Scyliorhinus canicula chromosome 24, sScyCan1.1, whole genome shotgun sequence.
type: Entry
definition: Scyliorhinus canicula chromosome 24, sScyCan1.1, whole genome shotgun sequence.
sequence version: NC_052169.1
sequence date: 2021-01-06
sequence: sequence
division: CON
label: NC_052169.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA688266
dblink: SAMEA994730
keyword: WGS
keyword: RefSeq
source: Scyliorhinus canicula (smaller spotted catshark)
organism: Scyliorhinus canicula
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Carcharhiniformes; Scyliorhinidae; Scyliorhinus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR744053.1.\nAssembly name: sScyCan1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the SC on 2020/12/17. The\noriginal whole-genome shotgun project has the accession\nCACTIT000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Scyliorhinus canicula Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 27315460
topology: linear
so has quality: SO_0000987
location: 1..27315460
location: region:1-27315460:1
RO_0002162: 7830

NC_052169
type: RefSeq
SIO_000068: refseq

PRJNA688266
type: BioProject
SIO_000068: bioproject

SAMEA994730
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27315460:1
position: 27315460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-27315460:1:source
so part of: sequence
organism: Scyliorhinus canicula
mol type: genomic DNA
chromosome: 24

7830
type: Taxonomy
SIO_000068: taxonomy

LOC119956843
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956843
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9297..162903)
location: region:9297-162903:-1
so has part: feature:9297-162903:-1:exon
subclass of: SO_0000010

119956843
type: Gene
SIO_000068: ncbigene

position:9297:-1
position: 9297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162903:-1
position: 162903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9297-162903:-1:exon

LOC119956843
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956843
product: leucine-rich repeat-containing protein 49, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038784326.1
SIO_010081: LOC119956843
subclass of: SO_0000673
so part of: LOC119956843
location: complement(join(9297..10370,26205..26358,53779..53888,54273..54458,59968..60205,65087..65268,70792..70875,75812..75959,90519..90580,116548..116691,122904..122970,147048..147251,149895..150000,155878..155965,160505..160576,162787..162903))
location: region:9297-162903:-1
so has part: feature:162787-162903:-1:exon
so has part: feature:160505-160576:-1:exon
so has part: feature:155878-155965:-1:exon
so has part: feature:149895-150000:-1:exon
so has part: feature:147048-147251:-1:exon
so has part: feature:122904-122970:-1:exon
so has part: feature:116548-116691:-1:exon
so has part: feature:90519-90580:-1:exon
so has part: feature:75812-75959:-1:exon
so has part: feature:70792-70875:-1:exon
so has part: feature:65087-65268:-1:exon
so has part: feature:59968-60205:-1:exon
so has part: feature:54273-54458:-1:exon
so has part: feature:53779-53888:-1:exon
so has part: feature:26205-26358:-1:exon
so has part: feature:9297-10370:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162787-162903:-1:exon

position:162787:-1
position: 162787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:160505-160576:-1:exon

position:160505:-1
position: 160505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160576:-1
position: 160576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:155878-155965:-1:exon

position:155878:-1
position: 155878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155965:-1
position: 155965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:149895-150000:-1:exon

position:149895:-1
position: 149895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150000:-1
position: 150000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:147048-147251:-1:exon

position:147048:-1
position: 147048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147251:-1
position: 147251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:122904-122970:-1:exon

position:122904:-1
position: 122904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122970:-1
position: 122970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:116548-116691:-1:exon

position:116548:-1
position: 116548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116691:-1
position: 116691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:90519-90580:-1:exon

position:90519:-1
position: 90519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90580:-1
position: 90580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:75812-75959:-1:exon

position:75812:-1
position: 75812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75959:-1
position: 75959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:70792-70875:-1:exon

position:70792:-1
position: 70792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70875:-1
position: 70875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:65087-65268:-1:exon

position:65087:-1
position: 65087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65268:-1
position: 65268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:59968-60205:-1:exon

position:59968:-1
position: 59968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60205:-1
position: 60205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:54273-54458:-1:exon

position:54273:-1
position: 54273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54458:-1
position: 54458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:53779-53888:-1:exon

position:53779:-1
position: 53779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53888:-1
position: 53888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:26205-26358:-1:exon

position:26205:-1
position: 26205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26358:-1
position: 26358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9297-10370:-1:exon

position:10370:-1
position: 10370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119956843
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956843
product: leucine-rich repeat-containing protein 49, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038784327.1
SIO_010081: LOC119956843
subclass of: SO_0000673
so part of: LOC119956843
location: complement(join(9297..10370,26205..26358,53779..53888,54273..54458,59968..60205,65087..65268,70792..70875,75812..75959,90519..90580,116548..116691,122904..122970,149895..150000,153218..153391,155878..155965,160505..160576,162787..162903))
location: region:9297-162903:-1
so has part: feature:162787-162903:-1:exon
so has part: feature:160505-160576:-1:exon
so has part: feature:155878-155965:-1:exon
so has part: feature:153218-153391:-1:exon
so has part: feature:149895-150000:-1:exon
so has part: feature:122904-122970:-1:exon
so has part: feature:116548-116691:-1:exon
so has part: feature:90519-90580:-1:exon
so has part: feature:75812-75959:-1:exon
so has part: feature:70792-70875:-1:exon
so has part: feature:65087-65268:-1:exon
so has part: feature:59968-60205:-1:exon
so has part: feature:54273-54458:-1:exon
so has part: feature:53779-53888:-1:exon
so has part: feature:26205-26358:-1:exon
so has part: feature:9297-10370:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162787-162903:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160505-160576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155878-155965:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153218-153391:-1:exon

position:153218:-1
position: 153218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153391:-1
position: 153391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:149895-150000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122904-122970:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116548-116691:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90519-90580:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:75812-75959:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:70792-70875:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:65087-65268:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:59968-60205:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:54273-54458:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53779-53888:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:26205-26358:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9297-10370:-1:exon

LOC119956843
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956843
product: leucine-rich repeat-containing protein 49, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_038784325.1
SIO_010081: LOC119956843
subclass of: SO_0000673
so part of: LOC119956843
location: complement(join(9297..10370,26205..26358,53779..53888,54273..54458,59968..60205,65087..65268,70792..70875,75812..75959,90519..90580,116548..116691,122904..122970,147048..147251,149895..150000,153218..153391,155878..155965,160505..160576,162787..162903))
location: region:9297-162903:-1
so has part: feature:162787-162903:-1:exon
so has part: feature:160505-160576:-1:exon
so has part: feature:155878-155965:-1:exon
so has part: feature:153218-153391:-1:exon
so has part: feature:149895-150000:-1:exon
so has part: feature:147048-147251:-1:exon
so has part: feature:122904-122970:-1:exon
so has part: feature:116548-116691:-1:exon
so has part: feature:90519-90580:-1:exon
so has part: feature:75812-75959:-1:exon
so has part: feature:70792-70875:-1:exon
so has part: feature:65087-65268:-1:exon
so has part: feature:59968-60205:-1:exon
so has part: feature:54273-54458:-1:exon
so has part: feature:53779-53888:-1:exon
so has part: feature:26205-26358:-1:exon
so has part: feature:9297-10370:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162787-162903:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160505-160576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155878-155965:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153218-153391:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149895-150000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147048-147251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:122904-122970:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:116548-116691:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90519-90580:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:75812-75959:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:70792-70875:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:65087-65268:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:59968-60205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:54273-54458:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53779-53888:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:26205-26358:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9297-10370:-1:exon

LOC119956843
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956843
product: leucine-rich repeat-containing protein 49, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038784328.1
SIO_010081: LOC119956843
subclass of: SO_0000673
so part of: LOC119956843
location: complement(join(9297..10370,26205..26358,53779..53888,54273..54458,59968..60205,65087..65268,70792..70875,75812..75959,90519..90580,116548..116691,122904..122970,147048..147251,149895..150000,153218..153391,160505..160576))
location: region:9297-160576:-1
so has part: feature:160505-160576:-1:exon
so has part: feature:153218-153391:-1:exon
so has part: feature:149895-150000:-1:exon
so has part: feature:147048-147251:-1:exon
so has part: feature:122904-122970:-1:exon
so has part: feature:116548-116691:-1:exon
so has part: feature:90519-90580:-1:exon
so has part: feature:75812-75959:-1:exon
so has part: feature:70792-70875:-1:exon
so has part: feature:65087-65268:-1:exon
so has part: feature:59968-60205:-1:exon
so has part: feature:54273-54458:-1:exon
so has part: feature:53779-53888:-1:exon
so has part: feature:26205-26358:-1:exon
so has part: feature:9297-10370:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160505-160576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:153218-153391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:149895-150000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147048-147251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122904-122970:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:116548-116691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90519-90580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:75812-75959:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:70792-70875:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:65087-65268:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:59968-60205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:54273-54458:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:53779-53888:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:26205-26358:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9297-10370:-1:exon

LOC119956843
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956843
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 49 isoform X2
translation: MLPSKYRARLLGNPINTCSLQLTVQASTVGDRLSQKQQVDCRLNKELLPSHNKILNVDGDKNFLCKPGDHVIFSEIPSTPGIPVVYRTPEERAEHSDRLNLDRRNLTVCPILEGEQQLRLLNFQHNLITQIQHLSNLRRLIFLDLYNNRIEEISGLSSLKSLRVLMLGKNRIKNISNLESLTDLDVLDLHANQICRMEHINHLTELRVLNLAGNFIVHVENMSGLDSLTELNLRRNRIESVRDADTLPHLQRFFLSFNNISRFEDIACLSDSLSLSEVTLDGNPIAQESWYKHTILRHMLQLRQLDMKKITEEERRMASVIARKEDDKKREIHKQAILKEKRRLAISNASRQWEIQQTVAAIKEAQQEQMKPIGTANNISIQKPCHISEHEHGLWPNESRSPDGILTCTVQGLSIADSHLAELEGDTLHLYGFGALESLDRNWGVQTAGTVTTISFMFIDFDEIVTVLPRLRIKFPNILHLKFQDTNLHKLQQFNALALGRRLDQLTVSSQGNPVVNFTLWKYYVLFRLNHFCLQKINNMEVTPMDIVMGERLFGILARVAASHLPQPRLLSLLGEIKKKQLHFILEGKGKKSGVTLEEVKDNIKLGGETVGRAILNYSNKDITSEQFKETKTFCQVYVQELVKDAALIDVKNESLQKLWPQIFIELVRDCVIQMSNKNSHMKLCLKNIMDQK
SIO_010081: LOC119956843
subclass of: SO_0000673
so part of: LOC119956843
location: complement(join(10176..10370,26205..26358,53779..53888,54273..54458,59968..60205,65087..65268,70792..70875,75812..75959,90519..90580,116548..116691,122904..122970,147048..147251,149895..150000,155878..155965,160505..160576,162787..162828))
location: region:10176-162828:-1
so has part: feature:162787-162828:-1:exon
so has part: feature:160505-160576:-1:exon
so has part: feature:155878-155965:-1:exon
so has part: feature:149895-150000:-1:exon
so has part: feature:147048-147251:-1:exon
so has part: feature:122904-122970:-1:exon
so has part: feature:116548-116691:-1:exon
so has part: feature:90519-90580:-1:exon
so has part: feature:75812-75959:-1:exon
so has part: feature:70792-70875:-1:exon
so has part: feature:65087-65268:-1:exon
so has part: feature:59968-60205:-1:exon
so has part: feature:54273-54458:-1:exon
so has part: feature:53779-53888:-1:exon
so has part: feature:26205-26358:-1:exon
so has part: feature:10176-10370:-1:exon

XP_038640254.1
type: Protein
SIO_000068: ncbiprotein

position:10176:-1
position: 10176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162828:-1
position: 162828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162787-162828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160505-160576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155878-155965:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149895-150000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147048-147251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122904-122970:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116548-116691:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90519-90580:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:75812-75959:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:70792-70875:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:65087-65268:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:59968-60205:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:54273-54458:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53779-53888:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:26205-26358:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10176-10370:-1:exon

LOC119956843
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956843
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 49 isoform X3
translation: MLPSKYRARLLGNPINTCSLQLTVQASTVGDRLSQKQQVDCRLNKELLPSHNKILNVDGDKNFLCKPDTICHDDPPHYYSESMSRVTAGDMPSHVPLSVKCKSRQGSRSAVPPPSHSQGTLPYLPGDHVIFSEIPSTPGIPVVYRTPEERAEHSDRLNLDRIKNISNLESLTDLDVLDLHANQICRMEHINHLTELRVLNLAGNFIVHVENMSGLDSLTELNLRRNRIESVRDADTLPHLQRFFLSFNNISRFEDIACLSDSLSLSEVTLDGNPIAQESWYKHTILRHMLQLRQLDMKKITEEERRMASVIARKEDDKKREIHKQAILKEKRRLAISNASRQWEIQQTVAAIKEAQQEQMKPIGTANNISIQKPCHISEHEHGLWPNESRSPDGILTCTVQGLSIADSHLAELEGDTLHLYGFGALESLDRNWGVQTAGTVTTISFMFIDFDEIVTVLPRLRIKFPNILHLKFQDTNLHKLQQFNALALGRRLDQLTVSSQGNPVVNFTLWKYYVLFRLNHFCLQKINNMEVTPMDIVMGERLFGILARVAASHLPQPRLLSLLGEIKKKQLHFILEGKGKKSGVTLEEVKDNIKLGGETVGRAILNYSNKDITSEQFKETKTFCQVYVQELVKDAALIDVKNESLQKLWPQIFIELVRDCVIQMSNKNSHMKLCLKNIMDQK
SIO_010081: LOC119956843
subclass of: SO_0000673
so part of: LOC119956843
location: complement(join(10176..10370,26205..26358,53779..53888,54273..54458,59968..60205,65087..65268,70792..70875,75812..75959,90519..90580,116548..116691,122904..122970,149895..150000,153218..153391,155878..155965,160505..160576,162787..162828))
location: region:10176-162828:-1
so has part: feature:162787-162828:-1:exon
so has part: feature:160505-160576:-1:exon
so has part: feature:155878-155965:-1:exon
so has part: feature:153218-153391:-1:exon
so has part: feature:149895-150000:-1:exon
so has part: feature:122904-122970:-1:exon
so has part: feature:116548-116691:-1:exon
so has part: feature:90519-90580:-1:exon
so has part: feature:75812-75959:-1:exon
so has part: feature:70792-70875:-1:exon
so has part: feature:65087-65268:-1:exon
so has part: feature:59968-60205:-1:exon
so has part: feature:54273-54458:-1:exon
so has part: feature:53779-53888:-1:exon
so has part: feature:26205-26358:-1:exon
so has part: feature:10176-10370:-1:exon

XP_038640255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162787-162828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160505-160576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155878-155965:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153218-153391:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149895-150000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122904-122970:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116548-116691:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90519-90580:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:75812-75959:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:70792-70875:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:65087-65268:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:59968-60205:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:54273-54458:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53779-53888:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:26205-26358:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10176-10370:-1:exon

LOC119956843
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956843
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 49 isoform X1
translation: MLPSKYRARLLGNPINTCSLQLTVQASTVGDRLSQKQQVDCRLNKELLPSHNKILNVDGDKNFLCKPDTICHDDPPHYYSESMSRVTAGDMPSHVPLSVKCKSRQGSRSAVPPPSHSQGTLPYLPGDHVIFSEIPSTPGIPVVYRTPEERAEHSDRLNLDRRNLTVCPILEGEQQLRLLNFQHNLITQIQHLSNLRRLIFLDLYNNRIEEISGLSSLKSLRVLMLGKNRIKNISNLESLTDLDVLDLHANQICRMEHINHLTELRVLNLAGNFIVHVENMSGLDSLTELNLRRNRIESVRDADTLPHLQRFFLSFNNISRFEDIACLSDSLSLSEVTLDGNPIAQESWYKHTILRHMLQLRQLDMKKITEEERRMASVIARKEDDKKREIHKQAILKEKRRLAISNASRQWEIQQTVAAIKEAQQEQMKPIGTANNISIQKPCHISEHEHGLWPNESRSPDGILTCTVQGLSIADSHLAELEGDTLHLYGFGALESLDRNWGVQTAGTVTTISFMFIDFDEIVTVLPRLRIKFPNILHLKFQDTNLHKLQQFNALALGRRLDQLTVSSQGNPVVNFTLWKYYVLFRLNHFCLQKINNMEVTPMDIVMGERLFGILARVAASHLPQPRLLSLLGEIKKKQLHFILEGKGKKSGVTLEEVKDNIKLGGETVGRAILNYSNKDITSEQFKETKTFCQVYVQELVKDAALIDVKNESLQKLWPQIFIELVRDCVIQMSNKNSHMKLCLKNIMDQK
SIO_010081: LOC119956843
subclass of: SO_0000673
so part of: LOC119956843
location: complement(join(10176..10370,26205..26358,53779..53888,54273..54458,59968..60205,65087..65268,70792..70875,75812..75959,90519..90580,116548..116691,122904..122970,147048..147251,149895..150000,153218..153391,155878..155965,160505..160576,162787..162828))
location: region:10176-162828:-1
so has part: feature:162787-162828:-1:exon
so has part: feature:160505-160576:-1:exon
so has part: feature:155878-155965:-1:exon
so has part: feature:153218-153391:-1:exon
so has part: feature:149895-150000:-1:exon
so has part: feature:147048-147251:-1:exon
so has part: feature:122904-122970:-1:exon
so has part: feature:116548-116691:-1:exon
so has part: feature:90519-90580:-1:exon
so has part: feature:75812-75959:-1:exon
so has part: feature:70792-70875:-1:exon
so has part: feature:65087-65268:-1:exon
so has part: feature:59968-60205:-1:exon
so has part: feature:54273-54458:-1:exon
so has part: feature:53779-53888:-1:exon
so has part: feature:26205-26358:-1:exon
so has part: feature:10176-10370:-1:exon

XP_038640253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162787-162828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160505-160576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155878-155965:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153218-153391:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149895-150000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147048-147251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:122904-122970:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:116548-116691:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90519-90580:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:75812-75959:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:70792-70875:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:65087-65268:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:59968-60205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:54273-54458:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53779-53888:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:26205-26358:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10176-10370:-1:exon

LOC119956843
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956843
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 49 isoform X4
translation: MSRVTAGDMPSHVPLSVKCKSRQGSRSAVPPPSHSQGTLPYLPGDHVIFSEIPSTPGIPVVYRTPEERAEHSDRLNLDRRNLTVCPILEGEQQLRLLNFQHNLITQIQHLSNLRRLIFLDLYNNRIEEISGLSSLKSLRVLMLGKNRIKNISNLESLTDLDVLDLHANQICRMEHINHLTELRVLNLAGNFIVHVENMSGLDSLTELNLRRNRIESVRDADTLPHLQRFFLSFNNISRFEDIACLSDSLSLSEVTLDGNPIAQESWYKHTILRHMLQLRQLDMKKITEEERRMASVIARKEDDKKREIHKQAILKEKRRLAISNASRQWEIQQTVAAIKEAQQEQMKPIGTANNISIQKPCHISEHEHGLWPNESRSPDGILTCTVQGLSIADSHLAELEGDTLHLYGFGALESLDRNWGVQTAGTVTTISFMFIDFDEIVTVLPRLRIKFPNILHLKFQDTNLHKLQQFNALALGRRLDQLTVSSQGNPVVNFTLWKYYVLFRLNHFCLQKINNMEVTPMDIVMGERLFGILARVAASHLPQPRLLSLLGEIKKKQLHFILEGKGKKSGVTLEEVKDNIKLGGETVGRAILNYSNKDITSEQFKETKTFCQVYVQELVKDAALIDVKNESLQKLWPQIFIELVRDCVIQMSNKNSHMKLCLKNIMDQK
SIO_010081: LOC119956843
subclass of: SO_0000673
so part of: LOC119956843
location: complement(join(10176..10370,26205..26358,53779..53888,54273..54458,59968..60205,65087..65268,70792..70875,75812..75959,90519..90580,116548..116691,122904..122970,147048..147251,149895..150000,153218..153347))
location: region:10176-153347:-1
so has part: feature:153218-153347:-1:exon
so has part: feature:149895-150000:-1:exon
so has part: feature:147048-147251:-1:exon
so has part: feature:122904-122970:-1:exon
so has part: feature:116548-116691:-1:exon
so has part: feature:90519-90580:-1:exon
so has part: feature:75812-75959:-1:exon
so has part: feature:70792-70875:-1:exon
so has part: feature:65087-65268:-1:exon
so has part: feature:59968-60205:-1:exon
so has part: feature:54273-54458:-1:exon
so has part: feature:53779-53888:-1:exon
so has part: feature:26205-26358:-1:exon
so has part: feature:10176-10370:-1:exon

XP_038640256.1
type: Protein
SIO_000068: ncbiprotein

position:153347:-1
position: 153347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153218-153347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:149895-150000:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147048-147251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122904-122970:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:116548-116691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90519-90580:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:75812-75959:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:70792-70875:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:65087-65268:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:59968-60205:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:54273-54458:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:53779-53888:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:26205-26358:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10176-10370:-1:exon

larp6a
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: larp6a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 202701..228690
location: region:202701-228690:1
so has part: feature:202701-228690:1:exon
subclass of: SO_0000010

119956927
type: Gene
SIO_000068: ncbigene

position:202701:1
position: 202701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228690:1
position: 228690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202701-228690:1:exon

larp6a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: larp6a
product: La ribonucleoprotein 6, translational regulator a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_038784505.1
SIO_010081: larp6a
subclass of: SO_0000673
so part of: larp6a
location: join(202701..202908,212899..213985,228494..228690)
location: region:202701-228690:1
so has part: feature:202701-202908:1:exon
so has part: feature:212899-213985:1:exon
so has part: feature:228494-228690:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202701-202908:1:exon

position:202908:1
position: 202908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:212899-213985:1:exon

position:212899:1
position: 212899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213985:1
position: 213985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:228494-228690:1:exon

position:228494:1
position: 228494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

larp6a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: larp6a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 6a
translation: MTPDPELMQNLISQIEYYLSDENLEKDAFLLKHVRRNKMGYVSVKLLTSFKKVKHLTRDWQTTAFALKHSQLLELNEEGRKVRRKTPVPVFPSENLPSRMLLVNDMHMCPEFQALNQNQESENSGLQEKVMEYIVKVFGLFGPISSVRVLKPGKELPADVKRLSSRYSQLGMKECVIVEFEDVESAIKAHESLGKTDDGMKVVLIGMKPRKKKVVREKTKEAEDDGKNGSKSKSANKRVEELQYTGEDSSVYSSSDTESNPASPMFSRKLIPNNQLCPNTYQNNHLSPNASPRSSPWTSPRSSPSIQRKNIIPWKSPLTVDAKLSPATSPELGSKWTDYSSDSSNTPSGSPWVQKRKQAQVISHENSPTDSPLLSRKMHSAGGLPQGVVRLPRGPDGTKGFQTFAERKKPLVI
SIO_010081: larp6a
subclass of: SO_0000673
so part of: larp6a
location: join(202753..202908,212899..213984)
location: region:202753-213984:1
so has part: feature:202753-202908:1:exon
so has part: feature:212899-213984:1:exon

XP_038640433.1
type: Protein
SIO_000068: ncbiprotein

position:202753:1
position: 202753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213984:1
position: 213984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202753-202908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212899-213984:1:exon

tm2d3
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: tm2d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(227544..240185)
location: region:227544-240185:-1
so has part: feature:227544-240185:-1:exon
subclass of: SO_0000010

119956928
type: Gene
SIO_000068: ncbigene

position:227544:-1
position: 227544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240185:-1
position: 240185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227544-240185:-1:exon

tm2d3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: tm2d3
product: TM2 domain containing 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_038784510.1
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(227544..229026,230681..230756,233125..233299,237396..237553,240047..240185))
location: region:227544-240185:-1
so has part: feature:240047-240185:-1:exon
so has part: feature:237396-237553:-1:exon
so has part: feature:233125-233299:-1:exon
so has part: feature:230681-230756:-1:exon
so has part: feature:227544-229026:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240047-240185:-1:exon

position:240047:-1
position: 240047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:237396-237553:-1:exon

position:237396:-1
position: 237396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237553:-1
position: 237553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:233125-233299:-1:exon

position:233125:-1
position: 233125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233299:-1
position: 233299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:230681-230756:-1:exon

position:230681:-1
position: 230681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230756:-1
position: 230756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:227544-229026:-1:exon

position:229026:-1
position: 229026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tm2d3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: tm2d3
product: TM2 domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_038784507.1
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(227544..229026,230681..230756,233125..233299,237396..237553,237745..237840,240047..240171))
location: region:227544-240171:-1
so has part: feature:240047-240171:-1:exon
so has part: feature:237745-237840:-1:exon
so has part: feature:237396-237553:-1:exon
so has part: feature:233125-233299:-1:exon
so has part: feature:230681-230756:-1:exon
so has part: feature:227544-229026:-1:exon

position:240171:-1
position: 240171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240047-240171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237745-237840:-1:exon

position:237745:-1
position: 237745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237840:-1
position: 237840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:237396-237553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233125-233299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230681-230756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227544-229026:-1:exon

tm2d3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: tm2d3
product: TM2 domain containing 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038784509.1
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(227544..229026,230681..230756,233125..233299,237396..237553,240014..240128))
location: region:227544-240128:-1
so has part: feature:240014-240128:-1:exon
so has part: feature:237396-237553:-1:exon
so has part: feature:233125-233299:-1:exon
so has part: feature:230681-230756:-1:exon
so has part: feature:227544-229026:-1:exon

position:240128:-1
position: 240128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240014-240128:-1:exon

position:240014:-1
position: 240014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:237396-237553:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:233125-233299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230681-230756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:227544-229026:-1:exon

tm2d3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: tm2d3
product: TM2 domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_038784506.1
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(227544..229026,230681..230756,233125..233299,237396..237553,237745..237840,240014..240128))
location: region:227544-240128:-1
so has part: feature:240014-240128:-1:exon
so has part: feature:237745-237840:-1:exon
so has part: feature:237396-237553:-1:exon
so has part: feature:233125-233299:-1:exon
so has part: feature:230681-230756:-1:exon
so has part: feature:227544-229026:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240014-240128:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237745-237840:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237396-237553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233125-233299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230681-230756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227544-229026:-1:exon

tm2d3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: tm2d3
product: TM2 domain containing 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_038784511.1
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(227544..229026,230681..230756,233125..233299,237396..237553,237745..237840,239514..239758))
location: region:227544-239758:-1
so has part: feature:239514-239758:-1:exon
so has part: feature:237745-237840:-1:exon
so has part: feature:237396-237553:-1:exon
so has part: feature:233125-233299:-1:exon
so has part: feature:230681-230756:-1:exon
so has part: feature:227544-229026:-1:exon

position:239758:-1
position: 239758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239514-239758:-1:exon

position:239514:-1
position: 239514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:237745-237840:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237396-237553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233125-233299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230681-230756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227544-229026:-1:exon

tm2d3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: tm2d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TM2 domain-containing protein 3 isoform X4
translation: MALWKFLEWALILWQLLDVQRGAITTEPSYLADCPSAGRCVKLPPVCMNCPLYWNCTYGKDVSFNCTVKPGVQCTDENKMEQKTFQITMICRFCWQLPPTEYRCKETTKCKTVQCPREYFISNCTTLEHVHCLGNRTFQKKMYCNWTGGYKWSTALALSITLGGFGADRFYLGQWKEGLGKLFSFGGLGIWTLIDVLLIGIGYVGPADGSLYI
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(228861..229026,230681..230756,233125..233299,237396..237553,240047..240113))
location: region:228861-240113:-1
so has part: feature:240047-240113:-1:exon
so has part: feature:237396-237553:-1:exon
so has part: feature:233125-233299:-1:exon
so has part: feature:230681-230756:-1:exon
so has part: feature:228861-229026:-1:exon

XP_038640438.1
type: Protein
SIO_000068: ncbiprotein

position:228861:-1
position: 228861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240113:-1
position: 240113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240047-240113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237396-237553:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:233125-233299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230681-230756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228861-229026:-1:exon

tm2d3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: tm2d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TM2 domain-containing protein 3 isoform X2
translation: MALWKFLEWALILWQLLDVQRGDSLSTKEPDGMLSPKDAVFPSTLGTIRAHLAASITTEPSYLADCPSAGRCVKLPPVCMNCPLYWNCTYGKDVSFNCTVKPGVQCTDENKMEQKTFQITMICRFCWQLPPTEYRCKETTKCKTVQCPREYFISNCTTLEHVHCLGNRTFQKKMYCNWTGGYKWSTALALSITLGGFGADRFYLGQWKEGLGKLFSFGGLGIWTLIDVLLIGIGYVGPADGSLYI
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(228861..229026,230681..230756,233125..233299,237396..237553,237745..237840,240047..240113))
location: region:228861-240113:-1
so has part: feature:240047-240113:-1:exon
so has part: feature:237745-237840:-1:exon
so has part: feature:237396-237553:-1:exon
so has part: feature:233125-233299:-1:exon
so has part: feature:230681-230756:-1:exon
so has part: feature:228861-229026:-1:exon

XP_038640435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240047-240113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237745-237840:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237396-237553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233125-233299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230681-230756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228861-229026:-1:exon

tm2d3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: tm2d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TM2 domain-containing protein 3 isoform X3
translation: MALWKFLEWALILWQLLDVQRGGESGAWGLQRGAITTEPSYLADCPSAGRCVKLPPVCMNCPLYWNCTYGKDVSFNCTVKPGVQCTDENKMEQKTFQITMICRFCWQLPPTEYRCKETTKCKTVQCPREYFISNCTTLEHVHCLGNRTFQKKMYCNWTGGYKWSTALALSITLGGFGADRFYLGQWKEGLGKLFSFGGLGIWTLIDVLLIGIGYVGPADGSLYI
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(228861..229026,230681..230756,233125..233299,237396..237553,240014..240113))
location: region:228861-240113:-1
so has part: feature:240014-240113:-1:exon
so has part: feature:237396-237553:-1:exon
so has part: feature:233125-233299:-1:exon
so has part: feature:230681-230756:-1:exon
so has part: feature:228861-229026:-1:exon

XP_038640437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240014-240113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237396-237553:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:233125-233299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230681-230756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228861-229026:-1:exon

tm2d3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: tm2d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TM2 domain-containing protein 3 isoform X1
translation: MALWKFLEWALILWQLLDVQRGGESGAWGLQRGDSLSTKEPDGMLSPKDAVFPSTLGTIRAHLAASITTEPSYLADCPSAGRCVKLPPVCMNCPLYWNCTYGKDVSFNCTVKPGVQCTDENKMEQKTFQITMICRFCWQLPPTEYRCKETTKCKTVQCPREYFISNCTTLEHVHCLGNRTFQKKMYCNWTGGYKWSTALALSITLGGFGADRFYLGQWKEGLGKLFSFGGLGIWTLIDVLLIGIGYVGPADGSLYI
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(228861..229026,230681..230756,233125..233299,237396..237553,237745..237840,240014..240113))
location: region:228861-240113:-1
so has part: feature:240014-240113:-1:exon
so has part: feature:237745-237840:-1:exon
so has part: feature:237396-237553:-1:exon
so has part: feature:233125-233299:-1:exon
so has part: feature:230681-230756:-1:exon
so has part: feature:228861-229026:-1:exon

XP_038640434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240014-240113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237745-237840:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237396-237553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233125-233299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230681-230756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228861-229026:-1:exon

tm2d3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: tm2d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TM2 domain-containing protein 3 isoform X5
translation: MLSPKDAVFPSTLGTIRAHLAASITTEPSYLADCPSAGRCVKLPPVCMNCPLYWNCTYGKDVSFNCTVKPGVQCTDENKMEQKTFQITMICRFCWQLPPTEYRCKETTKCKTVQCPREYFISNCTTLEHVHCLGNRTFQKKMYCNWTGGYKWSTALALSITLGGFGADRFYLGQWKEGLGKLFSFGGLGIWTLIDVLLIGIGYVGPADGSLYI
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(228861..229026,230681..230756,233125..233299,237396..237553,237745..237811))
location: region:228861-237811:-1
so has part: feature:237745-237811:-1:exon
so has part: feature:237396-237553:-1:exon
so has part: feature:233125-233299:-1:exon
so has part: feature:230681-230756:-1:exon
so has part: feature:228861-229026:-1:exon

XP_038640439.1
type: Protein
SIO_000068: ncbiprotein

position:237811:-1
position: 237811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237745-237811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237396-237553:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:233125-233299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230681-230756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228861-229026:-1:exon

LOC119956929
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 229026..235223
location: region:229026-235223:1
so has part: feature:229026-235223:1:exon
subclass of: SO_0000011

119956929
type: Gene
SIO_000068: ncbigene

position:229026:1
position: 229026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235223:1
position: 235223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229026-235223:1:exon

LOC119956929
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7830
nc RNA class: lncRNA
gene: LOC119956929
product: uncharacterized LOC119956929
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_005458708.1
SIO_010081: LOC119956929
subclass of: SO_0000673
so part of: LOC119956929
location: join(229026..229318,234378..235223)
location: region:229026-235223:1
so has part: feature:229026-229318:1:exon
so has part: feature:234378-235223:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229026-229318:1:exon

position:229318:1
position: 229318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:234378-235223:1:exon

position:234378:1
position: 234378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119956788
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956788
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(246995..302342)
location: region:246995-302342:-1
so has part: feature:246995-302342:-1:exon
subclass of: SO_0000010

119956788
type: Gene
SIO_000068: ncbigene

position:246995:-1
position: 246995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302342:-1
position: 302342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246995-302342:-1:exon

LOC119956788
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956788
product: threonine--tRNA ligase 1, cytoplasmic-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_038784208.1
SIO_010081: LOC119956788
subclass of: SO_0000673
so part of: LOC119956788
location: complement(join(246995..247488,248771..248885,248963..249035,255304..255408,256993..257093,257180..257257,261025..261162,263372..263534,268249..268415,272036..272134,277648..277794,277903..277981,284686..284750,287881..287998,288585..288706,289116..289239,290227..290417,290746..290835,302078..302342))
location: region:246995-302342:-1
so has part: feature:302078-302342:-1:exon
so has part: feature:290746-290835:-1:exon
so has part: feature:290227-290417:-1:exon
so has part: feature:289116-289239:-1:exon
so has part: feature:288585-288706:-1:exon
so has part: feature:287881-287998:-1:exon
so has part: feature:284686-284750:-1:exon
so has part: feature:277903-277981:-1:exon
so has part: feature:277648-277794:-1:exon
so has part: feature:272036-272134:-1:exon
so has part: feature:268249-268415:-1:exon
so has part: feature:263372-263534:-1:exon
so has part: feature:261025-261162:-1:exon
so has part: feature:257180-257257:-1:exon
so has part: feature:256993-257093:-1:exon
so has part: feature:255304-255408:-1:exon
so has part: feature:248963-249035:-1:exon
so has part: feature:248771-248885:-1:exon
so has part: feature:246995-247488:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:302078-302342:-1:exon

position:302078:-1
position: 302078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:290746-290835:-1:exon

position:290746:-1
position: 290746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290835:-1
position: 290835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:290227-290417:-1:exon

position:290227:-1
position: 290227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290417:-1
position: 290417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:289116-289239:-1:exon

position:289116:-1
position: 289116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289239:-1
position: 289239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:288585-288706:-1:exon

position:288585:-1
position: 288585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288706:-1
position: 288706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:287881-287998:-1:exon

position:287881:-1
position: 287881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287998:-1
position: 287998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:284686-284750:-1:exon

position:284686:-1
position: 284686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284750:-1
position: 284750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:277903-277981:-1:exon

position:277903:-1
position: 277903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277981:-1
position: 277981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:277648-277794:-1:exon

position:277648:-1
position: 277648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277794:-1
position: 277794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:272036-272134:-1:exon

position:272036:-1
position: 272036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272134:-1
position: 272134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:268249-268415:-1:exon

position:268249:-1
position: 268249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268415:-1
position: 268415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:263372-263534:-1:exon

position:263372:-1
position: 263372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263534:-1
position: 263534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:261025-261162:-1:exon

position:261025:-1
position: 261025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261162:-1
position: 261162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:257180-257257:-1:exon

position:257180:-1
position: 257180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257257:-1
position: 257257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:256993-257093:-1:exon

position:256993:-1
position: 256993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257093:-1
position: 257093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:255304-255408:-1:exon

position:255304:-1
position: 255304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255408:-1
position: 255408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:248963-249035:-1:exon

position:248963:-1
position: 248963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249035:-1
position: 249035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:248771-248885:-1:exon

position:248771:-1
position: 248771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248885:-1
position: 248885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:246995-247488:-1:exon

position:247488:-1
position: 247488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119956788
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956788
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: threonine--tRNA ligase 1, cytoplasmic-like
translation: MAAVVAFELRLAAQEAELRQLRAATERLQRGTEELVIGPELQCLREENEKLKYRRLHLERSVRAELRRGRSSAQGSGVQTEVDSQQLDRQLKNKKDENSPTGGEAKSIEWSEWPPYVEERFQLYERLKREHDSMLSEQAARDSRIITITLPNNMQIRGESWRTTPYQVACQISRRLAESSIIAKVGDELWDLDRPLEGDTSLQLLNFEDPAARAVYWHSSAHILGEAMERYYGGCLCYGPPIETGFYYDMFLEDRGVSSDQFPYLENICKSIIKDCQPFERLEVSKQTLLEMFKYNKFKVRILNEKIETLTTTVYRCGPLIDLCSGPHVRHTGKIKAMRIYKKSLTYWEGKSNMETLQRIYGISFPDDKMLKEWEQLQEEAKNQDHRKIGQEQELFFFHPLSPGSCFFLPRGASIYNTLTTFIREEYCRRGFTEVVSPNIYNSRLWEMSGYWQHDSENMFSFEVEKEVFALKPMNCPGHCLMFDYRPRSWRELPLRFADFGVLHRNEPTGELTGLTRVRRFEQDDAHIFCTIEQIEEEIRGCLVFLRSVYGVFGFSFQLNLSKRTEVFLGDVNLWNQAEKQLECCLDEFGESWRLSDGDEALPGPKIDIEIKDALDRNHQCATIQLDFQLPIRLNLTYVSKDGMDGSRPVIIHRAVLGSLERMMAILAENYAGKWPFWLSPCQIVVIPVGSGCEEYGRMVCQEFVEAGFMADVDLDPGCLLNKKIRNSQLAQYNFILVVGEREKANNSVNVRTRDNKVHGELSVAATIEKMKRLKQLRRVRAEEEF
SIO_010081: LOC119956788
subclass of: SO_0000673
so part of: LOC119956788
location: complement(join(247340..247488,248771..248885,248963..249035,255304..255408,256993..257093,257180..257257,261025..261162,263372..263534,268249..268415,272036..272134,277648..277794,277903..277981,284686..284750,287881..287998,288585..288706,289116..289239,290227..290417,290746..290835,302078..302314))
location: region:247340-302314:-1
so has part: feature:302078-302314:-1:exon
so has part: feature:290746-290835:-1:exon
so has part: feature:290227-290417:-1:exon
so has part: feature:289116-289239:-1:exon
so has part: feature:288585-288706:-1:exon
so has part: feature:287881-287998:-1:exon
so has part: feature:284686-284750:-1:exon
so has part: feature:277903-277981:-1:exon
so has part: feature:277648-277794:-1:exon
so has part: feature:272036-272134:-1:exon
so has part: feature:268249-268415:-1:exon
so has part: feature:263372-263534:-1:exon
so has part: feature:261025-261162:-1:exon
so has part: feature:257180-257257:-1:exon
so has part: feature:256993-257093:-1:exon
so has part: feature:255304-255408:-1:exon
so has part: feature:248963-249035:-1:exon
so has part: feature:248771-248885:-1:exon
so has part: feature:247340-247488:-1:exon

XP_038640136.1
type: Protein
SIO_000068: ncbiprotein

position:247340:-1
position: 247340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302314:-1
position: 302314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302078-302314:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290746-290835:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290227-290417:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289116-289239:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288585-288706:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287881-287998:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284686-284750:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:277903-277981:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:277648-277794:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:272036-272134:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:268249-268415:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:263372-263534:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:261025-261162:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:257180-257257:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:256993-257093:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:255304-255408:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:248963-249035:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:248771-248885:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:247340-247488:-1:exon

LOC119956823
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 311932..540627
location: region:311932-540627:1
so has part: feature:311932-540627:1:exon
subclass of: SO_0000010

119956823
type: Gene
SIO_000068: ncbigene

position:311932:1
position: 311932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540627:1
position: 540627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311932-540627:1:exon

LOC119956823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956823
product: tight junction protein ZO-1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038784280.1
SIO_010081: LOC119956823
subclass of: SO_0000673
so part of: LOC119956823
location: join(311932..312445,322919..323075,334607..334745,461168..461224,464935..465059,467089..467191,468827..469118,472112..472215,474446..474614,475022..475169,478533..478687,479589..479694,485973..486123,486552..486660,486942..487161,487556..487740,489574..489669,491318..491400,491494..491704,497113..497213,498171..498512,500705..500971,502273..502308,502808..503683,505881..505981,508817..509035,513886..514055,517287..517740,530813..531027,537426..537509,539511..540627)
location: region:311932-540627:1
so has part: feature:311932-312445:1:exon
so has part: feature:322919-323075:1:exon
so has part: feature:334607-334745:1:exon
so has part: feature:461168-461224:1:exon
so has part: feature:464935-465059:1:exon
so has part: feature:467089-467191:1:exon
so has part: feature:468827-469118:1:exon
so has part: feature:472112-472215:1:exon
so has part: feature:474446-474614:1:exon
so has part: feature:475022-475169:1:exon
so has part: feature:478533-478687:1:exon
so has part: feature:479589-479694:1:exon
so has part: feature:485973-486123:1:exon
so has part: feature:486552-486660:1:exon
so has part: feature:486942-487161:1:exon
so has part: feature:487556-487740:1:exon
so has part: feature:489574-489669:1:exon
so has part: feature:491318-491400:1:exon
so has part: feature:491494-491704:1:exon
so has part: feature:497113-497213:1:exon
so has part: feature:498171-498512:1:exon
so has part: feature:500705-500971:1:exon
so has part: feature:502273-502308:1:exon
so has part: feature:502808-503683:1:exon
so has part: feature:505881-505981:1:exon
so has part: feature:508817-509035:1:exon
so has part: feature:513886-514055:1:exon
so has part: feature:517287-517740:1:exon
so has part: feature:530813-531027:1:exon
so has part: feature:537426-537509:1:exon
so has part: feature:539511-540627:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:311932-312445:1:exon

position:312445:1
position: 312445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:322919-323075:1:exon

position:322919:1
position: 322919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323075:1
position: 323075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:334607-334745:1:exon

position:334607:1
position: 334607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334745:1
position: 334745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:461168-461224:1:exon

position:461168:1
position: 461168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461224:1
position: 461224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:464935-465059:1:exon

position:464935:1
position: 464935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465059:1
position: 465059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:467089-467191:1:exon

position:467089:1
position: 467089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467191:1
position: 467191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:468827-469118:1:exon

position:468827:1
position: 468827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469118:1
position: 469118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:472112-472215:1:exon

position:472112:1
position: 472112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472215:1
position: 472215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:474446-474614:1:exon

position:474446:1
position: 474446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474614:1
position: 474614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:475022-475169:1:exon

position:475022:1
position: 475022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475169:1
position: 475169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:478533-478687:1:exon

position:478533:1
position: 478533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478687:1
position: 478687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:479589-479694:1:exon

position:479589:1
position: 479589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479694:1
position: 479694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:485973-486123:1:exon

position:485973:1
position: 485973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486123:1
position: 486123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:486552-486660:1:exon

position:486552:1
position: 486552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486660:1
position: 486660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:486942-487161:1:exon

position:486942:1
position: 486942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487161:1
position: 487161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:487556-487740:1:exon

position:487556:1
position: 487556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487740:1
position: 487740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:489574-489669:1:exon

position:489574:1
position: 489574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489669:1
position: 489669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:491318-491400:1:exon

position:491318:1
position: 491318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491400:1
position: 491400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:491494-491704:1:exon

position:491494:1
position: 491494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491704:1
position: 491704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:497113-497213:1:exon

position:497113:1
position: 497113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497213:1
position: 497213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:498171-498512:1:exon

position:498171:1
position: 498171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498512:1
position: 498512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:500705-500971:1:exon

position:500705:1
position: 500705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500971:1
position: 500971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:502273-502308:1:exon

position:502273:1
position: 502273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502308:1
position: 502308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:502808-503683:1:exon

position:502808:1
position: 502808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503683:1
position: 503683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:505881-505981:1:exon

position:505881:1
position: 505881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505981:1
position: 505981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:508817-509035:1:exon

position:508817:1
position: 508817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509035:1
position: 509035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:513886-514055:1:exon

position:513886:1
position: 513886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514055:1
position: 514055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:517287-517740:1:exon

position:517287:1
position: 517287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517740:1
position: 517740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:530813-531027:1:exon

position:530813:1
position: 530813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531027:1
position: 531027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:537426-537509:1:exon

position:537426:1
position: 537426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537509:1
position: 537509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:539511-540627:1:exon

position:539511:1
position: 539511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119956823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956823
product: tight junction protein ZO-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038784276.1
SIO_010081: LOC119956823
subclass of: SO_0000673
so part of: LOC119956823
location: join(311933..312445,322919..323075,334607..334745,461168..461224,464935..465059,467089..467191,468827..469118,472112..472215,474446..474614,475022..475169,478533..478687,479589..479694,485973..486123,486552..486660,486942..487161,487556..487740,489574..489669,491318..491400,491494..491704,497113..497213,498171..498512,500705..500971,502273..502308,502808..503683,505881..505981,508817..509035,513886..514055,517287..517740,530813..531027,537426..537569,539511..540627)
location: region:311933-540627:1
so has part: feature:311933-312445:1:exon
so has part: feature:322919-323075:1:exon
so has part: feature:334607-334745:1:exon
so has part: feature:461168-461224:1:exon
so has part: feature:464935-465059:1:exon
so has part: feature:467089-467191:1:exon
so has part: feature:468827-469118:1:exon
so has part: feature:472112-472215:1:exon
so has part: feature:474446-474614:1:exon
so has part: feature:475022-475169:1:exon
so has part: feature:478533-478687:1:exon
so has part: feature:479589-479694:1:exon
so has part: feature:485973-486123:1:exon
so has part: feature:486552-486660:1:exon
so has part: feature:486942-487161:1:exon
so has part: feature:487556-487740:1:exon
so has part: feature:489574-489669:1:exon
so has part: feature:491318-491400:1:exon
so has part: feature:491494-491704:1:exon
so has part: feature:497113-497213:1:exon
so has part: feature:498171-498512:1:exon
so has part: feature:500705-500971:1:exon
so has part: feature:502273-502308:1:exon
so has part: feature:502808-503683:1:exon
so has part: feature:505881-505981:1:exon
so has part: feature:508817-509035:1:exon
so has part: feature:513886-514055:1:exon
so has part: feature:517287-517740:1:exon
so has part: feature:530813-531027:1:exon
so has part: feature:537426-537569:1:exon
so has part: feature:539511-540627:1:exon

position:311933:1
position: 311933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311933-312445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322919-323075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334607-334745:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:461168-461224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464935-465059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:467089-467191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:468827-469118:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:472112-472215:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:474446-474614:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:475022-475169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:478533-478687:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479589-479694:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:485973-486123:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486552-486660:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486942-487161:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:487556-487740:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:489574-489669:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:491318-491400:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:491494-491704:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:497113-497213:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:498171-498512:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:500705-500971:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:502273-502308:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:502808-503683:1:exon

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position:537569:1
position: 537569
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type: ForwardStrandPosition
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urn:…
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LOC119956823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956823
product: tight junction protein ZO-1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038784279.1
SIO_010081: LOC119956823
subclass of: SO_0000673
so part of: LOC119956823
location: join(311933..312445,322919..323075,334607..334745,461168..461224,464935..465059,467089..467191,468827..469118,472112..472215,474446..474614,475022..475169,478533..478687,479589..479694,485973..486123,486552..486660,486942..487161,487556..487740,489574..489669,491318..491400,491494..491704,497113..497213,498171..498512,500705..500971,502273..502308,502808..503683,505881..505981,508817..509035,513886..514055,517287..517740,530813..531027,537426..537530,539511..540627)
location: region:311933-540627:1
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position:537530:1
position: 537530
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 31
SIO_000628: feature:539511-540627:1:exon

LOC119956823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956823
product: tight junction protein ZO-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038784277.1
SIO_010081: LOC119956823
subclass of: SO_0000673
so part of: LOC119956823
location: join(311933..312445,322919..323075,334607..334745,461168..461224,464935..465059,467089..467191,468827..469118,472112..472215,474446..474614,475022..475169,478533..478687,479589..479694,485973..486123,486552..486660,486942..487161,487556..487740,489574..489669,491318..491400,491494..491704,497113..497213,498171..498512,500705..500971,502273..502308,502808..503668,505881..505981,508817..509035,513886..514055,517287..517740,530813..531027,537426..537569,539511..540627)
location: region:311933-540627:1
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:539511-540627:1:exon

LOC119956823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956823
product: tight junction protein ZO-1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_038784278.1
SIO_010081: LOC119956823
subclass of: SO_0000673
so part of: LOC119956823
location: join(311934..312445,322919..323075,334607..334745,461168..461224,464935..465059,467089..467191,468827..469118,472112..472215,474446..474614,475022..475169,478533..478687,479589..479694,485973..486123,486552..486660,486942..487161,487556..487740,489574..489669,491318..491400,491494..491704,497113..497213,498171..498512,500705..500971,502808..503683,505881..505981,508817..509035,513886..514055,517287..517740,530813..531027,537426..537569,539511..540627)
location: region:311934-540627:1
so has part: feature:311934-312445:1:exon
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position:311934:1
position: 311934
reference: sequence
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urn:…
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LOC119956823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956823
product: tight junction protein ZO-1-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_038784281.1
SIO_010081: LOC119956823
subclass of: SO_0000673
so part of: LOC119956823
location: join(311935..312445,322919..323075,334607..334745,461168..461224,464935..465059,467089..467191,468827..469118,472112..472215,474446..474614,475022..475169,478533..478687,479589..479694,485973..486123,486552..486660,486942..487161,487556..487740,489574..489669,491318..491400,491494..491704,497113..497213,498171..498512,502808..503683,505881..505981,508817..509035,513886..514055,517287..517740,530813..531027,537426..537569,539511..540627)
location: region:311935-540627:1
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position:311935:1
position: 311935
reference: sequence
type: ForwardStrandPosition
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urn:…
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SIO_000300: 14
SIO_000628: feature:486552-486660:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486942-487161:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:487556-487740:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:489574-489669:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:491318-491400:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:491494-491704:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:497113-497213:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:498171-498512:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:502808-503683:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:505881-505981:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:508817-509035:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:513886-514055:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:517287-517740:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:530813-531027:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:537426-537569:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:539511-540627:1:exon

LOC119956823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tight junction protein ZO-1-like isoform X1
translation: MSRDTTLRLLSKPERRIKQSPWVQQRNIRLLRNHHERIRRELDISKILQRLVNCKVFSLAEYQEIVSQQCRGQQAETFVDKLCLKGPHAFSSFCSALEDVCPSLLPCFTMDCEAAHFGQSKESLSSEKIIREEQECKLSRMKVRAEPGMQWHSPGDKISIYFSKQRVVPNSTTSPGATETANQGKLKPSLRLIKARGQCYKNHACRSSLEFRNTIMEETVIWEQQTVPLHRAPGFGFGIAISGGKDNPHFQSGETSIVISDVLKGGPAEGLLHENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKRKIQMPVSRPEPDRQPISEPEDDSYEEEEVYDRKSGRSGPSPYSGRRSERSIGRREDSRERSLSPRSERRSVSSNLPPKPIKVTLVKSRKSEEYGLRLASHIFVKEISSEGLAAKDGNIHEGDVVLKINGTVTENMSLGDAKKLIERSKGKLKMVVQRDERATLLNVPDLDDSIPSANASERDDISEIHSLVSDHSNHSNERPRLRSRSRSPDKRSDWSDHSRHSPQPISNGRSREDDVIRGPKAGAVSTPVKNTEEMFVIKAVEEPVAAVVDERTEKQAPPLPEPKPVYAQPGQPDVDLPVSPADAPIPNSSHDDGMLRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILQVNNVDFANIIREEAVLFLLDLPKGDEVTILAQQKKDVYRRIVESDVGDSFYIRTHFDYDKESPYGLSFNRGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNRNRAEQLSSVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSRDDLSAQPVHTKFPAYERVVLREAGFLRPVVIFGPLADIAREKLAREETDLYEIARSEPRDAGTDQRSSGIIRLHTIKQVIDRDKHAVLDITPNAVDRLNYAQWYPIVIFLNPDSKQGVKTMRQRLSPESRKSARKLFERALKLRKNNHHLFTSNINLNSMNEGWYGALKESVQQQQSQLVWVSEGKADGAAEDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYDDTDTEGGAYTDQELDETLNDDIGPPESAITRSSEPVREDSSMMHPESMAQAFPSYSVQMQRVDSPVYKPSTNQPKADIPPAIPNSSQHLETISVVTVPSTVNTTVDHSVILEEIAPPPHCNPEPQIDPYSKPSPEPPRVIHSVSPERLRDPEPTATRTAEPTKHEYDGLNKITLKMSKKDSYNNELPRQNYDIKQPVGNQPVLRADKERQMYEPQQQHFEEQAPYRHESQAKYEQQLSPGYGPISHYYENPPEYSDMWLHYNEKSTQQYQSPPYFEDQHPQDFDPKHIEHYPDHDYQSVHEEPPPANYENRLPRYDKPLKSYKPQQPQYSDQPLHGYDPHPRYEQNPPAIHPPTARSPEPHQQYFDSQVRTYDHGQSQGYNSLPRQFEPIHHTDASFPPPPPHHSKTADSLHSTIKPLPPLPGKPNVEEDVDPAMKPQSVLTRVKLFESKKSTSSKMKDPTEVTPVRPPEVAPKPVLIPVTVSKPVFQPTPEPEKPSYLYRGPEPQVKLAEEPPRINHYSADEDEEDYRKQLSYFGRRTLEQKPVPQLPAISFPESAKSSEPGLQSNYTGYLPRGTSTNFDHVVKPSIMEKKYEPAPQQPSLQSRYGPTPQSSFNSSVSLPVQPKLSPTEVSSVPRDLSMLQSKPEHPQSKPQTFRPSARDETVHSNFYPQKSFPVSERAPVNGMELPQKQAATAYTRFTPKPYTSAARPFERKFESPKFDHNLLPSEPQIQPKPEPLPKAHSSPQPPDFDSGTDTFPKPSDHRPKYQANNIHAIPKAIPVSPSALEDDDDDSHTVVATARGIFDSNGGVLSSVETGVSIIIPKGAIPEGVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSSSGDPKSWQNKSLPGDPNYHVGTNCVSVLIDHF
SIO_010081: LOC119956823
subclass of: SO_0000673
so part of: LOC119956823
location: join(312106..312445,322919..323075,334607..334745,461168..461224,464935..465059,467089..467191,468827..469118,472112..472215,474446..474614,475022..475169,478533..478687,479589..479694,485973..486123,486552..486660,486942..487161,487556..487740,489574..489669,491318..491400,491494..491704,497113..497213,498171..498512,500705..500971,502273..502308,502808..503683,505881..505981,508817..509035,513886..514055,517287..517740,530813..531027,537426..537569,539511..539605)
location: region:312106-539605:1
so has part: feature:312106-312445:1:exon
so has part: feature:322919-323075:1:exon
so has part: feature:334607-334745:1:exon
so has part: feature:461168-461224:1:exon
so has part: feature:464935-465059:1:exon
so has part: feature:467089-467191:1:exon
so has part: feature:468827-469118:1:exon
so has part: feature:472112-472215:1:exon
so has part: feature:474446-474614:1:exon
so has part: feature:475022-475169:1:exon
so has part: feature:478533-478687:1:exon
so has part: feature:479589-479694:1:exon
so has part: feature:485973-486123:1:exon
so has part: feature:486552-486660:1:exon
so has part: feature:486942-487161:1:exon
so has part: feature:487556-487740:1:exon
so has part: feature:489574-489669:1:exon
so has part: feature:491318-491400:1:exon
so has part: feature:491494-491704:1:exon
so has part: feature:497113-497213:1:exon
so has part: feature:498171-498512:1:exon
so has part: feature:500705-500971:1:exon
so has part: feature:502273-502308:1:exon
so has part: feature:502808-503683:1:exon
so has part: feature:505881-505981:1:exon
so has part: feature:508817-509035:1:exon
so has part: feature:513886-514055:1:exon
so has part: feature:517287-517740:1:exon
so has part: feature:530813-531027:1:exon
so has part: feature:537426-537569:1:exon
so has part: feature:539511-539605:1:exon

XP_038640204.1
type: Protein
SIO_000068: ncbiprotein

position:312106:1
position: 312106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539605:1
position: 539605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312106-312445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322919-323075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334607-334745:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:461168-461224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464935-465059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:467089-467191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:468827-469118:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:472112-472215:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:474446-474614:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:475022-475169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:478533-478687:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479589-479694:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:485973-486123:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486552-486660:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486942-487161:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:487556-487740:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:489574-489669:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:491318-491400:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:491494-491704:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:497113-497213:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:498171-498512:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:500705-500971:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:502273-502308:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:502808-503683:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:505881-505981:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:508817-509035:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:513886-514055:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:517287-517740:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:530813-531027:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:537426-537569:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:539511-539605:1:exon

LOC119956823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tight junction protein ZO-1-like isoform X4
translation: MSRDTTLRLLSKPERRIKQSPWVQQRNIRLLRNHHERIRRELDISKILQRLVNCKVFSLAEYQEIVSQQCRGQQAETFVDKLCLKGPHAFSSFCSALEDVCPSLLPCFTMDCEAAHFGQSKESLSSEKIIREEQECKLSRMKVRAEPGMQWHSPGDKISIYFSKQRVVPNSTTSPGATETANQGKLKPSLRLIKARGQCYKNHACRSSLEFRNTIMEETVIWEQQTVPLHRAPGFGFGIAISGGKDNPHFQSGETSIVISDVLKGGPAEGLLHENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKRKIQMPVSRPEPDRQPISEPEDDSYEEEEVYDRKSGRSGPSPYSGRRSERSIGRREDSRERSLSPRSERRSVSSNLPPKPIKVTLVKSRKSEEYGLRLASHIFVKEISSEGLAAKDGNIHEGDVVLKINGTVTENMSLGDAKKLIERSKGKLKMVVQRDERATLLNVPDLDDSIPSANASERDDISEIHSLVSDHSNHSNERPRLRSRSRSPDKRSDWSDHSRHSPQPISNGRSREDDVIRGPKAGAVSTPVKNTEEMFVIKAVEEPVAAVVDERTEKQAPPLPEPKPVYAQPGQPDVDLPVSPADAPIPNSSHDDGMLRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILQVNNVDFANIIREEAVLFLLDLPKGDEVTILAQQKKDVYRRIVESDVGDSFYIRTHFDYDKESPYGLSFNRGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNRNRAEQLSSVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSRDDLSAQPVHTKFPAYERVVLREAGFLRPVVIFGPLADIAREKLAREETDLYEIARSEPRDAGTDQRSSGIIRLHTIKQVIDRDKHAVLDITPNAVDRLNYAQWYPIVIFLNPDSKQGVKTMRQRLSPESRKSARKLFERALKLRKNNHHLFTSNINLNSMNEGWYGALKESVQQQQSQLVWVSEGKADGAAEDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYDDTDTEGGAYTDQELDETLNDDIGPPESAITRSSEPVREDSSMMHPESMAQAFPSYSVQMQRVDSPVYKPSTNQPKADIPPAIPNSSQHLETISVVTVPSTVNTTVDHSVILEEIAPPPHCNPEPQIDPYSKPSPEPPRVIHSVSPERLRDPEPTATRTAEPTKHEYDGLNKITLKMSKKDSYNNELPRQNYDIKQPVGNQPVLRADKERQMYEPQQQHFEEQAPYRHESQAKYEQQLSPGYGPISHYYENPPEYSDMWLHYNEKSTQQYQSPPYFEDQHPQDFDPKHIEHYPDHDYQSVHEEPPPANYENRLPRYDKPLKSYKPQQPQYSDQPLHGYDPHPRYEQNPPAIHPPTARSPEPHQQYFDSQVRTYDHGQSQGYNSLPRQFEPIHHTDASFPPPPPHHSKTADSLHSTIKPLPPLPGKPNVEEDVDPAMKPQSVLTRVKLFESKKSTSSKMKDPTEVTPVRPPEVAPKPVLIPVTVSKPVFQPTPEPEKPSYLYRGPEPQVKLAEEPPRINHYSADEDEEDYRKQLSYFGRRTLEQKPVPQLPAISFPESAKSSEPGLQSNYTGYLPRGTSTNFDHVVKPSIMEKKYEPAPQQPSLQSRYGPTPQSSFNSSVSLPVQPKLSPTEVSSVPRDLSMLQSKPEHPQSKPQTFRPSARDETVHSNFYPQKSFPVSERAPVNGMELPQKQAATAYTRFTPKPYTSAARPFERKFESPKFDHNLLPSEPQIQPKPEPLPKAHSSPQPPDFDSGTDTFPKPSDHRPKYQANNIHAIPKAIPVSPSALEDDDDDSHTVVATARGIFDSNGGVLSSVETGVSIIIPKGAIPEGVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGDPKSWQNKSLPGDPNYHVGTNCVSVLIDHF
SIO_010081: LOC119956823
subclass of: SO_0000673
so part of: LOC119956823
location: join(312106..312445,322919..323075,334607..334745,461168..461224,464935..465059,467089..467191,468827..469118,472112..472215,474446..474614,475022..475169,478533..478687,479589..479694,485973..486123,486552..486660,486942..487161,487556..487740,489574..489669,491318..491400,491494..491704,497113..497213,498171..498512,500705..500971,502273..502308,502808..503683,505881..505981,508817..509035,513886..514055,517287..517740,530813..531027,537426..537530,539511..539605)
location: region:312106-539605:1
so has part: feature:312106-312445:1:exon
so has part: feature:322919-323075:1:exon
so has part: feature:334607-334745:1:exon
so has part: feature:461168-461224:1:exon
so has part: feature:464935-465059:1:exon
so has part: feature:467089-467191:1:exon
so has part: feature:468827-469118:1:exon
so has part: feature:472112-472215:1:exon
so has part: feature:474446-474614:1:exon
so has part: feature:475022-475169:1:exon
so has part: feature:478533-478687:1:exon
so has part: feature:479589-479694:1:exon
so has part: feature:485973-486123:1:exon
so has part: feature:486552-486660:1:exon
so has part: feature:486942-487161:1:exon
so has part: feature:487556-487740:1:exon
so has part: feature:489574-489669:1:exon
so has part: feature:491318-491400:1:exon
so has part: feature:491494-491704:1:exon
so has part: feature:497113-497213:1:exon
so has part: feature:498171-498512:1:exon
so has part: feature:500705-500971:1:exon
so has part: feature:502273-502308:1:exon
so has part: feature:502808-503683:1:exon
so has part: feature:505881-505981:1:exon
so has part: feature:508817-509035:1:exon
so has part: feature:513886-514055:1:exon
so has part: feature:517287-517740:1:exon
so has part: feature:530813-531027:1:exon
so has part: feature:537426-537530:1:exon
so has part: feature:539511-539605:1:exon

XP_038640207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312106-312445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322919-323075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334607-334745:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:461168-461224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464935-465059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:467089-467191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:468827-469118:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:472112-472215:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:474446-474614:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:475022-475169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:478533-478687:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479589-479694:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:485973-486123:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486552-486660:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486942-487161:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:487556-487740:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:489574-489669:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:491318-491400:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:491494-491704:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:497113-497213:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:498171-498512:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:500705-500971:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:502273-502308:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:502808-503683:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:505881-505981:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:508817-509035:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:513886-514055:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:517287-517740:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:530813-531027:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:537426-537530:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:539511-539605:1:exon

LOC119956823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tight junction protein ZO-1-like isoform X5
translation: MSRDTTLRLLSKPERRIKQSPWVQQRNIRLLRNHHERIRRELDISKILQRLVNCKVFSLAEYQEIVSQQCRGQQAETFVDKLCLKGPHAFSSFCSALEDVCPSLLPCFTMDCEAAHFGQSKESLSSEKIIREEQECKLSRMKVRAEPGMQWHSPGDKISIYFSKQRVVPNSTTSPGATETANQGKLKPSLRLIKARGQCYKNHACRSSLEFRNTIMEETVIWEQQTVPLHRAPGFGFGIAISGGKDNPHFQSGETSIVISDVLKGGPAEGLLHENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKRKIQMPVSRPEPDRQPISEPEDDSYEEEEVYDRKSGRSGPSPYSGRRSERSIGRREDSRERSLSPRSERRSVSSNLPPKPIKVTLVKSRKSEEYGLRLASHIFVKEISSEGLAAKDGNIHEGDVVLKINGTVTENMSLGDAKKLIERSKGKLKMVVQRDERATLLNVPDLDDSIPSANASERDDISEIHSLVSDHSNHSNERPRLRSRSRSPDKRSDWSDHSRHSPQPISNGRSREDDVIRGPKAGAVSTPVKNTEEMFVIKAVEEPVAAVVDERTEKQAPPLPEPKPVYAQPGQPDVDLPVSPADAPIPNSSHDDGMLRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILQVNNVDFANIIREEAVLFLLDLPKGDEVTILAQQKKDVYRRIVESDVGDSFYIRTHFDYDKESPYGLSFNRGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNRNRAEQLSSVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSRDDLSAQPVHTKFPAYERVVLREAGFLRPVVIFGPLADIAREKLAREETDLYEIARSEPRDAGTDQRSSGIIRLHTIKQVIDRDKHAVLDITPNAVDRLNYAQWYPIVIFLNPDSKQGVKTMRQRLSPESRKSARKLFERALKLRKNNHHLFTSNINLNSMNEGWYGALKESVQQQQSQLVWVSEGKADGAAEDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYDDTDTEGGAYTDQELDETLNDDIGPPESAITRSSEPVREDSSMMHPESMAQAFPSYSVQMQRVDSPVYKPSTNQPKADIPPAIPNSSQHLETISVVTVPSTVNTTVDHSVILEEIAPPPHCNPEPQIDPYSKPSPEPPRVIHSVSPERLRDPEPTATRTAEPTKHEYDGLNKITLKMSKKDSYNNELPRQNYDIKQPVGNQPVLRADKERQMYEPQQQHFEEQAPYRHESQAKYEQQLSPGYGPISHYYENPPEYSDMWLHYNEKSTQQYQSPPYFEDQHPQDFDPKHIEHYPDHDYQSVHEEPPPANYENRLPRYDKPLKSYKPQQPQYSDQPLHGYDPHPRYEQNPPAIHPPTARSPEPHQQYFDSQVRTYDHGQSQGYNSLPRQFEPIHHTDASFPPPPPHHSKTADSLHSTIKPLPPLPGKPNVEEDVDPAMKPQSVLTRVKLFESKKSTSSKMKDPTEVTPVRPPEVAPKPVLIPVTVSKPVFQPTPEPEKPSYLYRGPEPQVKLAEEPPRINHYSADEDEEDYRKQLSYFGRRTLEQKPVPQLPAISFPESAKSSEPGLQSNYTGYLPRGTSTNFDHVVKPSIMEKKYEPAPQQPSLQSRYGPTPQSSFNSSVSLPVQPKLSPTEVSSVPRDLSMLQSKPEHPQSKPQTFRPSARDETVHSNFYPQKSFPVSERAPVNGMELPQKQAATAYTRFTPKPYTSAARPFERKFESPKFDHNLLPSEPQIQPKPEPLPKAHSSPQPPDFDSGTDTFPKPSDHRPKYQANNIHAIPKAIPVSPSALEDDDDDSHTVVATARGIFDSNGGVLSSVETGVSIIIPKGAIPEGVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCDPKSWQNKSLPGDPNYHVGTNCVSVLIDHF
SIO_010081: LOC119956823
subclass of: SO_0000673
so part of: LOC119956823
location: join(312106..312445,322919..323075,334607..334745,461168..461224,464935..465059,467089..467191,468827..469118,472112..472215,474446..474614,475022..475169,478533..478687,479589..479694,485973..486123,486552..486660,486942..487161,487556..487740,489574..489669,491318..491400,491494..491704,497113..497213,498171..498512,500705..500971,502273..502308,502808..503683,505881..505981,508817..509035,513886..514055,517287..517740,530813..531027,537426..537509,539511..539605)
location: region:312106-539605:1
so has part: feature:312106-312445:1:exon
so has part: feature:322919-323075:1:exon
so has part: feature:334607-334745:1:exon
so has part: feature:461168-461224:1:exon
so has part: feature:464935-465059:1:exon
so has part: feature:467089-467191:1:exon
so has part: feature:468827-469118:1:exon
so has part: feature:472112-472215:1:exon
so has part: feature:474446-474614:1:exon
so has part: feature:475022-475169:1:exon
so has part: feature:478533-478687:1:exon
so has part: feature:479589-479694:1:exon
so has part: feature:485973-486123:1:exon
so has part: feature:486552-486660:1:exon
so has part: feature:486942-487161:1:exon
so has part: feature:487556-487740:1:exon
so has part: feature:489574-489669:1:exon
so has part: feature:491318-491400:1:exon
so has part: feature:491494-491704:1:exon
so has part: feature:497113-497213:1:exon
so has part: feature:498171-498512:1:exon
so has part: feature:500705-500971:1:exon
so has part: feature:502273-502308:1:exon
so has part: feature:502808-503683:1:exon
so has part: feature:505881-505981:1:exon
so has part: feature:508817-509035:1:exon
so has part: feature:513886-514055:1:exon
so has part: feature:517287-517740:1:exon
so has part: feature:530813-531027:1:exon
so has part: feature:537426-537509:1:exon
so has part: feature:539511-539605:1:exon

XP_038640208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312106-312445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322919-323075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334607-334745:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:461168-461224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464935-465059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:467089-467191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:468827-469118:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:472112-472215:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:474446-474614:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:475022-475169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:478533-478687:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479589-479694:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:485973-486123:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486552-486660:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486942-487161:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:487556-487740:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:489574-489669:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:491318-491400:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:491494-491704:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:497113-497213:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:498171-498512:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:500705-500971:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:502273-502308:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:502808-503683:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:505881-505981:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:508817-509035:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:513886-514055:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:517287-517740:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:530813-531027:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:537426-537509:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:539511-539605:1:exon

LOC119956823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tight junction protein ZO-1-like isoform X2
translation: MSRDTTLRLLSKPERRIKQSPWVQQRNIRLLRNHHERIRRELDISKILQRLVNCKVFSLAEYQEIVSQQCRGQQAETFVDKLCLKGPHAFSSFCSALEDVCPSLLPCFTMDCEAAHFGQSKESLSSEKIIREEQECKLSRMKVRAEPGMQWHSPGDKISIYFSKQRVVPNSTTSPGATETANQGKLKPSLRLIKARGQCYKNHACRSSLEFRNTIMEETVIWEQQTVPLHRAPGFGFGIAISGGKDNPHFQSGETSIVISDVLKGGPAEGLLHENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKRKIQMPVSRPEPDRQPISEPEDDSYEEEEVYDRKSGRSGPSPYSGRRSERSIGRREDSRERSLSPRSERRSVSSNLPPKPIKVTLVKSRKSEEYGLRLASHIFVKEISSEGLAAKDGNIHEGDVVLKINGTVTENMSLGDAKKLIERSKGKLKMVVQRDERATLLNVPDLDDSIPSANASERDDISEIHSLVSDHSNHSNERPRLRSRSRSPDKRSDWSDHSRHSPQPISNGRSREDDVIRGPKAGAVSTPVKNTEEMFVIKAVEEPVAAVVDERTEKQAPPLPEPKPVYAQPGQPDVDLPVSPADAPIPNSSHDDGMLRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILQVNNVDFANIIREEAVLFLLDLPKGDEVTILAQQKKDVYRRIVESDVGDSFYIRTHFDYDKESPYGLSFNRGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNRNRAEQLSSVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSRDDLSAQPVHTKFPAYERVVLREAGFLRPVVIFGPLADIAREKLAREETDLYEIARSEPRDAGTDQRSSGIIRLHTIKQVIDRDKHAVLDITPNAVDRLNYAQWYPIVIFLNPDSKQGVKTMRQRLSPESRKSARKLFERALKLRKNNHHLFTSNINLNSMNEGWYGALKESVQQQQSQLVWVSEGKADGAAEDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYDDTDTEGGAYTDQELDETLNDDIGPPESAITRSSEPVREDSSMMHPESMAQAFPSYSVQMQRVDSPVYKPSTNQPKADIPPAIPNSSQHLETISVVTVPSTVNTTVDHSVILEEIAPPPHCNPEPQIDPYSKPSPEPPRVIHSVSPERLRDPEPTATRTAEPTKHEYDGLNKITLKMSKKDSYNNELPRQNYDIKQPVGNQPVLRADKERQMYEPQQQHFEEQAPYRHESQAKYEQQLSPGYGPISHYYENPPEYSDMWLHYNEKSTQQYQSPPYFEDQHPQDFDPKHIEHYPDHDYQSVHEEPPPANYENRLPRYDKPLKSYKPQQPQYSDQPLHGYDPHPRYEQNPPAIHPPTARSPEPHQQYFDSQVRTYDHGQSQGYNSLPRQFEPIHHTDASFPPPPPHHSKTADSLHSTIKPLPPLPGKPNVEEDVDPAMKPQSVLTRVKLFESKKSTSSKMKDPTEPPEVAPKPVLIPVTVSKPVFQPTPEPEKPSYLYRGPEPQVKLAEEPPRINHYSADEDEEDYRKQLSYFGRRTLEQKPVPQLPAISFPESAKSSEPGLQSNYTGYLPRGTSTNFDHVVKPSIMEKKYEPAPQQPSLQSRYGPTPQSSFNSSVSLPVQPKLSPTEVSSVPRDLSMLQSKPEHPQSKPQTFRPSARDETVHSNFYPQKSFPVSERAPVNGMELPQKQAATAYTRFTPKPYTSAARPFERKFESPKFDHNLLPSEPQIQPKPEPLPKAHSSPQPPDFDSGTDTFPKPSDHRPKYQANNIHAIPKAIPVSPSALEDDDDDSHTVVATARGIFDSNGGVLSSVETGVSIIIPKGAIPEGVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSSSGDPKSWQNKSLPGDPNYHVGTNCVSVLIDHF
SIO_010081: LOC119956823
subclass of: SO_0000673
so part of: LOC119956823
location: join(312106..312445,322919..323075,334607..334745,461168..461224,464935..465059,467089..467191,468827..469118,472112..472215,474446..474614,475022..475169,478533..478687,479589..479694,485973..486123,486552..486660,486942..487161,487556..487740,489574..489669,491318..491400,491494..491704,497113..497213,498171..498512,500705..500971,502273..502308,502808..503668,505881..505981,508817..509035,513886..514055,517287..517740,530813..531027,537426..537569,539511..539605)
location: region:312106-539605:1
so has part: feature:312106-312445:1:exon
so has part: feature:322919-323075:1:exon
so has part: feature:334607-334745:1:exon
so has part: feature:461168-461224:1:exon
so has part: feature:464935-465059:1:exon
so has part: feature:467089-467191:1:exon
so has part: feature:468827-469118:1:exon
so has part: feature:472112-472215:1:exon
so has part: feature:474446-474614:1:exon
so has part: feature:475022-475169:1:exon
so has part: feature:478533-478687:1:exon
so has part: feature:479589-479694:1:exon
so has part: feature:485973-486123:1:exon
so has part: feature:486552-486660:1:exon
so has part: feature:486942-487161:1:exon
so has part: feature:487556-487740:1:exon
so has part: feature:489574-489669:1:exon
so has part: feature:491318-491400:1:exon
so has part: feature:491494-491704:1:exon
so has part: feature:497113-497213:1:exon
so has part: feature:498171-498512:1:exon
so has part: feature:500705-500971:1:exon
so has part: feature:502273-502308:1:exon
so has part: feature:502808-503668:1:exon
so has part: feature:505881-505981:1:exon
so has part: feature:508817-509035:1:exon
so has part: feature:513886-514055:1:exon
so has part: feature:517287-517740:1:exon
so has part: feature:530813-531027:1:exon
so has part: feature:537426-537569:1:exon
so has part: feature:539511-539605:1:exon

XP_038640205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312106-312445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322919-323075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334607-334745:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:461168-461224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464935-465059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:467089-467191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:468827-469118:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:472112-472215:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:474446-474614:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:475022-475169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:478533-478687:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479589-479694:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:485973-486123:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486552-486660:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486942-487161:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:487556-487740:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:489574-489669:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:491318-491400:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:491494-491704:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:497113-497213:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:498171-498512:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:500705-500971:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:502273-502308:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:502808-503668:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:505881-505981:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:508817-509035:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:513886-514055:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:517287-517740:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:530813-531027:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:537426-537569:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:539511-539605:1:exon

LOC119956823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tight junction protein ZO-1-like isoform X3
translation: MSRDTTLRLLSKPERRIKQSPWVQQRNIRLLRNHHERIRRELDISKILQRLVNCKVFSLAEYQEIVSQQCRGQQAETFVDKLCLKGPHAFSSFCSALEDVCPSLLPCFTMDCEAAHFGQSKESLSSEKIIREEQECKLSRMKVRAEPGMQWHSPGDKISIYFSKQRVVPNSTTSPGATETANQGKLKPSLRLIKARGQCYKNHACRSSLEFRNTIMEETVIWEQQTVPLHRAPGFGFGIAISGGKDNPHFQSGETSIVISDVLKGGPAEGLLHENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKRKIQMPVSRPEPDRQPISEPEDDSYEEEEVYDRKSGRSGPSPYSGRRSERSIGRREDSRERSLSPRSERRSVSSNLPPKPIKVTLVKSRKSEEYGLRLASHIFVKEISSEGLAAKDGNIHEGDVVLKINGTVTENMSLGDAKKLIERSKGKLKMVVQRDERATLLNVPDLDDSIPSANASERDDISEIHSLVSDHSNHSNERPRLRSRSRSPDKRSDWSDHSRHSPQPISNGRSREDDVIRGPKAGAVSTPVKNTEEMFVIKAVEEPVAAVVDERTEKQAPPLPEPKPVYAQPGQPDVDLPVSPADAPIPNSSHDDGMLRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILQVNNVDFANIIREEAVLFLLDLPKGDEVTILAQQKKDVYRRIVESDVGDSFYIRTHFDYDKESPYGLSFNRGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNRNRAEQLSSVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSRDDLSAQPVHTKFPAYERVVLREAGFLRPVVIFGPLADIAREKLAREETDLYEIARSEPRDAGTDQRSSGIIRLHTIKQVIDRDKHAVLDITPNAVDRLNYAQWYPIVIFLNPDSKQGVKTMRQRLSPESRKSARKLFERALKLRKNNHHLFTSNINLNSMNEGWYGALKESVQQQQSQLVWVSEGKADGAAEDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYDDTDTEGGAYTDQELDETLNDDIGPPESAITRSSEPVREDSSMMHPESMAQAFPSYSVQMQRVDSPVYKPSTNQPKADIPPAIPNSSQHLETISVVTVPSTVNTTVDHSVILEEIAPPPHCNPEPQIDPYSKPSPEPPRVIHSVSPERLRDPEPTATRTAEPTKMSKKDSYNNELPRQNYDIKQPVGNQPVLRADKERQMYEPQQQHFEEQAPYRHESQAKYEQQLSPGYGPISHYYENPPEYSDMWLHYNEKSTQQYQSPPYFEDQHPQDFDPKHIEHYPDHDYQSVHEEPPPANYENRLPRYDKPLKSYKPQQPQYSDQPLHGYDPHPRYEQNPPAIHPPTARSPEPHQQYFDSQVRTYDHGQSQGYNSLPRQFEPIHHTDASFPPPPPHHSKTADSLHSTIKPLPPLPGKPNVEEDVDPAMKPQSVLTRVKLFESKKSTSSKMKDPTEVTPVRPPEVAPKPVLIPVTVSKPVFQPTPEPEKPSYLYRGPEPQVKLAEEPPRINHYSADEDEEDYRKQLSYFGRRTLEQKPVPQLPAISFPESAKSSEPGLQSNYTGYLPRGTSTNFDHVVKPSIMEKKYEPAPQQPSLQSRYGPTPQSSFNSSVSLPVQPKLSPTEVSSVPRDLSMLQSKPEHPQSKPQTFRPSARDETVHSNFYPQKSFPVSERAPVNGMELPQKQAATAYTRFTPKPYTSAARPFERKFESPKFDHNLLPSEPQIQPKPEPLPKAHSSPQPPDFDSGTDTFPKPSDHRPKYQANNIHAIPKAIPVSPSALEDDDDDSHTVVATARGIFDSNGGVLSSVETGVSIIIPKGAIPEGVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSSSGDPKSWQNKSLPGDPNYHVGTNCVSVLIDHF
SIO_010081: LOC119956823
subclass of: SO_0000673
so part of: LOC119956823
location: join(312106..312445,322919..323075,334607..334745,461168..461224,464935..465059,467089..467191,468827..469118,472112..472215,474446..474614,475022..475169,478533..478687,479589..479694,485973..486123,486552..486660,486942..487161,487556..487740,489574..489669,491318..491400,491494..491704,497113..497213,498171..498512,500705..500971,502808..503683,505881..505981,508817..509035,513886..514055,517287..517740,530813..531027,537426..537569,539511..539605)
location: region:312106-539605:1
so has part: feature:312106-312445:1:exon
so has part: feature:322919-323075:1:exon
so has part: feature:334607-334745:1:exon
so has part: feature:461168-461224:1:exon
so has part: feature:464935-465059:1:exon
so has part: feature:467089-467191:1:exon
so has part: feature:468827-469118:1:exon
so has part: feature:472112-472215:1:exon
so has part: feature:474446-474614:1:exon
so has part: feature:475022-475169:1:exon
so has part: feature:478533-478687:1:exon
so has part: feature:479589-479694:1:exon
so has part: feature:485973-486123:1:exon
so has part: feature:486552-486660:1:exon
so has part: feature:486942-487161:1:exon
so has part: feature:487556-487740:1:exon
so has part: feature:489574-489669:1:exon
so has part: feature:491318-491400:1:exon
so has part: feature:491494-491704:1:exon
so has part: feature:497113-497213:1:exon
so has part: feature:498171-498512:1:exon
so has part: feature:500705-500971:1:exon
so has part: feature:502808-503683:1:exon
so has part: feature:505881-505981:1:exon
so has part: feature:508817-509035:1:exon
so has part: feature:513886-514055:1:exon
so has part: feature:517287-517740:1:exon
so has part: feature:530813-531027:1:exon
so has part: feature:537426-537569:1:exon
so has part: feature:539511-539605:1:exon

XP_038640206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312106-312445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322919-323075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334607-334745:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:461168-461224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464935-465059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:467089-467191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:468827-469118:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:472112-472215:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:474446-474614:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:475022-475169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:478533-478687:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479589-479694:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:485973-486123:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486552-486660:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486942-487161:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:487556-487740:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:489574-489669:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:491318-491400:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:491494-491704:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:497113-497213:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:498171-498512:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:500705-500971:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:502808-503683:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:505881-505981:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:508817-509035:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:513886-514055:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:517287-517740:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:530813-531027:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:537426-537569:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:539511-539605:1:exon

LOC119956823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tight junction protein ZO-1-like isoform X6
translation: MSRDTTLRLLSKPERRIKQSPWVQQRNIRLLRNHHERIRRELDISKILQRLVNCKVFSLAEYQEIVSQQCRGQQAETFVDKLCLKGPHAFSSFCSALEDVCPSLLPCFTMDCEAAHFGQSKESLSSEKIIREEQECKLSRMKVRAEPGMQWHSPGDKISIYFSKQRVVPNSTTSPGATETANQGKLKPSLRLIKARGQCYKNHACRSSLEFRNTIMEETVIWEQQTVPLHRAPGFGFGIAISGGKDNPHFQSGETSIVISDVLKGGPAEGLLHENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKRKIQMPVSRPEPDRQPISEPEDDSYEEEEVYDRKSGRSGPSPYSGRRSERSIGRREDSRERSLSPRSERRSVSSNLPPKPIKVTLVKSRKSEEYGLRLASHIFVKEISSEGLAAKDGNIHEGDVVLKINGTVTENMSLGDAKKLIERSKGKLKMVVQRDERATLLNVPDLDDSIPSANASERDDISEIHSLVSDHSNHSNERPRLRSRSRSPDKRSDWSDHSRHSPQPISNGRSREDDVIRGPKAGAVSTPVKNTEEMFVIKAVEEPVAAVVDERTEKQAPPLPEPKPVYAQPGQPDVDLPVSPADAPIPNSSHDDGMLRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILQVNNVDFANIIREEAVLFLLDLPKGDEVTILAQQKKDVYRRIVESDVGDSFYIRTHFDYDKESPYGLSFNRGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNRNRAEQLSSVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSRDDLSAQPVHTKFPAYERVVLREAGFLRPVVIFGPLADIAREKLAREETDLYEIARSEPRDAGTDQRSSGIIRLHTIKQVIDRDKHAVLDITPNAVDRLNYAQWYPIVIFLNPDSKQGVKTMRQRLSPESRKSARKLFERALKLRKNNHHLFTSNINLNSMNEGWYGALKESVQQQQSQLVWVSEGKADGAAEDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYDDTDTEGGAYTDQELDETLNDDIGPPESAITRSSEPVREDSSMMHPESMAQAFPSYSVQMQRVDSPVYKPSTNQPMSKKDSYNNELPRQNYDIKQPVGNQPVLRADKERQMYEPQQQHFEEQAPYRHESQAKYEQQLSPGYGPISHYYENPPEYSDMWLHYNEKSTQQYQSPPYFEDQHPQDFDPKHIEHYPDHDYQSVHEEPPPANYENRLPRYDKPLKSYKPQQPQYSDQPLHGYDPHPRYEQNPPAIHPPTARSPEPHQQYFDSQVRTYDHGQSQGYNSLPRQFEPIHHTDASFPPPPPHHSKTADSLHSTIKPLPPLPGKPNVEEDVDPAMKPQSVLTRVKLFESKKSTSSKMKDPTEVTPVRPPEVAPKPVLIPVTVSKPVFQPTPEPEKPSYLYRGPEPQVKLAEEPPRINHYSADEDEEDYRKQLSYFGRRTLEQKPVPQLPAISFPESAKSSEPGLQSNYTGYLPRGTSTNFDHVVKPSIMEKKYEPAPQQPSLQSRYGPTPQSSFNSSVSLPVQPKLSPTEVSSVPRDLSMLQSKPEHPQSKPQTFRPSARDETVHSNFYPQKSFPVSERAPVNGMELPQKQAATAYTRFTPKPYTSAARPFERKFESPKFDHNLLPSEPQIQPKPEPLPKAHSSPQPPDFDSGTDTFPKPSDHRPKYQANNIHAIPKAIPVSPSALEDDDDDSHTVVATARGIFDSNGGVLSSVETGVSIIIPKGAIPEGVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSSSGDPKSWQNKSLPGDPNYHVGTNCVSVLIDHF
SIO_010081: LOC119956823
subclass of: SO_0000673
so part of: LOC119956823
location: join(312106..312445,322919..323075,334607..334745,461168..461224,464935..465059,467089..467191,468827..469118,472112..472215,474446..474614,475022..475169,478533..478687,479589..479694,485973..486123,486552..486660,486942..487161,487556..487740,489574..489669,491318..491400,491494..491704,497113..497213,498171..498512,502808..503683,505881..505981,508817..509035,513886..514055,517287..517740,530813..531027,537426..537569,539511..539605)
location: region:312106-539605:1
so has part: feature:312106-312445:1:exon
so has part: feature:322919-323075:1:exon
so has part: feature:334607-334745:1:exon
so has part: feature:461168-461224:1:exon
so has part: feature:464935-465059:1:exon
so has part: feature:467089-467191:1:exon
so has part: feature:468827-469118:1:exon
so has part: feature:472112-472215:1:exon
so has part: feature:474446-474614:1:exon
so has part: feature:475022-475169:1:exon
so has part: feature:478533-478687:1:exon
so has part: feature:479589-479694:1:exon
so has part: feature:485973-486123:1:exon
so has part: feature:486552-486660:1:exon
so has part: feature:486942-487161:1:exon
so has part: feature:487556-487740:1:exon
so has part: feature:489574-489669:1:exon
so has part: feature:491318-491400:1:exon
so has part: feature:491494-491704:1:exon
so has part: feature:497113-497213:1:exon
so has part: feature:498171-498512:1:exon
so has part: feature:502808-503683:1:exon
so has part: feature:505881-505981:1:exon
so has part: feature:508817-509035:1:exon
so has part: feature:513886-514055:1:exon
so has part: feature:517287-517740:1:exon
so has part: feature:530813-531027:1:exon
so has part: feature:537426-537569:1:exon
so has part: feature:539511-539605:1:exon

XP_038640209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312106-312445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322919-323075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334607-334745:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:461168-461224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464935-465059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:467089-467191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:468827-469118:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:472112-472215:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:474446-474614:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:475022-475169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:478533-478687:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479589-479694:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:485973-486123:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486552-486660:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486942-487161:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:487556-487740:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:489574-489669:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:491318-491400:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:491494-491704:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:497113-497213:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:498171-498512:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:502808-503683:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:505881-505981:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:508817-509035:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:513886-514055:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:517287-517740:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:530813-531027:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:537426-537569:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:539511-539605:1:exon

LOC119956823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956823
product: tight junction protein ZO-1-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038784282.1
SIO_010081: LOC119956823
subclass of: SO_0000673
so part of: LOC119956823
location: join(328322..328707,334607..334745,461168..461224,464935..465059,467089..467191,468827..469118,472112..472215,474446..474614,475022..475169,478533..478687,479589..479694,485973..486123,486552..486660,486942..487161,487556..487740,489574..489669,491318..491400,491494..491704,497113..497213,498171..498512,500705..500971,502273..502308,502808..503683,505881..505981,508817..509035,513886..514055,517287..517740,530813..531027,537426..537569,539511..540627)
location: region:328322-540627:1
so has part: feature:328322-328707:1:exon
so has part: feature:334607-334745:1:exon
so has part: feature:461168-461224:1:exon
so has part: feature:464935-465059:1:exon
so has part: feature:467089-467191:1:exon
so has part: feature:468827-469118:1:exon
so has part: feature:472112-472215:1:exon
so has part: feature:474446-474614:1:exon
so has part: feature:475022-475169:1:exon
so has part: feature:478533-478687:1:exon
so has part: feature:479589-479694:1:exon
so has part: feature:485973-486123:1:exon
so has part: feature:486552-486660:1:exon
so has part: feature:486942-487161:1:exon
so has part: feature:487556-487740:1:exon
so has part: feature:489574-489669:1:exon
so has part: feature:491318-491400:1:exon
so has part: feature:491494-491704:1:exon
so has part: feature:497113-497213:1:exon
so has part: feature:498171-498512:1:exon
so has part: feature:500705-500971:1:exon
so has part: feature:502273-502308:1:exon
so has part: feature:502808-503683:1:exon
so has part: feature:505881-505981:1:exon
so has part: feature:508817-509035:1:exon
so has part: feature:513886-514055:1:exon
so has part: feature:517287-517740:1:exon
so has part: feature:530813-531027:1:exon
so has part: feature:537426-537569:1:exon
so has part: feature:539511-540627:1:exon

position:328322:1
position: 328322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328322-328707:1:exon

position:328707:1
position: 328707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:334607-334745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:461168-461224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464935-465059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:467089-467191:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:468827-469118:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:472112-472215:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:474446-474614:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:475022-475169:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:478533-478687:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:479589-479694:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:485973-486123:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:486552-486660:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486942-487161:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:487556-487740:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:489574-489669:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:491318-491400:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:491494-491704:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:497113-497213:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:498171-498512:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:500705-500971:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:502273-502308:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:502808-503683:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:505881-505981:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:508817-509035:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:513886-514055:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:517287-517740:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:530813-531027:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:537426-537569:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:539511-540627:1:exon

LOC119956823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tight junction protein ZO-1-like isoform X7
translation: MKYQKYLSVLQISLGVTPSNRNSVLPHKRMLWVVPNSTTSPGATETANQGKLKPSLRLIKARGQCYKNHACRSSLEFRNTIMEETVIWEQQTVPLHRAPGFGFGIAISGGKDNPHFQSGETSIVISDVLKGGPAEGLLHENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKRKIQMPVSRPEPDRQPISEPEDDSYEEEEVYDRKSGRSGPSPYSGRRSERSIGRREDSRERSLSPRSERRSVSSNLPPKPIKVTLVKSRKSEEYGLRLASHIFVKEISSEGLAAKDGNIHEGDVVLKINGTVTENMSLGDAKKLIERSKGKLKMVVQRDERATLLNVPDLDDSIPSANASERDDISEIHSLVSDHSNHSNERPRLRSRSRSPDKRSDWSDHSRHSPQPISNGRSREDDVIRGPKAGAVSTPVKNTEEMFVIKAVEEPVAAVVDERTEKQAPPLPEPKPVYAQPGQPDVDLPVSPADAPIPNSSHDDGMLRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILQVNNVDFANIIREEAVLFLLDLPKGDEVTILAQQKKDVYRRIVESDVGDSFYIRTHFDYDKESPYGLSFNRGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNRNRAEQLSSVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSRDDLSAQPVHTKFPAYERVVLREAGFLRPVVIFGPLADIAREKLAREETDLYEIARSEPRDAGTDQRSSGIIRLHTIKQVIDRDKHAVLDITPNAVDRLNYAQWYPIVIFLNPDSKQGVKTMRQRLSPESRKSARKLFERALKLRKNNHHLFTSNINLNSMNEGWYGALKESVQQQQSQLVWVSEGKADGAAEDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYDDTDTEGGAYTDQELDETLNDDIGPPESAITRSSEPVREDSSMMHPESMAQAFPSYSVQMQRVDSPVYKPSTNQPKADIPPAIPNSSQHLETISVVTVPSTVNTTVDHSVILEEIAPPPHCNPEPQIDPYSKPSPEPPRVIHSVSPERLRDPEPTATRTAEPTKHEYDGLNKITLKMSKKDSYNNELPRQNYDIKQPVGNQPVLRADKERQMYEPQQQHFEEQAPYRHESQAKYEQQLSPGYGPISHYYENPPEYSDMWLHYNEKSTQQYQSPPYFEDQHPQDFDPKHIEHYPDHDYQSVHEEPPPANYENRLPRYDKPLKSYKPQQPQYSDQPLHGYDPHPRYEQNPPAIHPPTARSPEPHQQYFDSQVRTYDHGQSQGYNSLPRQFEPIHHTDASFPPPPPHHSKTADSLHSTIKPLPPLPGKPNVEEDVDPAMKPQSVLTRVKLFESKKSTSSKMKDPTEVTPVRPPEVAPKPVLIPVTVSKPVFQPTPEPEKPSYLYRGPEPQVKLAEEPPRINHYSADEDEEDYRKQLSYFGRRTLEQKPVPQLPAISFPESAKSSEPGLQSNYTGYLPRGTSTNFDHVVKPSIMEKKYEPAPQQPSLQSRYGPTPQSSFNSSVSLPVQPKLSPTEVSSVPRDLSMLQSKPEHPQSKPQTFRPSARDETVHSNFYPQKSFPVSERAPVNGMELPQKQAATAYTRFTPKPYTSAARPFERKFESPKFDHNLLPSEPQIQPKPEPLPKAHSSPQPPDFDSGTDTFPKPSDHRPKYQANNIHAIPKAIPVSPSALEDDDDDSHTVVATARGIFDSNGGVLSSVETGVSIIIPKGAIPEGVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSSSGDPKSWQNKSLPGDPNYHVGTNCVSVLIDHF
SIO_010081: LOC119956823
subclass of: SO_0000673
so part of: LOC119956823
location: join(328613..328707,334607..334745,461168..461224,464935..465059,467089..467191,468827..469118,472112..472215,474446..474614,475022..475169,478533..478687,479589..479694,485973..486123,486552..486660,486942..487161,487556..487740,489574..489669,491318..491400,491494..491704,497113..497213,498171..498512,500705..500971,502273..502308,502808..503683,505881..505981,508817..509035,513886..514055,517287..517740,530813..531027,537426..537569,539511..539605)
location: region:328613-539605:1
so has part: feature:328613-328707:1:exon
so has part: feature:334607-334745:1:exon
so has part: feature:461168-461224:1:exon
so has part: feature:464935-465059:1:exon
so has part: feature:467089-467191:1:exon
so has part: feature:468827-469118:1:exon
so has part: feature:472112-472215:1:exon
so has part: feature:474446-474614:1:exon
so has part: feature:475022-475169:1:exon
so has part: feature:478533-478687:1:exon
so has part: feature:479589-479694:1:exon
so has part: feature:485973-486123:1:exon
so has part: feature:486552-486660:1:exon
so has part: feature:486942-487161:1:exon
so has part: feature:487556-487740:1:exon
so has part: feature:489574-489669:1:exon
so has part: feature:491318-491400:1:exon
so has part: feature:491494-491704:1:exon
so has part: feature:497113-497213:1:exon
so has part: feature:498171-498512:1:exon
so has part: feature:500705-500971:1:exon
so has part: feature:502273-502308:1:exon
so has part: feature:502808-503683:1:exon
so has part: feature:505881-505981:1:exon
so has part: feature:508817-509035:1:exon
so has part: feature:513886-514055:1:exon
so has part: feature:517287-517740:1:exon
so has part: feature:530813-531027:1:exon
so has part: feature:537426-537569:1:exon
so has part: feature:539511-539605:1:exon

XP_038640210.1
type: Protein
SIO_000068: ncbiprotein

position:328613:1
position: 328613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328613-328707:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334607-334745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:461168-461224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464935-465059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:467089-467191:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:468827-469118:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:472112-472215:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:474446-474614:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:475022-475169:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:478533-478687:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:479589-479694:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:485973-486123:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:486552-486660:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486942-487161:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:487556-487740:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:489574-489669:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:491318-491400:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:491494-491704:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:497113-497213:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:498171-498512:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:500705-500971:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:502273-502308:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:502808-503683:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:505881-505981:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:508817-509035:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:513886-514055:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:517287-517740:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:530813-531027:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:537426-537569:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:539511-539605:1:exon

LOC119956823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956823
product: tight junction protein ZO-1-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038784284.1
SIO_010081: LOC119956823
subclass of: SO_0000673
so part of: LOC119956823
location: join(362489..362711,461168..461224,464935..465059,467089..467191,468827..469118,472112..472215,474446..474614,475022..475169,478533..478687,479589..479694,485973..486123,486552..486660,486942..487161,487556..487740,489574..489669,491318..491400,491494..491704,497113..497213,498171..498512,500705..500971,502273..502308,502808..503683,505881..505981,508817..509035,513886..514055,517287..517740,530813..531027,537426..537569,539511..540627)
location: region:362489-540627:1
so has part: feature:362489-362711:1:exon
so has part: feature:461168-461224:1:exon
so has part: feature:464935-465059:1:exon
so has part: feature:467089-467191:1:exon
so has part: feature:468827-469118:1:exon
so has part: feature:472112-472215:1:exon
so has part: feature:474446-474614:1:exon
so has part: feature:475022-475169:1:exon
so has part: feature:478533-478687:1:exon
so has part: feature:479589-479694:1:exon
so has part: feature:485973-486123:1:exon
so has part: feature:486552-486660:1:exon
so has part: feature:486942-487161:1:exon
so has part: feature:487556-487740:1:exon
so has part: feature:489574-489669:1:exon
so has part: feature:491318-491400:1:exon
so has part: feature:491494-491704:1:exon
so has part: feature:497113-497213:1:exon
so has part: feature:498171-498512:1:exon
so has part: feature:500705-500971:1:exon
so has part: feature:502273-502308:1:exon
so has part: feature:502808-503683:1:exon
so has part: feature:505881-505981:1:exon
so has part: feature:508817-509035:1:exon
so has part: feature:513886-514055:1:exon
so has part: feature:517287-517740:1:exon
so has part: feature:530813-531027:1:exon
so has part: feature:537426-537569:1:exon
so has part: feature:539511-540627:1:exon

position:362489:1
position: 362489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362489-362711:1:exon

position:362711:1
position: 362711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:461168-461224:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464935-465059:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467089-467191:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:468827-469118:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472112-472215:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474446-474614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:475022-475169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478533-478687:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:479589-479694:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:485973-486123:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:486552-486660:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:486942-487161:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:487556-487740:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:489574-489669:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:491318-491400:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:491494-491704:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:497113-497213:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:498171-498512:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:500705-500971:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:502273-502308:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:502808-503683:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:505881-505981:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:508817-509035:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:513886-514055:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:517287-517740:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:530813-531027:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:537426-537569:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:539511-540627:1:exon

LOC119956823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tight junction protein ZO-1-like isoform X8
translation: MSARAAGAPGKNTIMEETVIWEQQTVPLHRAPGFGFGIAISGGKDNPHFQSGETSIVISDVLKGGPAEGLLHENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKRKIQMPVSRPEPDRQPISEPEDDSYEEEEVYDRKSGRSGPSPYSGRRSERSIGRREDSRERSLSPRSERRSVSSNLPPKPIKVTLVKSRKSEEYGLRLASHIFVKEISSEGLAAKDGNIHEGDVVLKINGTVTENMSLGDAKKLIERSKGKLKMVVQRDERATLLNVPDLDDSIPSANASERDDISEIHSLVSDHSNHSNERPRLRSRSRSPDKRSDWSDHSRHSPQPISNGRSREDDVIRGPKAGAVSTPVKNTEEMFVIKAVEEPVAAVVDERTEKQAPPLPEPKPVYAQPGQPDVDLPVSPADAPIPNSSHDDGMLRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILQVNNVDFANIIREEAVLFLLDLPKGDEVTILAQQKKDVYRRIVESDVGDSFYIRTHFDYDKESPYGLSFNRGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNRNRAEQLSSVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSRDDLSAQPVHTKFPAYERVVLREAGFLRPVVIFGPLADIAREKLAREETDLYEIARSEPRDAGTDQRSSGIIRLHTIKQVIDRDKHAVLDITPNAVDRLNYAQWYPIVIFLNPDSKQGVKTMRQRLSPESRKSARKLFERALKLRKNNHHLFTSNINLNSMNEGWYGALKESVQQQQSQLVWVSEGKADGAAEDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYDDTDTEGGAYTDQELDETLNDDIGPPESAITRSSEPVREDSSMMHPESMAQAFPSYSVQMQRVDSPVYKPSTNQPKADIPPAIPNSSQHLETISVVTVPSTVNTTVDHSVILEEIAPPPHCNPEPQIDPYSKPSPEPPRVIHSVSPERLRDPEPTATRTAEPTKHEYDGLNKITLKMSKKDSYNNELPRQNYDIKQPVGNQPVLRADKERQMYEPQQQHFEEQAPYRHESQAKYEQQLSPGYGPISHYYENPPEYSDMWLHYNEKSTQQYQSPPYFEDQHPQDFDPKHIEHYPDHDYQSVHEEPPPANYENRLPRYDKPLKSYKPQQPQYSDQPLHGYDPHPRYEQNPPAIHPPTARSPEPHQQYFDSQVRTYDHGQSQGYNSLPRQFEPIHHTDASFPPPPPHHSKTADSLHSTIKPLPPLPGKPNVEEDVDPAMKPQSVLTRVKLFESKKSTSSKMKDPTEVTPVRPPEVAPKPVLIPVTVSKPVFQPTPEPEKPSYLYRGPEPQVKLAEEPPRINHYSADEDEEDYRKQLSYFGRRTLEQKPVPQLPAISFPESAKSSEPGLQSNYTGYLPRGTSTNFDHVVKPSIMEKKYEPAPQQPSLQSRYGPTPQSSFNSSVSLPVQPKLSPTEVSSVPRDLSMLQSKPEHPQSKPQTFRPSARDETVHSNFYPQKSFPVSERAPVNGMELPQKQAATAYTRFTPKPYTSAARPFERKFESPKFDHNLLPSEPQIQPKPEPLPKAHSSPQPPDFDSGTDTFPKPSDHRPKYQANNIHAIPKAIPVSPSALEDDDDDSHTVVATARGIFDSNGGVLSSVETGVSIIIPKGAIPEGVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSSSGDPKSWQNKSLPGDPNYHVGTNCVSVLIDHF
SIO_010081: LOC119956823
subclass of: SO_0000673
so part of: LOC119956823
location: join(362679..362711,461168..461224,464935..465059,467089..467191,468827..469118,472112..472215,474446..474614,475022..475169,478533..478687,479589..479694,485973..486123,486552..486660,486942..487161,487556..487740,489574..489669,491318..491400,491494..491704,497113..497213,498171..498512,500705..500971,502273..502308,502808..503683,505881..505981,508817..509035,513886..514055,517287..517740,530813..531027,537426..537569,539511..539605)
location: region:362679-539605:1
so has part: feature:362679-362711:1:exon
so has part: feature:461168-461224:1:exon
so has part: feature:464935-465059:1:exon
so has part: feature:467089-467191:1:exon
so has part: feature:468827-469118:1:exon
so has part: feature:472112-472215:1:exon
so has part: feature:474446-474614:1:exon
so has part: feature:475022-475169:1:exon
so has part: feature:478533-478687:1:exon
so has part: feature:479589-479694:1:exon
so has part: feature:485973-486123:1:exon
so has part: feature:486552-486660:1:exon
so has part: feature:486942-487161:1:exon
so has part: feature:487556-487740:1:exon
so has part: feature:489574-489669:1:exon
so has part: feature:491318-491400:1:exon
so has part: feature:491494-491704:1:exon
so has part: feature:497113-497213:1:exon
so has part: feature:498171-498512:1:exon
so has part: feature:500705-500971:1:exon
so has part: feature:502273-502308:1:exon
so has part: feature:502808-503683:1:exon
so has part: feature:505881-505981:1:exon
so has part: feature:508817-509035:1:exon
so has part: feature:513886-514055:1:exon
so has part: feature:517287-517740:1:exon
so has part: feature:530813-531027:1:exon
so has part: feature:537426-537569:1:exon
so has part: feature:539511-539605:1:exon

XP_038640212.1
type: Protein
SIO_000068: ncbiprotein

position:362679:1
position: 362679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362679-362711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:461168-461224:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464935-465059:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467089-467191:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:468827-469118:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472112-472215:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474446-474614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:475022-475169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478533-478687:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:479589-479694:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:485973-486123:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:486552-486660:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:486942-487161:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:487556-487740:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:489574-489669:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:491318-491400:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:491494-491704:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:497113-497213:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:498171-498512:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:500705-500971:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:502273-502308:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:502808-503683:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:505881-505981:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:508817-509035:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:513886-514055:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:517287-517740:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:530813-531027:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:537426-537569:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:539511-539605:1:exon

fam189a1
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: fam189a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 549354..616125
location: region:549354-616125:1
so has part: feature:549354-616125:1:exon
subclass of: SO_0000010

119956745
type: Gene
SIO_000068: ncbigene

position:549354:1
position: 549354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616125:1
position: 616125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549354-616125:1:exon

fam189a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: fam189a1
product: family with sequence similarity 189 member A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_038784094.1
SIO_010081: fam189a1
subclass of: SO_0000673
so part of: fam189a1
location: join(549354..549585,575969..576025,595950..596060,599231..599362,600177..600284,601236..601396,604006..604141,609753..609840,611240..611716,614285..614607,614827..616125)
location: region:549354-616125:1
so has part: feature:549354-549585:1:exon
so has part: feature:575969-576025:1:exon
so has part: feature:595950-596060:1:exon
so has part: feature:599231-599362:1:exon
so has part: feature:600177-600284:1:exon
so has part: feature:601236-601396:1:exon
so has part: feature:604006-604141:1:exon
so has part: feature:609753-609840:1:exon
so has part: feature:611240-611716:1:exon
so has part: feature:614285-614607:1:exon
so has part: feature:614827-616125:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:549354-549585:1:exon

position:549585:1
position: 549585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:575969-576025:1:exon

position:575969:1
position: 575969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576025:1
position: 576025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:595950-596060:1:exon

position:595950:1
position: 595950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596060:1
position: 596060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:599231-599362:1:exon

position:599231:1
position: 599231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599362:1
position: 599362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:600177-600284:1:exon

position:600177:1
position: 600177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600284:1
position: 600284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:601236-601396:1:exon

position:601236:1
position: 601236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601396:1
position: 601396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:604006-604141:1:exon

position:604006:1
position: 604006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604141:1
position: 604141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:609753-609840:1:exon

position:609753:1
position: 609753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609840:1
position: 609840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:611240-611716:1:exon

position:611240:1
position: 611240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611716:1
position: 611716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:614285-614607:1:exon

position:614285:1
position: 614285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614607:1
position: 614607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:614827-616125:1:exon

position:614827:1
position: 614827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fam189a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: fam189a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM189A1 isoform X1
translation: MPGGRRCGCEAAGGWRGSRSRGSRSRGLRSRGLLLTLGAAQLALGGLIVAVSFAALALTSSARVRHSCPFWAGFSVLLSGLIGIVSWKRPISLVITFFMLLSAVCVMLNLAGSILSCQNAQMVTSLGECQLYKFDGDGVCVCCEIQEQTKGCSTFSETLKLNPVRECSRVRLALKDLLFSICALNVISTIVCALATAMCCMQMVTADIMQILIPQRLRASNPDCVSAHGIDLQQPLDFDEFIPPIPPPPYYPPEYTCSSGVEAQRDLHLDFPHSPFDTMYSVAINSPRSLYPAELPPPYEVVVGETSTSQVNLLHHHSSEQNSSSTLCDGSTSAAFNTQVFVDNASLTLCEPTDAPVCNGLSGDCCSSEVQESVPAANSAIPAFAMDRGPTSLETDVRWRHRTYSESSHEEGSSSPALSQGCEHRLSECAGLSTVGKKTHAPAQANTASLKPIKMCCGVFRQTLSTTTSDRVGSPARRKTNGNRIIRSSSDPAACTCPASYLELHPVASSHFAKCFQSIKHQSDRGKVDGQLKHRALREISKERPHSLVDLKTYKDTKILVAKFLQHSNCNLAPEVQHVVDNIRSVIKSDERHMEEAIYSANVIDQVMTSSQHPMNMLRLRLQDLHLQSCGDLSSPSASVRTVRVGRRLEHEHSHSLIGVCRETIL
SIO_010081: fam189a1
subclass of: SO_0000673
so part of: fam189a1
location: join(549361..549585,575969..576025,595950..596060,599231..599362,600177..600284,601236..601396,604006..604141,609753..609840,611240..611716,614285..614607,614827..615009)
location: region:549361-615009:1
so has part: feature:549361-549585:1:exon
so has part: feature:575969-576025:1:exon
so has part: feature:595950-596060:1:exon
so has part: feature:599231-599362:1:exon
so has part: feature:600177-600284:1:exon
so has part: feature:601236-601396:1:exon
so has part: feature:604006-604141:1:exon
so has part: feature:609753-609840:1:exon
so has part: feature:611240-611716:1:exon
so has part: feature:614285-614607:1:exon
so has part: feature:614827-615009:1:exon

XP_038640022.1
type: Protein
SIO_000068: ncbiprotein

position:549361:1
position: 549361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615009:1
position: 615009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549361-549585:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:575969-576025:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595950-596060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:599231-599362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:600177-600284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:601236-601396:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:604006-604141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:609753-609840:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:611240-611716:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:614285-614607:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:614827-615009:1:exon

fam189a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: fam189a1
product: family with sequence similarity 189 member A1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038784097.1
SIO_010081: fam189a1
subclass of: SO_0000673
so part of: fam189a1
location: join(565798..565859,575969..576025,595950..596060,599231..599362,600177..600284,601236..601396,604006..604141,609753..609840,611240..611716,614285..614607,614827..616125)
location: region:565798-616125:1
so has part: feature:565798-565859:1:exon
so has part: feature:575969-576025:1:exon
so has part: feature:595950-596060:1:exon
so has part: feature:599231-599362:1:exon
so has part: feature:600177-600284:1:exon
so has part: feature:601236-601396:1:exon
so has part: feature:604006-604141:1:exon
so has part: feature:609753-609840:1:exon
so has part: feature:611240-611716:1:exon
so has part: feature:614285-614607:1:exon
so has part: feature:614827-616125:1:exon

position:565798:1
position: 565798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565798-565859:1:exon

position:565859:1
position: 565859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:575969-576025:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595950-596060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:599231-599362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:600177-600284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:601236-601396:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:604006-604141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:609753-609840:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:611240-611716:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:614285-614607:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:614827-616125:1:exon

fam189a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: fam189a1
product: family with sequence similarity 189 member A1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038784095.1
SIO_010081: fam189a1
subclass of: SO_0000673
so part of: fam189a1
location: join(565883..565914,575969..576025,595950..596060,599231..599362,600177..600284,601236..601396,604006..604141,609753..609840,611240..611716,614285..614607,614827..616125)
location: region:565883-616125:1
so has part: feature:565883-565914:1:exon
so has part: feature:575969-576025:1:exon
so has part: feature:595950-596060:1:exon
so has part: feature:599231-599362:1:exon
so has part: feature:600177-600284:1:exon
so has part: feature:601236-601396:1:exon
so has part: feature:604006-604141:1:exon
so has part: feature:609753-609840:1:exon
so has part: feature:611240-611716:1:exon
so has part: feature:614285-614607:1:exon
so has part: feature:614827-616125:1:exon

position:565883:1
position: 565883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565883-565914:1:exon

position:565914:1
position: 565914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:575969-576025:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595950-596060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:599231-599362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:600177-600284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:601236-601396:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:604006-604141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:609753-609840:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:611240-611716:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:614285-614607:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:614827-616125:1:exon

fam189a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: fam189a1
product: family with sequence similarity 189 member A1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038784096.1
SIO_010081: fam189a1
subclass of: SO_0000673
so part of: fam189a1
location: join(573851..574001,575969..576025,595950..596060,599231..599362,600177..600284,601236..601396,604006..604141,609753..609840,611240..611716,614285..614607,614827..616125)
location: region:573851-616125:1
so has part: feature:573851-574001:1:exon
so has part: feature:575969-576025:1:exon
so has part: feature:595950-596060:1:exon
so has part: feature:599231-599362:1:exon
so has part: feature:600177-600284:1:exon
so has part: feature:601236-601396:1:exon
so has part: feature:604006-604141:1:exon
so has part: feature:609753-609840:1:exon
so has part: feature:611240-611716:1:exon
so has part: feature:614285-614607:1:exon
so has part: feature:614827-616125:1:exon

position:573851:1
position: 573851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573851-574001:1:exon

position:574001:1
position: 574001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:575969-576025:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595950-596060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:599231-599362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:600177-600284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:601236-601396:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:604006-604141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:609753-609840:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:611240-611716:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:614285-614607:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:614827-616125:1:exon

fam189a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: fam189a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM189A1 isoform X2
translation: MLLSAVCVMLNLAGSILSCQNAQMVTSLGECQLYKFDGDGVCVCCEIQEQTKGCSTFSETLKLNPVRECSRVRLALKDLLFSICALNVISTIVCALATAMCCMQMVTADIMQILIPQRLRASNPDCVSAHGIDLQQPLDFDEFIPPIPPPPYYPPEYTCSSGVEAQRDLHLDFPHSPFDTMYSVAINSPRSLYPAELPPPYEVVVGETSTSQVNLLHHHSSEQNSSSTLCDGSTSAAFNTQVFVDNASLTLCEPTDAPVCNGLSGDCCSSEVQESVPAANSAIPAFAMDRGPTSLETDVRWRHRTYSESSHEEGSSSPALSQGCEHRLSECAGLSTVGKKTHAPAQANTASLKPIKMCCGVFRQTLSTTTSDRVGSPARRKTNGNRIIRSSSDPAACTCPASYLELHPVASSHFAKCFQSIKHQSDRGKVDGQLKHRALREISKERPHSLVDLKTYKDTKILVAKFLQHSNCNLAPEVQHVVDNIRSVIKSDERHMEEAIYSANVIDQVMTSSQHPMNMLRLRLQDLHLQSCGDLSSPSASVRTVRVGRRLEHEHSHSLIGVCRETIL
SIO_010081: fam189a1
subclass of: SO_0000673
so part of: fam189a1
location: join(595962..596060,599231..599362,600177..600284,601236..601396,604006..604141,609753..609840,611240..611716,614285..614607,614827..615009)
location: region:595962-615009:1
so has part: feature:595962-596060:1:exon
so has part: feature:599231-599362:1:exon
so has part: feature:600177-600284:1:exon
so has part: feature:601236-601396:1:exon
so has part: feature:604006-604141:1:exon
so has part: feature:609753-609840:1:exon
so has part: feature:611240-611716:1:exon
so has part: feature:614285-614607:1:exon
so has part: feature:614827-615009:1:exon

XP_038640023.1
type: Protein
SIO_000068: ncbiprotein

position:595962:1
position: 595962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595962-596060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599231-599362:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:600177-600284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:601236-601396:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604006-604141:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:609753-609840:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611240-611716:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614285-614607:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:614827-615009:1:exon

fam189a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: fam189a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM189A1 isoform X2
translation: MLLSAVCVMLNLAGSILSCQNAQMVTSLGECQLYKFDGDGVCVCCEIQEQTKGCSTFSETLKLNPVRECSRVRLALKDLLFSICALNVISTIVCALATAMCCMQMVTADIMQILIPQRLRASNPDCVSAHGIDLQQPLDFDEFIPPIPPPPYYPPEYTCSSGVEAQRDLHLDFPHSPFDTMYSVAINSPRSLYPAELPPPYEVVVGETSTSQVNLLHHHSSEQNSSSTLCDGSTSAAFNTQVFVDNASLTLCEPTDAPVCNGLSGDCCSSEVQESVPAANSAIPAFAMDRGPTSLETDVRWRHRTYSESSHEEGSSSPALSQGCEHRLSECAGLSTVGKKTHAPAQANTASLKPIKMCCGVFRQTLSTTTSDRVGSPARRKTNGNRIIRSSSDPAACTCPASYLELHPVASSHFAKCFQSIKHQSDRGKVDGQLKHRALREISKERPHSLVDLKTYKDTKILVAKFLQHSNCNLAPEVQHVVDNIRSVIKSDERHMEEAIYSANVIDQVMTSSQHPMNMLRLRLQDLHLQSCGDLSSPSASVRTVRVGRRLEHEHSHSLIGVCRETIL
SIO_010081: fam189a1
subclass of: SO_0000673
so part of: fam189a1
location: join(595962..596060,599231..599362,600177..600284,601236..601396,604006..604141,609753..609840,611240..611716,614285..614607,614827..615009)
location: region:595962-615009:1
so has part: feature:595962-596060:1:exon
so has part: feature:599231-599362:1:exon
so has part: feature:600177-600284:1:exon
so has part: feature:601236-601396:1:exon
so has part: feature:604006-604141:1:exon
so has part: feature:609753-609840:1:exon
so has part: feature:611240-611716:1:exon
so has part: feature:614285-614607:1:exon
so has part: feature:614827-615009:1:exon

XP_038640024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:595962-596060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599231-599362:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:600177-600284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:601236-601396:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604006-604141:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:609753-609840:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611240-611716:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614285-614607:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:614827-615009:1:exon

fam189a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: fam189a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM189A1 isoform X2
translation: MLLSAVCVMLNLAGSILSCQNAQMVTSLGECQLYKFDGDGVCVCCEIQEQTKGCSTFSETLKLNPVRECSRVRLALKDLLFSICALNVISTIVCALATAMCCMQMVTADIMQILIPQRLRASNPDCVSAHGIDLQQPLDFDEFIPPIPPPPYYPPEYTCSSGVEAQRDLHLDFPHSPFDTMYSVAINSPRSLYPAELPPPYEVVVGETSTSQVNLLHHHSSEQNSSSTLCDGSTSAAFNTQVFVDNASLTLCEPTDAPVCNGLSGDCCSSEVQESVPAANSAIPAFAMDRGPTSLETDVRWRHRTYSESSHEEGSSSPALSQGCEHRLSECAGLSTVGKKTHAPAQANTASLKPIKMCCGVFRQTLSTTTSDRVGSPARRKTNGNRIIRSSSDPAACTCPASYLELHPVASSHFAKCFQSIKHQSDRGKVDGQLKHRALREISKERPHSLVDLKTYKDTKILVAKFLQHSNCNLAPEVQHVVDNIRSVIKSDERHMEEAIYSANVIDQVMTSSQHPMNMLRLRLQDLHLQSCGDLSSPSASVRTVRVGRRLEHEHSHSLIGVCRETIL
SIO_010081: fam189a1
subclass of: SO_0000673
so part of: fam189a1
location: join(595962..596060,599231..599362,600177..600284,601236..601396,604006..604141,609753..609840,611240..611716,614285..614607,614827..615009)
location: region:595962-615009:1
so has part: feature:595962-596060:1:exon
so has part: feature:599231-599362:1:exon
so has part: feature:600177-600284:1:exon
so has part: feature:601236-601396:1:exon
so has part: feature:604006-604141:1:exon
so has part: feature:609753-609840:1:exon
so has part: feature:611240-611716:1:exon
so has part: feature:614285-614607:1:exon
so has part: feature:614827-615009:1:exon

XP_038640025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:595962-596060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599231-599362:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:600177-600284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:601236-601396:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604006-604141:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:609753-609840:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611240-611716:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614285-614607:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:614827-615009:1:exon

apba2b
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: apba2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(616267..699942)
location: region:616267-699942:-1
so has part: feature:616267-699942:-1:exon
subclass of: SO_0000010

119956744
type: Gene
SIO_000068: ncbigene

position:616267:-1
position: 616267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699942:-1
position: 699942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616267-699942:-1:exon

apba2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: apba2b
product: amyloid beta (A4) precursor protein-binding, family A, member 2b, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_038784093.1
SIO_010081: apba2b
subclass of: SO_0000673
so part of: apba2b
location: complement(join(616267..617247,618220..618360,627598..627717,635772..635984,638080..638259,638711..638896,645099..645185,645746..645781,647900..648039,651170..651209,657688..657768,660590..661542,699809..699942))
location: region:616267-699942:-1
so has part: feature:699809-699942:-1:exon
so has part: feature:660590-661542:-1:exon
so has part: feature:657688-657768:-1:exon
so has part: feature:651170-651209:-1:exon
so has part: feature:647900-648039:-1:exon
so has part: feature:645746-645781:-1:exon
so has part: feature:645099-645185:-1:exon
so has part: feature:638711-638896:-1:exon
so has part: feature:638080-638259:-1:exon
so has part: feature:635772-635984:-1:exon
so has part: feature:627598-627717:-1:exon
so has part: feature:618220-618360:-1:exon
so has part: feature:616267-617247:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:699809-699942:-1:exon

position:699809:-1
position: 699809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:660590-661542:-1:exon

position:660590:-1
position: 660590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661542:-1
position: 661542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:657688-657768:-1:exon

position:657688:-1
position: 657688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657768:-1
position: 657768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:651170-651209:-1:exon

position:651170:-1
position: 651170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651209:-1
position: 651209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:647900-648039:-1:exon

position:647900:-1
position: 647900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648039:-1
position: 648039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:645746-645781:-1:exon

position:645746:-1
position: 645746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645781:-1
position: 645781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:645099-645185:-1:exon

position:645099:-1
position: 645099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645185:-1
position: 645185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:638711-638896:-1:exon

position:638711:-1
position: 638711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638896:-1
position: 638896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:638080-638259:-1:exon

position:638080:-1
position: 638080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638259:-1
position: 638259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:635772-635984:-1:exon

position:635772:-1
position: 635772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635984:-1
position: 635984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:627598-627717:-1:exon

position:627598:-1
position: 627598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627717:-1
position: 627717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:618220-618360:-1:exon

position:618220:-1
position: 618220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618360:-1
position: 618360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:616267-617247:-1:exon

position:617247:-1
position: 617247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

apba2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: apba2b
product: amyloid beta (A4) precursor protein-binding, family A, member 2b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_038784091.1
SIO_010081: apba2b
subclass of: SO_0000673
so part of: apba2b
location: complement(join(616267..617247,618220..618360,627598..627717,635772..635984,638080..638259,638711..638896,645099..645185,645746..645781,647900..648045,651170..651209,657688..657768,660590..661542,699809..699942))
location: region:616267-699942:-1
so has part: feature:699809-699942:-1:exon
so has part: feature:660590-661542:-1:exon
so has part: feature:657688-657768:-1:exon
so has part: feature:651170-651209:-1:exon
so has part: feature:647900-648045:-1:exon
so has part: feature:645746-645781:-1:exon
so has part: feature:645099-645185:-1:exon
so has part: feature:638711-638896:-1:exon
so has part: feature:638080-638259:-1:exon
so has part: feature:635772-635984:-1:exon
so has part: feature:627598-627717:-1:exon
so has part: feature:618220-618360:-1:exon
so has part: feature:616267-617247:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:699809-699942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:660590-661542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:657688-657768:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651170-651209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647900-648045:-1:exon

position:648045:-1
position: 648045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:645746-645781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:645099-645185:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638711-638896:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:638080-638259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:635772-635984:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:627598-627717:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:618220-618360:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:616267-617247:-1:exon

apba2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: apba2b
product: amyloid beta (A4) precursor protein-binding, family A, member 2b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_038784092.1
SIO_010081: apba2b
subclass of: SO_0000673
so part of: apba2b
location: complement(join(616267..617247,618220..618360,627598..627717,635772..635984,638080..638259,638711..638896,645099..645185,645746..645781,647900..648045,651170..651209,657688..657768,660590..661542,670641..671011))
location: region:616267-671011:-1
so has part: feature:670641-671011:-1:exon
so has part: feature:660590-661542:-1:exon
so has part: feature:657688-657768:-1:exon
so has part: feature:651170-651209:-1:exon
so has part: feature:647900-648045:-1:exon
so has part: feature:645746-645781:-1:exon
so has part: feature:645099-645185:-1:exon
so has part: feature:638711-638896:-1:exon
so has part: feature:638080-638259:-1:exon
so has part: feature:635772-635984:-1:exon
so has part: feature:627598-627717:-1:exon
so has part: feature:618220-618360:-1:exon
so has part: feature:616267-617247:-1:exon

position:671011:-1
position: 671011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670641-671011:-1:exon

position:670641:-1
position: 670641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:660590-661542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:657688-657768:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651170-651209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647900-648045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645746-645781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:645099-645185:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638711-638896:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:638080-638259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:635772-635984:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:627598-627717:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:618220-618360:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:616267-617247:-1:exon

apba2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: apba2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-beta A4 precursor protein-binding family A member 2 isoform X2
translation: MMASSSVEPGVAPSSTPPHCQEEPKHQPSEDWQEDGKESSAIVLDVNPCENPGDADSSSDYVNNTSEEEEDYDEGLPEEEEGVTYYIRYCPEEDSYLDDIGCIGEDYRTQDISAEAADDCQEAVEEAWAESNGHSQPMTEESEDHGCEGDGQLEESDSTVAHAEMGSEGIGNNEGTPREYSPSKHVTQSPQSPQASWHQCSKFEVDAEDAEEDIDQIVAEIKMSMSVSSLNSVGEQNLEESVKGKLDRNQAGCHGRGEGRPRLCQATASDGKSGEAPFTEKPGLRSSEERKQWNSGQETPDIEQSRKQQRSDLNGPVNNNYLSEQTKKPSTFPNFVDGPCEPEDLIDGIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVGRIKRVQKTSKTKKKGVSDGDSQPMTEVDLFISTQRIKVLNADSQEPMMDHALRTISYIADIGNIVVLMARRRVPRAASQDCIESTPGSLETKKQYKMVCHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDIINTQEMYNDDLVHFSNSANCKELHVEKLKGEIFGVVIVESGWGSILPTVILANMMNAGPAARSGKLSIGDQIMSINGTSLVGLPLTTCQGIIKGLKNQVEVKLNIVSCPPVTTVLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPAAMFRLLTGQETPLYI
SIO_010081: apba2b
subclass of: SO_0000673
so part of: apba2b
location: complement(join(617176..617247,618220..618360,627598..627717,635772..635984,638080..638259,638711..638896,645099..645185,645746..645781,647900..648039,651170..651209,657688..657768,660590..661480))
location: region:617176-661480:-1
so has part: feature:660590-661480:-1:exon
so has part: feature:657688-657768:-1:exon
so has part: feature:651170-651209:-1:exon
so has part: feature:647900-648039:-1:exon
so has part: feature:645746-645781:-1:exon
so has part: feature:645099-645185:-1:exon
so has part: feature:638711-638896:-1:exon
so has part: feature:638080-638259:-1:exon
so has part: feature:635772-635984:-1:exon
so has part: feature:627598-627717:-1:exon
so has part: feature:618220-618360:-1:exon
so has part: feature:617176-617247:-1:exon

XP_038640021.1
type: Protein
SIO_000068: ncbiprotein

position:617176:-1
position: 617176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661480:-1
position: 661480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660590-661480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:657688-657768:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:651170-651209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647900-648039:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:645746-645781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645099-645185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:638711-638896:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638080-638259:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:635772-635984:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:627598-627717:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:618220-618360:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:617176-617247:-1:exon

apba2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: apba2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-beta A4 precursor protein-binding family A member 2 isoform X1
translation: MMASSSVEPGVAPSSTPPHCQEEPKHQPSEDWQEDGKESSAIVLDVNPCENPGDADSSSDYVNNTSEEEEDYDEGLPEEEEGVTYYIRYCPEEDSYLDDIGCIGEDYRTQDISAEAADDCQEAVEEAWAESNGHSQPMTEESEDHGCEGDGQLEESDSTVAHAEMGSEGIGNNEGTPREYSPSKHVTQSPQSPQASWHQCSKFEVDAEDAEEDIDQIVAEIKMSMSVSSLNSVGEQNLEESVKGKLDRNQAGCHGRGEGRPRLCQATASDGKSGEAPFTEKPGLRSSEERKQWNSGQETPDIEQSRKQQRSDLNGPVNNNYLSEQTKKPSTFPNFVDVPGPCEPEDLIDGIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVGRIKRVQKTSKTKKKGVSDGDSQPMTEVDLFISTQRIKVLNADSQEPMMDHALRTISYIADIGNIVVLMARRRVPRAASQDCIESTPGSLETKKQYKMVCHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDIINTQEMYNDDLVHFSNSANCKELHVEKLKGEIFGVVIVESGWGSILPTVILANMMNAGPAARSGKLSIGDQIMSINGTSLVGLPLTTCQGIIKGLKNQVEVKLNIVSCPPVTTVLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPAAMFRLLTGQETPLYI
SIO_010081: apba2b
subclass of: SO_0000673
so part of: apba2b
location: complement(join(617176..617247,618220..618360,627598..627717,635772..635984,638080..638259,638711..638896,645099..645185,645746..645781,647900..648045,651170..651209,657688..657768,660590..661480))
location: region:617176-661480:-1
so has part: feature:660590-661480:-1:exon
so has part: feature:657688-657768:-1:exon
so has part: feature:651170-651209:-1:exon
so has part: feature:647900-648045:-1:exon
so has part: feature:645746-645781:-1:exon
so has part: feature:645099-645185:-1:exon
so has part: feature:638711-638896:-1:exon
so has part: feature:638080-638259:-1:exon
so has part: feature:635772-635984:-1:exon
so has part: feature:627598-627717:-1:exon
so has part: feature:618220-618360:-1:exon
so has part: feature:617176-617247:-1:exon

XP_038640019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:660590-661480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:657688-657768:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:651170-651209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647900-648045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:645746-645781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645099-645185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:638711-638896:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638080-638259:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:635772-635984:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:627598-627717:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:618220-618360:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:617176-617247:-1:exon

apba2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: apba2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-beta A4 precursor protein-binding family A member 2 isoform X1
translation: MMASSSVEPGVAPSSTPPHCQEEPKHQPSEDWQEDGKESSAIVLDVNPCENPGDADSSSDYVNNTSEEEEDYDEGLPEEEEGVTYYIRYCPEEDSYLDDIGCIGEDYRTQDISAEAADDCQEAVEEAWAESNGHSQPMTEESEDHGCEGDGQLEESDSTVAHAEMGSEGIGNNEGTPREYSPSKHVTQSPQSPQASWHQCSKFEVDAEDAEEDIDQIVAEIKMSMSVSSLNSVGEQNLEESVKGKLDRNQAGCHGRGEGRPRLCQATASDGKSGEAPFTEKPGLRSSEERKQWNSGQETPDIEQSRKQQRSDLNGPVNNNYLSEQTKKPSTFPNFVDVPGPCEPEDLIDGIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVGRIKRVQKTSKTKKKGVSDGDSQPMTEVDLFISTQRIKVLNADSQEPMMDHALRTISYIADIGNIVVLMARRRVPRAASQDCIESTPGSLETKKQYKMVCHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDIINTQEMYNDDLVHFSNSANCKELHVEKLKGEIFGVVIVESGWGSILPTVILANMMNAGPAARSGKLSIGDQIMSINGTSLVGLPLTTCQGIIKGLKNQVEVKLNIVSCPPVTTVLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPAAMFRLLTGQETPLYI
SIO_010081: apba2b
subclass of: SO_0000673
so part of: apba2b
location: complement(join(617176..617247,618220..618360,627598..627717,635772..635984,638080..638259,638711..638896,645099..645185,645746..645781,647900..648045,651170..651209,657688..657768,660590..661480))
location: region:617176-661480:-1
so has part: feature:660590-661480:-1:exon
so has part: feature:657688-657768:-1:exon
so has part: feature:651170-651209:-1:exon
so has part: feature:647900-648045:-1:exon
so has part: feature:645746-645781:-1:exon
so has part: feature:645099-645185:-1:exon
so has part: feature:638711-638896:-1:exon
so has part: feature:638080-638259:-1:exon
so has part: feature:635772-635984:-1:exon
so has part: feature:627598-627717:-1:exon
so has part: feature:618220-618360:-1:exon
so has part: feature:617176-617247:-1:exon

XP_038640020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:660590-661480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:657688-657768:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:651170-651209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647900-648045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:645746-645781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645099-645185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:638711-638896:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:638080-638259:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:635772-635984:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:627598-627717:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:618220-618360:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:617176-617247:-1:exon

LOC119956747
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956747
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(656005..656659)
location: region:656005-656659:-1
so has part: feature:656005-656659:-1:exon
subclass of: SO_0000011

119956747
type: Gene
SIO_000068: ncbigene

position:656005:-1
position: 656005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656659:-1
position: 656659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656005-656659:-1:exon

LOC119956747
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7830
nc RNA class: lncRNA
gene: LOC119956747
product: uncharacterized LOC119956747
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005458671.1
SIO_010081: LOC119956747
subclass of: SO_0000673
so part of: LOC119956747
location: complement(join(656005..656022,656059..656138,656331..656659))
location: region:656005-656659:-1
so has part: feature:656331-656659:-1:exon
so has part: feature:656059-656138:-1:exon
so has part: feature:656005-656022:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:656331-656659:-1:exon

position:656331:-1
position: 656331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:656059-656138:-1:exon

position:656059:-1
position: 656059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656138:-1
position: 656138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:656005-656022:-1:exon

position:656022:-1
position: 656022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119956746
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956746
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(656698..657315)
location: region:656698-657315:-1
so has part: feature:656698-657315:-1:exon
subclass of: SO_0000011

119956746
type: Gene
SIO_000068: ncbigene

position:656698:-1
position: 656698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657315:-1
position: 657315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656698-657315:-1:exon

LOC119956746
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7830
nc RNA class: lncRNA
gene: LOC119956746
product: uncharacterized LOC119956746
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005458670.1
SIO_010081: LOC119956746
subclass of: SO_0000673
so part of: LOC119956746
location: complement(join(656698..656843,656970..657177,657294..657315))
location: region:656698-657315:-1
so has part: feature:657294-657315:-1:exon
so has part: feature:656970-657177:-1:exon
so has part: feature:656698-656843:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:657294-657315:-1:exon

position:657294:-1
position: 657294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:656970-657177:-1:exon

position:656970:-1
position: 656970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657177:-1
position: 657177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:656698-656843:-1:exon

position:656843:-1
position: 656843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mphosph10
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: mphosph10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 711024..746026
location: region:711024-746026:1
so has part: feature:711024-746026:1:exon
subclass of: SO_0000010

119956853
type: Gene
SIO_000068: ncbigene

position:711024:1
position: 711024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746026:1
position: 746026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:711024-746026:1:exon

mphosph10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: mphosph10
product: M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_038784358.1
SIO_010081: mphosph10
subclass of: SO_0000673
so part of: mphosph10
location: join(711024..711158,714246..714942,718626..718777,719552..719720,720490..720631,722062..722129,725466..725603,728737..728847,742600..742707,743716..743946,745794..746026)
location: region:711024-746026:1
so has part: feature:711024-711158:1:exon
so has part: feature:714246-714942:1:exon
so has part: feature:718626-718777:1:exon
so has part: feature:719552-719720:1:exon
so has part: feature:720490-720631:1:exon
so has part: feature:722062-722129:1:exon
so has part: feature:725466-725603:1:exon
so has part: feature:728737-728847:1:exon
so has part: feature:742600-742707:1:exon
so has part: feature:743716-743946:1:exon
so has part: feature:745794-746026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:711024-711158:1:exon

position:711158:1
position: 711158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:714246-714942:1:exon

position:714246:1
position: 714246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714942:1
position: 714942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:718626-718777:1:exon

position:718626:1
position: 718626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718777:1
position: 718777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:719552-719720:1:exon

position:719552:1
position: 719552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719720:1
position: 719720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:720490-720631:1:exon

position:720490:1
position: 720490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720631:1
position: 720631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:722062-722129:1:exon

position:722062:1
position: 722062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722129:1
position: 722129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:725466-725603:1:exon

position:725466:1
position: 725466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725603:1
position: 725603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:728737-728847:1:exon

position:728737:1
position: 728737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728847:1
position: 728847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:742600-742707:1:exon

position:742600:1
position: 742600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742707:1
position: 742707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:743716-743946:1:exon

position:743716:1
position: 743716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743946:1
position: 743946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:745794-746026:1:exon

position:745794:1
position: 745794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mphosph10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: mphosph10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U3 small nucleolar ribonucleoprotein protein MPP10
translation: MAALAESARRLERAVQKPELLLSVQDGLALDFTVLTKELYDLQKAQESDTTAGSPLKELVIEQFDEEQIWQEIELQNHSVLNYFKDTVAFLLQSPFSRLINTGDVEIEAPEEDIENNESAETDGEIVEGSDGEEEELKKQAIKRKPIQRENASDELSDEDSDLNFDIDEVEERTKLQRKCSRFASNSELDDKFFRLSEMEDFLEKVEKEEEKQKDNDEIDYFEDIPSEDEELGDYFEDVPSEDDEVVLKTKTKIKTKSSRNLQYKDFFDPVDGEKPAVEGGDEENGSVEAEGEPEPEFEEEEEINEDQEEVAESKNGQEAKGVHKKVTFDLSDDSDGDESAVSTGAKKPDETKSAFEKRQEKLNAQIQQLEKSALEQKPWQLLGEVTAQKRPENSLLEEDLLFDHAVRKAPVITEETTLQLEDIILQRIKDQAWDDVVRKEKPKEEIFEYKKRLTLDHEKSKLSLAEVYEQQYLKQTEQKSEVEESVQHAEIQKFMDSLFLKLDALSNFQFTPKPPVPEVKVVSNLPSISMEEVAPVNISDATLLAPEEVKEKSRAGDVQGDLEKTETDKKRERRRKKKVKRLRLRAKAAHQKVLEKLNVKLSTDQVKEKNAEKVKQLTQEGKALLLKDEGKDKTLRSSKAFFSQLQDQVKAELKGAKIGAKKQNKHRELSASKLKL
SIO_010081: mphosph10
subclass of: SO_0000673
so part of: mphosph10
location: join(711091..711158,714246..714942,718626..718777,719552..719720,720490..720631,722062..722129,725466..725603,728737..728847,742600..742707,743716..743946,745794..745943)
location: region:711091-745943:1
so has part: feature:711091-711158:1:exon
so has part: feature:714246-714942:1:exon
so has part: feature:718626-718777:1:exon
so has part: feature:719552-719720:1:exon
so has part: feature:720490-720631:1:exon
so has part: feature:722062-722129:1:exon
so has part: feature:725466-725603:1:exon
so has part: feature:728737-728847:1:exon
so has part: feature:742600-742707:1:exon
so has part: feature:743716-743946:1:exon
so has part: feature:745794-745943:1:exon

XP_038640286.1
type: Protein
SIO_000068: ncbiprotein

position:711091:1
position: 711091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745943:1
position: 745943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:711091-711158:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714246-714942:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718626-718777:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:719552-719720:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:720490-720631:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722062-722129:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:725466-725603:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:728737-728847:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:742600-742707:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:743716-743946:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:745794-745943:1:exon

fan1
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: fan1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 746598..771206
location: region:746598-771206:1
so has part: feature:746598-771206:1:exon
subclass of: SO_0000010

119956712
type: Gene
SIO_000068: ncbigene

position:746598:1
position: 746598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771206:1
position: 771206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:746598-771206:1:exon

fan1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: fan1
product: FANCD2 and FANCI associated nuclease 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038784049.1
SIO_010081: fan1
subclass of: SO_0000673
so part of: fan1
location: join(746598..746642,749246..749531,753063..753203,757914..758112,762681..762914,763137..763268,766472..766580,767100..767219,767557..767721,768330..768495,768575..768678,769366..769560,769895..770023,770763..771206)
location: region:746598-771206:1
so has part: feature:746598-746642:1:exon
so has part: feature:749246-749531:1:exon
so has part: feature:753063-753203:1:exon
so has part: feature:757914-758112:1:exon
so has part: feature:762681-762914:1:exon
so has part: feature:763137-763268:1:exon
so has part: feature:766472-766580:1:exon
so has part: feature:767100-767219:1:exon
so has part: feature:767557-767721:1:exon
so has part: feature:768330-768495:1:exon
so has part: feature:768575-768678:1:exon
so has part: feature:769366-769560:1:exon
so has part: feature:769895-770023:1:exon
so has part: feature:770763-771206:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:746598-746642:1:exon

position:746642:1
position: 746642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:749246-749531:1:exon

position:749246:1
position: 749246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749531:1
position: 749531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:753063-753203:1:exon

position:753063:1
position: 753063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753203:1
position: 753203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:757914-758112:1:exon

position:757914:1
position: 757914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758112:1
position: 758112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:762681-762914:1:exon

position:762681:1
position: 762681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762914:1
position: 762914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:763137-763268:1:exon

position:763137:1
position: 763137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763268:1
position: 763268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:766472-766580:1:exon

position:766472:1
position: 766472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766580:1
position: 766580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:767100-767219:1:exon

position:767100:1
position: 767100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767219:1
position: 767219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:767557-767721:1:exon

position:767557:1
position: 767557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767721:1
position: 767721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:768330-768495:1:exon

position:768330:1
position: 768330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768495:1
position: 768495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:768575-768678:1:exon

position:768575:1
position: 768575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768678:1
position: 768678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:769366-769560:1:exon

position:769366:1
position: 769366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769560:1
position: 769560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:769895-770023:1:exon

position:769895:1
position: 769895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770023:1
position: 770023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:770763-771206:1:exon

position:770763:1
position: 770763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fan1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: fan1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fanconi-associated nuclease 1
translation: MITVIGLEGAVQGTLTEGPGGPGRGEGPGGLGRGEGPGRGEGPGGPGQGEGLLGLGQGEGPLGLGRTDGFPLPYYLRNFLIALQAVLRSEDKELFDEGDALWLGMFQNLSAAGQMLYVRLFQRKLKWLKVIKLSYAEIGEDLTPTIEELRLAGLLQTGSELCDVSEALDLLSAPELKLLAKSFHLRTQGQRAEILKSLLRLAKQQSIFSSKQKPSSPGLTILNRAKAVIGHCVRVAALGRAVFSRLLLLFNLTDWTDEEEVSSPGRSPLSTLLKVNMGHVTFPSYTVQREKKIFQHRDDLLRYTEAVHSLAEVGCAVANGTWSEALHLCKTARETWIQLEKSSDVGFHQDLPVYLRCFTAGWVYTRIRYRGVEILQRLHMYEEAVEELQSLLEQSTYCLESRGHWWNRLTLNLHQHLKRTDQAIHCLWKGLDDVWVHTGYRLALYQRALRIRDSPSCRKWHHLLQDVPVMRVEDVPHVTIKGRTCPGMGNALFLMSDPSEGPNLGQGEPCSTVICSVEEISLAHYKQQGFDQGIHGEGATFLTLFGLLFWDIIFLSGIPDVFRNPYQAGPLDLYTDCFYQHRKTPIESRVEFLQDAPIETLHRLITEVWDNHRDTTTTLINWRIFSSLQQAQSLVSCLGSLFLSGICSILAKDLRHSRGGLPDLVVWNSHSLQYKLAEVKGPSDQLSHKQMVWLDQLRRLGADVEVCHVSAVGARSYKLS
SIO_010081: fan1
subclass of: SO_0000673
so part of: fan1
location: join(746598..746642,749246..749531,753063..753203,757914..758112,762681..762914,763137..763268,766472..766580,767100..767219,767557..767721,768330..768495,768575..768678,769366..769560,769895..770023,770763..770900)
location: region:746598-770900:1
so has part: feature:746598-746642:1:exon
so has part: feature:749246-749531:1:exon
so has part: feature:753063-753203:1:exon
so has part: feature:757914-758112:1:exon
so has part: feature:762681-762914:1:exon
so has part: feature:763137-763268:1:exon
so has part: feature:766472-766580:1:exon
so has part: feature:767100-767219:1:exon
so has part: feature:767557-767721:1:exon
so has part: feature:768330-768495:1:exon
so has part: feature:768575-768678:1:exon
so has part: feature:769366-769560:1:exon
so has part: feature:769895-770023:1:exon
so has part: feature:770763-770900:1:exon

XP_038639977.1
type: Protein
SIO_000068: ncbiprotein

position:770900:1
position: 770900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:746598-746642:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:749246-749531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:753063-753203:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:757914-758112:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:762681-762914:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:763137-763268:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:766472-766580:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:767100-767219:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767557-767721:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:768330-768495:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:768575-768678:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:769366-769560:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:769895-770023:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:770763-770900:1:exon

mtmr10
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: mtmr10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(778410..816544)
location: region:778410-816544:-1
so has part: feature:778410-816544:-1:exon
subclass of: SO_0000010

119956836
type: Gene
SIO_000068: ncbigene

position:778410:-1
position: 778410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816544:-1
position: 816544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778410-816544:-1:exon

mtmr10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: mtmr10
product: myotubularin related protein 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038784315.1
SIO_010081: mtmr10
subclass of: SO_0000673
so part of: mtmr10
location: complement(join(778410..779997,780488..780667,783311..783481,788767..788939,790754..790824,791351..791420,797519..797649,799555..799643,800640..800727,800855..800996,802212..802302,805851..805993,809567..809639,811170..811306,813468..814261))
location: region:778410-814261:-1
so has part: feature:813468-814261:-1:exon
so has part: feature:811170-811306:-1:exon
so has part: feature:809567-809639:-1:exon
so has part: feature:805851-805993:-1:exon
so has part: feature:802212-802302:-1:exon
so has part: feature:800855-800996:-1:exon
so has part: feature:800640-800727:-1:exon
so has part: feature:799555-799643:-1:exon
so has part: feature:797519-797649:-1:exon
so has part: feature:791351-791420:-1:exon
so has part: feature:790754-790824:-1:exon
so has part: feature:788767-788939:-1:exon
so has part: feature:783311-783481:-1:exon
so has part: feature:780488-780667:-1:exon
so has part: feature:778410-779997:-1:exon

position:814261:-1
position: 814261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813468-814261:-1:exon

position:813468:-1
position: 813468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:811170-811306:-1:exon

position:811170:-1
position: 811170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811306:-1
position: 811306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:809567-809639:-1:exon

position:809567:-1
position: 809567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809639:-1
position: 809639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:805851-805993:-1:exon

position:805851:-1
position: 805851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805993:-1
position: 805993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:802212-802302:-1:exon

position:802212:-1
position: 802212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802302:-1
position: 802302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:800855-800996:-1:exon

position:800855:-1
position: 800855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800996:-1
position: 800996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:800640-800727:-1:exon

position:800640:-1
position: 800640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800727:-1
position: 800727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:799555-799643:-1:exon

position:799555:-1
position: 799555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799643:-1
position: 799643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:797519-797649:-1:exon

position:797519:-1
position: 797519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797649:-1
position: 797649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:791351-791420:-1:exon

position:791351:-1
position: 791351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791420:-1
position: 791420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:790754-790824:-1:exon

position:790754:-1
position: 790754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790824:-1
position: 790824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:788767-788939:-1:exon

position:788767:-1
position: 788767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788939:-1
position: 788939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:783311-783481:-1:exon

position:783311:-1
position: 783311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783481:-1
position: 783481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:780488-780667:-1:exon

position:780488:-1
position: 780488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780667:-1
position: 780667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:778410-779997:-1:exon

position:779997:-1
position: 779997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mtmr10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: mtmr10
product: myotubularin related protein 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038784317.1
SIO_010081: mtmr10
subclass of: SO_0000673
so part of: mtmr10
location: complement(join(779401..779997,780488..780667,783311..783481,788767..788939,790754..790824,791351..791420,797519..797649,799555..799643,800640..800727,800855..800996,802212..802302,805851..805993,809567..809639,811170..811306,816309..816366,816461..816544))
location: region:779401-816544:-1
so has part: feature:816461-816544:-1:exon
so has part: feature:816309-816366:-1:exon
so has part: feature:811170-811306:-1:exon
so has part: feature:809567-809639:-1:exon
so has part: feature:805851-805993:-1:exon
so has part: feature:802212-802302:-1:exon
so has part: feature:800855-800996:-1:exon
so has part: feature:800640-800727:-1:exon
so has part: feature:799555-799643:-1:exon
so has part: feature:797519-797649:-1:exon
so has part: feature:791351-791420:-1:exon
so has part: feature:790754-790824:-1:exon
so has part: feature:788767-788939:-1:exon
so has part: feature:783311-783481:-1:exon
so has part: feature:780488-780667:-1:exon
so has part: feature:779401-779997:-1:exon

position:779401:-1
position: 779401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:816461-816544:-1:exon

position:816461:-1
position: 816461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:816309-816366:-1:exon

position:816309:-1
position: 816309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816366:-1
position: 816366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:811170-811306:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:809567-809639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:805851-805993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802212-802302:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800855-800996:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:800640-800727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:799555-799643:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:797519-797649:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:791351-791420:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:790754-790824:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:788767-788939:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:783311-783481:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:780488-780667:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:779401-779997:-1:exon

mtmr10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: mtmr10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 10 isoform X2
translation: MKSSKPSFRSYLPPAESSFPSRAEVSRVCEAALLPGELVVSETSNVRKCIATDTSAHDLYGTLLCTNFKISFITKDVTPFRKFQYRNLLLEEHDISLTCVDQVVAVNDERKKRKVLGPNQCLKFKPTELIIYCKDFRIIRFRFDESIPESARKICLVIAHYSQPKDLQLLFGFAYAGEKCQTSVNGTDPEVDGLQTSLFETYSDWDREIKRTGASEWRVCSVNEHYATSTSLPEYFVVPSSLADEDLKQLVPSFNGDRIPMWCWYHWTGSALVRMANIKPGPKLRKHNTRILKAIAQSHPEKSEVFKSDLDKNLPSISEVQAALVRLKQMCINDFFDETDEKWLSSLENTQWLEYVRLFLKHSAELAQWMYNENISVIIQEEEGRDLSCVIASVIQVMADPHFRTMLGFQSLMQKEWVVAGYRFLDRCNHLGESEKHECPLFLLFLDCVWQLLQQFPAAFEFTETYLTVLYDSVRIPLFGTFLFNTSHQRIQQSQDFATNRKLQCEGKGLELPSVWNWSLQFTAKDLSLFNNPLYIGKSVTCVQNGTIKSFRRVKKNSSSSIYSVYTMKNGKLSDQHDFFPRRNSIQRPSLDLMQLNESHDRNMERYFRDWFSKPVDLHGLIMPHLSSVHIQLWKQCYLRWIPEAQITNGGSISAFHKISLLADEIETLQQRLRQYWSDPCLSGSPEPCGHRMYFRAKDFSETPGELDCFSSSFPFSPVGNLCRRSILGTPLSKFLLTGAKTWPSTETLANED
SIO_010081: mtmr10
subclass of: SO_0000673
so part of: mtmr10
location: complement(join(779401..779997,780488..780667,783311..783481,788767..788939,790754..790824,791351..791420,797519..797649,799555..799643,800640..800727,800855..800996,802212..802302,805851..805993,809567..809639,811170..811306,816309..816366,816461..816508))
location: region:779401-816508:-1
so has part: feature:816461-816508:-1:exon
so has part: feature:816309-816366:-1:exon
so has part: feature:811170-811306:-1:exon
so has part: feature:809567-809639:-1:exon
so has part: feature:805851-805993:-1:exon
so has part: feature:802212-802302:-1:exon
so has part: feature:800855-800996:-1:exon
so has part: feature:800640-800727:-1:exon
so has part: feature:799555-799643:-1:exon
so has part: feature:797519-797649:-1:exon
so has part: feature:791351-791420:-1:exon
so has part: feature:790754-790824:-1:exon
so has part: feature:788767-788939:-1:exon
so has part: feature:783311-783481:-1:exon
so has part: feature:780488-780667:-1:exon
so has part: feature:779401-779997:-1:exon

XP_038640245.1
type: Protein
SIO_000068: ncbiprotein

position:816508:-1
position: 816508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:816461-816508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:816309-816366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:811170-811306:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:809567-809639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:805851-805993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802212-802302:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800855-800996:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:800640-800727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:799555-799643:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:797519-797649:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:791351-791420:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:790754-790824:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:788767-788939:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:783311-783481:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:780488-780667:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:779401-779997:-1:exon

mtmr10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: mtmr10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 10 isoform X1
translation: MMNCVLFLTLLFSSPPLFQLLELVCGPVSPSAAYTHIHCSQHHIGLIRCWCHNSLLTPGSIRRNIGTEGELVVSETSNVRKCIATDTSAHDLYGTLLCTNFKISFITKDVTPFRKFQYRNLLLEEHDISLTCVDQVVAVNDERKKRKVLGPNQCLKFKPTELIIYCKDFRIIRFRFDESIPESARKICLVIAHYSQPKDLQLLFGFAYAGEKCQTSVNGTDPEVDGLQTSLFETYSDWDREIKRTGASEWRVCSVNEHYATSTSLPEYFVVPSSLADEDLKQLVPSFNGDRIPMWCWYHWTGSALVRMANIKPGPKLRKHNTRILKAIAQSHPEKSEVFKSDLDKNLPSISEVQAALVRLKQMCINDFFDETDEKWLSSLENTQWLEYVRLFLKHSAELAQWMYNENISVIIQEEEGRDLSCVIASVIQVMADPHFRTMLGFQSLMQKEWVVAGYRFLDRCNHLGESEKHECPLFLLFLDCVWQLLQQFPAAFEFTETYLTVLYDSVRIPLFGTFLFNTSHQRIQQSQDFATNRKLQCEGKGLELPSVWNWSLQFTAKDLSLFNNPLYIGKSVTCVQNGTIKSFRRVKKNSSSSIYSVYTMKNGKLSDQHDFFPRRNSIQRPSLDLMQLNESHDRNMERYFRDWFSKPVDLHGLIMPHLSSVHIQLWKQCYLRWIPEAQITNGGSISAFHKISLLADEIETLQQRLRQYWSDPCLSGSPEPCGHRMYFRAKDFSETPGELDCFSSSFPFSPVGNLCRRSILGTPLSKFLLTGAKTWPSTETLANED
SIO_010081: mtmr10
subclass of: SO_0000673
so part of: mtmr10
location: complement(join(779401..779997,780488..780667,783311..783481,788767..788939,790754..790824,791351..791420,797519..797649,799555..799643,800640..800727,800855..800996,802212..802302,805851..805993,809567..809639,811170..811306,813468..813672))
location: region:779401-813672:-1
so has part: feature:813468-813672:-1:exon
so has part: feature:811170-811306:-1:exon
so has part: feature:809567-809639:-1:exon
so has part: feature:805851-805993:-1:exon
so has part: feature:802212-802302:-1:exon
so has part: feature:800855-800996:-1:exon
so has part: feature:800640-800727:-1:exon
so has part: feature:799555-799643:-1:exon
so has part: feature:797519-797649:-1:exon
so has part: feature:791351-791420:-1:exon
so has part: feature:790754-790824:-1:exon
so has part: feature:788767-788939:-1:exon
so has part: feature:783311-783481:-1:exon
so has part: feature:780488-780667:-1:exon
so has part: feature:779401-779997:-1:exon

XP_038640243.1
type: Protein
SIO_000068: ncbiprotein

position:813672:-1
position: 813672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813468-813672:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:811170-811306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809567-809639:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:805851-805993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:802212-802302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:800855-800996:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800640-800727:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799555-799643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:797519-797649:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:791351-791420:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:790754-790824:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:788767-788939:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:783311-783481:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:780488-780667:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:779401-779997:-1:exon

trpm1a
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: trpm1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(822375..904694)
location: region:822375-904694:-1
so has part: feature:822375-904694:-1:exon
subclass of: SO_0000010

119956759
type: Gene
SIO_000068: ncbigene

position:822375:-1
position: 822375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904694:-1
position: 904694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822375-904694:-1:exon

trpm1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: trpm1a
product: transient receptor potential cation channel, subfamily M, member 1a, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038784122.1
SIO_010081: trpm1a
subclass of: SO_0000673
so part of: trpm1a
location: complement(join(822375..824546,829640..829772,835797..835987,836377..836521,837636..837656,842327..842519,847481..847732,848282..848410,849138..849269,849832..849951,850473..850701,857032..857330,858382..858411,861197..861337,863528..863578,867961..868095,868187..868336,870702..870802,872261..872333,874383..874506,876847..877021,880214..880385,885012..885136,889009..889222,892343..892535,892653..892732,904360..904694))
location: region:822375-904694:-1
so has part: feature:904360-904694:-1:exon
so has part: feature:892653-892732:-1:exon
so has part: feature:892343-892535:-1:exon
so has part: feature:889009-889222:-1:exon
so has part: feature:885012-885136:-1:exon
so has part: feature:880214-880385:-1:exon
so has part: feature:876847-877021:-1:exon
so has part: feature:874383-874506:-1:exon
so has part: feature:872261-872333:-1:exon
so has part: feature:870702-870802:-1:exon
so has part: feature:868187-868336:-1:exon
so has part: feature:867961-868095:-1:exon
so has part: feature:863528-863578:-1:exon
so has part: feature:861197-861337:-1:exon
so has part: feature:858382-858411:-1:exon
so has part: feature:857032-857330:-1:exon
so has part: feature:850473-850701:-1:exon
so has part: feature:849832-849951:-1:exon
so has part: feature:849138-849269:-1:exon
so has part: feature:848282-848410:-1:exon
so has part: feature:847481-847732:-1:exon
so has part: feature:842327-842519:-1:exon
so has part: feature:837636-837656:-1:exon
so has part: feature:836377-836521:-1:exon
so has part: feature:835797-835987:-1:exon
so has part: feature:829640-829772:-1:exon
so has part: feature:822375-824546:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:904360-904694:-1:exon

position:904360:-1
position: 904360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:892653-892732:-1:exon

position:892653:-1
position: 892653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892732:-1
position: 892732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:892343-892535:-1:exon

position:892343:-1
position: 892343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892535:-1
position: 892535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:889009-889222:-1:exon

position:889009:-1
position: 889009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889222:-1
position: 889222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:885012-885136:-1:exon

position:885012:-1
position: 885012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885136:-1
position: 885136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:880214-880385:-1:exon

position:880214:-1
position: 880214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880385:-1
position: 880385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:876847-877021:-1:exon

position:876847:-1
position: 876847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877021:-1
position: 877021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:874383-874506:-1:exon

position:874383:-1
position: 874383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874506:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:872261-872333:-1:exon

position:872261:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872333:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:870702-870802:-1:exon

position:870702:-1
position: 870702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870802:-1
position: 870802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:868187-868336:-1:exon

position:868187:-1
position: 868187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868336:-1
position: 868336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:867961-868095:-1:exon

position:867961:-1
position: 867961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868095:-1
position: 868095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:863528-863578:-1:exon

position:863528:-1
position: 863528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863578:-1
position: 863578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:861197-861337:-1:exon

position:861197:-1
position: 861197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861337:-1
position: 861337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:858382-858411:-1:exon

position:858382:-1
position: 858382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858411:-1
position: 858411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:857032-857330:-1:exon

position:857032:-1
position: 857032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857330:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:850473-850701:-1:exon

position:850473:-1
position: 850473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850701:-1
position: 850701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:849832-849951:-1:exon

position:849832:-1
position: 849832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849951:-1
position: 849951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:849138-849269:-1:exon

position:849138:-1
position: 849138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849269:-1
position: 849269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:848282-848410:-1:exon

position:848282:-1
position: 848282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848410:-1
position: 848410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:847481-847732:-1:exon

position:847481:-1
position: 847481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847732:-1
position: 847732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:842327-842519:-1:exon

position:842327:-1
position: 842327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842519:-1
position: 842519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:837636-837656:-1:exon

position:837636:-1
position: 837636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837656:-1
position: 837656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:836377-836521:-1:exon

position:836377:-1
position: 836377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836521:-1
position: 836521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:835797-835987:-1:exon

position:835797:-1
position: 835797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835987:-1
position: 835987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:829640-829772:-1:exon

position:829640:-1
position: 829640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829772:-1
position: 829772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:822375-824546:-1:exon

position:824546:-1
position: 824546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

trpm1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: trpm1a
product: transient receptor potential cation channel, subfamily M, member 1a, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038784123.1
SIO_010081: trpm1a
subclass of: SO_0000673
so part of: trpm1a
location: complement(join(822375..824546,829640..829772,835797..835987,836377..836521,837636..837656,842345..842519,847481..847732,848282..848410,849138..849269,849832..849951,850473..850701,857032..857330,858382..858411,861197..861337,863528..863578,867961..868095,868187..868336,870702..870802,872261..872333,874383..874506,876847..877021,880214..880385,885012..885136,889009..889222,892343..892535,892653..892732,904360..904693))
location: region:822375-904693:-1
so has part: feature:904360-904693:-1:exon
so has part: feature:892653-892732:-1:exon
so has part: feature:892343-892535:-1:exon
so has part: feature:889009-889222:-1:exon
so has part: feature:885012-885136:-1:exon
so has part: feature:880214-880385:-1:exon
so has part: feature:876847-877021:-1:exon
so has part: feature:874383-874506:-1:exon
so has part: feature:872261-872333:-1:exon
so has part: feature:870702-870802:-1:exon
so has part: feature:868187-868336:-1:exon
so has part: feature:867961-868095:-1:exon
so has part: feature:863528-863578:-1:exon
so has part: feature:861197-861337:-1:exon
so has part: feature:858382-858411:-1:exon
so has part: feature:857032-857330:-1:exon
so has part: feature:850473-850701:-1:exon
so has part: feature:849832-849951:-1:exon
so has part: feature:849138-849269:-1:exon
so has part: feature:848282-848410:-1:exon
so has part: feature:847481-847732:-1:exon
so has part: feature:842345-842519:-1:exon
so has part: feature:837636-837656:-1:exon
so has part: feature:836377-836521:-1:exon
so has part: feature:835797-835987:-1:exon
so has part: feature:829640-829772:-1:exon
so has part: feature:822375-824546:-1:exon

position:904693:-1
position: 904693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:904360-904693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892653-892732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892343-892535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:889009-889222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885012-885136:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:880214-880385:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876847-877021:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:874383-874506:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:872261-872333:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:870702-870802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:868187-868336:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:867961-868095:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:863528-863578:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:861197-861337:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:858382-858411:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:857032-857330:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:850473-850701:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:849832-849951:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:849138-849269:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:848282-848410:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:847481-847732:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:842345-842519:-1:exon

position:842345:-1
position: 842345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:837636-837656:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:836377-836521:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:835797-835987:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:829640-829772:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:822375-824546:-1:exon

trpm1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: trpm1a
product: transient receptor potential cation channel, subfamily M, member 1a, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038784125.1
SIO_010081: trpm1a
subclass of: SO_0000673
so part of: trpm1a
location: complement(join(822375..824546,829640..829772,835797..835987,836377..836521,837636..837656,842327..842519,847481..847732,848282..848410,849138..849269,849832..849951,850473..850701,857032..857330,858382..858411,861197..861337,863528..863578,867961..868095,868187..868336,870702..870802,872261..872333,874383..874506,876847..877021,880214..880385,885012..885136,889009..889222,892343..892535,892653..892732,895145..895269))
location: region:822375-895269:-1
so has part: feature:895145-895269:-1:exon
so has part: feature:892653-892732:-1:exon
so has part: feature:892343-892535:-1:exon
so has part: feature:889009-889222:-1:exon
so has part: feature:885012-885136:-1:exon
so has part: feature:880214-880385:-1:exon
so has part: feature:876847-877021:-1:exon
so has part: feature:874383-874506:-1:exon
so has part: feature:872261-872333:-1:exon
so has part: feature:870702-870802:-1:exon
so has part: feature:868187-868336:-1:exon
so has part: feature:867961-868095:-1:exon
so has part: feature:863528-863578:-1:exon
so has part: feature:861197-861337:-1:exon
so has part: feature:858382-858411:-1:exon
so has part: feature:857032-857330:-1:exon
so has part: feature:850473-850701:-1:exon
so has part: feature:849832-849951:-1:exon
so has part: feature:849138-849269:-1:exon
so has part: feature:848282-848410:-1:exon
so has part: feature:847481-847732:-1:exon
so has part: feature:842327-842519:-1:exon
so has part: feature:837636-837656:-1:exon
so has part: feature:836377-836521:-1:exon
so has part: feature:835797-835987:-1:exon
so has part: feature:829640-829772:-1:exon
so has part: feature:822375-824546:-1:exon

position:895269:-1
position: 895269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:895145-895269:-1:exon

position:895145:-1
position: 895145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:892653-892732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892343-892535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:889009-889222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885012-885136:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:880214-880385:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876847-877021:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:874383-874506:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:872261-872333:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:870702-870802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:868187-868336:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:867961-868095:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:863528-863578:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:861197-861337:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:858382-858411:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:857032-857330:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:850473-850701:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:849832-849951:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:849138-849269:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:848282-848410:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:847481-847732:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:842327-842519:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:837636-837656:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:836377-836521:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:835797-835987:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:829640-829772:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:822375-824546:-1:exon

trpm1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: trpm1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transient receptor potential cation channel subfamily M member 1a isoform X2
translation: MLTNSLKKMSGSFKRTSIKRTVSGSQKGHKAWIEKNFQKRDCVCIILNPKDPQRCCCGQLVGQHVANTPTAPSSEAGEEEKHVAQSEKWTPSKHTQASPTDAFGAMEFQGGGHASKAMYIRVSYDTKPDLLLQLMTSEWELELPKLLISVHGGLQNFELQPKLKQVFGKGLIKATMTTGAWIFTAGVNTGVIRHVGDALKDHSSKSCGKICAIGFAPWGIVENRMDLIGKDLTKPYQTMSTPLSKLTVLSNTHSHFILADNGSLGKYGAEVRLRRQLEKHISLQQINTRLGQGVPVVCLIVEGGPNVISIVLESLREDPPVPVVVCDGSGRASDILAFAHKYSAEGGIISESVRDQLMVTVQKTFNYSRQQAQQLFVSIMECMKKKALITVFRMGSEGQQDIDLAILTALLKGTNASAPDQLSLAMAWNRVDIARNQIFVFGNHWPPMGSSSECTTQGSKKSVKQRMTKSKGKGKRRGKDEVKEETDPRKLELLNWVNSLEQAMIDALVLDRVDFVKLLIENGVNIHNFLTIPRLEELYNTRLGPPNTLHYLVRDVKKGNLPPDYHISLIDIGLVMEYLMGGAYRCTYTRKTFRTLYNNLFGPKRPKALKLLGMEDDDPPSKSKRKKKKKKKKEEEIDIDEDDPAIGRFTFPFHELLVWAVLMKRQRMALFFWQHGEEALAKALVACKLYKAMSNECSGSELVDDISQDLDNNSKDFGQLAVDLLDQSYKHDEQVAMKLLTYELKNWSDSTCLKLAVTAKHRDFIAHTCSQMLLTDMWMGRLHMCKNPGLKIVLGIIFPPAILFMDFKGSDDLSYEASGDNEQGKEKEEDNDANNEAVSRKGDEEDGMENHRSIPIGRKIYEFYNAPIVKFWFHTMAYLAYLFLYNYVILVKMEGLPSMAEWVLISYILMLAVEKIREILMSEPSKLRQKVKVWMQEYWNVTDMVAIAIFSCGVLLRLQNQPYMSYGRVIYCVDIIIWYIRVLDIFGVNKYLGPYVMMIGKMMVDMLYFVVIMLVILMSFGVSRQAILHPDEEPSWRLARNIFYMPYWMIYGEVFADQLDLYAMEINPPCGDNLFDDDGKRLPPCIPGAWIIPAIMACYLLVANVLLVNLLIAVFNNTFLEVISISNQVWKFQRYQLILTFHERPVFPPPLIVFSYLSMVAHHCCRRKGKEVEERDRGLKLILSEEELKKLQVFEEQCVEQYFTQKEDQEQSSNDERIRITADRVENMAMRLEEVNEREHFMKASLQTVDIRLAQLEEFSGRMVNAMEKLAGIDKAELTHTRSRCPSECDASYLIRQNSTEATSMYRFHMDGDDTNFEDSSGLMSPLMGSHRKTYSAIALRDEKELAEQKINMTPKRRFGLHQSSSSCRMKENSLRLGVTQDTRNFNSCVDIFVSSDGCSSPLNTKEETNYQRFLHTVEAGLNGQLVKEAGLVTRTTLKACLSFPLEKSKAANYLPSQSHGACQATVVKARSVIFGLEGMVSRPEQSWSPDCGYNIDHVHSGGSSSTKTPEWVTQCEHKFYKNLPEERGMVEDAPHPTLPSSPETLAEQKQELTDTEDDIGTGRYVLDLPPPRVEVPRTVPKSKNFLTVTPDRLISSRSKSLHGRSRKTMLMMEENVNKPKQAFSTKDLRQTCGDPRQMSRDPQQVYRDPRRTGSSRAAGPKKKSTETFC
SIO_010081: trpm1a
subclass of: SO_0000673
so part of: trpm1a
location: complement(join(823205..824546,829640..829772,835797..835987,836377..836521,837636..837656,842345..842519,847481..847732,848282..848410,849138..849269,849832..849951,850473..850701,857032..857330,858382..858411,861197..861337,863528..863578,867961..868095,868187..868336,870702..870802,872261..872333,874383..874506,876847..877021,880214..880385,885012..885136,889009..889222,892343..892535,892653..892732,904360..904440))
location: region:823205-904440:-1
so has part: feature:904360-904440:-1:exon
so has part: feature:892653-892732:-1:exon
so has part: feature:892343-892535:-1:exon
so has part: feature:889009-889222:-1:exon
so has part: feature:885012-885136:-1:exon
so has part: feature:880214-880385:-1:exon
so has part: feature:876847-877021:-1:exon
so has part: feature:874383-874506:-1:exon
so has part: feature:872261-872333:-1:exon
so has part: feature:870702-870802:-1:exon
so has part: feature:868187-868336:-1:exon
so has part: feature:867961-868095:-1:exon
so has part: feature:863528-863578:-1:exon
so has part: feature:861197-861337:-1:exon
so has part: feature:858382-858411:-1:exon
so has part: feature:857032-857330:-1:exon
so has part: feature:850473-850701:-1:exon
so has part: feature:849832-849951:-1:exon
so has part: feature:849138-849269:-1:exon
so has part: feature:848282-848410:-1:exon
so has part: feature:847481-847732:-1:exon
so has part: feature:842345-842519:-1:exon
so has part: feature:837636-837656:-1:exon
so has part: feature:836377-836521:-1:exon
so has part: feature:835797-835987:-1:exon
so has part: feature:829640-829772:-1:exon
so has part: feature:823205-824546:-1:exon

XP_038640051.1
type: Protein
SIO_000068: ncbiprotein

position:823205:-1
position: 823205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904440:-1
position: 904440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:904360-904440:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892653-892732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892343-892535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:889009-889222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885012-885136:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:880214-880385:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876847-877021:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:874383-874506:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:872261-872333:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:870702-870802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:868187-868336:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:867961-868095:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:863528-863578:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:861197-861337:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:858382-858411:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:857032-857330:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:850473-850701:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:849832-849951:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:849138-849269:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:848282-848410:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:847481-847732:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:842345-842519:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:837636-837656:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:836377-836521:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:835797-835987:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:829640-829772:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:823205-824546:-1:exon

trpm1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: trpm1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transient receptor potential cation channel subfamily M member 1a isoform X1
translation: MLTNSLKKMSGSFKRTSIKRTVSGSQKGHKAWIEKNFQKRDCVCIILNPKDPQRCCCGQLVGQHVANTPTAPSSEAGEEEKHVAQSEKWTPSKHTQASPTDAFGAMEFQGGGHASKAMYIRVSYDTKPDLLLQLMTSEWELELPKLLISVHGGLQNFELQPKLKQVFGKGLIKATMTTGAWIFTAGVNTGVIRHVGDALKDHSSKSCGKICAIGFAPWGIVENRMDLIGKDLTKPYQTMSTPLSKLTVLSNTHSHFILADNGSLGKYGAEVRLRRQLEKHISLQQINTRLGQGVPVVCLIVEGGPNVISIVLESLREDPPVPVVVCDGSGRASDILAFAHKYSAEGGIISESVRDQLMVTVQKTFNYSRQQAQQLFVSIMECMKKKALITVFRMGSEGQQDIDLAILTALLKGTNASAPDQLSLAMAWNRVDIARNQIFVFGNHWPPMGSSSECTTQGSKKSVKQRMTKSKGKGKRRGKDEVKEETDPRKLELLNWVNSLEQAMIDALVLDRVDFVKLLIENGVNIHNFLTIPRLEELYNTRLGPPNTLHYLVRDVKKGNLPPDYHISLIDIGLVMEYLMGGAYRCTYTRKTFRTLYNNLFGPKRPKALKLLGMEDDDPPSKSKRKKKKKKKKEEEIDIDEDDPAIGRFTFPFHELLVWAVLMKRQRMALFFWQHGEEALAKALVACKLYKAMSNECSGSELVDDISQDLDNNSKDFGQLAVDLLDQSYKHDEQVAMKLLTYELKNWSDSTCLKLAVTAKHRDFIAHTCSQMLLTDMWMGRLHMCKNPGLKIVLGIIFPPAILFMDFKGSDDLSYEASGDNEQGKEKEEDNDANNEAVSRKGDEEDGMENHRSIPIGRKIYEFYNAPIVKFWFHTMAYLAYLFLYNYVILVKMEGLPSMAEWVLISYILMLAVEKIREILMSEPSKLRQKVKVWMQEYWNVTDMVAIAIFSCGVLLRLQNQPYMSYGRVIYCVDIIIWYIRVLDIFGVNKYLGPYVMMIGKMMVDMLYFVVIMLVILMSFGVSRQAILHPDEEPSWRLARNIFYMPYWMIYGEVFADQLDRKTRIYIYAMEINPPCGDNLFDDDGKRLPPCIPGAWIIPAIMACYLLVANVLLVNLLIAVFNNTFLEVISISNQVWKFQRYQLILTFHERPVFPPPLIVFSYLSMVAHHCCRRKGKEVEERDRGLKLILSEEELKKLQVFEEQCVEQYFTQKEDQEQSSNDERIRITADRVENMAMRLEEVNEREHFMKASLQTVDIRLAQLEEFSGRMVNAMEKLAGIDKAELTHTRSRCPSECDASYLIRQNSTEATSMYRFHMDGDDTNFEDSSGLMSPLMGSHRKTYSAIALRDEKELAEQKINMTPKRRFGLHQSSSSCRMKENSLRLGVTQDTRNFNSCVDIFVSSDGCSSPLNTKEETNYQRFLHTVEAGLNGQLVKEAGLVTRTTLKACLSFPLEKSKAANYLPSQSHGACQATVVKARSVIFGLEGMVSRPEQSWSPDCGYNIDHVHSGGSSSTKTPEWVTQCEHKFYKNLPEERGMVEDAPHPTLPSSPETLAEQKQELTDTEDDIGTGRYVLDLPPPRVEVPRTVPKSKNFLTVTPDRLISSRSKSLHGRSRKTMLMMEENVNKPKQAFSTKDLRQTCGDPRQMSRDPQQVYRDPRRTGSSRAAGPKKKSTETFC
SIO_010081: trpm1a
subclass of: SO_0000673
so part of: trpm1a
location: complement(join(823205..824546,829640..829772,835797..835987,836377..836521,837636..837656,842327..842519,847481..847732,848282..848410,849138..849269,849832..849951,850473..850701,857032..857330,858382..858411,861197..861337,863528..863578,867961..868095,868187..868336,870702..870802,872261..872333,874383..874506,876847..877021,880214..880385,885012..885136,889009..889222,892343..892535,892653..892732,904360..904440))
location: region:823205-904440:-1
so has part: feature:904360-904440:-1:exon
so has part: feature:892653-892732:-1:exon
so has part: feature:892343-892535:-1:exon
so has part: feature:889009-889222:-1:exon
so has part: feature:885012-885136:-1:exon
so has part: feature:880214-880385:-1:exon
so has part: feature:876847-877021:-1:exon
so has part: feature:874383-874506:-1:exon
so has part: feature:872261-872333:-1:exon
so has part: feature:870702-870802:-1:exon
so has part: feature:868187-868336:-1:exon
so has part: feature:867961-868095:-1:exon
so has part: feature:863528-863578:-1:exon
so has part: feature:861197-861337:-1:exon
so has part: feature:858382-858411:-1:exon
so has part: feature:857032-857330:-1:exon
so has part: feature:850473-850701:-1:exon
so has part: feature:849832-849951:-1:exon
so has part: feature:849138-849269:-1:exon
so has part: feature:848282-848410:-1:exon
so has part: feature:847481-847732:-1:exon
so has part: feature:842327-842519:-1:exon
so has part: feature:837636-837656:-1:exon
so has part: feature:836377-836521:-1:exon
so has part: feature:835797-835987:-1:exon
so has part: feature:829640-829772:-1:exon
so has part: feature:823205-824546:-1:exon

XP_038640050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:904360-904440:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892653-892732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892343-892535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:889009-889222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885012-885136:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:880214-880385:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876847-877021:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:874383-874506:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:872261-872333:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:870702-870802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:868187-868336:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:867961-868095:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:863528-863578:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:861197-861337:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:858382-858411:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:857032-857330:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:850473-850701:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:849832-849951:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:849138-849269:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:848282-848410:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:847481-847732:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:842327-842519:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:837636-837656:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:836377-836521:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:835797-835987:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:829640-829772:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:823205-824546:-1:exon

trpm1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: trpm1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transient receptor potential cation channel subfamily M member 1a isoform X3
translation: MEFQGGGHASKAMYIRVSYDTKPDLLLQLMTSEWELELPKLLISVHGGLQNFELQPKLKQVFGKGLIKATMTTGAWIFTAGVNTGVIRHVGDALKDHSSKSCGKICAIGFAPWGIVENRMDLIGKDLTKPYQTMSTPLSKLTVLSNTHSHFILADNGSLGKYGAEVRLRRQLEKHISLQQINTRLGQGVPVVCLIVEGGPNVISIVLESLREDPPVPVVVCDGSGRASDILAFAHKYSAEGGIISESVRDQLMVTVQKTFNYSRQQAQQLFVSIMECMKKKALITVFRMGSEGQQDIDLAILTALLKGTNASAPDQLSLAMAWNRVDIARNQIFVFGNHWPPMGSSSECTTQGSKKSVKQRMTKSKGKGKRRGKDEVKEETDPRKLELLNWVNSLEQAMIDALVLDRVDFVKLLIENGVNIHNFLTIPRLEELYNTRLGPPNTLHYLVRDVKKGNLPPDYHISLIDIGLVMEYLMGGAYRCTYTRKTFRTLYNNLFGPKRPKALKLLGMEDDDPPSKSKRKKKKKKKKEEEIDIDEDDPAIGRFTFPFHELLVWAVLMKRQRMALFFWQHGEEALAKALVACKLYKAMSNECSGSELVDDISQDLDNNSKDFGQLAVDLLDQSYKHDEQVAMKLLTYELKNWSDSTCLKLAVTAKHRDFIAHTCSQMLLTDMWMGRLHMCKNPGLKIVLGIIFPPAILFMDFKGSDDLSYEASGDNEQGKEKEEDNDANNEAVSRKGDEEDGMENHRSIPIGRKIYEFYNAPIVKFWFHTMAYLAYLFLYNYVILVKMEGLPSMAEWVLISYILMLAVEKIREILMSEPSKLRQKVKVWMQEYWNVTDMVAIAIFSCGVLLRLQNQPYMSYGRVIYCVDIIIWYIRVLDIFGVNKYLGPYVMMIGKMMVDMLYFVVIMLVILMSFGVSRQAILHPDEEPSWRLARNIFYMPYWMIYGEVFADQLDRKTRIYIYAMEINPPCGDNLFDDDGKRLPPCIPGAWIIPAIMACYLLVANVLLVNLLIAVFNNTFLEVISISNQVWKFQRYQLILTFHERPVFPPPLIVFSYLSMVAHHCCRRKGKEVEERDRGLKLILSEEELKKLQVFEEQCVEQYFTQKEDQEQSSNDERIRITADRVENMAMRLEEVNEREHFMKASLQTVDIRLAQLEEFSGRMVNAMEKLAGIDKAELTHTRSRCPSECDASYLIRQNSTEATSMYRFHMDGDDTNFEDSSGLMSPLMGSHRKTYSAIALRDEKELAEQKINMTPKRRFGLHQSSSSCRMKENSLRLGVTQDTRNFNSCVDIFVSSDGCSSPLNTKEETNYQRFLHTVEAGLNGQLVKEAGLVTRTTLKACLSFPLEKSKAANYLPSQSHGACQATVVKARSVIFGLEGMVSRPEQSWSPDCGYNIDHVHSGGSSSTKTPEWVTQCEHKFYKNLPEERGMVEDAPHPTLPSSPETLAEQKQELTDTEDDIGTGRYVLDLPPPRVEVPRTVPKSKNFLTVTPDRLISSRSKSLHGRSRKTMLMMEENVNKPKQAFSTKDLRQTCGDPRQMSRDPQQVYRDPRRTGSSRAAGPKKKSTETFC
SIO_010081: trpm1a
subclass of: SO_0000673
so part of: trpm1a
location: complement(join(823205..824546,829640..829772,835797..835987,836377..836521,837636..837656,842327..842519,847481..847732,848282..848410,849138..849269,849832..849951,850473..850701,857032..857330,858382..858411,861197..861337,863528..863578,867961..868095,868187..868336,870702..870802,872261..872333,874383..874506,876847..877021,880214..880385,885012..885136,889009..889222,892343..892381))
location: region:823205-892381:-1
so has part: feature:892343-892381:-1:exon
so has part: feature:889009-889222:-1:exon
so has part: feature:885012-885136:-1:exon
so has part: feature:880214-880385:-1:exon
so has part: feature:876847-877021:-1:exon
so has part: feature:874383-874506:-1:exon
so has part: feature:872261-872333:-1:exon
so has part: feature:870702-870802:-1:exon
so has part: feature:868187-868336:-1:exon
so has part: feature:867961-868095:-1:exon
so has part: feature:863528-863578:-1:exon
so has part: feature:861197-861337:-1:exon
so has part: feature:858382-858411:-1:exon
so has part: feature:857032-857330:-1:exon
so has part: feature:850473-850701:-1:exon
so has part: feature:849832-849951:-1:exon
so has part: feature:849138-849269:-1:exon
so has part: feature:848282-848410:-1:exon
so has part: feature:847481-847732:-1:exon
so has part: feature:842327-842519:-1:exon
so has part: feature:837636-837656:-1:exon
so has part: feature:836377-836521:-1:exon
so has part: feature:835797-835987:-1:exon
so has part: feature:829640-829772:-1:exon
so has part: feature:823205-824546:-1:exon

XP_038640053.1
type: Protein
SIO_000068: ncbiprotein

position:892381:-1
position: 892381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892343-892381:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:889009-889222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:885012-885136:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:880214-880385:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876847-877021:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:874383-874506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:872261-872333:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:870702-870802:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:868187-868336:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:867961-868095:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:863528-863578:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:861197-861337:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:858382-858411:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:857032-857330:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:850473-850701:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:849832-849951:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:849138-849269:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:848282-848410:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:847481-847732:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:842327-842519:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:837636-837656:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:836377-836521:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:835797-835987:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:829640-829772:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:823205-824546:-1:exon

LOC119956789
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(962619..1104257)
location: region:962619-1104257:-1
so has part: feature:962619-1104257:-1:exon
subclass of: SO_0000010

119956789
type: Gene
SIO_000068: ncbigene

position:962619:-1
position: 962619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104257:-1
position: 1104257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:962619-1104257:-1:exon

LOC119956789
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956789
product: OTU domain-containing protein 7A-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038784209.1
SIO_010081: LOC119956789
subclass of: SO_0000673
so part of: LOC119956789
location: complement(join(962619..966446,978119..978203,978547..978661,981432..981581,983490..983617,1008830..1008941,1014323..1014451,1016284..1016385,1022821..1023042,1034379..1034547,1049102..1049256,1052349..1052523,1064257..1064325,1104048..1104257))
location: region:962619-1104257:-1
so has part: feature:1104048-1104257:-1:exon
so has part: feature:1064257-1064325:-1:exon
so has part: feature:1052349-1052523:-1:exon
so has part: feature:1049102-1049256:-1:exon
so has part: feature:1034379-1034547:-1:exon
so has part: feature:1022821-1023042:-1:exon
so has part: feature:1016284-1016385:-1:exon
so has part: feature:1014323-1014451:-1:exon
so has part: feature:1008830-1008941:-1:exon
so has part: feature:983490-983617:-1:exon
so has part: feature:981432-981581:-1:exon
so has part: feature:978547-978661:-1:exon
so has part: feature:978119-978203:-1:exon
so has part: feature:962619-966446:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1104048-1104257:-1:exon

position:1104048:-1
position: 1104048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1064257-1064325:-1:exon

position:1064257:-1
position: 1064257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064325:-1
position: 1064325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1052349-1052523:-1:exon

position:1052349:-1
position: 1052349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052523:-1
position: 1052523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1049102-1049256:-1:exon

position:1049102:-1
position: 1049102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049256:-1
position: 1049256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1034379-1034547:-1:exon

position:1034379:-1
position: 1034379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034547:-1
position: 1034547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1022821-1023042:-1:exon

position:1022821:-1
position: 1022821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023042:-1
position: 1023042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1016284-1016385:-1:exon

position:1016284:-1
position: 1016284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016385:-1
position: 1016385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1014323-1014451:-1:exon

position:1014323:-1
position: 1014323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014451:-1
position: 1014451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1008830-1008941:-1:exon

position:1008830:-1
position: 1008830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008941:-1
position: 1008941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:983490-983617:-1:exon

position:983490:-1
position: 983490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983617:-1
position: 983617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:981432-981581:-1:exon

position:981432:-1
position: 981432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981581:-1
position: 981581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:978547-978661:-1:exon

position:978547:-1
position: 978547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978661:-1
position: 978661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:978119-978203:-1:exon

position:978119:-1
position: 978119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978203:-1
position: 978203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:962619-966446:-1:exon

position:966446:-1
position: 966446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119956789
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956789
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: OTU domain-containing protein 7A-like
translation: MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLSAALNDFEQLRQIHTGNLPHVFNEGSFYKQQEKELCNQINQSAQRQXEIAQEKRLSRGISHASSAIVSLARSHVANECSGEQFPLEMPIYTFQLHDLNVYSEDFRSFSERDLIEQSTMLALEQAGRLNWWSVVCSSCKRLLPLATTGDGNCLLHAASLGMWGFHDRDLMLRKALYTMMKNGTERDALRRRWRWQQTQQNKEAGLVYTEEEWEREWNELLKLASSEPRTHYSKNTGTSGGVDNTEDPVYESLEEFHVFVLAHVLRRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPPNRCHCSPLVLAYDQAHFSALVSMEQNDQQREQAAIPLTDSEHKLLPLHFAMDPKKDWEWGKDDNDNTKLANLILSLEAKLHLLHSYMNVSWICIPAETRAPLAQPESPTASVGEDVHSLSDSESDRDSICSNSNLNGNKIQKEKDKRDKQKKDKERNRTDSVANKLGSLSKTLGIKIKKNMGGLGGLVHGKISKGNSSNGRNGENAEKVKKKESNKSSKGSREESSQSASSSPTDKSNISVKTSVEKQTDQWKYSTDVRLSLNILRAAMQGERKFIFAGLLLTSHRHQFHEEMINYYLTTAQERFNAERVQKRKEADKKASSNSTCKKVEQEPSQRSKIEPNSQEDRLQGSFQSHTGQLSSKIQERRDQTQETNSPHNSEIPKTGTLTSAHFTHTPALLRPVHVSEVKSQSLSCQVNNQPPVISSLKTCATYPQHNRSLSYQSYCPVGLSGFPTVETVEPLKCLLPPEHKSHTYTNGFGTGDVHDSLEYADDDVSSVWQSAEKAKGRGVAAASNSLQQNRCKQHNCPFYGRLETESYCSYCYKEELKRRERGNKSI
SIO_010081: LOC119956789
subclass of: SO_0000673
so part of: LOC119956789
location: complement(join(965073..966446,978119..978203,978547..978661,981432..981581,983490..983617,1008830..1008941,1014323..1014451,1016284..1016385,1022821..1023042,1034379..1034547,1049102..1049186))
location: region:965073-1049186:-1
so has part: feature:1049102-1049186:-1:exon
so has part: feature:1034379-1034547:-1:exon
so has part: feature:1022821-1023042:-1:exon
so has part: feature:1016284-1016385:-1:exon
so has part: feature:1014323-1014451:-1:exon
so has part: feature:1008830-1008941:-1:exon
so has part: feature:983490-983617:-1:exon
so has part: feature:981432-981581:-1:exon
so has part: feature:978547-978661:-1:exon
so has part: feature:978119-978203:-1:exon
so has part: feature:965073-966446:-1:exon

XP_038640137.1
type: Protein
SIO_000068: ncbiprotein

position:965073:-1
position: 965073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049186:-1
position: 1049186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1049102-1049186:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1034379-1034547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1022821-1023042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1016284-1016385:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014323-1014451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1008830-1008941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:983490-983617:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:981432-981581:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:978547-978661:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:978119-978203:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:965073-966446:-1:exon

LOC119956941
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1133703..1138025
location: region:1133703-1138025:1
so has part: feature:1133703-1138025:1:exon
subclass of: SO_0000010

119956941
type: Gene
SIO_000068: ncbigene

position:1133703:1
position: 1133703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138025:1
position: 1138025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133703-1138025:1:exon

LOC119956941
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956941
product: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038784531.1
SIO_010081: LOC119956941
subclass of: SO_0000673
so part of: LOC119956941
location: join(1133703..1134567,1136858..1138025)
location: region:1133703-1138025:1
so has part: feature:1133703-1134567:1:exon
so has part: feature:1136858-1138025:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1133703-1134567:1:exon

position:1134567:1
position: 1134567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1136858-1138025:1:exon

position:1136858:1
position: 1136858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119956941
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like
translation: MRKLGKYRLKSALAAVTALAAFVLLFSGDFDSCEEDMMMGIWEDPEDVSDRKCMDKFYRDLNLFTQPAMCSRIIRGDQEAVQEARLNSLDVSSKKGPLTENHYINATKHCAAFIRKRKYLTFPRSLEERNFPIAYSIVIHENIEMFERLLRTIYTPQNLYCIHVDRKAAVTFHHAVKAIASCFPNVFIASKLENVVYASWSRVQADLNCMEELLQSPVQWKYFINLCGLDFPIKTNAEMVRTLIVLNGKNSMESEEPSAFKTERWLFHHEVKNQISRTKEKKSLPPISTPMFTGNAYFVASREFVNHLFVSPEVQKFLKWAEDTYSPDEHVWATLQRMPTVPGTNPPNSKYHMSDMAAIARLVKWSYMEGDITKNAPYPKCAGIHRRSVCIYGSGDLHWILQQHHLFANKFDSQVDDTALQCLEGHLRYKAIYRKGFM
SIO_010081: LOC119956941
subclass of: SO_0000673
so part of: LOC119956941
location: join(1133782..1134567,1136858..1137388)
location: region:1133782-1137388:1
so has part: feature:1133782-1134567:1:exon
so has part: feature:1136858-1137388:1:exon

XP_038640459.1
type: Protein
SIO_000068: ncbiprotein

position:1133782:1
position: 1133782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137388:1
position: 1137388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133782-1134567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1136858-1137388:1:exon

LOC119956957
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956957
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1156145..1156361)
location: region:1156145-1156361:-1
so has part: feature:1156145-1156361:-1:exon
subclass of: SO_0000578

119956957
type: Gene
SIO_000068: ncbigene

position:1156145:-1
position: 1156145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156361:-1
position: 1156361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156145-1156361:-1:exon

LOC119956957
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7830
nc RNA class: snoRNA
gene: LOC119956957
product: small nucleolar RNA U3
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00012
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005458719.1
SIO_010081: LOC119956957
subclass of: SO_0000673
so part of: LOC119956957
location: complement(1156145..1156361)
location: region:1156145-1156361:-1
so has part: feature:1156145-1156361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1156145-1156361:-1:exon

LOC119956956
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956956
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1158355..1158571
location: region:1158355-1158571:1
so has part: feature:1158355-1158571:1:exon
subclass of: SO_0000578

119956956
type: Gene
SIO_000068: ncbigene

position:1158355:1
position: 1158355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1158571:1
position: 1158571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1158355-1158571:1:exon

LOC119956956
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7830
nc RNA class: snoRNA
gene: LOC119956956
product: small nucleolar RNA U3
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00012
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005458718.1
SIO_010081: LOC119956956
subclass of: SO_0000673
so part of: LOC119956956
location: 1158355..1158571
location: region:1158355-1158571:1
so has part: feature:1158355-1158571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1158355-1158571:1:exon

LOC119956955
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956955
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1160929..1161145
location: region:1160929-1161145:1
so has part: feature:1160929-1161145:1:exon
subclass of: SO_0000578

119956955
type: Gene
SIO_000068: ncbigene

position:1160929:1
position: 1160929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161145:1
position: 1161145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1160929-1161145:1:exon

LOC119956955
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7830
nc RNA class: snoRNA
gene: LOC119956955
product: small nucleolar RNA U3
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00012
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005458717.1
SIO_010081: LOC119956955
subclass of: SO_0000673
so part of: LOC119956955
location: 1160929..1161145
location: region:1160929-1161145:1
so has part: feature:1160929-1161145:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1160929-1161145:1:exon

adpgk
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: adpgk
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1170506..1203253
location: region:1170506-1203253:1
so has part: feature:1170506-1203253:1:exon
subclass of: SO_0000010

119956773
type: Gene
SIO_000068: ncbigene

position:1170506:1
position: 1170506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1203253:1
position: 1203253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1170506-1203253:1:exon

adpgk
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: adpgk
product: ADP-dependent glucokinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_038784168.1
SIO_010081: adpgk
subclass of: SO_0000673
so part of: adpgk
location: join(1170506..1170801,1172315..1172540,1180863..1180925,1186975..1187095,1188896..1189092,1197839..1197937,1199204..1203253)
location: region:1170506-1203253:1
so has part: feature:1170506-1170801:1:exon
so has part: feature:1172315-1172540:1:exon
so has part: feature:1180863-1180925:1:exon
so has part: feature:1186975-1187095:1:exon
so has part: feature:1188896-1189092:1:exon
so has part: feature:1197839-1197937:1:exon
so has part: feature:1199204-1203253:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1170506-1170801:1:exon

position:1170801:1
position: 1170801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1172315-1172540:1:exon

position:1172315:1
position: 1172315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1172540:1
position: 1172540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1180863-1180925:1:exon

position:1180863:1
position: 1180863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180925:1
position: 1180925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1186975-1187095:1:exon

position:1186975:1
position: 1186975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187095:1
position: 1187095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1188896-1189092:1:exon

position:1188896:1
position: 1188896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189092:1
position: 1189092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1197839-1197937:1:exon

position:1197839:1
position: 1197839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197937:1
position: 1197937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1199204-1203253:1:exon

position:1199204:1
position: 1199204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

adpgk
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: adpgk
product: ADP-dependent glucokinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_038784169.1
SIO_010081: adpgk
subclass of: SO_0000673
so part of: adpgk
location: join(1170506..1170801,1172315..1172540,1180863..1180925,1186975..1187095,1188896..1189092,1197839..1197937,1199207..1203253)
location: region:1170506-1203253:1
so has part: feature:1170506-1170801:1:exon
so has part: feature:1172315-1172540:1:exon
so has part: feature:1180863-1180925:1:exon
so has part: feature:1186975-1187095:1:exon
so has part: feature:1188896-1189092:1:exon
so has part: feature:1197839-1197937:1:exon
so has part: feature:1199207-1203253:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1170506-1170801:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1172315-1172540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1180863-1180925:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1186975-1187095:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188896-1189092:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1197839-1197937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1199207-1203253:1:exon

position:1199207:1
position: 1199207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

adpgk
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: adpgk
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-dependent glucokinase isoform X1
translation: MWRATAVVALVALVLHMLISHYPAEGPAEALRFIFDYLSVRRAPEEVVAQAWDSLIRAPSSGWSRVAVGVNACVDVVVCGIGLMKALGLEHGSNVDHDILQSGEELVETLSYFMQKGVAAERFFADKELFQKIAETASKFPGAQHFVGGNAALIGQKLSTNPSLSVLLCGPVGPKLHELLDDKIIVPPESLQKVDEFHLILEYQAGDVLGEIKAPQANRFIFSHDVSNGEMNKMEAFIASLEEFQPELLVLSGLHMMEGQGKEERNRRLQEVSVLISEIPNEISVHLELASMTDTTYMNTIVEQQVLTIVNSIGLNEQELLFISQAGSGPHSSQQHWDGTPDIGMVSDIIFWLLKEYGRTDMHMDSDLTRVHFHTLTYHILATVDGYWGNQISSVAAGARAAGSQACGTDTIDPTKVILDSPAEFVLSQTDTLLKNKKMTLSPTNPVRVWQRENISFYITPVLICVNPIRTVGLGDTISAEGLLYSERK
SIO_010081: adpgk
subclass of: SO_0000673
so part of: adpgk
location: join(1170596..1170801,1172315..1172540,1180863..1180925,1186975..1187095,1188896..1189092,1197839..1197937,1199204..1199761)
location: region:1170596-1199761:1
so has part: feature:1170596-1170801:1:exon
so has part: feature:1172315-1172540:1:exon
so has part: feature:1180863-1180925:1:exon
so has part: feature:1186975-1187095:1:exon
so has part: feature:1188896-1189092:1:exon
so has part: feature:1197839-1197937:1:exon
so has part: feature:1199204-1199761:1:exon

XP_038640096.1
type: Protein
SIO_000068: ncbiprotein

position:1170596:1
position: 1170596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199761:1
position: 1199761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1170596-1170801:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1172315-1172540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1180863-1180925:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1186975-1187095:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188896-1189092:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1197839-1197937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1199204-1199761:1:exon

adpgk
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: adpgk
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-dependent glucokinase isoform X2
translation: MWRATAVVALVALVLHMLISHYPAEGPAEALRFIFDYLSVRRAPEEVVAQAWDSLIRAPSSGWSRVAVGVNACVDVVVCGIGLMKALGLEHGSNVDHDILQSGEELVETLSYFMQKGVAAERFFADKELFQKIAETASKFPGAQHFVGGNAALIGQKLSTNPSLSVLLCGPVGPKLHELLDDKIIVPPESLQKVDEFHLILEYQAGDVLGEIKAPQANRFIFSHDVSNGEMNKMEAFIASLEEFQPELLVLSGLHMMEGQGKEERNRRLQEVSVLISEIPNEISVHLELASMTDTTYMNTIVEQVLTIVNSIGLNEQELLFISQAGSGPHSSQQHWDGTPDIGMVSDIIFWLLKEYGRTDMHMDSDLTRVHFHTLTYHILATVDGYWGNQISSVAAGARAAGSQACGTDTIDPTKVILDSPAEFVLSQTDTLLKNKKMTLSPTNPVRVWQRENISFYITPVLICVNPIRTVGLGDTISAEGLLYSERK
SIO_010081: adpgk
subclass of: SO_0000673
so part of: adpgk
location: join(1170596..1170801,1172315..1172540,1180863..1180925,1186975..1187095,1188896..1189092,1197839..1197937,1199207..1199761)
location: region:1170596-1199761:1
so has part: feature:1170596-1170801:1:exon
so has part: feature:1172315-1172540:1:exon
so has part: feature:1180863-1180925:1:exon
so has part: feature:1186975-1187095:1:exon
so has part: feature:1188896-1189092:1:exon
so has part: feature:1197839-1197937:1:exon
so has part: feature:1199207-1199761:1:exon

XP_038640097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1170596-1170801:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1172315-1172540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1180863-1180925:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1186975-1187095:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188896-1189092:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1197839-1197937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1199207-1199761:1:exon

LOC119956855
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956855
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1205075..1429807
location: region:1205075-1429807:1
so has part: feature:1205075-1429807:1:exon
subclass of: SO_0000010

119956855
type: Gene
SIO_000068: ncbigene

position:1205075:1
position: 1205075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429807:1
position: 1429807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1205075-1429807:1:exon

LOC119956855
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956855
product: neogenin-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_038784366.1
SIO_010081: LOC119956855
subclass of: SO_0000673
so part of: LOC119956855
location: join(1205075..1205319,1278038..1278355,1334942..1335217,1335747..1335897,1342498..1342634,1350836..1350990,1353527..1353647,1362445..1362661,1365969..1366123,1376199..1376347,1380530..1380668,1380794..1380843,1381714..1381855,1383797..1383907,1385820..1386014,1389210..1389305,1391594..1391829,1392919..1393057,1395003..1395110,1396227..1396421,1415923..1416000,1416758..1416905,1420244..1420479,1421917..1422009,1425479..1425736,1426182..1426318,1428154..1429807)
location: region:1205075-1429807:1
so has part: feature:1205075-1205319:1:exon
so has part: feature:1278038-1278355:1:exon
so has part: feature:1334942-1335217:1:exon
so has part: feature:1335747-1335897:1:exon
so has part: feature:1342498-1342634:1:exon
so has part: feature:1350836-1350990:1:exon
so has part: feature:1353527-1353647:1:exon
so has part: feature:1362445-1362661:1:exon
so has part: feature:1365969-1366123:1:exon
so has part: feature:1376199-1376347:1:exon
so has part: feature:1380530-1380668:1:exon
so has part: feature:1380794-1380843:1:exon
so has part: feature:1381714-1381855:1:exon
so has part: feature:1383797-1383907:1:exon
so has part: feature:1385820-1386014:1:exon
so has part: feature:1389210-1389305:1:exon
so has part: feature:1391594-1391829:1:exon
so has part: feature:1392919-1393057:1:exon
so has part: feature:1395003-1395110:1:exon
so has part: feature:1396227-1396421:1:exon
so has part: feature:1415923-1416000:1:exon
so has part: feature:1416758-1416905:1:exon
so has part: feature:1420244-1420479:1:exon
so has part: feature:1421917-1422009:1:exon
so has part: feature:1425479-1425736:1:exon
so has part: feature:1426182-1426318:1:exon
so has part: feature:1428154-1429807:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1205075-1205319:1:exon

position:1205319:1
position: 1205319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1278038-1278355:1:exon

position:1278038:1
position: 1278038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1278355:1
position: 1278355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1334942-1335217:1:exon

position:1334942:1
position: 1334942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335217:1
position: 1335217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1335747-1335897:1:exon

position:1335747:1
position: 1335747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335897:1
position: 1335897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1342498-1342634:1:exon

position:1342498:1
position: 1342498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1342634:1
position: 1342634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1350836-1350990:1:exon

position:1350836:1
position: 1350836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1350990:1
position: 1350990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1353527-1353647:1:exon

position:1353527:1
position: 1353527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1353647:1
position: 1353647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1362445-1362661:1:exon

position:1362445:1
position: 1362445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1362661:1
position: 1362661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1365969-1366123:1:exon

position:1365969:1
position: 1365969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1366123:1
position: 1366123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1376199-1376347:1:exon

position:1376199:1
position: 1376199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376347:1
position: 1376347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1380530-1380668:1:exon

position:1380530:1
position: 1380530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1380668:1
position: 1380668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1380794-1380843:1:exon

position:1380794:1
position: 1380794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1380843:1
position: 1380843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1381714-1381855:1:exon

position:1381714:1
position: 1381714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1381855:1
position: 1381855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1383797-1383907:1:exon

position:1383797:1
position: 1383797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383907:1
position: 1383907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1385820-1386014:1:exon

position:1385820:1
position: 1385820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386014:1
position: 1386014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1389210-1389305:1:exon

position:1389210:1
position: 1389210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1389305:1
position: 1389305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1391594-1391829:1:exon

position:1391594:1
position: 1391594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1391829:1
position: 1391829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1392919-1393057:1:exon

position:1392919:1
position: 1392919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1393057:1
position: 1393057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1395003-1395110:1:exon

position:1395003:1
position: 1395003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1395110:1
position: 1395110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1396227-1396421:1:exon

position:1396227:1
position: 1396227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1396421:1
position: 1396421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1415923-1416000:1:exon

position:1415923:1
position: 1415923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1416000:1
position: 1416000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1416758-1416905:1:exon

position:1416758:1
position: 1416758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1416905:1
position: 1416905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1420244-1420479:1:exon

position:1420244:1
position: 1420244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1420479:1
position: 1420479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1421917-1422009:1:exon

position:1421917:1
position: 1421917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1422009:1
position: 1422009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1425479-1425736:1:exon

position:1425479:1
position: 1425479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425736:1
position: 1425736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1426182-1426318:1:exon

position:1426182:1
position: 1426182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1426318:1
position: 1426318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1428154-1429807:1:exon

position:1428154:1
position: 1428154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119956855
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956855
product: neogenin-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_038784367.1
SIO_010081: LOC119956855
subclass of: SO_0000673
so part of: LOC119956855
location: join(1205075..1205319,1278038..1278355,1334942..1335217,1335747..1335897,1342498..1342634,1350836..1350990,1353527..1353647,1362505..1362661,1365969..1366123,1376199..1376347,1380530..1380668,1380794..1380843,1381714..1381855,1383797..1383907,1385820..1386014,1389210..1389305,1391594..1391829,1392919..1393057,1395003..1395110,1396227..1396421,1415923..1416000,1416758..1416905,1420244..1420479,1421917..1422009,1425479..1425736,1426182..1426318,1428154..1429807)
location: region:1205075-1429807:1
so has part: feature:1205075-1205319:1:exon
so has part: feature:1278038-1278355:1:exon
so has part: feature:1334942-1335217:1:exon
so has part: feature:1335747-1335897:1:exon
so has part: feature:1342498-1342634:1:exon
so has part: feature:1350836-1350990:1:exon
so has part: feature:1353527-1353647:1:exon
so has part: feature:1362505-1362661:1:exon
so has part: feature:1365969-1366123:1:exon
so has part: feature:1376199-1376347:1:exon
so has part: feature:1380530-1380668:1:exon
so has part: feature:1380794-1380843:1:exon
so has part: feature:1381714-1381855:1:exon
so has part: feature:1383797-1383907:1:exon
so has part: feature:1385820-1386014:1:exon
so has part: feature:1389210-1389305:1:exon
so has part: feature:1391594-1391829:1:exon
so has part: feature:1392919-1393057:1:exon
so has part: feature:1395003-1395110:1:exon
so has part: feature:1396227-1396421:1:exon
so has part: feature:1415923-1416000:1:exon
so has part: feature:1416758-1416905:1:exon
so has part: feature:1420244-1420479:1:exon
so has part: feature:1421917-1422009:1:exon
so has part: feature:1425479-1425736:1:exon
so has part: feature:1426182-1426318:1:exon
so has part: feature:1428154-1429807:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1205075-1205319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1278038-1278355:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1334942-1335217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335747-1335897:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342498-1342634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350836-1350990:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1353527-1353647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362505-1362661:1:exon

position:1362505:1
position: 1362505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1365969-1366123:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376199-1376347:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1380530-1380668:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380794-1380843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381714-1381855:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1383797-1383907:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1385820-1386014:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1389210-1389305:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1391594-1391829:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1392919-1393057:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1395003-1395110:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1396227-1396421:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1415923-1416000:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1416758-1416905:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1420244-1420479:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1421917-1422009:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1425479-1425736:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1426182-1426318:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1428154-1429807:1:exon

LOC119956855
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956855
product: neogenin-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_038784362.1
SIO_010081: LOC119956855
subclass of: SO_0000673
so part of: LOC119956855
location: join(1205076..1205319,1278038..1278355,1334942..1335217,1335747..1335897,1342498..1342634,1350836..1350990,1353527..1353647,1362445..1362661,1365969..1366123,1376199..1376347,1380530..1380668,1380794..1380843,1381714..1381855,1383797..1383907,1385820..1386014,1389210..1389305,1391594..1391829,1392919..1393057,1395003..1395110,1396227..1396421,1415923..1416000,1416758..1416905,1420244..1420479,1421917..1422009,1424080..1424229,1425479..1425736,1426182..1426318,1428154..1429807)
location: region:1205076-1429807:1
so has part: feature:1205076-1205319:1:exon
so has part: feature:1278038-1278355:1:exon
so has part: feature:1334942-1335217:1:exon
so has part: feature:1335747-1335897:1:exon
so has part: feature:1342498-1342634:1:exon
so has part: feature:1350836-1350990:1:exon
so has part: feature:1353527-1353647:1:exon
so has part: feature:1362445-1362661:1:exon
so has part: feature:1365969-1366123:1:exon
so has part: feature:1376199-1376347:1:exon
so has part: feature:1380530-1380668:1:exon
so has part: feature:1380794-1380843:1:exon
so has part: feature:1381714-1381855:1:exon
so has part: feature:1383797-1383907:1:exon
so has part: feature:1385820-1386014:1:exon
so has part: feature:1389210-1389305:1:exon
so has part: feature:1391594-1391829:1:exon
so has part: feature:1392919-1393057:1:exon
so has part: feature:1395003-1395110:1:exon
so has part: feature:1396227-1396421:1:exon
so has part: feature:1415923-1416000:1:exon
so has part: feature:1416758-1416905:1:exon
so has part: feature:1420244-1420479:1:exon
so has part: feature:1421917-1422009:1:exon
so has part: feature:1424080-1424229:1:exon
so has part: feature:1425479-1425736:1:exon
so has part: feature:1426182-1426318:1:exon
so has part: feature:1428154-1429807:1:exon

position:1205076:1
position: 1205076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1205076-1205319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1278038-1278355:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1334942-1335217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335747-1335897:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342498-1342634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350836-1350990:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1353527-1353647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362445-1362661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1365969-1366123:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376199-1376347:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1380530-1380668:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380794-1380843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381714-1381855:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1383797-1383907:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1385820-1386014:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1389210-1389305:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1391594-1391829:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1392919-1393057:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1395003-1395110:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1396227-1396421:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1415923-1416000:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1416758-1416905:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1420244-1420479:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1421917-1422009:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1424080-1424229:1:exon

position:1424080:1
position: 1424080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1424229:1
position: 1424229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1425479-1425736:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1426182-1426318:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1428154-1429807:1:exon

LOC119956855
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956855
product: neogenin-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_038784363.1
SIO_010081: LOC119956855
subclass of: SO_0000673
so part of: LOC119956855
location: join(1205076..1205319,1278038..1278355,1334942..1335217,1335747..1335897,1342498..1342634,1350836..1350990,1353527..1353647,1362445..1362661,1365969..1366123,1376199..1376347,1380530..1380668,1380794..1380843,1381714..1381855,1383797..1383907,1385820..1386014,1389210..1389305,1391654..1391829,1392919..1393057,1395003..1395110,1396227..1396421,1415923..1416000,1416758..1416905,1420244..1420479,1421917..1422009,1424080..1424229,1425479..1425736,1426182..1426318,1428154..1429807)
location: region:1205076-1429807:1
so has part: feature:1205076-1205319:1:exon
so has part: feature:1278038-1278355:1:exon
so has part: feature:1334942-1335217:1:exon
so has part: feature:1335747-1335897:1:exon
so has part: feature:1342498-1342634:1:exon
so has part: feature:1350836-1350990:1:exon
so has part: feature:1353527-1353647:1:exon
so has part: feature:1362445-1362661:1:exon
so has part: feature:1365969-1366123:1:exon
so has part: feature:1376199-1376347:1:exon
so has part: feature:1380530-1380668:1:exon
so has part: feature:1380794-1380843:1:exon
so has part: feature:1381714-1381855:1:exon
so has part: feature:1383797-1383907:1:exon
so has part: feature:1385820-1386014:1:exon
so has part: feature:1389210-1389305:1:exon
so has part: feature:1391654-1391829:1:exon
so has part: feature:1392919-1393057:1:exon
so has part: feature:1395003-1395110:1:exon
so has part: feature:1396227-1396421:1:exon
so has part: feature:1415923-1416000:1:exon
so has part: feature:1416758-1416905:1:exon
so has part: feature:1420244-1420479:1:exon
so has part: feature:1421917-1422009:1:exon
so has part: feature:1424080-1424229:1:exon
so has part: feature:1425479-1425736:1:exon
so has part: feature:1426182-1426318:1:exon
so has part: feature:1428154-1429807:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1205076-1205319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1278038-1278355:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1334942-1335217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335747-1335897:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342498-1342634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350836-1350990:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1353527-1353647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362445-1362661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1365969-1366123:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376199-1376347:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1380530-1380668:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380794-1380843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381714-1381855:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1383797-1383907:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1385820-1386014:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1389210-1389305:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1391654-1391829:1:exon

position:1391654:1
position: 1391654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1392919-1393057:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1395003-1395110:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1396227-1396421:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1415923-1416000:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1416758-1416905:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1420244-1420479:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1421917-1422009:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1424080-1424229:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1425479-1425736:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1426182-1426318:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1428154-1429807:1:exon

LOC119956855
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956855
product: neogenin-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_038784364.1
SIO_010081: LOC119956855
subclass of: SO_0000673
so part of: LOC119956855
location: join(1205076..1205319,1278038..1278355,1334942..1335217,1335747..1335897,1342498..1342634,1350836..1350990,1353527..1353647,1362505..1362661,1365969..1366123,1376199..1376347,1380530..1380668,1380794..1380843,1381714..1381855,1383797..1383907,1385820..1386014,1389210..1389305,1391594..1391829,1392919..1393057,1395003..1395110,1396227..1396421,1415923..1416000,1416758..1416905,1420244..1420479,1421917..1422009,1424080..1424229,1425479..1425736,1426182..1426318,1428154..1429807)
location: region:1205076-1429807:1
so has part: feature:1205076-1205319:1:exon
so has part: feature:1278038-1278355:1:exon
so has part: feature:1334942-1335217:1:exon
so has part: feature:1335747-1335897:1:exon
so has part: feature:1342498-1342634:1:exon
so has part: feature:1350836-1350990:1:exon
so has part: feature:1353527-1353647:1:exon
so has part: feature:1362505-1362661:1:exon
so has part: feature:1365969-1366123:1:exon
so has part: feature:1376199-1376347:1:exon
so has part: feature:1380530-1380668:1:exon
so has part: feature:1380794-1380843:1:exon
so has part: feature:1381714-1381855:1:exon
so has part: feature:1383797-1383907:1:exon
so has part: feature:1385820-1386014:1:exon
so has part: feature:1389210-1389305:1:exon
so has part: feature:1391594-1391829:1:exon
so has part: feature:1392919-1393057:1:exon
so has part: feature:1395003-1395110:1:exon
so has part: feature:1396227-1396421:1:exon
so has part: feature:1415923-1416000:1:exon
so has part: feature:1416758-1416905:1:exon
so has part: feature:1420244-1420479:1:exon
so has part: feature:1421917-1422009:1:exon
so has part: feature:1424080-1424229:1:exon
so has part: feature:1425479-1425736:1:exon
so has part: feature:1426182-1426318:1:exon
so has part: feature:1428154-1429807:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1205076-1205319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1278038-1278355:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1334942-1335217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335747-1335897:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342498-1342634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350836-1350990:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1353527-1353647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362505-1362661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1365969-1366123:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376199-1376347:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1380530-1380668:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380794-1380843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381714-1381855:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1383797-1383907:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1385820-1386014:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1389210-1389305:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1391594-1391829:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1392919-1393057:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1395003-1395110:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1396227-1396421:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1415923-1416000:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1416758-1416905:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1420244-1420479:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1421917-1422009:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1424080-1424229:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1425479-1425736:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1426182-1426318:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1428154-1429807:1:exon

LOC119956855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956855
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neogenin-like isoform X1
translation: MLGIVRRSPPVLADPSSRSRPIPAPAPALPAPSPDTGGERPRPEAGRMAETRPRILLLLAALSTATGTESVVRTFTPFYFTVEPADTLAIRGSSVILNCSVFSEPSAKIEWRKDGTFLNLVSDERRQMLPEGSLLIRSVVHSKHHKPDEGFYQCVATIDSLGTIVSRTAKMTVTGLPRFSGQPQAVSVHQGDTALLGCEVNGDLVPFVSWEHSQQLVVLEGRFLKLPNGHLEIGNVSDSDAGSYCCSVETAGLSKTSEETELTVLPEIGAERKMTFLQPPVSVSKVAGQTVILPCVVSGYPTPTIHWTQNSEIILERFQKFTLVGSGSLQISDVTEDDSGIYDCIAESGNETLHAQAELSVQVPPHFLNRPVNIYAHESMDIVFECEVTGIPMPTVKWIKNGDMVIPSDYFKIVNERNLQVLGLVKSDEGLYQCVAENDVGNERASAQLIILEHDVPIPTFTPPSLTSATADHLAATTTGLLPSAPRDVMALLVSTRFIKLTWRPPADPNAEILTYSVYYSRDGINRERVEDTSRPGDLEVTIGELMPDVKYVFRVVAHNKHGAGESSAPFKVATQPEVQVPGPAQNLVAQANSPTSITVTWQEPHSDNGPIANYKLYYMEKGAGSEQDVDVGSLSYTMNGLKKFTEYSFRVVAYNKHGPGVSTEEVVATTYSGVPSAPPQNVTLEVRNSKSIVVHWQPPPPGTHNGVITGYNIRYKKGGRRGETDTTGGSQLSQIIDGLERNTEYSFRVSAITVNGTGPSSDWVSAETFESDLDESRVPDKPSSLHVRPLINNIVVSWTPPDNQNIVVRGYAIGYGIGSPHAETIRVDYKQRYYTIENLEPNSHYVITLKAYNKIGEGIPLYESTATRPLTDPFDPSKVYIFDLVNNPYTPVPDPSPMLPPVGVQATVLTHDTIRVTWADSSLPKNQKITDARFYTVRWKTNYPANTKYKTADTTTLSYIVSGLKPNTLYEFSVKVTKGRRSSTWSMTAHGTTFETVPTSPPKDLTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDITAEIHDWVIEPVVGDRLTHQIQDLTLDTTYYFKIQARNSKGMGPLSDFVQFRTPKALGSSGKLGKNPSVLDSGSDTRHSISGHNSPHGSPTSSLDSNTMLIIIISAGVFTIIIVVIIALFCTRRTNYQQKKKRAACKSANGSHKYKGNSKDINPPDLWIHHERLELKPIDKSPEPNPVMTDTPIPRNSQDITPVENSMEKEQQRRNSYLGRELEDGITTLNGRRGLRPKMMMPFDAQPPQPVISAHPIHSLDNPHHHHHCDGPSPPARSYFRHQISSRPLDSAVERANSAESVRNTPNSDMSPAPSSQAHPVENVETDVPAVSYLPGSQEEESNRNVPTAHVRPSHPLKSFAVITIPPASTSYETTSSSTPLLSQTGTNPQVQSVKTASIGTLGRSRSPMAVTVPSAPELAESTKMLEDSDSNYGPDELTEEMTHLTGLMKDLNVITTA
SIO_010081: LOC119956855
subclass of: SO_0000673
so part of: LOC119956855
location: join(1205115..1205319,1278038..1278355,1334942..1335217,1335747..1335897,1342498..1342634,1350836..1350990,1353527..1353647,1362445..1362661,1365969..1366123,1376199..1376347,1380530..1380668,1380794..1380843,1381714..1381855,1383797..1383907,1385820..1386014,1389210..1389305,1391594..1391829,1392919..1393057,1395003..1395110,1396227..1396421,1415923..1416000,1416758..1416905,1420244..1420479,1421917..1422009,1424080..1424229,1425479..1425736,1426182..1426318,1428154..1428237)
location: region:1205115-1428237:1
so has part: feature:1205115-1205319:1:exon
so has part: feature:1278038-1278355:1:exon
so has part: feature:1334942-1335217:1:exon
so has part: feature:1335747-1335897:1:exon
so has part: feature:1342498-1342634:1:exon
so has part: feature:1350836-1350990:1:exon
so has part: feature:1353527-1353647:1:exon
so has part: feature:1362445-1362661:1:exon
so has part: feature:1365969-1366123:1:exon
so has part: feature:1376199-1376347:1:exon
so has part: feature:1380530-1380668:1:exon
so has part: feature:1380794-1380843:1:exon
so has part: feature:1381714-1381855:1:exon
so has part: feature:1383797-1383907:1:exon
so has part: feature:1385820-1386014:1:exon
so has part: feature:1389210-1389305:1:exon
so has part: feature:1391594-1391829:1:exon
so has part: feature:1392919-1393057:1:exon
so has part: feature:1395003-1395110:1:exon
so has part: feature:1396227-1396421:1:exon
so has part: feature:1415923-1416000:1:exon
so has part: feature:1416758-1416905:1:exon
so has part: feature:1420244-1420479:1:exon
so has part: feature:1421917-1422009:1:exon
so has part: feature:1424080-1424229:1:exon
so has part: feature:1425479-1425736:1:exon
so has part: feature:1426182-1426318:1:exon
so has part: feature:1428154-1428237:1:exon

XP_038640290.1
type: Protein
SIO_000068: ncbiprotein

position:1205115:1
position: 1205115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428237:1
position: 1428237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1205115-1205319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1278038-1278355:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1334942-1335217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335747-1335897:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342498-1342634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350836-1350990:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1353527-1353647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362445-1362661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1365969-1366123:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376199-1376347:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1380530-1380668:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380794-1380843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381714-1381855:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1383797-1383907:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1385820-1386014:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1389210-1389305:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1391594-1391829:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1392919-1393057:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1395003-1395110:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1396227-1396421:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1415923-1416000:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1416758-1416905:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1420244-1420479:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1421917-1422009:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1424080-1424229:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1425479-1425736:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1426182-1426318:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1428154-1428237:1:exon

LOC119956855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956855
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neogenin-like isoform X4
translation: MLGIVRRSPPVLADPSSRSRPIPAPAPALPAPSPDTGGERPRPEAGRMAETRPRILLLLAALSTATGTESVVRTFTPFYFTVEPADTLAIRGSSVILNCSVFSEPSAKIEWRKDGTFLNLVSDERRQMLPEGSLLIRSVVHSKHHKPDEGFYQCVATIDSLGTIVSRTAKMTVTGLPRFSGQPQAVSVHQGDTALLGCEVNGDLVPFVSWEHSQQLVVLEGRFLKLPNGHLEIGNVSDSDAGSYCCSVETAGLSKTSEETELTVLPEIGAERKMTFLQPPVSVSKVAGQTVILPCVVSGYPTPTIHWTQNSEIILERFQKFTLVGSGSLQISDVTEDDSGIYDCIAESGNETLHAQAELSVQVPPHFLNRPVNIYAHESMDIVFECEVTGIPMPTVKWIKNGDMVIPSDYFKIVNERNLQVLGLVKSDEGLYQCVAENDVGNERASAQLIILEHDVPIPTFTPPSLTSATADHLAATTTGLLPSAPRDVMALLVSTRFIKLTWRPPADPNAEILTYSVYYSRDGINRERVEDTSRPGDLEVTIGELMPDVKYVFRVVAHNKHGAGESSAPFKVATQPEVQVPGPAQNLVAQANSPTSITVTWQEPHSDNGPIANYKLYYMEKGAGSEQDVDVGSLSYTMNGLKKFTEYSFRVVAYNKHGPGVSTEEVVATTYSGVPSAPPQNVTLEVRNSKSIVVHWQPPPPGTHNGVITGYNIRYKKGGRRGETDTTGGSQLSQIIDGLERNTEYSFRVSAITVNGTGPSSDWVSAETFESDLDESRVPDKPSSLHVRPLINNIVVSWTPPDNQNIVVRGYAIGYGIGSPHAETIRVDYKQRYYTIENLEPNSHYVITLKAYNKIGEGIPLYESTATRPLTDPFDPSKVYIFDLVNNPYTPVPDPSPMLPPVGVQATVLTHDTIRVTWADSSLPKNQKITDARFYTVRWKTNYPANTKYKTADTTTLSYIVSGLKPNTLYEFSVKVTKGRRSSTWSMTAHGTTFETVPTSPPKDLTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDITAEIHDWVIEPVVGDRLTHQIQDLTLDTTYYFKIQARNSKGMGPLSDFVQFRTPKALGSSGKLGKNPSVLDSGSDTRHSISGHNSPHGSPTSSLDSNTMLIIIISAGVFTIIIVVIIALFCTRRTNYQQKKKRAACKSANGSHKYKGNSKDINPPDLWIHHERLELKPIDKSPEPNPVMTDTPIPRNSQDITPVENSMEKEQQRRNSYLGRELEDGITTLNGRRGLRPKMMMPFDAQPPQQSVRNTPNSDMSPAPSSQAHPVENVETDVPAVSYLPGSQEEESNRNVPTAHVRPSHPLKSFAVITIPPASTSYETTSSSTPLLSQTGTNPQVQSVKTASIGTLGRSRSPMAVTVPSAPELAESTKMLEDSDSNYGPDELTEEMTHLTGLMKDLNVITTA
SIO_010081: LOC119956855
subclass of: SO_0000673
so part of: LOC119956855
location: join(1205115..1205319,1278038..1278355,1334942..1335217,1335747..1335897,1342498..1342634,1350836..1350990,1353527..1353647,1362445..1362661,1365969..1366123,1376199..1376347,1380530..1380668,1380794..1380843,1381714..1381855,1383797..1383907,1385820..1386014,1389210..1389305,1391594..1391829,1392919..1393057,1395003..1395110,1396227..1396421,1415923..1416000,1416758..1416905,1420244..1420479,1421917..1422009,1425479..1425736,1426182..1426318,1428154..1428237)
location: region:1205115-1428237:1
so has part: feature:1205115-1205319:1:exon
so has part: feature:1278038-1278355:1:exon
so has part: feature:1334942-1335217:1:exon
so has part: feature:1335747-1335897:1:exon
so has part: feature:1342498-1342634:1:exon
so has part: feature:1350836-1350990:1:exon
so has part: feature:1353527-1353647:1:exon
so has part: feature:1362445-1362661:1:exon
so has part: feature:1365969-1366123:1:exon
so has part: feature:1376199-1376347:1:exon
so has part: feature:1380530-1380668:1:exon
so has part: feature:1380794-1380843:1:exon
so has part: feature:1381714-1381855:1:exon
so has part: feature:1383797-1383907:1:exon
so has part: feature:1385820-1386014:1:exon
so has part: feature:1389210-1389305:1:exon
so has part: feature:1391594-1391829:1:exon
so has part: feature:1392919-1393057:1:exon
so has part: feature:1395003-1395110:1:exon
so has part: feature:1396227-1396421:1:exon
so has part: feature:1415923-1416000:1:exon
so has part: feature:1416758-1416905:1:exon
so has part: feature:1420244-1420479:1:exon
so has part: feature:1421917-1422009:1:exon
so has part: feature:1425479-1425736:1:exon
so has part: feature:1426182-1426318:1:exon
so has part: feature:1428154-1428237:1:exon

XP_038640294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1205115-1205319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1278038-1278355:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1334942-1335217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335747-1335897:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342498-1342634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350836-1350990:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1353527-1353647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362445-1362661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1365969-1366123:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376199-1376347:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1380530-1380668:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380794-1380843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381714-1381855:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1383797-1383907:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1385820-1386014:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1389210-1389305:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1391594-1391829:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1392919-1393057:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1395003-1395110:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1396227-1396421:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1415923-1416000:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1416758-1416905:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1420244-1420479:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1421917-1422009:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1425479-1425736:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1426182-1426318:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1428154-1428237:1:exon

LOC119956855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956855
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neogenin-like isoform X2
translation: MLGIVRRSPPVLADPSSRSRPIPAPAPALPAPSPDTGGERPRPEAGRMAETRPRILLLLAALSTATGTESVVRTFTPFYFTVEPADTLAIRGSSVILNCSVFSEPSAKIEWRKDGTFLNLVSDERRQMLPEGSLLIRSVVHSKHHKPDEGFYQCVATIDSLGTIVSRTAKMTVTGLPRFSGQPQAVSVHQGDTALLGCEVNGDLVPFVSWEHSQQLVVLEGRFLKLPNGHLEIGNVSDSDAGSYCCSVETAGLSKTSEETELTVLPEIGAERKMTFLQPPVSVSKVAGQTVILPCVVSGYPTPTIHWTQNSEIILERFQKFTLVGSGSLQISDVTEDDSGIYDCIAESGNETLHAQAELSVQVPPHFLNRPVNIYAHESMDIVFECEVTGIPMPTVKWIKNGDMVIPSDYFKIVNERNLQVLGLVKSDEGLYQCVAENDVGNERASAQLIILEHDVPIPTFTPPSLTSATADHLAATTTGLLPSAPRDVMALLVSTRFIKLTWRPPADPNAEILTYSVYYSRDGINRERVEDTSRPGDLEVTIGELMPDVKYVFRVVAHNKHGAGESSAPFKVATQPEVQVPGPAQNLVAQANSPTSITVTWQEPHSDNGPIANYKLYYMEKGAGSEQDVDVGSLSYTMNGLKKFTEYSFRVVAYNKHGPGVSTEEVVATTYSGVPSAPPQNVTLEVRNSKSIVVHWQPPPPGTHNGVITGYNIRYKKGGRRGETDTTGGSQLSQIIDGLERNTEYSFRVSAITVNGTGPSSDWVSAETFESDLDESRVPDKPSSLHVRPLINNIVVSWTPPDNQNIVVRGYAIGYGIGSPHAETIRVDYKQRYYTIENLEPNSHYVITLKAYNKIGEGIPLYESTATRPLTVPDPSPMLPPVGVQATVLTHDTIRVTWADSSLPKNQKITDARFYTVRWKTNYPANTKYKTADTTTLSYIVSGLKPNTLYEFSVKVTKGRRSSTWSMTAHGTTFETVPTSPPKDLTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDITAEIHDWVIEPVVGDRLTHQIQDLTLDTTYYFKIQARNSKGMGPLSDFVQFRTPKALGSSGKLGKNPSVLDSGSDTRHSISGHNSPHGSPTSSLDSNTMLIIIISAGVFTIIIVVIIALFCTRRTNYQQKKKRAACKSANGSHKYKGNSKDINPPDLWIHHERLELKPIDKSPEPNPVMTDTPIPRNSQDITPVENSMEKEQQRRNSYLGRELEDGITTLNGRRGLRPKMMMPFDAQPPQPVISAHPIHSLDNPHHHHHCDGPSPPARSYFRHQISSRPLDSAVERANSAESVRNTPNSDMSPAPSSQAHPVENVETDVPAVSYLPGSQEEESNRNVPTAHVRPSHPLKSFAVITIPPASTSYETTSSSTPLLSQTGTNPQVQSVKTASIGTLGRSRSPMAVTVPSAPELAESTKMLEDSDSNYGPDELTEEMTHLTGLMKDLNVITTA
SIO_010081: LOC119956855
subclass of: SO_0000673
so part of: LOC119956855
location: join(1205115..1205319,1278038..1278355,1334942..1335217,1335747..1335897,1342498..1342634,1350836..1350990,1353527..1353647,1362445..1362661,1365969..1366123,1376199..1376347,1380530..1380668,1380794..1380843,1381714..1381855,1383797..1383907,1385820..1386014,1389210..1389305,1391654..1391829,1392919..1393057,1395003..1395110,1396227..1396421,1415923..1416000,1416758..1416905,1420244..1420479,1421917..1422009,1424080..1424229,1425479..1425736,1426182..1426318,1428154..1428237)
location: region:1205115-1428237:1
so has part: feature:1205115-1205319:1:exon
so has part: feature:1278038-1278355:1:exon
so has part: feature:1334942-1335217:1:exon
so has part: feature:1335747-1335897:1:exon
so has part: feature:1342498-1342634:1:exon
so has part: feature:1350836-1350990:1:exon
so has part: feature:1353527-1353647:1:exon
so has part: feature:1362445-1362661:1:exon
so has part: feature:1365969-1366123:1:exon
so has part: feature:1376199-1376347:1:exon
so has part: feature:1380530-1380668:1:exon
so has part: feature:1380794-1380843:1:exon
so has part: feature:1381714-1381855:1:exon
so has part: feature:1383797-1383907:1:exon
so has part: feature:1385820-1386014:1:exon
so has part: feature:1389210-1389305:1:exon
so has part: feature:1391654-1391829:1:exon
so has part: feature:1392919-1393057:1:exon
so has part: feature:1395003-1395110:1:exon
so has part: feature:1396227-1396421:1:exon
so has part: feature:1415923-1416000:1:exon
so has part: feature:1416758-1416905:1:exon
so has part: feature:1420244-1420479:1:exon
so has part: feature:1421917-1422009:1:exon
so has part: feature:1424080-1424229:1:exon
so has part: feature:1425479-1425736:1:exon
so has part: feature:1426182-1426318:1:exon
so has part: feature:1428154-1428237:1:exon

XP_038640291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1205115-1205319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1278038-1278355:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1334942-1335217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335747-1335897:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342498-1342634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350836-1350990:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1353527-1353647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362445-1362661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1365969-1366123:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376199-1376347:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1380530-1380668:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380794-1380843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381714-1381855:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1383797-1383907:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1385820-1386014:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1389210-1389305:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1391654-1391829:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1392919-1393057:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1395003-1395110:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1396227-1396421:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1415923-1416000:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1416758-1416905:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1420244-1420479:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1421917-1422009:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1424080-1424229:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1425479-1425736:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1426182-1426318:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1428154-1428237:1:exon

LOC119956855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956855
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neogenin-like isoform X3
translation: MLGIVRRSPPVLADPSSRSRPIPAPAPALPAPSPDTGGERPRPEAGRMAETRPRILLLLAALSTATGTESVVRTFTPFYFTVEPADTLAIRGSSVILNCSVFSEPSAKIEWRKDGTFLNLVSDERRQMLPEGSLLIRSVVHSKHHKPDEGFYQCVATIDSLGTIVSRTAKMTVTGLPRFSGQPQAVSVHQGDTALLGCEVNGDLVPFVSWEHSQQLVVLEGRFLKLPNGHLEIGNVSDSDAGSYCCSVETAGLSKTSEETELTVLPEIGAERKMTFLQPPVSVSKVAGQTVILPCVVSGYPTPTIHWTQNSEIILERFQKFTLVGSGSLQISDVTEDDSGIYDCIAESGNETLHAQAELSVQVPPHFLNRPVNIYAHESMDIVFECEVTGIPMPTVKWIKNGDMVIPSDYFKIVNERNLQVLGLVKSDEGLYQCVAENDVGNERASAQLIILEHAATTTGLLPSAPRDVMALLVSTRFIKLTWRPPADPNAEILTYSVYYSRDGINRERVEDTSRPGDLEVTIGELMPDVKYVFRVVAHNKHGAGESSAPFKVATQPEVQVPGPAQNLVAQANSPTSITVTWQEPHSDNGPIANYKLYYMEKGAGSEQDVDVGSLSYTMNGLKKFTEYSFRVVAYNKHGPGVSTEEVVATTYSGVPSAPPQNVTLEVRNSKSIVVHWQPPPPGTHNGVITGYNIRYKKGGRRGETDTTGGSQLSQIIDGLERNTEYSFRVSAITVNGTGPSSDWVSAETFESDLDESRVPDKPSSLHVRPLINNIVVSWTPPDNQNIVVRGYAIGYGIGSPHAETIRVDYKQRYYTIENLEPNSHYVITLKAYNKIGEGIPLYESTATRPLTDPFDPSKVYIFDLVNNPYTPVPDPSPMLPPVGVQATVLTHDTIRVTWADSSLPKNQKITDARFYTVRWKTNYPANTKYKTADTTTLSYIVSGLKPNTLYEFSVKVTKGRRSSTWSMTAHGTTFETVPTSPPKDLTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDITAEIHDWVIEPVVGDRLTHQIQDLTLDTTYYFKIQARNSKGMGPLSDFVQFRTPKALGSSGKLGKNPSVLDSGSDTRHSISGHNSPHGSPTSSLDSNTMLIIIISAGVFTIIIVVIIALFCTRRTNYQQKKKRAACKSANGSHKYKGNSKDINPPDLWIHHERLELKPIDKSPEPNPVMTDTPIPRNSQDITPVENSMEKEQQRRNSYLGRELEDGITTLNGRRGLRPKMMMPFDAQPPQPVISAHPIHSLDNPHHHHHCDGPSPPARSYFRHQISSRPLDSAVERANSAESVRNTPNSDMSPAPSSQAHPVENVETDVPAVSYLPGSQEEESNRNVPTAHVRPSHPLKSFAVITIPPASTSYETTSSSTPLLSQTGTNPQVQSVKTASIGTLGRSRSPMAVTVPSAPELAESTKMLEDSDSNYGPDELTEEMTHLTGLMKDLNVITTA
SIO_010081: LOC119956855
subclass of: SO_0000673
so part of: LOC119956855
location: join(1205115..1205319,1278038..1278355,1334942..1335217,1335747..1335897,1342498..1342634,1350836..1350990,1353527..1353647,1362505..1362661,1365969..1366123,1376199..1376347,1380530..1380668,1380794..1380843,1381714..1381855,1383797..1383907,1385820..1386014,1389210..1389305,1391594..1391829,1392919..1393057,1395003..1395110,1396227..1396421,1415923..1416000,1416758..1416905,1420244..1420479,1421917..1422009,1424080..1424229,1425479..1425736,1426182..1426318,1428154..1428237)
location: region:1205115-1428237:1
so has part: feature:1205115-1205319:1:exon
so has part: feature:1278038-1278355:1:exon
so has part: feature:1334942-1335217:1:exon
so has part: feature:1335747-1335897:1:exon
so has part: feature:1342498-1342634:1:exon
so has part: feature:1350836-1350990:1:exon
so has part: feature:1353527-1353647:1:exon
so has part: feature:1362505-1362661:1:exon
so has part: feature:1365969-1366123:1:exon
so has part: feature:1376199-1376347:1:exon
so has part: feature:1380530-1380668:1:exon
so has part: feature:1380794-1380843:1:exon
so has part: feature:1381714-1381855:1:exon
so has part: feature:1383797-1383907:1:exon
so has part: feature:1385820-1386014:1:exon
so has part: feature:1389210-1389305:1:exon
so has part: feature:1391594-1391829:1:exon
so has part: feature:1392919-1393057:1:exon
so has part: feature:1395003-1395110:1:exon
so has part: feature:1396227-1396421:1:exon
so has part: feature:1415923-1416000:1:exon
so has part: feature:1416758-1416905:1:exon
so has part: feature:1420244-1420479:1:exon
so has part: feature:1421917-1422009:1:exon
so has part: feature:1424080-1424229:1:exon
so has part: feature:1425479-1425736:1:exon
so has part: feature:1426182-1426318:1:exon
so has part: feature:1428154-1428237:1:exon

XP_038640292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1205115-1205319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1278038-1278355:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1334942-1335217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335747-1335897:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342498-1342634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350836-1350990:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1353527-1353647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362505-1362661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1365969-1366123:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376199-1376347:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1380530-1380668:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380794-1380843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381714-1381855:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1383797-1383907:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1385820-1386014:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1389210-1389305:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1391594-1391829:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1392919-1393057:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1395003-1395110:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1396227-1396421:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1415923-1416000:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1416758-1416905:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1420244-1420479:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1421917-1422009:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1424080-1424229:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1425479-1425736:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1426182-1426318:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1428154-1428237:1:exon

LOC119956855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956855
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neogenin-like isoform X5
translation: MLGIVRRSPPVLADPSSRSRPIPAPAPALPAPSPDTGGERPRPEAGRMAETRPRILLLLAALSTATGTESVVRTFTPFYFTVEPADTLAIRGSSVILNCSVFSEPSAKIEWRKDGTFLNLVSDERRQMLPEGSLLIRSVVHSKHHKPDEGFYQCVATIDSLGTIVSRTAKMTVTGLPRFSGQPQAVSVHQGDTALLGCEVNGDLVPFVSWEHSQQLVVLEGRFLKLPNGHLEIGNVSDSDAGSYCCSVETAGLSKTSEETELTVLPEIGAERKMTFLQPPVSVSKVAGQTVILPCVVSGYPTPTIHWTQNSEIILERFQKFTLVGSGSLQISDVTEDDSGIYDCIAESGNETLHAQAELSVQVPPHFLNRPVNIYAHESMDIVFECEVTGIPMPTVKWIKNGDMVIPSDYFKIVNERNLQVLGLVKSDEGLYQCVAENDVGNERASAQLIILEHAATTTGLLPSAPRDVMALLVSTRFIKLTWRPPADPNAEILTYSVYYSRDGINRERVEDTSRPGDLEVTIGELMPDVKYVFRVVAHNKHGAGESSAPFKVATQPEVQVPGPAQNLVAQANSPTSITVTWQEPHSDNGPIANYKLYYMEKGAGSEQDVDVGSLSYTMNGLKKFTEYSFRVVAYNKHGPGVSTEEVVATTYSGVPSAPPQNVTLEVRNSKSIVVHWQPPPPGTHNGVITGYNIRYKKGGRRGETDTTGGSQLSQIIDGLERNTEYSFRVSAITVNGTGPSSDWVSAETFESDLDESRVPDKPSSLHVRPLINNIVVSWTPPDNQNIVVRGYAIGYGIGSPHAETIRVDYKQRYYTIENLEPNSHYVITLKAYNKIGEGIPLYESTATRPLTDPFDPSKVYIFDLVNNPYTPVPDPSPMLPPVGVQATVLTHDTIRVTWADSSLPKNQKITDARFYTVRWKTNYPANTKYKTADTTTLSYIVSGLKPNTLYEFSVKVTKGRRSSTWSMTAHGTTFETVPTSPPKDLTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDITAEIHDWVIEPVVGDRLTHQIQDLTLDTTYYFKIQARNSKGMGPLSDFVQFRTPKALGSSGKLGKNPSVLDSGSDTRHSISGHNSPHGSPTSSLDSNTMLIIIISAGVFTIIIVVIIALFCTRRTNYQQKKKRAACKSANGSHKYKGNSKDINPPDLWIHHERLELKPIDKSPEPNPVMTDTPIPRNSQDITPVENSMEKEQQRRNSYLGRELEDGITTLNGRRGLRPKMMMPFDAQPPQQSVRNTPNSDMSPAPSSQAHPVENVETDVPAVSYLPGSQEEESNRNVPTAHVRPSHPLKSFAVITIPPASTSYETTSSSTPLLSQTGTNPQVQSVKTASIGTLGRSRSPMAVTVPSAPELAESTKMLEDSDSNYGPDELTEEMTHLTGLMKDLNVITTA
SIO_010081: LOC119956855
subclass of: SO_0000673
so part of: LOC119956855
location: join(1205115..1205319,1278038..1278355,1334942..1335217,1335747..1335897,1342498..1342634,1350836..1350990,1353527..1353647,1362505..1362661,1365969..1366123,1376199..1376347,1380530..1380668,1380794..1380843,1381714..1381855,1383797..1383907,1385820..1386014,1389210..1389305,1391594..1391829,1392919..1393057,1395003..1395110,1396227..1396421,1415923..1416000,1416758..1416905,1420244..1420479,1421917..1422009,1425479..1425736,1426182..1426318,1428154..1428237)
location: region:1205115-1428237:1
so has part: feature:1205115-1205319:1:exon
so has part: feature:1278038-1278355:1:exon
so has part: feature:1334942-1335217:1:exon
so has part: feature:1335747-1335897:1:exon
so has part: feature:1342498-1342634:1:exon
so has part: feature:1350836-1350990:1:exon
so has part: feature:1353527-1353647:1:exon
so has part: feature:1362505-1362661:1:exon
so has part: feature:1365969-1366123:1:exon
so has part: feature:1376199-1376347:1:exon
so has part: feature:1380530-1380668:1:exon
so has part: feature:1380794-1380843:1:exon
so has part: feature:1381714-1381855:1:exon
so has part: feature:1383797-1383907:1:exon
so has part: feature:1385820-1386014:1:exon
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so has part: feature:1391594-1391829:1:exon
so has part: feature:1392919-1393057:1:exon
so has part: feature:1395003-1395110:1:exon
so has part: feature:1396227-1396421:1:exon
so has part: feature:1415923-1416000:1:exon
so has part: feature:1416758-1416905:1:exon
so has part: feature:1420244-1420479:1:exon
so has part: feature:1421917-1422009:1:exon
so has part: feature:1425479-1425736:1:exon
so has part: feature:1426182-1426318:1:exon
so has part: feature:1428154-1428237:1:exon

XP_038640295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1205115-1205319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1278038-1278355:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1334942-1335217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335747-1335897:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342498-1342634:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1350836-1350990:1:exon

urn:…
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SIO_000628: feature:1353527-1353647:1:exon

urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:1365969-1366123:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376199-1376347:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1380530-1380668:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380794-1380843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1381714-1381855:1:exon

urn:…
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urn:…
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urn:…
SIO_000300: 16
SIO_000628: feature:1389210-1389305:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1391594-1391829:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1392919-1393057:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1395003-1395110:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1396227-1396421:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1415923-1416000:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1416758-1416905:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1420244-1420479:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1421917-1422009:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1425479-1425736:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1426182-1426318:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1428154-1428237:1:exon

bbs4
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: bbs4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1430603..1483365)
location: region:1430603-1483365:-1
so has part: feature:1430603-1483365:-1:exon
subclass of: SO_0000010

119956856
type: Gene
SIO_000068: ncbigene

position:1430603:-1
position: 1430603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1483365:-1
position: 1483365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1430603-1483365:-1:exon

bbs4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: bbs4
product: Bardet-Biedl syndrome 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_038784370.1
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(1430603..1433337,1436454..1436664,1439926..1440070,1442380..1442449,1443893..1444064,1446324..1446476,1446912..1446980,1452707..1452761,1458470..1458597,1464891..1464944,1465191..1465263,1466224..1466335,1470987..1471050,1471596..1471675,1473429..1473471,1478089..1478161,1483283..1483365))
location: region:1430603-1483365:-1
so has part: feature:1483283-1483365:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:1483283-1483365:-1:exon

position:1483283:-1
position: 1483283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1478089-1478161:-1:exon

position:1478089:-1
position: 1478089
reference: sequence
type: ReverseStrandPosition
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position:1478161:-1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:1473429-1473471:-1:exon

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position: 1473429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1473471:-1
position: 1473471
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:1471596-1471675:-1:exon

position:1471596:-1
position: 1471596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1471675:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:1470987-1471050:-1:exon

position:1470987:-1
position: 1470987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1471050:-1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:1466224-1466335:-1:exon

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position: 1466224
reference: sequence
type: ReverseStrandPosition
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position:1466335:-1
position: 1466335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1465191-1465263:-1:exon

position:1465191:-1
position: 1465191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1465263:-1
position: 1465263
reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1464891-1464944:-1:exon

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position: 1464891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1464944:-1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:1458470-1458597:-1:exon

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position: 1458470
reference: sequence
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position:1458597:-1
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:1452707-1452761:-1:exon

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position: 1452707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452761:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:1446912-1446980:-1:exon

position:1446912:-1
position: 1446912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1446980:-1
position: 1446980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1446324-1446476:-1:exon

position:1446324:-1
position: 1446324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1446476:-1
position: 1446476
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:1443893-1444064:-1:exon

position:1443893:-1
position: 1443893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1444064:-1
position: 1444064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1442380-1442449:-1:exon

position:1442380:-1
position: 1442380
reference: sequence
type: ReverseStrandPosition
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position:1442449:-1
position: 1442449
reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:1439926-1440070:-1:exon

position:1439926:-1
position: 1439926
reference: sequence
type: ReverseStrandPosition
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position:1440070:-1
position: 1440070
reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:1436454-1436664:-1:exon

position:1436454:-1
position: 1436454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1436664:-1
position: 1436664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1430603-1433337:-1:exon

position:1433337:-1
position: 1433337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

bbs4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: bbs4
product: Bardet-Biedl syndrome 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038784368.1
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(1430603..1433337,1436454..1436664,1439926..1440070,1442380..1442449,1443893..1444064,1446324..1446476,1446912..1446980,1452707..1452761,1458470..1458597,1464891..1464944,1465191..1465263,1466224..1466335,1470987..1471050,1473429..1473471,1478089..1478161,1483283..1483359))
location: region:1430603-1483359:-1
so has part: feature:1483283-1483359:-1:exon
so has part: feature:1478089-1478161:-1:exon
so has part: feature:1473429-1473471:-1:exon
so has part: feature:1470987-1471050:-1:exon
so has part: feature:1466224-1466335:-1:exon
so has part: feature:1465191-1465263:-1:exon
so has part: feature:1464891-1464944:-1:exon
so has part: feature:1458470-1458597:-1:exon
so has part: feature:1452707-1452761:-1:exon
so has part: feature:1446912-1446980:-1:exon
so has part: feature:1446324-1446476:-1:exon
so has part: feature:1443893-1444064:-1:exon
so has part: feature:1442380-1442449:-1:exon
so has part: feature:1439926-1440070:-1:exon
so has part: feature:1436454-1436664:-1:exon
so has part: feature:1430603-1433337:-1:exon

position:1483359:-1
position: 1483359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1483283-1483359:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1478089-1478161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1473429-1473471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1470987-1471050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466224-1466335:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1465191-1465263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1464891-1464944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1458470-1458597:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1452707-1452761:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1446912-1446980:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1446324-1446476:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1443893-1444064:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1442380-1442449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1439926-1440070:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1436454-1436664:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1430603-1433337:-1:exon

bbs4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: bbs4
product: Bardet-Biedl syndrome 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038784374.1
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(1430603..1433337,1436454..1436664,1439926..1440070,1442380..1442449,1443893..1444064,1446324..1446476,1446912..1446980,1452707..1452761,1458470..1458597,1464891..1464944,1465191..1465263,1466224..1466335,1470987..1471050,1473429..1473471,1476747..1476927,1478089..1478161,1483283..1483319))
location: region:1430603-1483319:-1
so has part: feature:1483283-1483319:-1:exon
so has part: feature:1478089-1478161:-1:exon
so has part: feature:1476747-1476927:-1:exon
so has part: feature:1473429-1473471:-1:exon
so has part: feature:1470987-1471050:-1:exon
so has part: feature:1466224-1466335:-1:exon
so has part: feature:1465191-1465263:-1:exon
so has part: feature:1464891-1464944:-1:exon
so has part: feature:1458470-1458597:-1:exon
so has part: feature:1452707-1452761:-1:exon
so has part: feature:1446912-1446980:-1:exon
so has part: feature:1446324-1446476:-1:exon
so has part: feature:1443893-1444064:-1:exon
so has part: feature:1442380-1442449:-1:exon
so has part: feature:1439926-1440070:-1:exon
so has part: feature:1436454-1436664:-1:exon
so has part: feature:1430603-1433337:-1:exon

position:1483319:-1
position: 1483319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1483283-1483319:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1478089-1478161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1476747-1476927:-1:exon

position:1476747:-1
position: 1476747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1476927:-1
position: 1476927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1473429-1473471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1470987-1471050:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1466224-1466335:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1465191-1465263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1464891-1464944:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1458470-1458597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1452707-1452761:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1446912-1446980:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1446324-1446476:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1443893-1444064:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1442380-1442449:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1439926-1440070:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1436454-1436664:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1430603-1433337:-1:exon

bbs4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: bbs4
product: Bardet-Biedl syndrome 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038784369.1
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(1430603..1433337,1436454..1436664,1439926..1440070,1442380..1442449,1443893..1444064,1446324..1446476,1446912..1446980,1452707..1452761,1458470..1458597,1464891..1464944,1465191..1465263,1466224..1466335,1470987..1471050,1471596..1471675,1473429..1473471,1476747..1476927,1478089..1478161,1483283..1483319))
location: region:1430603-1483319:-1
so has part: feature:1483283-1483319:-1:exon
so has part: feature:1478089-1478161:-1:exon
so has part: feature:1476747-1476927:-1:exon
so has part: feature:1473429-1473471:-1:exon
so has part: feature:1471596-1471675:-1:exon
so has part: feature:1470987-1471050:-1:exon
so has part: feature:1466224-1466335:-1:exon
so has part: feature:1465191-1465263:-1:exon
so has part: feature:1464891-1464944:-1:exon
so has part: feature:1458470-1458597:-1:exon
so has part: feature:1452707-1452761:-1:exon
so has part: feature:1446912-1446980:-1:exon
so has part: feature:1446324-1446476:-1:exon
so has part: feature:1443893-1444064:-1:exon
so has part: feature:1442380-1442449:-1:exon
so has part: feature:1439926-1440070:-1:exon
so has part: feature:1436454-1436664:-1:exon
so has part: feature:1430603-1433337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1483283-1483319:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1478089-1478161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1476747-1476927:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1473429-1473471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1471596-1471675:-1:exon

urn:…
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SIO_000628: feature:1470987-1471050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1466224-1466335:-1:exon

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SIO_000300: 8
SIO_000628: feature:1465191-1465263:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1464891-1464944:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1458470-1458597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1452707-1452761:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1446912-1446980:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1446324-1446476:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1443893-1444064:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1442380-1442449:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1439926-1440070:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1436454-1436664:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1430603-1433337:-1:exon

bbs4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: bbs4
product: Bardet-Biedl syndrome 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038784372.1
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(1430603..1433337,1436454..1436664,1439926..1440070,1442380..1442449,1443893..1444064,1446324..1446476,1446912..1446980,1452707..1452761,1458470..1458597,1464891..1464944,1465191..1465263,1466224..1466335,1470987..1471050,1473429..1473471,1478089..1478178,1483283..1483318))
location: region:1430603-1483318:-1
so has part: feature:1483283-1483318:-1:exon
so has part: feature:1478089-1478178:-1:exon
so has part: feature:1473429-1473471:-1:exon
so has part: feature:1470987-1471050:-1:exon
so has part: feature:1466224-1466335:-1:exon
so has part: feature:1465191-1465263:-1:exon
so has part: feature:1464891-1464944:-1:exon
so has part: feature:1458470-1458597:-1:exon
so has part: feature:1452707-1452761:-1:exon
so has part: feature:1446912-1446980:-1:exon
so has part: feature:1446324-1446476:-1:exon
so has part: feature:1443893-1444064:-1:exon
so has part: feature:1442380-1442449:-1:exon
so has part: feature:1439926-1440070:-1:exon
so has part: feature:1436454-1436664:-1:exon
so has part: feature:1430603-1433337:-1:exon

position:1483318:-1
position: 1483318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1483283-1483318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1478089-1478178:-1:exon

position:1478178:-1
position: 1478178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1473429-1473471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1470987-1471050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466224-1466335:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1465191-1465263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1464891-1464944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1458470-1458597:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1452707-1452761:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1446912-1446980:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1446324-1446476:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1443893-1444064:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1442380-1442449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1439926-1440070:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1436454-1436664:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1430603-1433337:-1:exon

bbs4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: bbs4
product: Bardet-Biedl syndrome 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038784371.1
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(1430603..1433337,1436454..1436664,1439926..1440070,1442380..1442449,1443893..1444064,1446324..1446476,1446912..1446980,1452707..1452761,1458470..1458597,1464891..1464944,1465191..1465263,1466224..1466335,1470987..1471050,1471596..1471675,1473429..1473471,1478089..1478178,1483283..1483316))
location: region:1430603-1483316:-1
so has part: feature:1483283-1483316:-1:exon
so has part: feature:1478089-1478178:-1:exon
so has part: feature:1473429-1473471:-1:exon
so has part: feature:1471596-1471675:-1:exon
so has part: feature:1470987-1471050:-1:exon
so has part: feature:1466224-1466335:-1:exon
so has part: feature:1465191-1465263:-1:exon
so has part: feature:1464891-1464944:-1:exon
so has part: feature:1458470-1458597:-1:exon
so has part: feature:1452707-1452761:-1:exon
so has part: feature:1446912-1446980:-1:exon
so has part: feature:1446324-1446476:-1:exon
so has part: feature:1443893-1444064:-1:exon
so has part: feature:1442380-1442449:-1:exon
so has part: feature:1439926-1440070:-1:exon
so has part: feature:1436454-1436664:-1:exon
so has part: feature:1430603-1433337:-1:exon

position:1483316:-1
position: 1483316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1483283-1483316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1478089-1478178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1473429-1473471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1471596-1471675:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1470987-1471050:-1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:1458470-1458597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1452707-1452761:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1446912-1446980:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1446324-1446476:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1443893-1444064:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1442380-1442449:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1439926-1440070:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1436454-1436664:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1430603-1433337:-1:exon

bbs4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: bbs4
product: Bardet-Biedl syndrome 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038784375.1
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(1430603..1433337,1436454..1436664,1439926..1440070,1442380..1442449,1443893..1444064,1446324..1446476,1446912..1446980,1452707..1452761,1458470..1458597,1464891..1464944,1465191..1465263,1466224..1466335,1470987..1471050,1473429..1473517,1478089..1478161))
location: region:1430603-1478161:-1
so has part: feature:1478089-1478161:-1:exon
so has part: feature:1473429-1473517:-1:exon
so has part: feature:1470987-1471050:-1:exon
so has part: feature:1466224-1466335:-1:exon
so has part: feature:1465191-1465263:-1:exon
so has part: feature:1464891-1464944:-1:exon
so has part: feature:1458470-1458597:-1:exon
so has part: feature:1452707-1452761:-1:exon
so has part: feature:1446912-1446980:-1:exon
so has part: feature:1446324-1446476:-1:exon
so has part: feature:1443893-1444064:-1:exon
so has part: feature:1442380-1442449:-1:exon
so has part: feature:1439926-1440070:-1:exon
so has part: feature:1436454-1436664:-1:exon
so has part: feature:1430603-1433337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1478089-1478161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1473429-1473517:-1:exon

position:1473517:-1
position: 1473517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1470987-1471050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466224-1466335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1465191-1465263:-1:exon

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SIO_000300: 6
SIO_000628: feature:1464891-1464944:-1:exon

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SIO_000300: 7
SIO_000628: feature:1458470-1458597:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1452707-1452761:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1446912-1446980:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1446324-1446476:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1443893-1444064:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1442380-1442449:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1439926-1440070:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1436454-1436664:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1430603-1433337:-1:exon

bbs4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: bbs4
product: Bardet-Biedl syndrome 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_038784373.1
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(1430603..1433337,1436454..1436664,1439926..1440070,1442380..1442449,1443893..1444064,1446324..1446476,1446912..1446980,1452707..1452761,1458470..1458597,1464891..1464944,1465191..1465263,1466224..1466335,1470987..1471050,1471596..1471675,1473429..1473517,1478089..1478161))
location: region:1430603-1478161:-1
so has part: feature:1478089-1478161:-1:exon
so has part: feature:1473429-1473517:-1:exon
so has part: feature:1471596-1471675:-1:exon
so has part: feature:1470987-1471050:-1:exon
so has part: feature:1466224-1466335:-1:exon
so has part: feature:1465191-1465263:-1:exon
so has part: feature:1464891-1464944:-1:exon
so has part: feature:1458470-1458597:-1:exon
so has part: feature:1452707-1452761:-1:exon
so has part: feature:1446912-1446980:-1:exon
so has part: feature:1446324-1446476:-1:exon
so has part: feature:1443893-1444064:-1:exon
so has part: feature:1442380-1442449:-1:exon
so has part: feature:1439926-1440070:-1:exon
so has part: feature:1436454-1436664:-1:exon
so has part: feature:1430603-1433337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1478089-1478161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1473429-1473517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1471596-1471675:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1470987-1471050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466224-1466335:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1465191-1465263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1464891-1464944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1458470-1458597:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1452707-1452761:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1446912-1446980:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1446324-1446476:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1443893-1444064:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1442380-1442449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1439926-1440070:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1436454-1436664:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1430603-1433337:-1:exon

bbs4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: bbs4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Bardet-Biedl syndrome 4 protein isoform X1
translation: MFGAEGGNGGNDGAGTQRIEYRCDHQLLPTQFVRRWRNRPCNVLMFENHNHGKAIIKEQLQETQGMCEYAVYVQALIFRLEGKIQESLELFQTCAILNPQNVDNLKQVARSLFLLGKHKAATEVYSEAAKLNEKDWEISHNLGVCFMHLKNFEKAKEYLSCALQTSRHDLTFIVLGKLHLLEGNTQKAIETYKRAVEFSPENAELLTTLGLLYLQLGMYQKAFEHLGNALTYNPNNYKAILAAGSMMQTHSDFDVALSKYRIAAHAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQHASAFHFLSAAINIQPRMGELYMLLAVTLTNLADPDNAKRAYERAVSLEQLNPLVNLNYSILLYNQGDRKGALNQYQEMEKKVSKLKASSDVLEFDPELVDMAQKIGAALQVGENLVWTKPTKDSKLRERPAASGKSSANQQPLGSNKALGQAMSSAAGYSKTMQLSAGGFPSRVPKPPSLPLEPEASADPDTEDLNRKQELR
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(1433231..1433337,1436454..1436664,1439926..1440070,1442380..1442449,1443893..1444064,1446324..1446476,1446912..1446980,1452707..1452761,1458470..1458597,1464891..1464944,1465191..1465263,1466224..1466335,1470987..1471050,1473429..1473471,1478089..1478161,1483283..1483325))
location: region:1433231-1483325:-1
so has part: feature:1483283-1483325:-1:exon
so has part: feature:1478089-1478161:-1:exon
so has part: feature:1473429-1473471:-1:exon
so has part: feature:1470987-1471050:-1:exon
so has part: feature:1466224-1466335:-1:exon
so has part: feature:1465191-1465263:-1:exon
so has part: feature:1464891-1464944:-1:exon
so has part: feature:1458470-1458597:-1:exon
so has part: feature:1452707-1452761:-1:exon
so has part: feature:1446912-1446980:-1:exon
so has part: feature:1446324-1446476:-1:exon
so has part: feature:1443893-1444064:-1:exon
so has part: feature:1442380-1442449:-1:exon
so has part: feature:1439926-1440070:-1:exon
so has part: feature:1436454-1436664:-1:exon
so has part: feature:1433231-1433337:-1:exon

XP_038640296.1
type: Protein
SIO_000068: ncbiprotein

position:1433231:-1
position: 1433231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1483325:-1
position: 1483325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1483283-1483325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1478089-1478161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1473429-1473471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1470987-1471050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466224-1466335:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1465191-1465263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1464891-1464944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1458470-1458597:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1452707-1452761:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1446912-1446980:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1446324-1446476:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1443893-1444064:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1442380-1442449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1439926-1440070:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1436454-1436664:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1433231-1433337:-1:exon

bbs4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: bbs4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Bardet-Biedl syndrome 4 protein isoform X4
translation: MAGTQRIEYRCDHQLLPTQFVRRWRNRPCNVLMFENHNHGKAIIKEQLQETQGMCEYAVYVQALIFRLEGKIQESLELFQTCAILNPQNVDNLKQVARSLFLLGKHKAATEVYSEAAKLNEKDWEISHNLGVCFMHLKNFEKAKEYLSCALQTSRHDLTFIVLGKLHLLEGNTQKAIETYKRAVEFSPENAELLTTLGLLYLQLGMYQKAFEHLGNALTYNPNNYKAILAAGSMMQTHSDFDVALSKYRIAAHAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQHASAFHFLSAAINIQPRMGELYMLLAVTLTNLADPDNAKRAYERAVSLEQLNPLVNLNYSILLYNQGDRKGALNQYQEMEKKVSKLKASSDVLEFDPELVDMAQKIGAALQVGENLVWTKPTKDSKLRERPAASGKSSANQQPLGSNKALGQAMSSAAGYSKTMQLSAGGFPSRVPKPPSLPLEPEASADPDTEDLNRKQELR
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(1433231..1433337,1436454..1436664,1439926..1440070,1442380..1442449,1443893..1444064,1446324..1446476,1446912..1446980,1452707..1452761,1458470..1458597,1464891..1464944,1465191..1465263,1466224..1466335,1470987..1471050,1473429..1473471,1478089..1478168))
location: region:1433231-1478168:-1
so has part: feature:1478089-1478168:-1:exon
so has part: feature:1473429-1473471:-1:exon
so has part: feature:1470987-1471050:-1:exon
so has part: feature:1466224-1466335:-1:exon
so has part: feature:1465191-1465263:-1:exon
so has part: feature:1464891-1464944:-1:exon
so has part: feature:1458470-1458597:-1:exon
so has part: feature:1452707-1452761:-1:exon
so has part: feature:1446912-1446980:-1:exon
so has part: feature:1446324-1446476:-1:exon
so has part: feature:1443893-1444064:-1:exon
so has part: feature:1442380-1442449:-1:exon
so has part: feature:1439926-1440070:-1:exon
so has part: feature:1436454-1436664:-1:exon
so has part: feature:1433231-1433337:-1:exon

XP_038640300.1
type: Protein
SIO_000068: ncbiprotein

position:1478168:-1
position: 1478168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1478089-1478168:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1473429-1473471:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1470987-1471050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466224-1466335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1465191-1465263:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1464891-1464944:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1458470-1458597:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1452707-1452761:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1446912-1446980:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1446324-1446476:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1443893-1444064:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1442380-1442449:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1439926-1440070:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1436454-1436664:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1433231-1433337:-1:exon

bbs4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: bbs4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Bardet-Biedl syndrome 4 protein isoform X3
translation: MAESTMQRSDVRKSQSRKVPELPILERRNWLIHLHYIRKDYETCKAIIKEQLQETQGMCEYAVYVQALIFRLEGKIQESLELFQTCAILNPQNVDNLKQVARSLFLLGKHKAATEVYSEAAKLNEKDWEISHNLGVCFMHLKNFEKAKEYLSCALQTSRHDLTFIVLGKLHLLEGNTQKAIETYKRAVEFSPENAELLTTLGLLYLQLGMYQKAFEHLGNALTYNPNNYKAILAAGSMMQTHSDFDVALSKYRIAAHAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQHASAFHFLSAAINIQPRMGELYMLLAVTLTNLADPDNAKRAYERAVSLEQLNPLVNLNYSILLYNQGDRKGALNQYQEMEKKVSKLKASSDVLEFDPELVDMAQKIGAALQVGENLVWTKPTKDSKLRERPAASGKSSANQQPLGSNKALGQAMSSAAGYSKTMQLSAGGFPSRVPKPPSLPLEPEASADPDTEDLNRKQELR
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(1433231..1433337,1436454..1436664,1439926..1440070,1442380..1442449,1443893..1444064,1446324..1446476,1446912..1446980,1452707..1452761,1458470..1458597,1464891..1464944,1465191..1465263,1466224..1466335,1470987..1471050,1471596..1471675,1473429..1473471,1478089..1478100))
location: region:1433231-1478100:-1
so has part: feature:1478089-1478100:-1:exon
so has part: feature:1473429-1473471:-1:exon
so has part: feature:1471596-1471675:-1:exon
so has part: feature:1470987-1471050:-1:exon
so has part: feature:1466224-1466335:-1:exon
so has part: feature:1465191-1465263:-1:exon
so has part: feature:1464891-1464944:-1:exon
so has part: feature:1458470-1458597:-1:exon
so has part: feature:1452707-1452761:-1:exon
so has part: feature:1446912-1446980:-1:exon
so has part: feature:1446324-1446476:-1:exon
so has part: feature:1443893-1444064:-1:exon
so has part: feature:1442380-1442449:-1:exon
so has part: feature:1439926-1440070:-1:exon
so has part: feature:1436454-1436664:-1:exon
so has part: feature:1433231-1433337:-1:exon

XP_038640298.1
type: Protein
SIO_000068: ncbiprotein

position:1478100:-1
position: 1478100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1478089-1478100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1473429-1473471:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1471596-1471675:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1470987-1471050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466224-1466335:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1465191-1465263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1464891-1464944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1458470-1458597:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1452707-1452761:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1446912-1446980:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1446324-1446476:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1443893-1444064:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1442380-1442449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1439926-1440070:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1436454-1436664:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1433231-1433337:-1:exon

bbs4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: bbs4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Bardet-Biedl syndrome 4 protein isoform X3
translation: MAESTMQRSDVRKSQSRKVPELPILERRNWLIHLHYIRKDYETCKAIIKEQLQETQGMCEYAVYVQALIFRLEGKIQESLELFQTCAILNPQNVDNLKQVARSLFLLGKHKAATEVYSEAAKLNEKDWEISHNLGVCFMHLKNFEKAKEYLSCALQTSRHDLTFIVLGKLHLLEGNTQKAIETYKRAVEFSPENAELLTTLGLLYLQLGMYQKAFEHLGNALTYNPNNYKAILAAGSMMQTHSDFDVALSKYRIAAHAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQHASAFHFLSAAINIQPRMGELYMLLAVTLTNLADPDNAKRAYERAVSLEQLNPLVNLNYSILLYNQGDRKGALNQYQEMEKKVSKLKASSDVLEFDPELVDMAQKIGAALQVGENLVWTKPTKDSKLRERPAASGKSSANQQPLGSNKALGQAMSSAAGYSKTMQLSAGGFPSRVPKPPSLPLEPEASADPDTEDLNRKQELR
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(1433231..1433337,1436454..1436664,1439926..1440070,1442380..1442449,1443893..1444064,1446324..1446476,1446912..1446980,1452707..1452761,1458470..1458597,1464891..1464944,1465191..1465263,1466224..1466335,1470987..1471050,1471596..1471675,1473429..1473471,1478089..1478100))
location: region:1433231-1478100:-1
so has part: feature:1478089-1478100:-1:exon
so has part: feature:1473429-1473471:-1:exon
so has part: feature:1471596-1471675:-1:exon
so has part: feature:1470987-1471050:-1:exon
so has part: feature:1466224-1466335:-1:exon
so has part: feature:1465191-1465263:-1:exon
so has part: feature:1464891-1464944:-1:exon
so has part: feature:1458470-1458597:-1:exon
so has part: feature:1452707-1452761:-1:exon
so has part: feature:1446912-1446980:-1:exon
so has part: feature:1446324-1446476:-1:exon
so has part: feature:1443893-1444064:-1:exon
so has part: feature:1442380-1442449:-1:exon
so has part: feature:1439926-1440070:-1:exon
so has part: feature:1436454-1436664:-1:exon
so has part: feature:1433231-1433337:-1:exon

XP_038640299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1478089-1478100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1473429-1473471:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1471596-1471675:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1470987-1471050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466224-1466335:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1465191-1465263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1464891-1464944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1458470-1458597:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1452707-1452761:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1446912-1446980:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1446324-1446476:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1443893-1444064:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1442380-1442449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1439926-1440070:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1436454-1436664:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1433231-1433337:-1:exon

bbs4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: bbs4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Bardet-Biedl syndrome 4 protein isoform X2
translation: MVWPKKTMQRSDVRKSQSRKVPELPILERRNWLIHLHYIRKDYETCKAIIKEQLQETQGMCEYAVYVQALIFRLEGKIQESLELFQTCAILNPQNVDNLKQVARSLFLLGKHKAATEVYSEAAKLNEKDWEISHNLGVCFMHLKNFEKAKEYLSCALQTSRHDLTFIVLGKLHLLEGNTQKAIETYKRAVEFSPENAELLTTLGLLYLQLGMYQKAFEHLGNALTYNPNNYKAILAAGSMMQTHSDFDVALSKYRIAAHAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQHASAFHFLSAAINIQPRMGELYMLLAVTLTNLADPDNAKRAYERAVSLEQLNPLVNLNYSILLYNQGDRKGALNQYQEMEKKVSKLKASSDVLEFDPELVDMAQKIGAALQVGENLVWTKPTKDSKLRERPAASGKSSANQQPLGSNKALGQAMSSAAGYSKTMQLSAGGFPSRVPKPPSLPLEPEASADPDTEDLNRKQELR
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(1433231..1433337,1436454..1436664,1439926..1440070,1442380..1442449,1443893..1444064,1446324..1446476,1446912..1446980,1452707..1452761,1458470..1458597,1464891..1464944,1465191..1465263,1466224..1466335,1470987..1471050,1471596..1471675,1473429..1473471,1476747..1476764))
location: region:1433231-1476764:-1
so has part: feature:1476747-1476764:-1:exon
so has part: feature:1473429-1473471:-1:exon
so has part: feature:1471596-1471675:-1:exon
so has part: feature:1470987-1471050:-1:exon
so has part: feature:1466224-1466335:-1:exon
so has part: feature:1465191-1465263:-1:exon
so has part: feature:1464891-1464944:-1:exon
so has part: feature:1458470-1458597:-1:exon
so has part: feature:1452707-1452761:-1:exon
so has part: feature:1446912-1446980:-1:exon
so has part: feature:1446324-1446476:-1:exon
so has part: feature:1443893-1444064:-1:exon
so has part: feature:1442380-1442449:-1:exon
so has part: feature:1439926-1440070:-1:exon
so has part: feature:1436454-1436664:-1:exon
so has part: feature:1433231-1433337:-1:exon

XP_038640297.1
type: Protein
SIO_000068: ncbiprotein

position:1476764:-1
position: 1476764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1476747-1476764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1473429-1473471:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1471596-1471675:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1470987-1471050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466224-1466335:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1465191-1465263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1464891-1464944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1458470-1458597:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1452707-1452761:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1446912-1446980:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1446324-1446476:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1443893-1444064:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1442380-1442449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1439926-1440070:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1436454-1436664:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1433231-1433337:-1:exon

bbs4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: bbs4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Bardet-Biedl syndrome 4 protein isoform X5
translation: MQRSDVRKSQSRKVPELPILERRNWLIHLHYIRKDYETCKAIIKEQLQETQGMCEYAVYVQALIFRLEGKIQESLELFQTCAILNPQNVDNLKQVARSLFLLGKHKAATEVYSEAAKLNEKDWEISHNLGVCFMHLKNFEKAKEYLSCALQTSRHDLTFIVLGKLHLLEGNTQKAIETYKRAVEFSPENAELLTTLGLLYLQLGMYQKAFEHLGNALTYNPNNYKAILAAGSMMQTHSDFDVALSKYRIAAHAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQHASAFHFLSAAINIQPRMGELYMLLAVTLTNLADPDNAKRAYERAVSLEQLNPLVNLNYSILLYNQGDRKGALNQYQEMEKKVSKLKASSDVLEFDPELVDMAQKIGAALQVGENLVWTKPTKDSKLRERPAASGKSSANQQPLGSNKALGQAMSSAAGYSKTMQLSAGGFPSRVPKPPSLPLEPEASADPDTEDLNRKQELR
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(1433231..1433337,1436454..1436664,1439926..1440070,1442380..1442449,1443893..1444064,1446324..1446476,1446912..1446980,1452707..1452761,1458470..1458597,1464891..1464944,1465191..1465263,1466224..1466335,1470987..1471050,1471596..1471675,1473429..1473468))
location: region:1433231-1473468:-1
so has part: feature:1473429-1473468:-1:exon
so has part: feature:1471596-1471675:-1:exon
so has part: feature:1470987-1471050:-1:exon
so has part: feature:1466224-1466335:-1:exon
so has part: feature:1465191-1465263:-1:exon
so has part: feature:1464891-1464944:-1:exon
so has part: feature:1458470-1458597:-1:exon
so has part: feature:1452707-1452761:-1:exon
so has part: feature:1446912-1446980:-1:exon
so has part: feature:1446324-1446476:-1:exon
so has part: feature:1443893-1444064:-1:exon
so has part: feature:1442380-1442449:-1:exon
so has part: feature:1439926-1440070:-1:exon
so has part: feature:1436454-1436664:-1:exon
so has part: feature:1433231-1433337:-1:exon

XP_038640301.1
type: Protein
SIO_000068: ncbiprotein

position:1473468:-1
position: 1473468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1473429-1473468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1471596-1471675:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1470987-1471050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466224-1466335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1465191-1465263:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1464891-1464944:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1458470-1458597:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1452707-1452761:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1446912-1446980:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1446324-1446476:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1443893-1444064:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1442380-1442449:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1439926-1440070:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1436454-1436664:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1433231-1433337:-1:exon

bbs4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: bbs4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Bardet-Biedl syndrome 4 protein isoform X6
translation: MFENHNHGKAIIKEQLQETQGMCEYAVYVQALIFRLEGKIQESLELFQTCAILNPQNVDNLKQVARSLFLLGKHKAATEVYSEAAKLNEKDWEISHNLGVCFMHLKNFEKAKEYLSCALQTSRHDLTFIVLGKLHLLEGNTQKAIETYKRAVEFSPENAELLTTLGLLYLQLGMYQKAFEHLGNALTYNPNNYKAILAAGSMMQTHSDFDVALSKYRIAAHAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQHASAFHFLSAAINIQPRMGELYMLLAVTLTNLADPDNAKRAYERAVSLEQLNPLVNLNYSILLYNQGDRKGALNQYQEMEKKVSKLKASSDVLEFDPELVDMAQKIGAALQVGENLVWTKPTKDSKLRERPAASGKSSANQQPLGSNKALGQAMSSAAGYSKTMQLSAGGFPSRVPKPPSLPLEPEASADPDTEDLNRKQELR
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(1433231..1433337,1436454..1436664,1439926..1440070,1442380..1442449,1443893..1444064,1446324..1446476,1446912..1446980,1452707..1452761,1458470..1458597,1464891..1464944,1465191..1465263,1466224..1466335,1470987..1471050,1473429..1473455))
location: region:1433231-1473455:-1
so has part: feature:1473429-1473455:-1:exon
so has part: feature:1470987-1471050:-1:exon
so has part: feature:1466224-1466335:-1:exon
so has part: feature:1465191-1465263:-1:exon
so has part: feature:1464891-1464944:-1:exon
so has part: feature:1458470-1458597:-1:exon
so has part: feature:1452707-1452761:-1:exon
so has part: feature:1446912-1446980:-1:exon
so has part: feature:1446324-1446476:-1:exon
so has part: feature:1443893-1444064:-1:exon
so has part: feature:1442380-1442449:-1:exon
so has part: feature:1439926-1440070:-1:exon
so has part: feature:1436454-1436664:-1:exon
so has part: feature:1433231-1433337:-1:exon

XP_038640302.1
type: Protein
SIO_000068: ncbiprotein

position:1473455:-1
position: 1473455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1473429-1473455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1470987-1471050:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1466224-1466335:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1465191-1465263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1464891-1464944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1458470-1458597:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1452707-1452761:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1446912-1446980:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1446324-1446476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1443893-1444064:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1442380-1442449:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1439926-1440070:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1436454-1436664:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1433231-1433337:-1:exon

bbs4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: bbs4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Bardet-Biedl syndrome 4 protein isoform X6
translation: MFENHNHGKAIIKEQLQETQGMCEYAVYVQALIFRLEGKIQESLELFQTCAILNPQNVDNLKQVARSLFLLGKHKAATEVYSEAAKLNEKDWEISHNLGVCFMHLKNFEKAKEYLSCALQTSRHDLTFIVLGKLHLLEGNTQKAIETYKRAVEFSPENAELLTTLGLLYLQLGMYQKAFEHLGNALTYNPNNYKAILAAGSMMQTHSDFDVALSKYRIAAHAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQHASAFHFLSAAINIQPRMGELYMLLAVTLTNLADPDNAKRAYERAVSLEQLNPLVNLNYSILLYNQGDRKGALNQYQEMEKKVSKLKASSDVLEFDPELVDMAQKIGAALQVGENLVWTKPTKDSKLRERPAASGKSSANQQPLGSNKALGQAMSSAAGYSKTMQLSAGGFPSRVPKPPSLPLEPEASADPDTEDLNRKQELR
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(1433231..1433337,1436454..1436664,1439926..1440070,1442380..1442449,1443893..1444064,1446324..1446476,1446912..1446980,1452707..1452761,1458470..1458597,1464891..1464944,1465191..1465263,1466224..1466335,1470987..1471050,1473429..1473455))
location: region:1433231-1473455:-1
so has part: feature:1473429-1473455:-1:exon
so has part: feature:1470987-1471050:-1:exon
so has part: feature:1466224-1466335:-1:exon
so has part: feature:1465191-1465263:-1:exon
so has part: feature:1464891-1464944:-1:exon
so has part: feature:1458470-1458597:-1:exon
so has part: feature:1452707-1452761:-1:exon
so has part: feature:1446912-1446980:-1:exon
so has part: feature:1446324-1446476:-1:exon
so has part: feature:1443893-1444064:-1:exon
so has part: feature:1442380-1442449:-1:exon
so has part: feature:1439926-1440070:-1:exon
so has part: feature:1436454-1436664:-1:exon
so has part: feature:1433231-1433337:-1:exon

XP_038640303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1473429-1473455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1470987-1471050:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1466224-1466335:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1465191-1465263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1464891-1464944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1458470-1458597:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1452707-1452761:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1446912-1446980:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1446324-1446476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1443893-1444064:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1442380-1442449:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1439926-1440070:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1436454-1436664:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1433231-1433337:-1:exon

LOC119956752
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1493142..1571835)
location: region:1493142-1571835:-1
so has part: feature:1493142-1571835:-1:exon
subclass of: SO_0000010

119956752
type: Gene
SIO_000068: ncbigene

position:1493142:-1
position: 1493142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1571835:-1
position: 1571835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1493142-1571835:-1:exon

LOC119956752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956752
product: E3 ubiquitin-protein ligase ARIH1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_038784106.1
SIO_010081: LOC119956752
subclass of: SO_0000673
so part of: LOC119956752
location: complement(join(1493142..1495823,1499007..1499119,1505338..1505598,1507353..1507410,1509108..1509238,1512155..1512226,1513926..1513968,1514091..1514197,1514563..1514629,1525752..1525807,1525903..1525995,1552905..1552967,1556044..1556188,1560342..1560409,1571336..1571835))
location: region:1493142-1571835:-1
so has part: feature:1571336-1571835:-1:exon
so has part: feature:1560342-1560409:-1:exon
so has part: feature:1556044-1556188:-1:exon
so has part: feature:1552905-1552967:-1:exon
so has part: feature:1525903-1525995:-1:exon
so has part: feature:1525752-1525807:-1:exon
so has part: feature:1514563-1514629:-1:exon
so has part: feature:1514091-1514197:-1:exon
so has part: feature:1513926-1513968:-1:exon
so has part: feature:1512155-1512226:-1:exon
so has part: feature:1509108-1509238:-1:exon
so has part: feature:1507353-1507410:-1:exon
so has part: feature:1505338-1505598:-1:exon
so has part: feature:1499007-1499119:-1:exon
so has part: feature:1493142-1495823:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1571336-1571835:-1:exon

position:1571336:-1
position: 1571336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1560342-1560409:-1:exon

position:1560342:-1
position: 1560342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1560409:-1
position: 1560409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1556044-1556188:-1:exon

position:1556044:-1
position: 1556044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1556188:-1
position: 1556188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1552905-1552967:-1:exon

position:1552905:-1
position: 1552905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1552967:-1
position: 1552967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1525903-1525995:-1:exon

position:1525903:-1
position: 1525903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1525995:-1
position: 1525995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1525752-1525807:-1:exon

position:1525752:-1
position: 1525752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1525807:-1
position: 1525807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1514563-1514629:-1:exon

position:1514563:-1
position: 1514563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514629:-1
position: 1514629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1514091-1514197:-1:exon

position:1514091:-1
position: 1514091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514197:-1
position: 1514197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1513926-1513968:-1:exon

position:1513926:-1
position: 1513926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1513968:-1
position: 1513968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1512155-1512226:-1:exon

position:1512155:-1
position: 1512155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1512226:-1
position: 1512226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1509108-1509238:-1:exon

position:1509108:-1
position: 1509108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1509238:-1
position: 1509238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1507353-1507410:-1:exon

position:1507353:-1
position: 1507353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1507410:-1
position: 1507410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1505338-1505598:-1:exon

position:1505338:-1
position: 1505338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1505598:-1
position: 1505598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1499007-1499119:-1:exon

position:1499007:-1
position: 1499007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499119:-1
position: 1499119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1493142-1495823:-1:exon

position:1495823:-1
position: 1495823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119956752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956752
product: E3 ubiquitin-protein ligase ARIH1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_038784107.1
SIO_010081: LOC119956752
subclass of: SO_0000673
so part of: LOC119956752
location: complement(join(1493142..1495823,1499007..1499119,1505338..1505598,1507353..1507410,1509108..1509238,1512155..1512226,1513926..1513968,1514091..1514197,1514563..1514629,1525752..1525807,1525903..1525995,1556044..1556188,1560342..1560409,1571336..1571833))
location: region:1493142-1571833:-1
so has part: feature:1571336-1571833:-1:exon
so has part: feature:1560342-1560409:-1:exon
so has part: feature:1556044-1556188:-1:exon
so has part: feature:1525903-1525995:-1:exon
so has part: feature:1525752-1525807:-1:exon
so has part: feature:1514563-1514629:-1:exon
so has part: feature:1514091-1514197:-1:exon
so has part: feature:1513926-1513968:-1:exon
so has part: feature:1512155-1512226:-1:exon
so has part: feature:1509108-1509238:-1:exon
so has part: feature:1507353-1507410:-1:exon
so has part: feature:1505338-1505598:-1:exon
so has part: feature:1499007-1499119:-1:exon
so has part: feature:1493142-1495823:-1:exon

position:1571833:-1
position: 1571833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1571336-1571833:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560342-1560409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556044-1556188:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1525903-1525995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1525752-1525807:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1514563-1514629:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1514091-1514197:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1513926-1513968:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1512155-1512226:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1509108-1509238:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1507353-1507410:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1505338-1505598:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1499007-1499119:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1493142-1495823:-1:exon

LOC119956752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase ARIH1 isoform X2
translation: MDSDEGYMYDEDEYSEESEPEDNFEIGEVEMQEPGLEPGQDGDGVGGGGGGGLGGLGGLGGLGAEQEEEDYRYEVLSADQIVQHMVECIREVNEVIENPATITRILLSHFNWDKEKLMERYFDGNLEKLFAECHVVNPYKKSRTRQMNTRSSSQDMVCAICYLNYPNSYFTGLECGHKFCMQCWNEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVIKVQYPDAKPVRCKCGRQFCFNCAENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMYTYVFAFYLRKNNQSIIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRKVLLQHVHEGYEKDLWEYIED
SIO_010081: LOC119956752
subclass of: SO_0000673
so part of: LOC119956752
location: complement(join(1495739..1495823,1499007..1499119,1505338..1505598,1507353..1507410,1509108..1509238,1512155..1512226,1513926..1513968,1514091..1514197,1514563..1514629,1525752..1525807,1525903..1525995,1556044..1556188,1560342..1560409,1571336..1571626))
location: region:1495739-1571626:-1
so has part: feature:1571336-1571626:-1:exon
so has part: feature:1560342-1560409:-1:exon
so has part: feature:1556044-1556188:-1:exon
so has part: feature:1525903-1525995:-1:exon
so has part: feature:1525752-1525807:-1:exon
so has part: feature:1514563-1514629:-1:exon
so has part: feature:1514091-1514197:-1:exon
so has part: feature:1513926-1513968:-1:exon
so has part: feature:1512155-1512226:-1:exon
so has part: feature:1509108-1509238:-1:exon
so has part: feature:1507353-1507410:-1:exon
so has part: feature:1505338-1505598:-1:exon
so has part: feature:1499007-1499119:-1:exon
so has part: feature:1495739-1495823:-1:exon

XP_038640035.1
type: Protein
SIO_000068: ncbiprotein

position:1495739:-1
position: 1495739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1571626:-1
position: 1571626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1571336-1571626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560342-1560409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556044-1556188:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1525903-1525995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1525752-1525807:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1514563-1514629:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1514091-1514197:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1513926-1513968:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1512155-1512226:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1509108-1509238:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1507353-1507410:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1505338-1505598:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1499007-1499119:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1495739-1495823:-1:exon

LOC119956752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase arih1 isoform X1
translation: MDSDEGYMYDEDEYSEESEPEDNFEIGEVEMQEPGLEPGQDGDGVGGGGGGGLGGLGGLGGLGAEQEEEDYRYEVLSADQIVQHMVECIREVNEVIENPATITRILLSHFNWDKEKLMERYFDGNLEKLFAECHVVNPYKKSRTRQMNTRSSSQDMVCAICYLNYPNSKEESGGSGSTTRITNSVSDCQYFTGLECGHKFCMQCWNEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVIKVQYPDAKPVRCKCGRQFCFNCAENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMYTYVFAFYLRKNNQSIIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRKVLLQHVHEGYEKDLWEYIED
SIO_010081: LOC119956752
subclass of: SO_0000673
so part of: LOC119956752
location: complement(join(1495739..1495823,1499007..1499119,1505338..1505598,1507353..1507410,1509108..1509238,1512155..1512226,1513926..1513968,1514091..1514197,1514563..1514629,1525752..1525807,1525903..1525995,1552905..1552967,1556044..1556188,1560342..1560409,1571336..1571626))
location: region:1495739-1571626:-1
so has part: feature:1571336-1571626:-1:exon
so has part: feature:1560342-1560409:-1:exon
so has part: feature:1556044-1556188:-1:exon
so has part: feature:1552905-1552967:-1:exon
so has part: feature:1525903-1525995:-1:exon
so has part: feature:1525752-1525807:-1:exon
so has part: feature:1514563-1514629:-1:exon
so has part: feature:1514091-1514197:-1:exon
so has part: feature:1513926-1513968:-1:exon
so has part: feature:1512155-1512226:-1:exon
so has part: feature:1509108-1509238:-1:exon
so has part: feature:1507353-1507410:-1:exon
so has part: feature:1505338-1505598:-1:exon
so has part: feature:1499007-1499119:-1:exon
so has part: feature:1495739-1495823:-1:exon

XP_038640034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1571336-1571626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560342-1560409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556044-1556188:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1552905-1552967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1525903-1525995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525752-1525807:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1514563-1514629:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1514091-1514197:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1513926-1513968:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1512155-1512226:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1509108-1509238:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1507353-1507410:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1505338-1505598:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1499007-1499119:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1495739-1495823:-1:exon

LOC119956875
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1598142..1692638
location: region:1598142-1692638:1
so has part: feature:1598142-1692638:1:exon
subclass of: SO_0000010

119956875
type: Gene
SIO_000068: ncbigene

position:1598142:1
position: 1598142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692638:1
position: 1692638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1598142-1692638:1:exon

LOC119956875
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956875
product: chondroitin sulfate proteoglycan 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038784414.1
SIO_010081: LOC119956875
subclass of: SO_0000673
so part of: LOC119956875
location: join(1598142..1598269,1636529..1636692,1644992..1648549,1661262..1661720,1662428..1662604,1675898..1676096,1684068..1684199,1684796..1684959,1687078..1687261,1689476..1692638)
location: region:1598142-1692638:1
so has part: feature:1598142-1598269:1:exon
so has part: feature:1636529-1636692:1:exon
so has part: feature:1644992-1648549:1:exon
so has part: feature:1661262-1661720:1:exon
so has part: feature:1662428-1662604:1:exon
so has part: feature:1675898-1676096:1:exon
so has part: feature:1684068-1684199:1:exon
so has part: feature:1684796-1684959:1:exon
so has part: feature:1687078-1687261:1:exon
so has part: feature:1689476-1692638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1598142-1598269:1:exon

position:1598269:1
position: 1598269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1636529-1636692:1:exon

position:1636529:1
position: 1636529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1636692:1
position: 1636692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1644992-1648549:1:exon

position:1644992:1
position: 1644992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648549:1
position: 1648549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1661262-1661720:1:exon

position:1661262:1
position: 1661262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1661720:1
position: 1661720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1662428-1662604:1:exon

position:1662428:1
position: 1662428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1662604:1
position: 1662604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1675898-1676096:1:exon

position:1675898:1
position: 1675898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1676096:1
position: 1676096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1684068-1684199:1:exon

position:1684068:1
position: 1684068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684199:1
position: 1684199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1684796-1684959:1:exon

position:1684796:1
position: 1684796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684959:1
position: 1684959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1687078-1687261:1:exon

position:1687078:1
position: 1687078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1687261:1
position: 1687261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1689476-1692638:1:exon

position:1689476:1
position: 1689476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119956875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondroitin sulfate proteoglycan 4-like
translation: MAAMRGSVILATSSMLYLLPILLSGMALTSAVSFFGDSYMEVREFGAFSTSRLSMKFLTRRQNGLLFLASGHSDYLLMELYAGALQVKLELGSGEVILHSQTGLKLNNLVWHDVSLVHENKTLSLTVDELFTTSVEVPGQLNKLNIDNGLYVGGPGEVKIPYLSRQSSYFRGCISKAEFNDYDILSSLASLPGYRTVYAIEDRCSDVIVAEDNYPINFLGPKSYISFPSWNARQEGIFECFVKTMVQQAPLLYHAGWQTDFIVLEIADGHVRVLLDNGSGIVVLDNTRFVSDGKWHSVKLLFNMKHVQVKVDDELSQKQLIDNKKTHLELRGHMFIGGINNETSLELIKRGLSYVLVERTVTGSFIGCIQNIQVNLEKKSLADALVTKGIDTVCEDEEGEGMEEGKNKLEDEISATPIPRFLEVLRTNAPCLLSKNLSKVFSNFTRLLDLMPLIVNEAGISTLEPNHIHPTIDLSKIGVRNSQVLFKIIQDARHGHLELNIPGAKNRKAFTLLDVIHHHITYQHDGSEESLDQLIFDVSVRSKQEIPDCLRQGQRYVFSIKITPINDPPELIFPNGNIMMILKNTWKTLGPDVIRIVDADNVCSELKMMIVNKEDPGYVEDVRNPGQRVGEFSCQDLRVGNIRYIHSGAKVSELLLQVSDGERISDPTPLRIVALKPDVQVGNNTGLILSQGGVSLITISNLSVETNAVRQKVDILYNITEQLYYGEVQNRDNNGEWKPVKIFHQDDIEHSRLRYFSTDPEFRKGDITEKLEFAVTVGQKIIENNIFFIKIKRAKITLARISPNELNNVRRGKITQNELEAAIEGHTIPTDLFRYVVLKSPGKGKLLVRGEELNEGSTFTQEDLKQVGLTYVATVRNAEETQDSFQFQVHVGDQHSPVYTYPILIGIDPEVPILMSKALVVVEGGTQTITKDQLFTIGQGTASFVYNVTQGPQHGQLVMQTDPEKPVTIFTNDDILQERLMYKHDDSETLEDKIVFVVVEQSEDVEPKADVILGKLSISIRPTNDQPPVRVVNKTFNVTLNGQHLLTTTELHFHDADSDFDDSQLIYTKWGISNGNIVSARDTAHELSRFSQDDMEMKRVLFKHHGARRGTFQLQVSDGVHQTMTVLEVHALDPYLRIINNSMFLVHQGQEALILGHLLSVESNMDIWSEQEIVYQVTFPPSHGEILVNGELDHSFSQKDINDGLVVYHNDNSKYSRDSFDFTVEVKGIKAHGTFPILIYMESHQYSLIVVHNEKLIVHQGGAKKIWDEQLLVFHNNSVPADLIYSVKAAPLRGRLVMVTESMAGPQESLKSFSQDDINGGRVQYVNSRFSPQGDLFILDVSNGFKTVDGLTVLVKLIPDVIILVTQNFSVSESGAHTINGDILNISNYQPSSNFEFYVTKAPKHGRIGHHRLPEDNVSSFTMEEVKQEAVFYFHDGSETLMDIFTLMANISEIGKESKPIPVTVTVIPVNDQAPAVTINSQLEMWEDSNAEISQDLLSAEDADSPAEELVYSIRAPSNGHVALKSSLGDSILEFSQAQINNGQISFVHHGPLSGGFSFVVSDGVNRGSAQLFRVSARRLDILIEKEETLVIYPGTRQPITSRHLKARTSDNSNRPITYTVVTAPAMGQLIQVQGRNVTRKVSNFTQRDLEAENIFYQHNRPKEPFWKSQDSFQFTASSPPVVTGRQNLTLCITFENHRPELGTQLWHNKGLVLPEGQSAAIDQTMLDASNLLASVPKPQQSTYDVIFEVTSQPRHGFLSIANVGNVHHFTQSDLFDSALRYTHNRPGSSADSFVFRVWSSPRRKTFSHPADDGSIIVISELFNVTLVPVKDHPPRIVTPALTLQVLQGSSTQLTQDHMNTVDFDNSPEEMLYSVVRGPDNGFFVNRVNDSTAIKQFTQADINTGRVLFKATGPAASSMLQFSVSDGKHSALEGFVTIEVTPVTVNMIHNKEIVLVQGNASVPLTREELLIGTKENNVILYKITQQPVYGEIIRNQSVVT…
SIO_010081: LOC119956875
subclass of: SO_0000673
so part of: LOC119956875
location: join(1598176..1598269,1636529..1636692,1644992..1648549,1661262..1661720,1662428..1662604,1675898..1676096,1684068..1684199,1684796..1684959,1687078..1687261,1689476..1691388)
location: region:1598176-1691388:1
so has part: feature:1598176-1598269:1:exon
so has part: feature:1636529-1636692:1:exon
so has part: feature:1644992-1648549:1:exon
so has part: feature:1661262-1661720:1:exon
so has part: feature:1662428-1662604:1:exon
so has part: feature:1675898-1676096:1:exon
so has part: feature:1684068-1684199:1:exon
so has part: feature:1684796-1684959:1:exon
so has part: feature:1687078-1687261:1:exon
so has part: feature:1689476-1691388:1:exon

XP_038640342.1
type: Protein
SIO_000068: ncbiprotein

position:1598176:1
position: 1598176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1691388:1
position: 1691388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1598176-1598269:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1636529-1636692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1644992-1648549:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1661262-1661720:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1662428-1662604:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1675898-1676096:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1684068-1684199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1684796-1684959:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1687078-1687261:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1689476-1691388:1:exon

snx33
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: snx33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1744864..1746749)
location: region:1744864-1746749:-1
so has part: feature:1744864-1746749:-1:exon
subclass of: SO_0000010

119956924
type: Gene
SIO_000068: ncbigene

position:1744864:-1
position: 1744864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1746749:-1
position: 1746749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1744864-1746749:-1:exon

snx33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: snx33
product: sorting nexin 33
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038784494.1
SIO_010081: snx33
subclass of: SO_0000673
so part of: snx33
location: complement(1744864..1746749)
location: region:1744864-1746749:-1
so has part: feature:1744864-1746749:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1744864-1746749:-1:exon

snx33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: snx33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-33
translation: MASIKAKALYSFQSENPEEINIQENEQLLVFNEKSLDGWLEGQNSRGDKGLFPASYVEILKPSTPSPQTSNSSFTYYSSPASSPGNHSVFYSPTSPPPYQQGSYEEDDDDDWDDWDDSSTVVDEPGVTGNTNGHNHLHSYTASAYPSVTYRQKPSVERQDSTASRLSTKSSVVGKNFNRFSSFVRSGGEAFILGEVPSVFKTAETYCVLMSPDGPEWSDSPHPFTCTIEEPTKQTKFKGIKSYISYKLTPSHTKYPVYRRYKHFDWLHNRLLHKFSVISVPHLPEKQATGRFEDDFIEKRKRRLILWMDHMTSHPVLSQYEGFQHFLTCTDDRAWKQGKRRSEKDELVGANSFLTIQIPQEHQDLQDVEERVDMFKTFSKRMDDSVLQLTNVATDLCRKHAGGFRKEFQKLGNAFNSISQAFELDQPHLAIPLNKAISNTGKTYEAIGELFAEQPKNDLFHMLDTLSLYQGLLSNFPDILHVQKGKLTSQL
SIO_010081: snx33
subclass of: SO_0000673
so part of: snx33
location: complement(1744962..1746437)
location: region:1744962-1746437:-1
so has part: feature:1744962-1746437:-1:exon

XP_038640422.1
type: Protein
SIO_000068: ncbiprotein

position:1744962:-1
position: 1744962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1746437:-1
position: 1746437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1744962-1746437:-1:exon

LOC119956766
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956766
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1763589..1801317
location: region:1763589-1801317:1
so has part: feature:1763589-1801317:1:exon
subclass of: SO_0000010

119956766
type: Gene
SIO_000068: ncbigene

position:1763589:1
position: 1763589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1801317:1
position: 1801317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1763589-1801317:1:exon

LOC119956766
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956766
product: sorting nexin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_038784146.1
SIO_010081: LOC119956766
subclass of: SO_0000673
so part of: LOC119956766
location: join(1763589..1763740,1773997..1774096,1775574..1775701,1776939..1777014,1780887..1780930,1781246..1781387,1782161..1782239,1788579..1788654,1790237..1790350,1792339..1792432,1795235..1795440,1796480..1796623,1797484..1797564,1797655..1797726,1799457..1801317)
location: region:1763589-1801317:1
so has part: feature:1763589-1763740:1:exon
so has part: feature:1773997-1774096:1:exon
so has part: feature:1775574-1775701:1:exon
so has part: feature:1776939-1777014:1:exon
so has part: feature:1780887-1780930:1:exon
so has part: feature:1781246-1781387:1:exon
so has part: feature:1782161-1782239:1:exon
so has part: feature:1788579-1788654:1:exon
so has part: feature:1790237-1790350:1:exon
so has part: feature:1792339-1792432:1:exon
so has part: feature:1795235-1795440:1:exon
so has part: feature:1796480-1796623:1:exon
so has part: feature:1797484-1797564:1:exon
so has part: feature:1797655-1797726:1:exon
so has part: feature:1799457-1801317:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1763589-1763740:1:exon

position:1763740:1
position: 1763740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1773997-1774096:1:exon

position:1773997:1
position: 1773997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1774096:1
position: 1774096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1775574-1775701:1:exon

position:1775574:1
position: 1775574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1775701:1
position: 1775701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1776939-1777014:1:exon

position:1776939:1
position: 1776939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1777014:1
position: 1777014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1780887-1780930:1:exon

position:1780887:1
position: 1780887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1780930:1
position: 1780930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1781246-1781387:1:exon

position:1781246:1
position: 1781246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1781387:1
position: 1781387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1782161-1782239:1:exon

position:1782161:1
position: 1782161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1782239:1
position: 1782239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1788579-1788654:1:exon

position:1788579:1
position: 1788579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1788654:1
position: 1788654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1790237-1790350:1:exon

position:1790237:1
position: 1790237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1790350:1
position: 1790350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1792339-1792432:1:exon

position:1792339:1
position: 1792339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1792432:1
position: 1792432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1795235-1795440:1:exon

position:1795235:1
position: 1795235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1795440:1
position: 1795440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1796480-1796623:1:exon

position:1796480:1
position: 1796480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1796623:1
position: 1796623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1797484-1797564:1:exon

position:1797484:1
position: 1797484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1797564:1
position: 1797564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1797655-1797726:1:exon

position:1797655:1
position: 1797655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1797726:1
position: 1797726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1799457-1801317:1:exon

position:1799457:1
position: 1799457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119956766
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956766
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-1-like
translation: MAAELRPPLMLESETETEGETEGEDIFTGSTTPSEMDSTKTPCSNSKTNGIHSDNDDEQDIFAEATVELSLDSPQNDNQTKQSAADVTVTVPPSAAIQSQIKRYQELEEEVVDEDEDQFDMKVTVTEPEKVGDGMAAYMAYKVSTLTSLSMFKRKDFSVRRRFSDFLGLYDRLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLERRRAALERYLQRIIKHPTLLQDPDVREFLEKDELPRAVNTQALSGASLLRMVNKAADAVSKMTIKMNESDIWFEEKFQEIENEDQQLRKLHAVVETLVNHRKELAMNTAIFAKSAAMLGSSEDHTALSRALSQLAEVEEKIEQLYHDQANNDFFLFAELLSDYIRLISAVRGVFDQRMKSWQRWQDAQTTLQKKRENEARLIWANKPDKLQQAKDEIAEWEPKVLQYEREFERISVTIRKEVARFEKEQIKDFKSRIIVYLETLQNSQQQLIKYWEAFLPEAKAIA
SIO_010081: LOC119956766
subclass of: SO_0000673
so part of: LOC119956766
location: join(1763651..1763740,1773997..1774096,1775574..1775701,1776939..1777014,1780887..1780930,1781246..1781387,1782161..1782239,1788579..1788654,1790237..1790350,1792339..1792432,1795235..1795440,1796480..1796623,1797484..1797564,1797655..1797726,1799457..1799507)
location: region:1763651-1799507:1
so has part: feature:1763651-1763740:1:exon
so has part: feature:1773997-1774096:1:exon
so has part: feature:1775574-1775701:1:exon
so has part: feature:1776939-1777014:1:exon
so has part: feature:1780887-1780930:1:exon
so has part: feature:1781246-1781387:1:exon
so has part: feature:1782161-1782239:1:exon
so has part: feature:1788579-1788654:1:exon
so has part: feature:1790237-1790350:1:exon
so has part: feature:1792339-1792432:1:exon
so has part: feature:1795235-1795440:1:exon
so has part: feature:1796480-1796623:1:exon
so has part: feature:1797484-1797564:1:exon
so has part: feature:1797655-1797726:1:exon
so has part: feature:1799457-1799507:1:exon

XP_038640074.1
type: Protein
SIO_000068: ncbiprotein

position:1763651:1
position: 1763651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1799507:1
position: 1799507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1763651-1763740:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1773997-1774096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1775574-1775701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1776939-1777014:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1780887-1780930:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1781246-1781387:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1782161-1782239:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1788579-1788654:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1790237-1790350:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1792339-1792432:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1795235-1795440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1796480-1796623:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1797484-1797564:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1797655-1797726:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1799457-1799507:1:exon

LOC119956930
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956930
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1820991..1831266
location: region:1820991-1831266:1
so has part: feature:1820991-1831266:1:exon
subclass of: SO_0000010

119956930
type: Gene
SIO_000068: ncbigene

position:1820991:1
position: 1820991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1831266:1
position: 1831266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1820991-1831266:1:exon

LOC119956930
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956930
product: sorting nexin-24-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_038784512.1
SIO_010081: LOC119956930
subclass of: SO_0000673
so part of: LOC119956930
location: join(1820991..1821146,1824390..1824475,1826359..1826391,1829474..1829535,1831077..1831266)
location: region:1820991-1831266:1
so has part: feature:1820991-1821146:1:exon
so has part: feature:1824390-1824475:1:exon
so has part: feature:1826359-1826391:1:exon
so has part: feature:1829474-1829535:1:exon
so has part: feature:1831077-1831266:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1820991-1821146:1:exon

position:1821146:1
position: 1821146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1824390-1824475:1:exon

position:1824390:1
position: 1824390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1824475:1
position: 1824475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1826359-1826391:1:exon

position:1826359:1
position: 1826359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1826391:1
position: 1826391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1829474-1829535:1:exon

position:1829474:1
position: 1829474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1829535:1
position: 1829535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1831077-1831266:1:exon

position:1831077:1
position: 1831077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119956930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956930
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-24-like
translation: MTKTPDFPAKRGLNRRPKALEQKRTGLEAYLQGLVCDDQHLSQEILDFLNIRHIPAGKQMSVLEQLDLQNYRCFCHEVIMFSKDAFAHPDTEDLLPNVIVMGVLQGFYLTDPETCNEVASVGTDRLHIPGPESIV
SIO_010081: LOC119956930
subclass of: SO_0000673
so part of: LOC119956930
location: join(1821051..1821146,1824390..1824475,1826359..1826391,1829474..1829535,1831077..1831207)
location: region:1821051-1831207:1
so has part: feature:1821051-1821146:1:exon
so has part: feature:1824390-1824475:1:exon
so has part: feature:1826359-1826391:1:exon
so has part: feature:1829474-1829535:1:exon
so has part: feature:1831077-1831207:1:exon

XP_038640440.1
type: Protein
SIO_000068: ncbiprotein

position:1821051:1
position: 1821051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1831207:1
position: 1831207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1821051-1821146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1824390-1824475:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1826359-1826391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1829474-1829535:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1831077-1831207:1:exon

LOC119956828
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1971695..2477048)
location: region:1971695-2477048:-1
so has part: feature:1971695-2477048:-1:exon
subclass of: SO_0000010

119956828
type: Gene
SIO_000068: ncbigene

position:1971695:-1
position: 1971695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2477048:-1
position: 2477048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1971695-2477048:-1:exon

LOC119956828
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956828
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038784291.1
SIO_010081: LOC119956828
subclass of: SO_0000673
so part of: LOC119956828
location: complement(join(1971695..1973886,2133162..2133243,2271390..2271457,2421908..2422090,2476523..2477048))
location: region:1971695-2477048:-1
so has part: feature:2476523-2477048:-1:exon
so has part: feature:2421908-2422090:-1:exon
so has part: feature:2271390-2271457:-1:exon
so has part: feature:2133162-2133243:-1:exon
so has part: feature:1971695-1973886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2476523-2477048:-1:exon

position:2476523:-1
position: 2476523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2421908-2422090:-1:exon

position:2421908:-1
position: 2421908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2422090:-1
position: 2422090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2271390-2271457:-1:exon

position:2271390:-1
position: 2271390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2271457:-1
position: 2271457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2133162-2133243:-1:exon

position:2133162:-1
position: 2133162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2133243:-1
position: 2133243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1971695-1973886:-1:exon

position:1973886:-1
position: 1973886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119956828
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956828
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038784292.1
SIO_010081: LOC119956828
subclass of: SO_0000673
so part of: LOC119956828
location: complement(join(1971695..1973886,2133162..2133243,2472046..2472065))
location: region:1971695-2472065:-1
so has part: feature:2472046-2472065:-1:exon
so has part: feature:2133162-2133243:-1:exon
so has part: feature:1971695-1973886:-1:exon

position:2472065:-1
position: 2472065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2472046-2472065:-1:exon

position:2472046:-1
position: 2472046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2133162-2133243:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1971695-1973886:-1:exon

LOC119956828
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956828
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038784294.1
SIO_010081: LOC119956828
subclass of: SO_0000673
so part of: LOC119956828
location: complement(join(1971695..1973886,2133162..2133243,2205552..2205570))
location: region:1971695-2205570:-1
so has part: feature:2205552-2205570:-1:exon
so has part: feature:2133162-2133243:-1:exon
so has part: feature:1971695-1973886:-1:exon

position:2205570:-1
position: 2205570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2205552-2205570:-1:exon

position:2205552:-1
position: 2205552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2133162-2133243:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1971695-1973886:-1:exon

LOC119956828
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956828
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038784295.1
SIO_010081: LOC119956828
subclass of: SO_0000673
so part of: LOC119956828
location: complement(join(1971695..1973886,2083174..2083589))
location: region:1971695-2083589:-1
so has part: feature:2083174-2083589:-1:exon
so has part: feature:1971695-1973886:-1:exon

position:2083589:-1
position: 2083589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2083174-2083589:-1:exon

position:2083174:-1
position: 2083174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1971695-1973886:-1:exon

LOC119956828
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956828
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_038784298.1
SIO_010081: LOC119956828
subclass of: SO_0000673
so part of: LOC119956828
location: complement(join(1971695..1973886,2035245..2035267))
location: region:1971695-2035267:-1
so has part: feature:2035245-2035267:-1:exon
so has part: feature:1971695-1973886:-1:exon

position:2035267:-1
position: 2035267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2035245-2035267:-1:exon

position:2035245:-1
position: 2035245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1971695-1973886:-1:exon

LOC119956828
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956828
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038784297.1
SIO_010081: LOC119956828
subclass of: SO_0000673
so part of: LOC119956828
location: complement(join(1971695..1973886,1994178..1994225))
location: region:1971695-1994225:-1
so has part: feature:1994178-1994225:-1:exon
so has part: feature:1971695-1973886:-1:exon

position:1994225:-1
position: 1994225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1994178-1994225:-1:exon

position:1994178:-1
position: 1994178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1971695-1973886:-1:exon

LOC119956828
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956828
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038784296.1
SIO_010081: LOC119956828
subclass of: SO_0000673
so part of: LOC119956828
location: complement(join(1971695..1973886,1980357..1980593))
location: region:1971695-1980593:-1
so has part: feature:1980357-1980593:-1:exon
so has part: feature:1971695-1973886:-1:exon

position:1980593:-1
position: 1980593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1980357-1980593:-1:exon

position:1980357:-1
position: 1980357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1971695-1973886:-1:exon

LOC119956828
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
translation: MLPGEVSMQSSCQACWQPILLLILAAVLSGHATGCPARCDCSAQERSVVCHRKRFITVPEGIPTETRLLDLSKNRIKTINQDEFVAYPLLEVLELNENIISTVEPGAFSNLFNLRALGLRSNRLKLIPLGVFTGLNNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVYISHRAFSGLHSLEQLTLDKCNLTSIPTEALSHLHGLLVLRLRFLNINVIQNYSFKRLYRLKVLEISHWPFLDTMAANCLYGLNLTSLTITSCNLTSVPYIAIRHLVYLKFLNLSFNPITTVQGHMMQELLRLQQIYLAGGQLLTIEPYAFRGLNHLRLLNVSSNYLTTLEETVFHSVGNLETLIMDNNPLACDCRLLWIFRRRWRLNFNRQQPVCSTPEIVQGKEFKDFPDVLLPSYFTCRRARIRDKKPQRIHVDEGHTVHFVCRADGDPPPAIVWVSPRKRHISSKSNGRLTVFPDGTLEVRYAQLQDNGSYQCIAMNAGGNDSTSASLYVRGYSPEWGQQPNKTFAFITNQPNDSNANSTRASVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGIGTADAPRKFNMKMI
SIO_010081: LOC119956828
subclass of: SO_0000673
so part of: LOC119956828
location: complement(1972033..1973874)
location: region:1972033-1973874:-1
so has part: feature:1972033-1973874:-1:exon

XP_038640219.1
type: Protein
SIO_000068: ncbiprotein

position:1972033:-1
position: 1972033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1973874:-1
position: 1973874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1972033-1973874:-1:exon

LOC119956828
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
translation: MLPGEVSMQSSCQACWQPILLLILAAVLSGHATGCPARCDCSAQERSVVCHRKRFITVPEGIPTETRLLDLSKNRIKTINQDEFVAYPLLEVLELNENIISTVEPGAFSNLFNLRALGLRSNRLKLIPLGVFTGLNNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVYISHRAFSGLHSLEQLTLDKCNLTSIPTEALSHLHGLLVLRLRFLNINVIQNYSFKRLYRLKVLEISHWPFLDTMAANCLYGLNLTSLTITSCNLTSVPYIAIRHLVYLKFLNLSFNPITTVQGHMMQELLRLQQIYLAGGQLLTIEPYAFRGLNHLRLLNVSSNYLTTLEETVFHSVGNLETLIMDNNPLACDCRLLWIFRRRWRLNFNRQQPVCSTPEIVQGKEFKDFPDVLLPSYFTCRRARIRDKKPQRIHVDEGHTVHFVCRADGDPPPAIVWVSPRKRHISSKSNGRLTVFPDGTLEVRYAQLQDNGSYQCIAMNAGGNDSTSASLYVRGYSPEWGQQPNKTFAFITNQPNDSNANSTRASVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGIGTADAPRKFNMKMI
SIO_010081: LOC119956828
subclass of: SO_0000673
so part of: LOC119956828
location: complement(1972033..1973874)
location: region:1972033-1973874:-1
so has part: feature:1972033-1973874:-1:exon

XP_038640220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1972033-1973874:-1:exon

LOC119956828
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
translation: MLPGEVSMQSSCQACWQPILLLILAAVLSGHATGCPARCDCSAQERSVVCHRKRFITVPEGIPTETRLLDLSKNRIKTINQDEFVAYPLLEVLELNENIISTVEPGAFSNLFNLRALGLRSNRLKLIPLGVFTGLNNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVYISHRAFSGLHSLEQLTLDKCNLTSIPTEALSHLHGLLVLRLRFLNINVIQNYSFKRLYRLKVLEISHWPFLDTMAANCLYGLNLTSLTITSCNLTSVPYIAIRHLVYLKFLNLSFNPITTVQGHMMQELLRLQQIYLAGGQLLTIEPYAFRGLNHLRLLNVSSNYLTTLEETVFHSVGNLETLIMDNNPLACDCRLLWIFRRRWRLNFNRQQPVCSTPEIVQGKEFKDFPDVLLPSYFTCRRARIRDKKPQRIHVDEGHTVHFVCRADGDPPPAIVWVSPRKRHISSKSNGRLTVFPDGTLEVRYAQLQDNGSYQCIAMNAGGNDSTSASLYVRGYSPEWGQQPNKTFAFITNQPNDSNANSTRASVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGIGTADAPRKFNMKMI
SIO_010081: LOC119956828
subclass of: SO_0000673
so part of: LOC119956828
location: complement(1972033..1973874)
location: region:1972033-1973874:-1
so has part: feature:1972033-1973874:-1:exon

XP_038640222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1972033-1973874:-1:exon

LOC119956828
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
translation: MLPGEVSMQSSCQACWQPILLLILAAVLSGHATGCPARCDCSAQERSVVCHRKRFITVPEGIPTETRLLDLSKNRIKTINQDEFVAYPLLEVLELNENIISTVEPGAFSNLFNLRALGLRSNRLKLIPLGVFTGLNNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVYISHRAFSGLHSLEQLTLDKCNLTSIPTEALSHLHGLLVLRLRFLNINVIQNYSFKRLYRLKVLEISHWPFLDTMAANCLYGLNLTSLTITSCNLTSVPYIAIRHLVYLKFLNLSFNPITTVQGHMMQELLRLQQIYLAGGQLLTIEPYAFRGLNHLRLLNVSSNYLTTLEETVFHSVGNLETLIMDNNPLACDCRLLWIFRRRWRLNFNRQQPVCSTPEIVQGKEFKDFPDVLLPSYFTCRRARIRDKKPQRIHVDEGHTVHFVCRADGDPPPAIVWVSPRKRHISSKSNGRLTVFPDGTLEVRYAQLQDNGSYQCIAMNAGGNDSTSASLYVRGYSPEWGQQPNKTFAFITNQPNDSNANSTRASVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGIGTADAPRKFNMKMI
SIO_010081: LOC119956828
subclass of: SO_0000673
so part of: LOC119956828
location: complement(1972033..1973874)
location: region:1972033-1973874:-1
so has part: feature:1972033-1973874:-1:exon

XP_038640223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1972033-1973874:-1:exon

LOC119956828
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
translation: MLPGEVSMQSSCQACWQPILLLILAAVLSGHATGCPARCDCSAQERSVVCHRKRFITVPEGIPTETRLLDLSKNRIKTINQDEFVAYPLLEVLELNENIISTVEPGAFSNLFNLRALGLRSNRLKLIPLGVFTGLNNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVYISHRAFSGLHSLEQLTLDKCNLTSIPTEALSHLHGLLVLRLRFLNINVIQNYSFKRLYRLKVLEISHWPFLDTMAANCLYGLNLTSLTITSCNLTSVPYIAIRHLVYLKFLNLSFNPITTVQGHMMQELLRLQQIYLAGGQLLTIEPYAFRGLNHLRLLNVSSNYLTTLEETVFHSVGNLETLIMDNNPLACDCRLLWIFRRRWRLNFNRQQPVCSTPEIVQGKEFKDFPDVLLPSYFTCRRARIRDKKPQRIHVDEGHTVHFVCRADGDPPPAIVWVSPRKRHISSKSNGRLTVFPDGTLEVRYAQLQDNGSYQCIAMNAGGNDSTSASLYVRGYSPEWGQQPNKTFAFITNQPNDSNANSTRASVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGIGTADAPRKFNMKMI
SIO_010081: LOC119956828
subclass of: SO_0000673
so part of: LOC119956828
location: complement(1972033..1973874)
location: region:1972033-1973874:-1
so has part: feature:1972033-1973874:-1:exon

XP_038640224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1972033-1973874:-1:exon

LOC119956828
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
translation: MLPGEVSMQSSCQACWQPILLLILAAVLSGHATGCPARCDCSAQERSVVCHRKRFITVPEGIPTETRLLDLSKNRIKTINQDEFVAYPLLEVLELNENIISTVEPGAFSNLFNLRALGLRSNRLKLIPLGVFTGLNNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVYISHRAFSGLHSLEQLTLDKCNLTSIPTEALSHLHGLLVLRLRFLNINVIQNYSFKRLYRLKVLEISHWPFLDTMAANCLYGLNLTSLTITSCNLTSVPYIAIRHLVYLKFLNLSFNPITTVQGHMMQELLRLQQIYLAGGQLLTIEPYAFRGLNHLRLLNVSSNYLTTLEETVFHSVGNLETLIMDNNPLACDCRLLWIFRRRWRLNFNRQQPVCSTPEIVQGKEFKDFPDVLLPSYFTCRRARIRDKKPQRIHVDEGHTVHFVCRADGDPPPAIVWVSPRKRHISSKSNGRLTVFPDGTLEVRYAQLQDNGSYQCIAMNAGGNDSTSASLYVRGYSPEWGQQPNKTFAFITNQPNDSNANSTRASVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGIGTADAPRKFNMKMI
SIO_010081: LOC119956828
subclass of: SO_0000673
so part of: LOC119956828
location: complement(1972033..1973874)
location: region:1972033-1973874:-1
so has part: feature:1972033-1973874:-1:exon

XP_038640225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1972033-1973874:-1:exon

LOC119956828
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
translation: MLPGEVSMQSSCQACWQPILLLILAAVLSGHATGCPARCDCSAQERSVVCHRKRFITVPEGIPTETRLLDLSKNRIKTINQDEFVAYPLLEVLELNENIISTVEPGAFSNLFNLRALGLRSNRLKLIPLGVFTGLNNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVYISHRAFSGLHSLEQLTLDKCNLTSIPTEALSHLHGLLVLRLRFLNINVIQNYSFKRLYRLKVLEISHWPFLDTMAANCLYGLNLTSLTITSCNLTSVPYIAIRHLVYLKFLNLSFNPITTVQGHMMQELLRLQQIYLAGGQLLTIEPYAFRGLNHLRLLNVSSNYLTTLEETVFHSVGNLETLIMDNNPLACDCRLLWIFRRRWRLNFNRQQPVCSTPEIVQGKEFKDFPDVLLPSYFTCRRARIRDKKPQRIHVDEGHTVHFVCRADGDPPPAIVWVSPRKRHISSKSNGRLTVFPDGTLEVRYAQLQDNGSYQCIAMNAGGNDSTSASLYVRGYSPEWGQQPNKTFAFITNQPNDSNANSTRASVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGIGTADAPRKFNMKMI
SIO_010081: LOC119956828
subclass of: SO_0000673
so part of: LOC119956828
location: complement(1972033..1973874)
location: region:1972033-1973874:-1
so has part: feature:1972033-1973874:-1:exon

XP_038640226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1972033-1973874:-1:exon

LOC119956891
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956891
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2905601..2911204)
location: region:2905601-2911204:-1
so has part: feature:2905601-2911204:-1:exon
subclass of: SO_0000011

119956891
type: Gene
SIO_000068: ncbigene

position:2905601:-1
position: 2905601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2911204:-1
position: 2911204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2905601-2911204:-1:exon

LOC119956891
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7830
nc RNA class: lncRNA
gene: LOC119956891
product: uncharacterized LOC119956891
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005458700.1
SIO_010081: LOC119956891
subclass of: SO_0000673
so part of: LOC119956891
location: complement(join(2905601..2906922,2908986..2909317,2910934..2911204))
location: region:2905601-2911204:-1
so has part: feature:2910934-2911204:-1:exon
so has part: feature:2908986-2909317:-1:exon
so has part: feature:2905601-2906922:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2910934-2911204:-1:exon

position:2910934:-1
position: 2910934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2908986-2909317:-1:exon

position:2908986:-1
position: 2908986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2909317:-1
position: 2909317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2905601-2906922:-1:exon

position:2906922:-1
position: 2906922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

nr2e3
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: nr2e3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2946346..2960831
location: region:2946346-2960831:1
so has part: feature:2946346-2960831:1:exon
subclass of: SO_0000010

119956878
type: Gene
SIO_000068: ncbigene

position:2946346:1
position: 2946346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2960831:1
position: 2960831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2946346-2960831:1:exon

nr2e3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: nr2e3
product: nuclear receptor subfamily 2, group E, member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_038784418.1
SIO_010081: nr2e3
subclass of: SO_0000673
so part of: nr2e3
location: join(2946346..2946712,2950155..2950305,2951530..2951633,2951812..2952054,2952919..2953103,2954789..2955029,2958759..2958864,2960344..2960831)
location: region:2946346-2960831:1
so has part: feature:2946346-2946712:1:exon
so has part: feature:2950155-2950305:1:exon
so has part: feature:2951530-2951633:1:exon
so has part: feature:2951812-2952054:1:exon
so has part: feature:2952919-2953103:1:exon
so has part: feature:2954789-2955029:1:exon
so has part: feature:2958759-2958864:1:exon
so has part: feature:2960344-2960831:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2946346-2946712:1:exon

position:2946712:1
position: 2946712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2950155-2950305:1:exon

position:2950155:1
position: 2950155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2950305:1
position: 2950305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2951530-2951633:1:exon

position:2951530:1
position: 2951530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2951633:1
position: 2951633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2951812-2952054:1:exon

position:2951812:1
position: 2951812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2952054:1
position: 2952054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2952919-2953103:1:exon

position:2952919:1
position: 2952919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2953103:1
position: 2953103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2954789-2955029:1:exon

position:2954789:1
position: 2954789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2955029:1
position: 2955029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2958759-2958864:1:exon

position:2958759:1
position: 2958759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2958864:1
position: 2958864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2960344-2960831:1:exon

position:2960344:1
position: 2960344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nr2e3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: nr2e3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: photoreceptor-specific nuclear receptor isoform X1
translation: MSSSPIESSVSPGLEDSQTVKTPSPGKSLSPVLMCKVCGDTSSGKHYGIYACNGCSGFFKRSVRRKLIYRCQAGTGMCPVDKAHRNQCQACRLKKCLQAGMNKDAVQNERQPRSTAQVRVDTAELDPDKEHIATTREATVSSASTQGSASSNISSNQRPISPPNNHRFMASLMTAETCAKLEPEDVDENIDVTSNEPERTSATEYQMSIYPPSSPECVYETSARLLFMAVKWAKNLPIFSNLPFRDQVILLEEAWNELFLLCAIQWSMPLESCPLLSLPELSHSPQGKSSSTMADVRILQEIMSRFKVIAVDPTEFACLKAVVLFKPETRGLKDPEQVENLQDQSQVMLGQHSRTHYPIQPVRFGKLLLLLPSLRFVPSEQIELLFFHRTIGNTPMEKLLCDMFKS
SIO_010081: nr2e3
subclass of: SO_0000673
so part of: nr2e3
location: join(2946655..2946712,2950155..2950305,2951530..2951633,2951812..2952054,2952919..2953103,2954789..2955029,2958759..2958864,2960344..2960476)
location: region:2946655-2960476:1
so has part: feature:2946655-2946712:1:exon
so has part: feature:2950155-2950305:1:exon
so has part: feature:2951530-2951633:1:exon
so has part: feature:2951812-2952054:1:exon
so has part: feature:2952919-2953103:1:exon
so has part: feature:2954789-2955029:1:exon
so has part: feature:2958759-2958864:1:exon
so has part: feature:2960344-2960476:1:exon

XP_038640346.1
type: Protein
SIO_000068: ncbiprotein

position:2946655:1
position: 2946655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2960476:1
position: 2960476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2946655-2946712:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2950155-2950305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2951530-2951633:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2951812-2952054:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2952919-2953103:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2954789-2955029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2958759-2958864:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2960344-2960476:1:exon

nr2e3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: nr2e3
product: nuclear receptor subfamily 2, group E, member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038784419.1
SIO_010081: nr2e3
subclass of: SO_0000673
so part of: nr2e3
location: join(2948538..2948796,2950155..2950305,2951530..2951633,2951812..2952054,2952919..2953103,2954789..2955029,2958759..2958864,2960344..2960831)
location: region:2948538-2960831:1
so has part: feature:2948538-2948796:1:exon
so has part: feature:2950155-2950305:1:exon
so has part: feature:2951530-2951633:1:exon
so has part: feature:2951812-2952054:1:exon
so has part: feature:2952919-2953103:1:exon
so has part: feature:2954789-2955029:1:exon
so has part: feature:2958759-2958864:1:exon
so has part: feature:2960344-2960831:1:exon

position:2948538:1
position: 2948538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2948538-2948796:1:exon

position:2948796:1
position: 2948796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2950155-2950305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2951530-2951633:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2951812-2952054:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2952919-2953103:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2954789-2955029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2958759-2958864:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2960344-2960831:1:exon

nr2e3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: nr2e3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: photoreceptor-specific nuclear receptor isoform X2
translation: MKTPSPGKSLSPVLMCKVCGDTSSGKHYGIYACNGCSGFFKRSVRRKLIYRCQAGTGMCPVDKAHRNQCQACRLKKCLQAGMNKDAVQNERQPRSTAQVRVDTAELDPDKEHIATTREATVSSASTQGSASSNISSNQRPISPPNNHRFMASLMTAETCAKLEPEDVDENIDVTSNEPERTSATEYQMSIYPPSSPECVYETSARLLFMAVKWAKNLPIFSNLPFRDQVILLEEAWNELFLLCAIQWSMPLESCPLLSLPELSHSPQGKSSSTMADVRILQEIMSRFKVIAVDPTEFACLKAVVLFKPETRGLKDPEQVENLQDQSQVMLGQHSRTHYPIQPVRFGKLLLLLPSLRFVPSEQIELLFFHRTIGNTPMEKLLCDMFKS
SIO_010081: nr2e3
subclass of: SO_0000673
so part of: nr2e3
location: join(2948796,2950155..2950305,2951530..2951633,2951812..2952054,2952919..2953103,2954789..2955029,2958759..2958864,2960344..2960476)
location: region:2948796-2960476:1
so has part: feature:2948796-2948796:1:exon
so has part: feature:2950155-2950305:1:exon
so has part: feature:2951530-2951633:1:exon
so has part: feature:2951812-2952054:1:exon
so has part: feature:2952919-2953103:1:exon
so has part: feature:2954789-2955029:1:exon
so has part: feature:2958759-2958864:1:exon
so has part: feature:2960344-2960476:1:exon

XP_038640347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2948796-2948796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2950155-2950305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2951530-2951633:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2951812-2952054:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2952919-2953103:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2954789-2955029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2958759-2958864:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2960344-2960476:1:exon

myo9aa
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: myo9aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2968217..3219462)
location: region:2968217-3219462:-1
so has part: feature:2968217-3219462:-1:exon
subclass of: SO_0000010

119956776
type: Gene
SIO_000068: ncbigene

position:2968217:-1
position: 2968217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3219462:-1
position: 3219462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2968217-3219462:-1:exon

myo9aa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: myo9aa
product: myosin IXAa, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_038784181.1
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
location: complement(join(2968217..2971935,2972907..2973049,2974704..2974906,2984253..2984376,2985218..2985349,2986176..2986281,2987713..2987841,2988530..2988722,2989485..2989546,2990058..2990169,2992114..2992161,2998113..2998301,2998462..2998578,3001145..3001374,3002465..3002673,3006935..3007041,3016519..3016731,3017566..3017668,3023021..3024757,3025098..3025402,3027186..3027335,3028424..3028546,3029580..3029690,3031565..3031645,3033355..3033477,3040222..3040261,3041641..3041784,3053928..3054003,3056436..3056555,3061155..3061350,3063465..3063606,3069187..3069308,3094523..3094657,3095626..3095742,3101267..3101356,3102190..3102316,3105395..3105492,3110636..3110692,3113535..3113634,3117308..3117370,3125742..3125836,3218556..3219462))
location: region:2968217-3219462:-1
so has part: feature:3218556-3219462:-1:exon
so has part: feature:3125742-3125836:-1:exon
so has part: feature:3117308-3117370:-1:exon
so has part: feature:3113535-3113634:-1:exon
so has part: feature:3110636-3110692:-1:exon
so has part: feature:3105395-3105492:-1:exon
so has part: feature:3102190-3102316:-1:exon
so has part: feature:3101267-3101356:-1:exon
so has part: feature:3095626-3095742:-1:exon
so has part: feature:3094523-3094657:-1:exon
so has part: feature:3069187-3069308:-1:exon
so has part: feature:3063465-3063606:-1:exon
so has part: feature:3061155-3061350:-1:exon
so has part: feature:3056436-3056555:-1:exon
so has part: feature:3053928-3054003:-1:exon
so has part: feature:3041641-3041784:-1:exon
so has part: feature:3040222-3040261:-1:exon
so has part: feature:3033355-3033477:-1:exon
so has part: feature:3031565-3031645:-1:exon
so has part: feature:3029580-3029690:-1:exon
so has part: feature:3028424-3028546:-1:exon
so has part: feature:3027186-3027335:-1:exon
so has part: feature:3025098-3025402:-1:exon
so has part: feature:3023021-3024757:-1:exon
so has part: feature:3017566-3017668:-1:exon
so has part: feature:3016519-3016731:-1:exon
so has part: feature:3006935-3007041:-1:exon
so has part: feature:3002465-3002673:-1:exon
so has part: feature:3001145-3001374:-1:exon
so has part: feature:2998462-2998578:-1:exon
so has part: feature:2998113-2998301:-1:exon
so has part: feature:2992114-2992161:-1:exon
so has part: feature:2990058-2990169:-1:exon
so has part: feature:2989485-2989546:-1:exon
so has part: feature:2988530-2988722:-1:exon
so has part: feature:2987713-2987841:-1:exon
so has part: feature:2986176-2986281:-1:exon
so has part: feature:2985218-2985349:-1:exon
so has part: feature:2984253-2984376:-1:exon
so has part: feature:2974704-2974906:-1:exon
so has part: feature:2972907-2973049:-1:exon
so has part: feature:2968217-2971935:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3218556-3219462:-1:exon

position:3218556:-1
position: 3218556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3125742-3125836:-1:exon

position:3125742:-1
position: 3125742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3125836:-1
position: 3125836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3117308-3117370:-1:exon

position:3117308:-1
position: 3117308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3117370:-1
position: 3117370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3113535-3113634:-1:exon

position:3113535:-1
position: 3113535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3113634:-1
position: 3113634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3110636-3110692:-1:exon

position:3110636:-1
position: 3110636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3110692:-1
position: 3110692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3105395-3105492:-1:exon

position:3105395:-1
position: 3105395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3105492:-1
position: 3105492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3102190-3102316:-1:exon

position:3102190:-1
position: 3102190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3102316:-1
position: 3102316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3101267-3101356:-1:exon

position:3101267:-1
position: 3101267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3101356:-1
position: 3101356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3095626-3095742:-1:exon

position:3095626:-1
position: 3095626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3095742:-1
position: 3095742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3094523-3094657:-1:exon

position:3094523:-1
position: 3094523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3094657:-1
position: 3094657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3069187-3069308:-1:exon

position:3069187:-1
position: 3069187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3069308:-1
position: 3069308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3063465-3063606:-1:exon

position:3063465:-1
position: 3063465
reference: sequence
type: ReverseStrandPosition
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SIO_000300: 13
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urn:…
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urn:…
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urn:…
SIO_000300: 16
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urn:…
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urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
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SIO_000300: 20
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SIO_000300: 21
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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
SIO_000628: feature:3025098-3025402:-1:exon

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urn:…
SIO_000300: 24
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SIO_000300: 25
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SIO_000300: 26
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SIO_000300: 27
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SIO_000300: 30
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SIO_000300: 31
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SIO_000300: 33
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SIO_000300: 35
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SIO_000300: 36
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SIO_000300: 37
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SIO_000300: 38
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SIO_000300: 39
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SIO_000300: 40
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SIO_000300: 41
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SIO_000300: 42
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myo9aa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: myo9aa
product: myosin IXAa, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038784179.1
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
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urn:…
SIO_000300: 1
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SIO_000628: feature:3125742-3125836:-1:exon

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urn:…
SIO_000300: 6
SIO_000628: feature:3105395-3105495:-1:exon

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urn:…
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SIO_000300: 8
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SIO_000628: feature:3095626-3095742:-1:exon

urn:…
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SIO_000628: feature:3094523-3094657:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3069187-3069308:-1:exon

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SIO_000628: feature:3063465-3063606:-1:exon

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SIO_000628: feature:2992114-2992161:-1:exon

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urn:…
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SIO_000628: feature:2988530-2988722:-1:exon

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urn:…
SIO_000300: 39
SIO_000628: feature:2980826-2980879:-1:exon

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urn:…
SIO_000300: 40
SIO_000628: feature:2977151-2977168:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 41
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urn:…
SIO_000300: 42
SIO_000628: feature:2972907-2973049:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2968217-2971935:-1:exon

myo9aa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: myo9aa
product: myosin IXAa, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_038784180.1
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
location: complement(join(2968217..2971935,2972907..2973049,2974704..2974906,2977151..2977168,2980826..2980879,2984253..2984376,2985218..2985349,2986176..2986281,2987713..2987841,2988530..2988722,2989485..2989546,2990058..2990169,2992114..2992161,2998113..2998301,2998462..2998578,3001145..3001374,3002465..3002673,3006935..3007041,3017566..3017668,3023021..3024757,3025098..3025402,3027186..3027335,3028424..3028546,3029580..3029690,3031565..3031645,3033355..3033477,3040222..3040261,3041641..3041784,3053928..3054003,3056436..3056555,3061155..3061350,3063465..3063606,3069187..3069308,3094523..3094657,3095626..3095742,3101267..3101356,3102190..3102316,3105395..3105495,3110636..3110692,3113535..3113634,3117308..3117370,3125742..3125836,3218556..3219462))
location: region:2968217-3219462:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:3218556-3219462:-1:exon

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SIO_000300: 12
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myo9aa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: myo9aa
product: myosin IXAa, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038784177.1
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
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myo9aa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: myo9aa
product: myosin IXAa, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038784175.1
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
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myo9aa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: myo9aa
product: myosin IXAa, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038784176.1
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
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so has part: feature:2972907-2973049:-1:exon
so has part: feature:2968217-2971935:-1:exon

position:3219398:-1
position: 3219398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3218556-3219398:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:2972907-2973049:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2968217-2971935:-1:exon

myo9aa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: myo9aa
product: myosin IXAa, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_038784178.1
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
location: complement(join(2971448..2971935,2972907..2973049,2974704..2974906,2984253..2984376,2985218..2985349,2986176..2986281,2987713..2987841,2988530..2988722,2989485..2989546,2990058..2990169,2992114..2992161,2998113..2998301,2998462..2998578,3001145..3001374,3002465..3002673,3006935..3007041,3016519..3016731,3017566..3017668,3023021..3024757,3025098..3025402,3027186..3027335,3028424..3028546,3029580..3029690,3031565..3031645,3033355..3033477,3040222..3040261,3041641..3041784,3053928..3054003,3056436..3056555,3061155..3061350,3063465..3063606,3069187..3069308,3094523..3094657,3095626..3095742,3101267..3101356,3102190..3102316,3105395..3105495,3110636..3110692,3113535..3113634,3117308..3117370,3125742..3125836,3218556..3219462))
location: region:2971448-3219462:-1
so has part: feature:3218556-3219462:-1:exon
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position:2971448:-1
position: 2971448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3218556-3219462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3125742-3125836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3117308-3117370:-1:exon

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SIO_000300: 4
SIO_000628: feature:3113535-3113634:-1:exon

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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 11
SIO_000628: feature:3069187-3069308:-1:exon

urn:…
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SIO_000628: feature:3061155-3061350:-1:exon

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SIO_000628: feature:3056436-3056555:-1:exon

urn:…
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urn:…
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SIO_000628: feature:3041641-3041784:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:3025098-3025402:-1:exon

urn:…
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SIO_000628: feature:3023021-3024757:-1:exon

urn:…
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SIO_000628: feature:3017566-3017668:-1:exon

urn:…
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SIO_000628: feature:3016519-3016731:-1:exon

urn:…
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urn:…
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SIO_000628: feature:3002465-3002673:-1:exon

urn:…
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SIO_000628: feature:3001145-3001374:-1:exon

urn:…
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urn:…
SIO_000300: 31
SIO_000628: feature:2998113-2998301:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2992114-2992161:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2990058-2990169:-1:exon

urn:…
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SIO_000628: feature:2989485-2989546:-1:exon

urn:…
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SIO_000628: feature:2988530-2988722:-1:exon

urn:…
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SIO_000628: feature:2987713-2987841:-1:exon

urn:…
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SIO_000628: feature:2986176-2986281:-1:exon

urn:…
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SIO_000628: feature:2985218-2985349:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2984253-2984376:-1:exon

urn:…
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SIO_000628: feature:2974704-2974906:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2972907-2973049:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2971448-2971935:-1:exon

myo9aa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: myo9aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-IXAa isoform X7
translation: MNVHDVGGRRRYEDNEFTLRVYPGNIAECTIYCPVTARKNTSAAEVIETLIYKLQLEKAKCYVLAEVKEFGGEEWILNPTDCPVQRMMLWPRSALENRFSSEDYRFLLREKNLDGSIHYNNLQSWLRVTEERRIMMERGFLPQPPQKNYNDLCNLPDLNEKALLDNLRNRFKQEKIYTYVGTILIAINPFKFLPIYNPKYVKMYDNHPLGKLEPHIYAIADVAYHAMLQRKKNQCIVISGESGSGKTQSTNFLIHHLTALSQKGFASGVEQIILGAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYQETGTVRGAYVEKYLLEKSRLVYQEHNERNYHVFYYLLAGANEDEKKSFHLLEPEEYHYLNQMTKKPLRQTWDDYYYDSEPDSFSVEGEDLKHDFERLQLAMEMVGFLPMTRKRIFSLLSAILHLGNIKYKKKTYRDDSVDICNPEVLPIVSELLEVKEETLFEALTTRKTVTVGERLILPYRLSEAVTVRDSMAKSLYSALFDWIVFRINHALLNNRDLEEHKKILSIGVLDIFGFEDYENNSFEQFCINFANERLQHYFNQHIFKMEQEEYRSEGISWHNIDYIDNSGCINLISKKPTGLLHLLDEECNFPQATNQTLLDKFKRQYEGNNYIEFPTVMEQAFIIKHYAGKVKYQMKDFREKNTDHMRPDIVALLKSSKNAFICGLIGIDPVAVFRWSILRSFFRAAVAFREAGKRYVEKKPGHDDAVPFPVLKSVDSFSFLHHPVHQRSLEILQRCKEEKYSITRKSPRTPLSNLQGTNTINDKSPRDLHGTSWNGRTGIQAARHPSSHSLLDDEGIFLNSASTKLLERAHGILMRNRNSKTKPVLPKHLLDVKSLKYLGSLTLHDRITKSLLHLHKKKKTPSISAQFQASLNKLMETLGQAEPYFVKCIRSNAEKLPLRFNDHLVLRQLRYTGMLETVRIRQSGYSIKYSFQEFVTHFRVLLPRSTVSSQRSIGQFLRNVNLDTISYQVGKTMIFMKEIERQRLQDMLHKEVLTHIILLQSWFRAILERRQFLQMKQAAVIIQNYWRNYKLKQNHIYTDLSVLNAAATSIQAVWKGYRQRQMLMKMHDAAIVIQRCWHDYYRCRLAALCIQTHWRRYKEMQTYRAFRDSIIKIQAANRGFVVRRRFQALRRQKLKNKKQLDCEKKGNLNKQIPDENLPEIIRTDLNKFEDEANEIPTSKENDSEQTYSECNNNSVDLQGETYDFSDSTNVLQGVIVRERPKSLSGDPDKQKVVRAKRHSRRMRELEQAKFSLELLKVRSGGVSPSEEGRWSTELVSDSVNSLSPQGTPDSESSRGSFEVPSCEDGQKRKQSLTVSDDPVSDSNLHTTQDYLSTSPKPNDHSLSTGLKLDGKHLSSSSFYTNTNHTGLISTSPRSTNEEFSFHSPRSNSEDRSPSPRSRESLFSSPKPDYSLSTLLPNHDILSSSTKPNDTIIIGSDHYTVEGTIAEPKTERGEDGNTSLDQPLDGELSSIEDSAGTDPFPQIAVLERLERLNVQQAERQQQKQQQNEKEMMEQIRQQTEILEKQRKVFEKQEKDMFEKQRGDALQKIEQCRQNDSPLLPFRSPSKQADRPQSCLALHPEKKWDSTNYSDSHSISTIESKMLNTAEFFEHDNTLGHPGVKDRPISMFFEKKELQQSGQQEMNKLDGWTPKFSLEHREPVPGTEQSRQAKPQKGTANAREEFTDGNAKDRTNALFFLPKDKTTLSKLDKDSVNLEKSELSKGEQPFREKMVKTSLLKETDVARPVRKKKARMARTRSDFLTRGCNAEGEGESEDEEYDDPSADPPLSPDQPGSELRPKDSAGQACHSDSEMMQSTRNEDQRKLHKAQSQDELGRLDPVQGSNVPDGRAPLKGRMRFWGTRKQGEKKLSRDKLATQSELQELNMDQDIQGQPWKRELKPSETSLSLSLTEGKDGAFKGQDPIPPNPTPPRSPDLGLERGKEFKENKEPSPKVKRRRSVKISNVGLEPIQWQHDAL…
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
location: complement(join(2971448..2971935,2972907..2973049,2974704..2974906,2984253..2984376,2985218..2985349,2986176..2986281,2987713..2987841,2988530..2988722,2989485..2989546,2990058..2990169,2992114..2992161,2998113..2998301,2998462..2998578,3001145..3001374,3002465..3002673,3006935..3007041,3016519..3016731,3017566..3017668,3023021..3024757,3025098..3025402,3027186..3027335,3028424..3028546,3029580..3029690,3031565..3031645,3033355..3033477,3040222..3040261,3041641..3041784,3053928..3054003,3056436..3056555,3061155..3061350,3063465..3063606,3069187..3069308,3094523..3094657,3095626..3095742,3101267..3101356,3102190..3102316,3105395..3105492,3110636..3110692,3113535..3113634,3117308..3117370,3125742..3125836,3218556..3219398))
location: region:2971448-3219398:-1
so has part: feature:3218556-3219398:-1:exon
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so has part: feature:2972907-2973049:-1:exon
so has part: feature:2971448-2971935:-1:exon

XP_038640109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3218556-3219398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3125742-3125836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3117308-3117370:-1:exon

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SIO_000628: feature:3113535-3113634:-1:exon

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SIO_000628: feature:3110636-3110692:-1:exon

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SIO_000628: feature:3105395-3105492:-1:exon

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SIO_000628: feature:3102190-3102316:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3101267-3101356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3095626-3095742:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3094523-3094657:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3069187-3069308:-1:exon

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SIO_000300: 12
SIO_000628: feature:3063465-3063606:-1:exon

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SIO_000628: feature:3061155-3061350:-1:exon

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SIO_000628: feature:3056436-3056555:-1:exon

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SIO_000628: feature:3053928-3054003:-1:exon

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SIO_000628: feature:3041641-3041784:-1:exon

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SIO_000628: feature:3033355-3033477:-1:exon

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SIO_000628: feature:3031565-3031645:-1:exon

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urn:…
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urn:…
SIO_000300: 26
SIO_000628: feature:3016519-3016731:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3006935-3007041:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3002465-3002673:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3001145-3001374:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2998462-2998578:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2998113-2998301:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2992114-2992161:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2990058-2990169:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2989485-2989546:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2988530-2988722:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2987713-2987841:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2986176-2986281:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2985218-2985349:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2984253-2984376:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2974704-2974906:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2972907-2973049:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2971448-2971935:-1:exon

myo9aa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: myo9aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-IXAa isoform X2
translation: MNVHDVGGRRRYEDNEFTLRVYPGNIAECTIYCPVTARKNTSAAEVIETLIYKLQLEKAKCYVLAEVKEFGGEEWILNPTDCPVQRMMLWPRSALENRFSSEDYRFLLREKNLDGSIHYNNLQSWLRVTEERRIMMERGFLPQPPQKNYNDLCNLPDLNEKALLDNLRNRFKQEKIYTYVGTILIAINPFKFLPIYNPKYVKMYDNHPLGKLEPHIYAIADVAYHAMLQRKKNQCIVISGESGSGKTQSTNFLIHHLTALSQKGFASGVEQIILGAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYQETGTVRGAYVEKYLLEKSRLVYQEHNERNYHVFYYLLAGANEDEKKSFHLLEPEEYHYLNQMTKKPLRQTWDDYYYDSEPDSFSVEGEDLKHDFERLQLAMEMVGFLPMTRKRIFSLLSAILHLGNIKYKKKTYRDDSVDICNPEVLPIVSELLEVKEETLFEALTTRKTVTVGERLILPYRLSEAVTVRDSMAKSLYSALFDWIVFRINHALLNNRDLEEHKKILSIGVLDIFGFEDYENNSFEQFCINFANERLQHYFNQHIFKMEQEEYRSEGISWHNIDYIDNSGCINLISKKPTGLLHLLDEECNFPQATNQTLLDKFKRQYEGNNYIEFPTVMEQAFIIKHYAGKVKYQMKDFREKNTDHMRPDIVALLKSSKNAFICGLIGIDPVAVFRWSILRSFFRAAVAFREAGKRYVEKKPGHDDAVPFPVLKSVDSFSFLHHPVHQRSLEILQRCKEEKYSITRKSPRTPLSNLQGTNTINDKSPRDLHGTSWNGRTGIQAARHPSSHSLLDDEGIFLNSASTKLLERAHGILMRNRNSKTKPVLPKHLLDVKSLKYLGSLTLHDRITKSLLHLHKKKKTPSISAQFQASLNKLMETLGQAEPYFVKCIRSNAEKLPLRFNDHLVLRQLRYTGMLETVRIRQSGYSIKYSFQEFVTHFRVLLPRSTVSSQRSIGQFLRNVNLDTISYQVGKTMIFMKEIERQRLQDMLHKEVLTHIILLQSWFRAILERRQFLQMKQAAVIIQNYWRNYKLKQNHIYTDLSVLNAAATSIQAVWKGYRQRQMLMKMHDAAIVIQRCWHDYYRCRLAALCIQTHWRRYKEMQTYRAFRDSIIKIQAANRGFVVRRRFQALRRQKLKNKKQLDCEKKGNLNKQIPDENLPEIIRTDLNKFEDEANEIPTSKENDSEQTYSECNNNSVDLQGETYDFSDSTNVLQGVIVRERPKSLSGDPDKQKVVRAKRHSRRMRELEQAKFSLELLKVRSGGVSPSEEGRWSTELVSDSVNSLSPQGTPDSESSRGSFEVPSCEDGQKRKQSLTVSDDPVSDSNLHTTQDYLSTSPKPNDHSLSTGLKLDGKHLSSSSFYTNTNHTGLISTSPRSTNEEFSFHSPRSNSEDRSPSPRSRESLFSSPKPDYSLSTLLPNHDILSSSTKPNDTIIIGSDHYTVEGTIAEPKTERGEDGNTSLDQPLDGELSSIEDSAGTDPFPQIAVLERLERLNVQQAERQQQKQQQNEKEMMEQIRQQTEILEKQRKVFEKQEKDMFEKQRGDALQKIEQCRQNDSPLLPFRSPSKQADRPQSCLALHPEKKWDSTNYSDSHSISTIESKMLNTAEFFEHDNTLGHPGVKDRPISMFFEKKELQQSGQQEMNKLDGWTPKFSLEHREPVPGTEQSRQAKPQKGTANAREEFTDGNAKDRTNALFFLPKDKTTLSKLDKDSVNLEKSELSKGEQPFREKMVKTSLLKETDVARPVRKKKARMARTRSDFLTRGCNAEGEGESEDEEYDDPSADPPLSPDQPGSELRPKDSAGQACHSDSEMMQSTRNEDQRKLHKAQSQDELGRLDPVQGSNVPDGRAPLKGRMRFWGTRKQGEKKLSRDKLATQSELQELNMDQDIQGQPWKRELKPSETSLSLSLTEGKDGAFKGQDPIPPNPTPPRSPDLGLERGKEFKENKEPSPKVKRRRSVKISNVGLEPIQWQHDAL…
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
location: complement(join(2971448..2971935,2972907..2973049,2974704..2974906,2977151..2977168,2980826..2980879,2984253..2984376,2985218..2985349,2986176..2986281,2987713..2987841,2988530..2988722,2989485..2989546,2990058..2990169,2992114..2992161,2998113..2998301,2998462..2998578,3001145..3001374,3002465..3002673,3006935..3007041,3016519..3016731,3017566..3017668,3023021..3024757,3025098..3025402,3027186..3027335,3028424..3028546,3029580..3029690,3031565..3031645,3033355..3033477,3040222..3040261,3041641..3041784,3053928..3054003,3056436..3056555,3061155..3061350,3063465..3063606,3069187..3069308,3094523..3094657,3095626..3095742,3101267..3101356,3102190..3102316,3105395..3105492,3110636..3110692,3113535..3113634,3117308..3117370,3125742..3125836,3218556..3219398))
location: region:2971448-3219398:-1
so has part: feature:3218556-3219398:-1:exon
so has part: feature:3125742-3125836:-1:exon
so has part: feature:3117308-3117370:-1:exon
so has part: feature:3113535-3113634:-1:exon
so has part: feature:3110636-3110692:-1:exon
so has part: feature:3105395-3105492:-1:exon
so has part: feature:3102190-3102316:-1:exon
so has part: feature:3101267-3101356:-1:exon
so has part: feature:3095626-3095742:-1:exon
so has part: feature:3094523-3094657:-1:exon
so has part: feature:3069187-3069308:-1:exon
so has part: feature:3063465-3063606:-1:exon
so has part: feature:3061155-3061350:-1:exon
so has part: feature:3056436-3056555:-1:exon
so has part: feature:3053928-3054003:-1:exon
so has part: feature:3041641-3041784:-1:exon
so has part: feature:3040222-3040261:-1:exon
so has part: feature:3033355-3033477:-1:exon
so has part: feature:3031565-3031645:-1:exon
so has part: feature:3029580-3029690:-1:exon
so has part: feature:3028424-3028546:-1:exon
so has part: feature:3027186-3027335:-1:exon
so has part: feature:3025098-3025402:-1:exon
so has part: feature:3023021-3024757:-1:exon
so has part: feature:3017566-3017668:-1:exon
so has part: feature:3016519-3016731:-1:exon
so has part: feature:3006935-3007041:-1:exon
so has part: feature:3002465-3002673:-1:exon
so has part: feature:3001145-3001374:-1:exon
so has part: feature:2998462-2998578:-1:exon
so has part: feature:2998113-2998301:-1:exon
so has part: feature:2992114-2992161:-1:exon
so has part: feature:2990058-2990169:-1:exon
so has part: feature:2989485-2989546:-1:exon
so has part: feature:2988530-2988722:-1:exon
so has part: feature:2987713-2987841:-1:exon
so has part: feature:2986176-2986281:-1:exon
so has part: feature:2985218-2985349:-1:exon
so has part: feature:2984253-2984376:-1:exon
so has part: feature:2980826-2980879:-1:exon
so has part: feature:2977151-2977168:-1:exon
so has part: feature:2974704-2974906:-1:exon
so has part: feature:2972907-2973049:-1:exon
so has part: feature:2971448-2971935:-1:exon

XP_038640104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3218556-3219398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3125742-3125836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3117308-3117370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3113535-3113634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3110636-3110692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3105395-3105492:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3102190-3102316:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3101267-3101356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3095626-3095742:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3094523-3094657:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3069187-3069308:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3063465-3063606:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3061155-3061350:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3056436-3056555:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3053928-3054003:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3041641-3041784:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3040222-3040261:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3033355-3033477:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3031565-3031645:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3029580-3029690:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3028424-3028546:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3027186-3027335:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3025098-3025402:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3023021-3024757:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3017566-3017668:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3016519-3016731:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3006935-3007041:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3002465-3002673:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3001145-3001374:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2998462-2998578:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2998113-2998301:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2992114-2992161:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2990058-2990169:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2989485-2989546:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2988530-2988722:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2987713-2987841:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2986176-2986281:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2985218-2985349:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2984253-2984376:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2980826-2980879:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2977151-2977168:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2974704-2974906:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2972907-2973049:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2971448-2971935:-1:exon

myo9aa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: myo9aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-IXAa isoform X5
translation: MNVHDVGGRRRYEDNEFTLRVYPGNIAECTIYCPVTARKNTSAAEVIETLIYKLQLEKAKCYVLAEVKEFGGEEWILNPTDCPVQRMMLWPRSALENRFSSEDYRFLLREKNLDGSIHYNNLQSWLRVTEERRIMMERGFLPQPPQKNYNDLCNLPDLNEKALLDNLRNRFKQEKIYTYVGTILIAINPFKFLPIYNPKYVKMYDNHPLGKLEPHIYAIADVAYHAMLQRKKNQCIVISGESGSGKTQSTNFLIHHLTALSQKGFASGVEQIILGAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYQETGTVRGAYVEKYLLEKSRLVYQEHNERNYHVFYYLLAGANEDEKKSFHLLEPEEYHYLNQMTKKPLRQTWDDYYYDSEPQDSFSVEGEDLKHDFERLQLAMEMVGFLPMTRKRIFSLLSAILHLGNIKYKKKTYRDDSVDICNPEVLPIVSELLEVKEETLFEALTTRKTVTVGERLILPYRLSEAVTVRDSMAKSLYSALFDWIVFRINHALLNNRDLEEHKKILSIGVLDIFGFEDYENNSFEQFCINFANERLQHYFNQHIFKMEQEEYRSEGISWHNIDYIDNSGCINLISKKPTGLLHLLDEECNFPQATNQTLLDKFKRQYEGNNYIEFPTVMEQAFIIKHYAGKVKYQMKDFREKNTDHMRPDIVALLKSSKNAFICGLIGIDPVAVFRWSILRSFFRAAVAFREAGKRYVEKKPGITRKSPRTPLSNLQGTNTINDKSPRDLHGTSWNGRTGIQAARHPSSHSLLDDEGIFLNSASTKLLERAHGILMRNRNSKTKPVLPKHLLDVKSLKYLGSLTLHDRITKSLLHLHKKKKTPSISAQFQASLNKLMETLGQAEPYFVKCIRSNAEKLPLRFNDHLVLRQLRYTGMLETVRIRQSGYSIKYSFQEFVTHFRVLLPRSTVSSQRSIGQFLRNVNLDTISYQVGKTMIFMKEIERQRLQDMLHKEVLTHIILLQSWFRAILERRQFLQMKQAAVIIQNYWRNYKLKQNHIYTDLSVLNAAATSIQAVWKGYRQRQMLMKMHDAAIVIQRCWHDYYRCRLAALCIQTHWRRYKEMQTYRAFRDSIIKIQAANRGFVVRRRFQALRRQKLKNKKQLDCEKKGNLNKQIPDENLPEIIRTDLNKFEDEANEIPTSKENDSEQTYSECNNNSVDLQGETYDFSDSTNVLQGVIVRERPKSLSGDPDKQKVVRAKRHSRRMRELEQAKFSLELLKVRSGGVSPSEEGRWSTELVSDSVNSLSPQGTPDSESSRGSFEVPSCEDGQKRKQSLTVSDDPVSDSNLHTTQDYLSTSPKPNDHSLSTGLKLDGKHLSSSSFYTNTNHTGLISTSPRSTNEEFSFHSPRSNSEDRSPSPRSRESLFSSPKPDYSLSTLLPNHDILSSSTKPNDTIIIGSDHYTVEGTIAEPKTERGEDGNTSLDQPLDGELSSIEDSAGTDPFPQIAVLERLERLNVQQAERQQQKQQQNEKEMMEQIRQQTEILEKQRKVFEKQEKDMFEKQRGDALQKIEQCRQNDSPLLPFRSPSKQADRPQSCLALHPEKKWDSTNYSDSHSISTIESKMLNTAEFFEHDNTLGHPGVKDRPISMFFEKKELQQSGQQEMNKLDGWTPKFSLEHREPVPGTEQSRQAKPQKGTANAREEFTDGNAKDRTNALFFLPKDKTTLSKLDKDSVNLEKSELSKGEQPFREKMVKTSLLKETDVARPVRKKKARMARTRSDFLTRGCNAEGEGESEDEEYDDPSADPPLSPDQPGSELRPKDSAGQACHSDSEMMQSTRNEDQRKLHKAQSQDELGRLDPVQGSNVPDGRAPLKGRMRFWGTRKQGEKKLSRDKLATQSELQELNMDQDIQGQPWKRELKPSETSLSLSLTEGKDGAFKGQDPIPPNPTPPRSPDLGLERGKEFKENKEPSPKVKRRRSVKISNVGLEPIQWQHDALQIITSANDFKCMTEFLQKKITELDTDEGKKDTFVDVVFK…
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
location: complement(join(2971448..2971935,2972907..2973049,2974704..2974906,2977151..2977168,2980826..2980879,2984253..2984376,2985218..2985349,2986176..2986281,2987713..2987841,2988530..2988722,2989485..2989546,2990058..2990169,2992114..2992161,2998113..2998301,2998462..2998578,3001145..3001374,3002465..3002673,3006935..3007041,3016519..3016731,3017566..3017668,3023021..3024757,3025098..3025402,3027186..3027335,3028424..3028546,3029580..3029690,3031565..3031645,3033355..3033477,3040222..3040261,3041641..3041784,3053928..3054003,3061155..3061350,3063465..3063606,3069187..3069308,3094523..3094657,3095626..3095742,3101267..3101356,3102190..3102316,3105395..3105495,3110636..3110692,3113535..3113634,3117308..3117370,3125742..3125836,3218556..3219398))
location: region:2971448-3219398:-1
so has part: feature:3218556-3219398:-1:exon
so has part: feature:3125742-3125836:-1:exon
so has part: feature:3117308-3117370:-1:exon
so has part: feature:3113535-3113634:-1:exon
so has part: feature:3110636-3110692:-1:exon
so has part: feature:3105395-3105495:-1:exon
so has part: feature:3102190-3102316:-1:exon
so has part: feature:3101267-3101356:-1:exon
so has part: feature:3095626-3095742:-1:exon
so has part: feature:3094523-3094657:-1:exon
so has part: feature:3069187-3069308:-1:exon
so has part: feature:3063465-3063606:-1:exon
so has part: feature:3061155-3061350:-1:exon
so has part: feature:3053928-3054003:-1:exon
so has part: feature:3041641-3041784:-1:exon
so has part: feature:3040222-3040261:-1:exon
so has part: feature:3033355-3033477:-1:exon
so has part: feature:3031565-3031645:-1:exon
so has part: feature:3029580-3029690:-1:exon
so has part: feature:3028424-3028546:-1:exon
so has part: feature:3027186-3027335:-1:exon
so has part: feature:3025098-3025402:-1:exon
so has part: feature:3023021-3024757:-1:exon
so has part: feature:3017566-3017668:-1:exon
so has part: feature:3016519-3016731:-1:exon
so has part: feature:3006935-3007041:-1:exon
so has part: feature:3002465-3002673:-1:exon
so has part: feature:3001145-3001374:-1:exon
so has part: feature:2998462-2998578:-1:exon
so has part: feature:2998113-2998301:-1:exon
so has part: feature:2992114-2992161:-1:exon
so has part: feature:2990058-2990169:-1:exon
so has part: feature:2989485-2989546:-1:exon
so has part: feature:2988530-2988722:-1:exon
so has part: feature:2987713-2987841:-1:exon
so has part: feature:2986176-2986281:-1:exon
so has part: feature:2985218-2985349:-1:exon
so has part: feature:2984253-2984376:-1:exon
so has part: feature:2980826-2980879:-1:exon
so has part: feature:2977151-2977168:-1:exon
so has part: feature:2974704-2974906:-1:exon
so has part: feature:2972907-2973049:-1:exon
so has part: feature:2971448-2971935:-1:exon

XP_038640107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3218556-3219398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3125742-3125836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3117308-3117370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3113535-3113634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3110636-3110692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3105395-3105495:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3102190-3102316:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3101267-3101356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3095626-3095742:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3094523-3094657:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3069187-3069308:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3063465-3063606:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3061155-3061350:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3053928-3054003:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3041641-3041784:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3040222-3040261:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3033355-3033477:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3031565-3031645:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3029580-3029690:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3028424-3028546:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3027186-3027335:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3025098-3025402:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3023021-3024757:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3017566-3017668:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3016519-3016731:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3006935-3007041:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3002465-3002673:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3001145-3001374:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2998462-2998578:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2998113-2998301:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2992114-2992161:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2990058-2990169:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2989485-2989546:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2988530-2988722:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2987713-2987841:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2986176-2986281:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2985218-2985349:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2984253-2984376:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2980826-2980879:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2977151-2977168:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2974704-2974906:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2972907-2973049:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2971448-2971935:-1:exon

myo9aa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: myo9aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-IXAa isoform X6
translation: MNVHDVGGRRRYEDNEFTLRVYPGNIAECTIYCPVTARKNTSAAEVIETLIYKLQLEKAKCYVLAEVKEFGGEEWILNPTDCPVQRMMLWPRSALENRFSSEDYRFLLREKNLDGSIHYNNLQSWLRVTEERRIMMERGFLPQPPQKNYNDLCNLPDLNEKALLDNLRNRFKQEKIYTYVGTILIAINPFKFLPIYNPKYVKMYDNHPLGKLEPHIYAIADVAYHAMLQRKKNQCIVISGESGSGKTQSTNFLIHHLTALSQKGFASGVEQIILGAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYQETGTVRGAYVEKYLLEKSRLVYQEHNERNYHVFYYLLAGANEDEKKSFHLLEPEEYHYLNQMTKKPLRQTWDDYYYDSEPQDSFSVEGEDLKHDFERLQLAMEMVGFLPMTRKRIFSLLSAILHLGNIKYKKKTYRDDSVDICNPEVLPIVSELLEVKEETLFEALTTRKTVTVGERLILPYRLSEAVTVRDSMAKSLYSALFDWIVFRINHALLNNRDLEEHKKILSIGVLDIFGFEDYENNSFEQFCINFANERLQHYFNQHIFKMEQEEYRSEGISWHNIDYIDNSGCINLISKKPTGLLHLLDEECNFPQATNQTLLDKFKRQYEGNNYIEFPTVMEQAFIIKHYAGKVKYQMKDFREKNTDHMRPDIVALLKSSKNAFICGLIGIDPVAVFRWSILRSFFRAAVAFREAGKRYVEKKPGHDDAVPFPVLKSVDSFSFLHHPVHQRSLEILQRCKEEKYSITRKSPRTPLSNLQGTNTINDKSPRDLHGTSWNGRTGIQAARHPSSHSLLDDEGIFLNSASTKLLERAHGILMRNRNSKTKPVLPKHLLDVKSLKYLGSLTLHDRITKSLLHLHKKKKTPSISAQFQASLNKLMETLGQAEPYFVKCIRSNAEKLPLRFNDHLVLRQLRYTGMLETVRIRQSGYSIKYSFQEFVTHFRVLLPRSTVSSQRSIGQFLRNVNLDTISYQVGKTMIFMKEIERQRLQDMLHKEVLTHIILLQSWFRAILERRQFLQMKQAAVIIQNYWRNYKLKQNHIYTDLSVLNAAATSIQAVWKGYRQRQMLMKMHDAAIVIQRCWHDYYRCRLAALCIQTHWRRYKEMQTYRAFRDSIIKIQAANRGFVVRRRFQALRRQKLKNKKQLDCEKKGNLNKQIPDENLPEIIRTDLNKFEDEANEIPTSKENDSEQTYSECNNNSVDLQGETYDFSDSTNVLQGVIVRERPKSLSGDPDKQKVVRAKRHSRRMRELEQAKFSLELLKVRSGGVSPSEEGRWSTELVSDSVNSLSPQGTPDSESSRGSFEVPSCEDGQKRKQSLTVSDDPVSDSNLHTTQDYLSTSPKPNDHSLSTGLKLDGKHLSSSSFYTNTNHTGLISTSPRSTNEEFSFHSPRSNSEDRSPSPRSRESLFSSPKPDYSLSTLLPNHDILSSSTKPNDTIIIGSDHYTVEGTIAEPKTERGEDGNTSLDQPLDGELSSIEDSAGTDPFPQIAVLERLERLNVQQAERQQQKQQQNEKEMMEQIRQQTEILEKQRKVFEKQEKDMFEKQRGDALQKIEQCRQNDSPLLPFRSPSKQADRPQSCLALHPEKKWDSTNYSDSHSISTIESKMLNTAEFFEHDNTLGHPGVKDRPISMFFEKKELQQSGQQEMNKLDGWTPKFSLEHREPVPGTEQSRQAKPQKGTANAREEFTDGNAKDRTNALFFLPKDKTTLSKLDKDSVNLEKSELSKGEQPFREKMVKTSLLKETDMQSTRNEDQRKLHKAQSQDELGRLDPVQGSNVPDGRAPLKGRMRFWGTRKQGEKKLSRDKLATQSELQELNMDQDIQGQPWKRELKPSETSLSLSLTEGKDGAFKGQDPIPPNPTPPRSPDLGLERGKEFKENKEPSPKVKRRRSVKISNVGLEPIQWQHDALQIITSANDFKCMTEFLQKKITELDTDEGKKDTFVDVVFKKSLKEFRLNIFNSYSAALAMDNGKSIRYKDL…
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
location: complement(join(2971448..2971935,2972907..2973049,2974704..2974906,2977151..2977168,2980826..2980879,2984253..2984376,2985218..2985349,2986176..2986281,2987713..2987841,2988530..2988722,2989485..2989546,2990058..2990169,2992114..2992161,2998113..2998301,2998462..2998578,3001145..3001374,3002465..3002673,3006935..3007041,3017566..3017668,3023021..3024757,3025098..3025402,3027186..3027335,3028424..3028546,3029580..3029690,3031565..3031645,3033355..3033477,3040222..3040261,3041641..3041784,3053928..3054003,3056436..3056555,3061155..3061350,3063465..3063606,3069187..3069308,3094523..3094657,3095626..3095742,3101267..3101356,3102190..3102316,3105395..3105495,3110636..3110692,3113535..3113634,3117308..3117370,3125742..3125836,3218556..3219398))
location: region:2971448-3219398:-1
so has part: feature:3218556-3219398:-1:exon
so has part: feature:3125742-3125836:-1:exon
so has part: feature:3117308-3117370:-1:exon
so has part: feature:3113535-3113634:-1:exon
so has part: feature:3110636-3110692:-1:exon
so has part: feature:3105395-3105495:-1:exon
so has part: feature:3102190-3102316:-1:exon
so has part: feature:3101267-3101356:-1:exon
so has part: feature:3095626-3095742:-1:exon
so has part: feature:3094523-3094657:-1:exon
so has part: feature:3069187-3069308:-1:exon
so has part: feature:3063465-3063606:-1:exon
so has part: feature:3061155-3061350:-1:exon
so has part: feature:3056436-3056555:-1:exon
so has part: feature:3053928-3054003:-1:exon
so has part: feature:3041641-3041784:-1:exon
so has part: feature:3040222-3040261:-1:exon
so has part: feature:3033355-3033477:-1:exon
so has part: feature:3031565-3031645:-1:exon
so has part: feature:3029580-3029690:-1:exon
so has part: feature:3028424-3028546:-1:exon
so has part: feature:3027186-3027335:-1:exon
so has part: feature:3025098-3025402:-1:exon
so has part: feature:3023021-3024757:-1:exon
so has part: feature:3017566-3017668:-1:exon
so has part: feature:3006935-3007041:-1:exon
so has part: feature:3002465-3002673:-1:exon
so has part: feature:3001145-3001374:-1:exon
so has part: feature:2998462-2998578:-1:exon
so has part: feature:2998113-2998301:-1:exon
so has part: feature:2992114-2992161:-1:exon
so has part: feature:2990058-2990169:-1:exon
so has part: feature:2989485-2989546:-1:exon
so has part: feature:2988530-2988722:-1:exon
so has part: feature:2987713-2987841:-1:exon
so has part: feature:2986176-2986281:-1:exon
so has part: feature:2985218-2985349:-1:exon
so has part: feature:2984253-2984376:-1:exon
so has part: feature:2980826-2980879:-1:exon
so has part: feature:2977151-2977168:-1:exon
so has part: feature:2974704-2974906:-1:exon
so has part: feature:2972907-2973049:-1:exon
so has part: feature:2971448-2971935:-1:exon

XP_038640108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3218556-3219398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3125742-3125836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3117308-3117370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3113535-3113634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3110636-3110692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3105395-3105495:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3102190-3102316:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3101267-3101356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3095626-3095742:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3094523-3094657:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3069187-3069308:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3063465-3063606:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3061155-3061350:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3056436-3056555:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3053928-3054003:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3041641-3041784:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3040222-3040261:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3033355-3033477:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3031565-3031645:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3029580-3029690:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3028424-3028546:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3027186-3027335:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3025098-3025402:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3023021-3024757:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3017566-3017668:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3006935-3007041:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3002465-3002673:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3001145-3001374:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2998462-2998578:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2998113-2998301:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2992114-2992161:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2990058-2990169:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2989485-2989546:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2988530-2988722:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2987713-2987841:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2986176-2986281:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2985218-2985349:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2984253-2984376:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2980826-2980879:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2977151-2977168:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2974704-2974906:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2972907-2973049:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2971448-2971935:-1:exon

myo9aa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: myo9aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-IXAa isoform X4
translation: MNVHDVGGRRRYEDNEFTLRVYPGNIAECTIYCPVTARKNTSAAEVIETLIYKLQLEKAKCYVLAEVKEFGGEEWILNPTDCPVQRMMLWPRSALENRFSSEDYRFLLREKNLDGSIHYNNLQSWLRVTEERRIMMERGFLPQPPQKNYNDLCNLPDLNEKALLDNLRNRFKQEKIYTYVGTILIAINPFKFLPIYNPKYVKMYDNHPLGKLEPHIYAIADVAYHAMLQRKKNQCIVISGESGSGKTQSTNFLIHHLTALSQKGFASGVEQIILGAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYQETGTVRGAYVEKYLLEKSRLVYQEHNERNYHVFYYLLAGANEDEKKSFHLLEPEEYHYLNQMTKKPLRQTWDDYYYDSEPQDSFSVEGEDLKHDFERLQLAMEMVGFLPMTRKRIFSLLSAILHLGNIKYKKKTYRDDSVDICNPEVLPIVSELLEVKEETLFEALTTRKTVTVGERLILPYRLSEAVTVRDSMAKSLYSALFDWIVFRINHALLNNRDLEEHKKILSIGVLDIFGFEDYENNSFEQFCINFANERLQHYFNQHIFKMEQEEYRSEGISWHNIDYIDNSGCINLISKKPTGLLHLLDEECNFPQATNQTLLDKFKRQYEGNNYIEFPTVMEQAFIIKHYAGKVKYQMKDFREKNTDHMRPDIVALLKSSKNAFICGLIGIDPVAVFRWSILRSFFRAAVAFREAGKRYVEKKPGHDDAVPFPVLKSVDSFSFLHHPVHQRSLEILQRCKEEKYSITRKSPRTPLSNLQGTNTINDKSPRDLHGTSWNGRTGIQAARHPSSHSLLDDEGIFLNSASTKLLERAHGILMRNRNSKTKPVLPKHLLDVKSLKYLGSLTLHDRITKSLLHLHKKKKTPSISAQFQASLNKLMETLGQAEPYFVKCIRSNAEKLPLRFNDHLVLRQLRYTGMLETVRIRQSGYSIKYSFQEFVTHFRVLLPRSTVSSQRSIGQFLRNVNLDTISYQVGKTMIFMKEIERQRLQDMLHKEVLTHIILLQSWFRAILERRQFLQMKQAAVIIQNYWRNYKLKQNHIYTDLSVLNAAATSIQAVWKGYRQRQMLMKMHDAAIVIQRCWHDYYRCRLAALCIQTHWRRYKEMQTYRAFRDSIIKIQAANRGFVVRRRFQALRRQKLKNKKQLDCEKKGNLNKQIPDENLPEIIRTDLNKFEDEANEIPTSKENDSEQTYSECNNNSVDLQGETYDFSDSTNVLQGVIVRERPKSLSGDPDKQKVVRAKRHSRRMRELEQAKFSLELLKVRSGGVSPSEEGRWSTELVSDSVNSLSPQGTPDSESSRGSFEVPSCEDGQKRKQSLTVSDDPVSDSNLHTTQDYLSTSPKPNDHSLSTGLKLDGKHLSSSSFYTNTNHTGLISTSPRSTNEEFSFHSPRSNSEDRSPSPRSRESLFSSPKPDYSLSTLLPNHDILSSSTKPNDTIIIGSDHYTVEGTIAEPKTERGEDGNTSLDQPLDGELSSIEDSAGTDPFPQIAVLERLERLNVQQAERQQQKQQQNEKEMMEQIRQQTEILEKQRKVFEKQEKDMFEKQRGDALQKIEQCRQNDSPLLPFRSPSKQADRPQSCLALHPEKKWDSTNYSDSHSISTIESKMLNTAEFFEHDNTLGHPGVKDRPISMFFEKKELQQSGQQEMNKLDGWTPKFSLEHREPVPGTEQSRQAKPQKGTANAREEFTDGNAKDRTNALFFLPKDKTTLSKLDKDSVNLEKSELSKGEQPFREKMVKTSLLKETDVARPVRKKKARMARTRSDFLTRGCNAEGEGESEDEEYDDPSADPPLSPDQPGSELRPKDSAGQACHSDSEMMQSTRNEDQRKLHKAQSQDELGRLDPVQGSNVPDGRAPLKGRMRFWGTRKQGEKKLSRDKLATQSELQELNMDQDIQGQPWKRELKPSETSLSLSLTEGKDGAFKGQDPIPPNPTPPRSPDLGLERGKEFKENKEPSPKVKRRRSVKISNVGLEPIQWQHDA…
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
location: complement(join(2971448..2971935,2972907..2973049,2974704..2974906,2984253..2984376,2985218..2985349,2986176..2986281,2987713..2987841,2988530..2988722,2989485..2989546,2990058..2990169,2992114..2992161,2998113..2998301,2998462..2998578,3001145..3001374,3002465..3002673,3006935..3007041,3016519..3016731,3017566..3017668,3023021..3024757,3025098..3025402,3027186..3027335,3028424..3028546,3029580..3029690,3031565..3031645,3033355..3033477,3040222..3040261,3041641..3041784,3053928..3054003,3056436..3056555,3061155..3061350,3063465..3063606,3069187..3069308,3094523..3094657,3095626..3095742,3101267..3101356,3102190..3102316,3105395..3105495,3110636..3110692,3113535..3113634,3117308..3117370,3125742..3125836,3218556..3219398))
location: region:2971448-3219398:-1
so has part: feature:3218556-3219398:-1:exon
so has part: feature:3125742-3125836:-1:exon
so has part: feature:3117308-3117370:-1:exon
so has part: feature:3113535-3113634:-1:exon
so has part: feature:3110636-3110692:-1:exon
so has part: feature:3105395-3105495:-1:exon
so has part: feature:3102190-3102316:-1:exon
so has part: feature:3101267-3101356:-1:exon
so has part: feature:3095626-3095742:-1:exon
so has part: feature:3094523-3094657:-1:exon
so has part: feature:3069187-3069308:-1:exon
so has part: feature:3063465-3063606:-1:exon
so has part: feature:3061155-3061350:-1:exon
so has part: feature:3056436-3056555:-1:exon
so has part: feature:3053928-3054003:-1:exon
so has part: feature:3041641-3041784:-1:exon
so has part: feature:3040222-3040261:-1:exon
so has part: feature:3033355-3033477:-1:exon
so has part: feature:3031565-3031645:-1:exon
so has part: feature:3029580-3029690:-1:exon
so has part: feature:3028424-3028546:-1:exon
so has part: feature:3027186-3027335:-1:exon
so has part: feature:3025098-3025402:-1:exon
so has part: feature:3023021-3024757:-1:exon
so has part: feature:3017566-3017668:-1:exon
so has part: feature:3016519-3016731:-1:exon
so has part: feature:3006935-3007041:-1:exon
so has part: feature:3002465-3002673:-1:exon
so has part: feature:3001145-3001374:-1:exon
so has part: feature:2998462-2998578:-1:exon
so has part: feature:2998113-2998301:-1:exon
so has part: feature:2992114-2992161:-1:exon
so has part: feature:2990058-2990169:-1:exon
so has part: feature:2989485-2989546:-1:exon
so has part: feature:2988530-2988722:-1:exon
so has part: feature:2987713-2987841:-1:exon
so has part: feature:2986176-2986281:-1:exon
so has part: feature:2985218-2985349:-1:exon
so has part: feature:2984253-2984376:-1:exon
so has part: feature:2974704-2974906:-1:exon
so has part: feature:2972907-2973049:-1:exon
so has part: feature:2971448-2971935:-1:exon

XP_038640106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3218556-3219398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3125742-3125836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3117308-3117370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3113535-3113634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3110636-3110692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3105395-3105495:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3102190-3102316:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3101267-3101356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3095626-3095742:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3094523-3094657:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3069187-3069308:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3063465-3063606:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3061155-3061350:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3056436-3056555:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3053928-3054003:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3041641-3041784:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3040222-3040261:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3033355-3033477:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3031565-3031645:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3029580-3029690:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3028424-3028546:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3027186-3027335:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3025098-3025402:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3023021-3024757:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3017566-3017668:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3016519-3016731:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3006935-3007041:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3002465-3002673:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3001145-3001374:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2998462-2998578:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2998113-2998301:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2992114-2992161:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2990058-2990169:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2989485-2989546:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2988530-2988722:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2987713-2987841:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2986176-2986281:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2985218-2985349:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2984253-2984376:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2974704-2974906:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2972907-2973049:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2971448-2971935:-1:exon

myo9aa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: myo9aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-IXAa isoform X3
translation: MNVHDVGGRRRYEDNEFTLRVYPGNIAECTIYCPVTARKNTSAAEVIETLIYKLQLEKAKCYVLAEVKEFGGEEWILNPTDCPVQRMMLWPRSALENRFSSEDYRFLLREKNLDGSIHYNNLQSWLRVTEERRIMMERGFLPQPPQKNYNDLCNLPDLNEKALLDNLRNRFKQEKIYTYVGTILIAINPFKFLPIYNPKYVKMYDNHPLGKLEPHIYAIADVAYHAMLQRKKNQCIVISGESGSGKTQSTNFLIHHLTALSQKGFASGVEQIILGAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYQETGTVRGAYVEKYLLEKSRLVYQEHNERNYHVFYYLLAGANEDEKKSFHLLEPEEYHYLNQMTKKPLRQTWDDYYYDSEPQDSFSVEGEDLKHDFERLQLAMEMVGFLPMTRKRIFSLLSAILHLGNIKYKKKTYRDDSVDICNPEVLPIVSELLEVKEETLFEALTTRKTVTVGERLILPYRLSEAVTVRDSMAKSLYSALFDWIVFRINHALLNNRDLEEHKKILSIGVLDIFGFEDYENNSFEQFCINFANERLQHYFNQHIFKMEQEEYRSEGISWHNIDYIDNSGCINLISKKPTGLLHLLDEECNFPQATNQTLLDKFKRQYEGNNYIEFPTVMEQAFIIKHYAGKVKYQMKDFREKNTDHMRPDIVALLKSSKNAFICGLIGIDPVAVFRWSILRSFFRAAVAFREAGKRYVEKKPGHDDAVPFPVLKSVDSFSFLHHPVHQRSLEILQRCKEEKYSITRKSPRTPLSNLQGTNTINDKSPRDLHGTSWNGRTGIQAARHPSSHSLLDDEGIFLNSASTKLLERAHGILMRNRNSKTKPVLPKHLLDVKSLKYLGSLTLHDRITKSLLHLHKKKKTPSISAQFQASLNKLMETLGQAEPYFVKCIRSNAEKLPLRFNDHLVLRQLRYTGMLETVRIRQSGYSIKYSFQEFVTHFRVLLPRSTVSSQRSIGQFLRNVNLDTISYQVGKTMIFMKEIERQRLQDMLHKEVLTHIILLQSWFRAILERRQFLQMKQAAVIIQNYWRNYKLKQNHIYTDLSVLNAAATSIQAVWKGYRQRQMLMKMHDAAIVIQRCWHDYYRCRLAALCIQTHWRRYKEMQTYRAFRDSIIKIQAANRGFVVRRRFQALRRQKLKNKKQLDCEKKGNLNKQIPDENLPEIIRTDLNKFEDEANEIPTSKENDSEQTYSECNNNSVDLQGETYDFSDSTNVLQGVIVRERPKSLSGDPDKQKVVRAKRHSRRMRELEQAKFSLELLKVRSGGVSPSEEGRWSTELVSDSVNSLSPQGTPDSESSRGSFEVPSCEDGQKRKQSLTVSDDPVSDSNLHTTQDYLSTSPKPNDHSLSTGLKLDGKHLSSSSFYTNTNHTGLISTSPRSTNEEFSFHSPRSNSEDRSPSPRSRESLFSSPKPDYSLSTLLPNHDILSSSTKPNDTIIIGSDHYTVEGTIAEPKTERGEDGNTSLDQPLDGELSSIEDSAGTDPFPQIAVLERLERLNVQQAERQQQKQQQNEKEMMEQIRQQTEILEKQRKVFEKQEKDMFEKQRGDALQKIEQCRQNDSPLLPFRSPSKQADRPQSCLALHPEKKWDSTNYSDSHSISTIESKMLNTAEFFEHDNTLGHPGVKDRPISMFFEKKELQQSGQQEMNKLDGWTPKFSLEHREPVPGTEQSRQAKPQKGTANAREEFTDGNAKDRTNALFFLPKDKTTLSKLDKDSVNLEKSELSKGEQPFREKMVKTSLLKETDVARPVRKKKARMARTRSDFLTRGCNAEGEGESEDEEYDDPSADPPLSPDQPGSELRPKDSAGQACHSDSEMMQSTRNEDQRKLHKAQSQDELGRLDPVQGSNVPDGRAPLKGRMRFWGTRKQGEKKLSRDKLATQSELQELNMDQDIQGQPWKRELKPSETSLSLSLTEGKDGAFKGQDPIPPNPTPPRSPDLGLERGKEFKENKEPSPKVKRRRSVKISNVGLEPIQWQHDA…
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
location: complement(join(2971448..2971935,2972907..2973049,2974704..2974906,2977151..2977168,2984253..2984376,2985218..2985349,2986176..2986281,2987713..2987841,2988530..2988722,2989485..2989546,2990058..2990169,2992114..2992161,2998113..2998301,2998462..2998578,3001145..3001374,3002465..3002673,3006935..3007041,3016519..3016731,3017566..3017668,3023021..3024757,3025098..3025402,3027186..3027335,3028424..3028546,3029580..3029690,3031565..3031645,3033355..3033477,3040222..3040261,3041641..3041784,3053928..3054003,3056436..3056555,3061155..3061350,3063465..3063606,3069187..3069308,3094523..3094657,3095626..3095742,3101267..3101356,3102190..3102316,3105395..3105495,3110636..3110692,3113535..3113634,3117308..3117370,3125742..3125836,3218556..3219398))
location: region:2971448-3219398:-1
so has part: feature:3218556-3219398:-1:exon
so has part: feature:3125742-3125836:-1:exon
so has part: feature:3117308-3117370:-1:exon
so has part: feature:3113535-3113634:-1:exon
so has part: feature:3110636-3110692:-1:exon
so has part: feature:3105395-3105495:-1:exon
so has part: feature:3102190-3102316:-1:exon
so has part: feature:3101267-3101356:-1:exon
so has part: feature:3095626-3095742:-1:exon
so has part: feature:3094523-3094657:-1:exon
so has part: feature:3069187-3069308:-1:exon
so has part: feature:3063465-3063606:-1:exon
so has part: feature:3061155-3061350:-1:exon
so has part: feature:3056436-3056555:-1:exon
so has part: feature:3053928-3054003:-1:exon
so has part: feature:3041641-3041784:-1:exon
so has part: feature:3040222-3040261:-1:exon
so has part: feature:3033355-3033477:-1:exon
so has part: feature:3031565-3031645:-1:exon
so has part: feature:3029580-3029690:-1:exon
so has part: feature:3028424-3028546:-1:exon
so has part: feature:3027186-3027335:-1:exon
so has part: feature:3025098-3025402:-1:exon
so has part: feature:3023021-3024757:-1:exon
so has part: feature:3017566-3017668:-1:exon
so has part: feature:3016519-3016731:-1:exon
so has part: feature:3006935-3007041:-1:exon
so has part: feature:3002465-3002673:-1:exon
so has part: feature:3001145-3001374:-1:exon
so has part: feature:2998462-2998578:-1:exon
so has part: feature:2998113-2998301:-1:exon
so has part: feature:2992114-2992161:-1:exon
so has part: feature:2990058-2990169:-1:exon
so has part: feature:2989485-2989546:-1:exon
so has part: feature:2988530-2988722:-1:exon
so has part: feature:2987713-2987841:-1:exon
so has part: feature:2986176-2986281:-1:exon
so has part: feature:2985218-2985349:-1:exon
so has part: feature:2984253-2984376:-1:exon
so has part: feature:2977151-2977168:-1:exon
so has part: feature:2974704-2974906:-1:exon
so has part: feature:2972907-2973049:-1:exon
so has part: feature:2971448-2971935:-1:exon

XP_038640105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3218556-3219398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3125742-3125836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3117308-3117370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3113535-3113634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3110636-3110692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3105395-3105495:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3102190-3102316:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3101267-3101356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3095626-3095742:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3094523-3094657:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3069187-3069308:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3063465-3063606:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3061155-3061350:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3056436-3056555:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3053928-3054003:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3041641-3041784:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3040222-3040261:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3033355-3033477:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3031565-3031645:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3029580-3029690:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3028424-3028546:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3027186-3027335:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3025098-3025402:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3023021-3024757:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3017566-3017668:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3016519-3016731:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3006935-3007041:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3002465-3002673:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3001145-3001374:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2998462-2998578:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2998113-2998301:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2992114-2992161:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2990058-2990169:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2989485-2989546:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2988530-2988722:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2987713-2987841:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2986176-2986281:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2985218-2985349:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2984253-2984376:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2977151-2977168:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2974704-2974906:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2972907-2973049:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2971448-2971935:-1:exon

myo9aa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: myo9aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-IXAa isoform X1
translation: MNVHDVGGRRRYEDNEFTLRVYPGNIAECTIYCPVTARKNTSAAEVIETLIYKLQLEKAKCYVLAEVKEFGGEEWILNPTDCPVQRMMLWPRSALENRFSSEDYRFLLREKNLDGSIHYNNLQSWLRVTEERRIMMERGFLPQPPQKNYNDLCNLPDLNEKALLDNLRNRFKQEKIYTYVGTILIAINPFKFLPIYNPKYVKMYDNHPLGKLEPHIYAIADVAYHAMLQRKKNQCIVISGESGSGKTQSTNFLIHHLTALSQKGFASGVEQIILGAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYQETGTVRGAYVEKYLLEKSRLVYQEHNERNYHVFYYLLAGANEDEKKSFHLLEPEEYHYLNQMTKKPLRQTWDDYYYDSEPQDSFSVEGEDLKHDFERLQLAMEMVGFLPMTRKRIFSLLSAILHLGNIKYKKKTYRDDSVDICNPEVLPIVSELLEVKEETLFEALTTRKTVTVGERLILPYRLSEAVTVRDSMAKSLYSALFDWIVFRINHALLNNRDLEEHKKILSIGVLDIFGFEDYENNSFEQFCINFANERLQHYFNQHIFKMEQEEYRSEGISWHNIDYIDNSGCINLISKKPTGLLHLLDEECNFPQATNQTLLDKFKRQYEGNNYIEFPTVMEQAFIIKHYAGKVKYQMKDFREKNTDHMRPDIVALLKSSKNAFICGLIGIDPVAVFRWSILRSFFRAAVAFREAGKRYVEKKPGHDDAVPFPVLKSVDSFSFLHHPVHQRSLEILQRCKEEKYSITRKSPRTPLSNLQGTNTINDKSPRDLHGTSWNGRTGIQAARHPSSHSLLDDEGIFLNSASTKLLERAHGILMRNRNSKTKPVLPKHLLDVKSLKYLGSLTLHDRITKSLLHLHKKKKTPSISAQFQASLNKLMETLGQAEPYFVKCIRSNAEKLPLRFNDHLVLRQLRYTGMLETVRIRQSGYSIKYSFQEFVTHFRVLLPRSTVSSQRSIGQFLRNVNLDTISYQVGKTMIFMKEIERQRLQDMLHKEVLTHIILLQSWFRAILERRQFLQMKQAAVIIQNYWRNYKLKQNHIYTDLSVLNAAATSIQAVWKGYRQRQMLMKMHDAAIVIQRCWHDYYRCRLAALCIQTHWRRYKEMQTYRAFRDSIIKIQAANRGFVVRRRFQALRRQKLKNKKQLDCEKKGNLNKQIPDENLPEIIRTDLNKFEDEANEIPTSKENDSEQTYSECNNNSVDLQGETYDFSDSTNVLQGVIVRERPKSLSGDPDKQKVVRAKRHSRRMRELEQAKFSLELLKVRSGGVSPSEEGRWSTELVSDSVNSLSPQGTPDSESSRGSFEVPSCEDGQKRKQSLTVSDDPVSDSNLHTTQDYLSTSPKPNDHSLSTGLKLDGKHLSSSSFYTNTNHTGLISTSPRSTNEEFSFHSPRSNSEDRSPSPRSRESLFSSPKPDYSLSTLLPNHDILSSSTKPNDTIIIGSDHYTVEGTIAEPKTERGEDGNTSLDQPLDGELSSIEDSAGTDPFPQIAVLERLERLNVQQAERQQQKQQQNEKEMMEQIRQQTEILEKQRKVFEKQEKDMFEKQRGDALQKIEQCRQNDSPLLPFRSPSKQADRPQSCLALHPEKKWDSTNYSDSHSISTIESKMLNTAEFFEHDNTLGHPGVKDRPISMFFEKKELQQSGQQEMNKLDGWTPKFSLEHREPVPGTEQSRQAKPQKGTANAREEFTDGNAKDRTNALFFLPKDKTTLSKLDKDSVNLEKSELSKGEQPFREKMVKTSLLKETDVARPVRKKKARMARTRSDFLTRGCNAEGEGESEDEEYDDPSADPPLSPDQPGSELRPKDSAGQACHSDSEMMQSTRNEDQRKLHKAQSQDELGRLDPVQGSNVPDGRAPLKGRMRFWGTRKQGEKKLSRDKLATQSELQELNMDQDIQGQPWKRELKPSETSLSLSLTEGKDGAFKGQDPIPPNPTPPRSPDLGLERGKEFKENKEPSPKVKRRRSVKISNVGLEPIQWQHDA…
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
location: complement(join(2971448..2971935,2972907..2973049,2974704..2974906,2977151..2977168,2980826..2980879,2984253..2984376,2985218..2985349,2986176..2986281,2987713..2987841,2988530..2988722,2989485..2989546,2990058..2990169,2992114..2992161,2998113..2998301,2998462..2998578,3001145..3001374,3002465..3002673,3006935..3007041,3016519..3016731,3017566..3017668,3023021..3024757,3025098..3025402,3027186..3027335,3028424..3028546,3029580..3029690,3031565..3031645,3033355..3033477,3040222..3040261,3041641..3041784,3053928..3054003,3056436..3056555,3061155..3061350,3063465..3063606,3069187..3069308,3094523..3094657,3095626..3095742,3101267..3101356,3102190..3102316,3105395..3105495,3110636..3110692,3113535..3113634,3117308..3117370,3125742..3125836,3218556..3219398))
location: region:2971448-3219398:-1
so has part: feature:3218556-3219398:-1:exon
so has part: feature:3125742-3125836:-1:exon
so has part: feature:3117308-3117370:-1:exon
so has part: feature:3113535-3113634:-1:exon
so has part: feature:3110636-3110692:-1:exon
so has part: feature:3105395-3105495:-1:exon
so has part: feature:3102190-3102316:-1:exon
so has part: feature:3101267-3101356:-1:exon
so has part: feature:3095626-3095742:-1:exon
so has part: feature:3094523-3094657:-1:exon
so has part: feature:3069187-3069308:-1:exon
so has part: feature:3063465-3063606:-1:exon
so has part: feature:3061155-3061350:-1:exon
so has part: feature:3056436-3056555:-1:exon
so has part: feature:3053928-3054003:-1:exon
so has part: feature:3041641-3041784:-1:exon
so has part: feature:3040222-3040261:-1:exon
so has part: feature:3033355-3033477:-1:exon
so has part: feature:3031565-3031645:-1:exon
so has part: feature:3029580-3029690:-1:exon
so has part: feature:3028424-3028546:-1:exon
so has part: feature:3027186-3027335:-1:exon
so has part: feature:3025098-3025402:-1:exon
so has part: feature:3023021-3024757:-1:exon
so has part: feature:3017566-3017668:-1:exon
so has part: feature:3016519-3016731:-1:exon
so has part: feature:3006935-3007041:-1:exon
so has part: feature:3002465-3002673:-1:exon
so has part: feature:3001145-3001374:-1:exon
so has part: feature:2998462-2998578:-1:exon
so has part: feature:2998113-2998301:-1:exon
so has part: feature:2992114-2992161:-1:exon
so has part: feature:2990058-2990169:-1:exon
so has part: feature:2989485-2989546:-1:exon
so has part: feature:2988530-2988722:-1:exon
so has part: feature:2987713-2987841:-1:exon
so has part: feature:2986176-2986281:-1:exon
so has part: feature:2985218-2985349:-1:exon
so has part: feature:2984253-2984376:-1:exon
so has part: feature:2980826-2980879:-1:exon
so has part: feature:2977151-2977168:-1:exon
so has part: feature:2974704-2974906:-1:exon
so has part: feature:2972907-2973049:-1:exon
so has part: feature:2971448-2971935:-1:exon

XP_038640103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3218556-3219398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3125742-3125836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3117308-3117370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3113535-3113634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3110636-3110692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3105395-3105495:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3102190-3102316:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3101267-3101356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3095626-3095742:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3094523-3094657:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3069187-3069308:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3063465-3063606:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3061155-3061350:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3056436-3056555:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3053928-3054003:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3041641-3041784:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3040222-3040261:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3033355-3033477:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3031565-3031645:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3029580-3029690:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3028424-3028546:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3027186-3027335:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3025098-3025402:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3023021-3024757:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3017566-3017668:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3016519-3016731:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3006935-3007041:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3002465-3002673:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3001145-3001374:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2998462-2998578:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2998113-2998301:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2992114-2992161:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2990058-2990169:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2989485-2989546:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2988530-2988722:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2987713-2987841:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2986176-2986281:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2985218-2985349:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2984253-2984376:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2980826-2980879:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2977151-2977168:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2974704-2974906:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2972907-2973049:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2971448-2971935:-1:exon

LOC119956950
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956950
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 3158352..3158561
location: region:3158352-3158561:1
so has part: feature:3158352-3158561:1:exon

119956950
type: Gene
SIO_000068: ncbigene

position:3158352:1
position: 3158352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3158561:1
position: 3158561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3158352-3158561:1:exon

LOC119956950
type: Exon
subclass of: SO_0000147
RO_0002162: 7830
gene: LOC119956950
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC119956950
subclass of: SO_0000673
so part of: LOC119956950
location: 3158352..3158561
location: region:3158352-3158561:1
so has part: feature:3158352-3158561:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3158352-3158561:1:exon

LOC119956953
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956953
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 3159394..3159491
location: region:3159394-3159491:1
so has part: feature:3159394-3159491:1:exon

119956953
type: Gene
SIO_000068: ncbigene

position:3159394:1
position: 3159394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3159491:1
position: 3159491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3159394-3159491:1:exon

LOC119956953
type: Exon
subclass of: SO_0000147
RO_0002162: 7830
gene: LOC119956953
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC119956953
subclass of: SO_0000673
so part of: LOC119956953
location: 3159394..3159491
location: region:3159394-3159491:1
so has part: feature:3159394-3159491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3159394-3159491:1:exon

LOC119956969
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956969
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(3196867..3197018)
location: region:3196867-3197018:-1
so has part: feature:3196867-3197018:-1:exon

119956969
type: Gene
SIO_000068: ncbigene

position:3196867:-1
position: 3196867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3197018:-1
position: 3197018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3196867-3197018:-1:exon

LOC119956969
type: Exon
subclass of: SO_0000147
RO_0002162: 7830
gene: LOC119956969
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC119956969
subclass of: SO_0000673
so part of: LOC119956969
location: complement(3196867..3197018)
location: region:3196867-3197018:-1
so has part: feature:3196867-3197018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3196867-3197018:-1:exon

senp8
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: senp8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3264013..3268563
location: region:3264013-3268563:1
so has part: feature:3264013-3268563:1:exon
subclass of: SO_0000010

119956890
type: Gene
SIO_000068: ncbigene

position:3264013:1
position: 3264013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3268563:1
position: 3268563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3264013-3268563:1:exon

senp8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: senp8
product: SUMO peptidase family member, NEDD8 specific
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_038784441.1
SIO_010081: senp8
subclass of: SO_0000673
so part of: senp8
location: join(3264013..3264137,3267486..3268563)
location: region:3264013-3268563:1
so has part: feature:3264013-3264137:1:exon
so has part: feature:3267486-3268563:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3264013-3264137:1:exon

position:3264137:1
position: 3264137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3267486-3268563:1:exon

position:3267486:1
position: 3267486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

senp8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: senp8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sentrin-specific protease 8
translation: MDPVILSYHDSLVRRSDLSLLNPPNWLNDHIIAFAFEYFANEQYKELLDSSCFISPEVTQFIKCMASQEELAIFLEPLELPQKSLVFLAVNDNSVQAAGGSHWSLLFYNRDMNCFSHYDSCSNMNASHARQIARKLQHFLGTKSEVPFVEESAPVQKNSYDCGMYVVCNTEALCEQYLRRDHRPPVLVVTPAYITQKRVSWKRLIEHLSRK
SIO_010081: senp8
subclass of: SO_0000673
so part of: senp8
location: 3267493..3268128
location: region:3267493-3268128:1
so has part: feature:3267493-3268128:1:exon

XP_038640369.1
type: Protein
SIO_000068: ncbiprotein

position:3267493:1
position: 3267493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3268128:1
position: 3268128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3267493-3268128:1:exon

LOC119956713
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: LOC119956713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3276565..3394179
location: region:3276565-3394179:1
so has part: feature:3276565-3394179:1:exon
subclass of: SO_0000010

119956713
type: Gene
SIO_000068: ncbigene

position:3276565:1
position: 3276565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3394179:1
position: 3394179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3276565-3394179:1:exon

LOC119956713
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: LOC119956713
product: ras GTPase-activating-like protein IQGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038784050.1
SIO_010081: LOC119956713
subclass of: SO_0000673
so part of: LOC119956713
location: join(3276565..3276735,3284341..3284440,3318575..3318731,3319156..3319233,3321834..3321910,3325594..3325661,3327975..3328088,3328823..3329001,3330389..3330479,3332831..3332994,3333423..3333510,3335014..3335177,3337896..3338056,3339504..3339628,3345195..3345358,3348592..3348762,3348855..3348938,3350224..3350295,3352831..3352900,3353840..3354048,3355584..3355739,3357829..3357992,3359933..3360157,3364760..3364900,3368219..3368303,3370399..3370634,3372588..3372720,3373802..3373904,3376084..3376213,3377025..3377112,3377722..3377934,3386127..3386293,3387991..3388110,3391661..3391769,3393384..3394179)
location: region:3276565-3394179:1
so has part: feature:3276565-3276735:1:exon
so has part: feature:3284341-3284440:1:exon
so has part: feature:3318575-3318731:1:exon
so has part: feature:3319156-3319233:1:exon
so has part: feature:3321834-3321910:1:exon
so has part: feature:3325594-3325661:1:exon
so has part: feature:3327975-3328088:1:exon
so has part: feature:3328823-3329001:1:exon
so has part: feature:3330389-3330479:1:exon
so has part: feature:3332831-3332994:1:exon
so has part: feature:3333423-3333510:1:exon
so has part: feature:3335014-3335177:1:exon
so has part: feature:3337896-3338056:1:exon
so has part: feature:3339504-3339628:1:exon
so has part: feature:3345195-3345358:1:exon
so has part: feature:3348592-3348762:1:exon
so has part: feature:3348855-3348938:1:exon
so has part: feature:3350224-3350295:1:exon
so has part: feature:3352831-3352900:1:exon
so has part: feature:3353840-3354048:1:exon
so has part: feature:3355584-3355739:1:exon
so has part: feature:3357829-3357992:1:exon
so has part: feature:3359933-3360157:1:exon
so has part: feature:3364760-3364900:1:exon
so has part: feature:3368219-3368303:1:exon
so has part: feature:3370399-3370634:1:exon
so has part: feature:3372588-3372720:1:exon
so has part: feature:3373802-3373904:1:exon
so has part: feature:3376084-3376213:1:exon
so has part: feature:3377025-3377112:1:exon
so has part: feature:3377722-3377934:1:exon
so has part: feature:3386127-3386293:1:exon
so has part: feature:3387991-3388110:1:exon
so has part: feature:3391661-3391769:1:exon
so has part: feature:3393384-3394179:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3276565-3276735:1:exon

position:3276735:1
position: 3276735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3284341-3284440:1:exon

position:3284341:1
position: 3284341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3284440:1
position: 3284440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3318575-3318731:1:exon

position:3318575:1
position: 3318575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3318731:1
position: 3318731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3319156-3319233:1:exon

position:3319156:1
position: 3319156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3319233:1
position: 3319233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3321834-3321910:1:exon

position:3321834:1
position: 3321834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3321910:1
position: 3321910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3325594-3325661:1:exon

position:3325594:1
position: 3325594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3325661:1
position: 3325661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3327975-3328088:1:exon

position:3327975:1
position: 3327975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3328088:1
position: 3328088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3328823-3329001:1:exon

position:3328823:1
position: 3328823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3329001:1
position: 3329001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3330389-3330479:1:exon

position:3330389:1
position: 3330389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3330479:1
position: 3330479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3332831-3332994:1:exon

position:3332831:1
position: 3332831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3332994:1
position: 3332994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3333423-3333510:1:exon

position:3333423:1
position: 3333423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3333510:1
position: 3333510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3335014-3335177:1:exon

position:3335014:1
position: 3335014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3335177:1
position: 3335177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3337896-3338056:1:exon

position:3337896:1
position: 3337896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3338056:1
position: 3338056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3339504-3339628:1:exon

position:3339504:1
position: 3339504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3339628:1
position: 3339628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3345195-3345358:1:exon

position:3345195:1
position: 3345195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3345358:1
position: 3345358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3348592-3348762:1:exon

position:3348592:1
position: 3348592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3348762:1
position: 3348762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3348855-3348938:1:exon

position:3348855:1
position: 3348855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3348938:1
position: 3348938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3350224-3350295:1:exon

position:3350224:1
position: 3350224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3350295:1
position: 3350295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3352831-3352900:1:exon

position:3352831:1
position: 3352831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3352900:1
position: 3352900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3353840-3354048:1:exon

position:3353840:1
position: 3353840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3354048:1
position: 3354048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3355584-3355739:1:exon

position:3355584:1
position: 3355584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3355739:1
position: 3355739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3357829-3357992:1:exon

position:3357829:1
position: 3357829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3357992:1
position: 3357992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3359933-3360157:1:exon

position:3359933:1
position: 3359933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3360157:1
position: 3360157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3364760-3364900:1:exon

position:3364760:1
position: 3364760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3364900:1
position: 3364900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3368219-3368303:1:exon

position:3368219:1
position: 3368219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3368303:1
position: 3368303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3370399-3370634:1:exon

position:3370399:1
position: 3370399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3370634:1
position: 3370634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3372588-3372720:1:exon

position:3372588:1
position: 3372588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3372720:1
position: 3372720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3373802-3373904:1:exon

position:3373802:1
position: 3373802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3373904:1
position: 3373904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3376084-3376213:1:exon

position:3376084:1
position: 3376084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3376213:1
position: 3376213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3377025-3377112:1:exon

position:3377025:1
position: 3377025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3377112:1
position: 3377112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3377722-3377934:1:exon

position:3377722:1
position: 3377722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3377934:1
position: 3377934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:3386127-3386293:1:exon

position:3386127:1
position: 3386127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3386293:1
position: 3386293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:3387991-3388110:1:exon

position:3387991:1
position: 3387991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3388110:1
position: 3388110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:3391661-3391769:1:exon

position:3391661:1
position: 3391661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3391769:1
position: 3391769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:3393384-3394179:1:exon

position:3393384:1
position: 3393384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119956713
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7830
gene: LOC119956713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating-like protein IQGAP1
translation: MSTSEEADGLGAVRPHYGSVLDNERLTAEEMDERRRQNIAYEYLCHLEEAKRWMEACLDEELPPTTELEEGMRNGVYLAKLGNFFSPKVVSLKKIYDCEQTRYRATGLHFRHTDNTIQWFNAMSNIGLPKIFYPETTDIYDRKNMPRCIYCVHALSLYLFKLGLAPQIQDLYGKVAFTEEEINNMKKELEKYGIQMPAFSKIGGILANELSVDEAALHAAVIAINDAVEKGVPAETLTAMKNPNAMLVNLDSAQSQQYQNTLSAAKQEKMTNARNKGAPGSPQEERDAYEELLTQAEIQGNVNKVNLQNCLKNVDGALDQGDGTVLYNALKSPALGLRDVGLDNCDWYLKQLSSDRQLKAQEQGSTEPLTKEELQFGVEQGNQSAQRFRKMLEAVSRINAAIRKGVAEDTVSELMNHDAQLPEVHPFAAKLYQQELSTLQQQSHQGNLTHAELAVAVEMLSSVAMINRALEAGDMNGVWRKIQNPVTGLTNVDDGNGQRYVDELMRMKAKAGAEGNDFLTWNDIQASVDQVNVVVQEEHDRIKAIGLINEAVDEGDSQKTLKALLLPSAKLADVSSPVAEHYQETLIRTKREKAQSTISGVTAAYNREQLWVANETLITKLQARCRGYLVRRGYSDRLNFLRKQQPAILTIQSKWRGHKQAQAYKKRLQYLKDNADSAVKIQSLVRMHQAKKRYQDRMKYFKDHEPDIVKIQAFIRANKARDDYKTLISAEQPPMAVVRKFVHLLDQSDQDFQEEVEMMRLREEVVTRIRSNQQLENDLNMMDIKIGLLVKNKITLQEVVSHSKKLTRKNKGQLSDMMQINKQKGGLKALSKEKRMKLEAYQNLFYLLQTNPTYLAKLIFQMPQNKSTKFMDSVIFTLYNYASNQREEYLLLKLFKTALQEEIKSKVDQLHEIITGNPTVIKMVVSFNRGARGQNALRQILAPVVKEIIEERSMNIKTDPVDIYKAWVNQMESQTGEASKLPYDVTPDQALSHEEVKLRLDTSIKNMRAITDKFLSAIVTSVDKIPYGMRLIAKVLKDSLHEKFPDATDDELIKIIGNLLYYRYMNPAIVAPDAFDIIDISAGGGGLTTDQRRNLGSIAKVLQHAASSKLFDKENCHLGSVNDYLSQAHMKFRRFFQAACEVPELEDRFNVDEYSDLVTLTKPVIYISIGEIINTHTLFLDHQDAIAPEHNDPIHELLEDLGEVPTIESLIGEGGVHDPNKEQLAKTEVSLTLTNKFDVQGGEDEEMNARTLLLNTKRLIVDVIRFQPGETLTEILETPASAEQDTDHQRAMQRRTIRDAKTPEKMKRDQVQSEENQMSLKEKKERIEQSLKKLATLGKVNPQNKYQDLINDVAKDIRNQRRYRQRRKAELVRLQQTYSGLISKTTFFEEQIDYYNQYIKTCMDNLASKGKVSKKPDVKGKKSKQVSQRYTAARLHEKGVLLEIEDLSSNQFKNVIFDICPTEEVGDFEVKAKFMGVQMDSYMLHYQDLLQLQYEGVAVMKLFDKAKVNVNLLIFLLNKKFYGK
SIO_010081: LOC119956713
subclass of: SO_0000673
so part of: LOC119956713
location: join(3276681..3276735,3284341..3284440,3318575..3318731,3319156..3319233,3321834..3321910,3325594..3325661,3327975..3328088,3328823..3329001,3330389..3330479,3332831..3332994,3333423..3333510,3335014..3335177,3337896..3338056,3339504..3339628,3345195..3345358,3348592..3348762,3348855..3348938,3350224..3350295,3352831..3352900,3353840..3354048,3355584..3355739,3357829..3357992,3359933..3360157,3364760..3364900,3368219..3368303,3370399..3370634,3372588..3372720,3373802..3373904,3376084..3376213,3377025..3377112,3377722..3377934,3386127..3386293,3387991..3388110,3391661..3391769,3393384..3393497)
location: region:3276681-3393497:1
so has part: feature:3276681-3276735:1:exon
so has part: feature:3284341-3284440:1:exon
so has part: feature:3318575-3318731:1:exon
so has part: feature:3319156-3319233:1:exon
so has part: feature:3321834-3321910:1:exon
so has part: feature:3325594-3325661:1:exon
so has part: feature:3327975-3328088:1:exon
so has part: feature:3328823-3329001:1:exon
so has part: feature:3330389-3330479:1:exon
so has part: feature:3332831-3332994:1:exon
so has part: feature:3333423-3333510:1:exon
so has part: feature:3335014-3335177:1:exon
so has part: feature:3337896-3338056:1:exon
so has part: feature:3339504-3339628:1:exon
so has part: feature:3345195-3345358:1:exon
so has part: feature:3348592-3348762:1:exon
so has part: feature:3348855-3348938:1:exon
so has part: feature:3350224-3350295:1:exon
so has part: feature:3352831-3352900:1:exon
so has part: feature:3353840-3354048:1:exon
so has part: feature:3355584-3355739:1:exon
so has part: feature:3357829-3357992:1:exon
so has part: feature:3359933-3360157:1:exon
so has part: feature:3364760-3364900:1:exon
so has part: feature:3368219-3368303:1:exon
so has part: feature:3370399-3370634:1:exon
so has part: feature:3372588-3372720:1:exon
so has part: feature:3373802-3373904:1:exon
so has part: feature:3376084-3376213:1:exon
so has part: feature:3377025-3377112:1:exon
so has part: feature:3377722-3377934:1:exon
so has part: feature:3386127-3386293:1:exon
so has part: feature:3387991-3388110:1:exon
so has part: feature:3391661-3391769:1:exon
so has part: feature:3393384-3393497:1:exon

XP_038639978.1
type: Protein
SIO_000068: ncbiprotein

position:3276681:1
position: 3276681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3393497:1
position: 3393497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3276681-3276735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3284341-3284440:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3318575-3318731:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3319156-3319233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3321834-3321910:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3325594-3325661:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3327975-3328088:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3328823-3329001:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3330389-3330479:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3332831-3332994:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3333423-3333510:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3335014-3335177:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3337896-3338056:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3339504-3339628:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3345195-3345358:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3348592-3348762:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3348855-3348938:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3350224-3350295:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3352831-3352900:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3353840-3354048:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3355584-3355739:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3357829-3357992:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3359933-3360157:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3364760-3364900:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3368219-3368303:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3370399-3370634:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3372588-3372720:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3373802-3373904:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3376084-3376213:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3377025-3377112:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3377722-3377934:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3386127-3386293:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3387991-3388110:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:3391661-3391769:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:3393384-3393497:1:exon

crtc3
type: Gene
subclass of: SO_0000704
RO_0002162: 7830
gene: crtc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3416444..3501288
location: region:3416444-3501288:1
so has part: feature:3416444-3501288:1:exon
subclass of: SO_0000010

119956947
type: Gene
SIO_000068: ncbigene

position:3416444:1
position: 3416444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3501288:1
position: 3501288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3416444-3501288:1:exon

crtc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7830
gene: crtc3
product: CREB regulated transcription coactivator 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_038784541.1
SIO_010081: crtc3
subclass of: SO_0000673
so part of: crtc3
location: join(3416444..3416698,3434236..3434346,3458261..3458395,3468821..3468882,3479475..3479540,3480917..3481020,3485099..3485134,3486891..3486976,3489315..3489364,3490204..3490421,3492148..3492440,3492788..3492967,3495294..3495377,3497612..3497813,3500734..3501288)
location: region:3416444-3501288:1
so has part: feature:3416444-3416698:1:exon
so has part: feature:3434236-3434346:1:exon
so has part: feature:3458261-3458395:1:exon
so has part: feature:3468821-3468882:1:exon
so has part: feature:3479475-3479540:1:exon
so has part: feature:3480917-3481020:1:exon
so has part: feature:3485099-3485134:1:exon
so has part: feature:3486891-3486976:1:exon
so has part: feature:3489315-3489364:1:exon
so has part: feature:3490204-3490421:1:exon
so has part: feature:3492148-3492440:1:exon
so has part: feature:3492788-3492967:1:exon
so has part: feature:3495294-3495377:1:exon
so has part: feature:3497612-3497813:1:exon
so has part: feature:3500734-3501288:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3416444-3416698:1:exon

position:3416698:1
position: 3416698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3434236-3434346:1:exon

position:3434236:1
position: 3434236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3434346:1
position: 3434346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3458261-3458395:1:exon

position:3458261:1
position: 3458261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3458395:1
position: 3458395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3468821-3468882:1:exon

position:3468821:1
position: 3468821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3468882:1
position: 3468882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition