Leucoraja erinacea ecotype New England chromosome 48, Leri_hhj_1, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Leucoraja.
REFSEQ INFORMATION: The reference sequence is identical to\nCM054054.1.\nAssembly name: Leri_hhj_1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Okinawa Institute of Science\nand Technology on 2023/02/22. The original whole-genome shotgun\nproject has the accession JAMYXN000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Okinawa Institute of Science and\n Technology\nAssembly Date :: 21-FEB-2019\nAssembly Method :: dbg2olc v. 20160205\nAssembly Name :: Leri_hhj_1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 150.0x\nSequencing Technology :: Illumina; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_028641065.1-RS_2023_04\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 04/21/2023\n##Genome-Annotation-Data-END##
protein O-GlcNAcase; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon.
coiled-coil domain containing 166; Derived by automated computational analysis using gene prediction method: Gnomon.
COORDINATES: polyA evidence [ECO:0006239]
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F; Derived by automated computational analysis using gene prediction method: Gnomon.
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
small nucleolar RNA U85; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF01296
Derived by automated computational analysis using gene prediction method: cmsearch.
uncharacterized LOC129715034; Derived by automated computational analysis using gene prediction method: Gnomon.
meiosis 1 associated protein; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
docking protein 1b; Derived by automated computational analysis using gene prediction method: Gnomon.
N-acetylglucosamine kinase; Derived by automated computational analysis using gene prediction method: Gnomon.
N-acetylglucosamine kinase, transcript variant X1
N-acetylglucosamine kinase, transcript variant X2
N-acetyl-D-glucosamine kinase isoform X1
N-acetyl-D-glucosamine kinase isoform X2
uncharacterized LOC129715036; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC129715036, transcript variant X4
uncharacterized LOC129715036, transcript variant X1
uncharacterized LOC129715036, transcript variant X5
uncharacterized LOC129715036, transcript variant X3
uncharacterized LOC129715036, transcript variant X2
uncharacterized protein LOC129715036 isoform X1
uncharacterized protein LOC129715036 isoform X3
uncharacterized protein LOC129715036 isoform X2
uncharacterized protein LOC129715036 isoform X4
polyadenylate-binding protein-interacting protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
polyadenylate-binding protein-interacting protein 2-like, transcript variant X3
polyadenylate-binding protein-interacting protein 2-like, transcript variant X1
polyadenylate-binding protein-interacting protein 2-like, transcript variant X2
polyadenylate-binding protein-interacting protein 2-like isoform X1
polyadenylate-binding protein-interacting protein 2-like isoform X2
exocyst complex component 6B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
cytochrome P450 26B1; Derived by automated computational analysis using gene prediction method: Gnomon.
cytochrome P450 26B1, transcript variant X1
cytochrome P450 26B1, transcript variant X2