Protopterus annectens mitochondrion, complete genome.
type: Entry
definition: Protopterus annectens mitochondrion, complete genome.
sequence version: NC_018822.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_018822.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Protopterus annectens (West African lungfish)
organism: Protopterus annectens
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Dipnomorpha; Ceratodontiformes; Lepidosirenoidei; Protopteridae; Protopterus.
reference: 1
reference: 2
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence is identical to JX568887.\n\n##Assembly-Data-START##\nAssembly Method :: Trinity\nSequencing Technology :: Illumina\n##Assembly-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16657
topology: circular
so has quality: SO_0000988
location: 1..16657
location: region:1-16657:1
RO_0002162: 7888

NC_018822
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Direct Submission
journal: Submitted (11-OCT-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

2
title: Direct Submission
author: Amemiya, C.T.
author: Alfoldi, J.
journal: Submitted (03-SEP-2012) Molecular Genetics, Benaroya Research Institute, 1201 Ninth Avenue, Seattle, WA 98101, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16657:1
position: 16657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16657:1:source
so part of: sequence
organism: Protopterus annectens
organelle: mitochondrion
mol type: genomic DNA

7888
type: Taxonomy
SIO_000068: taxonomy

D240_mgt01
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt01
so part of: sequence
location: 1..68
location: region:1-68:1
so has part: feature:1-68:1:exon
subclass of: SO_0000663

79566741
type: Gene
SIO_000068: ncbigene

position:68:1
position: 68
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-68:1:exon

D240_mgt01
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt01
product: tRNA-Phe
anticodon: (pos:31..33,aa:Phe,seq:gaa)
SIO_010081: D240_mgt01
subclass of: SO_0000673
so part of: D240_mgt01
location: 1..68
location: region:1-68:1
so has part: feature:1-68:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-68:1:exon

D240_mgr02
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgr02
so part of: sequence
location: 69..1002
location: region:69-1002:1
so has part: feature:69-1002:1:exon
subclass of: SO_0000573

79566742
type: Gene
SIO_000068: ncbigene

position:69:1
position: 69
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002:1
position: 1002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69-1002:1:exon

D240_mgr02
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 7888
locus tag: D240_mgr02
product: s-rRNA
SIO_010081: D240_mgr02
subclass of: SO_0000673
so part of: D240_mgr02
location: 69..1002
location: region:69-1002:1
so has part: feature:69-1002:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:69-1002:1:exon

D240_mgt02
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt02
so part of: sequence
location: 1003..1074
location: region:1003-1074:1
so has part: feature:1003-1074:1:exon
subclass of: SO_0000663

79566743
type: Gene
SIO_000068: ncbigene

position:1003:1
position: 1003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074:1
position: 1074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1003-1074:1:exon

D240_mgt02
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt02
product: tRNA-Val
anticodon: (pos:1036..1038,aa:Val,seq:tac)
SIO_010081: D240_mgt02
subclass of: SO_0000673
so part of: D240_mgt02
location: 1003..1074
location: region:1003-1074:1
so has part: feature:1003-1074:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1003-1074:1:exon

D240_mgr01
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgr01
so part of: sequence
location: 1075..2666
location: region:1075-2666:1
so has part: feature:1075-2666:1:exon
subclass of: SO_0000573

79566744
type: Gene
SIO_000068: ncbigene

position:1075:1
position: 1075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2666:1
position: 2666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075-2666:1:exon

D240_mgr01
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 7888
locus tag: D240_mgr01
product: l-rRNA
SIO_010081: D240_mgr01
subclass of: SO_0000673
so part of: D240_mgr01
location: 1075..2666
location: region:1075-2666:1
so has part: feature:1075-2666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1075-2666:1:exon

D240_mgt03
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt03
so part of: sequence
location: 2667..2741
location: region:2667-2741:1
so has part: feature:2667-2741:1:exon
subclass of: SO_0000663

79566745
type: Gene
SIO_000068: ncbigene

position:2667:1
position: 2667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2741:1
position: 2741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2667-2741:1:exon

D240_mgt03
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt03
product: tRNA-Leu
anticodon: (pos:2702..2704,aa:Leu,seq:taa)
codon recognized: UUR
SIO_010081: D240_mgt03
subclass of: SO_0000673
so part of: D240_mgt03
location: 2667..2741
location: region:2667-2741:1
so has part: feature:2667-2741:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2667-2741:1:exon

D240_mgp13
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: ND1
locus tag: D240_mgp13
so part of: sequence
location: 2742..3708
location: region:2742-3708:1
so has part: feature:2742-3708:1:exon
subclass of: SO_0000010

13826023
type: Gene
SIO_000068: ncbigene

position:2742:1
position: 2742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3708:1
position: 3708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2742-3708:1:exon

D240_mgp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: ND1
locus tag: D240_mgp13
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:3708,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MNPLPTITNSLMYIVPILLAVAFLTLVERKIIGYMQHRKGPNVVGPYGLLQPIADGVKLFIKEPVRPTASSTTLFILAPTLALTLALLIWTPLPMPFPMANVNLTLLFIMAVSSLSVYSILTSGWASNSKYALIGALRAIAQTISYEVSLGLILLAAIIFMGNFSMLTFSTGQEAIWLIIPAWPLATMWYVSTLAETNRSPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIMLMNTISVIIFLGDSLNLLLPEMMTSLLMLKTTALSLVFLWVRASYPRFRYDQLMHLIWKNFLPLTLSLIILHISAPLAFTGLPPQF
SIO_010081: D240_mgp13
subclass of: SO_0000673
so part of: D240_mgp13
location: 2742..3708
location: region:2742-3708:1
so has part: feature:2742-3708:1:exon

YP_006884097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2742-3708:1:exon

D240_mgt04
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt04
so part of: sequence
location: 3709..3780
location: region:3709-3780:1
so has part: feature:3709-3780:1:exon
subclass of: SO_0000663

79566732
type: Gene
SIO_000068: ncbigene

position:3709:1
position: 3709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3780:1
position: 3780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3709-3780:1:exon

D240_mgt04
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt04
product: tRNA-Ile
anticodon: (pos:3741..3743,aa:Ile,seq:gat)
SIO_010081: D240_mgt04
subclass of: SO_0000673
so part of: D240_mgt04
location: 3709..3780
location: region:3709-3780:1
so has part: feature:3709-3780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3709-3780:1:exon

D240_mgt05
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt05
so part of: sequence
location: complement(3778..3848)
location: region:3778-3848:-1
so has part: feature:3778-3848:-1:exon
subclass of: SO_0000663

79566746
type: Gene
SIO_000068: ncbigene

position:3778:-1
position: 3778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3848:-1
position: 3848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3778-3848:-1:exon

D240_mgt05
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt05
product: tRNA-Gln
anticodon: (pos:complement(3814..3816),aa:Gln,seq:ttg)
SIO_010081: D240_mgt05
subclass of: SO_0000673
so part of: D240_mgt05
location: complement(3778..3848)
location: region:3778-3848:-1
so has part: feature:3778-3848:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3778-3848:-1:exon

D240_mgt06
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt06
so part of: sequence
location: 3848..3916
location: region:3848-3916:1
so has part: feature:3848-3916:1:exon
subclass of: SO_0000663

79566747
type: Gene
SIO_000068: ncbigene

position:3848:1
position: 3848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3916:1
position: 3916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3848-3916:1:exon

D240_mgt06
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt06
product: tRNA-Met
anticodon: (pos:3878..3880,aa:Met,seq:cat)
SIO_010081: D240_mgt06
subclass of: SO_0000673
so part of: D240_mgt06
location: 3848..3916
location: region:3848-3916:1
so has part: feature:3848-3916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3848-3916:1:exon

D240_mgp12
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: ND2
locus tag: D240_mgp12
so part of: sequence
location: 3917..4948
location: region:3917-4948:1
so has part: feature:3917-4948:1:exon
subclass of: SO_0000010

13826011
type: Gene
SIO_000068: ncbigene

position:3917:1
position: 3917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4948:1
position: 4948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3917-4948:1:exon

D240_mgp12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: ND2
locus tag: D240_mgp12
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MSPTILSVLIMSLGLGTTVTFMSSNWLLAWIGLEINTMSIIPLMSQQHHPRATEAATKYFLAQAAASIMILFSSMINAWVAGEWNITNLLSPTSATLITLALAIKIGLAPMHFWLPEVLQGVTLMTGAILVTWQKLAPFILLYQISDTVNPTLLLVLGLLSTLTGGWSGLNQTQLRKILAYSSIAHMGWMTMILPFAPNLALLNLMIYITLTLPLFFTLNICSSTSIPSLALNWTKSPLLMTMLLITLLSLGGLPPLTGFMPKWLILQELTNNDLYIFATAAALSALLSLYFYLRLCYTTSLTTSPNTLNNNHWRPNAGTYQILSMILIFATALLPLTPGLIM
SIO_010081: D240_mgp12
subclass of: SO_0000673
so part of: D240_mgp12
location: 3917..4948
location: region:3917-4948:1
so has part: feature:3917-4948:1:exon

YP_006884098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3917-4948:1:exon

D240_mgt07
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt07
so part of: sequence
location: 4951..5020
location: region:4951-5020:1
so has part: feature:4951-5020:1:exon
subclass of: SO_0000663

79566733
type: Gene
SIO_000068: ncbigene

position:4951:1
position: 4951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5020:1
position: 5020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4951-5020:1:exon

D240_mgt07
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt07
product: tRNA-Trp
anticodon: (pos:4982..4984,aa:Trp,seq:tca)
SIO_010081: D240_mgt07
subclass of: SO_0000673
so part of: D240_mgt07
location: 4951..5020
location: region:4951-5020:1
so has part: feature:4951-5020:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4951-5020:1:exon

D240_mgt08
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt08
so part of: sequence
location: complement(5021..5089)
location: region:5021-5089:-1
so has part: feature:5021-5089:-1:exon
subclass of: SO_0000663

79566748
type: Gene
SIO_000068: ncbigene

position:5021:-1
position: 5021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5089:-1
position: 5089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5021-5089:-1:exon

D240_mgt08
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt08
product: tRNA-Ala
anticodon: (pos:complement(5057..5059),aa:Ala,seq:tgc)
SIO_010081: D240_mgt08
subclass of: SO_0000673
so part of: D240_mgt08
location: complement(5021..5089)
location: region:5021-5089:-1
so has part: feature:5021-5089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5021-5089:-1:exon

D240_mgt09
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt09
so part of: sequence
location: complement(5090..5162)
location: region:5090-5162:-1
so has part: feature:5090-5162:-1:exon
subclass of: SO_0000663

79566749
type: Gene
SIO_000068: ncbigene

position:5090:-1
position: 5090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5162:-1
position: 5162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5090-5162:-1:exon

D240_mgt09
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt09
product: tRNA-Asn
anticodon: (pos:complement(5127..5129),aa:Asn,seq:gtt)
SIO_010081: D240_mgt09
subclass of: SO_0000673
so part of: D240_mgt09
location: complement(5090..5162)
location: region:5090-5162:-1
so has part: feature:5090-5162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5090-5162:-1:exon

D240_mgt10
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt10
so part of: sequence
location: complement(5188..5254)
location: region:5188-5254:-1
so has part: feature:5188-5254:-1:exon
subclass of: SO_0000663

79566750
type: Gene
SIO_000068: ncbigene

position:5188:-1
position: 5188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5254:-1
position: 5254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5188-5254:-1:exon

D240_mgt10
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt10
product: tRNA-Cys
anticodon: (pos:complement(5224..5226),aa:Cys,seq:gca)
SIO_010081: D240_mgt10
subclass of: SO_0000673
so part of: D240_mgt10
location: complement(5188..5254)
location: region:5188-5254:-1
so has part: feature:5188-5254:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5188-5254:-1:exon

D240_mgt11
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt11
so part of: sequence
location: complement(5255..5323)
location: region:5255-5323:-1
so has part: feature:5255-5323:-1:exon
subclass of: SO_0000663

79566751
type: Gene
SIO_000068: ncbigene

position:5255:-1
position: 5255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5323:-1
position: 5323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5255-5323:-1:exon

D240_mgt11
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt11
product: tRNA-Tyr
anticodon: (pos:complement(5290..5292),aa:Tyr,seq:gta)
SIO_010081: D240_mgt11
subclass of: SO_0000673
so part of: D240_mgt11
location: complement(5255..5323)
location: region:5255-5323:-1
so has part: feature:5255-5323:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5255-5323:-1:exon

D240_mgp11
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: COX1
locus tag: D240_mgp11
so part of: sequence
location: 5325..6872
location: region:5325-6872:1
so has part: feature:5325-6872:1:exon
subclass of: SO_0000010

13826012
type: Gene
SIO_000068: ncbigene

position:5325:1
position: 5325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6872:1
position: 6872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5325-6872:1:exon

D240_mgp11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: COX1
locus tag: D240_mgp11
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MTLTRWLFSTNHKDIGTLYMVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVLVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLAGSGVEAGAGTGWTVYPPLASNLAHAGASVDLTIFSLHLAGVSSILGSINFITTIINMKPPAASQYQTPLFIWSVMITTVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVAFYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPLLWALGFIFLFTVGGLTGIVLANSSLDIMLHDTYYVVAHFHYVLSMGAVFAIMGGLMHWFPLMTGYTLHDTWTKIHFGVMFLGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTLSSVGSLISLVAVILLLFIIWEAFASKREVNSIELIYTNVEWMHGCPPPYHTFEEPAFVQIQR
SIO_010081: D240_mgp11
subclass of: SO_0000673
so part of: D240_mgp11
location: 5325..6872
location: region:5325-6872:1
so has part: feature:5325-6872:1:exon

YP_006884099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5325-6872:1:exon

D240_mgt12
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt12
so part of: sequence
location: complement(6877..6947)
location: region:6877-6947:-1
so has part: feature:6877-6947:-1:exon
subclass of: SO_0000663

79566734
type: Gene
SIO_000068: ncbigene

position:6877:-1
position: 6877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6947:-1
position: 6947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6877-6947:-1:exon

D240_mgt12
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt12
product: tRNA-Ser
anticodon: (pos:complement(6913..6915),aa:Ser,seq:tga)
codon recognized: UCN
SIO_010081: D240_mgt12
subclass of: SO_0000673
so part of: D240_mgt12
location: complement(6877..6947)
location: region:6877-6947:-1
so has part: feature:6877-6947:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6877-6947:-1:exon

D240_mgt13
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt13
so part of: sequence
location: 6950..7018
location: region:6950-7018:1
so has part: feature:6950-7018:1:exon
subclass of: SO_0000663

79566752
type: Gene
SIO_000068: ncbigene

position:6950:1
position: 6950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7018:1
position: 7018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6950-7018:1:exon

D240_mgt13
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt13
product: tRNA-Asp
anticodon: (pos:6980..6982,aa:Asp,seq:gtc)
SIO_010081: D240_mgt13
subclass of: SO_0000673
so part of: D240_mgt13
location: 6950..7018
location: region:6950-7018:1
so has part: feature:6950-7018:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6950-7018:1:exon

D240_mgp10
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: COX2
locus tag: D240_mgp10
so part of: sequence
location: 7021..7711
location: region:7021-7711:1
so has part: feature:7021-7711:1:exon
subclass of: SO_0000010

13826013
type: Gene
SIO_000068: ncbigene

position:7021:1
position: 7021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7711:1
position: 7711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7021-7711:1:exon

D240_mgp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: COX2
locus tag: D240_mgp10
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:7711,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPSQLGLQDAASPVMEELIHFHDHALMIVFLISTLVLYIIVAMVSTKFTNKFILDSQEIEIVWTILPAVILIMIALPSLRILYLMDEINDPHLTVKAVGHQWYWSYEYSDYETLNFDSYMTPTQDLTPGQFRLLETDYRMVVPMESPIRVLITADDVIHSWAVPALGIKMDAVPGRLNQASFITARPGMFYGQCSEICGANHSFMPIVVEAVPLQHFENWSSLMLEKA
SIO_010081: D240_mgp10
subclass of: SO_0000673
so part of: D240_mgp10
location: 7021..7711
location: region:7021-7711:1
so has part: feature:7021-7711:1:exon

YP_006884100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7021-7711:1:exon

D240_mgt14
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt14
so part of: sequence
location: 7712..7780
location: region:7712-7780:1
so has part: feature:7712-7780:1:exon
subclass of: SO_0000663

79566735
type: Gene
SIO_000068: ncbigene

position:7712:1
position: 7712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7780:1
position: 7780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7712-7780:1:exon

D240_mgt14
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt14
product: tRNA-Lys
anticodon: (pos:7742..7744,aa:Lys,seq:ttt)
SIO_010081: D240_mgt14
subclass of: SO_0000673
so part of: D240_mgt14
location: 7712..7780
location: region:7712-7780:1
so has part: feature:7712-7780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7712-7780:1:exon

D240_mgp09
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: ATP8
locus tag: D240_mgp09
so part of: sequence
location: 7782..7949
location: region:7782-7949:1
so has part: feature:7782-7949:1:exon
subclass of: SO_0000010

13826014
type: Gene
SIO_000068: ncbigene

position:7782:1
position: 7782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7949:1
position: 7949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7782-7949:1:exon

D240_mgp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: ATP8
locus tag: D240_mgp09
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPDPWFIILLISWLTFLLILLPKILSHKTNNCPTPQSQDKLFLPPWNWPWL
SIO_010081: D240_mgp09
subclass of: SO_0000673
so part of: D240_mgp09
location: 7782..7949
location: region:7782-7949:1
so has part: feature:7782-7949:1:exon

YP_006884101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7782-7949:1:exon

D240_mgp08
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: ATP6
locus tag: D240_mgp08
so part of: sequence
location: 7940..8621
location: region:7940-8621:1
so has part: feature:7940-8621:1:exon
subclass of: SO_0000010

13826015
type: Gene
SIO_000068: ncbigene

position:7940:1
position: 7940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8621:1
position: 8621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7940-8621:1:exon

D240_mgp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: ATP6
locus tag: D240_mgp08
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:8621,aa:TERM)
transl table: 2
product: ATP synthase F0 subunit 6
translation: MTLSFFDQFLSPTILGIPLIFLSLILPWLLYPTAPNRWLTSRLLTLQNWLILRTAAQLMAPINQQGQKWAVILTSLMLFLISINLLGLLPYTFTPTTQLSMNMGFAVPMWLATVLIGLRNQPTTSIGHLLPEGTPNLLIPALVVIETISLFIRPLALGVRLTANLTAGHLLMQLIATAAFFLASVMPTIALLTYTILFLLTILELAVAMIQAYVFVLLLTLYLQENI
SIO_010081: D240_mgp08
subclass of: SO_0000673
so part of: D240_mgp08
location: 7940..8621
location: region:7940-8621:1
so has part: feature:7940-8621:1:exon

YP_006884102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7940-8621:1:exon

D240_mgp07
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: COX3
locus tag: D240_mgp07
so part of: sequence
location: 8622..9405
location: region:8622-9405:1
so has part: feature:8622-9405:1:exon
subclass of: SO_0000010

13826016
type: Gene
SIO_000068: ncbigene

position:8622:1
position: 8622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9405:1
position: 9405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8622-9405:1:exon

D240_mgp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: COX3
locus tag: D240_mgp07
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9405,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHAFHMVDPSPWPLTGATAALLMTSGLAIWFHYHTVILLTIGLILTLLTMYQWWRDVVREGTFQGHHTAPVQKGLRYGMILFITSEVLFFFGFFWAFYHSSLAPTPELGGCWPPTGIVPLDPFEVPLLNTAVLLASGVTVTWAHHSLMEGNHKETTQALIFTVLLGLYFTALQAMEYYEAPFTIADSVYGATFFVATGFHGLHVIIGSTFLLICLLRQAQYHFTSNHHFGFEASAWYWHFVDVVWLFLYVSIYWWGS
SIO_010081: D240_mgp07
subclass of: SO_0000673
so part of: D240_mgp07
location: 8622..9405
location: region:8622-9405:1
so has part: feature:8622-9405:1:exon

YP_006884103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8622-9405:1:exon

D240_mgt15
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt15
so part of: sequence
location: 9406..9475
location: region:9406-9475:1
so has part: feature:9406-9475:1:exon
subclass of: SO_0000663

79566736
type: Gene
SIO_000068: ncbigene

position:9406:1
position: 9406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9475:1
position: 9475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9406-9475:1:exon

D240_mgt15
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt15
product: tRNA-Gly
anticodon: (pos:9437..9439,aa:Gly,seq:tcc)
SIO_010081: D240_mgt15
subclass of: SO_0000673
so part of: D240_mgt15
location: 9406..9475
location: region:9406-9475:1
so has part: feature:9406-9475:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9406-9475:1:exon

D240_mgp06
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: ND3
locus tag: D240_mgp06
so part of: sequence
location: 9477..9822
location: region:9477-9822:1
so has part: feature:9477-9822:1:exon
subclass of: SO_0000010

13826017
type: Gene
SIO_000068: ncbigene

position:9477:1
position: 9477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9822:1
position: 9822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9477-9822:1:exon

D240_mgp06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: ND3
locus tag: D240_mgp06
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9822,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLLIVMIISTALPIILMLLGFWLPNLNPDNEKVSPYECGFDPLGSARLPFSLKFFLVAILFLLFDLEIAILLPLPWALQYDTPTTAFLIALLILILLTLGLIYEWLQGGLEWAE
SIO_010081: D240_mgp06
subclass of: SO_0000673
so part of: D240_mgp06
location: 9477..9822
location: region:9477-9822:1
so has part: feature:9477-9822:1:exon

YP_006884104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9477-9822:1:exon

D240_mgt16
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt16
so part of: sequence
location: 9823..9891
location: region:9823-9891:1
so has part: feature:9823-9891:1:exon
subclass of: SO_0000663

79566737
type: Gene
SIO_000068: ncbigene

position:9823:1
position: 9823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9891:1
position: 9891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9823-9891:1:exon

D240_mgt16
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt16
product: tRNA-Arg
anticodon: (pos:9853..9855,aa:Arg,seq:tcg)
SIO_010081: D240_mgt16
subclass of: SO_0000673
so part of: D240_mgt16
location: 9823..9891
location: region:9823-9891:1
so has part: feature:9823-9891:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9823-9891:1:exon

D240_mgp05
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: ND4L
locus tag: D240_mgp05
so part of: sequence
location: 9892..10188
location: region:9892-10188:1
so has part: feature:9892-10188:1:exon
subclass of: SO_0000010

13826018
type: Gene
SIO_000068: ncbigene

position:9892:1
position: 9892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10188:1
position: 10188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9892-10188:1:exon

D240_mgp05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: ND4L
locus tag: D240_mgp05
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MTPTLFSIVSAFYSSLMGLALNRSHLILALLCLEGAMLSVFLMLSMWSAFQGPYSIAGTPLILLALAACEAGTGLALMVATARTHGADHLKSLNLLQC
SIO_010081: D240_mgp05
subclass of: SO_0000673
so part of: D240_mgp05
location: 9892..10188
location: region:9892-10188:1
so has part: feature:9892-10188:1:exon

YP_006884105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9892-10188:1:exon

D240_mgp04
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: ND4
locus tag: D240_mgp04
so part of: sequence
location: 10182..11565
location: region:10182-11565:1
so has part: feature:10182-11565:1:exon
subclass of: SO_0000010

13826019
type: Gene
SIO_000068: ncbigene

position:10182:1
position: 10182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11565:1
position: 11565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10182-11565:1:exon

D240_mgp04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: ND4
locus tag: D240_mgp04
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11565,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKILIPTIMLIPTTWLISLPLLWTMPLIYTTLIACASLSFLKWNSISGWSFINLYMTIDSISAPLLVLSCWLLPLMILASQNHMLHEPLQRQRVYLILLMILQTFLLLTFMASELIMFYVMFEATLIPTLIIITRWGNQAERLQAGTYFLFYTLAGSLPLLIALLLINKNMMTSSIVLLNFFSTDFSSNSYASTLWWAASLFAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMLRMIPILPPLAKPLIYPFIILALWGIIMTGMICLRQSDLKSLIAYSSVSHMGLVISGILIQTPWGLTGAITLMIAHGLTSSLLFCLANTNYERTHSRTMLLARGMQTILPLFGLWWLLANLTNLALPPSINLMGELPIIMATFNWAGLTILLTGIGTLITATYSLYMYMMTQHGQISPQTTMMEPAHTREHLLISLHLIPSFLLIMKPELIWGWFC
SIO_010081: D240_mgp04
subclass of: SO_0000673
so part of: D240_mgp04
location: 10182..11565
location: region:10182-11565:1
so has part: feature:10182-11565:1:exon

YP_006884106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10182-11565:1:exon

D240_mgt17
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt17
so part of: sequence
location: 11566..11634
location: region:11566-11634:1
so has part: feature:11566-11634:1:exon
subclass of: SO_0000663

79566738
type: Gene
SIO_000068: ncbigene

position:11566:1
position: 11566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11634:1
position: 11634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11566-11634:1:exon

D240_mgt17
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt17
product: tRNA-His
anticodon: (pos:11596..11598,aa:His,seq:gtg)
SIO_010081: D240_mgt17
subclass of: SO_0000673
so part of: D240_mgt17
location: 11566..11634
location: region:11566-11634:1
so has part: feature:11566-11634:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11566-11634:1:exon

D240_mgt18
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt18
so part of: sequence
location: 11635..11703
location: region:11635-11703:1
so has part: feature:11635-11703:1:exon
subclass of: SO_0000663

79566753
type: Gene
SIO_000068: ncbigene

position:11635:1
position: 11635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11703:1
position: 11703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11635-11703:1:exon

D240_mgt18
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt18
product: tRNA-Ser
anticodon: (pos:11661..11663,aa:Ser,seq:gct)
codon recognized: AGY
SIO_010081: D240_mgt18
subclass of: SO_0000673
so part of: D240_mgt18
location: 11635..11703
location: region:11635-11703:1
so has part: feature:11635-11703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11635-11703:1:exon

D240_mgt19
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt19
so part of: sequence
location: 11704..11772
location: region:11704-11772:1
so has part: feature:11704-11772:1:exon
subclass of: SO_0000663

79566754
type: Gene
SIO_000068: ncbigene

position:11704:1
position: 11704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11772:1
position: 11772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11704-11772:1:exon

D240_mgt19
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt19
product: tRNA-Leu
anticodon: (pos:11734..11736,aa:Leu,seq:tag)
codon recognized: CUN
SIO_010081: D240_mgt19
subclass of: SO_0000673
so part of: D240_mgt19
location: 11704..11772
location: region:11704-11772:1
so has part: feature:11704-11772:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11704-11772:1:exon

D240_mgp03
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: ND5
locus tag: D240_mgp03
so part of: sequence
location: 11773..13608
location: region:11773-13608:1
so has part: feature:11773-13608:1:exon
subclass of: SO_0000010

13826020
type: Gene
SIO_000068: ncbigene

position:11773:1
position: 11773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13608:1
position: 13608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11773-13608:1:exon

D240_mgp03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: ND5
locus tag: D240_mgp03
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MTQQSVMLSSSLLIFFILLAPLALALVPSLITPHWHKFYAKSAVKLAFFISLLPLFLFMDQGIEIVSTNYQWMAINSFTFNIAFKFDFLSITFMSIALFVTWSILDFAAWYMHEDPYINQFFKYLLLFLTAMMVLTSANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGLILAISWFTTNFNTLDIQQLFILNTNESSIIPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLLRLHPLLQNNETALTLCLLLGAITTVFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPLLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLNMALPMTTSCLLIGSLALSGAPFLAGFFSKDAIIEAMNSSFLNAWALTLTLIATSFTAAYSLRIIFYVSMNFPRYPALTPILEAQQASTPIMRLAIGSVVAGFLLILNIPPPPPQVMTMPTSAKLAAIGVTIVGLFTAAELSNITNKQLKTFPYLTPYNFSNMLAYFQSTTHRLLPTLNLKWAQLLATHLIDVIWLEKSGPKSSMKINTTFSTFITNSQQGMIKTYLTLFFMSTATFLMFLLLN
SIO_010081: D240_mgp03
subclass of: SO_0000673
so part of: D240_mgp03
location: 11773..13608
location: region:11773-13608:1
so has part: feature:11773-13608:1:exon

YP_006884107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11773-13608:1:exon

D240_mgp02
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: ND6
locus tag: D240_mgp02
so part of: sequence
location: complement(13597..14109)
location: region:13597-14109:-1
so has part: feature:13597-14109:-1:exon
subclass of: SO_0000010

13826021
type: Gene
SIO_000068: ncbigene

position:13597:-1
position: 13597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14109:-1
position: 14109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13597-14109:-1:exon

D240_mgp02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: ND6
locus tag: D240_mgp02
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MSFIFFTLLVGFLVSLIGVASNPAPYFAALGLVFGAGIGCGILIWLGNSFLSLILFLIYLGGMLVVFGYSAALAAEPYPGGWEDWSVLLYSLLLLGAGVGIGWAVVGGWDVFDSASFLGGTILGELSGVGGMYWCGGFILVLVGWSLLLALFVVLEVTRGGVRGAMRSIE
SIO_010081: D240_mgp02
subclass of: SO_0000673
so part of: D240_mgp02
location: complement(13597..14109)
location: region:13597-14109:-1
so has part: feature:13597-14109:-1:exon

YP_006884108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13597-14109:-1:exon

D240_mgt20
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt20
so part of: sequence
location: complement(14110..14178)
location: region:14110-14178:-1
so has part: feature:14110-14178:-1:exon
subclass of: SO_0000663

79566739
type: Gene
SIO_000068: ncbigene

position:14110:-1
position: 14110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14178:-1
position: 14178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14110-14178:-1:exon

D240_mgt20
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt20
product: tRNA-Glu
anticodon: (pos:complement(14146..14148),aa:Glu,seq:ttc)
SIO_010081: D240_mgt20
subclass of: SO_0000673
so part of: D240_mgt20
location: complement(14110..14178)
location: region:14110-14178:-1
so has part: feature:14110-14178:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14110-14178:-1:exon

D240_mgp01
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
gene: CYTB
locus tag: D240_mgp01
so part of: sequence
location: 14181..15324
location: region:14181-15324:1
so has part: feature:14181-15324:1:exon
subclass of: SO_0000010

13826022
type: Gene
SIO_000068: ncbigene

position:14181:1
position: 14181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15324:1
position: 15324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14181-15324:1:exon

D240_mgp01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7888
gene: CYTB
locus tag: D240_mgp01
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:15324,aa:TERM)
transl table: 2
product: cytochrome b
translation: MATNIRKTHPLLKIVNNSLIDLPTPSNISAWWNFGSLLGFCLITQILTGLFLAMHYTADTSTAFSSIAHIARDVNYGWLLRNIHANGASMFFICIYIHIARGIYYGSFLYTETWNIGVVLFLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYLGDTLVQWIWGGFSVDNATLTRFFAFHFLLPFIISAMTAVHFLFLHETGSNNPTGLNSNLDKISFHPYFTMKDLLGFLMLASFLCLLALFSPNLLGDPENFTPANPLVTPTHIKPEWYFLFAYAILRSIPNKLGGVLALMASILILFIIPFLHRAKQRTMSYRPLSQFMFWLLTADMLILTWIGGQPVEHPFILIGQIASATYFLLFLLLFPLITSLENKLLYKY
SIO_010081: D240_mgp01
subclass of: SO_0000673
so part of: D240_mgp01
location: 14181..15324
location: region:14181-15324:1
so has part: feature:14181-15324:1:exon

YP_006884109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14181-15324:1:exon

D240_mgt21
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt21
so part of: sequence
location: 15325..15396
location: region:15325-15396:1
so has part: feature:15325-15396:1:exon
subclass of: SO_0000663

79566740
type: Gene
SIO_000068: ncbigene

position:15325:1
position: 15325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15396:1
position: 15396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15325-15396:1:exon

D240_mgt21
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt21
product: tRNA-Thr
anticodon: (pos:15356..15358,aa:Thr,seq:tgt)
SIO_010081: D240_mgt21
subclass of: SO_0000673
so part of: D240_mgt21
location: 15325..15396
location: region:15325-15396:1
so has part: feature:15325-15396:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15325-15396:1:exon

D240_mgt22
type: Gene
subclass of: SO_0000704
RO_0002162: 7888
locus tag: D240_mgt22
so part of: sequence
location: complement(15399..15468)
location: region:15399-15468:-1
so has part: feature:15399-15468:-1:exon
subclass of: SO_0000663

79566755
type: Gene
SIO_000068: ncbigene

position:15399:-1
position: 15399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15468:-1
position: 15468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15399-15468:-1:exon

D240_mgt22
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7888
locus tag: D240_mgt22
product: tRNA-Pro
anticodon: (pos:complement(15435..15437),aa:Pro,seq:tgg)
SIO_010081: D240_mgt22
subclass of: SO_0000673
so part of: D240_mgt22
location: complement(15399..15468)
location: region:15399-15468:-1
so has part: feature:15399-15468:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15399-15468:-1:exon

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 7888
note: control region
so part of: sequence
location: 15469..16657
location: region:15469-16657:1
so has part: feature:15469-16657:1:region

position:15469:1
position: 15469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15469-16657:1:region