exon

LOC122788033
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7888
nc RNA class: lncRNA
gene: LOC122788033
product: uncharacterized LOC122788033
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006362604.1
SIO_010081: LOC122788033
subclass of: SO_0000673
so part of: LOC122788033
location: join(87467988..87468743,87580778..87584006)
location: region:87467988-87584006:1
so has part: feature:87467988-87468743:1:exon
so has part: feature:87580778-87584006:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87467988-87468743:1:exon

position:87468743:1
position: 87468743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87580778-87584006:1:exon

position:87580778:1
position: 87580778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122792334
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122792334
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 88468363..88524029
location: region:88468363-88524029:1
so has part: feature:88468363-88524029:1:exon
subclass of: SO_0000010

122792334
type: Gene
SIO_000068: ncbigene

position:88468363:1
position: 88468363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88524029:1
position: 88524029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88468363-88524029:1:exon

LOC122792334
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: LOC122792334
product: poly(A) polymerase gamma-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_044060132.1
SIO_010081: LOC122792334
subclass of: SO_0000673
so part of: LOC122792334
location: join(88468363..88468559,88523695..88523865,88523948..88524029)
location: region:88468363-88524029:1
so has part: feature:88468363-88468559:1:exon
so has part: feature:88523695-88523865:1:exon
so has part: feature:88523948-88524029:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88468363-88468559:1:exon

position:88468559:1
position: 88468559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88523695-88523865:1:exon

position:88523695:1
position: 88523695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88523865:1
position: 88523865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88523948-88524029:1:exon

position:88523948:1
position: 88523948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122792334
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: LOC122792334
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(A) polymerase gamma-like
translation: MRDMLTNTAMLAIRSHYPQKYYGITSPISLAYPKEEDQILTGNLIEAMKPFGVFEDSEELNHRLVVLGKLNSLVKEWIAEVGEGKVFKK
SIO_010081: LOC122792334
subclass of: SO_0000673
so part of: LOC122792334
location: join(88468543..88468559,88523695..88523865,88523948..88524029)
location: region:88468543-88524029:1
so has part: feature:88468543-88468559:1:exon
so has part: feature:88523695-88523865:1:exon
so has part: feature:88523948-88524029:1:exon

XP_043916067.1
type: Protein
SIO_000068: ncbiprotein

position:88468543:1
position: 88468543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88468543-88468559:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88523695-88523865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88523948-88524029:1:exon

PAPOLG
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: PAPOLG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 88646880..89876364
location: region:88646880-89876364:1
so has part: feature:88646880-89876364:1:exon
subclass of: SO_0000010

122788040
type: Gene
SIO_000068: ncbigene

position:88646880:1
position: 88646880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89876364:1
position: 89876364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88646880-89876364:1:exon

PAPOLG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: PAPOLG
product: poly(A) polymerase gamma
experiment: COORDINATES: polyA evidence [ECO:0006239]
inference: similar to RNA sequence (same species):INSD:GGXP01065610.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 120 bases not found in genome assembly
transcript id: XM_044054963.1
SIO_010081: PAPOLG
subclass of: SO_0000673
so part of: PAPOLG
location: join(88646880..88646974,88647071..88647209,88722871..88722943,88723022..88723142,88773348..88773432,88840219..>88840272,<89032540..89032649,89340843..89340964,89341043..89341212,89473724..89473803,89545413..89545621,89673285..89673344,89875132..89876364)
location: region:88646880-89876364:1
so has part: feature:88646880-88646974:1:exon
so has part: feature:88647071-88647209:1:exon
so has part: feature:88722871-88722943:1:exon
so has part: feature:88723022-88723142:1:exon
so has part: feature:88773348-88773432:1:exon
so has part: feature:88840219-88840272:1:exon
so has part: feature:89032540-89032649:1:exon
so has part: feature:89340843-89340964:1:exon
so has part: feature:89341043-89341212:1:exon
so has part: feature:89473724-89473803:1:exon
so has part: feature:89545413-89545621:1:exon
so has part: feature:89673285-89673344:1:exon
so has part: feature:89875132-89876364:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88646880-88646974:1:exon

position:88646974:1
position: 88646974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88647071-88647209:1:exon

position:88647071:1
position: 88647071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88647209:1
position: 88647209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88722871-88722943:1:exon

position:88722871:1
position: 88722871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88722943:1
position: 88722943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:88723022-88723142:1:exon

position:88723022:1
position: 88723022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88723142:1
position: 88723142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:88773348-88773432:1:exon

position:88773348:1
position: 88773348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88773432:1
position: 88773432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:88840219-88840272:1:exon

position:88840219:1
position: 88840219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88840272:1
position: 88840272
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 7
SIO_000628: feature:89032540-89032649:1:exon

position:89032540:1
position: 89032540
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:89032649:1
position: 89032649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:89340843-89340964:1:exon

position:89340843:1
position: 89340843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89340964:1
position: 89340964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:89341043-89341212:1:exon

position:89341043:1
position: 89341043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89341212:1
position: 89341212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:89473724-89473803:1:exon

position:89473724:1
position: 89473724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89473803:1
position: 89473803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:89545413-89545621:1:exon

position:89545413:1
position: 89545413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89545621:1
position: 89545621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:89673285-89673344:1:exon

position:89673285:1
position: 89673285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89673344:1
position: 89673344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:89875132-89876364:1:exon

position:89875132:1
position: 89875132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAPOLG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: PAPOLG
inference: similar to RNA sequence (same species):INSD:GGXP01065610.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 120 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(A) polymerase gamma
translation: MLVARTCQLYPNAVASTLIHKFFLVFSKWDWPNPVLLKQPEDSNLNLPVWDPRVNPADRFHLMPIITPAYPQQNSTYNVSTSTRAVIVEEFKQGLVVTEEIVSGKADWSKLFETPLFFQKYKHYIVLKATASTEAHHLEWIGLVESKIRVLVGNLERNDFITLAHVNPQSYSGIKDHQNQDEYICQWFIGVVFRKVEHADGVSIDLTDDIQAFTDTVYRQASNINMLKDGMTIEATHVKRRQLHQYLPAEVLLKKKRSLPDVGRNSSGSHSKRASLDGSSLDSSRENDAGTPFCSPTTLHKSSNESPAASEFYRNITPGNKTAASSVERNSSYASPDLCAISAVKPASSSSVCTIPNVFGGNMSPHFTTPPSNNPEVNGIPAVGSCCAVSKRPHSPTLEESPKKLKDMEEVSIGGEKPLPIPSINISRSQRLSSKELPDATSPVPTSNIRVIKNSIRLTLNR
SIO_010081: PAPOLG
subclass of: SO_0000673
so part of: PAPOLG
location: join(88647124..88647209,88722871..88722943,88723022..88723142,88773348..88773432,88840219..>88840272,<89032540..89032649,89340843..89340964,89341043..89341212,89473724..89473803,89545413..89545621,89673285..89673344,89875132..89875230)
location: region:88647124-89875230:1
so has part: feature:88647124-88647209:1:exon
so has part: feature:88722871-88722943:1:exon
so has part: feature:88723022-88723142:1:exon
so has part: feature:88773348-88773432:1:exon
so has part: feature:88840219-88840272:1:exon
so has part: feature:89032540-89032649:1:exon
so has part: feature:89340843-89340964:1:exon
so has part: feature:89341043-89341212:1:exon
so has part: feature:89473724-89473803:1:exon
so has part: feature:89545413-89545621:1:exon
so has part: feature:89673285-89673344:1:exon
so has part: feature:89875132-89875230:1:exon

XP_043910898.1
type: Protein
SIO_000068: ncbiprotein

position:88647124:1
position: 88647124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89875230:1
position: 89875230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88647124-88647209:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88722871-88722943:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88723022-88723142:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88773348-88773432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88840219-88840272:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:89032540-89032649:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89340843-89340964:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89341043-89341212:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:89473724-89473803:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:89545413-89545621:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:89673285-89673344:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:89875132-89875230:1:exon

LOC122788049
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122788049
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(90264231..92772742)
location: region:90264231-92772742:-1
so has part: feature:90264231-92772742:-1:exon
subclass of: SO_0000010

122788049
type: Gene
SIO_000068: ncbigene

position:90264231:-1
position: 90264231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92772742:-1
position: 92772742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90264231-92772742:-1:exon

LOC122788049
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: LOC122788049
product: proto-oncogene c-Rel-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044054974.1
SIO_010081: LOC122788049
subclass of: SO_0000673
so part of: LOC122788049
location: complement(join(90264231..90265448,90582059..90582112,90822898..90822975,90996840..90997055,91105503..91105607,91380385..91380525,91652116..91652207,92029855..92030003,92299161..92299303,92772436..92772736))
location: region:90264231-92772736:-1
so has part: feature:92772436-92772736:-1:exon
so has part: feature:92299161-92299303:-1:exon
so has part: feature:92029855-92030003:-1:exon
so has part: feature:91652116-91652207:-1:exon
so has part: feature:91380385-91380525:-1:exon
so has part: feature:91105503-91105607:-1:exon
so has part: feature:90996840-90997055:-1:exon
so has part: feature:90822898-90822975:-1:exon
so has part: feature:90582059-90582112:-1:exon
so has part: feature:90264231-90265448:-1:exon

position:92772736:-1
position: 92772736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92772436-92772736:-1:exon

position:92772436:-1
position: 92772436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92299161-92299303:-1:exon

position:92299161:-1
position: 92299161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92299303:-1
position: 92299303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:92029855-92030003:-1:exon

position:92029855:-1
position: 92029855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92030003:-1
position: 92030003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:91652116-91652207:-1:exon

position:91652116:-1
position: 91652116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91652207:-1
position: 91652207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:91380385-91380525:-1:exon

position:91380385:-1
position: 91380385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91380525:-1
position: 91380525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:91105503-91105607:-1:exon

position:91105503:-1
position: 91105503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91105607:-1
position: 91105607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:90996840-90997055:-1:exon

position:90996840:-1
position: 90996840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90997055:-1
position: 90997055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:90822898-90822975:-1:exon

position:90822898:-1
position: 90822898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90822975:-1
position: 90822975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:90582059-90582112:-1:exon

position:90582059:-1
position: 90582059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90582112:-1
position: 90582112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:90264231-90265448:-1:exon

position:90265448:-1
position: 90265448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122788049
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: LOC122788049
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene c-Rel-like isoform X1
translation: MNAIAEPYVQIIEQPKQRGMRFRYKCETPFAGSIPGEHSTDTNRTYPAIKVMNFYGRVKVRITLVTKDELRKPHPHNLVGRDCKDGYYEIEFGPDDKILSFQNIGIQCVKRNEVRDAILLRMTQNINPFNVPQEALLRVEDYDLNVVRLCFQVFLPDSHGCFTIELPPVVSNPIYDNRAPNTAELRICRVDKNCGSVQGGDEIFLLCDKVQKDDIEVRFFKDSWEAKGTFSHADVHRQVAIVFRTPAYFKTNITVPETVQMQLRRPSDQEVSDPMDFKYLPIEKDPYSLQEKRKRTAAVFQKLVQDWRQPEQSKVVKYEPSHRSTSKKEPFNLYTALTPKQQPSSVSLSQIQSCYSVLDSPLNAVILQPPSVQPMVLTDLQWSTGVAPLVFNSTSSICSPQLPHCGTLANTPLPLVGNFDAEKCISLHTGLPQTLCGVDSNMRISGIQNSTQASIFSVPNISSIGYENSTSVDLNPSNGDILEQVLNFEDADAFISKSMPPNSSTESGVHSVPNHTFFATSVQGEDRFSPVALESSSCLSTDLDDLLRCLNDSIAE
SIO_010081: LOC122788049
subclass of: SO_0000673
so part of: LOC122788049
location: complement(join(90264763..90265448,90582059..90582112,90822898..90822975,90996840..90997055,91105503..91105607,91380385..91380525,91652116..91652207,92029855..92030003,92299161..92299303,92772436..92772442))
location: region:90264763-92772442:-1
so has part: feature:92772436-92772442:-1:exon
so has part: feature:92299161-92299303:-1:exon
so has part: feature:92029855-92030003:-1:exon
so has part: feature:91652116-91652207:-1:exon
so has part: feature:91380385-91380525:-1:exon
so has part: feature:91105503-91105607:-1:exon
so has part: feature:90996840-90997055:-1:exon
so has part: feature:90822898-90822975:-1:exon
so has part: feature:90582059-90582112:-1:exon
so has part: feature:90264763-90265448:-1:exon

XP_043910909.1
type: Protein
SIO_000068: ncbiprotein

position:90264763:-1
position: 90264763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92772442:-1
position: 92772442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92772436-92772442:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92299161-92299303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92029855-92030003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91652116-91652207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91380385-91380525:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91105503-91105607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90996840-90997055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90822898-90822975:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90582059-90582112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90264763-90265448:-1:exon

LOC122788049
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: LOC122788049
product: proto-oncogene c-Rel-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_044054987.1
SIO_010081: LOC122788049
subclass of: SO_0000673
so part of: LOC122788049
location: complement(join(90265362..90265448,90582059..90582112,90673349..90673415,90822898..90822975,90996840..90997055,91105503..91105607,91380385..91380525,91652116..91652207,92029855..92030003,92299161..92299303,92772436..92772738))
location: region:90265362-92772738:-1
so has part: feature:92772436-92772738:-1:exon
so has part: feature:92299161-92299303:-1:exon
so has part: feature:92029855-92030003:-1:exon
so has part: feature:91652116-91652207:-1:exon
so has part: feature:91380385-91380525:-1:exon
so has part: feature:91105503-91105607:-1:exon
so has part: feature:90996840-90997055:-1:exon
so has part: feature:90822898-90822975:-1:exon
so has part: feature:90673349-90673415:-1:exon
so has part: feature:90582059-90582112:-1:exon
so has part: feature:90265362-90265448:-1:exon

position:90265362:-1
position: 90265362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92772738:-1
position: 92772738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92772436-92772738:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92299161-92299303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92029855-92030003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91652116-91652207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91380385-91380525:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91105503-91105607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90996840-90997055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90822898-90822975:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90673349-90673415:-1:exon

position:90673349:-1
position: 90673349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90673415:-1
position: 90673415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:90582059-90582112:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:90265362-90265448:-1:exon

LOC122788049
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: LOC122788049
product: proto-oncogene c-Rel-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_044054981.1
SIO_010081: LOC122788049
subclass of: SO_0000673
so part of: LOC122788049
location: complement(join(90265409..90265448,90501142..90501304,90582059..90582112,90822898..90822975,90996840..90997055,91105503..91105607,91380385..91380525,91652116..91652207,92029855..92030003,92299161..92299303,92772436..92772742))
location: region:90265409-92772742:-1
so has part: feature:92772436-92772742:-1:exon
so has part: feature:92299161-92299303:-1:exon
so has part: feature:92029855-92030003:-1:exon
so has part: feature:91652116-91652207:-1:exon
so has part: feature:91380385-91380525:-1:exon
so has part: feature:91105503-91105607:-1:exon
so has part: feature:90996840-90997055:-1:exon
so has part: feature:90822898-90822975:-1:exon
so has part: feature:90582059-90582112:-1:exon
so has part: feature:90501142-90501304:-1:exon
so has part: feature:90265409-90265448:-1:exon

position:90265409:-1
position: 90265409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92772436-92772742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92299161-92299303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92029855-92030003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91652116-91652207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91380385-91380525:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91105503-91105607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90996840-90997055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90822898-90822975:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90582059-90582112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90501142-90501304:-1:exon

position:90501142:-1
position: 90501142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90501304:-1
position: 90501304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:90265409-90265448:-1:exon

LOC122788049
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: LOC122788049
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene c-Rel-like isoform X2
translation: MNAIAEPYVQIIEQPKQRGMRFRYKCETPFAGSIPGEHSTDTNRTYPAIKVMNFYGRVKVRITLVTKDELRKPHPHNLVGRDCKDGYYEIEFGPDDKILSFQNIGIQCVKRNEVRDAILLRMTQNINPFNVPQEALLRVEDYDLNVVRLCFQVFLPDSHGCFTIELPPVVSNPIYDNRAPNTAELRICRVDKNCGSVQGGDEIFLLCDKVQKDDIEVRFFKDSWEAKGTFSHADVHRQVAIVFRTPAYFKTNITVPETVQMQLRRPSDQEVSDPMDFKYLPIEKDPYSLQEKRKRTAAVFQKLVQDWRQPEQSKVVKYEPSHRSTSKKAHSCWLLFLVSCLSSICIIFIQVIQEPFRYLNEEMMSQQAKKINIAGIEFILKS
SIO_010081: LOC122788049
subclass of: SO_0000673
so part of: LOC122788049
location: complement(join(90265448,90501142..90501304,90582059..90582112,90822898..90822975,90996840..90997055,91105503..91105607,91380385..91380525,91652116..91652207,92029855..92030003,92299161..92299303,92772436..92772442))
location: region:90265448-92772442:-1
so has part: feature:92772436-92772442:-1:exon
so has part: feature:92299161-92299303:-1:exon
so has part: feature:92029855-92030003:-1:exon
so has part: feature:91652116-91652207:-1:exon
so has part: feature:91380385-91380525:-1:exon
so has part: feature:91105503-91105607:-1:exon
so has part: feature:90996840-90997055:-1:exon
so has part: feature:90822898-90822975:-1:exon
so has part: feature:90582059-90582112:-1:exon
so has part: feature:90501142-90501304:-1:exon
so has part: feature:90265448-90265448:-1:exon

XP_043910916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92772436-92772442:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92299161-92299303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92029855-92030003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91652116-91652207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91380385-91380525:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91105503-91105607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90996840-90997055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90822898-90822975:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90582059-90582112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90501142-90501304:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:90265448-90265448:-1:exon

LOC122788049
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: LOC122788049
product: proto-oncogene c-Rel-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_044054994.1
SIO_010081: LOC122788049
subclass of: SO_0000673
so part of: LOC122788049
location: complement(join(90501227..90501304,90582059..90582112,90673349..90673415,90822898..90822975,90996840..90997055,91105503..91105607,91380385..91380525,91652116..91652207,92029855..92030003,92299161..92299303,92772436..92772739))
location: region:90501227-92772739:-1
so has part: feature:92772436-92772739:-1:exon
so has part: feature:92299161-92299303:-1:exon
so has part: feature:92029855-92030003:-1:exon
so has part: feature:91652116-91652207:-1:exon
so has part: feature:91380385-91380525:-1:exon
so has part: feature:91105503-91105607:-1:exon
so has part: feature:90996840-90997055:-1:exon
so has part: feature:90822898-90822975:-1:exon
so has part: feature:90673349-90673415:-1:exon
so has part: feature:90582059-90582112:-1:exon
so has part: feature:90501227-90501304:-1:exon

position:90501227:-1
position: 90501227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92772739:-1
position: 92772739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92772436-92772739:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92299161-92299303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92029855-92030003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91652116-91652207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91380385-91380525:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91105503-91105607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90996840-90997055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90822898-90822975:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90673349-90673415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90582059-90582112:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:90501227-90501304:-1:exon

LOC122788049
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: LOC122788049
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene c-Rel-like isoform X3
translation: MNAIAEPYVQIIEQPKQRGMRFRYKCETPFAGSIPGEHSTDTNRTYPAIKVMNFYGRVKVRITLVTKDELRKPHPHNLVGRDCKDGYYEIEFGPDDKILSFQNIGIQCVKRNEVRDAILLRMTQNINPFNVPQEALLRVEDYDLNVVRLCFQVFLPDSHGCFTIELPPVVSNPIYDNRAPNTAELRICRVDKNCGSVQGGDEIFLLCDKVQKDDIEVRFFKDSWEAKGTFSHADVHRQVAIVFRTPAYFKTNITVPETVQMQLRRPSDQEVSDPMDFKYLPIEKDPYSLQEKRKRTAAVFQKLVQDWRQPAAQDISVNRGAHAERLEKLRGKGTI
SIO_010081: LOC122788049
subclass of: SO_0000673
so part of: LOC122788049
location: complement(join(90582103..90582112,90673349..90673415,90822898..90822975,90996840..90997055,91105503..91105607,91380385..91380525,91652116..91652207,92029855..92030003,92299161..92299303,92772436..92772442))
location: region:90582103-92772442:-1
so has part: feature:92772436-92772442:-1:exon
so has part: feature:92299161-92299303:-1:exon
so has part: feature:92029855-92030003:-1:exon
so has part: feature:91652116-91652207:-1:exon
so has part: feature:91380385-91380525:-1:exon
so has part: feature:91105503-91105607:-1:exon
so has part: feature:90996840-90997055:-1:exon
so has part: feature:90822898-90822975:-1:exon
so has part: feature:90673349-90673415:-1:exon
so has part: feature:90582103-90582112:-1:exon

XP_043910922.1
type: Protein
SIO_000068: ncbiprotein

position:90582103:-1
position: 90582103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92772436-92772442:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92299161-92299303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92029855-92030003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91652116-91652207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91380385-91380525:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91105503-91105607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90996840-90997055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90822898-90822975:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90673349-90673415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90582103-90582112:-1:exon

LOC122788049
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: LOC122788049
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene c-Rel-like isoform X3
translation: MNAIAEPYVQIIEQPKQRGMRFRYKCETPFAGSIPGEHSTDTNRTYPAIKVMNFYGRVKVRITLVTKDELRKPHPHNLVGRDCKDGYYEIEFGPDDKILSFQNIGIQCVKRNEVRDAILLRMTQNINPFNVPQEALLRVEDYDLNVVRLCFQVFLPDSHGCFTIELPPVVSNPIYDNRAPNTAELRICRVDKNCGSVQGGDEIFLLCDKVQKDDIEVRFFKDSWEAKGTFSHADVHRQVAIVFRTPAYFKTNITVPETVQMQLRRPSDQEVSDPMDFKYLPIEKDPYSLQEKRKRTAAVFQKLVQDWRQPAAQDISVNRGAHAERLEKLRGKGTI
SIO_010081: LOC122788049
subclass of: SO_0000673
so part of: LOC122788049
location: complement(join(90582103..90582112,90673349..90673415,90822898..90822975,90996840..90997055,91105503..91105607,91380385..91380525,91652116..91652207,92029855..92030003,92299161..92299303,92772436..92772442))
location: region:90582103-92772442:-1
so has part: feature:92772436-92772442:-1:exon
so has part: feature:92299161-92299303:-1:exon
so has part: feature:92029855-92030003:-1:exon
so has part: feature:91652116-91652207:-1:exon
so has part: feature:91380385-91380525:-1:exon
so has part: feature:91105503-91105607:-1:exon
so has part: feature:90996840-90997055:-1:exon
so has part: feature:90822898-90822975:-1:exon
so has part: feature:90673349-90673415:-1:exon
so has part: feature:90582103-90582112:-1:exon

XP_043910929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92772436-92772442:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92299161-92299303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92029855-92030003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91652116-91652207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91380385-91380525:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91105503-91105607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90996840-90997055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90822898-90822975:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90673349-90673415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90582103-90582112:-1:exon

LOC122788078
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122788078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 93399335..95249286
location: region:93399335-95249286:1
so has part: feature:93399335-95249286:1:exon
subclass of: SO_0000010

122788078
type: Gene
SIO_000068: ncbigene

position:93399335:1
position: 93399335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95249286:1
position: 95249286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93399335-95249286:1:exon

LOC122788078
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: LOC122788078
product: proto-oncogene c-Rel-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_044055006.1
SIO_010081: LOC122788078
subclass of: SO_0000673
so part of: LOC122788078
location: join(93399335..93399524,93794579..93794721,93926602..93926750,94020531..94020622,94454220..94454360,94782611..94782715,94900824..94901039,94982531..94982608,95120652..95120723,95246885..95249286)
location: region:93399335-95249286:1
so has part: feature:93399335-93399524:1:exon
so has part: feature:93794579-93794721:1:exon
so has part: feature:93926602-93926750:1:exon
so has part: feature:94020531-94020622:1:exon
so has part: feature:94454220-94454360:1:exon
so has part: feature:94782611-94782715:1:exon
so has part: feature:94900824-94901039:1:exon
so has part: feature:94982531-94982608:1:exon
so has part: feature:95120652-95120723:1:exon
so has part: feature:95246885-95249286:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93399335-93399524:1:exon

position:93399524:1
position: 93399524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:93794579-93794721:1:exon

position:93794579:1
position: 93794579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93794721:1
position: 93794721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:93926602-93926750:1:exon

position:93926602:1
position: 93926602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93926750:1
position: 93926750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:94020531-94020622:1:exon

position:94020531:1
position: 94020531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94020622:1
position: 94020622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:94454220-94454360:1:exon

position:94454220:1
position: 94454220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94454360:1
position: 94454360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:94782611-94782715:1:exon

position:94782611:1
position: 94782611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94782715:1
position: 94782715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:94900824-94901039:1:exon

position:94900824:1
position: 94900824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94901039:1
position: 94901039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:94982531-94982608:1:exon

position:94982531:1
position: 94982531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94982608:1
position: 94982608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:95120652-95120723:1:exon

position:95120652:1
position: 95120652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95120723:1
position: 95120723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:95246885-95249286:1:exon

position:95246885:1
position: 95246885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122788078
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: LOC122788078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene c-Rel-like
translation: MDGIEKTYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDSNRTYPAIQIMNYCGKGKVRVTLVTKGEDFKPHPHDLVGKDCKDGYYETEFGPERKVLSFQNLGIQCVKRKEVKDAVLLRIQRNINPFNVPREALLNIEDYDLNVVRLCFQVFIPDSHGNFTIALTPVVSNPIYDNRAPNTAELRICRVNKNCGSVKGGDEIFLLCDKVQKDDIEVRFFTDTWEAKGSFSQADVHRQVAIVFRTPAYFSPNIAVAVTVQMQLRRPSDQEVSEPMDFRYLPEEKDPYCCQDKRKRTMKTLQKFMQDLNHPAQNLTERLKAVPYAHIGPVREIKKEPGYPSSASPRQPPPPSVPTTQSYFTSSLDSSTAMFHTPYFQSGVPTKLQPSPPDWISVNPVINSTGTNDMFSTPGPHCNTQDNSQLSDLHGDILEFLSLPTHHNPTSNIYRNCAFVDLGIPPVTQTNIFSVNKTNLGNQSSSAVNVAAHNGGSRAQERFVGFNVETFHPLFKPREQGQEVQQVSSTPTTAVIHSPPLSSFAPDMEQNFLSFMDSSGALTETREPSNTVIDDQNCMQHSGYFVDRSQGEERYNSVMFEPEQDFDALLRAFDDSKDK
SIO_010081: LOC122788078
subclass of: SO_0000673
so part of: LOC122788078
location: join(93399518..93399524,93794579..93794721,93926602..93926750,94020531..94020622,94454220..94454360,94782611..94782715,94900824..94901039,94982531..94982608,95120652..95120723,95246885..95247714)
location: region:93399518-95247714:1
so has part: feature:93399518-93399524:1:exon
so has part: feature:93794579-93794721:1:exon
so has part: feature:93926602-93926750:1:exon
so has part: feature:94020531-94020622:1:exon
so has part: feature:94454220-94454360:1:exon
so has part: feature:94782611-94782715:1:exon
so has part: feature:94900824-94901039:1:exon
so has part: feature:94982531-94982608:1:exon
so has part: feature:95120652-95120723:1:exon
so has part: feature:95246885-95247714:1:exon

XP_043910941.1
type: Protein
SIO_000068: ncbiprotein

position:93399518:1
position: 93399518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95247714:1
position: 95247714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93399518-93399524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93794579-93794721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93926602-93926750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94020531-94020622:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94454220-94454360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94782611-94782715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94900824-94901039:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94982531-94982608:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:95120652-95120723:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:95246885-95247714:1:exon

PUS10
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: PUS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(95531359..97369478)
location: region:95531359-97369478:-1
so has part: feature:95531359-97369478:-1:exon
subclass of: SO_0000010

122788086
type: Gene
SIO_000068: ncbigene

position:95531359:-1
position: 95531359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97369478:-1
position: 97369478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95531359-97369478:-1:exon

PUS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: PUS10
product: pseudouridine synthase 10, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055027.1
SIO_010081: PUS10
subclass of: SO_0000673
so part of: PUS10
location: complement(join(95531359..95531706,95656192..95656291,95746966..95747108,95907513..95907630,95907739..95907791,96046378..96046454,96101015..96101071,96180861..96180986,96225927..96226012,96298763..96298827,96435577..96435622,96476372..96476433,96533144..96533249,96912802..96912836,97049760..97049846,97328111..97328245,97369385..97369478))
location: region:95531359-97369478:-1
so has part: feature:97369385-97369478:-1:exon
so has part: feature:97328111-97328245:-1:exon
so has part: feature:97049760-97049846:-1:exon
so has part: feature:96912802-96912836:-1:exon
so has part: feature:96533144-96533249:-1:exon
so has part: feature:96476372-96476433:-1:exon
so has part: feature:96435577-96435622:-1:exon
so has part: feature:96298763-96298827:-1:exon
so has part: feature:96225927-96226012:-1:exon
so has part: feature:96180861-96180986:-1:exon
so has part: feature:96101015-96101071:-1:exon
so has part: feature:96046378-96046454:-1:exon
so has part: feature:95907739-95907791:-1:exon
so has part: feature:95907513-95907630:-1:exon
so has part: feature:95746966-95747108:-1:exon
so has part: feature:95656192-95656291:-1:exon
so has part: feature:95531359-95531706:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:97369385-97369478:-1:exon

position:97369385:-1
position: 97369385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:97328111-97328245:-1:exon

position:97328111:-1
position: 97328111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97328245:-1
position: 97328245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:97049760-97049846:-1:exon

position:97049760:-1
position: 97049760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97049846:-1
position: 97049846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:96912802-96912836:-1:exon

position:96912802:-1
position: 96912802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96912836:-1
position: 96912836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:96533144-96533249:-1:exon

position:96533144:-1
position: 96533144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96533249:-1
position: 96533249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:96476372-96476433:-1:exon

position:96476372:-1
position: 96476372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96476433:-1
position: 96476433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:96435577-96435622:-1:exon

position:96435577:-1
position: 96435577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96435622:-1
position: 96435622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:96298763-96298827:-1:exon

position:96298763:-1
position: 96298763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96298827:-1
position: 96298827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:96225927-96226012:-1:exon

position:96225927:-1
position: 96225927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96226012:-1
position: 96226012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:96180861-96180986:-1:exon

position:96180861:-1
position: 96180861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96180986:-1
position: 96180986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:96101015-96101071:-1:exon

position:96101015:-1
position: 96101015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96101071:-1
position: 96101071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:96046378-96046454:-1:exon

position:96046378:-1
position: 96046378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96046454:-1
position: 96046454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:95907739-95907791:-1:exon

position:95907739:-1
position: 95907739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95907791:-1
position: 95907791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:95907513-95907630:-1:exon

position:95907513:-1
position: 95907513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95907630:-1
position: 95907630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:95746966-95747108:-1:exon

position:95746966:-1
position: 95746966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95747108:-1
position: 95747108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:95656192-95656291:-1:exon

position:95656192:-1
position: 95656192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95656291:-1
position: 95656291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:95531359-95531706:-1:exon

position:95531706:-1
position: 95531706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PUS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: PUS10
product: pseudouridine synthase 10, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055017.1
SIO_010081: PUS10
subclass of: SO_0000673
so part of: PUS10
location: complement(join(95531359..95531706,95656192..95656291,95746966..95747108,95907513..95907630,95907739..95907791,96046378..96046454,96101015..96101071,96180861..96180986,96225927..96226012,96298763..96298827,96435577..96435622,96476372..96476433,96533144..96533249,96912802..96912836,97049760..97049846,97221928..97222188,97328111..97328245,97369385..97369478))
location: region:95531359-97369478:-1
so has part: feature:97369385-97369478:-1:exon
so has part: feature:97328111-97328245:-1:exon
so has part: feature:97221928-97222188:-1:exon
so has part: feature:97049760-97049846:-1:exon
so has part: feature:96912802-96912836:-1:exon
so has part: feature:96533144-96533249:-1:exon
so has part: feature:96476372-96476433:-1:exon
so has part: feature:96435577-96435622:-1:exon
so has part: feature:96298763-96298827:-1:exon
so has part: feature:96225927-96226012:-1:exon
so has part: feature:96180861-96180986:-1:exon
so has part: feature:96101015-96101071:-1:exon
so has part: feature:96046378-96046454:-1:exon
so has part: feature:95907739-95907791:-1:exon
so has part: feature:95907513-95907630:-1:exon
so has part: feature:95746966-95747108:-1:exon
so has part: feature:95656192-95656291:-1:exon
so has part: feature:95531359-95531706:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:97369385-97369478:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97328111-97328245:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97221928-97222188:-1:exon

position:97221928:-1
position: 97221928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97222188:-1
position: 97222188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:97049760-97049846:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96912802-96912836:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96533144-96533249:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:96476372-96476433:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:96435577-96435622:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:96298763-96298827:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96225927-96226012:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:96180861-96180986:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:96101015-96101071:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:96046378-96046454:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:95907739-95907791:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:95907513-95907630:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:95746966-95747108:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:95656192-95656291:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:95531359-95531706:-1:exon

PUS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: PUS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA pseudouridine synthase Pus10 isoform X2
translation: MLLLHEKYKPVVRVLLKAGCCCRCVLRFCCVGQQDPYKLPYEVCEKVNSAGYEFDSVAFSVSLPPQFSVREHALWLFIKQEVGQQLLKKEEIVRLKDVYKWIIHPLLSEELGVPMDSKSLFTVSVVFAHPKTDGDCHFLATFCPDCFRPAKNKQSVFTRLAVVKALEKIKDEDFCKHFPCPPSSSEMGCVTEEIQCVHAPVYIAGRYNKYSRTLPQTPWIIDGERKMESSVEELISEHLMPAFKVSHFNFSSSGREDVDVRTLGKGRPFAIELVSPHRASFTQEEIKALQQKINQSDKIKVRDLQMVTREAVAHMKKGEEEKTKSYSALIWTERAIQENDIQFLNELKELKIFQKTPLRVLHRRPLAVRTRLIHTMRTEYIDQHHFRFYLKTQAGTYIKEFVHGDFGRTKPNLGLLMKTTADILELDVESVDVDWPPALDN
SIO_010081: PUS10
subclass of: SO_0000673
so part of: PUS10
location: complement(join(95531668..95531706,95656192..95656291,95746966..95747108,95907513..95907630,95907739..95907791,96046378..96046454,96101015..96101071,96180861..96180986,96225927..96226012,96298763..96298827,96435577..96435622,96476372..96476433,96533144..96533249,96912802..96912836,97049760..97049846,97328111..97328236))
location: region:95531668-97328236:-1
so has part: feature:97328111-97328236:-1:exon
so has part: feature:97049760-97049846:-1:exon
so has part: feature:96912802-96912836:-1:exon
so has part: feature:96533144-96533249:-1:exon
so has part: feature:96476372-96476433:-1:exon
so has part: feature:96435577-96435622:-1:exon
so has part: feature:96298763-96298827:-1:exon
so has part: feature:96225927-96226012:-1:exon
so has part: feature:96180861-96180986:-1:exon
so has part: feature:96101015-96101071:-1:exon
so has part: feature:96046378-96046454:-1:exon
so has part: feature:95907739-95907791:-1:exon
so has part: feature:95907513-95907630:-1:exon
so has part: feature:95746966-95747108:-1:exon
so has part: feature:95656192-95656291:-1:exon
so has part: feature:95531668-95531706:-1:exon

XP_043910962.1
type: Protein
SIO_000068: ncbiprotein

position:95531668:-1
position: 95531668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97328236:-1
position: 97328236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97328111-97328236:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97049760-97049846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96912802-96912836:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96533144-96533249:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96476372-96476433:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96435577-96435622:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:96298763-96298827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:96225927-96226012:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:96180861-96180986:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96101015-96101071:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:96046378-96046454:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:95907739-95907791:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:95907513-95907630:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:95746966-95747108:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:95656192-95656291:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:95531668-95531706:-1:exon

PUS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: PUS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA pseudouridine synthase Pus10 isoform X1
translation: MLLLHEKYKPVVRVLLKAGCCCRCVLRFCCVGQQDPYKLPYEELVAELDQFASITVNITSDKPAEDVGPPCKKAKLEETKQGVEETQQNGEMQPHLENADSGSFKRHLGTCVVCLGILQQCCQKEFADQVCEKVNSAGYEFDSVAFSVSLPPQFSVREHALWLFIKQEVGQQLLKKEEIVRLKDVYKWIIHPLLSEELGVPMDSKSLFTVSVVFAHPKTDGDCHFLATFCPDCFRPAKNKQSVFTRLAVVKALEKIKDEDFCKHFPCPPSSSEMGCVTEEIQCVHAPVYIAGRYNKYSRTLPQTPWIIDGERKMESSVEELISEHLMPAFKVSHFNFSSSGREDVDVRTLGKGRPFAIELVSPHRASFTQEEIKALQQKINQSDKIKVRDLQMVTREAVAHMKKGEEEKTKSYSALIWTERAIQENDIQFLNELKELKIFQKTPLRVLHRRPLAVRTRLIHTMRTEYIDQHHFRFYLKTQAGTYIKEFVHGDFGRTKPNLGLLMKTTADILELDVESVDVDWPPALDN
SIO_010081: PUS10
subclass of: SO_0000673
so part of: PUS10
location: complement(join(95531668..95531706,95656192..95656291,95746966..95747108,95907513..95907630,95907739..95907791,96046378..96046454,96101015..96101071,96180861..96180986,96225927..96226012,96298763..96298827,96435577..96435622,96476372..96476433,96533144..96533249,96912802..96912836,97049760..97049846,97221928..97222188,97328111..97328236))
location: region:95531668-97328236:-1
so has part: feature:97328111-97328236:-1:exon
so has part: feature:97221928-97222188:-1:exon
so has part: feature:97049760-97049846:-1:exon
so has part: feature:96912802-96912836:-1:exon
so has part: feature:96533144-96533249:-1:exon
so has part: feature:96476372-96476433:-1:exon
so has part: feature:96435577-96435622:-1:exon
so has part: feature:96298763-96298827:-1:exon
so has part: feature:96225927-96226012:-1:exon
so has part: feature:96180861-96180986:-1:exon
so has part: feature:96101015-96101071:-1:exon
so has part: feature:96046378-96046454:-1:exon
so has part: feature:95907739-95907791:-1:exon
so has part: feature:95907513-95907630:-1:exon
so has part: feature:95746966-95747108:-1:exon
so has part: feature:95656192-95656291:-1:exon
so has part: feature:95531668-95531706:-1:exon

XP_043910952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97328111-97328236:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97221928-97222188:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97049760-97049846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96912802-96912836:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96533144-96533249:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96476372-96476433:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:96435577-96435622:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:96298763-96298827:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:96225927-96226012:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96180861-96180986:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:96101015-96101071:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:96046378-96046454:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:95907739-95907791:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:95907513-95907630:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:95746966-95747108:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:95656192-95656291:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:95531668-95531706:-1:exon

PEX13
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: PEX13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 97369466..97622524
location: region:97369466-97622524:1
so has part: feature:97369466-97622524:1:exon
subclass of: SO_0000010

122788097
type: Gene
SIO_000068: ncbigene

position:97369466:1
position: 97369466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97622524:1
position: 97622524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97369466-97622524:1:exon

PEX13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: PEX13
product: peroxisomal biogenesis factor 13
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055037.1
SIO_010081: PEX13
subclass of: SO_0000673
so part of: PEX13
location: join(97369466..97369553,97369837..97369902,97449154..97449851,97564629..97564754,97622212..97622524)
location: region:97369466-97622524:1
so has part: feature:97369466-97369553:1:exon
so has part: feature:97369837-97369902:1:exon
so has part: feature:97449154-97449851:1:exon
so has part: feature:97564629-97564754:1:exon
so has part: feature:97622212-97622524:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:97369466-97369553:1:exon

position:97369553:1
position: 97369553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:97369837-97369902:1:exon

position:97369837:1
position: 97369837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97369902:1
position: 97369902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:97449154-97449851:1:exon

position:97449154:1
position: 97449154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97449851:1
position: 97449851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:97564629-97564754:1:exon

position:97564629:1
position: 97564629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97564754:1
position: 97564754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:97622212-97622524:1:exon

position:97622212:1
position: 97622212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PEX13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: PEX13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisome biogenesis factor 13
translation: MSSHPPPKPWERRMSSNIPSFQSSDLGSSLPTRSVQPVVSRIPPPVPTRPSQQSGGSSITRYRPAYNSFSAAYSPYGSSFYGSCSPYGYGYGGLGYNRFRTDDIPPSRFVRQAEESSRGAFESVESIVHAFASVSMMMDATFSAVYNSFRAVLDVANHFSRLKIHFTKVFSAFALVRTLRYLYIRLQRLLGLRKKSETEDLWAESMGAVTSANTEDRASSSGKSWPIFMFFAVVLGGPYLIWKLLCSENESESNASTSWASGEDDHVVGRADYDFCAASDEEISFCTGDVLNLAPKEQQPKIRGWLLASLNEQIGLVPANYIKILGKRKGRRHMDLEKIAEQEHIFMTGPPSTEAKAAVNATEKQEEAFESAFTGAIKR
SIO_010081: PEX13
subclass of: SO_0000673
so part of: PEX13
location: join(97369838..97369902,97449154..97449851,97564629..97564754,97622212..97622462)
location: region:97369838-97622462:1
so has part: feature:97369838-97369902:1:exon
so has part: feature:97449154-97449851:1:exon
so has part: feature:97564629-97564754:1:exon
so has part: feature:97622212-97622462:1:exon

XP_043910972.1
type: Protein
SIO_000068: ncbiprotein

position:97369838:1
position: 97369838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97622462:1
position: 97622462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97369838-97369902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97449154-97449851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97564629-97564754:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97622212-97622462:1:exon

LOC122788108
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122788108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(97996290..98589594)
location: region:97996290-98589594:-1
so has part: feature:97996290-98589594:-1:exon
subclass of: SO_0000010

122788108
type: Gene
SIO_000068: ncbigene

position:97996290:-1
position: 97996290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98589594:-1
position: 98589594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97996290-98589594:-1:exon

LOC122788108
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: LOC122788108
product: golgin subfamily A member 6-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_044055046.1
SIO_010081: LOC122788108
subclass of: SO_0000673
so part of: LOC122788108
location: complement(join(97996290..97996680,98014572..98014677,98193750..98193865,98229408..98229566,98360226..98360351,98589104..98589594))
location: region:97996290-98589594:-1
so has part: feature:98589104-98589594:-1:exon
so has part: feature:98360226-98360351:-1:exon
so has part: feature:98229408-98229566:-1:exon
so has part: feature:98193750-98193865:-1:exon
so has part: feature:98014572-98014677:-1:exon
so has part: feature:97996290-97996680:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:98589104-98589594:-1:exon

position:98589104:-1
position: 98589104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:98360226-98360351:-1:exon

position:98360226:-1
position: 98360226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98360351:-1
position: 98360351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:98229408-98229566:-1:exon

position:98229408:-1
position: 98229408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98229566:-1
position: 98229566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:98193750-98193865:-1:exon

position:98193750:-1
position: 98193750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98193865:-1
position: 98193865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:98014572-98014677:-1:exon

position:98014572:-1
position: 98014572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98014677:-1
position: 98014677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:97996290-97996680:-1:exon

position:97996680:-1
position: 97996680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122788108
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: LOC122788108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 6-like protein 2
translation: MSSTRLKHSVARGGTVRHLGFTSQKSFGSAHAHGKEELETSHCITGVAMAVPETKSHSFQIKVEKMRQHIPPAESAQVKLEKLKEHTPPTTKKNKMVVNKSVQTYATEKNIQECKELLVKCQVLEAQLMEKEDTIRNLNQSLQNKNTEFVKAVEIEQRRHEETKCKMKRTETLLMEKAQLLQDTTNNYEETIQKLKKEHEEAVAILKMRSESEINHRDNKITNLKKQISDILKGKSWERQQQLEELRKELENLTEEAQFLQRKLKEEQLNKQECANCRSMAQKLEEKTLQLRLKERTVEELQAICRKTEKQLAQQVY
SIO_010081: LOC122788108
subclass of: SO_0000673
so part of: LOC122788108
location: complement(join(97996543..97996680,98014572..98014677,98193750..98193865,98229408..98229566,98360226..98360351,98589104..98589412))
location: region:97996543-98589412:-1
so has part: feature:98589104-98589412:-1:exon
so has part: feature:98360226-98360351:-1:exon
so has part: feature:98229408-98229566:-1:exon
so has part: feature:98193750-98193865:-1:exon
so has part: feature:98014572-98014677:-1:exon
so has part: feature:97996543-97996680:-1:exon

XP_043910981.1
type: Protein
SIO_000068: ncbiprotein

position:97996543:-1
position: 97996543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98589412:-1
position: 98589412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98589104-98589412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98360226-98360351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98229408-98229566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98193750-98193865:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98014572-98014677:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97996543-97996680:-1:exon

SANBR
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: SANBR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 98668493..99248645
location: region:98668493-99248645:1
so has part: feature:98668493-99248645:1:exon
subclass of: SO_0000010

122792335
type: Gene
SIO_000068: ncbigene

position:98668493:1
position: 98668493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99248645:1
position: 99248645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98668493-99248645:1:exon

SANBR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: SANBR
product: SANT and BTB domain regulator of CSR
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_044060133.1
SIO_010081: SANBR
subclass of: SO_0000673
so part of: SANBR
location: join(98668493..98668850,99009515..99009680,99104841..99105027,99248551..99248645)
location: region:98668493-99248645:1
so has part: feature:98668493-98668850:1:exon
so has part: feature:99009515-99009680:1:exon
so has part: feature:99104841-99105027:1:exon
so has part: feature:99248551-99248645:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:98668493-98668850:1:exon

position:98668850:1
position: 98668850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:99009515-99009680:1:exon

position:99009515:1
position: 99009515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99009680:1
position: 99009680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:99104841-99105027:1:exon

position:99104841:1
position: 99104841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99105027:1
position: 99105027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:99248551-99248645:1:exon

position:99248551:1
position: 99248551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SANBR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: SANBR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA1841 homolog
translation: MNHVCSENNNFPYGNNQMVLDIILYSLLEVRQPIDWDSVSRLVPGFSPKECSRRYEELKNNGVLSPVDNQCTPVMVNKGSPTQTLASYIKATLLTQEESTDQSITHCGISVTGRAGTSSGRKISSDAEKCSDKNEESVDETQG
SIO_010081: SANBR
subclass of: SO_0000673
so part of: SANBR
location: join(99009531..99009680,99104841..99105027,99248551..99248645)
location: region:99009531-99248645:1
so has part: feature:99009531-99009680:1:exon
so has part: feature:99104841-99105027:1:exon
so has part: feature:99248551-99248645:1:exon

XP_043916068.1
type: Protein
SIO_000068: ncbiprotein

position:99009531:1
position: 99009531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99009531-99009680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99104841-99105027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99248551-99248645:1:exon

ASB3
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: ASB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(103374483..104529912)
location: region:103374483-104529912:-1
so has part: feature:103374483-104529912:-1:exon
subclass of: SO_0000010

122788118
type: Gene
SIO_000068: ncbigene

position:103374483:-1
position: 103374483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104529912:-1
position: 104529912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103374483-104529912:-1:exon

ASB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: ASB3
product: ankyrin repeat and SOCS box containing 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055058.1
SIO_010081: ASB3
subclass of: SO_0000673
so part of: ASB3
location: complement(join(103374483..103374861,103556652..103556785,103649883..103650134,104027088..104027285,104047502..104047679,104282773..104282908,104342931..104343043,104494529..104494684,104529350..104529912))
location: region:103374483-104529912:-1
so has part: feature:104529350-104529912:-1:exon
so has part: feature:104494529-104494684:-1:exon
so has part: feature:104342931-104343043:-1:exon
so has part: feature:104282773-104282908:-1:exon
so has part: feature:104047502-104047679:-1:exon
so has part: feature:104027088-104027285:-1:exon
so has part: feature:103649883-103650134:-1:exon
so has part: feature:103556652-103556785:-1:exon
so has part: feature:103374483-103374861:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104529350-104529912:-1:exon

position:104529350:-1
position: 104529350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:104494529-104494684:-1:exon

position:104494529:-1
position: 104494529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104494684:-1
position: 104494684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:104342931-104343043:-1:exon

position:104342931:-1
position: 104342931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104343043:-1
position: 104343043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:104282773-104282908:-1:exon

position:104282773:-1
position: 104282773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104282908:-1
position: 104282908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:104047502-104047679:-1:exon

position:104047502:-1
position: 104047502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104047679:-1
position: 104047679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:104027088-104027285:-1:exon

position:104027088:-1
position: 104027088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104027285:-1
position: 104027285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:103649883-103650134:-1:exon

position:103649883:-1
position: 103649883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103650134:-1
position: 103650134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:103556652-103556785:-1:exon

position:103556652:-1
position: 103556652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103556785:-1
position: 103556785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:103374483-103374861:-1:exon

position:103374861:-1
position: 103374861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: ASB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 3
translation: MDFTEAYDDTCSTVGHVVREGNVKLLRRLIKQGRRVNVADNRGWMPIHEAASRNTVGCLKLLIQAAPSRSYINAKSFEGETPLFLAARNGALKSAEVLLKAGADPNESADEETALFVAVEKGHTDVAKLLLRHGANINGPHSKCGWNTLHQAAFQGNVLVLQLLLEKGADHESKDDFGITPLFIAAQYGKVESLRILIANGADVNCQASDRATPLLIAAQEGHSECVDLLLSNGADANLYCNDQGWQLPIHAASQMGRVSVLNLLIPVTDRVCDRGEDKLSPVYSAVYGQQEECLKILLNAGYSPDAQNCLYFGYMSPLCMALLNKSYRIVFILLEYNATLKENHLTYCLGWQDSSVFRHLLKKGCPLPSSKHLPLFIEFGVAVQEKYKEWLPYLINAGFNPLHLLTELWIKSVCDDALNFTLEFTNWKRLPPAVEQALASHAENSNWVPKNHFGAVPNLTHLCRLEIRSIMQDKLPSELYIPKLPLPSCLHEFLLYFDIFRLYGIPEVAVSLDHSG
SIO_010081: ASB3
subclass of: SO_0000673
so part of: ASB3
location: complement(join(103374671..103374861,103556652..103556785,103649883..103650134,104027088..104027285,104047502..104047679,104282773..104282908,104342931..104343043,104494529..104494684,104529350..104529545))
location: region:103374671-104529545:-1
so has part: feature:104529350-104529545:-1:exon
so has part: feature:104494529-104494684:-1:exon
so has part: feature:104342931-104343043:-1:exon
so has part: feature:104282773-104282908:-1:exon
so has part: feature:104047502-104047679:-1:exon
so has part: feature:104027088-104027285:-1:exon
so has part: feature:103649883-103650134:-1:exon
so has part: feature:103556652-103556785:-1:exon
so has part: feature:103374671-103374861:-1:exon

XP_043910993.1
type: Protein
SIO_000068: ncbiprotein

position:103374671:-1
position: 103374671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104529545:-1
position: 104529545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104529350-104529545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104494529-104494684:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104342931-104343043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104282773-104282908:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104047502-104047679:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:104027088-104027285:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:103649883-103650134:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:103556652-103556785:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:103374671-103374861:-1:exon

CHAC2
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: CHAC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 104530147..104849694
location: region:104530147-104849694:1
so has part: feature:104530147-104849694:1:exon
subclass of: SO_0000010

122788126
type: Gene
SIO_000068: ncbigene

position:104530147:1
position: 104530147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104849694:1
position: 104849694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104530147-104849694:1:exon

CHAC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: CHAC2
product: ChaC glutathione specific gamma-glutamylcyclotransferase 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055070.1
SIO_010081: CHAC2
subclass of: SO_0000673
so part of: CHAC2
location: join(104530147..104530393,104709897..104709932,104848913..104849694)
location: region:104530147-104849694:1
so has part: feature:104530147-104530393:1:exon
so has part: feature:104709897-104709932:1:exon
so has part: feature:104848913-104849694:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104530147-104530393:1:exon

position:104530393:1
position: 104530393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:104709897-104709932:1:exon

position:104709897:1
position: 104709897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104709932:1
position: 104709932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:104848913-104849694:1:exon

position:104848913:1
position: 104848913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHAC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: CHAC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione-specific gamma-glutamylcyclotransferase 2
translation: MWVFGYGSLIWKVDFPYEKKLIGYIRGFSRRFWQGSTDHRGVPGKPGRVVTLIEDPEGCVWGVAYRLPSGKEEEVKQYLDFREKCGYRSTYVTFYPKDKAVGEFDVLLYVGTHDNPNYLGPAPLEDIAKQILCAVGPSGRNTEYLLELANSIRNLVPDDTDEHIFTLEKMVKEHLEKSNKNSI
SIO_010081: CHAC2
subclass of: SO_0000673
so part of: CHAC2
location: join(104530259..104530393,104709897..104709932,104848913..104849293)
location: region:104530259-104849293:1
so has part: feature:104530259-104530393:1:exon
so has part: feature:104709897-104709932:1:exon
so has part: feature:104848913-104849293:1:exon

XP_043911005.1
type: Protein
SIO_000068: ncbiprotein

position:104530259:1
position: 104530259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104849293:1
position: 104849293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104530259-104530393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104709897-104709932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104848913-104849293:1:exon

ERLEC1
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: ERLEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 105104042..106435854
location: region:105104042-106435854:1
so has part: feature:105104042-106435854:1:exon
subclass of: SO_0000010

122788134
type: Gene
SIO_000068: ncbigene

position:105104042:1
position: 105104042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106435854:1
position: 106435854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105104042-106435854:1:exon

ERLEC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: ERLEC1
product: endoplasmic reticulum lectin 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055082.1
SIO_010081: ERLEC1
subclass of: SO_0000673
so part of: ERLEC1
location: join(105104042..105104279,105274577..105274681,105319210..105319290,105504752..105504829,105504933..105505001,105513625..105513669,105542832..105542837,105739084..105739307,105838266..105838398,105920792..105920953,106028939..106028998,106141529..106141653,106198029..106198106,106304119..106304194,106435240..106435854)
location: region:105104042-106435854:1
so has part: feature:105104042-105104279:1:exon
so has part: feature:105274577-105274681:1:exon
so has part: feature:105319210-105319290:1:exon
so has part: feature:105504752-105504829:1:exon
so has part: feature:105504933-105505001:1:exon
so has part: feature:105513625-105513669:1:exon
so has part: feature:105542832-105542837:1:exon
so has part: feature:105739084-105739307:1:exon
so has part: feature:105838266-105838398:1:exon
so has part: feature:105920792-105920953:1:exon
so has part: feature:106028939-106028998:1:exon
so has part: feature:106141529-106141653:1:exon
so has part: feature:106198029-106198106:1:exon
so has part: feature:106304119-106304194:1:exon
so has part: feature:106435240-106435854:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:105104042-105104279:1:exon

position:105104279:1
position: 105104279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:105274577-105274681:1:exon

position:105274577:1
position: 105274577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105274681:1
position: 105274681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:105319210-105319290:1:exon

position:105319210:1
position: 105319210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105319290:1
position: 105319290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:105504752-105504829:1:exon

position:105504752:1
position: 105504752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105504829:1
position: 105504829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:105504933-105505001:1:exon

position:105504933:1
position: 105504933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105505001:1
position: 105505001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:105513625-105513669:1:exon

position:105513625:1
position: 105513625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105513669:1
position: 105513669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:105542832-105542837:1:exon

position:105542832:1
position: 105542832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105542837:1
position: 105542837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:105739084-105739307:1:exon

position:105739084:1
position: 105739084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105739307:1
position: 105739307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:105838266-105838398:1:exon

position:105838266:1
position: 105838266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105838398:1
position: 105838398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:105920792-105920953:1:exon

position:105920792:1
position: 105920792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105920953:1
position: 105920953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:106028939-106028998:1:exon

position:106028939:1
position: 106028939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106028998:1
position: 106028998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:106141529-106141653:1:exon

position:106141529:1
position: 106141529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106141653:1
position: 106141653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:106198029-106198106:1:exon

position:106198029:1
position: 106198029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106198106:1
position: 106198106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:106304119-106304194:1:exon

position:106304119:1
position: 106304119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106304194:1
position: 106304194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:106435240-106435854:1:exon

position:106435240:1
position: 106435240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERLEC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: ERLEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum lectin 1
translation: MCSLRDACALYFLFLHIELSLYSITASGIPVFTDDVSFKIHWPGQELTLPTGSALYRDDNYIIMTTADSEKYRCLLPLMSGDMEDDAKDYTGPSPAELLEPLFKQSSCSYRIESFWTYEVCHGKHVRQYHEEKETGQKINIQEYYLGAVVKKSQTATAGIKRDRREDSGTGKQLQTEIPSKNIEGQMTPFYPVHMGNGTPCTLKQDQPRATTVMYVCHPEAKHEILTVAEVTTCEYEVIILTPLLCNHPKYRFKSSPVNDIFCQSLPGSPLRPKSLDSFEKQQEELMKSQFRRDIEDEASSTKDEKFSSLHKPVSVGGQQQITVGTTHISRLTDEQLIKEFLSGSYCFHGGVGWWKYEFCYGKHVHQYHEDKETGKSSVVVGTWNVQEHMDWAKKNVARSYLLRDDGTQKVKVVSHFYGHGDLCDLTGKPRQVIVKLKCKESESPHAVTVYMLEPQTCQYILGVESPVICKILDTADENGLLSIPS
SIO_010081: ERLEC1
subclass of: SO_0000673
so part of: ERLEC1
location: join(105104133..105104279,105274577..105274681,105319210..105319290,105504752..105504829,105504933..105505001,105513625..105513669,105542832..105542837,105739084..105739307,105838266..105838398,105920792..105920953,106028939..106028998,106141529..106141653,106198029..106198106,106304119..106304194,106435240..106435311)
location: region:105104133-106435311:1
so has part: feature:105104133-105104279:1:exon
so has part: feature:105274577-105274681:1:exon
so has part: feature:105319210-105319290:1:exon
so has part: feature:105504752-105504829:1:exon
so has part: feature:105504933-105505001:1:exon
so has part: feature:105513625-105513669:1:exon
so has part: feature:105542832-105542837:1:exon
so has part: feature:105739084-105739307:1:exon
so has part: feature:105838266-105838398:1:exon
so has part: feature:105920792-105920953:1:exon
so has part: feature:106028939-106028998:1:exon
so has part: feature:106141529-106141653:1:exon
so has part: feature:106198029-106198106:1:exon
so has part: feature:106304119-106304194:1:exon
so has part: feature:106435240-106435311:1:exon

XP_043911017.1
type: Protein
SIO_000068: ncbiprotein

position:105104133:1
position: 105104133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106435311:1
position: 106435311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105104133-105104279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105274577-105274681:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105319210-105319290:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105504752-105504829:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:105504933-105505001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:105513625-105513669:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:105542832-105542837:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:105739084-105739307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105838266-105838398:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105920792-105920953:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:106028939-106028998:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106141529-106141653:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106198029-106198106:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:106304119-106304194:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:106435240-106435311:1:exon

LOC122788141
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122788141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 106739928..106743970
location: region:106739928-106743970:1
so has part: feature:106739928-106743970:1:exon
subclass of: SO_0000010

122788141
type: Gene
SIO_000068: ncbigene

position:106739928:1
position: 106739928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106743970:1
position: 106743970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106739928-106743970:1:exon

LOC122788141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: LOC122788141
product: toll-like receptor 2 type-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_044055095.1
SIO_010081: LOC122788141
subclass of: SO_0000673
so part of: LOC122788141
location: 106739928..106743970
location: region:106739928-106743970:1
so has part: feature:106739928-106743970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106739928-106743970:1:exon

LOC122788141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: LOC122788141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll-like receptor 2 type-2
translation: MEPFHLQAYKINGSLFLNFSYSNLTLIPISDIPKAAKRIDLSHNAIYIIRRTDFIGLNLLTALDLSHNQIEIIESEAFANLSNLNFLDISLNKQLGQIPELGPNLKVLQIHGTSVHSISGNNFNQLQNLSLDTVGIFDFAHFSNLEILHLYVHLIPYLDFSVENEHHLKSLIISQNCSPEEEPVIPRTLWILKQFWKTELDNVYLYGVFHWMDIVRVLYLFPGPFISNITITGTFRLLPSCKRDACEFQKNKFSSDITIPNQNITLQLQQQQEMHLGQETSLLSSFFMLQLQNIFELHKHVVSYNTSLTFLDKFINICSSPVQGILDLSNIDFNSTALFSDGLNITECKIHCDKVLLLNVSRSSLKLDLLSLVSIVNVMVNLHHIDASFNFLYISTGNINTDCYFASSNLLILNISHNPINSLADICIPSTIRILDLSFTNLIEIPESFANKVTNLETIYLLGNRFVFQDEKCPEQSDTYCSISTCVYTESWSLVNTRVTPIKSIPSAVWHLELANCSIVELPEWLPLQMKGLRNVSLRNNYIFAVPCFSSSLEHLDVSNNQIKNLPLCLQTLSNLTVLKLQYNNLPALNTETLPLTLTDMDVSGNKLDALPLNLSRAMRLLQHFRVSENVITKLYLESLPFPLEYLDLSHNLVSVLPDGLGQHLTNLKYLNVSWNKISFLQTGSLPVSLIMLDVSYNAITTITKETFMSLTDLHFLTITENSFFCNCDLYWLVSTFTSRKNLMINGWDSLICAFPQERRGTFVKNFNLSEIDCNLGLQLAITASVATIIVLVTTLLCWYYNVIWYVQMGWYWCMAKRKQYDKMEDKLYDAFLSYSESDASWIKEELLKKLEGNGFRICYHERDFRPGHPVLGNIFYCIENSHKVIFILSMGFVNSCWCQYELYFAEHRVLNENEDSLIMLVLEDLPPDCVPQKFIKLRKLLKKKTYLKWSPEETKQAIFWHQLISILRTCNSPFVETGIRLEESINT
SIO_010081: LOC122788141
subclass of: SO_0000673
so part of: LOC122788141
location: 106739971..106742937
location: region:106739971-106742937:1
so has part: feature:106739971-106742937:1:exon

XP_043911030.1
type: Protein
SIO_000068: ncbiprotein

position:106739971:1
position: 106739971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106742937:1
position: 106742937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106739971-106742937:1:exon

GPR75
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: GPR75
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(107324205..107327448)
location: region:107324205-107327448:-1
so has part: feature:107324205-107327448:-1:exon
subclass of: SO_0000010

122788146
type: Gene
SIO_000068: ncbigene

position:107324205:-1
position: 107324205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107327448:-1
position: 107327448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107324205-107327448:-1:exon

GPR75
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: GPR75
product: G protein-coupled receptor 75
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055109.1
SIO_010081: GPR75
subclass of: SO_0000673
so part of: GPR75
location: complement(join(107324205..107326258,107326977..107327448))
location: region:107324205-107327448:-1
so has part: feature:107326977-107327448:-1:exon
so has part: feature:107324205-107326258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:107326977-107327448:-1:exon

position:107326977:-1
position: 107326977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:107324205-107326258:-1:exon

position:107326258:-1
position: 107326258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR75
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: GPR75
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 75
translation: MNLTNEEAELVDQKLSDPFSNSSLLHTVNGTFRDFQEIIHTATLVTCTCLLVIIFCLGSCGNLVVFLSFFDPAFRKFRTNFDFMILNLSFCDLFICCITAPMFAFVLFFDAASNVPEAFCFTFHLTSSGFIIMSLKTVAVIALHRLRMVLGQQPNKTASFPCTLLLTAVLWTTSFTLATLATLRTWRSRICLPMFSLINEDGKIILYLYIIDFTSCVGIVSVSYIMIAQALRKNAQVRKCPIITVDTSRPQPFIATGVDGVQCALPALYRNQNYNKLQHIQTHAYTKKLSQDPMAGNRLQLVSAVNLSATKDSKAVGTCVVIVLSVLVCCVPLGIALVQDALFSANSFLLYQFELCGFTLVFFKSGLNPFIYSRNSAGLRRRVLWCIQYVALGFLCCKQKTRLRAMGKGSLEVNRNKSSHHETNSAYMLSPKPQKKFVDQACGPSHSKESVLSPKVSVGYHHYAQSSSTPINTRIEPYYSIYNSSPSPEASTPNSLQPVNSTFGFAKSYIAMQYHTTSELMQDYESNCKQIPVPSV
SIO_010081: GPR75
subclass of: SO_0000673
so part of: GPR75
location: complement(107324545..107326155)
location: region:107324545-107326155:-1
so has part: feature:107324545-107326155:-1:exon

XP_043911044.1
type: Protein
SIO_000068: ncbiprotein

position:107324545:-1
position: 107324545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107326155:-1
position: 107326155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107324545-107326155:-1:exon

PSME4
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: PSME4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(107951620..110941879)
location: region:107951620-110941879:-1
so has part: feature:107951620-110941879:-1:exon
subclass of: SO_0000010

122788153
type: Gene
SIO_000068: ncbigene

position:107951620:-1
position: 107951620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110941879:-1
position: 110941879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107951620-110941879:-1:exon

PSME4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: PSME4
product: proteasome activator subunit 4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055122.1
SIO_010081: PSME4
subclass of: SO_0000673
so part of: PSME4
location: complement(join(107951620..107952060,107976596..107976734,108033207..108033340,108078404..108078566,108178276..108178431,108241011..108241139,108298717..108298802,108385479..108385687,108486806..108486937,108526209..108526300,108607454..108607558,108716818..108716970,108746556..108746681,108756129..108756198,108800198..108800351,108937399..108937480,109020460..109020589,109059687..109059740,109150730..109150866,109215387..109215596,109345652..109345777,109345906..109346001,109346106..109346168,109346275..109346373,109409667..109409722,109524017..109524073,109537895..109537950,109634334..109634429,109705027..109705184,109813454..109813669,109840264..109840331,109862534..109862603,109919742..109919840,109948025..109948175,110047064..110047128,110095043..110095132,110121531..110121717,110132080..110132345,110212959..110213051,110259926..110260048,110344760..110344834,110378548..110378611,110453134..110453283,110520501..110520545,110692466..110692582,110722586..110722726,110940831..110941879))
location: region:107951620-110941879:-1
so has part: feature:110940831-110941879:-1:exon
so has part: feature:110722586-110722726:-1:exon
so has part: feature:110692466-110692582:-1:exon
so has part: feature:110520501-110520545:-1:exon
so has part: feature:110453134-110453283:-1:exon
so has part: feature:110378548-110378611:-1:exon
so has part: feature:110344760-110344834:-1:exon
so has part: feature:110259926-110260048:-1:exon
so has part: feature:110212959-110213051:-1:exon
so has part: feature:110132080-110132345:-1:exon
so has part: feature:110121531-110121717:-1:exon
so has part: feature:110095043-110095132:-1:exon
so has part: feature:110047064-110047128:-1:exon
so has part: feature:109948025-109948175:-1:exon
so has part: feature:109919742-109919840:-1:exon
so has part: feature:109862534-109862603:-1:exon
so has part: feature:109840264-109840331:-1:exon
so has part: feature:109813454-109813669:-1:exon
so has part: feature:109705027-109705184:-1:exon
so has part: feature:109634334-109634429:-1:exon
so has part: feature:109537895-109537950:-1:exon
so has part: feature:109524017-109524073:-1:exon
so has part: feature:109409667-109409722:-1:exon
so has part: feature:109346275-109346373:-1:exon
so has part: feature:109346106-109346168:-1:exon
so has part: feature:109345906-109346001:-1:exon
so has part: feature:109345652-109345777:-1:exon
so has part: feature:109215387-109215596:-1:exon
so has part: feature:109150730-109150866:-1:exon
so has part: feature:109059687-109059740:-1:exon
so has part: feature:109020460-109020589:-1:exon
so has part: feature:108937399-108937480:-1:exon
so has part: feature:108800198-108800351:-1:exon
so has part: feature:108756129-108756198:-1:exon
so has part: feature:108746556-108746681:-1:exon
so has part: feature:108716818-108716970:-1:exon
so has part: feature:108607454-108607558:-1:exon
so has part: feature:108526209-108526300:-1:exon
so has part: feature:108486806-108486937:-1:exon
so has part: feature:108385479-108385687:-1:exon
so has part: feature:108298717-108298802:-1:exon
so has part: feature:108241011-108241139:-1:exon
so has part: feature:108178276-108178431:-1:exon
so has part: feature:108078404-108078566:-1:exon
so has part: feature:108033207-108033340:-1:exon
so has part: feature:107976596-107976734:-1:exon
so has part: feature:107951620-107952060:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110940831-110941879:-1:exon

position:110940831:-1
position: 110940831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:110722586-110722726:-1:exon

position:110722586:-1
position: 110722586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110722726:-1
position: 110722726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:110692466-110692582:-1:exon

position:110692466:-1
position: 110692466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110692582:-1
position: 110692582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:110520501-110520545:-1:exon

position:110520501:-1
position: 110520501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110520545:-1
position: 110520545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:110453134-110453283:-1:exon

position:110453134:-1
position: 110453134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110453283:-1
position: 110453283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:110378548-110378611:-1:exon

position:110378548:-1
position: 110378548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110378611:-1
position: 110378611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:110344760-110344834:-1:exon

position:110344760:-1
position: 110344760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110344834:-1
position: 110344834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:110259926-110260048:-1:exon

position:110259926:-1
position: 110259926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110260048:-1
position: 110260048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:110212959-110213051:-1:exon

position:110212959:-1
position: 110212959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110213051:-1
position: 110213051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:110132080-110132345:-1:exon

position:110132080:-1
position: 110132080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110132345:-1
position: 110132345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:110121531-110121717:-1:exon

position:110121531:-1
position: 110121531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110121717:-1
position: 110121717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:110095043-110095132:-1:exon

position:110095043:-1
position: 110095043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110095132:-1
position: 110095132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:110047064-110047128:-1:exon

position:110047064:-1
position: 110047064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110047128:-1
position: 110047128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:109948025-109948175:-1:exon

position:109948025:-1
position: 109948025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109948175:-1
position: 109948175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:109919742-109919840:-1:exon

position:109919742:-1
position: 109919742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109919840:-1
position: 109919840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:109862534-109862603:-1:exon

position:109862534:-1
position: 109862534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109862603:-1
position: 109862603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:109840264-109840331:-1:exon

position:109840264:-1
position: 109840264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109840331:-1
position: 109840331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:109813454-109813669:-1:exon

position:109813454:-1
position: 109813454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109813669:-1
position: 109813669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:109705027-109705184:-1:exon

position:109705027:-1
position: 109705027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109705184:-1
position: 109705184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:109634334-109634429:-1:exon

position:109634334:-1
position: 109634334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109634429:-1
position: 109634429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:109537895-109537950:-1:exon

position:109537895:-1
position: 109537895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109537950:-1
position: 109537950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:109524017-109524073:-1:exon

position:109524017:-1
position: 109524017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109524073:-1
position: 109524073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:109409667-109409722:-1:exon

position:109409667:-1
position: 109409667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109409722:-1
position: 109409722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:109346275-109346373:-1:exon

position:109346275:-1
position: 109346275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109346373:-1
position: 109346373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:109346106-109346168:-1:exon

position:109346106:-1
position: 109346106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109346168:-1
position: 109346168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:109345906-109346001:-1:exon

position:109345906:-1
position: 109345906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109346001:-1
position: 109346001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:109345652-109345777:-1:exon

position:109345652:-1
position: 109345652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109345777:-1
position: 109345777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:109215387-109215596:-1:exon

position:109215387:-1
position: 109215387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109215596:-1
position: 109215596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:109150730-109150866:-1:exon

position:109150730:-1
position: 109150730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109150866:-1
position: 109150866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:109059687-109059740:-1:exon

position:109059687:-1
position: 109059687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109059740:-1
position: 109059740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:109020460-109020589:-1:exon

position:109020460:-1
position: 109020460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109020589:-1
position: 109020589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:108937399-108937480:-1:exon

position:108937399:-1
position: 108937399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108937480:-1
position: 108937480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:108800198-108800351:-1:exon

position:108800198:-1
position: 108800198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108800351:-1
position: 108800351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:108756129-108756198:-1:exon

position:108756129:-1
position: 108756129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108756198:-1
position: 108756198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:108746556-108746681:-1:exon

position:108746556:-1
position: 108746556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108746681:-1
position: 108746681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:108716818-108716970:-1:exon

position:108716818:-1
position: 108716818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108716970:-1
position: 108716970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:108607454-108607558:-1:exon

position:108607454:-1
position: 108607454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108607558:-1
position: 108607558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:108526209-108526300:-1:exon

position:108526209:-1
position: 108526209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108526300:-1
position: 108526300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:108486806-108486937:-1:exon

position:108486806:-1
position: 108486806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108486937:-1
position: 108486937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:108385479-108385687:-1:exon

position:108385479:-1
position: 108385479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108385687:-1
position: 108385687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:108298717-108298802:-1:exon

position:108298717:-1
position: 108298717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108298802:-1
position: 108298802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:108241011-108241139:-1:exon

position:108241011:-1
position: 108241011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108241139:-1
position: 108241139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:108178276-108178431:-1:exon

position:108178276:-1
position: 108178276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108178431:-1
position: 108178431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:108078404-108078566:-1:exon

position:108078404:-1
position: 108078404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108078566:-1
position: 108078566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:108033207-108033340:-1:exon

position:108033207:-1
position: 108033207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108033340:-1
position: 108033340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:107976596-107976734:-1:exon

position:107976596:-1
position: 107976596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107976734:-1
position: 107976734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:107951620-107952060:-1:exon

position:107952060:-1
position: 107952060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSME4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: PSME4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome activator complex subunit 4
translation: MDIVTERAQTLGFVPQKEIVYNKLLPYADKLDQESNEFLASIKVNLGRAVQLRELWPGVLFWTRKLSTYIRLYGRKFSKEDHVLFIKMLYELVTVPRLEISMMQGFARLLINLLKKKELLSRADLQLPWRPLYDMVESILYSKTEHLGLNWFPNSVESILKTLVKCCRVYFPDDATAEMLEEWRPLMCPFDVTMQKAISYLELFLPTSLPCELHHKGFKLWFEELMNLWISVQSLPQWEGHLVSLFARLANDNIGYIDWDPYIPKIFTRLLRSLNLPVGSSQVVVPKYSSNTYDMGQAVLWVTSLLGGPSKLAQKHLSGLFNSITTFYHPSNHGRWLLKLMKLLQRLPASVVKRLHRERYKKPTWMTPVPDSCKLTDQDVTDFVESIKQPVLLGMFSRTGSLEAAQALQNLALMRPELVIPPVLERTYPALETLTEPHQLTATLSCVIGVARSLVSRNKWFPEGPTHMLPLLIRALPGVDPNDFSKCMITFQFIATFATLVPFVDCSSALQERDDLSEVERELCSASAEFEDFVLQFMDRCFALIESSTLEQTREETETEKMTHLESLVELGLSSTFSTILTQCSKEIFKAALDKVFNFAITNIFETRVSGRMVADMCRAAVKCHPGEALKLFVPHCCSVIAQLTVNDDVLKEEELDKELLWKLQLLSEITRVDGEKLVFYKKELVNTLQRTLHLTCKQGYTLACNLLYHLLRSTTLTYPKEYCSVPDGFNKPLSQYFPIKDWGKPGNLWNLNIQWHVPSSEEIAFAYQLLDSFLQPELNRLERYASGELELLRDDVQQSLSIVHNCLLGSGNLLPPLEGVKVTDLVPTLVPLKETKLFTGIKPDYSKDNYRKSIAEVIRKVLHHMLDNSEDDTKSMFMIIKIIGDMLHFRGSHKQEFDSRWKSFSLVKRSMEDRLHGRKQHIRALLIDRVMLQHELRTLTVEGCEYKTVHQDLIRDLFHLSTSSYSQVRSKAQQTFFTALGSYNFCCRDVIPLVLDFLKRKDISQQQFKGALYCLLGNTGGVCLANLHDWDCIVQTWPAIVSCGLSKTMSLEKPSIVRLFDDLAEKIHRQYETIGLDFKIPERCVEQAILLQQSRYPPANLPPLTAEELEMGLKRQQEKNAEALKHYETLINFLLDLLDQRNLPWKFEHLAIGFLSLLLRDDLQLPNRAITFFIQCLVHDALVVRKMAISAVAGILKQLKRPHKKVTVDPYIISGCRKPTSLTIGDRPDNQWLQYDSSCLPKTKEAWENCPFVEKTHWGYYTWPRKLLVYAPVVDQPKLGRTRDEMSEAERIIFDFFSDPKFLELLIKFLSLEDRKGKDTFNPRRFCLFKGLFRNYDEAFLPALIPHMERLAADSHESTQRCLAEIIAGLIRGCKHWTFQKVENLWNFLCPLLRTALSSITVETYSDWGTCIATACESRDPRKLHWLFEMLIESPVSGEGGSFVDACRLYVLQGGLSQQEWRVAELLNRLLQYLEPKLTQVYKNVRERIGSVLTYVFMIDLSLPNTLPSRSPRTSEFISRVFVGLKPLMEADEEIQNHVVEDNGICEQDERTQAIKLLKTVLKWLMSSAGRTFSTPVPEQLQLLPVLLKIAPVENDDSYDELKRDAKMCLSLMSQGVLYPQHVPLVVNVLKQSAGSSSWHARYTILTYLQTVVFYNLFIFHNNEEAVQAIKWLVLKLLEDEQLEVREMAATTLSGLLQCGFLVMDGPLQNHFEQLCKTRLPKKKKRGPGAVVDTIPPADLVKRHAGVLGLSACVLSSPYDVPTWMPQLLMDLSAHLNDPQPIEMTVKKTLSNFRRTHHDNWQEHKQQFTDDQLIVLTDLLVSPCYYA
SIO_010081: PSME4
subclass of: SO_0000673
so part of: PSME4
location: complement(join(107976600..107976734,108033207..108033340,108078404..108078566,108178276..108178431,108241011..108241139,108298717..108298802,108385479..108385687,108486806..108486937,108526209..108526300,108607454..108607558,108716818..108716970,108746556..108746681,108756129..108756198,108800198..108800351,108937399..108937480,109020460..109020589,109059687..109059740,109150730..109150866,109215387..109215596,109345652..109345777,109345906..109346001,109346106..109346168,109346275..109346373,109409667..109409722,109524017..109524073,109537895..109537950,109634334..109634429,109705027..109705184,109813454..109813669,109840264..109840331,109862534..109862603,109919742..109919840,109948025..109948175,110047064..110047128,110095043..110095132,110121531..110121717,110132080..110132345,110212959..110213051,110259926..110260048,110344760..110344834,110378548..110378611,110453134..110453283,110520501..110520545,110692466..110692582,110722586..110722726,110940831..110941033))
location: region:107976600-110941033:-1
so has part: feature:110940831-110941033:-1:exon
so has part: feature:110722586-110722726:-1:exon
so has part: feature:110692466-110692582:-1:exon
so has part: feature:110520501-110520545:-1:exon
so has part: feature:110453134-110453283:-1:exon
so has part: feature:110378548-110378611:-1:exon
so has part: feature:110344760-110344834:-1:exon
so has part: feature:110259926-110260048:-1:exon
so has part: feature:110212959-110213051:-1:exon
so has part: feature:110132080-110132345:-1:exon
so has part: feature:110121531-110121717:-1:exon
so has part: feature:110095043-110095132:-1:exon
so has part: feature:110047064-110047128:-1:exon
so has part: feature:109948025-109948175:-1:exon
so has part: feature:109919742-109919840:-1:exon
so has part: feature:109862534-109862603:-1:exon
so has part: feature:109840264-109840331:-1:exon
so has part: feature:109813454-109813669:-1:exon
so has part: feature:109705027-109705184:-1:exon
so has part: feature:109634334-109634429:-1:exon
so has part: feature:109537895-109537950:-1:exon
so has part: feature:109524017-109524073:-1:exon
so has part: feature:109409667-109409722:-1:exon
so has part: feature:109346275-109346373:-1:exon
so has part: feature:109346106-109346168:-1:exon
so has part: feature:109345906-109346001:-1:exon
so has part: feature:109345652-109345777:-1:exon
so has part: feature:109215387-109215596:-1:exon
so has part: feature:109150730-109150866:-1:exon
so has part: feature:109059687-109059740:-1:exon
so has part: feature:109020460-109020589:-1:exon
so has part: feature:108937399-108937480:-1:exon
so has part: feature:108800198-108800351:-1:exon
so has part: feature:108756129-108756198:-1:exon
so has part: feature:108746556-108746681:-1:exon
so has part: feature:108716818-108716970:-1:exon
so has part: feature:108607454-108607558:-1:exon
so has part: feature:108526209-108526300:-1:exon
so has part: feature:108486806-108486937:-1:exon
so has part: feature:108385479-108385687:-1:exon
so has part: feature:108298717-108298802:-1:exon
so has part: feature:108241011-108241139:-1:exon
so has part: feature:108178276-108178431:-1:exon
so has part: feature:108078404-108078566:-1:exon
so has part: feature:108033207-108033340:-1:exon
so has part: feature:107976600-107976734:-1:exon

XP_043911057.1
type: Protein
SIO_000068: ncbiprotein

position:107976600:-1
position: 107976600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110941033:-1
position: 110941033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110940831-110941033:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:110722586-110722726:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:110692466-110692582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:110520501-110520545:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:110453134-110453283:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110378548-110378611:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110344760-110344834:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:110259926-110260048:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:110212959-110213051:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:110132080-110132345:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110121531-110121717:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110095043-110095132:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:110047064-110047128:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:109948025-109948175:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:109919742-109919840:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:109862534-109862603:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:109840264-109840331:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:109813454-109813669:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:109705027-109705184:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:109634334-109634429:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:109537895-109537950:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:109524017-109524073:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:109409667-109409722:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:109346275-109346373:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:109346106-109346168:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:109345906-109346001:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:109345652-109345777:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:109215387-109215596:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:109150730-109150866:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:109059687-109059740:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:109020460-109020589:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:108937399-108937480:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:108800198-108800351:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:108756129-108756198:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:108746556-108746681:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:108716818-108716970:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:108607454-108607558:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:108526209-108526300:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:108486806-108486937:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:108385479-108385687:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:108298717-108298802:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:108241011-108241139:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:108178276-108178431:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:108078404-108078566:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:108033207-108033340:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:107976600-107976734:-1:exon

ACYP2
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: ACYP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 111064036..111378146
location: region:111064036-111378146:1
so has part: feature:111064036-111378146:1:exon
subclass of: SO_0000010

122792455
type: Gene
SIO_000068: ncbigene

position:111064036:1
position: 111064036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111378146:1
position: 111378146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111064036-111378146:1:exon

ACYP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: ACYP2
product: acylphosphatase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_044060241.1
SIO_010081: ACYP2
subclass of: SO_0000673
so part of: ACYP2
location: join(111064036..111064259,111153987..111154003,111378033..111378146)
location: region:111064036-111378146:1
so has part: feature:111064036-111064259:1:exon
so has part: feature:111153987-111154003:1:exon
so has part: feature:111378033-111378146:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111064036-111064259:1:exon

position:111064259:1
position: 111064259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:111153987-111154003:1:exon

position:111153987:1
position: 111153987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111154003:1
position: 111154003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:111378033-111378146:1:exon

position:111378033:1
position: 111378033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACYP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: ACYP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acylphosphatase-2
translation: MHGVFNILIVIYLSFLIMSAETKLSNRLKSVDYEISGRVQGVCFRMYTEDEARKLGVVGWVKNSRQGTVVGQVQGPEDKVVAM
SIO_010081: ACYP2
subclass of: SO_0000673
so part of: ACYP2
location: join(111064139..111064259,111153987..111154003,111378033..111378146)
location: region:111064139-111378146:1
so has part: feature:111064139-111064259:1:exon
so has part: feature:111153987-111154003:1:exon
so has part: feature:111378033-111378146:1:exon

XP_043916176.1
type: Protein
SIO_000068: ncbiprotein

position:111064139:1
position: 111064139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111064139-111064259:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111153987-111154003:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111378033-111378146:1:exon

CCHR1.PART2H2orf73
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: CCHR1.PART2H2orf73
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 113293695..113804157
location: region:113293695-113804157:1
so has part: feature:113293695-113804157:1:exon
subclass of: SO_0000010

122788160
type: Gene
SIO_000068: ncbigene

position:113293695:1
position: 113293695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113804157:1
position: 113804157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113293695-113804157:1:exon

CCHR1.PART2H2orf73
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: CCHR1.PART2H2orf73
product: chromosome chr1.part2 C2orf73 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_044055137.1
SIO_010081: CCHR1.PART2H2orf73
subclass of: SO_0000673
so part of: CCHR1.PART2H2orf73
location: join(113293695..113293919,113495021..113495252,113511431..113511590,113724303..113724418,113802782..113804157)
location: region:113293695-113804157:1
so has part: feature:113293695-113293919:1:exon
so has part: feature:113495021-113495252:1:exon
so has part: feature:113511431-113511590:1:exon
so has part: feature:113724303-113724418:1:exon
so has part: feature:113802782-113804157:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113293695-113293919:1:exon

position:113293919:1
position: 113293919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113495021-113495252:1:exon

position:113495021:1
position: 113495021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113495252:1
position: 113495252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:113511431-113511590:1:exon

position:113511431:1
position: 113511431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113511590:1
position: 113511590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:113724303-113724418:1:exon

position:113724303:1
position: 113724303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113724418:1
position: 113724418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:113802782-113804157:1:exon

position:113802782:1
position: 113802782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCHR1.PART2H2orf73
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: CCHR1.PART2H2orf73
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C2orf73 homolog
translation: MYQTLEIYMSRKKRVQGQFYPNTYRIFDERIPNESMGEEKYNLSYVHRKPDPLPQHPRSPTRHNIPHPYYARFINTNPHTLNEPVIHMETKVTIDQQHHWWPSGTSHTEQHKPKYSKQSTQRMDYQNLENWPLPKRRYNMNPNRSPASGIVPLADSRTPHSAPKILLEKVSYHHQYNSRASPNEPIRGKRHGAFVWSEINPKSGTMAPKGAEAFLSTAGSYSLKQPTAERGNSVKGKMTSPKLLLQNSQQMLHSEPHLSKTDFKETAKAYPRNSAGGQHNSSICPEIEMPQITSSGVGSHADTPPVLLDKHSATYLTNNIPLPTTMHLQPVTTTKAIDISLECNNYTMQKMTPVDS
SIO_010081: CCHR1.PART2H2orf73
subclass of: SO_0000673
so part of: CCHR1.PART2H2orf73
location: join(113293861..113293919,113495021..113495252,113511431..113511590,113724303..113724418,113802782..113803285)
location: region:113293861-113803285:1
so has part: feature:113293861-113293919:1:exon
so has part: feature:113495021-113495252:1:exon
so has part: feature:113511431-113511590:1:exon
so has part: feature:113724303-113724418:1:exon
so has part: feature:113802782-113803285:1:exon

XP_043911072.1
type: Protein
SIO_000068: ncbiprotein

position:113293861:1
position: 113293861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113803285:1
position: 113803285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113293861-113293919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113495021-113495252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113511431-113511590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113724303-113724418:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113802782-113803285:1:exon

SPTBN1
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: SPTBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 115192860..117569997
location: region:115192860-117569997:1
so has part: feature:115192860-117569997:1:exon
subclass of: SO_0000010

122788166
type: Gene
SIO_000068: ncbigene

position:115192860:1
position: 115192860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117569997:1
position: 117569997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115192860-117569997:1:exon

SPTBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: SPTBN1
product: spectrin beta, non-erythrocytic 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055150.1
SIO_010081: SPTBN1
subclass of: SO_0000673
so part of: SPTBN1
location: join(115192860..115193141,115624760..115624953,116080274..116080425,116219250..116219423,116263369..116263460,116271524..116271604,116272494..116272609,116285173..116285285,116285495..116285682,116375709..116375826,116376766..116376924,116380539..116380841,116432700..116432853,116442529..116443399,116488959..116489096,116574499..116575255,116710952..116711154,116712053..116712143,116718365..116718511,116762907..116763170,116771983..116772207,116772962..116773051,116845025..116845303,116915149..116915279,117017433..117017637,117025505..117025879,117038687..117038931,117043990..117044128,117123585..117123669,117203469..117203665,117255088..117255197,117384296..117384362,117439452..117439690,117463940..117464113,117500233..117500275,117568678..117569997)
location: region:115192860-117569997:1
so has part: feature:115192860-115193141:1:exon
so has part: feature:115624760-115624953:1:exon
so has part: feature:116080274-116080425:1:exon
so has part: feature:116219250-116219423:1:exon
so has part: feature:116263369-116263460:1:exon
so has part: feature:116271524-116271604:1:exon
so has part: feature:116272494-116272609:1:exon
so has part: feature:116285173-116285285:1:exon
so has part: feature:116285495-116285682:1:exon
so has part: feature:116375709-116375826:1:exon
so has part: feature:116376766-116376924:1:exon
so has part: feature:116380539-116380841:1:exon
so has part: feature:116432700-116432853:1:exon
so has part: feature:116442529-116443399:1:exon
so has part: feature:116488959-116489096:1:exon
so has part: feature:116574499-116575255:1:exon
so has part: feature:116710952-116711154:1:exon
so has part: feature:116712053-116712143:1:exon
so has part: feature:116718365-116718511:1:exon
so has part: feature:116762907-116763170:1:exon
so has part: feature:116771983-116772207:1:exon
so has part: feature:116772962-116773051:1:exon
so has part: feature:116845025-116845303:1:exon
so has part: feature:116915149-116915279:1:exon
so has part: feature:117017433-117017637:1:exon
so has part: feature:117025505-117025879:1:exon
so has part: feature:117038687-117038931:1:exon
so has part: feature:117043990-117044128:1:exon
so has part: feature:117123585-117123669:1:exon
so has part: feature:117203469-117203665:1:exon
so has part: feature:117255088-117255197:1:exon
so has part: feature:117384296-117384362:1:exon
so has part: feature:117439452-117439690:1:exon
so has part: feature:117463940-117464113:1:exon
so has part: feature:117500233-117500275:1:exon
so has part: feature:117568678-117569997:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115192860-115193141:1:exon

position:115193141:1
position: 115193141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:115624760-115624953:1:exon

position:115624760:1
position: 115624760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115624953:1
position: 115624953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:116080274-116080425:1:exon

position:116080274:1
position: 116080274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116080425:1
position: 116080425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:116219250-116219423:1:exon

position:116219250:1
position: 116219250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116219423:1
position: 116219423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:116263369-116263460:1:exon

position:116263369:1
position: 116263369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116263460:1
position: 116263460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:116271524-116271604:1:exon

position:116271524:1
position: 116271524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116271604:1
position: 116271604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:116272494-116272609:1:exon

position:116272494:1
position: 116272494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116272609:1
position: 116272609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:116285173-116285285:1:exon

position:116285173:1
position: 116285173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116285285:1
position: 116285285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:116285495-116285682:1:exon

position:116285495:1
position: 116285495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116285682:1
position: 116285682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:116375709-116375826:1:exon

position:116375709:1
position: 116375709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116375826:1
position: 116375826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:116376766-116376924:1:exon

position:116376766:1
position: 116376766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116376924:1
position: 116376924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:116380539-116380841:1:exon

position:116380539:1
position: 116380539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116380841:1
position: 116380841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:116432700-116432853:1:exon

position:116432700:1
position: 116432700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116432853:1
position: 116432853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:116442529-116443399:1:exon

position:116442529:1
position: 116442529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116443399:1
position: 116443399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:116488959-116489096:1:exon

position:116488959:1
position: 116488959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116489096:1
position: 116489096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:116574499-116575255:1:exon

position:116574499:1
position: 116574499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116575255:1
position: 116575255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:116710952-116711154:1:exon

position:116710952:1
position: 116710952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116711154:1
position: 116711154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:116712053-116712143:1:exon

position:116712053:1
position: 116712053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116712143:1
position: 116712143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:116718365-116718511:1:exon

position:116718365:1
position: 116718365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116718511:1
position: 116718511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:116762907-116763170:1:exon

position:116762907:1
position: 116762907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116763170:1
position: 116763170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:116771983-116772207:1:exon

position:116771983:1
position: 116771983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116772207:1
position: 116772207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:116772962-116773051:1:exon

position:116772962:1
position: 116772962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116773051:1
position: 116773051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:116845025-116845303:1:exon

position:116845025:1
position: 116845025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116845303:1
position: 116845303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:116915149-116915279:1:exon

position:116915149:1
position: 116915149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116915279:1
position: 116915279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:117017433-117017637:1:exon

position:117017433:1
position: 117017433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117017637:1
position: 117017637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:117025505-117025879:1:exon

position:117025505:1
position: 117025505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117025879:1
position: 117025879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:117038687-117038931:1:exon

position:117038687:1
position: 117038687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117038931:1
position: 117038931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:117043990-117044128:1:exon

position:117043990:1
position: 117043990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117044128:1
position: 117044128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:117123585-117123669:1:exon

position:117123585:1
position: 117123585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117123669:1
position: 117123669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:117203469-117203665:1:exon

position:117203469:1
position: 117203469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117203665:1
position: 117203665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:117255088-117255197:1:exon

position:117255088:1
position: 117255088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117255197:1
position: 117255197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:117384296-117384362:1:exon

position:117384296:1
position: 117384296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117384362:1
position: 117384362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:117439452-117439690:1:exon

position:117439452:1
position: 117439452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117439690:1
position: 117439690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:117463940-117464113:1:exon

position:117463940:1
position: 117463940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117464113:1
position: 117464113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:117500233-117500275:1:exon

position:117500233:1
position: 117500233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117500275:1
position: 117500275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:117568678-117569997:1:exon

position:117568678:1
position: 117568678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPTBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: SPTBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spectrin beta chain, non-erythrocytic 1
translation: MTAVAADFDNIEIQHQYTDVNNRWEADDWDNENSSARLFERSRIKALADEREAVQKKTFTKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALAVEGKRIGKVLENAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLIGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAVVAVAKELDAENYHDIKRITARKDNVIRLWEYLLELLKARRHRLEMNLSLQKIFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLVQKHALVEADIAIQAERVRAVNASAQKFASDDDGYKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLDESRRLWKFFWEMAEEGGWIKEKEQIISSEDYGKDLTSVVRLLTKHKAFEDEMSGRSGHLHQTIKEGEAMIADEHFGTDKIRERLTDIQEQWANLEQLSAIRKKHLEEALNLYQFQADADDTDAWMLDILRIVSSSDVGHDEYSTQSLVKKHKDVAEEIANYRSTIDSLIEQSKALPVEFAQSQDVQDRLSGIEERYKEVAELARLRKQALQDALALYKMSSETDACELWIYEKEQWLNNMHIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIARQLLHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALTSALSIQNYHLECNETKSWIREKTKVIESTQELGNDLAGVMALQRKLTGMERDLAAIEAKLDDLQKESEKLAEEHPDQAQAVQGRLTEIDDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNTLAEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQSLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTLEAAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNIYSDKIQEKADSIDDRHKKNREAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQGFMAELASNKEWLDKIEKDGAVLITEKPETEQVVKEKLTTLHRMWQNLESTTQTKAQCLFDANKAELFTQSCADLDKWLNGLETQIQSDDYGKDLTSVNILLKKQQMLENQIEVRKKEVEELQSQAQALRQEGKDTDEVDGQRVIVEQRLVQLMGPLNERKKYLFASREIHQFNRDVEDEILWGDERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRTDDILERSQHITVDGSPQTEAIKQRVADQQTLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSAVTMLKKHQILEQAVEDYAETVHQLSKTSRALVAEGHPESERISMRQSQVDKLYAGLKDLAEERKGKLDERYRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDAVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKTLLDACEGRRVQLLDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEKRKEM…
SIO_010081: SPTBN1
subclass of: SO_0000673
so part of: SPTBN1
location: join(115624809..115624953,116080274..116080425,116219250..116219423,116263369..116263460,116271524..116271604,116272494..116272609,116285173..116285285,116285495..116285682,116375709..116375826,116376766..116376924,116380539..116380841,116432700..116432853,116442529..116443399,116488959..116489096,116574499..116575255,116710952..116711154,116712053..116712143,116718365..116718511,116762907..116763170,116771983..116772207,116772962..116773051,116845025..116845303,116915149..116915279,117017433..117017637,117025505..117025879,117038687..117038931,117043990..117044128,117123585..117123669,117203469..117203665,117255088..117255197,117384296..117384362,117439452..117439690,117463940..117464113,117500233..117500275,117568678..117568890)
location: region:115624809-117568890:1
so has part: feature:115624809-115624953:1:exon
so has part: feature:116080274-116080425:1:exon
so has part: feature:116219250-116219423:1:exon
so has part: feature:116263369-116263460:1:exon
so has part: feature:116271524-116271604:1:exon
so has part: feature:116272494-116272609:1:exon
so has part: feature:116285173-116285285:1:exon
so has part: feature:116285495-116285682:1:exon
so has part: feature:116375709-116375826:1:exon
so has part: feature:116376766-116376924:1:exon
so has part: feature:116380539-116380841:1:exon
so has part: feature:116432700-116432853:1:exon
so has part: feature:116442529-116443399:1:exon
so has part: feature:116488959-116489096:1:exon
so has part: feature:116574499-116575255:1:exon
so has part: feature:116710952-116711154:1:exon
so has part: feature:116712053-116712143:1:exon
so has part: feature:116718365-116718511:1:exon
so has part: feature:116762907-116763170:1:exon
so has part: feature:116771983-116772207:1:exon
so has part: feature:116772962-116773051:1:exon
so has part: feature:116845025-116845303:1:exon
so has part: feature:116915149-116915279:1:exon
so has part: feature:117017433-117017637:1:exon
so has part: feature:117025505-117025879:1:exon
so has part: feature:117038687-117038931:1:exon
so has part: feature:117043990-117044128:1:exon
so has part: feature:117123585-117123669:1:exon
so has part: feature:117203469-117203665:1:exon
so has part: feature:117255088-117255197:1:exon
so has part: feature:117384296-117384362:1:exon
so has part: feature:117439452-117439690:1:exon
so has part: feature:117463940-117464113:1:exon
so has part: feature:117500233-117500275:1:exon
so has part: feature:117568678-117568890:1:exon

XP_043911085.1
type: Protein
SIO_000068: ncbiprotein

position:115624809:1
position: 115624809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117568890:1
position: 117568890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115624809-115624953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:116080274-116080425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:116219250-116219423:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:116263369-116263460:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:116271524-116271604:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:116272494-116272609:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116285173-116285285:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:116285495-116285682:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:116375709-116375826:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:116376766-116376924:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116380539-116380841:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:116432700-116432853:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:116442529-116443399:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:116488959-116489096:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:116574499-116575255:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:116710952-116711154:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:116712053-116712143:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:116718365-116718511:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:116762907-116763170:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:116771983-116772207:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:116772962-116773051:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:116845025-116845303:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:116915149-116915279:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:117017433-117017637:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:117025505-117025879:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:117038687-117038931:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:117043990-117044128:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:117123585-117123669:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:117203469-117203665:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:117255088-117255197:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:117384296-117384362:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:117439452-117439690:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:117463940-117464113:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:117500233-117500275:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:117568678-117568890:1:exon

RTN4
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: RTN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 119686420..119937122
location: region:119686420-119937122:1
so has part: feature:119686420-119937122:1:exon
subclass of: SO_0000010

122788173
type: Gene
SIO_000068: ncbigene

position:119686420:1
position: 119686420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119937122:1
position: 119937122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119686420-119937122:1:exon

RTN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: RTN4
product: reticulon 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_044055159.1
SIO_010081: RTN4
subclass of: SO_0000673
so part of: RTN4
location: join(119686420..119686624,119758461..119758668,119778900..119779038,119899537..119899606,119900045..119900091,119937060..119937122)
location: region:119686420-119937122:1
so has part: feature:119686420-119686624:1:exon
so has part: feature:119758461-119758668:1:exon
so has part: feature:119778900-119779038:1:exon
so has part: feature:119899537-119899606:1:exon
so has part: feature:119900045-119900091:1:exon
so has part: feature:119937060-119937122:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119686420-119686624:1:exon

position:119686624:1
position: 119686624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119758461-119758668:1:exon

position:119758461:1
position: 119758461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119758668:1
position: 119758668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:119778900-119779038:1:exon

position:119778900:1
position: 119778900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119779038:1
position: 119779038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:119899537-119899606:1:exon

position:119899537:1
position: 119899537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119899606:1
position: 119899606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:119900045-119900091:1:exon

position:119900045:1
position: 119900045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119900091:1
position: 119900091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:119937060-119937122:1:exon

position:119937060:1
position: 119937060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RTN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: RTN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulon-4
translation: MECQKTNWKDKVVDLLYWRDIKKTGLVFGASLLLLLSLTIFSIVTVTSYIALALLSMTISFRIYKGVLQAIQKSDDGHPFKAWLEPDITLSQDLVHSYSNTVLNYVNCTVKELRRLFLVDDLVDSLKFAVVMWLLTYVGALFNGLTLLILALVYLFSVPVIYERHQAQIDHYYKLVSTQIKDAFSK
SIO_010081: RTN4
subclass of: SO_0000673
so part of: RTN4
location: join(119686591..119686624,119758461..119758668,119778900..119779038,119899537..119899606,119900045..119900091,119937060..119937122)
location: region:119686591-119937122:1
so has part: feature:119686591-119686624:1:exon
so has part: feature:119758461-119758668:1:exon
so has part: feature:119778900-119779038:1:exon
so has part: feature:119899537-119899606:1:exon
so has part: feature:119900045-119900091:1:exon
so has part: feature:119937060-119937122:1:exon

XP_043911094.1
type: Protein
SIO_000068: ncbiprotein

position:119686591:1
position: 119686591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119686591-119686624:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119758461-119758668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119778900-119779038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119899537-119899606:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119900045-119900091:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119937060-119937122:1:exon

LOC122792336
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122792336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(120201978..120425243)
location: region:120201978-120425243:-1
so has part: feature:120201978-120425243:-1:exon
subclass of: SO_0000010

122792336
type: Gene
SIO_000068: ncbigene

position:120201978:-1
position: 120201978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120425243:-1
position: 120425243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120201978-120425243:-1:exon

LOC122792336
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: LOC122792336
product: reticulon-4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_044060134.1
SIO_010081: LOC122792336
subclass of: SO_0000673
so part of: LOC122792336
location: complement(join(120201978..120202010,120203334..120203341,120224709..120227285,120228122..120228163,120424648..120425243))
location: region:120201978-120425243:-1
so has part: feature:120424648-120425243:-1:exon
so has part: feature:120228122-120228163:-1:exon
so has part: feature:120224709-120227285:-1:exon
so has part: feature:120203334-120203341:-1:exon
so has part: feature:120201978-120202010:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:120424648-120425243:-1:exon

position:120424648:-1
position: 120424648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:120228122-120228163:-1:exon

position:120228122:-1
position: 120228122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120228163:-1
position: 120228163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:120224709-120227285:-1:exon

position:120224709:-1
position: 120224709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120227285:-1
position: 120227285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:120203334-120203341:-1:exon

position:120203334:-1
position: 120203334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120203341:-1
position: 120203341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:120201978-120202010:-1:exon

position:120202010:-1
position: 120202010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122792336
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: LOC122792336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulon-4-like
translation: MEDAVHSPQVSSSSSSDFERLSSGDGSREDLTVPDYTAREEEDGRVDAKEMQPVTAQVVDSPSDAQRQPVSTAWEPMKLDVTPPKAEEEVPHSPISDIRSQEDKTQSKPTTKQVPSDDVQVTSLTAESTCCDESFSPHASPLYSAEGLVDFKKQPSNTEFIVGEEGFVSTVAKSSAPRSSLSPLSESLGGQISAAFSADTNQKPITALEEELLQSSGGNMEFIESLKSDQSEGNDEQEDTRQTVLVSSETAITEQVSDDKGMGKSSDNIYDTEHELKQDSFHALQTMSAVHAPVHEELPDQVISSTPAFDSEEQEYLGYDQDNVLEKCELSDDQTKLHDTDVIDSSDLVQSTENAENETLESEVNVQMESDAGKPALVLESLSVQHPTSVKLEERDLEVHENLREPSRGYATFAAFEPSSAYFGDDLSPVVEETLVAKPKDSVLDQVHTMPYEIISSEPEPFVSIGQAAITPDSLSKSSADSSTNASEIPTPDLVQGAHEGDLHDVIYLKNSDESTVDLVQTLPEPPKDTPSPITMSPSPEGSDSVQSPILPDIIMESPSNMNTYRVETTVSASPEPRDHLLETDIQQEVPCVQESSEFVTTEKSNDSSLEVLAASVGITPVDIASIQEPMYAQNTTEEMETPYMSVSCDLIKETTSKEKVPLEVVGSVEPFPLEAFPEYTASFEQAIKSPTTYPEVPLVQDASDLMQSKDVHPNLALHLVEGHEEASTPSPDRISREMVEGFSPSEVGLEYSHSSVEILKGTAPLIVEEPIVKSFEMESLKAELAEALEEPVTAVHESRLEQPITFAHTRDLEEPISVGDGGLEEPVRVANFREYSRVCVEPYVSENIPLDHETFITGPVKDGFDTLISATVKSAAEAKEHEIIPPGDPKVVFDSFESEKTEWSHAALADTTYFPPLDIHEVKRSTELIEIPTLPGTLEKQALEDLEKPLLLEDAAVAEETSFVDRDNTSESNAALELPSSSSTQETHKDTASVLTKLNKTEGIDLLYCKWMAGCA
SIO_010081: LOC122792336
subclass of: SO_0000673
so part of: LOC122792336
location: complement(join(120201978..120202010,120203334..120203341,120224709..120227285,120228122..120228163,120424648..120425041))
location: region:120201978-120425041:-1
so has part: feature:120424648-120425041:-1:exon
so has part: feature:120228122-120228163:-1:exon
so has part: feature:120224709-120227285:-1:exon
so has part: feature:120203334-120203341:-1:exon
so has part: feature:120201978-120202010:-1:exon

XP_043916069.1
type: Protein
SIO_000068: ncbiprotein

position:120425041:-1
position: 120425041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120424648-120425041:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:120228122-120228163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:120224709-120227285:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:120203334-120203341:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120201978-120202010:-1:exon

MTIF2
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: MTIF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 121717926..122728196
location: region:121717926-122728196:1
so has part: feature:121717926-122728196:1:exon
subclass of: SO_0000010

122788181
type: Gene
SIO_000068: ncbigene

position:121717926:1
position: 121717926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122728196:1
position: 122728196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121717926-122728196:1:exon

MTIF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: MTIF2
product: mitochondrial translational initiation factor 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
inference: similar to RNA sequence (same species):INSD:GGXP01053429.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 121 bases not found in genome assembly
transcript id: XM_044055171.1
SIO_010081: MTIF2
subclass of: SO_0000673
so part of: MTIF2
location: join(121717926..121718137,121770595..>121770801,<121814335..121814506,121912578..121912738,121912845..121913021,122086693..122086832,122170553..122170677,122178704..122178908,122336503..122336755,122423426..122423566,122488419..122488583,122551634..122551774,122727570..122728196)
location: region:121717926-122728196:1
so has part: feature:121717926-121718137:1:exon
so has part: feature:121770595-121770801:1:exon
so has part: feature:121814335-121814506:1:exon
so has part: feature:121912578-121912738:1:exon
so has part: feature:121912845-121913021:1:exon
so has part: feature:122086693-122086832:1:exon
so has part: feature:122170553-122170677:1:exon
so has part: feature:122178704-122178908:1:exon
so has part: feature:122336503-122336755:1:exon
so has part: feature:122423426-122423566:1:exon
so has part: feature:122488419-122488583:1:exon
so has part: feature:122551634-122551774:1:exon
so has part: feature:122727570-122728196:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121717926-121718137:1:exon

position:121718137:1
position: 121718137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:121770595-121770801:1:exon

position:121770595:1
position: 121770595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121770801:1
position: 121770801
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 3
SIO_000628: feature:121814335-121814506:1:exon

position:121814335:1
position: 121814335
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:121814506:1
position: 121814506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:121912578-121912738:1:exon

position:121912578:1
position: 121912578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121912738:1
position: 121912738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:121912845-121913021:1:exon

position:121912845:1
position: 121912845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121913021:1
position: 121913021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:122086693-122086832:1:exon

position:122086693:1
position: 122086693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122086832:1
position: 122086832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:122170553-122170677:1:exon

position:122170553:1
position: 122170553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122170677:1
position: 122170677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:122178704-122178908:1:exon

position:122178704:1
position: 122178704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122178908:1
position: 122178908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:122336503-122336755:1:exon

position:122336503:1
position: 122336503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122336755:1
position: 122336755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:122423426-122423566:1:exon

position:122423426:1
position: 122423426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122423566:1
position: 122423566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:122488419-122488583:1:exon

position:122488419:1
position: 122488419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122488583:1
position: 122488583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:122551634-122551774:1:exon

position:122551634:1
position: 122551634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122551774:1
position: 122551774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:122727570-122728196:1:exon

position:122727570:1
position: 122727570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MTIF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: MTIF2
inference: similar to RNA sequence (same species):INSD:GGXP01053429.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 121 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2, mitochondrial
translation: MNRRLILKVEHLVRYQSCCRHLHKTCRVVGLQLQAVKAVRVFSHCIMWQRNSWRQISVTQATFFAAKEKKWDGKGQKSPGKPKEEKPEVEIRHRMTIADLAKAMNKDIDHVYEALLHTDLDIDLLEPHSVLDEMWVKEVIKKSGMKYRWAKLSEEKVRENKDATRRTHIDAASQVPRPPVVTIMGHVDHGKTTLLDSLRKTQMAAMEAGGITQHIGAFLVQLQSGERITFLDTPGHAAFSAMRARGACITDIVILVVAADDGVMKQTVESIQHAKKAKVPIIVAINKCDKPDADPERVKKELLGHDVVCEDYGGDVQSVNISALKGTNLLAVAEATVALAEMLELKADPTGPVEGTVVESRTDKGKGPVTTAIVHHGTLKKGCVLVAGKCWAKVRLLFDENGKIMDAAGPSLPVEIVGWKDLPSAGDEILEVESEQRAREIVEWRNYAEEQRKMEKDLEVIEAKQREHKDAYNKVRESMGSLTWRQRKAALYKSNKKLGVMRPKEKTESDRLILPIIIKGDVDGSVEAILSVLDSYDADDECELDVIHFGVGDISENDINLAETFSGVIYGFNVNVSKGIQQMATKKNIPVKIHHVIYRLIDELKEELSSKLPPTMEDSTIGEASVLAVFEVTVGKKKIPVAGCRVQKGQLDKKLKFRLVRNGNIIWNGSVIALKHHKDDVQTVKAGMECGLSIDKDISIESGDEIVCYEEKELPQTISWDPGF
SIO_010081: MTIF2
subclass of: SO_0000673
so part of: MTIF2
location: join(121770598..>121770801,<121814335..121814506,121912578..121912738,121912845..121913021,122086693..122086832,122170553..122170677,122178704..122178908,122336503..122336755,122423426..122423566,122488419..122488583,122551634..122551774,122727570..122727739)
location: region:121770598-122727739:1
so has part: feature:121770598-121770801:1:exon
so has part: feature:121814335-121814506:1:exon
so has part: feature:121912578-121912738:1:exon
so has part: feature:121912845-121913021:1:exon
so has part: feature:122086693-122086832:1:exon
so has part: feature:122170553-122170677:1:exon
so has part: feature:122178704-122178908:1:exon
so has part: feature:122336503-122336755:1:exon
so has part: feature:122423426-122423566:1:exon
so has part: feature:122488419-122488583:1:exon
so has part: feature:122551634-122551774:1:exon
so has part: feature:122727570-122727739:1:exon

XP_043911106.1
type: Protein
SIO_000068: ncbiprotein

position:121770598:1
position: 121770598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122727739:1
position: 122727739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121770598-121770801:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121814335-121814506:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121912578-121912738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:121912845-121913021:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122086693-122086832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122170553-122170677:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:122178704-122178908:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:122336503-122336755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:122423426-122423566:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:122488419-122488583:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:122551634-122551774:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:122727570-122727739:1:exon

RPS27A
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: RPS27A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(122988055..123037280)
location: region:122988055-123037280:-1
so has part: feature:122988055-123037280:-1:exon
subclass of: SO_0000010

122788195
type: Gene
SIO_000068: ncbigene

position:122988055:-1
position: 122988055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123037280:-1
position: 123037280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122988055-123037280:-1:exon

RPS27A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: RPS27A
product: ribosomal protein S27a
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055199.1
SIO_010081: RPS27A
subclass of: SO_0000673
so part of: RPS27A
location: complement(join(122988055..122988239,122994751..122994882,122995825..122995910,123008991..123009045,123037048..123037112,123037211..123037280))
location: region:122988055-123037280:-1
so has part: feature:123037211-123037280:-1:exon
so has part: feature:123037048-123037112:-1:exon
so has part: feature:123008991-123009045:-1:exon
so has part: feature:122995825-122995910:-1:exon
so has part: feature:122994751-122994882:-1:exon
so has part: feature:122988055-122988239:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123037211-123037280:-1:exon

position:123037211:-1
position: 123037211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:123037048-123037112:-1:exon

position:123037048:-1
position: 123037048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123037112:-1
position: 123037112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:123008991-123009045:-1:exon

position:123008991:-1
position: 123008991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123009045:-1
position: 123009045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:122995825-122995910:-1:exon

position:122995825:-1
position: 122995825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122995910:-1
position: 122995910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:122994751-122994882:-1:exon

position:122994751:-1
position: 122994751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122994882:-1
position: 122994882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:122988055-122988239:-1:exon

position:122988239:-1
position: 122988239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPS27A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: RPS27A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-40S ribosomal protein S27a
translation: MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLTVLKYYKVDENGKIHRLRRECPSEECGAGVFMASHFDRHYCGKCCLTYCFNKPKINEKCK
SIO_010081: RPS27A
subclass of: SO_0000673
so part of: RPS27A
location: complement(join(122988078..122988239,122994751..122994882,122995825..122995910,123008991..123009045,123037048..123037095))
location: region:122988078-123037095:-1
so has part: feature:123037048-123037095:-1:exon
so has part: feature:123008991-123009045:-1:exon
so has part: feature:122995825-122995910:-1:exon
so has part: feature:122994751-122994882:-1:exon
so has part: feature:122988078-122988239:-1:exon

XP_043911134.1
type: Protein
SIO_000068: ncbiprotein

position:122988078:-1
position: 122988078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123037095:-1
position: 123037095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123037048-123037095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123008991-123009045:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:122995825-122995910:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122994751-122994882:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122988078-122988239:-1:exon

CLHC1
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: CLHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 123037387..125009714
location: region:123037387-125009714:1
so has part: feature:123037387-125009714:1:exon
subclass of: SO_0000010

122788189
type: Gene
SIO_000068: ncbigene

position:123037387:1
position: 123037387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125009714:1
position: 125009714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123037387-125009714:1:exon

CLHC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: CLHC1
product: clathrin heavy chain linker domain containing 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055182.1
SIO_010081: CLHC1
subclass of: SO_0000673
so part of: CLHC1
location: join(123037387..123037687,123272056..123272285,123338652..123338839,123459415..123459551,123738404..123738605,123994510..123994625,124071561..124071660,124237780..124237886,124448708..124448882,124682935..124683137,124845764..124845943,125009226..125009714)
location: region:123037387-125009714:1
so has part: feature:123037387-123037687:1:exon
so has part: feature:123272056-123272285:1:exon
so has part: feature:123338652-123338839:1:exon
so has part: feature:123459415-123459551:1:exon
so has part: feature:123738404-123738605:1:exon
so has part: feature:123994510-123994625:1:exon
so has part: feature:124071561-124071660:1:exon
so has part: feature:124237780-124237886:1:exon
so has part: feature:124448708-124448882:1:exon
so has part: feature:124682935-124683137:1:exon
so has part: feature:124845764-124845943:1:exon
so has part: feature:125009226-125009714:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123037387-123037687:1:exon

position:123037687:1
position: 123037687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:123272056-123272285:1:exon

position:123272056:1
position: 123272056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123272285:1
position: 123272285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:123338652-123338839:1:exon

position:123338652:1
position: 123338652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123338839:1
position: 123338839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:123459415-123459551:1:exon

position:123459415:1
position: 123459415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123459551:1
position: 123459551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:123738404-123738605:1:exon

position:123738404:1
position: 123738404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123738605:1
position: 123738605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:123994510-123994625:1:exon

position:123994510:1
position: 123994510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123994625:1
position: 123994625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:124071561-124071660:1:exon

position:124071561:1
position: 124071561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124071660:1
position: 124071660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:124237780-124237886:1:exon

position:124237780:1
position: 124237780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124237886:1
position: 124237886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:124448708-124448882:1:exon

position:124448708:1
position: 124448708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124448882:1
position: 124448882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:124682935-124683137:1:exon

position:124682935:1
position: 124682935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124683137:1
position: 124683137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:124845764-124845943:1:exon

position:124845764:1
position: 124845764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124845943:1
position: 124845943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:125009226-125009714:1:exon

position:125009226:1
position: 125009226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CLHC1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7888
gene: CLHC1
product: clathrin heavy chain linker domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_006362617.1
SIO_010081: CLHC1
so part of: CLHC1
location: join(123037387..123037687,123272056..123272285,123338652..123338839,123459415..123459551,123738404..123738605,123994510..123994625,124071561..124071660,124237780..124237886,124448708..124448882,124682935..124683137,124845764..124845943,125007856..125007962,125009226..125009311)
location: region:123037387-125009311:1
so has part: feature:123037387-123037687:1:exon
so has part: feature:123272056-123272285:1:exon
so has part: feature:123338652-123338839:1:exon
so has part: feature:123459415-123459551:1:exon
so has part: feature:123738404-123738605:1:exon
so has part: feature:123994510-123994625:1:exon
so has part: feature:124071561-124071660:1:exon
so has part: feature:124237780-124237886:1:exon
so has part: feature:124448708-124448882:1:exon
so has part: feature:124682935-124683137:1:exon
so has part: feature:124845764-124845943:1:exon
so has part: feature:125007856-125007962:1:exon
so has part: feature:125009226-125009311:1:exon

position:125009311:1
position: 125009311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123037387-123037687:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123272056-123272285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123338652-123338839:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123459415-123459551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:123738404-123738605:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:123994510-123994625:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:124071561-124071660:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:124237780-124237886:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:124448708-124448882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:124682935-124683137:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:124845764-124845943:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:125007856-125007962:1:exon

position:125007856:1
position: 125007856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125007962:1
position: 125007962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:125009226-125009311:1:exon

CLHC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: CLHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: clathrin heavy chain linker domain-containing protein 1
translation: MELSTDDNQSCHFSSLSWRSSVLPSIISESKKDFINNISEQIKTELQKTDCPDKGPDEQRYIVYKHAFDKVIHYCSAYKHILSFIKQEYDDYISFLQKERCYANYLHGKLQLIAAEPATLVNLQQRATELQDKIEIINQDSCKFQTNLQKLKEAELATTPPANEELHLAKIDPARPVQGLTSEESVDIKALTKHLYYLEKKLQKLQQIKDTKYVPFQVQDKLQQTLHHAVLKRKEATSGNYKLKLRHNRLKILSDAIMSWTESDKHVPLLKFLPQTLLTAASLKASTAEQGSHTSREYEEDDPSKIKEAEILLQCIERFNELLESGQYEAAAIHAATSPQNILQHMKTVQRLKSITITKGETSPLLLYFESVLNSSAATSYPPDVDLSLEAVNCALKENRLDLVVHWITQQRLSFSDVLGDVICKYGEKEPQHMDMCLALAQAVYTKCALYVKAVLCMCLRGQICGAMEYIHNWKTFTLDDYLFLLKNCASMNLIQKLTQPWNGKPAVISVGFAVLALVSTDNKEIGFQLLETIKISNYKTLEQVILTDEICSPEGWKKIADECSINNYNALAEEIMSIITSQDGILEISGNDDDRKIMEHVFM
SIO_010081: CLHC1
subclass of: SO_0000673
so part of: CLHC1
location: join(123272076..123272285,123338652..123338839,123459415..123459551,123738404..123738605,123994510..123994625,124071561..124071660,124237780..124237886,124448708..124448882,124682935..124683137,124845764..124845943,125009226..125009422)
location: region:123272076-125009422:1
so has part: feature:123272076-123272285:1:exon
so has part: feature:123338652-123338839:1:exon
so has part: feature:123459415-123459551:1:exon
so has part: feature:123738404-123738605:1:exon
so has part: feature:123994510-123994625:1:exon
so has part: feature:124071561-124071660:1:exon
so has part: feature:124237780-124237886:1:exon
so has part: feature:124448708-124448882:1:exon
so has part: feature:124682935-124683137:1:exon
so has part: feature:124845764-124845943:1:exon
so has part: feature:125009226-125009422:1:exon

XP_043911117.1
type: Protein
SIO_000068: ncbiprotein

position:123272076:1
position: 123272076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125009422:1
position: 125009422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123272076-123272285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123338652-123338839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123459415-123459551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123738404-123738605:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:123994510-123994625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:124071561-124071660:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:124237780-124237886:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:124448708-124448882:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:124682935-124683137:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:124845764-124845943:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:125009226-125009422:1:exon

PNPT1
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: PNPT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 126553497..128198348
location: region:126553497-128198348:1
so has part: feature:126553497-128198348:1:exon
subclass of: SO_0000010

122788202
type: Gene
SIO_000068: ncbigene

position:126553497:1
position: 126553497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128198348:1
position: 128198348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126553497-128198348:1:exon

PNPT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: PNPT1
product: polyribonucleotide nucleotidyltransferase 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055211.1
SIO_010081: PNPT1
subclass of: SO_0000673
so part of: PNPT1
location: join(126553497..126553762,126559660..126559720,126572663..126572737,126572903..126573008,126609132..126609181,126644185..126644248,126644339..126644386,126684589..126684702,126797869..126798055,126880293..126880344,127010188..127010245,127074843..127074939,127263987..127264089,127316157..127316227,127415108..127415144,127553651..127553717,127608971..127609060,127725981..127726034,127726383..127726492,127804591..127804662,127851458..127851521,127931919..127932002,127971588..127971671,128152478..128152584,128152694..128152749,128152896..128152974,128155497..128155544,128196857..128198348)
location: region:126553497-128198348:1
so has part: feature:126553497-126553762:1:exon
so has part: feature:126559660-126559720:1:exon
so has part: feature:126572663-126572737:1:exon
so has part: feature:126572903-126573008:1:exon
so has part: feature:126609132-126609181:1:exon
so has part: feature:126644185-126644248:1:exon
so has part: feature:126644339-126644386:1:exon
so has part: feature:126684589-126684702:1:exon
so has part: feature:126797869-126798055:1:exon
so has part: feature:126880293-126880344:1:exon
so has part: feature:127010188-127010245:1:exon
so has part: feature:127074843-127074939:1:exon
so has part: feature:127263987-127264089:1:exon
so has part: feature:127316157-127316227:1:exon
so has part: feature:127415108-127415144:1:exon
so has part: feature:127553651-127553717:1:exon
so has part: feature:127608971-127609060:1:exon
so has part: feature:127725981-127726034:1:exon
so has part: feature:127726383-127726492:1:exon
so has part: feature:127804591-127804662:1:exon
so has part: feature:127851458-127851521:1:exon
so has part: feature:127931919-127932002:1:exon
so has part: feature:127971588-127971671:1:exon
so has part: feature:128152478-128152584:1:exon
so has part: feature:128152694-128152749:1:exon
so has part: feature:128152896-128152974:1:exon
so has part: feature:128155497-128155544:1:exon
so has part: feature:128196857-128198348:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126553497-126553762:1:exon

position:126553762:1
position: 126553762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:126559660-126559720:1:exon

position:126559660:1
position: 126559660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126559720:1
position: 126559720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:126572663-126572737:1:exon

position:126572663:1
position: 126572663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126572737:1
position: 126572737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:126572903-126573008:1:exon

position:126572903:1
position: 126572903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126573008:1
position: 126573008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:126609132-126609181:1:exon

position:126609132:1
position: 126609132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126609181:1
position: 126609181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:126644185-126644248:1:exon

position:126644185:1
position: 126644185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126644248:1
position: 126644248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:126644339-126644386:1:exon

position:126644339:1
position: 126644339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126644386:1
position: 126644386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:126684589-126684702:1:exon

position:126684589:1
position: 126684589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126684702:1
position: 126684702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:126797869-126798055:1:exon

position:126797869:1
position: 126797869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126798055:1
position: 126798055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:126880293-126880344:1:exon

position:126880293:1
position: 126880293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126880344:1
position: 126880344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:127010188-127010245:1:exon

position:127010188:1
position: 127010188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127010245:1
position: 127010245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:127074843-127074939:1:exon

position:127074843:1
position: 127074843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127074939:1
position: 127074939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:127263987-127264089:1:exon

position:127263987:1
position: 127263987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127264089:1
position: 127264089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:127316157-127316227:1:exon

position:127316157:1
position: 127316157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127316227:1
position: 127316227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:127415108-127415144:1:exon

position:127415108:1
position: 127415108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127415144:1
position: 127415144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:127553651-127553717:1:exon

position:127553651:1
position: 127553651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127553717:1
position: 127553717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:127608971-127609060:1:exon

position:127608971:1
position: 127608971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127609060:1
position: 127609060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:127725981-127726034:1:exon

position:127725981:1
position: 127725981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127726034:1
position: 127726034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:127726383-127726492:1:exon

position:127726383:1
position: 127726383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127726492:1
position: 127726492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:127804591-127804662:1:exon

position:127804591:1
position: 127804591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127804662:1
position: 127804662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:127851458-127851521:1:exon

position:127851458:1
position: 127851458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127851521:1
position: 127851521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:127931919-127932002:1:exon

position:127931919:1
position: 127931919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127932002:1
position: 127932002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:127971588-127971671:1:exon

position:127971588:1
position: 127971588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127971671:1
position: 127971671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:128152478-128152584:1:exon

position:128152478:1
position: 128152478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128152584:1
position: 128152584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:128152694-128152749:1:exon

position:128152694:1
position: 128152694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128152749:1
position: 128152749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:128152896-128152974:1:exon

position:128152896:1
position: 128152896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128152974:1
position: 128152974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:128155497-128155544:1:exon

position:128155497:1
position: 128155497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128155544:1
position: 128155544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:128196857-128198348:1:exon

position:128196857:1
position: 128196857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PNPT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: PNPT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyribonucleotide nucleotidyltransferase 1, mitochondrial
translation: MAASCQYALNMHKLPIFRIITHVHCISLNKSRAFHRCVFAKELHQCVQYSTWNSNAVQKKSAVDLGSKKLEISTGKLARFADGCASVQLGDTTVMVTAVSKTKATSSQFMPLVVDFRQKAAAAGRIPTNYLRRELGSTDNEILTSRMIDRCIRPLFPAGYFYDTQVVCNLLAVDGVNDPDVLAVNGASVALALSDIPWNGPIGAVRVGMVDGEFVINPTRKEMTSSTLNLVVAGASQSQVVMLEASAENVLQQDFCHAIKLGVKHTQQIIQTINQLAKEHGVVKRTPQKLFAAPLEIVEYTRQLAAEKIYAVFTDFSHDKISRDEAVNKIRLETEEKVREKFPEADSYEVIESFNVISKDTFRNLVLNEYRRCDGRDLTSLRNISCEVDLFKPLHGSALFQRGQTQVLCTVTFDSLESSVKTDIITTLVSGLKDKNFMLHYEFPPYATNETGKLTGINRRELGHGALAEKALKPVVPKDFPFTIRVTAEVLESNGSSSMASACSGSMALMDAGVPISAPVAGVAIGLVTKSSAEKPGEIQDYRLLTDILGIEDYHGDMDFKMAGTSKGITALQADVKIPGLPLKIVMEAIQQATVAKREILNIMNKTIAKPRPNRKENGPVVEKVHVPLSKRARFVGPGGYNLRKLQAETGVTISQLDEESFSVFAPAPNAMNEAREFIHEICKDDQEQQLEFGAVYTATITEIRDIGVMVKLYPNMTPVLLHNSQLDNRRIKHPSALGLEVGQQIQVKYFGRDPTDGRMRLSRKVLQSPATMTVKTLSDKSSISIAPNSSPSSDSPI
SIO_010081: PNPT1
subclass of: SO_0000673
so part of: PNPT1
location: join(126553560..126553762,126559660..126559720,126572663..126572737,126572903..126573008,126609132..126609181,126644185..126644248,126644339..126644386,126684589..126684702,126797869..126798055,126880293..126880344,127010188..127010245,127074843..127074939,127263987..127264089,127316157..127316227,127415108..127415144,127553651..127553717,127608971..127609060,127725981..127726034,127726383..127726492,127804591..127804662,127851458..127851521,127931919..127932002,127971588..127971671,128152478..128152584,128152694..128152749,128152896..128152974,128155497..128155544,128196857..128197012)
location: region:126553560-128197012:1
so has part: feature:126553560-126553762:1:exon
so has part: feature:126559660-126559720:1:exon
so has part: feature:126572663-126572737:1:exon
so has part: feature:126572903-126573008:1:exon
so has part: feature:126609132-126609181:1:exon
so has part: feature:126644185-126644248:1:exon
so has part: feature:126644339-126644386:1:exon
so has part: feature:126684589-126684702:1:exon
so has part: feature:126797869-126798055:1:exon
so has part: feature:126880293-126880344:1:exon
so has part: feature:127010188-127010245:1:exon
so has part: feature:127074843-127074939:1:exon
so has part: feature:127263987-127264089:1:exon
so has part: feature:127316157-127316227:1:exon
so has part: feature:127415108-127415144:1:exon
so has part: feature:127553651-127553717:1:exon
so has part: feature:127608971-127609060:1:exon
so has part: feature:127725981-127726034:1:exon
so has part: feature:127726383-127726492:1:exon
so has part: feature:127804591-127804662:1:exon
so has part: feature:127851458-127851521:1:exon
so has part: feature:127931919-127932002:1:exon
so has part: feature:127971588-127971671:1:exon
so has part: feature:128152478-128152584:1:exon
so has part: feature:128152694-128152749:1:exon
so has part: feature:128152896-128152974:1:exon
so has part: feature:128155497-128155544:1:exon
so has part: feature:128196857-128197012:1:exon

XP_043911146.1
type: Protein
SIO_000068: ncbiprotein

position:126553560:1
position: 126553560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128197012:1
position: 128197012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126553560-126553762:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126559660-126559720:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126572663-126572737:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126572903-126573008:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:126609132-126609181:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126644185-126644248:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:126644339-126644386:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:126684589-126684702:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126797869-126798055:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:126880293-126880344:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:127010188-127010245:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:127074843-127074939:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:127263987-127264089:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:127316157-127316227:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:127415108-127415144:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:127553651-127553717:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:127608971-127609060:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:127725981-127726034:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:127726383-127726492:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:127804591-127804662:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:127851458-127851521:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:127931919-127932002:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:127971588-127971671:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:128152478-128152584:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:128152694-128152749:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:128152896-128152974:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:128155497-128155544:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:128196857-128197012:1:exon

PPP4R3B
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: PPP4R3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 128501187..130690803
location: region:128501187-130690803:1
so has part: feature:128501187-130690803:1:exon
subclass of: SO_0000010

122788210
type: Gene
SIO_000068: ncbigene

position:128501187:1
position: 128501187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130690803:1
position: 130690803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128501187-130690803:1:exon

PPP4R3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: PPP4R3B
product: protein phosphatase 4 regulatory subunit 3B, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055224.1
SIO_010081: PPP4R3B
subclass of: SO_0000673
so part of: PPP4R3B
location: join(128501187..128501565,128502348..128502403,128764990..128765088,128972916..128973539,128975632..128975709,129093704..129093820,129270340..129270456,129351395..129351526,129475985..129476087,129684028..129684228,129964897..129964938,130125955..130126113,130274229..130274398,130303324..130303463,130363936..130364093,130489438..130489628,130688880..130690803)
location: region:128501187-130690803:1
so has part: feature:128501187-128501565:1:exon
so has part: feature:128502348-128502403:1:exon
so has part: feature:128764990-128765088:1:exon
so has part: feature:128972916-128973539:1:exon
so has part: feature:128975632-128975709:1:exon
so has part: feature:129093704-129093820:1:exon
so has part: feature:129270340-129270456:1:exon
so has part: feature:129351395-129351526:1:exon
so has part: feature:129475985-129476087:1:exon
so has part: feature:129684028-129684228:1:exon
so has part: feature:129964897-129964938:1:exon
so has part: feature:130125955-130126113:1:exon
so has part: feature:130274229-130274398:1:exon
so has part: feature:130303324-130303463:1:exon
so has part: feature:130363936-130364093:1:exon
so has part: feature:130489438-130489628:1:exon
so has part: feature:130688880-130690803:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128501187-128501565:1:exon

position:128501565:1
position: 128501565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:128502348-128502403:1:exon

position:128502348:1
position: 128502348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128502403:1
position: 128502403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:128764990-128765088:1:exon

position:128764990:1
position: 128764990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128765088:1
position: 128765088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:128972916-128973539:1:exon

position:128972916:1
position: 128972916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128973539:1
position: 128973539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:128975632-128975709:1:exon

position:128975632:1
position: 128975632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128975709:1
position: 128975709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:129093704-129093820:1:exon

position:129093704:1
position: 129093704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129093820:1
position: 129093820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:129270340-129270456:1:exon

position:129270340:1
position: 129270340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129270456:1
position: 129270456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:129351395-129351526:1:exon

position:129351395:1
position: 129351395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129351526:1
position: 129351526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:129475985-129476087:1:exon

position:129475985:1
position: 129475985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129476087:1
position: 129476087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:129684028-129684228:1:exon

position:129684028:1
position: 129684028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129684228:1
position: 129684228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:129964897-129964938:1:exon

position:129964897:1
position: 129964897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129964938:1
position: 129964938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:130125955-130126113:1:exon

position:130125955:1
position: 130125955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130126113:1
position: 130126113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:130274229-130274398:1:exon

position:130274229:1
position: 130274229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130274398:1
position: 130274398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:130303324-130303463:1:exon

position:130303324:1
position: 130303324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130303463:1
position: 130303463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:130363936-130364093:1:exon

position:130363936:1
position: 130363936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130364093:1
position: 130364093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:130489438-130489628:1:exon

position:130489438:1
position: 130489438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130489628:1
position: 130489628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:130688880-130690803:1:exon

position:130688880:1
position: 130688880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP4R3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: PPP4R3B
product: protein phosphatase 4 regulatory subunit 3B, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055233.1
SIO_010081: PPP4R3B
subclass of: SO_0000673
so part of: PPP4R3B
location: join(128501187..128501565,128502348..128502403,128764990..128765088,128972916..128973539,128975632..128975709,129093704..129093820,129270340..129270456,129351395..129351526,129475985..129476087,129684028..129684228,129964897..129964938,130125955..130126113,130274229..130274398,130303324..130303463,130363936..130364093,130489438..130489628,130688883..130690803)
location: region:128501187-130690803:1
so has part: feature:128501187-128501565:1:exon
so has part: feature:128502348-128502403:1:exon
so has part: feature:128764990-128765088:1:exon
so has part: feature:128972916-128973539:1:exon
so has part: feature:128975632-128975709:1:exon
so has part: feature:129093704-129093820:1:exon
so has part: feature:129270340-129270456:1:exon
so has part: feature:129351395-129351526:1:exon
so has part: feature:129475985-129476087:1:exon
so has part: feature:129684028-129684228:1:exon
so has part: feature:129964897-129964938:1:exon
so has part: feature:130125955-130126113:1:exon
so has part: feature:130274229-130274398:1:exon
so has part: feature:130303324-130303463:1:exon
so has part: feature:130363936-130364093:1:exon
so has part: feature:130489438-130489628:1:exon
so has part: feature:130688883-130690803:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128501187-128501565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128502348-128502403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128764990-128765088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128972916-128973539:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128975632-128975709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129093704-129093820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129270340-129270456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129351395-129351526:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129475985-129476087:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129684028-129684228:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:129964897-129964938:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130125955-130126113:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:130274229-130274398:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:130303324-130303463:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:130363936-130364093:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:130489438-130489628:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:130688883-130690803:1:exon

position:130688883:1
position: 130688883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP4R3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: PPP4R3B
product: protein phosphatase 4 regulatory subunit 3B, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055261.1
SIO_010081: PPP4R3B
subclass of: SO_0000673
so part of: PPP4R3B
location: join(128501187..128501565,128502348..128502403,128764990..128765088,128972916..128973539,128975632..128975709,129093704..129093820,129270340..129270456,129351395..129351526,129475985..129476087,129964897..129964938,130125955..130126113,130274229..130274398,130303324..130303463,130363936..130364093,130489438..130489628,130688883..130690803)
location: region:128501187-130690803:1
so has part: feature:128501187-128501565:1:exon
so has part: feature:128502348-128502403:1:exon
so has part: feature:128764990-128765088:1:exon
so has part: feature:128972916-128973539:1:exon
so has part: feature:128975632-128975709:1:exon
so has part: feature:129093704-129093820:1:exon
so has part: feature:129270340-129270456:1:exon
so has part: feature:129351395-129351526:1:exon
so has part: feature:129475985-129476087:1:exon
so has part: feature:129964897-129964938:1:exon
so has part: feature:130125955-130126113:1:exon
so has part: feature:130274229-130274398:1:exon
so has part: feature:130303324-130303463:1:exon
so has part: feature:130363936-130364093:1:exon
so has part: feature:130489438-130489628:1:exon
so has part: feature:130688883-130690803:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128501187-128501565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128502348-128502403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128764990-128765088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128972916-128973539:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128975632-128975709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129093704-129093820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129270340-129270456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129351395-129351526:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129475985-129476087:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129964897-129964938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:130125955-130126113:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130274229-130274398:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:130303324-130303463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:130363936-130364093:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:130489438-130489628:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:130688883-130690803:1:exon

PPP4R3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: PPP4R3B
product: protein phosphatase 4 regulatory subunit 3B, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055241.1
SIO_010081: PPP4R3B
subclass of: SO_0000673
so part of: PPP4R3B
location: join(128501188..128501565,128502348..128502403,128764990..128765088,128972916..128973539,128975632..128975709,129093704..129093820,129270340..129270456,129351395..129351526,129475985..129476087,129964897..129964938,130125955..130126113,130274229..130274398,130303324..130303463,130363936..130364093,130489438..130489628,130688880..130690803)
location: region:128501188-130690803:1
so has part: feature:128501188-128501565:1:exon
so has part: feature:128502348-128502403:1:exon
so has part: feature:128764990-128765088:1:exon
so has part: feature:128972916-128973539:1:exon
so has part: feature:128975632-128975709:1:exon
so has part: feature:129093704-129093820:1:exon
so has part: feature:129270340-129270456:1:exon
so has part: feature:129351395-129351526:1:exon
so has part: feature:129475985-129476087:1:exon
so has part: feature:129964897-129964938:1:exon
so has part: feature:130125955-130126113:1:exon
so has part: feature:130274229-130274398:1:exon
so has part: feature:130303324-130303463:1:exon
so has part: feature:130363936-130364093:1:exon
so has part: feature:130489438-130489628:1:exon
so has part: feature:130688880-130690803:1:exon

position:128501188:1
position: 128501188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128501188-128501565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128502348-128502403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128764990-128765088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128972916-128973539:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128975632-128975709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129093704-129093820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129270340-129270456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129351395-129351526:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129475985-129476087:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129964897-129964938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:130125955-130126113:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130274229-130274398:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:130303324-130303463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:130363936-130364093:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:130489438-130489628:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:130688880-130690803:1:exon

PPP4R3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: PPP4R3B
product: protein phosphatase 4 regulatory subunit 3B, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055250.1
SIO_010081: PPP4R3B
subclass of: SO_0000673
so part of: PPP4R3B
location: join(128501188..128501565,128502348..128502403,128764990..128765088,128975632..128975709,129093704..129093820,129270340..129270456,129351395..129351526,129475985..129476087,129684028..129684228,129964897..129964938,130125955..130126113,130274229..130274398,130303324..130303463,130363936..130364093,130489438..130489628,130688880..130690803)
location: region:128501188-130690803:1
so has part: feature:128501188-128501565:1:exon
so has part: feature:128502348-128502403:1:exon
so has part: feature:128764990-128765088:1:exon
so has part: feature:128975632-128975709:1:exon
so has part: feature:129093704-129093820:1:exon
so has part: feature:129270340-129270456:1:exon
so has part: feature:129351395-129351526:1:exon
so has part: feature:129475985-129476087:1:exon
so has part: feature:129684028-129684228:1:exon
so has part: feature:129964897-129964938:1:exon
so has part: feature:130125955-130126113:1:exon
so has part: feature:130274229-130274398:1:exon
so has part: feature:130303324-130303463:1:exon
so has part: feature:130363936-130364093:1:exon
so has part: feature:130489438-130489628:1:exon
so has part: feature:130688880-130690803:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128501188-128501565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128502348-128502403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128764990-128765088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128975632-128975709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129093704-129093820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129270340-129270456:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129351395-129351526:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129475985-129476087:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129684028-129684228:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129964897-129964938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:130125955-130126113:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130274229-130274398:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:130303324-130303463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:130363936-130364093:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:130489438-130489628:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:130688880-130690803:1:exon

PPP4R3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: PPP4R3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 4 regulatory subunit 3B isoform X1
translation: MSDTRRRVKVYTLNEDRQWDDRGTGHVASTYVDRLKGISLLVRAESDGSLLLESKINPDTAYQKQQDTLIVWSEAENYDLALSFQEKAGCDEIWEKICQVQGKDPSVDITQDLIDESEEERFEEMPETSHLIELPPCELGKLEEIADLVTSVLSSPIRREKLALALENEGYLKKLLQLFQVCESVGNTDGLHHLYEIIRGILFLNKATLFEVMFSDECIMDVVGCLEYDPSLPQPKRHREFLTTTAKFKEVIPITDSELRQKIHQTYRVQYIQDIILPTPSVFEENFLSTLTSFIFFNKVEIVSMLQEDEKFLSEVFAQLTDEATDDDKRRELVNFFKEFCAFSQTLQPQNRDAFFKTLANLGILPALEIVMGMDDIQVRSAATDIFSYLVEFSPSMVREFVMQEAQQSDYEILLINVVIEQMICDTDPELGGAVQLMGLLRTLIDPENMLATSNKTEKTEFLNFFYKHCMHVLTAPLLANTTEDRISKESDVGAVPLHPKEVQLRGAGQVQENRDGAKQWTVRFANRDAQLEKQKKIEMEYANESVRHRACQTRCDAVTGSSKSAAVCPDNFQTAQLLALILELLTFCVEHHTYHIKNYILNKDLLRRVLVLMNSKHTFLALCALRFMRRIIGLKDEFYNRYIIKGNLFEPVINALVDNGTRYNLLNSAVVELFEFIRVEDIKSLTAHIVENFYKALEPIEYVQTFKGLKTRYEQEKDRQSQKLSRYRRDARALDEDEEMWFNEDDDEEGEAVVPPVEKAKSEEDFPDSYGKFIEAKKAKENEDKENLPKRTAGGNFKFTFSHSSSGTNNNSKSGATQASPGSPNSSSSKSSNSSSSVSSAKQGGLVGLVDYPDDEEDEDEDASPRKRPRLGS
SIO_010081: PPP4R3B
subclass of: SO_0000673
so part of: PPP4R3B
location: join(128501424..128501565,128502348..128502403,128764990..128765088,128972916..128973539,128975632..128975709,129093704..129093820,129270340..129270456,129351395..129351526,129475985..129476087,129684028..129684228,129964897..129964938,130125955..130126113,130274229..130274398,130303324..130303463,130363936..130364093,130489438..130489628,130688880..130688975)
location: region:128501424-130688975:1
so has part: feature:128501424-128501565:1:exon
so has part: feature:128502348-128502403:1:exon
so has part: feature:128764990-128765088:1:exon
so has part: feature:128972916-128973539:1:exon
so has part: feature:128975632-128975709:1:exon
so has part: feature:129093704-129093820:1:exon
so has part: feature:129270340-129270456:1:exon
so has part: feature:129351395-129351526:1:exon
so has part: feature:129475985-129476087:1:exon
so has part: feature:129684028-129684228:1:exon
so has part: feature:129964897-129964938:1:exon
so has part: feature:130125955-130126113:1:exon
so has part: feature:130274229-130274398:1:exon
so has part: feature:130303324-130303463:1:exon
so has part: feature:130363936-130364093:1:exon
so has part: feature:130489438-130489628:1:exon
so has part: feature:130688880-130688975:1:exon

XP_043911159.1
type: Protein
SIO_000068: ncbiprotein

position:128501424:1
position: 128501424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130688975:1
position: 130688975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128501424-128501565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128502348-128502403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128764990-128765088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128972916-128973539:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128975632-128975709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129093704-129093820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129270340-129270456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129351395-129351526:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129475985-129476087:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129684028-129684228:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:129964897-129964938:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130125955-130126113:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:130274229-130274398:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:130303324-130303463:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:130363936-130364093:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:130489438-130489628:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:130688880-130688975:1:exon

PPP4R3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: PPP4R3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 4 regulatory subunit 3B isoform X2
translation: MSDTRRRVKVYTLNEDRQWDDRGTGHVASTYVDRLKGISLLVRAESDGSLLLESKINPDTAYQKQQDTLIVWSEAENYDLALSFQEKAGCDEIWEKICQVQGKDPSVDITQDLIDESEEERFEEMPETSHLIELPPCELGKLEEIADLVTSVLSSPIRREKLALALENEGYLKKLLQLFQVCESVGNTDGLHHLYEIIRGILFLNKATLFEVMFSDECIMDVVGCLEYDPSLPQPKRHREFLTTTAKFKEVIPITDSELRQKIHQTYRVQYIQDIILPTPSVFEENFLSTLTSFIFFNKVEIVSMLQEDEKFLSEVFAQLTDEATDDDKRRELVNFFKEFCAFSQTLQPQNRDAFFKTLANLGILPALEIVMGMDDIQVRSAATDIFSYLVEFSPSMVREFVMQEAQQSDYEILLINVVIEQMICDTDPELGGAVQLMGLLRTLIDPENMLATSNKTEKTEFLNFFYKHCMHVLTAPLLANTTEDRISKESDVGAVPLHPKEVQLRGAGQVQENRDGAKQWTVRFANRDAQLEKQKKIEMEYANESVRHRACQTRCDAVTGSSKSAAVCPDNFQTAQLLALILELLTFCVEHHTYHIKNYILNKDLLRRVLVLMNSKHTFLALCALRFMRRIIGLKDEFYNRYIIKGNLFEPVINALVDNGTRYNLLNSAVVELFEFIRVEDIKSLTAHIVENFYKALEPIEYVQTFKGLKTRYEQEKDRQSQKLSRYRRDARALDEDEEMWFNEDDDEEGEAVVPPVEKAKSEEDFPDSYGKFIEAKKAKENEDKENLPKRTAGGNFKFTFSHSSSGTNNNSKSGATQASPGSPNSSSSKSSNSSSSVSSAKGGLVGLVDYPDDEEDEDEDASPRKRPRLGS
SIO_010081: PPP4R3B
subclass of: SO_0000673
so part of: PPP4R3B
location: join(128501424..128501565,128502348..128502403,128764990..128765088,128972916..128973539,128975632..128975709,129093704..129093820,129270340..129270456,129351395..129351526,129475985..129476087,129684028..129684228,129964897..129964938,130125955..130126113,130274229..130274398,130303324..130303463,130363936..130364093,130489438..130489628,130688883..130688975)
location: region:128501424-130688975:1
so has part: feature:128501424-128501565:1:exon
so has part: feature:128502348-128502403:1:exon
so has part: feature:128764990-128765088:1:exon
so has part: feature:128972916-128973539:1:exon
so has part: feature:128975632-128975709:1:exon
so has part: feature:129093704-129093820:1:exon
so has part: feature:129270340-129270456:1:exon
so has part: feature:129351395-129351526:1:exon
so has part: feature:129475985-129476087:1:exon
so has part: feature:129684028-129684228:1:exon
so has part: feature:129964897-129964938:1:exon
so has part: feature:130125955-130126113:1:exon
so has part: feature:130274229-130274398:1:exon
so has part: feature:130303324-130303463:1:exon
so has part: feature:130363936-130364093:1:exon
so has part: feature:130489438-130489628:1:exon
so has part: feature:130688883-130688975:1:exon

XP_043911168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128501424-128501565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128502348-128502403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128764990-128765088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128972916-128973539:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128975632-128975709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129093704-129093820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129270340-129270456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129351395-129351526:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129475985-129476087:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129684028-129684228:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:129964897-129964938:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130125955-130126113:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:130274229-130274398:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:130303324-130303463:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:130363936-130364093:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:130489438-130489628:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:130688883-130688975:1:exon

PPP4R3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: PPP4R3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 4 regulatory subunit 3B isoform X3
translation: MSDTRRRVKVYTLNEDRQWDDRGTGHVASTYVDRLKGISLLVRAESDGSLLLESKINPDTAYQKQQDTLIVWSEAENYDLALSFQEKAGCDEIWEKICQVQGKDPSVDITQDLIDESEEERFEEMPETSHLIELPPCELGKLEEIADLVTSVLSSPIRREKLALALENEGYLKKLLQLFQVCESVGNTDGLHHLYEIIRGILFLNKATLFEVMFSDECIMDVVGCLEYDPSLPQPKRHREFLTTTAKFKEVIPITDSELRQKIHQTYRVQYIQDIILPTPSVFEENFLSTLTSFIFFNKVEIVSMLQEDEKFLSEVFAQLTDEATDDDKRRELVNFFKEFCAFSQTLQPQNRDAFFKTLANLGILPALEIVMGMDDIQVRSAATDIFSYLVEFSPSMVREFVMQEAQQSDYEILLINVVIEQMICDTDPELGGAVQLMGLLRTLIDPENMLATSNKTEKTEFLNFFYKHCMHVLTAPLLANTTEDRISKDAVTGSSKSAAVCPDNFQTAQLLALILELLTFCVEHHTYHIKNYILNKDLLRRVLVLMNSKHTFLALCALRFMRRIIGLKDEFYNRYIIKGNLFEPVINALVDNGTRYNLLNSAVVELFEFIRVEDIKSLTAHIVENFYKALEPIEYVQTFKGLKTRYEQEKDRQSQKLSRYRRDARALDEDEEMWFNEDDDEEGEAVVPPVEKAKSEEDFPDSYGKFIEAKKAKENEDKENLPKRTAGGNFKFTFSHSSSGTNNNSKSGATQASPGSPNSSSSKSSNSSSSVSSAKQGGLVGLVDYPDDEEDEDEDASPRKRPRLGS
SIO_010081: PPP4R3B
subclass of: SO_0000673
so part of: PPP4R3B
location: join(128501424..128501565,128502348..128502403,128764990..128765088,128972916..128973539,128975632..128975709,129093704..129093820,129270340..129270456,129351395..129351526,129475985..129476087,129964897..129964938,130125955..130126113,130274229..130274398,130303324..130303463,130363936..130364093,130489438..130489628,130688880..130688975)
location: region:128501424-130688975:1
so has part: feature:128501424-128501565:1:exon
so has part: feature:128502348-128502403:1:exon
so has part: feature:128764990-128765088:1:exon
so has part: feature:128972916-128973539:1:exon
so has part: feature:128975632-128975709:1:exon
so has part: feature:129093704-129093820:1:exon
so has part: feature:129270340-129270456:1:exon
so has part: feature:129351395-129351526:1:exon
so has part: feature:129475985-129476087:1:exon
so has part: feature:129964897-129964938:1:exon
so has part: feature:130125955-130126113:1:exon
so has part: feature:130274229-130274398:1:exon
so has part: feature:130303324-130303463:1:exon
so has part: feature:130363936-130364093:1:exon
so has part: feature:130489438-130489628:1:exon
so has part: feature:130688880-130688975:1:exon

XP_043911176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128501424-128501565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128502348-128502403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128764990-128765088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128972916-128973539:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128975632-128975709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129093704-129093820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129270340-129270456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129351395-129351526:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129475985-129476087:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129964897-129964938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:130125955-130126113:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130274229-130274398:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:130303324-130303463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:130363936-130364093:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:130489438-130489628:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:130688880-130688975:1:exon

PPP4R3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: PPP4R3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 4 regulatory subunit 3B isoform X5
translation: MSDTRRRVKVYTLNEDRQWDDRGTGHVASTYVDRLKGISLLVRAESDGSLLLESKINPDTAYQKQQDTLIVWSEAENYDLALSFQEKAGCDEIWEKICQVQGKDPSVDITQDLIDESEEERFEEMPETSHLIELPPCELGKLEEIADLVTSVLSSPIRREKLALALENEGYLKKLLQLFQVCESVGNTDGLHHLYEIIRGILFLNKATLFEVMFSDECIMDVVGCLEYDPSLPQPKRHREFLTTTAKFKEVIPITDSELRQKIHQTYRVQYIQDIILPTPSVFEENFLSTLTSFIFFNKVEIVSMLQEDEKFLSEVFAQLTDEATDDDKRRELVNFFKEFCAFSQTLQPQNRDAFFKTLANLGILPALEIVMGMDDIQVRSAATDIFSYLVEFSPSMVREFVMQEAQQSDYEILLINVVIEQMICDTDPELGGAVQLMGLLRTLIDPENMLATSNKTEKTEFLNFFYKHCMHVLTAPLLANTTEDRISKDAVTGSSKSAAVCPDNFQTAQLLALILELLTFCVEHHTYHIKNYILNKDLLRRVLVLMNSKHTFLALCALRFMRRIIGLKDEFYNRYIIKGNLFEPVINALVDNGTRYNLLNSAVVELFEFIRVEDIKSLTAHIVENFYKALEPIEYVQTFKGLKTRYEQEKDRQSQKLSRYRRDARALDEDEEMWFNEDDDEEGEAVVPPVEKAKSEEDFPDSYGKFIEAKKAKENEDKENLPKRTAGGNFKFTFSHSSSGTNNNSKSGATQASPGSPNSSSSKSSNSSSSVSSAKGGLVGLVDYPDDEEDEDEDASPRKRPRLGS
SIO_010081: PPP4R3B
subclass of: SO_0000673
so part of: PPP4R3B
location: join(128501424..128501565,128502348..128502403,128764990..128765088,128972916..128973539,128975632..128975709,129093704..129093820,129270340..129270456,129351395..129351526,129475985..129476087,129964897..129964938,130125955..130126113,130274229..130274398,130303324..130303463,130363936..130364093,130489438..130489628,130688883..130688975)
location: region:128501424-130688975:1
so has part: feature:128501424-128501565:1:exon
so has part: feature:128502348-128502403:1:exon
so has part: feature:128764990-128765088:1:exon
so has part: feature:128972916-128973539:1:exon
so has part: feature:128975632-128975709:1:exon
so has part: feature:129093704-129093820:1:exon
so has part: feature:129270340-129270456:1:exon
so has part: feature:129351395-129351526:1:exon
so has part: feature:129475985-129476087:1:exon
so has part: feature:129964897-129964938:1:exon
so has part: feature:130125955-130126113:1:exon
so has part: feature:130274229-130274398:1:exon
so has part: feature:130303324-130303463:1:exon
so has part: feature:130363936-130364093:1:exon
so has part: feature:130489438-130489628:1:exon
so has part: feature:130688883-130688975:1:exon

XP_043911196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128501424-128501565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128502348-128502403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128764990-128765088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128972916-128973539:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128975632-128975709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129093704-129093820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129270340-129270456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129351395-129351526:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129475985-129476087:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129964897-129964938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:130125955-130126113:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130274229-130274398:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:130303324-130303463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:130363936-130364093:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:130489438-130489628:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:130688883-130688975:1:exon

PPP4R3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: PPP4R3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 4 regulatory subunit 3B isoform X4
translation: MSDTRRRVKVYTLNEDRQWDDRGTGHVASTYVDRLKGISLLVRAESDGSLLLESKINPDTAYQKQQDTLIVWSEAENYDLALSFQEKAGCDEIWEKICQEDEKFLSEVFAQLTDEATDDDKRRELVNFFKEFCAFSQTLQPQNRDAFFKTLANLGILPALEIVMGMDDIQVRSAATDIFSYLVEFSPSMVREFVMQEAQQSDYEILLINVVIEQMICDTDPELGGAVQLMGLLRTLIDPENMLATSNKTEKTEFLNFFYKHCMHVLTAPLLANTTEDRISKESDVGAVPLHPKEVQLRGAGQVQENRDGAKQWTVRFANRDAQLEKQKKIEMEYANESVRHRACQTRCDAVTGSSKSAAVCPDNFQTAQLLALILELLTFCVEHHTYHIKNYILNKDLLRRVLVLMNSKHTFLALCALRFMRRIIGLKDEFYNRYIIKGNLFEPVINALVDNGTRYNLLNSAVVELFEFIRVEDIKSLTAHIVENFYKALEPIEYVQTFKGLKTRYEQEKDRQSQKLSRYRRDARALDEDEEMWFNEDDDEEGEAVVPPVEKAKSEEDFPDSYGKFIEAKKAKENEDKENLPKRTAGGNFKFTFSHSSSGTNNNSKSGATQASPGSPNSSSSKSSNSSSSVSSAKQGGLVGLVDYPDDEEDEDEDASPRKRPRLGS
SIO_010081: PPP4R3B
subclass of: SO_0000673
so part of: PPP4R3B
location: join(128501424..128501565,128502348..128502403,128764990..128765088,128975632..128975709,129093704..129093820,129270340..129270456,129351395..129351526,129475985..129476087,129684028..129684228,129964897..129964938,130125955..130126113,130274229..130274398,130303324..130303463,130363936..130364093,130489438..130489628,130688880..130688975)
location: region:128501424-130688975:1
so has part: feature:128501424-128501565:1:exon
so has part: feature:128502348-128502403:1:exon
so has part: feature:128764990-128765088:1:exon
so has part: feature:128975632-128975709:1:exon
so has part: feature:129093704-129093820:1:exon
so has part: feature:129270340-129270456:1:exon
so has part: feature:129351395-129351526:1:exon
so has part: feature:129475985-129476087:1:exon
so has part: feature:129684028-129684228:1:exon
so has part: feature:129964897-129964938:1:exon
so has part: feature:130125955-130126113:1:exon
so has part: feature:130274229-130274398:1:exon
so has part: feature:130303324-130303463:1:exon
so has part: feature:130363936-130364093:1:exon
so has part: feature:130489438-130489628:1:exon
so has part: feature:130688880-130688975:1:exon

XP_043911185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128501424-128501565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128502348-128502403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128764990-128765088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128975632-128975709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129093704-129093820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129270340-129270456:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129351395-129351526:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129475985-129476087:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129684028-129684228:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129964897-129964938:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:130125955-130126113:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130274229-130274398:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:130303324-130303463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:130363936-130364093:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:130489438-130489628:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:130688880-130688975:1:exon

CFAP36
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: CFAP36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(130950609..132876323)
location: region:130950609-132876323:-1
so has part: feature:130950609-132876323:-1:exon
subclass of: SO_0000010

122788235
type: Gene
SIO_000068: ncbigene

position:130950609:-1
position: 130950609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132876323:-1
position: 132876323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130950609-132876323:-1:exon

CFAP36
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: CFAP36
product: cilia and flagella associated protein 36
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_044055272.1
SIO_010081: CFAP36
subclass of: SO_0000673
so part of: CFAP36
location: complement(join(130950609..130950877,131103329..131103484,131285143..131285318,131528271..131528397,131773506..131773680,131952645..131952732,132295439..132295553,132572624..132572725,132646835..132646899,132875990..132876323))
location: region:130950609-132876323:-1
so has part: feature:132875990-132876323:-1:exon
so has part: feature:132646835-132646899:-1:exon
so has part: feature:132572624-132572725:-1:exon
so has part: feature:132295439-132295553:-1:exon
so has part: feature:131952645-131952732:-1:exon
so has part: feature:131773506-131773680:-1:exon
so has part: feature:131528271-131528397:-1:exon
so has part: feature:131285143-131285318:-1:exon
so has part: feature:131103329-131103484:-1:exon
so has part: feature:130950609-130950877:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132875990-132876323:-1:exon

position:132875990:-1
position: 132875990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:132646835-132646899:-1:exon

position:132646835:-1
position: 132646835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132646899:-1
position: 132646899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:132572624-132572725:-1:exon

position:132572624:-1
position: 132572624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132572725:-1
position: 132572725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:132295439-132295553:-1:exon

position:132295439:-1
position: 132295439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132295553:-1
position: 132295553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:131952645-131952732:-1:exon

position:131952645:-1
position: 131952645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131952732:-1
position: 131952732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:131773506-131773680:-1:exon

position:131773506:-1
position: 131773506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131773680:-1
position: 131773680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:131528271-131528397:-1:exon

position:131528271:-1
position: 131528271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131528397:-1
position: 131528397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:131285143-131285318:-1:exon

position:131285143:-1
position: 131285143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131285318:-1
position: 131285318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:131103329-131103484:-1:exon

position:131103329:-1
position: 131103329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131103484:-1
position: 131103484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:130950609-130950877:-1:exon

position:130950877:-1
position: 130950877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CFAP36
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: CFAP36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 36
translation: MASDSEDCEWIVESIAGLLGSSMWSLPVADFIEQNCSVFDTEEENKLSYTEIHQQYKELIERLLGGYLEEIGITEEQFLDACTSPLLQSDKLQVLFQPLLAAEDFEVFRSLMVQRNIELQLQALHVIQERNGLLPECLMDGADDVTELEQQEIRILKEVLKKSKEEYEQDLAKKRSQTEIGSASNRTKHSGENVNMENMKLKHLQLRQENEVKVEHLQKVNHELTTTTETAVKCTSLGTDEVTKKKIFCGDSNHQNEELFSGSTRKSTIRTLGPLRVVTKMAEPPQETSSSAIKEQSSNEAAEAWVERAKKEAGISGSAVELTETEKEQLKKRTEYLKQQRDKLISAKKERQNKLGQTKEKDVLKPEPPIEQVVTELESEKLEKRRQLAEKLKEEVIKK
SIO_010081: CFAP36
subclass of: SO_0000673
so part of: CFAP36
location: complement(join(130950794..130950877,131103329..131103484,131285143..131285318,131528271..131528397,131773506..131773680,131952645..131952732,132295439..132295553,132572624..132572725,132646835..132646899,132875990..132876101))
location: region:130950794-132876101:-1
so has part: feature:132875990-132876101:-1:exon
so has part: feature:132646835-132646899:-1:exon
so has part: feature:132572624-132572725:-1:exon
so has part: feature:132295439-132295553:-1:exon
so has part: feature:131952645-131952732:-1:exon
so has part: feature:131773506-131773680:-1:exon
so has part: feature:131528271-131528397:-1:exon
so has part: feature:131285143-131285318:-1:exon
so has part: feature:131103329-131103484:-1:exon
so has part: feature:130950794-130950877:-1:exon

XP_043911207.1
type: Protein
SIO_000068: ncbiprotein

position:130950794:-1
position: 130950794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132876101:-1
position: 132876101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132875990-132876101:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132646835-132646899:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132572624-132572725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132295439-132295553:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131952645-131952732:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131773506-131773680:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131528271-131528397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131285143-131285318:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:131103329-131103484:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:130950794-130950877:-1:exon

CCDC88A
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: CCDC88A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 133744336..138117389
location: region:133744336-138117389:1
so has part: feature:133744336-138117389:1:exon
subclass of: SO_0000010

122788243
type: Gene
SIO_000068: ncbigene

position:133744336:1
position: 133744336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138117389:1
position: 138117389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133744336-138117389:1:exon

CCDC88A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: CCDC88A
product: coiled-coil domain containing 88A, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055294.1
SIO_010081: CCDC88A
subclass of: SO_0000673
so part of: CCDC88A
location: join(133744336..133745261,133745347..133745447,134176943..134177051,134383050..134383119,134777558..134777616,134992781..134992864,135109247..135109387,135207488..135207657,135468076..135468157,135599118..135599276,135836797..135836943,135943230..135943374,136019247..136019431,136185959..136186096,136302889..136303959,136304366..136304490,136304598..136304739,136461488..136461661,136487037..136487198,136687955..136688232,136830919..136831062,136897823..136898009,137059515..137059660,137163043..137163135,137286750..137286964,137289294..137289494,137662100..137662165,137663824..137663904,137796350..137796633,137985134..137986550)
location: region:133744336-137986550:1
so has part: feature:133744336-133745261:1:exon
so has part: feature:133745347-133745447:1:exon
so has part: feature:134176943-134177051:1:exon
so has part: feature:134383050-134383119:1:exon
so has part: feature:134777558-134777616:1:exon
so has part: feature:134992781-134992864:1:exon
so has part: feature:135109247-135109387:1:exon
so has part: feature:135207488-135207657:1:exon
so has part: feature:135468076-135468157:1:exon
so has part: feature:135599118-135599276:1:exon
so has part: feature:135836797-135836943:1:exon
so has part: feature:135943230-135943374:1:exon
so has part: feature:136019247-136019431:1:exon
so has part: feature:136185959-136186096:1:exon
so has part: feature:136302889-136303959:1:exon
so has part: feature:136304366-136304490:1:exon
so has part: feature:136304598-136304739:1:exon
so has part: feature:136461488-136461661:1:exon
so has part: feature:136487037-136487198:1:exon
so has part: feature:136687955-136688232:1:exon
so has part: feature:136830919-136831062:1:exon
so has part: feature:136897823-136898009:1:exon
so has part: feature:137059515-137059660:1:exon
so has part: feature:137163043-137163135:1:exon
so has part: feature:137286750-137286964:1:exon
so has part: feature:137289294-137289494:1:exon
so has part: feature:137662100-137662165:1:exon
so has part: feature:137663824-137663904:1:exon
so has part: feature:137796350-137796633:1:exon
so has part: feature:137985134-137986550:1:exon

position:137986550:1
position: 137986550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133744336-133745261:1:exon

position:133745261:1
position: 133745261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133745347-133745447:1:exon

position:133745347:1
position: 133745347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133745447:1
position: 133745447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:134176943-134177051:1:exon

position:134176943:1
position: 134176943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134177051:1
position: 134177051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:134383050-134383119:1:exon

position:134383050:1
position: 134383050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134383119:1
position: 134383119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:134777558-134777616:1:exon

position:134777558:1
position: 134777558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134777616:1
position: 134777616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:134992781-134992864:1:exon

position:134992781:1
position: 134992781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134992864:1
position: 134992864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:135109247-135109387:1:exon

position:135109247:1
position: 135109247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135109387:1
position: 135109387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:135207488-135207657:1:exon

position:135207488:1
position: 135207488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135207657:1
position: 135207657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:135468076-135468157:1:exon

position:135468076:1
position: 135468076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135468157:1
position: 135468157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:135599118-135599276:1:exon

position:135599118:1
position: 135599118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135599276:1
position: 135599276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:135836797-135836943:1:exon

position:135836797:1
position: 135836797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135836943:1
position: 135836943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:135943230-135943374:1:exon

position:135943230:1
position: 135943230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135943374:1
position: 135943374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:136019247-136019431:1:exon

position:136019247:1
position: 136019247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136019431:1
position: 136019431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:136185959-136186096:1:exon

position:136185959:1
position: 136185959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136186096:1
position: 136186096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:136302889-136303959:1:exon

position:136302889:1
position: 136302889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136303959:1
position: 136303959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:136304366-136304490:1:exon

position:136304366:1
position: 136304366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136304490:1
position: 136304490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:136304598-136304739:1:exon

position:136304598:1
position: 136304598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136304739:1
position: 136304739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:136461488-136461661:1:exon

position:136461488:1
position: 136461488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136461661:1
position: 136461661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:136487037-136487198:1:exon

position:136487037:1
position: 136487037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136487198:1
position: 136487198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:136687955-136688232:1:exon

position:136687955:1
position: 136687955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136688232:1
position: 136688232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:136830919-136831062:1:exon

position:136830919:1
position: 136830919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136831062:1
position: 136831062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:136897823-136898009:1:exon

position:136897823:1
position: 136897823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136898009:1
position: 136898009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:137059515-137059660:1:exon

position:137059515:1
position: 137059515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137059660:1
position: 137059660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:137163043-137163135:1:exon

position:137163043:1
position: 137163043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137163135:1
position: 137163135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:137286750-137286964:1:exon

position:137286750:1
position: 137286750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137286964:1
position: 137286964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:137289294-137289494:1:exon

position:137289294:1
position: 137289294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137289494:1
position: 137289494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:137662100-137662165:1:exon

position:137662100:1
position: 137662100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137662165:1
position: 137662165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:137663824-137663904:1:exon

position:137663824:1
position: 137663824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137663904:1
position: 137663904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:137796350-137796633:1:exon

position:137796350:1
position: 137796350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137796633:1
position: 137796633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:137985134-137986550:1:exon

position:137985134:1
position: 137985134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC88A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: CCDC88A
product: coiled-coil domain containing 88A, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055285.1
SIO_010081: CCDC88A
subclass of: SO_0000673
so part of: CCDC88A
location: join(133744337..133745261,133745347..133745447,134176943..134177051,134383050..134383119,134777558..134777616,134992781..134992864,135109247..135109387,135207488..135207657,135468076..135468157,135599118..135599276,135836797..135836943,135943230..135943374,136019247..136019431,136185959..136186096,136302889..136303959,136304366..136304490,136304598..136304739,136461488..136461661,136487037..136487198,136687955..136688232,136830919..136831062,136897823..136898009,137059515..137059660,137163043..137163135,137286750..137286964,137288164..137288244,137289294..137289494,137662100..137662165,137663824..137663904,137796350..137796633,137985134..137986550)
location: region:133744337-137986550:1
so has part: feature:133744337-133745261:1:exon
so has part: feature:133745347-133745447:1:exon
so has part: feature:134176943-134177051:1:exon
so has part: feature:134383050-134383119:1:exon
so has part: feature:134777558-134777616:1:exon
so has part: feature:134992781-134992864:1:exon
so has part: feature:135109247-135109387:1:exon
so has part: feature:135207488-135207657:1:exon
so has part: feature:135468076-135468157:1:exon
so has part: feature:135599118-135599276:1:exon
so has part: feature:135836797-135836943:1:exon
so has part: feature:135943230-135943374:1:exon
so has part: feature:136019247-136019431:1:exon
so has part: feature:136185959-136186096:1:exon
so has part: feature:136302889-136303959:1:exon
so has part: feature:136304366-136304490:1:exon
so has part: feature:136304598-136304739:1:exon
so has part: feature:136461488-136461661:1:exon
so has part: feature:136487037-136487198:1:exon
so has part: feature:136687955-136688232:1:exon
so has part: feature:136830919-136831062:1:exon
so has part: feature:136897823-136898009:1:exon
so has part: feature:137059515-137059660:1:exon
so has part: feature:137163043-137163135:1:exon
so has part: feature:137286750-137286964:1:exon
so has part: feature:137288164-137288244:1:exon
so has part: feature:137289294-137289494:1:exon
so has part: feature:137662100-137662165:1:exon
so has part: feature:137663824-137663904:1:exon
so has part: feature:137796350-137796633:1:exon
so has part: feature:137985134-137986550:1:exon

position:133744337:1
position: 133744337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133744337-133745261:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133745347-133745447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134176943-134177051:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134383050-134383119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134777558-134777616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134992781-134992864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135109247-135109387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135207488-135207657:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:135468076-135468157:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:135599118-135599276:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:135836797-135836943:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:135943230-135943374:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:136019247-136019431:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:136185959-136186096:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:136302889-136303959:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:136304366-136304490:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:136304598-136304739:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:136461488-136461661:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:136487037-136487198:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:136687955-136688232:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:136830919-136831062:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:136897823-136898009:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:137059515-137059660:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:137163043-137163135:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:137286750-137286964:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:137288164-137288244:1:exon

position:137288164:1
position: 137288164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137288244:1
position: 137288244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:137289294-137289494:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:137662100-137662165:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:137663824-137663904:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:137796350-137796633:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:137985134-137986550:1:exon

CCDC88A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: CCDC88A
product: coiled-coil domain containing 88A, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055303.1
SIO_010081: CCDC88A
subclass of: SO_0000673
so part of: CCDC88A
location: join(133744340..133745261,133745347..133745447,134176943..134177051,134383050..134383119,134777558..134777616,134992781..134992864,135109247..135109387,135207488..135207657,135468076..135468157,135599118..135599276,135836797..135836943,135943230..135943374,136019247..136019431,136185959..136186096,136302889..136303959,136304366..136304490,136304598..136304739,136461488..136461661,136487037..136487198,136687955..136688232,136830919..136831062,136897823..136898009,137059515..137059660,137163043..137163135,137286750..137286964,137288164..137288244,137289294..137289494,137662100..137662165,137663824..137663904,137796350..137796633,137985134..137985599,138115638..138115741,138116352..138117389)
location: region:133744340-138117389:1
so has part: feature:133744340-133745261:1:exon
so has part: feature:133745347-133745447:1:exon
so has part: feature:134176943-134177051:1:exon
so has part: feature:134383050-134383119:1:exon
so has part: feature:134777558-134777616:1:exon
so has part: feature:134992781-134992864:1:exon
so has part: feature:135109247-135109387:1:exon
so has part: feature:135207488-135207657:1:exon
so has part: feature:135468076-135468157:1:exon
so has part: feature:135599118-135599276:1:exon
so has part: feature:135836797-135836943:1:exon
so has part: feature:135943230-135943374:1:exon
so has part: feature:136019247-136019431:1:exon
so has part: feature:136185959-136186096:1:exon
so has part: feature:136302889-136303959:1:exon
so has part: feature:136304366-136304490:1:exon
so has part: feature:136304598-136304739:1:exon
so has part: feature:136461488-136461661:1:exon
so has part: feature:136487037-136487198:1:exon
so has part: feature:136687955-136688232:1:exon
so has part: feature:136830919-136831062:1:exon
so has part: feature:136897823-136898009:1:exon
so has part: feature:137059515-137059660:1:exon
so has part: feature:137163043-137163135:1:exon
so has part: feature:137286750-137286964:1:exon
so has part: feature:137288164-137288244:1:exon
so has part: feature:137289294-137289494:1:exon
so has part: feature:137662100-137662165:1:exon
so has part: feature:137663824-137663904:1:exon
so has part: feature:137796350-137796633:1:exon
so has part: feature:137985134-137985599:1:exon
so has part: feature:138115638-138115741:1:exon
so has part: feature:138116352-138117389:1:exon

position:133744340:1
position: 133744340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133744340-133745261:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133745347-133745447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134176943-134177051:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134383050-134383119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134777558-134777616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134992781-134992864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135109247-135109387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135207488-135207657:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:135468076-135468157:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:135599118-135599276:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:135836797-135836943:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:135943230-135943374:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:136019247-136019431:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:136185959-136186096:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:136302889-136303959:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:136304366-136304490:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:136304598-136304739:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:136461488-136461661:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:136487037-136487198:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:136687955-136688232:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:136830919-136831062:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:136897823-136898009:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:137059515-137059660:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:137163043-137163135:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:137286750-137286964:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:137288164-137288244:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:137289294-137289494:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:137662100-137662165:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:137663824-137663904:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:137796350-137796633:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:137985134-137985599:1:exon

position:137985599:1
position: 137985599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:138115638-138115741:1:exon

position:138115638:1
position: 138115638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138115741:1
position: 138115741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:138116352-138117389:1:exon

position:138116352:1
position: 138116352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC88A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: CCDC88A
product: coiled-coil domain containing 88A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_044055313.1
SIO_010081: CCDC88A
subclass of: SO_0000673
so part of: CCDC88A
location: join(133744340..133745261,133745347..133745447,134176943..134177051,134383050..134383119,134777558..134777616,134992781..134992864,135109247..135109387,135207488..135207657,135468076..135468157,135599118..135599276,135836797..135836943,135943230..135943374,136019247..136019431,136185959..136186096,136302889..136303959,136304366..136304490,136304598..136304739,136461488..136461661,136487037..136487198,136687955..136688232,136830919..136831062,136897823..136898009,137059515..137059660,137163043..137163135,137286750..137286964,137288164..137288244,137289294..137289494,137662100..137662165,137663824..137663904,137796350..137796633,137985134..137985599,138114909..138115631)
location: region:133744340-138115631:1
so has part: feature:133744340-133745261:1:exon
so has part: feature:133745347-133745447:1:exon
so has part: feature:134176943-134177051:1:exon
so has part: feature:134383050-134383119:1:exon
so has part: feature:134777558-134777616:1:exon
so has part: feature:134992781-134992864:1:exon
so has part: feature:135109247-135109387:1:exon
so has part: feature:135207488-135207657:1:exon
so has part: feature:135468076-135468157:1:exon
so has part: feature:135599118-135599276:1:exon
so has part: feature:135836797-135836943:1:exon
so has part: feature:135943230-135943374:1:exon
so has part: feature:136019247-136019431:1:exon
so has part: feature:136185959-136186096:1:exon
so has part: feature:136302889-136303959:1:exon
so has part: feature:136304366-136304490:1:exon
so has part: feature:136304598-136304739:1:exon
so has part: feature:136461488-136461661:1:exon
so has part: feature:136487037-136487198:1:exon
so has part: feature:136687955-136688232:1:exon
so has part: feature:136830919-136831062:1:exon
so has part: feature:136897823-136898009:1:exon
so has part: feature:137059515-137059660:1:exon
so has part: feature:137163043-137163135:1:exon
so has part: feature:137286750-137286964:1:exon
so has part: feature:137288164-137288244:1:exon
so has part: feature:137289294-137289494:1:exon
so has part: feature:137662100-137662165:1:exon
so has part: feature:137663824-137663904:1:exon
so has part: feature:137796350-137796633:1:exon
so has part: feature:137985134-137985599:1:exon
so has part: feature:138114909-138115631:1:exon

position:138115631:1
position: 138115631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133744340-133745261:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133745347-133745447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134176943-134177051:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134383050-134383119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134777558-134777616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134992781-134992864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135109247-135109387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135207488-135207657:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:135468076-135468157:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:135599118-135599276:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:135836797-135836943:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:135943230-135943374:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:136019247-136019431:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:136185959-136186096:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:136302889-136303959:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:136304366-136304490:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:136304598-136304739:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:136461488-136461661:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:136487037-136487198:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:136687955-136688232:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:136830919-136831062:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:136897823-136898009:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:137059515-137059660:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:137163043-137163135:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:137286750-137286964:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:137288164-137288244:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:137289294-137289494:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:137662100-137662165:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:137663824-137663904:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:137796350-137796633:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:137985134-137985599:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:138114909-138115631:1:exon

position:138114909:1
position: 138114909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC88A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: CCDC88A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: girdin isoform X3
translation: MDNEIFTPLLEQFMSSPLVVWVKTFGPLAGGNGGNLDEYVDLLDGIFLNEIMLQINPKATVQRVNKKVNNDALLRMQNLSILVHQIKSYYQETLQQLIVMSLPNILTLGRNPLSEQGVEEMKKMLLLLLGCAVQCEKKEEFIERIQSLDFETKASVASYIQEVTQNQENVLDLQWLELSDVSQEDLDSLCRNMAFHLKRVVDERDEYCETIVELSQERDYAQSLPSVQIPQSPSGSPSMRRTESRQHLSVELADAKAKIRRLRQELEEKTEHLVDSKQEVQQIEAEVKRLQQENMQLLGDARSARTYRDEIDALREKAIRVDKLECEVIRYKERLHDIEFYKARVEELKEDNQVLLETKAMLEEQLEGARARCDKLHELEKEGLQLKAKLHDMEMERDVERKKIEDLIEENLTLEMAQKQSMDESLHLGWELEQLSKTSEILEVPQKSLGHEVNELTSSRLLKLEMENQTLQKTVEDLQSTIDSAGAGDARILKMEKENQRLSKKLERLESELSHERESSQNIVKLSNDLMKEKAQLEKTVETLRENSERQIQVLEQENDHLNKTISALRQRSQVGAEARVKDIEKENKILHESIKETSSKLNKMEFEKKQLRKELELYKDKGERAEELEKEVHRLEMENEQLQKKITGLIITCEKVEVLEQEYSDLEVENKKLKKTLDNLSSLKFQAEALKKENAQLHEENLGLRRTVESLKSSSVKVAQLELENKELENEKEQLRKSLDLMKACFKKTERLEVSCQGLDIENQRLQKALENSNKKIQQLESELQDLETENHSLQKNLEELKISSKRLEQLEKENKVLEQETYQLEKDKKQLEKENRRLRQQAEIRDSTLEENNIKITNIERENKLLSKEISIFKDSCARMKELEKENKELVKQGTIDKKTLVTLREELVHEKLKTQQINNELDKLTHELEKIGLNKERLLHEQNNDDSRYKLLESKLESTLKKSLEIKEEKIAALEARLEESSNFNQQLRQELKTVKKNYEALKQRHEEEKMAQSTPPKFGEEIQVVRWEKESQEATRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQAQMLALQRQSASLQEQNTTLQTQNAKLQVENSTLNSQSASLMTQNSQLQIQQSTLENENESLLKEREELKLMYDSLVKDHEKLEGLHEHQAGEYESLITKHGSLKSVHKNLEVEHKDLEDRYNRLIQQKDKLEDLENVLKAEQARMLQESKNNETLASDHQKLCEENERLNNSYSQLLKENEGLQADHKNLKTLFNGARLEQTRLEADFSKLKEQYQQLDIASTKLNNQCELLSQLKGNLEEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQYKFYDPSPPRRRSNWIAVKMRKLIKPKKDANRERLRSLILSPSRSESGEGFLQLPHHDSQDSSSVGSSSVDDGHSFGTKKNSTALKRLPFMRNRPKDKDKTKALYRRSMSMNDLIQSMVLAGEWTGSSEHLDGPDDSSSGGRRKDMGTLAFSTTAIDFSTCNPSVGLRSKQSPKSKDNTSLEDVGVQSANDDSSTSSRASRPASLDSGRTSSRNSNNNATLHEVRETGTVITSHSRPQSNSSGEFGLPHDPEPCSNSNGPVQQPNTLTKKSIKLSPLVHRKVLGMVDSLGRQKVKAVSRGSEVVSLQQFLEESSKASTGQVCSASQESLLDEMLKKCSDSFALTKERTDEHSRSGNRLMRSLSGKATVDFSDCRPSKPEHSVRPSLRTTTATVKPTLAAQGKTLSLADRLDAVEAPQTTEYSSSATLPRASNVISTAEGTTRRTSIHDFMSKDSRQPVSVDPSPTKIGSSSQTTPNAEGVQESRKSEHRSSEQESS
SIO_010081: CCDC88A
subclass of: SO_0000673
so part of: CCDC88A
location: join(133745199..133745261,133745347..133745447,134176943..134177051,134383050..134383119,134777558..134777616,134992781..134992864,135109247..135109387,135207488..135207657,135468076..135468157,135599118..135599276,135836797..135836943,135943230..135943374,136019247..136019431,136185959..136186096,136302889..136303959,136304366..136304490,136304598..136304739,136461488..136461661,136487037..136487198,136687955..136688232,136830919..136831062,136897823..136898009,137059515..137059660,137163043..137163135,137286750..137286964,137288164..137288244,137289294..137289494,137662100..137662165,137663824..137663904,137796350..137796633,137985134..137985599,138115638..138115702)
location: region:133745199-138115702:1
so has part: feature:133745199-133745261:1:exon
so has part: feature:133745347-133745447:1:exon
so has part: feature:134176943-134177051:1:exon
so has part: feature:134383050-134383119:1:exon
so has part: feature:134777558-134777616:1:exon
so has part: feature:134992781-134992864:1:exon
so has part: feature:135109247-135109387:1:exon
so has part: feature:135207488-135207657:1:exon
so has part: feature:135468076-135468157:1:exon
so has part: feature:135599118-135599276:1:exon
so has part: feature:135836797-135836943:1:exon
so has part: feature:135943230-135943374:1:exon
so has part: feature:136019247-136019431:1:exon
so has part: feature:136185959-136186096:1:exon
so has part: feature:136302889-136303959:1:exon
so has part: feature:136304366-136304490:1:exon
so has part: feature:136304598-136304739:1:exon
so has part: feature:136461488-136461661:1:exon
so has part: feature:136487037-136487198:1:exon
so has part: feature:136687955-136688232:1:exon
so has part: feature:136830919-136831062:1:exon
so has part: feature:136897823-136898009:1:exon
so has part: feature:137059515-137059660:1:exon
so has part: feature:137163043-137163135:1:exon
so has part: feature:137286750-137286964:1:exon
so has part: feature:137288164-137288244:1:exon
so has part: feature:137289294-137289494:1:exon
so has part: feature:137662100-137662165:1:exon
so has part: feature:137663824-137663904:1:exon
so has part: feature:137796350-137796633:1:exon
so has part: feature:137985134-137985599:1:exon
so has part: feature:138115638-138115702:1:exon

XP_043911238.1
type: Protein
SIO_000068: ncbiprotein

position:133745199:1
position: 133745199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138115702:1
position: 138115702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133745199-133745261:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133745347-133745447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134176943-134177051:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134383050-134383119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134777558-134777616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134992781-134992864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135109247-135109387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135207488-135207657:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:135468076-135468157:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:135599118-135599276:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:135836797-135836943:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:135943230-135943374:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:136019247-136019431:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:136185959-136186096:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:136302889-136303959:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:136304366-136304490:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:136304598-136304739:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:136461488-136461661:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:136487037-136487198:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:136687955-136688232:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:136830919-136831062:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:136897823-136898009:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:137059515-137059660:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:137163043-137163135:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:137286750-137286964:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:137288164-137288244:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:137289294-137289494:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:137662100-137662165:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:137663824-137663904:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:137796350-137796633:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:137985134-137985599:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:138115638-138115702:1:exon

CCDC88A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: CCDC88A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: girdin isoform X4
translation: MDNEIFTPLLEQFMSSPLVVWVKTFGPLAGGNGGNLDEYVDLLDGIFLNEIMLQINPKATVQRVNKKVNNDALLRMQNLSILVHQIKSYYQETLQQLIVMSLPNILTLGRNPLSEQGVEEMKKMLLLLLGCAVQCEKKEEFIERIQSLDFETKASVASYIQEVTQNQENVLDLQWLELSDVSQEDLDSLCRNMAFHLKRVVDERDEYCETIVELSQERDYAQSLPSVQIPQSPSGSPSMRRTESRQHLSVELADAKAKIRRLRQELEEKTEHLVDSKQEVQQIEAEVKRLQQENMQLLGDARSARTYRDEIDALREKAIRVDKLECEVIRYKERLHDIEFYKARVEELKEDNQVLLETKAMLEEQLEGARARCDKLHELEKEGLQLKAKLHDMEMERDVERKKIEDLIEENLTLEMAQKQSMDESLHLGWELEQLSKTSEILEVPQKSLGHEVNELTSSRLLKLEMENQTLQKTVEDLQSTIDSAGAGDARILKMEKENQRLSKKLERLESELSHERESSQNIVKLSNDLMKEKAQLEKTVETLRENSERQIQVLEQENDHLNKTISALRQRSQVGAEARVKDIEKENKILHESIKETSSKLNKMEFEKKQLRKELELYKDKGERAEELEKEVHRLEMENEQLQKKITGLIITCEKVEVLEQEYSDLEVENKKLKKTLDNLSSLKFQAEALKKENAQLHEENLGLRRTVESLKSSSVKVAQLELENKELENEKEQLRKSLDLMKACFKKTERLEVSCQGLDIENQRLQKALENSNKKIQQLESELQDLETENHSLQKNLEELKISSKRLEQLEKENKVLEQETYQLEKDKKQLEKENRRLRQQAEIRDSTLEENNIKITNIERENKLLSKEISIFKDSCARMKELEKENKELVKQGTIDKKTLVTLREELVHEKLKTQQINNELDKLTHELEKIGLNKERLLHEQNNDDSRYKLLESKLESTLKKSLEIKEEKIAALEARLEESSNFNQQLRQELKTVKKNYEALKQRHEEEKMAQSTPPKFGEEIQVVRWEKESQEATRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQAQMLALQRQSASLQEQNTTLQTQNAKLQVENSTLNSQSASLMTQNSQLQIQQSTLENENESLLKEREELKLMYDSLVKDHEKLEGLHEHQAGEYESLITKHGSLKSVHKNLEVEHKDLEDRYNRLIQQKDKLEDLENVLKAEQARMLQESKNNETLASDHQKLCEENERLNNSYSQLLKENEGLQADHKNLKTLFNGARLEQTRLEADFSKLKEQYQQLDIASTKLNNQCELLSQLKGNLEEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQYKFYDPSPPRRRSNWIAVKMRKLIKPKKDANRERLRSLILSPSRSESGEGFLQLPHHDSQDSSSVGSSSVDDGHSFGTKKNSTALKRLPFMRNRPKDKDKTKALYRRSMSMNDLIQSMVLAGEWTGSSEHLDGPDDSSSGGRRKDMGTLAFSTTAIDFSTCNPSVGLRSKQSPKSKDNTSLEDVGVQSANDDSSTSSRASRPASLDSGRTSSRNSNNNATLHEVRETGTVITSHSRPQSNSSGEFGLPHDPEPCSNSNGPVQQPNTLTKKSIKLSPLVHRKVLGMVDSLGRQKVKAVSRGSEVVSLQQFLEESSKASTGQVCSASQESLLDEMLKKCSDSFALTKERTDEHSRSGNRLMRSLSGKATVDFSDCRPSKPEHSVRPSLRTTTATVKPTLAAQGKTLSLADRLDAVEAPQTTEYSSSATLPRASNVISTAEGTTRRTSIHDFMSKDSRQPVSVDPSPTKIGSSSQTTPKKLHFRSKEVSA
SIO_010081: CCDC88A
subclass of: SO_0000673
so part of: CCDC88A
location: join(133745199..133745261,133745347..133745447,134176943..134177051,134383050..134383119,134777558..134777616,134992781..134992864,135109247..135109387,135207488..135207657,135468076..135468157,135599118..135599276,135836797..135836943,135943230..135943374,136019247..136019431,136185959..136186096,136302889..136303959,136304366..136304490,136304598..136304739,136461488..136461661,136487037..136487198,136687955..136688232,136830919..136831062,136897823..136898009,137059515..137059660,137163043..137163135,137286750..137286964,137288164..137288244,137289294..137289494,137662100..137662165,137663824..137663904,137796350..137796633,137985134..137985599,138114909..138114946)
location: region:133745199-138114946:1
so has part: feature:133745199-133745261:1:exon
so has part: feature:133745347-133745447:1:exon
so has part: feature:134176943-134177051:1:exon
so has part: feature:134383050-134383119:1:exon
so has part: feature:134777558-134777616:1:exon
so has part: feature:134992781-134992864:1:exon
so has part: feature:135109247-135109387:1:exon
so has part: feature:135207488-135207657:1:exon
so has part: feature:135468076-135468157:1:exon
so has part: feature:135599118-135599276:1:exon
so has part: feature:135836797-135836943:1:exon
so has part: feature:135943230-135943374:1:exon
so has part: feature:136019247-136019431:1:exon
so has part: feature:136185959-136186096:1:exon
so has part: feature:136302889-136303959:1:exon
so has part: feature:136304366-136304490:1:exon
so has part: feature:136304598-136304739:1:exon
so has part: feature:136461488-136461661:1:exon
so has part: feature:136487037-136487198:1:exon
so has part: feature:136687955-136688232:1:exon
so has part: feature:136830919-136831062:1:exon
so has part: feature:136897823-136898009:1:exon
so has part: feature:137059515-137059660:1:exon
so has part: feature:137163043-137163135:1:exon
so has part: feature:137286750-137286964:1:exon
so has part: feature:137288164-137288244:1:exon
so has part: feature:137289294-137289494:1:exon
so has part: feature:137662100-137662165:1:exon
so has part: feature:137663824-137663904:1:exon
so has part: feature:137796350-137796633:1:exon
so has part: feature:137985134-137985599:1:exon
so has part: feature:138114909-138114946:1:exon

XP_043911248.1
type: Protein
SIO_000068: ncbiprotein

position:138114946:1
position: 138114946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133745199-133745261:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133745347-133745447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134176943-134177051:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134383050-134383119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134777558-134777616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134992781-134992864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135109247-135109387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135207488-135207657:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:135468076-135468157:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:135599118-135599276:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:135836797-135836943:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:135943230-135943374:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:136019247-136019431:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:136185959-136186096:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:136302889-136303959:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:136304366-136304490:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:136304598-136304739:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:136461488-136461661:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:136487037-136487198:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:136687955-136688232:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:136830919-136831062:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:136897823-136898009:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:137059515-137059660:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:137163043-137163135:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:137286750-137286964:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:137288164-137288244:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:137289294-137289494:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:137662100-137662165:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:137663824-137663904:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:137796350-137796633:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:137985134-137985599:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:138114909-138114946:1:exon

CCDC88A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: CCDC88A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: girdin isoform X1
translation: MDNEIFTPLLEQFMSSPLVVWVKTFGPLAGGNGGNLDEYVDLLDGIFLNEIMLQINPKATVQRVNKKVNNDALLRMQNLSILVHQIKSYYQETLQQLIVMSLPNILTLGRNPLSEQGVEEMKKMLLLLLGCAVQCEKKEEFIERIQSLDFETKASVASYIQEVTQNQENVLDLQWLELSDVSQEDLDSLCRNMAFHLKRVVDERDEYCETIVELSQERDYAQSLPSVQIPQSPSGSPSMRRTESRQHLSVELADAKAKIRRLRQELEEKTEHLVDSKQEVQQIEAEVKRLQQENMQLLGDARSARTYRDEIDALREKAIRVDKLECEVIRYKERLHDIEFYKARVEELKEDNQVLLETKAMLEEQLEGARARCDKLHELEKEGLQLKAKLHDMEMERDVERKKIEDLIEENLTLEMAQKQSMDESLHLGWELEQLSKTSEILEVPQKSLGHEVNELTSSRLLKLEMENQTLQKTVEDLQSTIDSAGAGDARILKMEKENQRLSKKLERLESELSHERESSQNIVKLSNDLMKEKAQLEKTVETLRENSERQIQVLEQENDHLNKTISALRQRSQVGAEARVKDIEKENKILHESIKETSSKLNKMEFEKKQLRKELELYKDKGERAEELEKEVHRLEMENEQLQKKITGLIITCEKVEVLEQEYSDLEVENKKLKKTLDNLSSLKFQAEALKKENAQLHEENLGLRRTVESLKSSSVKVAQLELENKELENEKEQLRKSLDLMKACFKKTERLEVSCQGLDIENQRLQKALENSNKKIQQLESELQDLETENHSLQKNLEELKISSKRLEQLEKENKVLEQETYQLEKDKKQLEKENRRLRQQAEIRDSTLEENNIKITNIERENKLLSKEISIFKDSCARMKELEKENKELVKQGTIDKKTLVTLREELVHEKLKTQQINNELDKLTHELEKIGLNKERLLHEQNNDDSRYKLLESKLESTLKKSLEIKEEKIAALEARLEESSNFNQQLRQELKTVKKNYEALKQRHEEEKMAQSTPPKFGEEIQVVRWEKESQEATRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQAQMLALQRQSASLQEQNTTLQTQNAKLQVENSTLNSQSASLMTQNSQLQIQQSTLENENESLLKEREELKLMYDSLVKDHEKLEGLHEHQAGEYESLITKHGSLKSVHKNLEVEHKDLEDRYNRLIQQKDKLEDLENVLKAEQARMLQESKNNETLASDHQKLCEENERLNNSYSQLLKENEGLQADHKNLKTLFNGARLEQTRLEADFSKLKEQYQQLDIASTKLNNQCELLSQLKGNLEEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQYKFYDPSPPRRRSNWIAVKMRKLIKPKKDANRERLRSLILSPSRSESGEGFLQLPHHDSQDSSSVGSSSVDDGHSFGTKKNSTALKRLPFMRNRPKDKDKTKALYRRSMSMNDLIQSMVLAGEWTGSSEHLDGPDDSSSGGRRKDMGTLAFSTTAIDFSTCNPSVGLRSKQSPKSKDNTSLEDVGVQSANDDSSTSSRASRPASLDSGRTSSRNSNNNATLHEVRETGTVITSHSRPQSNSSGEFGLPHDPEPCSNSNGPVQQPNTLTKKSIKLSPLVHRKVLGMVDSLGRQKVKAVSRGSEVVSLQQFLEESSKASTGQVCSASQESLLDEMLKKCSDSFALTKERTDEHSRSGNRLMRSLSGKATVDFSDCRPSKPEHSVRPSLRTTTATVKPTLAAQGKTLSLADRLDAVEAPQTTEYSSSATLPRASNVISTAEGTTRRTSIHDFMSKDSRQPVSVDPSPTKIGSSSQTTPSEYYAEHHHHLPHCVPHQNPLDSPPDKHFSNPAGHTQQQLYEPGSPKIGRESSAFGSGFVCDSVFANPVNVSSVHDDACLVHPYLSLNTKLVSNISAVPVRPVPRPPDVAFVSPMKTLVDYDEQSSMAQKSDMSGHCSVLSSGE…
SIO_010081: CCDC88A
subclass of: SO_0000673
so part of: CCDC88A
location: join(133745199..133745261,133745347..133745447,134176943..134177051,134383050..134383119,134777558..134777616,134992781..134992864,135109247..135109387,135207488..135207657,135468076..135468157,135599118..135599276,135836797..135836943,135943230..135943374,136019247..136019431,136185959..136186096,136302889..136303959,136304366..136304490,136304598..136304739,136461488..136461661,136487037..136487198,136687955..136688232,136830919..136831062,136897823..136898009,137059515..137059660,137163043..137163135,137286750..137286964,137288164..137288244,137289294..137289494,137662100..137662165,137663824..137663904,137796350..137796633,137985134..137986129)
location: region:133745199-137986129:1
so has part: feature:133745199-133745261:1:exon
so has part: feature:133745347-133745447:1:exon
so has part: feature:134176943-134177051:1:exon
so has part: feature:134383050-134383119:1:exon
so has part: feature:134777558-134777616:1:exon
so has part: feature:134992781-134992864:1:exon
so has part: feature:135109247-135109387:1:exon
so has part: feature:135207488-135207657:1:exon
so has part: feature:135468076-135468157:1:exon
so has part: feature:135599118-135599276:1:exon
so has part: feature:135836797-135836943:1:exon
so has part: feature:135943230-135943374:1:exon
so has part: feature:136019247-136019431:1:exon
so has part: feature:136185959-136186096:1:exon
so has part: feature:136302889-136303959:1:exon
so has part: feature:136304366-136304490:1:exon
so has part: feature:136304598-136304739:1:exon
so has part: feature:136461488-136461661:1:exon
so has part: feature:136487037-136487198:1:exon
so has part: feature:136687955-136688232:1:exon
so has part: feature:136830919-136831062:1:exon
so has part: feature:136897823-136898009:1:exon
so has part: feature:137059515-137059660:1:exon
so has part: feature:137163043-137163135:1:exon
so has part: feature:137286750-137286964:1:exon
so has part: feature:137288164-137288244:1:exon
so has part: feature:137289294-137289494:1:exon
so has part: feature:137662100-137662165:1:exon
so has part: feature:137663824-137663904:1:exon
so has part: feature:137796350-137796633:1:exon
so has part: feature:137985134-137986129:1:exon

XP_043911220.1
type: Protein
SIO_000068: ncbiprotein

position:137986129:1
position: 137986129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133745199-133745261:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133745347-133745447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134176943-134177051:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134383050-134383119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134777558-134777616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134992781-134992864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135109247-135109387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135207488-135207657:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:135468076-135468157:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:135599118-135599276:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:135836797-135836943:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:135943230-135943374:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:136019247-136019431:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:136185959-136186096:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:136302889-136303959:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:136304366-136304490:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:136304598-136304739:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:136461488-136461661:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:136487037-136487198:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:136687955-136688232:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:136830919-136831062:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:136897823-136898009:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:137059515-137059660:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:137163043-137163135:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:137286750-137286964:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:137288164-137288244:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:137289294-137289494:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:137662100-137662165:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:137663824-137663904:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:137796350-137796633:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:137985134-137986129:1:exon

CCDC88A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: CCDC88A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: girdin isoform X2
translation: MDNEIFTPLLEQFMSSPLVVWVKTFGPLAGGNGGNLDEYVDLLDGIFLNEIMLQINPKATVQRVNKKVNNDALLRMQNLSILVHQIKSYYQETLQQLIVMSLPNILTLGRNPLSEQGVEEMKKMLLLLLGCAVQCEKKEEFIERIQSLDFETKASVASYIQEVTQNQENVLDLQWLELSDVSQEDLDSLCRNMAFHLKRVVDERDEYCETIVELSQERDYAQSLPSVQIPQSPSGSPSMRRTESRQHLSVELADAKAKIRRLRQELEEKTEHLVDSKQEVQQIEAEVKRLQQENMQLLGDARSARTYRDEIDALREKAIRVDKLECEVIRYKERLHDIEFYKARVEELKEDNQVLLETKAMLEEQLEGARARCDKLHELEKEGLQLKAKLHDMEMERDVERKKIEDLIEENLTLEMAQKQSMDESLHLGWELEQLSKTSEILEVPQKSLGHEVNELTSSRLLKLEMENQTLQKTVEDLQSTIDSAGAGDARILKMEKENQRLSKKLERLESELSHERESSQNIVKLSNDLMKEKAQLEKTVETLRENSERQIQVLEQENDHLNKTISALRQRSQVGAEARVKDIEKENKILHESIKETSSKLNKMEFEKKQLRKELELYKDKGERAEELEKEVHRLEMENEQLQKKITGLIITCEKVEVLEQEYSDLEVENKKLKKTLDNLSSLKFQAEALKKENAQLHEENLGLRRTVESLKSSSVKVAQLELENKELENEKEQLRKSLDLMKACFKKTERLEVSCQGLDIENQRLQKALENSNKKIQQLESELQDLETENHSLQKNLEELKISSKRLEQLEKENKVLEQETYQLEKDKKQLEKENRRLRQQAEIRDSTLEENNIKITNIERENKLLSKEISIFKDSCARMKELEKENKELVKQGTIDKKTLVTLREELVHEKLKTQQINNELDKLTHELEKIGLNKERLLHEQNNDDSRYKLLESKLESTLKKSLEIKEEKIAALEARLEESSNFNQQLRQELKTVKKNYEALKQRHEEEKMAQSTPPKFGEEIQVVRWEKESQEATRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQAQMLALQRQSASLQEQNTTLQTQNAKLQVENSTLNSQSASLMTQNSQLQIQQSTLENENESLLKEREELKLMYDSLVKDHEKLEGLHEHQAGEYESLITKHGSLKSVHKNLEVEHKDLEDRYNRLIQQKDKLEDLENVLKAEQARMLQESKNNETLASDHQKLCEENERLNNSYSQLLKENEGLQADHKNLKTLFNGARLEQTRLEADFSKLKEQYQQLDIASTKLNNQCELLSQLKGNLEEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQYKFYDPSPPRRRSNWIAVKMRKLIKPKKDANRERLRSLILSPSRSESGEGFLQLPHHDSQDSSSVGSSSVDDGHSFGTKKNSTMNDLIQSMVLAGEWTGSSEHLDGPDDSSSGGRRKDMGTLAFSTTAIDFSTCNPSVGLRSKQSPKSKDNTSLEDVGVQSANDDSSTSSRASRPASLDSGRTSSRNSNNNATLHEVRETGTVITSHSRPQSNSSGEFGLPHDPEPCSNSNGPVQQPNTLTKKSIKLSPLVHRKVLGMVDSLGRQKVKAVSRGSEVVSLQQFLEESSKASTGQVCSASQESLLDEMLKKCSDSFALTKERTDEHSRSGNRLMRSLSGKATVDFSDCRPSKPEHSVRPSLRTTTATVKPTLAAQGKTLSLADRLDAVEAPQTTEYSSSATLPRASNVISTAEGTTRRTSIHDFMSKDSRQPVSVDPSPTKIGSSSQTTPSEYYAEHHHHLPHCVPHQNPLDSPPDKHFSNPAGHTQQQLYEPGSPKIGRESSAFGSGFVCDSVFANPVNVSSVHDDACLVHPYLSLNTKLVSNISAVPVRPVPRPPDVAFVSPMKTLVDYDEQSSMAQKSDMSGHCSVLSSGESSTAETTTSVDAGHLSVVSEDNQSVWY…
SIO_010081: CCDC88A
subclass of: SO_0000673
so part of: CCDC88A
location: join(133745199..133745261,133745347..133745447,134176943..134177051,134383050..134383119,134777558..134777616,134992781..134992864,135109247..135109387,135207488..135207657,135468076..135468157,135599118..135599276,135836797..135836943,135943230..135943374,136019247..136019431,136185959..136186096,136302889..136303959,136304366..136304490,136304598..136304739,136461488..136461661,136487037..136487198,136687955..136688232,136830919..136831062,136897823..136898009,137059515..137059660,137163043..137163135,137286750..137286964,137289294..137289494,137662100..137662165,137663824..137663904,137796350..137796633,137985134..137986129)
location: region:133745199-137986129:1
so has part: feature:133745199-133745261:1:exon
so has part: feature:133745347-133745447:1:exon
so has part: feature:134176943-134177051:1:exon
so has part: feature:134383050-134383119:1:exon
so has part: feature:134777558-134777616:1:exon
so has part: feature:134992781-134992864:1:exon
so has part: feature:135109247-135109387:1:exon
so has part: feature:135207488-135207657:1:exon
so has part: feature:135468076-135468157:1:exon
so has part: feature:135599118-135599276:1:exon
so has part: feature:135836797-135836943:1:exon
so has part: feature:135943230-135943374:1:exon
so has part: feature:136019247-136019431:1:exon
so has part: feature:136185959-136186096:1:exon
so has part: feature:136302889-136303959:1:exon
so has part: feature:136304366-136304490:1:exon
so has part: feature:136304598-136304739:1:exon
so has part: feature:136461488-136461661:1:exon
so has part: feature:136487037-136487198:1:exon
so has part: feature:136687955-136688232:1:exon
so has part: feature:136830919-136831062:1:exon
so has part: feature:136897823-136898009:1:exon
so has part: feature:137059515-137059660:1:exon
so has part: feature:137163043-137163135:1:exon
so has part: feature:137286750-137286964:1:exon
so has part: feature:137289294-137289494:1:exon
so has part: feature:137662100-137662165:1:exon
so has part: feature:137663824-137663904:1:exon
so has part: feature:137796350-137796633:1:exon
so has part: feature:137985134-137986129:1:exon

XP_043911229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133745199-133745261:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133745347-133745447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134176943-134177051:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134383050-134383119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134777558-134777616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134992781-134992864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135109247-135109387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135207488-135207657:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:135468076-135468157:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:135599118-135599276:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:135836797-135836943:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:135943230-135943374:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:136019247-136019431:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:136185959-136186096:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:136302889-136303959:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:136304366-136304490:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:136304598-136304739:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:136461488-136461661:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:136487037-136487198:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:136687955-136688232:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:136830919-136831062:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:136897823-136898009:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:137059515-137059660:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:137163043-137163135:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:137286750-137286964:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:137289294-137289494:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:137662100-137662165:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:137663824-137663904:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:137796350-137796633:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:137985134-137986129:1:exon

LOC122792337
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122792337
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(138330074..138330555)
location: region:138330074-138330555:-1
so has part: feature:138330074-138330555:-1:exon
subclass of: SO_0000010

122792337
type: Gene
SIO_000068: ncbigene

position:138330074:-1
position: 138330074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138330555:-1
position: 138330555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138330074-138330555:-1:exon

LOC122792337
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: LOC122792337
product: prolyl-tRNA synthetase associated domain-containing protein 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044060136.1
SIO_010081: LOC122792337
subclass of: SO_0000673
so part of: LOC122792337
location: complement(138330074..138330555)
location: region:138330074-138330555:-1
so has part: feature:138330074-138330555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138330074-138330555:-1:exon

LOC122792337
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: LOC122792337
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prolyl-tRNA synthetase associated domain-containing protein 1-like
translation: MWKIEVLTEFILLFQVFTVEEMMPHVQHLSGALSKNLFLKDKKKKSLWLVTVLHDREINLNELAKKLGVSSGNLRFADEAIMLEKLRVGQGCVTPFALFCDEKKEVKFVLDSSFIDGGYEKIYFHPMTNAATMGLTPDDFLKFIKKTGHEIVSIKFD
SIO_010081: LOC122792337
subclass of: SO_0000673
so part of: LOC122792337
location: complement(138330082..138330555)
location: region:138330082-138330555:-1
so has part: feature:138330082-138330555:-1:exon

XP_043916071.1
type: Protein
SIO_000068: ncbiprotein

position:138330082:-1
position: 138330082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138330082-138330555:-1:exon

LOC122792500
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122792500
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 147045448..147045638
location: region:147045448-147045638:1
so has part: feature:147045448-147045638:1:exon
subclass of: SO_0000623

122792500
type: Gene
SIO_000068: ncbigene

position:147045448:1
position: 147045448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147045638:1
position: 147045638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147045448-147045638:1:exon

LOC122792500
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7888
nc RNA class: snRNA
gene: LOC122792500
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006363326.1
SIO_010081: LOC122792500
subclass of: SO_0000673
so part of: LOC122792500
location: 147045448..147045638
location: region:147045448-147045638:1
so has part: feature:147045448-147045638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147045448-147045638:1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 149571636..149571707
location: region:149571636-149571707:1
so has part: feature:149571636-149571707:1:exon
subclass of: SO_0000663

122792649
type: Gene
SIO_000068: ncbigene

position:149571636:1
position: 149571636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149571707:1
position: 149571707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149571636-149571707:1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:149571669..149571671,aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: 149571636..149571707
location: region:149571636-149571707:1
so has part: feature:149571636-149571707:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:149571636-149571707:1:exon

LOC122792456
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122792456
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 153565887..153640486
location: region:153565887-153640486:1
so has part: feature:153565887-153640486:1:exon
subclass of: SO_0000011

122792456
type: Gene
SIO_000068: ncbigene

position:153565887:1
position: 153565887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153640486:1
position: 153640486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153565887-153640486:1:exon

LOC122792456
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7888
nc RNA class: lncRNA
gene: LOC122792456
product: uncharacterized LOC122792456
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_006363308.1
SIO_010081: LOC122792456
subclass of: SO_0000673
so part of: LOC122792456
location: join(153565887..153565954,153601834..153601908,153640419..153640486)
location: region:153565887-153640486:1
so has part: feature:153565887-153565954:1:exon
so has part: feature:153601834-153601908:1:exon
so has part: feature:153640419-153640486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153565887-153565954:1:exon

position:153565954:1
position: 153565954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:153601834-153601908:1:exon

position:153601834:1
position: 153601834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153601908:1
position: 153601908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:153640419-153640486:1:exon

position:153640419:1
position: 153640419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122792338
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122792338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 153872103..154094859
location: region:153872103-154094859:1
so has part: feature:153872103-154094859:1:exon
subclass of: SO_0000010

122792338
type: Gene
SIO_000068: ncbigene

position:153872103:1
position: 153872103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154094859:1
position: 154094859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153872103-154094859:1:exon

LOC122792338
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: LOC122792338
product: follicle-stimulating hormone receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_044060137.1
SIO_010081: LOC122792338
subclass of: SO_0000673
so part of: LOC122792338
location: join(153872103..153872240,153872411..153872577,153912188..153912256,153912345..153912419,153956708..153956890,154093194..154094859)
location: region:153872103-154094859:1
so has part: feature:153872103-153872240:1:exon
so has part: feature:153872411-153872577:1:exon
so has part: feature:153912188-153912256:1:exon
so has part: feature:153912345-153912419:1:exon
so has part: feature:153956708-153956890:1:exon
so has part: feature:154093194-154094859:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153872103-153872240:1:exon

position:153872240:1
position: 153872240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:153872411-153872577:1:exon

position:153872411:1
position: 153872411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153872577:1
position: 153872577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:153912188-153912256:1:exon

position:153912188:1
position: 153912188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153912256:1
position: 153912256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:153912345-153912419:1:exon

position:153912345:1
position: 153912345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153912419:1
position: 153912419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:153956708-153956890:1:exon

position:153956708:1
position: 153956708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153956890:1
position: 153956890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:154093194-154094859:1:exon

position:154093194:1
position: 154093194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC122792338
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: LOC122792338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: follicle-stimulating hormone receptor-like
translation: MDIHEGKMQHISSVIKINGKQGILRYWGQTKTFFCGGDNHLVPEEQSKYYGQITEKENITSMEKDNGSDLGIVYKEKVLQCKIKTGMQPQEMKKGKRKNCIQRLCKNGLEEIQSHAFNGTNLSELDLKDNKNLKHIHNEAFMGATGPQTLDISRTQISYLPTYGLNKIVILRAMSVYNLKKLPSLENFSELLVANLTYPSHCCAFANWKKMLISLPICNQMPMKLEEPKQQKNSLEGDLDNGPHFHVMVTYQESDYDYDLCSERSMECSPKPDEFNPCEDIMGHDILRILIWFINILALVGNTLVLVVLLTSRYKCTVPRFLMCNLAFADLCMGVYLLLIASVDIHTKSQYYNYAIDWQTGPGCRAAGFFTVFASELSVYTLTVITIERWHTITYAMQLDRKVKFVHATFIMIGGWVFAFTVAFLPLVGVSSYMKVSICLPMDIESQLSQAYIIVILLLNVLAFILICACYIKIYLTVRNPHFVSTNSDTKIAKRMAVLIFTDFLCMAPISFFAISASLKVPLITVSKSKILLVLFYPINSCANPFLYAIFTESFRRDFFILLSRFGYCKTQAQIYRTETTSSVLNSHMRNGSYAGAAKANESTAHVLVPLNSMG
SIO_010081: LOC122792338
subclass of: SO_0000673
so part of: LOC122792338
location: join(153872103..153872240,153872411..153872577,153912188..153912256,153912345..153912419,153956708..153956890,154093194..154094409)
location: region:153872103-154094409:1
so has part: feature:153872103-153872240:1:exon
so has part: feature:153872411-153872577:1:exon
so has part: feature:153912188-153912256:1:exon
so has part: feature:153912345-153912419:1:exon
so has part: feature:153956708-153956890:1:exon
so has part: feature:154093194-154094409:1:exon

XP_043916072.1
type: Protein
SIO_000068: ncbiprotein

position:154094409:1
position: 154094409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153872103-153872240:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:153872411-153872577:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153912188-153912256:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153912345-153912419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153956708-153956890:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154093194-154094409:1:exon

LOC122792498
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122792498
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(155237027..155237145)
location: region:155237027-155237145:-1
so has part: feature:155237027-155237145:-1:exon

122792498
type: Gene
SIO_000068: ncbigene

position:155237027:-1
position: 155237027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155237145:-1
position: 155237145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155237027-155237145:-1:exon

LOC122792498
type: Exon
subclass of: SO_0000147
RO_0002162: 7888
gene: LOC122792498
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC122792498
subclass of: SO_0000673
so part of: LOC122792498
location: complement(155237027..155237145)
location: region:155237027-155237145:-1
so has part: feature:155237027-155237145:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155237027-155237145:-1:exon

LOC122788261
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122788261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(155908864..157324968)
location: region:155908864-157324968:-1
so has part: feature:155908864-157324968:-1:exon
subclass of: SO_0000010

122788261
type: Gene
SIO_000068: ncbigene

position:155908864:-1
position: 155908864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157324968:-1
position: 157324968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155908864-157324968:-1:exon

LOC122788261
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: LOC122788261
product: stonin-1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055325.1
SIO_010081: LOC122788261
subclass of: SO_0000673
so part of: LOC122788261
location: complement(join(155908864..155909636,156071658..156071747,156147570..156147794,156192075..156192730,156301414..156301497,156362542..156362607,156487799..156487919,156584172..156584273,156837403..156837599,156896168..156898219,157324732..157324968))
location: region:155908864-157324968:-1
so has part: feature:157324732-157324968:-1:exon
so has part: feature:156896168-156898219:-1:exon
so has part: feature:156837403-156837599:-1:exon
so has part: feature:156584172-156584273:-1:exon
so has part: feature:156487799-156487919:-1:exon
so has part: feature:156362542-156362607:-1:exon
so has part: feature:156301414-156301497:-1:exon
so has part: feature:156192075-156192730:-1:exon
so has part: feature:156147570-156147794:-1:exon
so has part: feature:156071658-156071747:-1:exon
so has part: feature:155908864-155909636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157324732-157324968:-1:exon

position:157324732:-1
position: 157324732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:156896168-156898219:-1:exon

position:156896168:-1
position: 156896168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156898219:-1
position: 156898219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:156837403-156837599:-1:exon

position:156837403:-1
position: 156837403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156837599:-1
position: 156837599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:156584172-156584273:-1:exon

position:156584172:-1
position: 156584172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156584273:-1
position: 156584273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:156487799-156487919:-1:exon

position:156487799:-1
position: 156487799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156487919:-1
position: 156487919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:156362542-156362607:-1:exon

position:156362542:-1
position: 156362542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156362607:-1
position: 156362607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:156301414-156301497:-1:exon

position:156301414:-1
position: 156301414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156301497:-1
position: 156301497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:156192075-156192730:-1:exon

position:156192075:-1
position: 156192075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156192730:-1
position: 156192730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:156147570-156147794:-1:exon

position:156147570:-1
position: 156147570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156147794:-1
position: 156147794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:156071658-156071747:-1:exon

position:156071658:-1
position: 156071658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156071747:-1
position: 156071747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:155908864-155909636:-1:exon

position:155909636:-1
position: 155909636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC122788261
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: LOC122788261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stonin-1-like
translation: MYIIMSFTNPANWVTFEDDSTFQSVQKSLSPAKNPTVPRPNVLKLNLSAILESSSDSSSSANSTPLSSPVTDFPIIPGPPYNSPLSSPMKDHQGGTCIPVLGSDIFGAFSGKLQRTSTFLPSPGTDCTPSPMCVNSTSDETSFNPLFLRLPPPTTPVKLNHSSTPSKRNCILNVGNSPVSNLNKGLSEDNGHSSAFNTDRCAMGTLPSDSGAHVLMKDSANDPCQFKNHELNGSDTIPASACLSYNSGKLEHFSTEEMLRRSFSRNADIKPNNIPPFVTDNLFKSQNRDGWPFMLRIPEKKNMMSSRQWGPIYLRVSSGGILQMYYEKGLEKPFKEFQLQIYHRLSESKLEHFNDSGKIHTVKIENVTYTEKRKYHPKSEVVHEAEFEQLLKLGTTDYNDFKDFITTVEEELLRLPPLSKQRKNYEEPAMTLEILDNFWGKITRTEGKLVESSVLTQLYCVSFLNGNPECFLTLNDIILHRNNESYFEKGIDDQWIEINDYCFQKCVKEEEFKNTRIIKFVPPDACKIELMRFRTHYSSSDIPISIKAAVSVQGAYTELQAFLNMSSTFIDPAVPNVSKYCENVMIQFPVPDDWVKAFRTVNLLRQRSLKAKMNRSTCLGSLNDMGPEPVVQVTTGTAKYESAYKAIVWRIEKLPDKNSDHPHSFSCKLELGSDQEIPSDWYPFVTVEFDMPDTHASGTKVKSLGTESDFQPQKHIFQKARYHCQPKLYQSVIDDVIERVHDLFLDEGADEQVLKELKKRWESKVLQSKAIEGFFRESCSQQFVLQLPQSLRQTLPGSTASIVIPAGRTIQNFTADVVSTPSASATFTLPAGISYPIQVPSGVTLQTASGHLYKVNVPVMVSQAPGGYRILQHPVRHILQQHNRSTGLNILNTHQAPLHATVIHNLSSQQPRIVTHQPPAPRPVVQDKELLVYHNAQNISGVNYSSLQQAAGPQQQQSVMTNLLIQQNGTTDNYGYESMHSLPLNDQLSAFSQGCAQGQDITDLNELQQNLQDKVSSDYTSTLQQSVADDIVELILLDGHTGETSTAELTDPVQSDLQQHIEQELSREEHDTGIGIDDIIQIDGTYDSSSDDEAEFVQDVEDSEFLGIINSEDLKALEEGDDSSSSDDLSSSSEDDNESEVEEDPLNSGDDVSEQEVPDLFDTDNVIVCQYDKIHRSKNKWKFYLKDGVMSFGGKDYIFSKAIGEAEW
SIO_010081: LOC122788261
subclass of: SO_0000673
so part of: LOC122788261
location: complement(join(155909529..155909636,156071658..156071747,156147570..156147794,156192075..156192730,156301414..156301497,156362542..156362607,156487799..156487919,156584172..156584273,156837403..156837599,156896168..156898145))
location: region:155909529-156898145:-1
so has part: feature:156896168-156898145:-1:exon
so has part: feature:156837403-156837599:-1:exon
so has part: feature:156584172-156584273:-1:exon
so has part: feature:156487799-156487919:-1:exon
so has part: feature:156362542-156362607:-1:exon
so has part: feature:156301414-156301497:-1:exon
so has part: feature:156192075-156192730:-1:exon
so has part: feature:156147570-156147794:-1:exon
so has part: feature:156071658-156071747:-1:exon
so has part: feature:155909529-155909636:-1:exon

XP_043911260.1
type: Protein
SIO_000068: ncbiprotein

position:155909529:-1
position: 155909529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156898145:-1
position: 156898145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156896168-156898145:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156837403-156837599:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156584172-156584273:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156487799-156487919:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156362542-156362607:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:156301414-156301497:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156192075-156192730:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156147570-156147794:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:156071658-156071747:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:155909529-155909636:-1:exon

PPP1R21
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: PPP1R21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(157606585..158776257)
location: region:157606585-158776257:-1
so has part: feature:157606585-158776257:-1:exon
subclass of: SO_0000010

122788270
type: Gene
SIO_000068: ncbigene

position:157606585:-1
position: 157606585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158776257:-1
position: 158776257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157606585-158776257:-1:exon

PPP1R21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: PPP1R21
product: protein phosphatase 1 regulatory subunit 21, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055342.1
SIO_010081: PPP1R21
subclass of: SO_0000673
so part of: PPP1R21
location: complement(join(157606585..157606969,157645748..157645876,157735457..157735555,157990499..157990612,157990721..157990750,158085930..158086193,158148694..158148786,158222652..158222804,158330902..158331029,158382893..158382985,158408259..158408395,158486833..158486921,158487023..158487124,158503453..158503602,158503752..158503804,158508355..158508449,158529999..158530057,158530507..158530671,158562516..158562617,158676289..158676435,158723824..158723892,158776156..158776257))
location: region:157606585-158776257:-1
so has part: feature:158776156-158776257:-1:exon
so has part: feature:158723824-158723892:-1:exon
so has part: feature:158676289-158676435:-1:exon
so has part: feature:158562516-158562617:-1:exon
so has part: feature:158530507-158530671:-1:exon
so has part: feature:158529999-158530057:-1:exon
so has part: feature:158508355-158508449:-1:exon
so has part: feature:158503752-158503804:-1:exon
so has part: feature:158503453-158503602:-1:exon
so has part: feature:158487023-158487124:-1:exon
so has part: feature:158486833-158486921:-1:exon
so has part: feature:158408259-158408395:-1:exon
so has part: feature:158382893-158382985:-1:exon
so has part: feature:158330902-158331029:-1:exon
so has part: feature:158222652-158222804:-1:exon
so has part: feature:158148694-158148786:-1:exon
so has part: feature:158085930-158086193:-1:exon
so has part: feature:157990721-157990750:-1:exon
so has part: feature:157990499-157990612:-1:exon
so has part: feature:157735457-157735555:-1:exon
so has part: feature:157645748-157645876:-1:exon
so has part: feature:157606585-157606969:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:158776156-158776257:-1:exon

position:158776156:-1
position: 158776156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158723824-158723892:-1:exon

position:158723824:-1
position: 158723824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158723892:-1
position: 158723892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:158676289-158676435:-1:exon

position:158676289:-1
position: 158676289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158676435:-1
position: 158676435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:158562516-158562617:-1:exon

position:158562516:-1
position: 158562516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158562617:-1
position: 158562617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:158530507-158530671:-1:exon

position:158530507:-1
position: 158530507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158530671:-1
position: 158530671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:158529999-158530057:-1:exon

position:158529999:-1
position: 158529999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158530057:-1
position: 158530057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:158508355-158508449:-1:exon

position:158508355:-1
position: 158508355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158508449:-1
position: 158508449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:158503752-158503804:-1:exon

position:158503752:-1
position: 158503752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158503804:-1
position: 158503804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:158503453-158503602:-1:exon

position:158503453:-1
position: 158503453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158503602:-1
position: 158503602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:158487023-158487124:-1:exon

position:158487023:-1
position: 158487023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158487124:-1
position: 158487124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:158486833-158486921:-1:exon

position:158486833:-1
position: 158486833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158486921:-1
position: 158486921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:158408259-158408395:-1:exon

position:158408259:-1
position: 158408259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158408395:-1
position: 158408395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:158382893-158382985:-1:exon

position:158382893:-1
position: 158382893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158382985:-1
position: 158382985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:158330902-158331029:-1:exon

position:158330902:-1
position: 158330902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158331029:-1
position: 158331029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:158222652-158222804:-1:exon

position:158222652:-1
position: 158222652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158222804:-1
position: 158222804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:158148694-158148786:-1:exon

position:158148694:-1
position: 158148694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158148786:-1
position: 158148786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:158085930-158086193:-1:exon

position:158085930:-1
position: 158085930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158086193:-1
position: 158086193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:157990721-157990750:-1:exon

position:157990721:-1
position: 157990721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157990750:-1
position: 157990750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:157990499-157990612:-1:exon

position:157990499:-1
position: 157990499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157990612:-1
position: 157990612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:157735457-157735555:-1:exon

position:157735457:-1
position: 157735457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157735555:-1
position: 157735555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:157645748-157645876:-1:exon

position:157645748:-1
position: 157645748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157645876:-1
position: 157645876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:157606585-157606969:-1:exon

position:157606969:-1
position: 157606969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP1R21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: PPP1R21
product: protein phosphatase 1 regulatory subunit 21, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055334.1
SIO_010081: PPP1R21
subclass of: SO_0000673
so part of: PPP1R21
location: complement(join(157606585..157606969,157645748..157645876,157735457..157735555,157990499..157990612,157990721..157990750,158085930..158086193,158148694..158148786,158222652..158222804,158330902..158331029,158382893..158382985,158408259..158408395,158486833..158486921,158487023..158487124,158503453..158503602,158503752..158503804,158508355..158508449,158529999..158530057,158530507..158530671,158562516..158562617,158634925..158634957,158676289..158676435,158723824..158723892,158776156..158776257))
location: region:157606585-158776257:-1
so has part: feature:158776156-158776257:-1:exon
so has part: feature:158723824-158723892:-1:exon
so has part: feature:158676289-158676435:-1:exon
so has part: feature:158634925-158634957:-1:exon
so has part: feature:158562516-158562617:-1:exon
so has part: feature:158530507-158530671:-1:exon
so has part: feature:158529999-158530057:-1:exon
so has part: feature:158508355-158508449:-1:exon
so has part: feature:158503752-158503804:-1:exon
so has part: feature:158503453-158503602:-1:exon
so has part: feature:158487023-158487124:-1:exon
so has part: feature:158486833-158486921:-1:exon
so has part: feature:158408259-158408395:-1:exon
so has part: feature:158382893-158382985:-1:exon
so has part: feature:158330902-158331029:-1:exon
so has part: feature:158222652-158222804:-1:exon
so has part: feature:158148694-158148786:-1:exon
so has part: feature:158085930-158086193:-1:exon
so has part: feature:157990721-157990750:-1:exon
so has part: feature:157990499-157990612:-1:exon
so has part: feature:157735457-157735555:-1:exon
so has part: feature:157645748-157645876:-1:exon
so has part: feature:157606585-157606969:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:158776156-158776257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158723824-158723892:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158676289-158676435:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158634925-158634957:-1:exon

position:158634925:-1
position: 158634925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158634957:-1
position: 158634957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:158562516-158562617:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158530507-158530671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:158529999-158530057:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158508355-158508449:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:158503752-158503804:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:158503453-158503602:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:158487023-158487124:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:158486833-158486921:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:158408259-158408395:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:158382893-158382985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:158330902-158331029:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:158222652-158222804:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:158148694-158148786:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:158085930-158086193:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:157990721-157990750:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:157990499-157990612:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:157735457-157735555:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:157645748-157645876:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:157606585-157606969:-1:exon

PPP1R21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: PPP1R21
product: protein phosphatase 1 regulatory subunit 21, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055351.1
SIO_010081: PPP1R21
subclass of: SO_0000673
so part of: PPP1R21
location: complement(join(157606585..157606969,157645748..157645876,157735457..157735555,157990499..157990612,157990721..157990750,158085930..158086193,158148694..158148786,158222652..158222804,158330902..158331029,158382893..158382985,158408259..158408395,158486833..158486921,158487023..158487124,158503453..158503602,158503752..158503804,158508355..158508449,158529999..158530057,158530507..158530671,158562516..158562617,158634925..158634957,158676289..158676435,158723824..158723892,158775769..158775990))
location: region:157606585-158775990:-1
so has part: feature:158775769-158775990:-1:exon
so has part: feature:158723824-158723892:-1:exon
so has part: feature:158676289-158676435:-1:exon
so has part: feature:158634925-158634957:-1:exon
so has part: feature:158562516-158562617:-1:exon
so has part: feature:158530507-158530671:-1:exon
so has part: feature:158529999-158530057:-1:exon
so has part: feature:158508355-158508449:-1:exon
so has part: feature:158503752-158503804:-1:exon
so has part: feature:158503453-158503602:-1:exon
so has part: feature:158487023-158487124:-1:exon
so has part: feature:158486833-158486921:-1:exon
so has part: feature:158408259-158408395:-1:exon
so has part: feature:158382893-158382985:-1:exon
so has part: feature:158330902-158331029:-1:exon
so has part: feature:158222652-158222804:-1:exon
so has part: feature:158148694-158148786:-1:exon
so has part: feature:158085930-158086193:-1:exon
so has part: feature:157990721-157990750:-1:exon
so has part: feature:157990499-157990612:-1:exon
so has part: feature:157735457-157735555:-1:exon
so has part: feature:157645748-157645876:-1:exon
so has part: feature:157606585-157606969:-1:exon

position:158775990:-1
position: 158775990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158775769-158775990:-1:exon

position:158775769:-1
position: 158775769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158723824-158723892:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158676289-158676435:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158634925-158634957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:158562516-158562617:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158530507-158530671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:158529999-158530057:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158508355-158508449:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:158503752-158503804:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:158503453-158503602:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:158487023-158487124:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:158486833-158486921:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:158408259-158408395:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:158382893-158382985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:158330902-158331029:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:158222652-158222804:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:158148694-158148786:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:158085930-158086193:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:157990721-157990750:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:157990499-157990612:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:157735457-157735555:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:157645748-157645876:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:157606585-157606969:-1:exon

PPP1R21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: PPP1R21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 21 isoform X2
translation: MAADLQGKYQKLAQEYSKLRAQNQVLKKGVVDEQANSAALKEQLKMKEQSLRKLQQEMDSLTFRNQQLAKRVELLQEELTAMEAKGKKNKKSSDSPPQLRQDQQNVFDEDLQKKIEENERLHMQFFEADEQHKQIETELRKRLAVLERETSEHQAVVNSLTQKYTETVEKLQNDKAKLEVKSQALEREAKDCRLRTEECQEQLKTLHTDLSSKLADCTGIIQEKIPFNDTKCCHLSGLNVLPHNRRRQLKARDIAGQALAFLQDLVASLLNFHTYMEQRVQIFPIDSAIDTISPLNQKFSQHLHENAVYVRPLEEGMIHLFESITEDTVTILETAVQLKEFSDHLTSYTCFLNKILPYQLKSLEEECESSTCTSALMSKNMELHKDFKQMTVMFKKVQTYISLLALPSTRPEVLPPSNFSAVFTQLAAAFHGLHDVMKDLSKHYSQKSTLEQELPTATEKLRTTNECILSSVVALTSVTGKIATYFSNNLDFFTASASSGTKEGVRALNPLTAECMLQYKKKAASFVKSLKKPCPESVPYKEALANRRILLSSTESREGLAQQVLQSQEKITKLEQEKEHWMLEAQLAKIKLEKENQRIADLESQLQGALSGQTVLSDVTLELIPSGSKTVDRREDPATGELRDTVRSASLIGMVTFSNAETSDESLEGLIKNHYMGRIAELTTQLQIADSKSVHFYAECRALVKRLNLAEKSREVLTENLKLANQNISRLQDELSTTKRSYEDQLSMMSDHLCSMNETLSKQKEEIDTLKMSAKGTVKKNKSR
SIO_010081: PPP1R21
subclass of: SO_0000673
so part of: PPP1R21
location: complement(join(157606940..157606969,157645748..157645876,157735457..157735555,157990499..157990612,157990721..157990750,158085930..158086193,158148694..158148786,158222652..158222804,158330902..158331029,158382893..158382985,158408259..158408395,158486833..158486921,158487023..158487124,158503453..158503602,158503752..158503804,158508355..158508449,158529999..158530057,158530507..158530671,158562516..158562617,158676289..158676435,158723824..158723892,158776156..158776209))
location: region:157606940-158776209:-1
so has part: feature:158776156-158776209:-1:exon
so has part: feature:158723824-158723892:-1:exon
so has part: feature:158676289-158676435:-1:exon
so has part: feature:158562516-158562617:-1:exon
so has part: feature:158530507-158530671:-1:exon
so has part: feature:158529999-158530057:-1:exon
so has part: feature:158508355-158508449:-1:exon
so has part: feature:158503752-158503804:-1:exon
so has part: feature:158503453-158503602:-1:exon
so has part: feature:158487023-158487124:-1:exon
so has part: feature:158486833-158486921:-1:exon
so has part: feature:158408259-158408395:-1:exon
so has part: feature:158382893-158382985:-1:exon
so has part: feature:158330902-158331029:-1:exon
so has part: feature:158222652-158222804:-1:exon
so has part: feature:158148694-158148786:-1:exon
so has part: feature:158085930-158086193:-1:exon
so has part: feature:157990721-157990750:-1:exon
so has part: feature:157990499-157990612:-1:exon
so has part: feature:157735457-157735555:-1:exon
so has part: feature:157645748-157645876:-1:exon
so has part: feature:157606940-157606969:-1:exon

XP_043911277.1
type: Protein
SIO_000068: ncbiprotein

position:157606940:-1
position: 157606940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158776209:-1
position: 158776209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158776156-158776209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158723824-158723892:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158676289-158676435:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158562516-158562617:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:158530507-158530671:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158529999-158530057:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:158508355-158508449:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158503752-158503804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:158503453-158503602:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:158487023-158487124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:158486833-158486921:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:158408259-158408395:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:158382893-158382985:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:158330902-158331029:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:158222652-158222804:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:158148694-158148786:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:158085930-158086193:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:157990721-157990750:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:157990499-157990612:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:157735457-157735555:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:157645748-157645876:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:157606940-157606969:-1:exon

PPP1R21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: PPP1R21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 21 isoform X1
translation: MAADLQGKYQKLAQEYSKLRAQNQVLKKGVVDEQANSAALKEQLKMKEQSLRKLQQEMDSLTFRNQQLAKRVELLQEELTAMEAKGKKNKDFPESKILVAHKSSDSPPQLRQDQQNVFDEDLQKKIEENERLHMQFFEADEQHKQIETELRKRLAVLERETSEHQAVVNSLTQKYTETVEKLQNDKAKLEVKSQALEREAKDCRLRTEECQEQLKTLHTDLSSKLADCTGIIQEKIPFNDTKCCHLSGLNVLPHNRRRQLKARDIAGQALAFLQDLVASLLNFHTYMEQRVQIFPIDSAIDTISPLNQKFSQHLHENAVYVRPLEEGMIHLFESITEDTVTILETAVQLKEFSDHLTSYTCFLNKILPYQLKSLEEECESSTCTSALMSKNMELHKDFKQMTVMFKKVQTYISLLALPSTRPEVLPPSNFSAVFTQLAAAFHGLHDVMKDLSKHYSQKSTLEQELPTATEKLRTTNECILSSVVALTSVTGKIATYFSNNLDFFTASASSGTKEGVRALNPLTAECMLQYKKKAASFVKSLKKPCPESVPYKEALANRRILLSSTESREGLAQQVLQSQEKITKLEQEKEHWMLEAQLAKIKLEKENQRIADLESQLQGALSGQTVLSDVTLELIPSGSKTVDRREDPATGELRDTVRSASLIGMVTFSNAETSDESLEGLIKNHYMGRIAELTTQLQIADSKSVHFYAECRALVKRLNLAEKSREVLTENLKLANQNISRLQDELSTTKRSYEDQLSMMSDHLCSMNETLSKQKEEIDTLKMSAKGTVKKNKSR
SIO_010081: PPP1R21
subclass of: SO_0000673
so part of: PPP1R21
location: complement(join(157606940..157606969,157645748..157645876,157735457..157735555,157990499..157990612,157990721..157990750,158085930..158086193,158148694..158148786,158222652..158222804,158330902..158331029,158382893..158382985,158408259..158408395,158486833..158486921,158487023..158487124,158503453..158503602,158503752..158503804,158508355..158508449,158529999..158530057,158530507..158530671,158562516..158562617,158634925..158634957,158676289..158676435,158723824..158723892,158776156..158776209))
location: region:157606940-158776209:-1
so has part: feature:158776156-158776209:-1:exon
so has part: feature:158723824-158723892:-1:exon
so has part: feature:158676289-158676435:-1:exon
so has part: feature:158634925-158634957:-1:exon
so has part: feature:158562516-158562617:-1:exon
so has part: feature:158530507-158530671:-1:exon
so has part: feature:158529999-158530057:-1:exon
so has part: feature:158508355-158508449:-1:exon
so has part: feature:158503752-158503804:-1:exon
so has part: feature:158503453-158503602:-1:exon
so has part: feature:158487023-158487124:-1:exon
so has part: feature:158486833-158486921:-1:exon
so has part: feature:158408259-158408395:-1:exon
so has part: feature:158382893-158382985:-1:exon
so has part: feature:158330902-158331029:-1:exon
so has part: feature:158222652-158222804:-1:exon
so has part: feature:158148694-158148786:-1:exon
so has part: feature:158085930-158086193:-1:exon
so has part: feature:157990721-157990750:-1:exon
so has part: feature:157990499-157990612:-1:exon
so has part: feature:157735457-157735555:-1:exon
so has part: feature:157645748-157645876:-1:exon
so has part: feature:157606940-157606969:-1:exon

XP_043911269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158776156-158776209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158723824-158723892:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158676289-158676435:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158634925-158634957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:158562516-158562617:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158530507-158530671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:158529999-158530057:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158508355-158508449:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:158503752-158503804:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:158503453-158503602:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:158487023-158487124:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:158486833-158486921:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:158408259-158408395:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:158382893-158382985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:158330902-158331029:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:158222652-158222804:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:158148694-158148786:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:158085930-158086193:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:157990721-157990750:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:157990499-157990612:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:157735457-157735555:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:157645748-157645876:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:157606940-157606969:-1:exon

PPP1R21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: PPP1R21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 21 isoform X3
translation: MKEQSLRKLQQEMDSLTFRNQQLAKRVELLQEELTAMEAKGKKNKDFPESKILVAHKSSDSPPQLRQDQQNVFDEDLQKKIEENERLHMQFFEADEQHKQIETELRKRLAVLERETSEHQAVVNSLTQKYTETVEKLQNDKAKLEVKSQALEREAKDCRLRTEECQEQLKTLHTDLSSKLADCTGIIQEKIPFNDTKCCHLSGLNVLPHNRRRQLKARDIAGQALAFLQDLVASLLNFHTYMEQRVQIFPIDSAIDTISPLNQKFSQHLHENAVYVRPLEEGMIHLFESITEDTVTILETAVQLKEFSDHLTSYTCFLNKILPYQLKSLEEECESSTCTSALMSKNMELHKDFKQMTVMFKKVQTYISLLALPSTRPEVLPPSNFSAVFTQLAAAFHGLHDVMKDLSKHYSQKSTLEQELPTATEKLRTTNECILSSVVALTSVTGKIATYFSNNLDFFTASASSGTKEGVRALNPLTAECMLQYKKKAASFVKSLKKPCPESVPYKEALANRRILLSSTESREGLAQQVLQSQEKITKLEQEKEHWMLEAQLAKIKLEKENQRIADLESQLQGALSGQTVLSDVTLELIPSGSKTVDRREDPATGELRDTVRSASLIGMVTFSNAETSDESLEGLIKNHYMGRIAELTTQLQIADSKSVHFYAECRALVKRLNLAEKSREVLTENLKLANQNISRLQDELSTTKRSYEDQLSMMSDHLCSMNETLSKQKEEIDTLKMSAKGTVKKNKSR
SIO_010081: PPP1R21
subclass of: SO_0000673
so part of: PPP1R21
location: complement(join(157606940..157606969,157645748..157645876,157735457..157735555,157990499..157990612,157990721..157990750,158085930..158086193,158148694..158148786,158222652..158222804,158330902..158331029,158382893..158382985,158408259..158408395,158486833..158486921,158487023..158487124,158503453..158503602,158503752..158503804,158508355..158508449,158529999..158530057,158530507..158530671,158562516..158562617,158634925..158634957,158676289..158676423))
location: region:157606940-158676423:-1
so has part: feature:158676289-158676423:-1:exon
so has part: feature:158634925-158634957:-1:exon
so has part: feature:158562516-158562617:-1:exon
so has part: feature:158530507-158530671:-1:exon
so has part: feature:158529999-158530057:-1:exon
so has part: feature:158508355-158508449:-1:exon
so has part: feature:158503752-158503804:-1:exon
so has part: feature:158503453-158503602:-1:exon
so has part: feature:158487023-158487124:-1:exon
so has part: feature:158486833-158486921:-1:exon
so has part: feature:158408259-158408395:-1:exon
so has part: feature:158382893-158382985:-1:exon
so has part: feature:158330902-158331029:-1:exon
so has part: feature:158222652-158222804:-1:exon
so has part: feature:158148694-158148786:-1:exon
so has part: feature:158085930-158086193:-1:exon
so has part: feature:157990721-157990750:-1:exon
so has part: feature:157990499-157990612:-1:exon
so has part: feature:157735457-157735555:-1:exon
so has part: feature:157645748-157645876:-1:exon
so has part: feature:157606940-157606969:-1:exon

XP_043911286.1
type: Protein
SIO_000068: ncbiprotein

position:158676423:-1
position: 158676423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158676289-158676423:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158634925-158634957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158562516-158562617:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158530507-158530671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:158529999-158530057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158508355-158508449:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:158503752-158503804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158503453-158503602:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:158487023-158487124:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:158486833-158486921:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:158408259-158408395:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:158382893-158382985:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:158330902-158331029:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:158222652-158222804:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:158148694-158148786:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:158085930-158086193:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:157990721-157990750:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:157990499-157990612:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:157735457-157735555:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:157645748-157645876:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:157606940-157606969:-1:exon

BBS10
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: BBS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 158776242..158972509
location: region:158776242-158972509:1
so has part: feature:158776242-158972509:1:exon
subclass of: SO_0000010

122788287
type: Gene
SIO_000068: ncbigene

position:158776242:1
position: 158776242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158972509:1
position: 158972509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158776242-158972509:1:exon

BBS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: BBS10
product: Bardet-Biedl syndrome 10, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055364.1
SIO_010081: BBS10
subclass of: SO_0000673
so part of: BBS10
location: join(158776242..158776339,158806600..158806809,158970395..158972509)
location: region:158776242-158972509:1
so has part: feature:158776242-158776339:1:exon
so has part: feature:158806600-158806809:1:exon
so has part: feature:158970395-158972509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:158776242-158776339:1:exon

position:158776339:1
position: 158776339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158806600-158806809:1:exon

position:158806600:1
position: 158806600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158806809:1
position: 158806809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:158970395-158972509:1:exon

position:158970395:1
position: 158970395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BBS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: BBS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Bardet-Biedl syndrome 10 protein isoform X1
translation: MPKMVKGRYLFTHAQNGVCTVGIITHSNGLYLPHCHLLKMQSICTVEIGTVLRVTEILENIVCKCFGPKGGQVLFTKATGEILITRDGRTILESLLLDHPIARVIVKCISTHCNMTGDGAKSFILLLCSFLRRLKTLADKECGFSTSENIPDKRRWQNHGHFLKRFSCNLYAFQAQVLDHLIAQQVRQYSSSAFSQINGKSYICHRTLEAVLDAYFFGSIGQINNIFMTKLTSDFFFRCTESSENYTDILDFIIDHFFEFHTAVSGLPIGCSKVLEGLVLHRDFAVFCPTDGTVRIIVVSASISPSLSVSDSTFVICSDSQLHSSQVWITVRVKEVMTFLQNNSVNLILSSVKQSETVHYFAKLCNISLVECLSDGEISLFCCITGISAFASIEDIIQSEIVTVTATAAFYKPLVLGAHRYVHLHLLSIKDFKPHCVVIYGPVQGLTEQYVVALVGALKVLKHLLKPVNSGCSLAEIKDKAMILPKDVANSCTAVLNEDDVNTVDASVKIERQCMDITECVVDTIHETQGPEDYPQTVTEGAVSNVPEVNSSTLSPYEERRVACLLQTCACCSTVQLHHKSNDAAELSRTKLDGYSIEMQEFEEQDSTTAAVDNSSSTVPCKKLSVTRNCERKCDEGNHTCNLVHKNNFQVANSLIEAGSVLPAGGTFEFLLHYTIMNYANKCHNPAINNVCSVIADGLLNIPRHIYCSQKGNRNLLHKLTKTLDNIKLCRPLTVDNDCLESVSCKYQLLLSVIQCLMKLITIDAVVAIKKKLQTVTDCENQ
SIO_010081: BBS10
subclass of: SO_0000673
so part of: BBS10
location: join(158776242..158776339,158806600..158806809,158970395..158972435)
location: region:158776242-158972435:1
so has part: feature:158776242-158776339:1:exon
so has part: feature:158806600-158806809:1:exon
so has part: feature:158970395-158972435:1:exon

XP_043911299.1
type: Protein
SIO_000068: ncbiprotein

position:158972435:1
position: 158972435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158776242-158776339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158806600-158806809:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158970395-158972435:1:exon

BBS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: BBS10
product: Bardet-Biedl syndrome 10, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_044055370.1
SIO_010081: BBS10
subclass of: SO_0000673
so part of: BBS10
location: join(158776303..158776339,158782460..158783866,158806600..158806809,158970395..158972509)
location: region:158776303-158972509:1
so has part: feature:158776303-158776339:1:exon
so has part: feature:158782460-158783866:1:exon
so has part: feature:158806600-158806809:1:exon
so has part: feature:158970395-158972509:1:exon

position:158776303:1
position: 158776303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158776303-158776339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158782460-158783866:1:exon

position:158782460:1
position: 158782460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158783866:1
position: 158783866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:158806600-158806809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158970395-158972509:1:exon

BBS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: BBS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Bardet-Biedl syndrome 10 protein isoform X2
translation: MQSICTVEIGTVLRVTEILENIVCKCFGPKGGQVLFTKATGEILITRDGRTILESLLLDHPIARVIVKCISTHCNMTGDGAKSFILLLCSFLRRLKTLADKECGFSTSENIPDKRRWQNHGHFLKRFSCNLYAFQAQVLDHLIAQQVRQYSSSAFSQINGKSYICHRTLEAVLDAYFFGSIGQINNIFMTKLTSDFFFRCTESSENYTDILDFIIDHFFEFHTAVSGLPIGCSKVLEGLVLHRDFAVFCPTDGTVRIIVVSASISPSLSVSDSTFVICSDSQLHSSQVWITVRVKEVMTFLQNNSVNLILSSVKQSETVHYFAKLCNISLVECLSDGEISLFCCITGISAFASIEDIIQSEIVTVTATAAFYKPLVLGAHRYVHLHLLSIKDFKPHCVVIYGPVQGLTEQYVVALVGALKVLKHLLKPVNSGCSLAEIKDKAMILPKDVANSCTAVLNEDDVNTVDASVKIERQCMDITECVVDTIHETQGPEDYPQTVTEGAVSNVPEVNSSTLSPYEERRVACLLQTCACCSTVQLHHKSNDAAELSRTKLDGYSIEMQEFEEQDSTTAAVDNSSSTVPCKKLSVTRNCERKCDEGNHTCNLVHKNNFQVANSLIEAGSVLPAGGTFEFLLHYTIMNYANKCHNPAINNVCSVIADGLLNIPRHIYCSQKGNRNLLHKLTKTLDNIKLCRPLTVDNDCLESVSCKYQLLLSVIQCLMKLITIDAVVAIKKKLQTVTDCENQ
SIO_010081: BBS10
subclass of: SO_0000673
so part of: BBS10
location: join(158806619..158806809,158970395..158972435)
location: region:158806619-158972435:1
so has part: feature:158806619-158806809:1:exon
so has part: feature:158970395-158972435:1:exon

XP_043911305.1
type: Protein
SIO_000068: ncbiprotein

position:158806619:1
position: 158806619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158806619-158806809:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158970395-158972435:1:exon

FOXN2
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: FOXN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(159517810..160114702)
location: region:159517810-160114702:-1
so has part: feature:159517810-160114702:-1:exon
subclass of: SO_0000010

122788295
type: Gene
SIO_000068: ncbigene

position:159517810:-1
position: 159517810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160114702:-1
position: 160114702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159517810-160114702:-1:exon

FOXN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: FOXN2
product: forkhead box N2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_044055382.1
SIO_010081: FOXN2
subclass of: SO_0000673
so part of: FOXN2
location: complement(join(159517810..159520461,159575001..159575072,159620235..159620299,159690881..159691005,159953014..159953567,160114307..160114702))
location: region:159517810-160114702:-1
so has part: feature:160114307-160114702:-1:exon
so has part: feature:159953014-159953567:-1:exon
so has part: feature:159690881-159691005:-1:exon
so has part: feature:159620235-159620299:-1:exon
so has part: feature:159575001-159575072:-1:exon
so has part: feature:159517810-159520461:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160114307-160114702:-1:exon

position:160114307:-1
position: 160114307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:159953014-159953567:-1:exon

position:159953014:-1
position: 159953014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159953567:-1
position: 159953567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:159690881-159691005:-1:exon

position:159690881:-1
position: 159690881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159691005:-1
position: 159691005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:159620235-159620299:-1:exon

position:159620235:-1
position: 159620235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159620299:-1
position: 159620299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:159575001-159575072:-1:exon

position:159575001:-1
position: 159575001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159575072:-1
position: 159575072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:159517810-159520461:-1:exon

position:159520461:-1
position: 159520461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FOXN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: FOXN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein N2
translation: MGPVNGMSPETKAETAGIQNIARLKHSDRMGTLPEAVSAAGPKATSVDRESADDEELTNLNWLHEDTNLLKNFSLGDEGFSVVSPFYDIEGDGLPSFSPPCSQNQMKRPASTKPPYSFSLLIYMAIEGSPNKCLPVKEIYSWILEHFPYFATAPTGWKNSVRHNLSLNKCFRKVERGHGKTNGKGSLWCVEPEYKPNLLQALRKQPYCRMFALYTPPASPSSASSPTYHITSVLKQHQGCPIKAEPDIDAATAMMLLNSSFEQRTSEGTPSKQLVPVLPKKRSYSSAFEQRSTNVYGVETVAGIDPKEDHNYSATTAATDASHRCESRSSVSSLSSVDEVYEFVPETTPAGSDGSEGFHSEEDTEVEDSDDPLGDSGYSSQKHENTSSKVWLSKKPRKEVGQEIDEELKEAAGSLLHLAGIRMCLDSLISTAKAKSKKHLKN
SIO_010081: FOXN2
subclass of: SO_0000673
so part of: FOXN2
location: complement(join(159519935..159520461,159575001..159575072,159620235..159620299,159690881..159691005,159953014..159953553))
location: region:159519935-159953553:-1
so has part: feature:159953014-159953553:-1:exon
so has part: feature:159690881-159691005:-1:exon
so has part: feature:159620235-159620299:-1:exon
so has part: feature:159575001-159575072:-1:exon
so has part: feature:159519935-159520461:-1:exon

XP_043911317.1
type: Protein
SIO_000068: ncbiprotein

position:159519935:-1
position: 159519935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159953553:-1
position: 159953553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159953014-159953553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:159690881-159691005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:159620235-159620299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159575001-159575072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159519935-159520461:-1:exon

LOC122792339
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: LOC122792339
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(161638700..161639949)
location: region:161638700-161639949:-1
so has part: feature:161638700-161639949:-1:exon

122792339
type: Gene
SIO_000068: ncbigene

position:161638700:-1
position: 161638700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161639949:-1
position: 161639949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161638700-161639949:-1:exon

LOC122792339
type: Exon
subclass of: SO_0000147
RO_0002162: 7888
gene: LOC122792339
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC122792339
subclass of: SO_0000673
so part of: LOC122792339
location: complement(161638700..161639821)
location: region:161638700-161639821:-1
so has part: feature:161638700-161639821:-1:exon

position:161639821:-1
position: 161639821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161638700-161639821:-1:exon

LOC122792339
type: Exon
subclass of: SO_0000147
RO_0002162: 7888
gene: LOC122792339
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC122792339
subclass of: SO_0000673
so part of: LOC122792339
location: complement(161639922..161639949)
location: region:161639922-161639949:-1
so has part: feature:161639922-161639949:-1:exon

position:161639922:-1
position: 161639922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161639922-161639949:-1:exon

PPP2R5A
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: PPP2R5A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 164575245..166854432
location: region:164575245-166854432:1
so has part: feature:164575245-166854432:1:exon
subclass of: SO_0000010

122788302
type: Gene
SIO_000068: ncbigene

position:164575245:1
position: 164575245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166854432:1
position: 166854432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164575245-166854432:1:exon

PPP2R5A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7888
gene: PPP2R5A
product: protein phosphatase 2 regulatory subunit B'alpha
experiment: COORDINATES: polyA evidence [ECO:0006239]
inference: similar to RNA sequence (same species):INSD:GGXP01030033.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 93 bases not found in genome assembly
transcript id: XM_044055395.1
SIO_010081: PPP2R5A
subclass of: SO_0000673
so part of: PPP2R5A
location: join(164575245..164575443,164782500..164782696,164884869..>164884970,<165512242..165512372,165779359..165779418,165883488..165883596,165971890..165971943,166244380..166244430,166375011..166375130,166522419..166522546,166765678..166765779,166853289..166854432)
location: region:164575245-166854432:1
so has part: feature:164575245-164575443:1:exon
so has part: feature:164782500-164782696:1:exon
so has part: feature:164884869-164884970:1:exon
so has part: feature:165512242-165512372:1:exon
so has part: feature:165779359-165779418:1:exon
so has part: feature:165883488-165883596:1:exon
so has part: feature:165971890-165971943:1:exon
so has part: feature:166244380-166244430:1:exon
so has part: feature:166375011-166375130:1:exon
so has part: feature:166522419-166522546:1:exon
so has part: feature:166765678-166765779:1:exon
so has part: feature:166853289-166854432:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:164575245-164575443:1:exon

position:164575443:1
position: 164575443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:164782500-164782696:1:exon

position:164782500:1
position: 164782500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164782696:1
position: 164782696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:164884869-164884970:1:exon

position:164884869:1
position: 164884869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164884970:1
position: 164884970
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 4
SIO_000628: feature:165512242-165512372:1:exon

position:165512242:1
position: 165512242
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:165512372:1
position: 165512372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:165779359-165779418:1:exon

position:165779359:1
position: 165779359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165779418:1
position: 165779418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:165883488-165883596:1:exon

position:165883488:1
position: 165883488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165883596:1
position: 165883596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:165971890-165971943:1:exon

position:165971890:1
position: 165971890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165971943:1
position: 165971943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:166244380-166244430:1:exon

position:166244380:1
position: 166244380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166244430:1
position: 166244430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:166375011-166375130:1:exon

position:166375011:1
position: 166375011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166375130:1
position: 166375130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:166522419-166522546:1:exon

position:166522419:1
position: 166522419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166522546:1
position: 166522546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:166765678-166765779:1:exon

position:166765678:1
position: 166765678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166765779:1
position: 166765779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:166853289-166854432:1:exon

position:166853289:1
position: 166853289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP2R5A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: PPP2R5A
inference: similar to RNA sequence (same species):INSD:GGXP01030033.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 93 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform
translation: MSAISAAEKVDGFTRKSVRKAQRQKRSHGSSQFRSPTSPIELSPLQQLKDAPLSEHQELFIQKLQQCCVLFDFYDSVSDLKSKEVKRATLNELIDFISTNRGVLVDSSYGDVVKMISNNIFRTLPPSDNPDFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPSSAKRYIDQKFVLQLLELFDSEDPRERDFLKTILHRIYGKFLGLRAFIRKQINNIFLCFIYETDHFNGVAELLEILGSIINGFALPLKAEHKQFLIKVLIPMHTAKGLAMFHAQLAYCVVQFLEKDSALSEIVVRGLLKIWPKTCSQKEVMFLGEIEEILDVIEPSQFKKIHEPLFRQISKCVSSPHFQVAERALYFWNNEYILSLIEENINTVLPLMFGSLYRISKEHWNPTIVALVYNVLKTLMEMNSKLFDELTASYKVERQREKKKEHEREELWRKLEELKLKKTMSEIQSNANNIQIALTSKAGAK
SIO_010081: PPP2R5A
subclass of: SO_0000673
so part of: PPP2R5A
location: join(164575296..164575443,164782500..164782696,164884869..>164884970,<165512242..165512372,165779359..165779418,165883488..165883596,165971890..165971943,166244380..166244430,166375011..166375130,166522419..166522546,166765678..166765779,166853289..166853427)
location: region:164575296-166853427:1
so has part: feature:164575296-164575443:1:exon
so has part: feature:164782500-164782696:1:exon
so has part: feature:164884869-164884970:1:exon
so has part: feature:165512242-165512372:1:exon
so has part: feature:165779359-165779418:1:exon
so has part: feature:165883488-165883596:1:exon
so has part: feature:165971890-165971943:1:exon
so has part: feature:166244380-166244430:1:exon
so has part: feature:166375011-166375130:1:exon
so has part: feature:166522419-166522546:1:exon
so has part: feature:166765678-166765779:1:exon
so has part: feature:166853289-166853427:1:exon

XP_043911330.1
type: Protein
SIO_000068: ncbiprotein

position:164575296:1
position: 164575296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166853427:1
position: 166853427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164575296-164575443:1:exon