Ehrlichia ruminantium strain Springbokfontein7 chromosome, complete genome.
Ehrlichia ruminantium (heartwater rickettsia)
Bacteria; Pseudomonadota; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Ehrlichia.
Whole genome sequences of 10 Erhlichia ruminantium isolates
Submitted (07-MAY-2019) Vaccines and Diagnostics Development, ARC - Onderstepoort Veterinary Research, Soutpan Road, Pretoria 0110, South Africa
REFSEQ INFORMATION: The reference sequence is identical to\nCP040111.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: CLC NGS Cell v. 7\nGenome Representation :: Full\nExpected Final Version :: Yes\nReference-guided Assembly :: NC_005295.2 Ehrlichia ruminantium\n Welgevonden\nGenome Coverage :: 431x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/28/2023 03:53:33\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 985\nCDSs (total) :: 942\nGenes (coding) :: 926\nCDSs (with protein) :: 926\nGenes (RNA) :: 43\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 36\nncRNAs :: 4\nPseudo Genes (total) :: 16\nCDSs (without protein) :: 16\nPseudo Genes (ambiguous residues) :: 0 of 16\nPseudo Genes (frameshifted) :: 4 of 16\nPseudo Genes (incomplete) :: 16 of 16\nPseudo Genes (internal stop) :: 2 of 16\nPseudo Genes (multiple problems) :: 6 of 16\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
South Africa: Limpopo province, farm Springbokfontein
COORDINATES: similar to AA sequence:RefSeq:WP_011154685.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_006010398.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255982.1
pyrroline-5-carboxylate reductase dimerization domain-containing protein
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_011154688.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154689.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_011255984.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154691.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_011255986.1
COORDINATES: similar to AA sequence:RefSeq:WP_011304131.1
COORDINATES: similar to AA sequence:RefSeq:WP_015816587.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154695.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255990.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154697.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_011154698.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_011154699.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_011255222.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154701.1
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011452360.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255225.1
GO:0044423 - virion component [Evidence IEA]
GO:0008233 - peptidase activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA]
GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255226.1
GO:0005198 - structural molecule activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154705.1
GO:0008168 - methyltransferase activity [Evidence IEA]
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011255991.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154707.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154708.1
COORDINATES: similar to AA sequence:RefSeq:WP_011304147.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011154710.1
GO:0043684 - type IV secretion system complex [Evidence IEA]
GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154711.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154712.1
P-type conjugative transfer protein VirB9
COORDINATES: similar to AA sequence:RefSeq:WP_011154713.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255232.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154715.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255233.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255234.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154718.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255235.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004618 - phosphoglycerate kinase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154720.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025118.2
GO:0003676 - nucleic acid binding [Evidence IEA]
Replication, recombination and repair (L.COG1570)
COORDINATES: similar to AA sequence:RefSeq:WP_011255236.1
COORDINATES: similar to AA sequence:RefSeq:WP_006010701.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154722.1
GO:0008666 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity [Evidence IEA]
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011154723.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_011255240.1
phosphopantothenoylcysteine decarboxylase
COORDINATES: similar to AA sequence:RefSeq:WP_011154725.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154726.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_011154727.1
TraR/DksA family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011154728.1
GO:0015232 - heme transmembrane transporter activity [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]; GO:0015886 - heme transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006010779.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_011154730.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011154731.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF012688.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255245.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255246.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154734.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154735.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255250.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154737.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255251.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011154739.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154740.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154741.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011154742.1
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011154743.1
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154744.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154745.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006010214.1
GO:0003870 - 5-aminolevulinate synthase activity [Evidence IEA]
GO:0006783 - heme biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154747.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255257.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154749.1
COORDINATES: similar to AA sequence:RefSeq:WP_011256001.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154751.1
GO:0045254 - pyruvate dehydrogenase complex [Evidence IEA]
GO:0004742 - dihydrolipoyllysine-residue acetyltransferase activity [Evidence IEA]; GO:0004738 - pyruvate dehydrogenase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011154752.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255263.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255264.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154756.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154757.1
converts ATP and xanthosine 5'-phosphate and L-glutamine and water to AMP and pyrophosphate diphosphate and GMP and L-glutamate
COORDINATES: similar to AA sequence:RefSeq:WP_011255266.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154759.1
GO:0046912 - acyltransferase activity, acyl groups converted into alkyl on transfer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154760.1
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154761.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154762.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011255272.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
3,4-dihydroxy-2-butanone-4-phosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011255273.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154765.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154766.1
COORDINATES: similar to AA sequence:RefSeq:WP_006010112.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154768.1
heme biosynthesis HemY N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011255276.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154770.1
GO:0042953 - lipoprotein transport [Evidence IEA]
lipoprotein-releasing ABC transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011154771.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154772.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154773.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154774.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154775.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154776.1
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
50S ribosomal protein L25/general stress protein Ctc
COORDINATES: similar to AA sequence:RefSeq:WP_011154777.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255284.1
GO:0009014 - succinyl-diaminopimelate desuccinylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154779.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation:proton antiporter-2 (CPA2) family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006010618.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154781.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154782.1
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
pyruvate dehydrogenase complex E1 component subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011154783.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255290.1
GO:0008237 - metallopeptidase activity [Evidence IEA]
Translation, ribosomal structure and biogenesis (J.COG0012)
COORDINATES: similar to AA sequence:RefSeq:WP_011154785.1
COORDINATES: similar to AA sequence:RefSeq:WP_044157211.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011255293.1
GO:0070567 - cytidylyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154788.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255295.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154790.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: similar to AA sequence:RefSeq:WP_006010160.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154792.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0006417 - regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011304237.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154794.1
COORDINATES: protein motif:HMM:NF033393.0
COORDINATES: similar to AA sequence:RefSeq:WP_011255300.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255301.1
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255302.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: similar to AA sequence:RefSeq:WP_011154799.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154800.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154801.1
Replication, recombination and repair (L.COG4974)
COORDINATES: similar to AA sequence:RefSeq:WP_011154802.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154803.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255307.1
GO:0004471 - malate dehydrogenase (decarboxylating) (NAD+) activity [Evidence IEA]; GO:0004470 - malic enzyme activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154805.1
AsmA-like C-terminal region-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011255309.1
GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154808.1
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011255311.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154810.1
GO:0015914 - phospholipid transport [Evidence IEA]
outer membrane lipid asymmetry maintenance protein MlaD
COORDINATES: similar to AA sequence:RefSeq:WP_011255312.1
GO:0032981 - mitochondrial respiratory chain complex I assembly [Evidence IEA]
NADH-ubiquinone oxidoreductase subunit NDUFA12 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011154812.1
GO:0140110 - transcription regulator activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154813.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154814.1
COORDINATES: similar to AA sequence:RefSeq:WP_017531837.1
Fe(3+) ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011154816.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255317.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154818.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255318.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_011154820.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011154821.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154822.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011452452.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154824.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154825.1
COORDINATES: similar to AA sequence:RefSeq:WP_006013306.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255323.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255324.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154829.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255326.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154831.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154832.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154833.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_011255330.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154835.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154836.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011154837.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154838.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006010386.1
GO:0031966 - mitochondrial membrane [Evidence IEA]
GO:0033617 - mitochondrial cytochrome c oxidase assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255332.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016703 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154841.1
GO:0009055 - electron transfer activity [Evidence IEA]
cytochrome b/b6 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011255334.1
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015589135.1
GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
HlyD family type I secretion periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011154844.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255337.1
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154846.1
COORDINATES: similar to AA sequence:RefSeq:WP_011304288.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154848.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154849.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006011505.1
COORDINATES: similar to AA sequence:RefSeq:WP_006011509.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154851.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_011154852.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154853.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011452917.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006010859.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255344.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011154857.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_011154858.1
GO:0008710 - 8-amino-7-oxononanoate synthase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011452912.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154860.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154861.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154862.1
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154863.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154864.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154865.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]
quinone-dependent dihydroorotate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_006010567.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154867.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255354.1
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011154869.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011256022.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255356.1
COORDINATES: similar to AA sequence:RefSeq:WP_011256023.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011452894.1
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Energy production and conversion (C.COG2009)
COORDINATES: similar to AA sequence:RefSeq:WP_011255359.1
GO:0045282 - plasma membrane succinate dehydrogenase complex [Evidence IEA]
GO:0000104 - succinate dehydrogenase activity [Evidence IEA]
succinate dehydrogenase, cytochrome b556 subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011255360.1
succinate dehydrogenase, hydrophobic membrane anchor protein
COORDINATES: similar to AA sequence:RefSeq:WP_011255361.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154877.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_011255363.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154879.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
Translation, ribosomal structure and biogenesis (J.COG0522)
COORDINATES: similar to AA sequence:RefSeq:WP_011255365.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006011805.1
GO:0005506 - iron ion binding [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255367.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255368.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154884.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255370.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154886.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_011452885.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_011154888.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
Translation, ribosomal structure and biogenesis (J.COG0223)
COORDINATES: similar to AA sequence:RefSeq:WP_011255372.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255373.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006010485.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]; GO:0006468 - protein phosphorylation [Evidence IEA]
pyruvate, water dikinase regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_011154892.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011304337.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154894.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255376.1
DNA translocase FtsK 4TM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011154896.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154897.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011304342.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154899.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255380.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154901.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154902.1
GO:0000035 - acyl binding [Evidence IEA]; GO:0000036 - acyl carrier activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255382.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154904.1
COORDINATES: similar to AA sequence:RefSeq:WP_011256695.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255384.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154907.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154908.1
demethoxyubiquinone hydroxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011154909.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154910.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154911.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255390.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154913.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255392.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154915.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154916.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154917.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154918.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154919.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154920.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154921.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154922.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154923.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154924.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154925.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255408.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_006010070.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011304363.1
Posttranslational modification, protein turnover, chaperones (O.COG0326)
COORDINATES: similar to AA sequence:RefSeq:WP_011255411.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255412.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154931.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154932.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154933.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154934.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154935.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154936.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011452850.1
GO:0006749 - glutathione metabolic process [Evidence IEA]
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011154938.1
protein-disulfide reductase DsbD family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011154939.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154940.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
twin-arginine translocase TatA/TatE family subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011304372.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154942.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
metal ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011154943.1
metal ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011154944.1
GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen [Evidence IEA]
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154945.1
COORDINATES: similar to AA sequence:RefSeq:WP_044156935.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_011154947.1
glycoside hydrolase TIM-barrel-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011154948.1
COORDINATES: similar to AA sequence:RefSeq:WP_011256039.1
GO:0004591 - oxoglutarate dehydrogenase (succinyl-transferring) activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
2-oxoglutarate dehydrogenase E1 component
COORDINATES: similar to AA sequence:RefSeq:WP_011255428.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154951.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011154952.1
histidine triad nucleotide-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011154953.1
COORDINATES: similar to AA sequence:RefSeq:WP_011304385.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
Translation, ribosomal structure and biogenesis (J.COG0621)
COORDINATES: similar to AA sequence:RefSeq:WP_011256041.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255432.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255433.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154957.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255435.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255436.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154960.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255438.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154962.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154963.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255441.1
Carbohydrate transport and metabolism (G.COG0477)
COORDINATES: similar to AA sequence:RefSeq:WP_011154965.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154966.1
COORDINATES: similar to AA sequence:RefSeq:WP_011304391.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006009777.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255446.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_011154970.1
GO:0004318 - enoyl-[acyl-carrier-protein] reductase (NADH) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154971.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
chromosomal replication initiator protein DnaA
COORDINATES: protein motif:HMM:NF017135.2
GO:0050080 - malonyl-CoA decarboxylase activity [Evidence IEA]
malonyl-CoA decarboxylase family protein
COORDINATES: protein motif:HMM:NF014930.2
COORDINATES: similar to AA sequence:RefSeq:WP_011255449.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154973.1
nicotinate-nicotinamide nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011154974.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154975.1
GO:0030261 - chromosome condensation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255451.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255452.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255453.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011154979.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154980.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154981.1
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_006011281.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154983.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011154984.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255461.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154986.1
GO:0008254 - 3'-nucleotidase activity [Evidence IEA]; GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]
Posttranslational modification, protein turnover, chaperones (O.COG2332)
COORDINATES: similar to AA sequence:RefSeq:WP_011154987.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154988.1
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010403557.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011154989.1
COORDINATES: similar to AA sequence:RefSeq:WP_006010877.1
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255466.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154992.1
transcription antitermination protein NusB
COORDINATES: similar to AA sequence:RefSeq:WP_011154993.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011256053.1
GO:0032977 - membrane insertase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011154995.1
GO:0005416 - amino acid:monoatomic cation symporter activity [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]
Lipid transport and metabolism (I.COG1183)
COORDINATES: similar to AA sequence:RefSeq:WP_011154996.1
phosphatidylcholine/phosphatidylserine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011154997.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154998.1
COORDINATES: similar to AA sequence:RefSeq:WP_011154999.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155000.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255475.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155002.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
PleD family two-component system response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011155003.1
GO:0015031 - protein transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255477.1
GO:0004352 - glutamate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0019551 - glutamate catabolic process to 2-oxoglutarate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155005.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155006.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255479.1
COORDINATES: similar to AA sequence:RefSeq:WP_011452799.1
GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
ribonucleotide-diphosphate reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011255482.1
COORDINATES: similar to AA sequence:RefSeq:WP_011256056.1
COORDINATES: similar to AA sequence:RefSeq:WP_006010029.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255485.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155013.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155014.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
Lipid transport and metabolism (I.COG1947)
COORDINATES: similar to AA sequence:RefSeq:WP_011255487.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
Inorganic ion transport and metabolism (P.COG1324)
COORDINATES: similar to AA sequence:RefSeq:WP_011255488.1
GO:0010038 - response to metal ion [Evidence IEA]
Signal transduction mechanisms (T.COG0642)
COORDINATES: similar to AA sequence:RefSeq:WP_011255489.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155018.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006010021.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155020.1
bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
COORDINATES: similar to AA sequence:RefSeq:WP_011155021.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155022.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255495.1
ClpXP protease specificity-enhancing factor SspB
COORDINATES: nucleotide motif:Rfam:14.4:RF01849
alphaproteobacterial-type; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_011155024.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155025.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155026.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255499.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011155028.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011304453.1
GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255501.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011255502.1
COORDINATES: similar to AA sequence:RefSeq:WP_006010433.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_011155033.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006010429.1
COORDINATES: similar to AA sequence:RefSeq:WP_011304459.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011256060.1
COORDINATES: similar to AA sequence:RefSeq:WP_006010419.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255506.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155039.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155040.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155041.1
COORDINATES: similar to AA sequence:RefSeq:WP_006009841.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155042.1
COORDINATES: similar to AA sequence:RefSeq:WP_011256065.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155043.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155044.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155045.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155046.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011155047.1
YebC/PmpR family DNA-binding transcriptional regulator
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_011255517.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008841 - dihydrofolate synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004326 - tetrahydrofolylpolyglutamate synthase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
folylpolyglutamate synthase/dihydrofolate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011255518.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006009859.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006011182.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_011155053.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoI
COORDINATES: similar to AA sequence:RefSeq:WP_011155054.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155055.1
COORDINATES: similar to AA sequence:RefSeq:WP_006009867.1
GO:0016793 - triphosphoric monoester hydrolase activity [Evidence IEA]
deoxyguanosinetriphosphate triphosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_011155057.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155058.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155059.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255526.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255527.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255528.1
GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
COORDINATES: similar to AA sequence:RefSeq:WP_011155063.1
GO:0008853 - exodeoxyribonuclease III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155064.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155066.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_011255533.1
GO:0003842 - 1-pyrroline-5-carboxylate dehydrogenase activity [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0004657 - proline dehydrogenase activity [Evidence IEA]
GO:0010133 - proline catabolic process to glutamate [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
COORDINATES: similar to AA sequence:RefSeq:WP_011155068.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155069.1
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]
adenosylmethionine--8-amino-7-oxononanoate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_011155070.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255537.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155072.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155073.1
COORDINATES: similar to AA sequence:RefSeq:WP_006011730.1
GO:0016032 - viral process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155076.1
COORDINATES: similar to AA sequence:RefSeq:WP_006011728.1
COORDINATES: similar to AA sequence:RefSeq:WP_011452741.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155079.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: similar to AA sequence:RefSeq:WP_011155080.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155081.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255544.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255545.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155084.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255547.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_011155086.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155087.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011155088.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_011155089.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155090.1
COORDINATES: similar to AA sequence:RefSeq:WP_007548577.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255553.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255554.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155093.1
GO:0008689 - 3-demethylubiquinone-9 3-O-methyltransferase activity [Evidence IEA]
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG
COORDINATES: similar to AA sequence:RefSeq:WP_011256574.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011155094.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155095.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155096.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0044571 - [2Fe-2S] cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255559.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155099.1
iron-sulfur cluster assembly accessory protein
COORDINATES: similar to AA sequence:RefSeq:WP_011255560.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255561.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155102.1
ferredoxin family 2Fe-2S iron-sulfur cluster binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011155103.1
COORDINATES: similar to AA sequence:RefSeq:WP_011256079.1
cytochrome c-type biogenesis protein CcmH
Translation, ribosomal structure and biogenesis (J.COG1384)
COORDINATES: similar to AA sequence:RefSeq:WP_011255564.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155106.1
GO:0019867 - outer membrane [Evidence IEA]
outer membrane protein assembly factor BamE
COORDINATES: similar to AA sequence:RefSeq:WP_011155107.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155108.1
GO:0016597 - amino acid binding [Evidence IEA]; GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0006520 - amino acid metabolic process [Evidence IEA]
aspartate carbamoyltransferase catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010264606.1
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_017532424.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255570.1
GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
GO:0006120 - mitochondrial electron transport, NADH to ubiquinone [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoG
COORDINATES: similar to AA sequence:RefSeq:WP_011155112.1
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoH
COORDINATES: similar to AA sequence:RefSeq:WP_011255571.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255573.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255574.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
COORDINATES: similar to AA sequence:RefSeq:WP_011155116.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155117.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155118.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155119.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
Catalyzes the reversible oxidation of malate to oxaloacetate; frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011155120.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255579.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155122.1
COORDINATES: similar to AA sequence:RefSeq:WP_011452720.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155124.1
NADH-quinone oxidoreductase subunit NuoE
COORDINATES: similar to AA sequence:RefSeq:WP_011256090.1
COORDINATES: similar to AA sequence:RefSeq:WP_011256088.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155126.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155127.1
GO:0016874 - ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155128.1
GO:0015288 - porin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017442440.1
carboxyl transferase domain-containing protein
Amino acid transport and metabolism (E.COG0548)
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011452704.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_011452706.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155132.1
dicarboxylate/amino acid:cation symporter
COORDINATES: similar to AA sequence:RefSeq:WP_011255591.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155134.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255592.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255593.1
GO:0004109 - coproporphyrinogen oxidase activity [Evidence IEA]
oxygen-dependent coproporphyrinogen oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_011256091.1
COORDINATES: similar to AA sequence:RefSeq:WP_011256092.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155139.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155140.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155141.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255597.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155143.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155144.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155146.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155147.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255603.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255604.1
GO:0019843 - rRNA binding [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155150.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155151.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255606.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255607.1
Lipid transport and metabolism (I.COG0821)
COORDINATES: similar to AA sequence:RefSeq:WP_011155154.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011155155.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155156.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011255611.1
GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155158.1
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155159.1
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155160.1
NADH-quinone oxidoreductase subunit NuoK
COORDINATES: similar to AA sequence:RefSeq:WP_011155161.1
Energy production and conversion (C.COG1894)
COORDINATES: similar to AA sequence:RefSeq:WP_011155162.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: similar to AA sequence:RefSeq:WP_011304602.1
COORDINATES: similar to AA sequence:RefSeq:WP_006010552.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155165.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155166.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155167.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_011155168.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
Posttranslational modification, protein turnover, chaperones (O.COG1225)
COORDINATES: similar to AA sequence:RefSeq:WP_011155169.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155170.1
16S rRNA (uracil(1498)-N(3))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011155171.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_044157001.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
Replication, recombination and repair (L.COG1381)
COORDINATES: similar to AA sequence:RefSeq:WP_006010978.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155174.1
COORDINATES: similar to AA sequence:RefSeq:WP_011452661.1
COORDINATES: protein motif:HMM:NF014860.2
COORDINATES: similar to AA sequence:RefSeq:WP_011255626.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_011155176.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155177.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011155178.1
GO:0009030 - thiamine-phosphate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155179.1
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155180.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255632.1
Energy production and conversion (C.COG2857)
COORDINATES: similar to AA sequence:RefSeq:WP_011155182.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010264938.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155184.1
GO:0045275 - respiratory chain complex III [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0008121 - ubiquinol-cytochrome-c reductase activity [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
ubiquinol-cytochrome c reductase iron-sulfur subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011155185.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255637.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255638.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155188.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155189.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155190.1
GO:0000917 - division septum assembly [Evidence IEA]
Translation, ribosomal structure and biogenesis (J.COG0361)
COORDINATES: similar to AA sequence:RefSeq:WP_011155191.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155192.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011452646.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255644.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155195.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_011255646.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255647.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011155198.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0050992 - dimethylallyl diphosphate biosynthetic process [Evidence IEA]; GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_011450508.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255650.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155201.1
GO:0030255 - protein secretion by the type IV secretion system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155202.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155203.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155204.1
COORDINATES: similar to AA sequence:RefSeq:WP_011304647.1
VirB4 family type IV secretion/conjugal transfer ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_011155206.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155207.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004784 - superoxide dismutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155208.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155209.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155210.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155211.1
COORDINATES: similar to AA sequence:RefSeq:WP_011304653.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011255661.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155214.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155215.1
COORDINATES: similar to AA sequence:RefSeq:WP_011452631.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255665.1
Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26; Derived by automated computational analysis using gene prediction method: Protein Homology.
gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011155218.1
GO:0004852 - uroporphyrinogen-III synthase activity [Evidence IEA]
GO:0006782 - protoporphyrinogen IX biosynthetic process [Evidence IEA]; GO:0006780 - uroporphyrinogen III biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155219.1
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011452628.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
TIGR02281 family clan AA aspartic protease
COORDINATES: similar to AA sequence:RefSeq:WP_011255669.1
COORDINATES: similar to AA sequence:RefSeq:WP_011452627.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255671.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155224.1
subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF022670.2
COORDINATES: similar to AA sequence:RefSeq:WP_011155225.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255679.1
type II toxin-antitoxin system RatA family toxin
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
COORDINATES: similar to AA sequence:RefSeq:WP_011155230.1
COORDINATES: similar to AA sequence:RefSeq:WP_006010962.1
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155232.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155233.1
COORDINATES: similar to AA sequence:RefSeq:WP_011256124.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155235.1
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation/H(+) antiporter subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_011452621.1
GO:0015075 - monoatomic ion transmembrane transporter activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
monovalent cation/H+ antiporter complex subunit F
COORDINATES: similar to AA sequence:RefSeq:WP_011255687.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155238.1
Carbohydrate transport and metabolism (G.COG0021)
COORDINATES: similar to AA sequence:RefSeq:WP_011155240.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155241.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155242.1
GO:0042834 - peptidoglycan binding [Evidence IEA]; GO:0015288 - porin activity [Evidence IEA]
Nucleotide transport and metabolism (F.COG0104)
COORDINATES: similar to AA sequence:RefSeq:WP_011155243.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255694.1
COORDINATES: similar to AA sequence:RefSeq:WP_015588334.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011155246.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255697.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011255698.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155249.1
COORDINATES: similar to AA sequence:RefSeq:WP_011304685.1
GO:0052717 - tRNA-specific adenosine-34 deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155250.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155251.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011304686.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0033818 - beta-ketoacyl-acyl-carrier-protein synthase III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006011401.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155254.1
COORDINATES: similar to AA sequence:RefSeq:WP_011256128.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155256.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_011155257.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_011155258.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155259.1
GO:0008412 - 4-hydroxybenzoate octaprenyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005980833.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255707.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255708.1
GO:0015655 - alanine:sodium symporter activity [Evidence IEA]
GO:0032328 - alanine transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011304698.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155264.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155265.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011256130.1
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011304702.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155268.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255712.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155270.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255713.1
COORDINATES: similar to AA sequence:RefSeq:WP_011452593.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155273.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255715.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155275.1
COORDINATES: similar to AA sequence:RefSeq:WP_011304711.1
Translation, ribosomal structure and biogenesis (J.COG0094)
COORDINATES: similar to AA sequence:RefSeq:WP_011255718.1
COORDINATES: similar to AA sequence:RefSeq:WP_011452587.1
COORDINATES: similar to AA sequence:RefSeq:WP_011567679.1
Translation, ribosomal structure and biogenesis (J.COG0186)
COORDINATES: similar to AA sequence:RefSeq:WP_011255720.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155281.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155282.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255721.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155284.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155285.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155286.1
Translation, ribosomal structure and biogenesis (J.COG0089)
COORDINATES: similar to AA sequence:RefSeq:WP_011155287.1
COORDINATES: similar to AA sequence:RefSeq:WP_011452577.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255726.1
COORDINATES: similar to AA sequence:RefSeq:WP_011304725.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155291.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_011155292.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006011250.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255730.1
GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155295.1
COORDINATES: similar to AA sequence:RefSeq:WP_011304731.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255732.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255733.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155299.1
GO:0004325 - ferrochelatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255735.1
GO:0051301 - cell division [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155301.1
COORDINATES: similar to AA sequence:RefSeq:WP_011304737.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255737.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255738.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155305.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155306.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255741.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155308.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155309.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255744.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155311.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255746.1
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011255747.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255748.1
GO:0004333 - fumarate hydratase activity [Evidence IEA]
Coenzyme transport and metabolism (H.COG0452)
COORDINATES: similar to AA sequence:RefSeq:WP_011255749.1
Nucleotide transport and metabolism (F.COG0044)
COORDINATES: similar to AA sequence:RefSeq:WP_011155315.1
GO:0004151 - dihydroorotase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155316.1
GO:0033819 - lipoyl(octanoyl) transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155317.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011255751.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255752.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155320.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255754.1
COORDINATES: similar to AA sequence:RefSeq:WP_010265648.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011155323.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0140662 - ATP-dependent protein folding chaperone [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255755.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155325.1
phosphoribosylformylglycinamidine synthase subunit PurQ
COORDINATES: similar to AA sequence:RefSeq:WP_011255757.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_011155327.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011256143.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255760.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255761.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255762.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: similar to AA sequence:RefSeq:WP_011255763.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155332.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: similar to AA sequence:RefSeq:WP_011255765.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155334.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155335.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155336.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155337.1
histidine phosphotransferase family protein
Nucleotide transport and metabolism (F.COG0150)
COORDINATES: similar to AA sequence:RefSeq:WP_011155338.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_011155339.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155340.1
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_011155341.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011255771.1
FtsQ-type POTRA domain-containing protein
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: similar to AA sequence:RefSeq:WP_011114165.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155343.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004363 - glutathione synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155344.1
COORDINATES: similar to AA sequence:RefSeq:WP_011304781.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155346.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155347.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155348.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255779.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155350.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255781.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155352.1
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: similar to AA sequence:RefSeq:WP_011155353.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155354.1
COORDINATES: similar to AA sequence:RefSeq:WP_011304792.1
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_011155356.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_011155357.1
COORDINATES: similar to AA sequence:RefSeq:WP_006010821.1
GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011452531.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0008177 - succinate dehydrogenase (ubiquinone) activity [Evidence IEA]
succinate dehydrogenase iron-sulfur subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011255789.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
succinate dehydrogenase flavoprotein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011255790.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011255791.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155363.1
GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0070905 - serine binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155364.1
COORDINATES: similar to AA sequence:RefSeq:WP_011304803.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155366.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255792.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155368.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255794.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255795.1
DsbE family thiol:disulfide interchange protein
COORDINATES: similar to AA sequence:RefSeq:WP_011155371.1
BolA/IbaG family iron-sulfur metabolism protein
COORDINATES: similar to AA sequence:RefSeq:WP_011255796.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255797.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006010668.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0033890 - ribonuclease D activity [Evidence IEA]
GO:0042780 - tRNA 3'-end processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155375.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155376.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155377.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006280485.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255802.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011155380.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155381.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155382.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155383.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
GO:0006784 - heme A biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255806.1
GO:0015439 - ABC-type heme transporter activity [Evidence IEA]
GO:0015886 - heme transport [Evidence IEA]
heme ABC exporter ATP-binding protein CcmA
COORDINATES: similar to AA sequence:RefSeq:WP_011155385.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155386.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155387.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255810.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255811.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155390.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255814.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255815.1
COORDINATES: similar to AA sequence:RefSeq:WP_011256157.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255818.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255819.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155396.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155397.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155398.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255824.1
COORDINATES: similar to AA sequence:RefSeq:WP_006010278.1
Catalyzes the phosphorylation of UMP to UDP; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011155400.1
Translation, ribosomal structure and biogenesis (J.COG0233)
COORDINATES: similar to AA sequence:RefSeq:WP_011155401.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155403.1
AsmA-like C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006010281.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255829.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255830.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155407.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155408.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155409.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155410.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155411.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155412.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155415.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155414.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155413.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255841.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155417.1
COORDINATES: similar to AA sequence:RefSeq:WP_006010002.1
GO:0018580 - nitronate monooxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255844.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255845.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255846.1
GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051262 - protein tetramerization [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255847.1
Tim44/TimA family putative adaptor protein
COORDINATES: similar to AA sequence:RefSeq:WP_011255848.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155424.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155425.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006010011.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155427.1
GO:0003951 - NAD+ kinase activity [Evidence IEA]
GO:0019674 - NAD metabolic process [Evidence IEA]; GO:0006741 - NADP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011256164.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: similar to AA sequence:RefSeq:WP_011255850.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155430.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
Intracellular trafficking, secretion, and vesicular transport (U.COG3504)
COORDINATES: similar to AA sequence:RefSeq:WP_011155431.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155432.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155433.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: similar to AA sequence:RefSeq:WP_011155434.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155435.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255853.1
COORDINATES: similar to AA sequence:RefSeq:WP_011256166.1
COORDINATES: similar to AA sequence:RefSeq:WP_011256167.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_011304902.1
SurA N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF023302.2
COORDINATES: similar to AA sequence:RefSeq:WP_011255857.1
COORDINATES: protein motif:HMM:NF022400.2
COORDINATES: similar to AA sequence:RefSeq:WP_011155441.1
GO:1990107 - thiazole synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006011815.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255861.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155444.1
COORDINATES: similar to AA sequence:RefSeq:WP_007302145.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155446.1
COORDINATES: similar to AA sequence:RefSeq:WP_011304912.1
GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155448.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
ATP-dependent protease ATPase subunit HslU
COORDINATES: similar to AA sequence:RefSeq:WP_011255867.1
GO:0052624 - 2-phytyl-1,4-naphthoquinone methyltransferase activity [Evidence IEA]
GO:0042372 - phylloquinone biosynthetic process [Evidence IEA]
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
COORDINATES: similar to AA sequence:RefSeq:WP_011255868.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255869.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155452.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155453.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155454.1
GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255871.1
outer membrane protein assembly factor BamD
COORDINATES: similar to AA sequence:RefSeq:WP_011304921.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155457.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155458.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155459.1
GO:0009279 - cell outer membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255877.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155461.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155462.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_011255878.1
GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155464.1
COORDINATES: similar to AA sequence:RefSeq:WP_006010327.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012880466.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255880.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255881.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255882.1
GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255883.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_011255884.1
GO:0003994 - aconitate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011452961.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255885.1
5-(carboxyamino)imidazole ribonucleotide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011255886.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155475.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155476.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155477.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155478.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155480.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255895.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155482.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0045861 - negative regulation of proteolysis [Evidence IEA]
Posttranslational modification, protein turnover, chaperones (O.COG0330)
COORDINATES: similar to AA sequence:RefSeq:WP_011255897.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255898.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255899.1
GO:0044874 - lipoprotein localization to outer membrane [Evidence IEA]; GO:0042953 - lipoprotein transport [Evidence IEA]
outer membrane lipoprotein carrier protein LolA
COORDINATES: similar to AA sequence:RefSeq:WP_011255900.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155487.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255902.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255903.1
COORDINATES: similar to AA sequence:RefSeq:WP_011256182.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255906.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155492.1
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_010265991.1
Translation, ribosomal structure and biogenesis (J.COG2890)
COORDINATES: similar to AA sequence:RefSeq:WP_011155494.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155495.1
COORDINATES: similar to AA sequence:RefSeq:WP_006013469.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255912.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255913.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255914.1
GO:0045252 - oxoglutarate dehydrogenase complex [Evidence IEA]
GO:0004149 - dihydrolipoyllysine-residue succinyltransferase activity [Evidence IEA]
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011155500.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155501.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011155502.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155503.1
succinate dehydrogenase assembly factor 2
COORDINATES: similar to AA sequence:RefSeq:WP_011155504.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255920.1
outer membrane protein assembly factor BamA
COORDINATES: similar to AA sequence:RefSeq:WP_011155506.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155507.1
COORDINATES: similar to AA sequence:RefSeq:WP_011452983.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_011155509.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011155510.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_011255925.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155512.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155513.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255930.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155515.1
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006014985.1
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155517.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155518.1
COORDINATES: similar to AA sequence:RefSeq:WP_006010295.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
Inorganic ion transport and metabolism (P.COG0168)
COORDINATES: similar to AA sequence:RefSeq:WP_011155520.1
GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155521.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155522.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255935.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_011255936.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155525.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155526.1
Coenzyme transport and metabolism (H.COG0476)
COORDINATES: similar to AA sequence:RefSeq:WP_011255938.1
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011304993.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155529.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155530.1
GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155531.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_011155532.1
COORDINATES: protein motif:HMM:NF013298.2
COORDINATES: similar to AA sequence:RefSeq:WP_011155533.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:WP_011155534.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155535.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255946.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011155537.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255948.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255950.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155541.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255952.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255953.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255954.1
COORDINATES: similar to AA sequence:RefSeq:WP_011256192.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155546.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255957.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255958.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255959.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155550.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155551.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155552.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155553.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155554.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255966.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155556.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255967.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255968.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011255969.1
COORDINATES: similar to AA sequence:RefSeq:WP_011255970.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010266435.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155562.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_011155563.1
GO:0006364 - rRNA processing [Evidence IEA]
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011256196.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_011155565.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155566.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155567.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011155568.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155569.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: similar to AA sequence:RefSeq:WP_011255978.1
COORDINATES: similar to AA sequence:RefSeq:WP_011155571.1