Leucoraja erinacea ecotype New England chromosome 47, Leri_hhj_1, whole genome shotgun sequence.
type: Entry
definition: Leucoraja erinacea ecotype New England chromosome 47, Leri_hhj_1, whole genome shotgun sequence.
sequence version: NC_073423.1
sequence date: 2023-04-27
sequence: sequence
division: CON
label: NC_073423.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA955276
dblink: SAMN23457310
keyword: WGS
keyword: RefSeq
source: Leucoraja erinacea (little skate)
organism: Leucoraja erinacea
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Leucoraja.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM054053.1.\nAssembly name: Leri_hhj_1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Okinawa Institute of Science\nand Technology on 2023/02/22. The original whole-genome shotgun\nproject has the accession JAMYXN000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Okinawa Institute of Science and\n Technology\nAssembly Date :: 21-FEB-2019\nAssembly Method :: dbg2olc v. 20160205\nAssembly Name :: Leri_hhj_1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 150.0x\nSequencing Technology :: Illumina; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_028641065.1-RS_2023_04\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 04/21/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 1403686
topology: linear
so has quality: SO_0000987
location: 1..1403686
location: region:1-1403686:1
RO_0002162: 7782

NC_073423
type: RefSeq
SIO_000068: refseq

PRJNA955276
type: BioProject
SIO_000068: bioproject

SAMN23457310
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1403686:1
position: 1403686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1403686:1:source
so part of: sequence
organism: Leucoraja erinacea
mol type: genomic DNA
specimen voucher: LE0618
chromosome: 47
tissue type: liver
dev stage: adult
ecotype: New England

7782
type: Taxonomy
SIO_000068: taxonomy

LOC129715024
type: Gene
subclass of: SO_0000704
RO_0002162: 7782
gene: LOC129715024
note: NALCN channel auxiliary factor 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(41464..44308)
location: region:41464-44308:-1
so has part: feature:41464-44308:-1:exon
subclass of: SO_0000010

129715024
type: Gene
SIO_000068: ncbigene

position:41464:-1
position: 41464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44308:-1
position: 44308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41464-44308:-1:exon

LOC129715024
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: LOC129715024
product: NALCN channel auxiliary factor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_055664846.1
SIO_010081: LOC129715024
subclass of: SO_0000673
so part of: LOC129715024
location: complement(41464..44308)
location: region:41464-44308:-1
so has part: feature:41464-44308:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41464-44308:-1:exon

LOC129715024
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: LOC129715024
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NALCN channel auxiliary factor 1-like
translation: MTRGAWMCRRQDNGLQIWYVPRQNDKPCTDSERAQKWRLSLASLLFFTVLLSDYLWLCAEANLTRSRDQERSTSAEPTGGNRSLSPLFLSADQPRSTASSDKRAIFLGNTTGRPICQLEPCRPYYVCEQCVSIEDAETVCGSAGEEASNGSPPLSFNNFHLSFCESYTLSELFAGMSRPEGSNCDLSLVLDGDATVCVQCVEIYQRLDQHAQEKYEEFQSLFQKYLQWADYSVKSCIDDCKVRAWSFYSPCLVAWLRWRVWSWPSLSVGVATVFGGRCAPGFLN
SIO_010081: LOC129715024
subclass of: SO_0000673
so part of: LOC129715024
location: complement(42351..43205)
location: region:42351-43205:-1
so has part: feature:42351-43205:-1:exon

XP_055520821.1
type: Protein
SIO_000068: ncbiprotein

position:42351:-1
position: 42351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43205:-1
position: 43205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42351-43205:-1:exon

LOC129715025
type: Gene
subclass of: SO_0000704
RO_0002162: 7782
gene: LOC129715025
note: microcephalin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(114101..197900)
location: region:114101-197900:-1
so has part: feature:114101-197900:-1:exon
subclass of: SO_0000010

129715025
type: Gene
SIO_000068: ncbigene

position:114101:-1
position: 114101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197900:-1
position: 197900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114101-197900:-1:exon

LOC129715025
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: LOC129715025
product: microcephalin-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055664847.1
SIO_010081: LOC129715025
subclass of: SO_0000673
so part of: LOC129715025
location: complement(join(114101..114303,126245..126482,133187..133264,134073..134235,136449..136486,140202..140302,149624..150940,157881..157979,164786..164932,167387..167498,169225..169309,174883..175001,186260..186351,195382..195458,197746..197795,197837..197900))
location: region:114101-197900:-1
so has part: feature:197837-197900:-1:exon
so has part: feature:197746-197795:-1:exon
so has part: feature:195382-195458:-1:exon
so has part: feature:186260-186351:-1:exon
so has part: feature:174883-175001:-1:exon
so has part: feature:169225-169309:-1:exon
so has part: feature:167387-167498:-1:exon
so has part: feature:164786-164932:-1:exon
so has part: feature:157881-157979:-1:exon
so has part: feature:149624-150940:-1:exon
so has part: feature:140202-140302:-1:exon
so has part: feature:136449-136486:-1:exon
so has part: feature:134073-134235:-1:exon
so has part: feature:133187-133264:-1:exon
so has part: feature:126245-126482:-1:exon
so has part: feature:114101-114303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197837-197900:-1:exon

position:197837:-1
position: 197837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197746-197795:-1:exon

position:197746:-1
position: 197746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197795:-1
position: 197795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:195382-195458:-1:exon

position:195382:-1
position: 195382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195458:-1
position: 195458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:186260-186351:-1:exon

position:186260:-1
position: 186260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186351:-1
position: 186351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:174883-175001:-1:exon

position:174883:-1
position: 174883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175001:-1
position: 175001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:169225-169309:-1:exon

position:169225:-1
position: 169225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169309:-1
position: 169309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:167387-167498:-1:exon

position:167387:-1
position: 167387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167498:-1
position: 167498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:164786-164932:-1:exon

position:164786:-1
position: 164786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164932:-1
position: 164932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:157881-157979:-1:exon

position:157881:-1
position: 157881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157979:-1
position: 157979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:149624-150940:-1:exon

position:149624:-1
position: 149624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150940:-1
position: 150940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:140202-140302:-1:exon

position:140202:-1
position: 140202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140302:-1
position: 140302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:136449-136486:-1:exon

position:136449:-1
position: 136449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136486:-1
position: 136486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:134073-134235:-1:exon

position:134073:-1
position: 134073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134235:-1
position: 134235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:133187-133264:-1:exon

position:133187:-1
position: 133187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133264:-1
position: 133264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:126245-126482:-1:exon

position:126245:-1
position: 126245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126482:-1
position: 126482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:114101-114303:-1:exon

position:114303:-1
position: 114303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC129715025
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: LOC129715025
product: microcephalin-like, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055664849.1
SIO_010081: LOC129715025
subclass of: SO_0000673
so part of: LOC129715025
location: complement(join(114101..114303,126245..126482,133187..133264,134073..134235,136449..136486,140202..140298,157877..157979,164786..164932,167387..167498,169225..169309,174883..175001,186260..186351,195382..195458,197746..197805))
location: region:114101-197805:-1
so has part: feature:197746-197805:-1:exon
so has part: feature:195382-195458:-1:exon
so has part: feature:186260-186351:-1:exon
so has part: feature:174883-175001:-1:exon
so has part: feature:169225-169309:-1:exon
so has part: feature:167387-167498:-1:exon
so has part: feature:164786-164932:-1:exon
so has part: feature:157877-157979:-1:exon
so has part: feature:140202-140298:-1:exon
so has part: feature:136449-136486:-1:exon
so has part: feature:134073-134235:-1:exon
so has part: feature:133187-133264:-1:exon
so has part: feature:126245-126482:-1:exon
so has part: feature:114101-114303:-1:exon

position:197805:-1
position: 197805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197746-197805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195382-195458:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186260-186351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:174883-175001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169225-169309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:167387-167498:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:164786-164932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:157877-157979:-1:exon

position:157877:-1
position: 157877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:140202-140298:-1:exon

position:140298:-1
position: 140298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:136449-136486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134073-134235:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:133187-133264:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:126245-126482:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:114101-114303:-1:exon

LOC129715025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: LOC129715025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microcephalin-like isoform X1
translation: MTSDCSKTSILQDVVAFVNVWSSNRTENYSKSFEEDLVDMGARVLKYFNKHVTHVVFKDGHESVWKKAQKTGVKLVSVLWVERCLTTHTHVDESLFPAINESKHSPKNKRTHRCMKPKDFIEKTPTNNKRLKKKLDQMIRELDLKRTTGADLNLLSLEEDAVGLYNSNVELVPFNHFCGMEKRLKEMKEKRENPSPTASQMSQLTSASALAPCQPDLGESPSSFAKALFADEYEIDSGGASSGGASINKTLGKYGHESKDPLSAEAHEGQTGHHSSQEFFTRGMHLVKSSQVENGKTLPRRVRKSISKMKSPFPTRQSVKAALHCVEESVSSCSKEAIQSYSEGSVEALNSAAVDLRLCNAQSNKIVQLPLPVKSAASEKDHNLTQTKFSSNECDKNDASPLISNLSRRTKNQLSLKKNKKLWQDDFMGFKSPRNNPLEACDCSDKNDACPIKEDLLAYEDFFSPVNLNCKNNPRCTLGMLPPKSPSLPDIFGSGKQKRKLQEINPQNSADRTKKARSATNVSVEEQSDARFYGQHVNAAALTGENVALQPDATKALKKRKSHVKNPFQYFLDESGALTNDVPERKEPGQHHEMKRLDLLLKHNSDLKPPTLRHETQAFSVISLRPCDETKANEKDVQCLQEDNMAKDILKLQSIDSDLDGDPHSGLNQSSPSRLRMNCLHEEKNKLIEGANTTKNCIRKNVKPTRTLVMTSMPSENQSIIIQIVKRFGGFQFSDNVCETTTHVVAGHTRRTLNVLFGIARGCWILSFNWILWSLEQGCWAPEESFELSTAFPAATICRFERQSTKEPYLQDLFVNQPLIFISPQSKPPALALEKLVLLCGGQVCKTLRRTGICIGQYKGRRPAGNQHLSENWILDSITKHEVCSPDNYTLE
SIO_010081: LOC129715025
subclass of: SO_0000673
so part of: LOC129715025
location: complement(join(114251..114303,126245..126482,133187..133264,134073..134235,136449..136486,140202..140302,149624..150940,157881..157979,164786..164932,167387..167498,169225..169309,174883..175001,186260..186351,195382..195418))
location: region:114251-195418:-1
so has part: feature:195382-195418:-1:exon
so has part: feature:186260-186351:-1:exon
so has part: feature:174883-175001:-1:exon
so has part: feature:169225-169309:-1:exon
so has part: feature:167387-167498:-1:exon
so has part: feature:164786-164932:-1:exon
so has part: feature:157881-157979:-1:exon
so has part: feature:149624-150940:-1:exon
so has part: feature:140202-140302:-1:exon
so has part: feature:136449-136486:-1:exon
so has part: feature:134073-134235:-1:exon
so has part: feature:133187-133264:-1:exon
so has part: feature:126245-126482:-1:exon
so has part: feature:114251-114303:-1:exon

XP_055520822.1
type: Protein
SIO_000068: ncbiprotein

position:114251:-1
position: 114251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195418:-1
position: 195418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195382-195418:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186260-186351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174883-175001:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:169225-169309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167387-167498:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:164786-164932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:157881-157979:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:149624-150940:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:140202-140302:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:136449-136486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134073-134235:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:133187-133264:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:126245-126482:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:114251-114303:-1:exon

LOC129715025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: LOC129715025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microcephalin-like isoform X3
translation: MTSDCSKTSILQDVVAFVNVWSSNRTENYSKSFEEDLVDMGARVLKYFNKHVTHVVFKDGHESVWKKAQKTGVKLVSVLWVERCLTTHTHVDESLFPAINESKHSPKNKRTHRCMKPKDFIEKTPTNNKRLKKKLDQMIRELDLKRTTGADLNLLSLEEDAVGLYNSNVELVPFNHFCGMEKRLKEMKEKRENPSPTASQMSQLTSASALAPCQPDLGESPSSFAKALFAGNPSRLRMNCLHEEKNKLIEGANTTKNCIRKNVKPTRTLVMTSMPSENQSIIIQIVKRFGGFQFSDNVCETTTHVVAGHTRRTLNVLFGIARGCWILSFNWILWSLEQGCWAPEESFELSTAFPAATICRFERQSTKEPYLQDLFVNQPLIFISPQSKPPALALEKLVLLCGGQVCKTLRRTGICIGQYKGRRPAGNQHLSENWILDSITKHEVCSPDNYTLE
SIO_010081: LOC129715025
subclass of: SO_0000673
so part of: LOC129715025
location: complement(join(114251..114303,126245..126482,133187..133264,134073..134235,136449..136486,140202..140298,157877..157979,164786..164932,167387..167498,169225..169309,174883..175001,186260..186351,195382..195418))
location: region:114251-195418:-1
so has part: feature:195382-195418:-1:exon
so has part: feature:186260-186351:-1:exon
so has part: feature:174883-175001:-1:exon
so has part: feature:169225-169309:-1:exon
so has part: feature:167387-167498:-1:exon
so has part: feature:164786-164932:-1:exon
so has part: feature:157877-157979:-1:exon
so has part: feature:140202-140298:-1:exon
so has part: feature:136449-136486:-1:exon
so has part: feature:134073-134235:-1:exon
so has part: feature:133187-133264:-1:exon
so has part: feature:126245-126482:-1:exon
so has part: feature:114251-114303:-1:exon

XP_055520824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195382-195418:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186260-186351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174883-175001:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:169225-169309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167387-167498:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:164786-164932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:157877-157979:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:140202-140298:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:136449-136486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:134073-134235:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:133187-133264:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:126245-126482:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:114251-114303:-1:exon

LOC129715025
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: LOC129715025
product: microcephalin-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055664848.1
SIO_010081: LOC129715025
subclass of: SO_0000673
so part of: LOC129715025
location: complement(join(128616..131075,133187..133264,134073..134235,136449..136486,140202..140302,149624..150940,157881..157979,164786..164932,167387..167498,169225..169309,174883..175001,186260..186351,195382..195458,197746..197805))
location: region:128616-197805:-1
so has part: feature:197746-197805:-1:exon
so has part: feature:195382-195458:-1:exon
so has part: feature:186260-186351:-1:exon
so has part: feature:174883-175001:-1:exon
so has part: feature:169225-169309:-1:exon
so has part: feature:167387-167498:-1:exon
so has part: feature:164786-164932:-1:exon
so has part: feature:157881-157979:-1:exon
so has part: feature:149624-150940:-1:exon
so has part: feature:140202-140302:-1:exon
so has part: feature:136449-136486:-1:exon
so has part: feature:134073-134235:-1:exon
so has part: feature:133187-133264:-1:exon
so has part: feature:128616-131075:-1:exon

position:128616:-1
position: 128616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197746-197805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195382-195458:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186260-186351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:174883-175001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169225-169309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:167387-167498:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:164786-164932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:157881-157979:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:149624-150940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:140202-140302:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:136449-136486:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:134073-134235:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:133187-133264:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:128616-131075:-1:exon

position:131075:-1
position: 131075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC129715025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: LOC129715025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microcephalin-like isoform X2
translation: MTSDCSKTSILQDVVAFVNVWSSNRTENYSKSFEEDLVDMGARVLKYFNKHVTHVVFKDGHESVWKKAQKTGVKLVSVLWVERCLTTHTHVDESLFPAINESKHSPKNKRTHRCMKPKDFIEKTPTNNKRLKKKLDQMIRELDLKRTTGADLNLLSLEEDAVGLYNSNVELVPFNHFCGMEKRLKEMKEKRENPSPTASQMSQLTSASALAPCQPDLGESPSSFAKALFADEYEIDSGGASSGGASINKTLGKYGHESKDPLSAEAHEGQTGHHSSQEFFTRGMHLVKSSQVENGKTLPRRVRKSISKMKSPFPTRQSVKAALHCVEESVSSCSKEAIQSYSEGSVEALNSAAVDLRLCNAQSNKIVQLPLPVKSAASEKDHNLTQTKFSSNECDKNDASPLISNLSRRTKNQLSLKKNKKLWQDDFMGFKSPRNNPLEACDCSDKNDACPIKEDLLAYEDFFSPVNLNCKNNPRCTLGMLPPKSPSLPDIFGSGKQKRKLQEINPQNSADRTKKARSATNVSVEEQSDARFYGQHVNAAALTGENVALQPDATKALKKRKSHVKNPFQYFLDESGALTNDVPERKEPGQHHEMKRLDLLLKHNSDLKPPTLRHETQAFSVISLRPCDETKANEKDVQCLQEDNMAKDILKLQSIDSDLDGDPHSGLNQSSPSRLRMNCLHEEKNKLIEGANTTKNCIRKNVKPTRTLVMTSMPSENQSIIIQIVKRFGGFQFSDNVCETTTHVVAGHTRRTLNVLFGIARGCWILSFNWILWSLEQGCWAPEESFELSTAFPAATKSRTCLTLVILTSGKKYRSVKTHTSRFRDSFFPAVIRQLNLPMTN
SIO_010081: LOC129715025
subclass of: SO_0000673
so part of: LOC129715025
location: complement(join(130938..131075,133187..133264,134073..134235,136449..136486,140202..140302,149624..150940,157881..157979,164786..164932,167387..167498,169225..169309,174883..175001,186260..186351,195382..195418))
location: region:130938-195418:-1
so has part: feature:195382-195418:-1:exon
so has part: feature:186260-186351:-1:exon
so has part: feature:174883-175001:-1:exon
so has part: feature:169225-169309:-1:exon
so has part: feature:167387-167498:-1:exon
so has part: feature:164786-164932:-1:exon
so has part: feature:157881-157979:-1:exon
so has part: feature:149624-150940:-1:exon
so has part: feature:140202-140302:-1:exon
so has part: feature:136449-136486:-1:exon
so has part: feature:134073-134235:-1:exon
so has part: feature:133187-133264:-1:exon
so has part: feature:130938-131075:-1:exon

XP_055520823.1
type: Protein
SIO_000068: ncbiprotein

position:130938:-1
position: 130938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195382-195418:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186260-186351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174883-175001:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:169225-169309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167387-167498:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:164786-164932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:157881-157979:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:149624-150940:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:140202-140302:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:136449-136486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134073-134235:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:133187-133264:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:130938-131075:-1:exon

LOC129715025
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7782
gene: LOC129715025
product: microcephalin-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST
transcript id: XR_008726434.1
SIO_010081: LOC129715025
so part of: LOC129715025
location: complement(join(133187..133264,134073..134186,136449..136486,140202..140302,149624..150940,157881..157979,164786..164932,167387..167498,169225..169309,174883..175001,186260..186351,195382..195458,197746..197805))
location: region:133187-197805:-1
so has part: feature:197746-197805:-1:exon
so has part: feature:195382-195458:-1:exon
so has part: feature:186260-186351:-1:exon
so has part: feature:174883-175001:-1:exon
so has part: feature:169225-169309:-1:exon
so has part: feature:167387-167498:-1:exon
so has part: feature:164786-164932:-1:exon
so has part: feature:157881-157979:-1:exon
so has part: feature:149624-150940:-1:exon
so has part: feature:140202-140302:-1:exon
so has part: feature:136449-136486:-1:exon
so has part: feature:134073-134186:-1:exon
so has part: feature:133187-133264:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197746-197805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195382-195458:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186260-186351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:174883-175001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169225-169309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:167387-167498:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:164786-164932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:157881-157979:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:149624-150940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:140202-140302:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:136449-136486:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:134073-134186:-1:exon

position:134186:-1
position: 134186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:133187-133264:-1:exon

LOC129715022
type: Gene
subclass of: SO_0000704
RO_0002162: 7782
gene: LOC129715022
note: uncharacterized LOC129715022; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(880826..883293)
location: region:880826-883293:-1
so has part: feature:880826-883293:-1:exon

129715022
type: Gene
SIO_000068: ncbigene

position:880826:-1
position: 880826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883293:-1
position: 883293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880826-883293:-1:exon

LOC129715022
type: Exon
subclass of: SO_0000147
RO_0002162: 7782
gene: LOC129715022
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC129715022
subclass of: SO_0000673
so part of: LOC129715022
location: complement(880826..883293)
location: region:880826-883293:-1
so has part: feature:880826-883293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:880826-883293:-1:exon

LOC129715023
type: Gene
subclass of: SO_0000704
RO_0002162: 7782
gene: LOC129715023
note: NALCN channel auxiliary factor 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1041806..1050285
location: region:1041806-1050285:1
so has part: feature:1041806-1050285:1:exon
subclass of: SO_0000010

129715023
type: Gene
SIO_000068: ncbigene

position:1041806:1
position: 1041806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050285:1
position: 1050285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1041806-1050285:1:exon

LOC129715023
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: LOC129715023
product: NALCN channel auxiliary factor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_055664844.1
SIO_010081: LOC129715023
subclass of: SO_0000673
so part of: LOC129715023
location: join(1041806..1041967,1042780..1042951,1044159..1050285)
location: region:1041806-1050285:1
so has part: feature:1041806-1041967:1:exon
so has part: feature:1042780-1042951:1:exon
so has part: feature:1044159-1050285:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1041806-1041967:1:exon

position:1041967:1
position: 1041967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1042780-1042951:1:exon

position:1042780:1
position: 1042780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042951:1
position: 1042951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1044159-1050285:1:exon

position:1044159:1
position: 1044159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC129715023
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: LOC129715023
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NALCN channel auxiliary factor 1-like
translation: MENTNLFNTLRNHLQAKVDTEDDIRHLFPCDSTASDRKKEALSEEQEQEGFRYWTVYKAWLCSQYFEATQFHCSSRIPCKQYCSEVQTRCPFVLPDNKDLVYGGLPSFLCADVPNNHPTNAEPECCDVRWEIHNAASNKQSKGGRGATKPVLCHRSSLTTSAASRLCNTRLKLCVLVLILLHTVVTVSASQTSAGLSSGGLPAWDDNATNDE
SIO_010081: LOC129715023
subclass of: SO_0000673
so part of: LOC129715023
location: join(1041806..1041967,1042780..1042951,1044159..1044463)
location: region:1041806-1044463:1
so has part: feature:1041806-1041967:1:exon
so has part: feature:1042780-1042951:1:exon
so has part: feature:1044159-1044463:1:exon

XP_055520819.1
type: Protein
SIO_000068: ncbiprotein

position:1044463:1
position: 1044463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1041806-1041967:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1042780-1042951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044159-1044463:1:exon

LOC129715020
type: Gene
subclass of: SO_0000704
RO_0002162: 7782
gene: LOC129715020
note: ETS-related transcription factor Elf-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1069699..1209261
location: region:1069699-1209261:1
so has part: feature:1069699-1209261:1:exon
subclass of: SO_0000010

129715020
type: Gene
SIO_000068: ncbigene

position:1069699:1
position: 1069699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1209261:1
position: 1209261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1069699-1209261:1:exon

LOC129715020
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: LOC129715020
product: ETS-related transcription factor Elf-1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055664835.1
SIO_010081: LOC129715020
subclass of: SO_0000673
so part of: LOC129715020
location: join(1069699..1069824,1106507..1106946,1133080..1133251,1168113..1168220,1170510..1170686,1183153..1183233,1187329..1187521,1204740..1205276,1207658..1209261)
location: region:1069699-1209261:1
so has part: feature:1069699-1069824:1:exon
so has part: feature:1106507-1106946:1:exon
so has part: feature:1133080-1133251:1:exon
so has part: feature:1168113-1168220:1:exon
so has part: feature:1170510-1170686:1:exon
so has part: feature:1183153-1183233:1:exon
so has part: feature:1187329-1187521:1:exon
so has part: feature:1204740-1205276:1:exon
so has part: feature:1207658-1209261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1069699-1069824:1:exon

position:1069824:1
position: 1069824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1106507-1106946:1:exon

position:1106507:1
position: 1106507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106946:1
position: 1106946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1133080-1133251:1:exon

position:1133080:1
position: 1133080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1133251:1
position: 1133251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1168113-1168220:1:exon

position:1168113:1
position: 1168113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1168220:1
position: 1168220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1170510-1170686:1:exon

position:1170510:1
position: 1170510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1170686:1
position: 1170686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1183153-1183233:1:exon

position:1183153:1
position: 1183153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183233:1
position: 1183233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1187329-1187521:1:exon

position:1187329:1
position: 1187329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187521:1
position: 1187521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1204740-1205276:1:exon

position:1204740:1
position: 1204740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1205276:1
position: 1205276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1207658-1209261:1:exon

position:1207658:1
position: 1207658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC129715020
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: LOC129715020
product: ETS-related transcription factor Elf-1-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055664836.1
SIO_010081: LOC129715020
subclass of: SO_0000673
so part of: LOC129715020
location: join(1069914..1072058,1106507..1106946,1133080..1133251,1168113..1168220,1170510..1170686,1183153..1183233,1187329..1187521,1204740..1205276,1207658..1209261)
location: region:1069914-1209261:1
so has part: feature:1069914-1072058:1:exon
so has part: feature:1106507-1106946:1:exon
so has part: feature:1133080-1133251:1:exon
so has part: feature:1168113-1168220:1:exon
so has part: feature:1170510-1170686:1:exon
so has part: feature:1183153-1183233:1:exon
so has part: feature:1187329-1187521:1:exon
so has part: feature:1204740-1205276:1:exon
so has part: feature:1207658-1209261:1:exon

position:1069914:1
position: 1069914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1069914-1072058:1:exon

position:1072058:1
position: 1072058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1106507-1106946:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133080-1133251:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1168113-1168220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1170510-1170686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1183153-1183233:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187329-1187521:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1204740-1205276:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1207658-1209261:1:exon

LOC129715020
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: LOC129715020
product: ETS-related transcription factor Elf-1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055664834.1
SIO_010081: LOC129715020
subclass of: SO_0000673
so part of: LOC129715020
location: join(1083789..1083941,1106507..1106946,1133080..1133251,1168113..1168220,1170510..1170686,1183153..1183233,1187329..1187521,1204740..1205276,1207658..1209261)
location: region:1083789-1209261:1
so has part: feature:1083789-1083941:1:exon
so has part: feature:1106507-1106946:1:exon
so has part: feature:1133080-1133251:1:exon
so has part: feature:1168113-1168220:1:exon
so has part: feature:1170510-1170686:1:exon
so has part: feature:1183153-1183233:1:exon
so has part: feature:1187329-1187521:1:exon
so has part: feature:1204740-1205276:1:exon
so has part: feature:1207658-1209261:1:exon

position:1083789:1
position: 1083789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1083789-1083941:1:exon

position:1083941:1
position: 1083941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1106507-1106946:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133080-1133251:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1168113-1168220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1170510-1170686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1183153-1183233:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187329-1187521:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1204740-1205276:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1207658-1209261:1:exon

LOC129715020
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: LOC129715020
product: ETS-related transcription factor Elf-1-like, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055664839.1
SIO_010081: LOC129715020
subclass of: SO_0000673
so part of: LOC129715020
location: join(1083789..1083941,1106507..1106926,1133080..1133251,1168113..1168220,1170510..1170686,1183153..1183233,1187329..1187521,1204740..1205276,1207658..1209261)
location: region:1083789-1209261:1
so has part: feature:1083789-1083941:1:exon
so has part: feature:1106507-1106926:1:exon
so has part: feature:1133080-1133251:1:exon
so has part: feature:1168113-1168220:1:exon
so has part: feature:1170510-1170686:1:exon
so has part: feature:1183153-1183233:1:exon
so has part: feature:1187329-1187521:1:exon
so has part: feature:1204740-1205276:1:exon
so has part: feature:1207658-1209261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1083789-1083941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1106507-1106926:1:exon

position:1106926:1
position: 1106926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1133080-1133251:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1168113-1168220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1170510-1170686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1183153-1183233:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187329-1187521:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1204740-1205276:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1207658-1209261:1:exon

LOC129715020
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: LOC129715020
product: ETS-related transcription factor Elf-1-like, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055664838.1
SIO_010081: LOC129715020
subclass of: SO_0000673
so part of: LOC129715020
location: join(1083789..1083941,1106507..1106871,1133080..1133251,1168113..1168220,1170510..1170686,1183153..1183233,1187329..1187521,1204740..1205276,1207658..1209261)
location: region:1083789-1209261:1
so has part: feature:1083789-1083941:1:exon
so has part: feature:1106507-1106871:1:exon
so has part: feature:1133080-1133251:1:exon
so has part: feature:1168113-1168220:1:exon
so has part: feature:1170510-1170686:1:exon
so has part: feature:1183153-1183233:1:exon
so has part: feature:1187329-1187521:1:exon
so has part: feature:1204740-1205276:1:exon
so has part: feature:1207658-1209261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1083789-1083941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1106507-1106871:1:exon

position:1106871:1
position: 1106871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1133080-1133251:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1168113-1168220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1170510-1170686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1183153-1183233:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187329-1187521:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1204740-1205276:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1207658-1209261:1:exon

LOC129715020
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: LOC129715020
product: ETS-related transcription factor Elf-1-like, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055664841.1
SIO_010081: LOC129715020
subclass of: SO_0000673
so part of: LOC129715020
location: join(1083789..1083941,1106507..1106871,1168113..1168220,1170510..1170686,1183153..1183233,1187329..1187521,1204740..1205276,1207658..1209261)
location: region:1083789-1209261:1
so has part: feature:1083789-1083941:1:exon
so has part: feature:1106507-1106871:1:exon
so has part: feature:1168113-1168220:1:exon
so has part: feature:1170510-1170686:1:exon
so has part: feature:1183153-1183233:1:exon
so has part: feature:1187329-1187521:1:exon
so has part: feature:1204740-1205276:1:exon
so has part: feature:1207658-1209261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1083789-1083941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1106507-1106871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1168113-1168220:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1170510-1170686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1183153-1183233:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1187329-1187521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1204740-1205276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1207658-1209261:1:exon

LOC129715020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: LOC129715020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS-related transcription factor Elf-1-like isoform X1
translation: MNVLQFASNDMESAQEVRCSPHIARKDCPQNTSNSKKIFSLAGRSCIFPAVIVEQVPNADLMQDYSGLASDEETNGMINDSLLDIVEEQVIGEEITVPVEASCQNGEESMETIEAAEALLNMDSPGPAVDERRTTHMLMPSVSGVITAPFTHISMRADGVPEVVENAEAIILTEETAQQQMASESMEHTKKRKGRKPRPPRPSSPVANPDLPVKRKNNGKGNTIYLWEFLLALLQDRNTCPRYIKWTQREKGIFKLVDSKAVSRLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKEMPTNLIRFDDDGDDPSNISETRENSSQLTTYKLLATSESPSSVTILPSSMVMSCIQTQKPRVSSHVMMSSGMEALPHPSTAVNSMKATYVGETEQGSVHLLSPEMLRDVEPLHHAQQPNVLNTVQVVRSAPPRHDEKVNDGGIPLSAPVTLSTQSVRTIKSPSQVPVVVSPGAQRIGTVTLQTVPLTTVITSTDLAMSSPKFIFQTVPSSHQGTVLKENVTLQEKSLIAKIVTPTSLAVHGTSFRQVLPASPQLPDNTTHAVSLSSVMGAATPVVTFAATSQQVMNQPQGTVFTSVIKAPETKQTATQTVIKQEDQIEAMGTNPQSDHRIRQSHVIVLTNTAVLPNHVLFGAGEHREVDTQ
SIO_010081: LOC129715020
subclass of: SO_0000673
so part of: LOC129715020
location: join(1106824..1106946,1133080..1133251,1168113..1168220,1170510..1170686,1183153..1183233,1187329..1187521,1204740..1205276,1207658..1208273)
location: region:1106824-1208273:1
so has part: feature:1106824-1106946:1:exon
so has part: feature:1133080-1133251:1:exon
so has part: feature:1168113-1168220:1:exon
so has part: feature:1170510-1170686:1:exon
so has part: feature:1183153-1183233:1:exon
so has part: feature:1187329-1187521:1:exon
so has part: feature:1204740-1205276:1:exon
so has part: feature:1207658-1208273:1:exon

XP_055520809.1
type: Protein
SIO_000068: ncbiprotein

position:1106824:1
position: 1106824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1208273:1
position: 1208273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1106824-1106946:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133080-1133251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1168113-1168220:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1170510-1170686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1183153-1183233:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1187329-1187521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1204740-1205276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1207658-1208273:1:exon

LOC129715020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: LOC129715020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS-related transcription factor Elf-1-like isoform X1
translation: MNVLQFASNDMESAQEVRCSPHIARKDCPQNTSNSKKIFSLAGRSCIFPAVIVEQVPNADLMQDYSGLASDEETNGMINDSLLDIVEEQVIGEEITVPVEASCQNGEESMETIEAAEALLNMDSPGPAVDERRTTHMLMPSVSGVITAPFTHISMRADGVPEVVENAEAIILTEETAQQQMASESMEHTKKRKGRKPRPPRPSSPVANPDLPVKRKNNGKGNTIYLWEFLLALLQDRNTCPRYIKWTQREKGIFKLVDSKAVSRLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKEMPTNLIRFDDDGDDPSNISETRENSSQLTTYKLLATSESPSSVTILPSSMVMSCIQTQKPRVSSHVMMSSGMEALPHPSTAVNSMKATYVGETEQGSVHLLSPEMLRDVEPLHHAQQPNVLNTVQVVRSAPPRHDEKVNDGGIPLSAPVTLSTQSVRTIKSPSQVPVVVSPGAQRIGTVTLQTVPLTTVITSTDLAMSSPKFIFQTVPSSHQGTVLKENVTLQEKSLIAKIVTPTSLAVHGTSFRQVLPASPQLPDNTTHAVSLSSVMGAATPVVTFAATSQQVMNQPQGTVFTSVIKAPETKQTATQTVIKQEDQIEAMGTNPQSDHRIRQSHVIVLTNTAVLPNHVLFGAGEHREVDTQ
SIO_010081: LOC129715020
subclass of: SO_0000673
so part of: LOC129715020
location: join(1106824..1106946,1133080..1133251,1168113..1168220,1170510..1170686,1183153..1183233,1187329..1187521,1204740..1205276,1207658..1208273)
location: region:1106824-1208273:1
so has part: feature:1106824-1106946:1:exon
so has part: feature:1133080-1133251:1:exon
so has part: feature:1168113-1168220:1:exon
so has part: feature:1170510-1170686:1:exon
so has part: feature:1183153-1183233:1:exon
so has part: feature:1187329-1187521:1:exon
so has part: feature:1204740-1205276:1:exon
so has part: feature:1207658-1208273:1:exon

XP_055520810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1106824-1106946:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133080-1133251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1168113-1168220:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1170510-1170686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1183153-1183233:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1187329-1187521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1204740-1205276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1207658-1208273:1:exon

LOC129715020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: LOC129715020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS-related transcription factor Elf-1-like isoform X1
translation: MNVLQFASNDMESAQEVRCSPHIARKDCPQNTSNSKKIFSLAGRSCIFPAVIVEQVPNADLMQDYSGLASDEETNGMINDSLLDIVEEQVIGEEITVPVEASCQNGEESMETIEAAEALLNMDSPGPAVDERRTTHMLMPSVSGVITAPFTHISMRADGVPEVVENAEAIILTEETAQQQMASESMEHTKKRKGRKPRPPRPSSPVANPDLPVKRKNNGKGNTIYLWEFLLALLQDRNTCPRYIKWTQREKGIFKLVDSKAVSRLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKEMPTNLIRFDDDGDDPSNISETRENSSQLTTYKLLATSESPSSVTILPSSMVMSCIQTQKPRVSSHVMMSSGMEALPHPSTAVNSMKATYVGETEQGSVHLLSPEMLRDVEPLHHAQQPNVLNTVQVVRSAPPRHDEKVNDGGIPLSAPVTLSTQSVRTIKSPSQVPVVVSPGAQRIGTVTLQTVPLTTVITSTDLAMSSPKFIFQTVPSSHQGTVLKENVTLQEKSLIAKIVTPTSLAVHGTSFRQVLPASPQLPDNTTHAVSLSSVMGAATPVVTFAATSQQVMNQPQGTVFTSVIKAPETKQTATQTVIKQEDQIEAMGTNPQSDHRIRQSHVIVLTNTAVLPNHVLFGAGEHREVDTQ
SIO_010081: LOC129715020
subclass of: SO_0000673
so part of: LOC129715020
location: join(1106824..1106946,1133080..1133251,1168113..1168220,1170510..1170686,1183153..1183233,1187329..1187521,1204740..1205276,1207658..1208273)
location: region:1106824-1208273:1
so has part: feature:1106824-1106946:1:exon
so has part: feature:1133080-1133251:1:exon
so has part: feature:1168113-1168220:1:exon
so has part: feature:1170510-1170686:1:exon
so has part: feature:1183153-1183233:1:exon
so has part: feature:1187329-1187521:1:exon
so has part: feature:1204740-1205276:1:exon
so has part: feature:1207658-1208273:1:exon

XP_055520811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1106824-1106946:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133080-1133251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1168113-1168220:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1170510-1170686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1183153-1183233:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1187329-1187521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1204740-1205276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1207658-1208273:1:exon

LOC129715020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: LOC129715020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS-related transcription factor Elf-1-like isoform X2
translation: MNVLQFASNDMESAQEAGRSCIFPAVIVEQVPNADLMQDYSGLASDEETNGMINDSLLDIVEEQVIGEEITVPVEASCQNGEESMETIEAAEALLNMDSPGPAVDERRTTHMLMPSVSGVITAPFTHISMRADGVPEVVENAEAIILTEETAQQQMASESMEHTKKRKGRKPRPPRPSSPVANPDLPVKRKNNGKGNTIYLWEFLLALLQDRNTCPRYIKWTQREKGIFKLVDSKAVSRLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKEMPTNLIRFDDDGDDPSNISETRENSSQLTTYKLLATSESPSSVTILPSSMVMSCIQTQKPRVSSHVMMSSGMEALPHPSTAVNSMKATYVGETEQGSVHLLSPEMLRDVEPLHHAQQPNVLNTVQVVRSAPPRHDEKVNDGGIPLSAPVTLSTQSVRTIKSPSQVPVVVSPGAQRIGTVTLQTVPLTTVITSTDLAMSSPKFIFQTVPSSHQGTVLKENVTLQEKSLIAKIVTPTSLAVHGTSFRQVLPASPQLPDNTTHAVSLSSVMGAATPVVTFAATSQQVMNQPQGTVFTSVIKAPETKQTATQTVIKQEDQIEAMGTNPQSDHRIRQSHVIVLTNTAVLPNHVLFGAGEHREVDTQ
SIO_010081: LOC129715020
subclass of: SO_0000673
so part of: LOC129715020
location: join(1106824..1106871,1133080..1133251,1168113..1168220,1170510..1170686,1183153..1183233,1187329..1187521,1204740..1205276,1207658..1208273)
location: region:1106824-1208273:1
so has part: feature:1106824-1106871:1:exon
so has part: feature:1133080-1133251:1:exon
so has part: feature:1168113-1168220:1:exon
so has part: feature:1170510-1170686:1:exon
so has part: feature:1183153-1183233:1:exon
so has part: feature:1187329-1187521:1:exon
so has part: feature:1204740-1205276:1:exon
so has part: feature:1207658-1208273:1:exon

XP_055520813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1106824-1106871:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1133080-1133251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1168113-1168220:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1170510-1170686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1183153-1183233:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1187329-1187521:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1204740-1205276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1207658-1208273:1:exon

LOC129715020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: LOC129715020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS-related transcription factor Elf-1-like isoform X3
translation: MQDYSGLASDEETNGMINDSLLDIVEEQVIGEEITVPVEASCQNGEESMETIEAAEALLNMDSPGPAVDERRTTHMLMPSVSGVITAPFTHISMRADGVPEVVENAEAIILTEETAQQQMASESMEHTKKRKGRKPRPPRPSSPVANPDLPVKRKNNGKGNTIYLWEFLLALLQDRNTCPRYIKWTQREKGIFKLVDSKAVSRLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKEMPTNLIRFDDDGDDPSNISETRENSSQLTTYKLLATSESPSSVTILPSSMVMSCIQTQKPRVSSHVMMSSGMEALPHPSTAVNSMKATYVGETEQGSVHLLSPEMLRDVEPLHHAQQPNVLNTVQVVRSAPPRHDEKVNDGGIPLSAPVTLSTQSVRTIKSPSQVPVVVSPGAQRIGTVTLQTVPLTTVITSTDLAMSSPKFIFQTVPSSHQGTVLKENVTLQEKSLIAKIVTPTSLAVHGTSFRQVLPASPQLPDNTTHAVSLSSVMGAATPVVTFAATSQQVMNQPQGTVFTSVIKAPETKQTATQTVIKQEDQIEAMGTNPQSDHRIRQSHVIVLTNTAVLPNHVLFGAGEHREVDTQ
SIO_010081: LOC129715020
subclass of: SO_0000673
so part of: LOC129715020
location: join(1133140..1133251,1168113..1168220,1170510..1170686,1183153..1183233,1187329..1187521,1204740..1205276,1207658..1208273)
location: region:1133140-1208273:1
so has part: feature:1133140-1133251:1:exon
so has part: feature:1168113-1168220:1:exon
so has part: feature:1170510-1170686:1:exon
so has part: feature:1183153-1183233:1:exon
so has part: feature:1187329-1187521:1:exon
so has part: feature:1204740-1205276:1:exon
so has part: feature:1207658-1208273:1:exon

XP_055520814.1
type: Protein
SIO_000068: ncbiprotein

position:1133140:1
position: 1133140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133140-1133251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1168113-1168220:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1170510-1170686:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1183153-1183233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1187329-1187521:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1204740-1205276:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1207658-1208273:1:exon

LOC129715020
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: LOC129715020
product: ETS-related transcription factor Elf-1-like, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055664840.1
SIO_010081: LOC129715020
subclass of: SO_0000673
so part of: LOC129715020
location: join(1152478..1152944,1168113..1168220,1170510..1170686,1183153..1183233,1187329..1187521,1204740..1205276,1207658..1209261)
location: region:1152478-1209261:1
so has part: feature:1152478-1152944:1:exon
so has part: feature:1168113-1168220:1:exon
so has part: feature:1170510-1170686:1:exon
so has part: feature:1183153-1183233:1:exon
so has part: feature:1187329-1187521:1:exon
so has part: feature:1204740-1205276:1:exon
so has part: feature:1207658-1209261:1:exon

position:1152478:1
position: 1152478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152478-1152944:1:exon

position:1152944:1
position: 1152944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1168113-1168220:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1170510-1170686:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1183153-1183233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1187329-1187521:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1204740-1205276:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1207658-1209261:1:exon

LOC129715020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: LOC129715020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS-related transcription factor Elf-1-like isoform X4
translation: MATALYERHNQLDLLIQAVEASCQNGEESMETIEAAEALLNMDSPGPAVDERRTTHMLMPSVSGVITAPFTHISMRADGVPEVVENAEAIILTEETAQQQMASESMEHTKKRKGRKPRPPRPSSPVANPDLPVKRKNNGKGNTIYLWEFLLALLQDRNTCPRYIKWTQREKGIFKLVDSKAVSRLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKEMPTNLIRFDDDGDDPSNISETRENSSQLTTYKLLATSESPSSVTILPSSMVMSCIQTQKPRVSSHVMMSSGMEALPHPSTAVNSMKATYVGETEQGSVHLLSPEMLRDVEPLHHAQQPNVLNTVQVVRSAPPRHDEKVNDGGIPLSAPVTLSTQSVRTIKSPSQVPVVVSPGAQRIGTVTLQTVPLTTVITSTDLAMSSPKFIFQTVPSSHQGTVLKENVTLQEKSLIAKIVTPTSLAVHGTSFRQVLPASPQLPDNTTHAVSLSSVMGAATPVVTFAATSQQVMNQPQGTVFTSVIKAPETKQTATQTVIKQEDQIEAMGTNPQSDHRIRQSHVIVLTNTAVLPNHVLFGAGEHREVDTQ
SIO_010081: LOC129715020
subclass of: SO_0000673
so part of: LOC129715020
location: join(1152890..1152944,1168113..1168220,1170510..1170686,1183153..1183233,1187329..1187521,1204740..1205276,1207658..1208273)
location: region:1152890-1208273:1
so has part: feature:1152890-1152944:1:exon
so has part: feature:1168113-1168220:1:exon
so has part: feature:1170510-1170686:1:exon
so has part: feature:1183153-1183233:1:exon
so has part: feature:1187329-1187521:1:exon
so has part: feature:1204740-1205276:1:exon
so has part: feature:1207658-1208273:1:exon

XP_055520815.1
type: Protein
SIO_000068: ncbiprotein

position:1152890:1
position: 1152890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152890-1152944:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1168113-1168220:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1170510-1170686:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1183153-1183233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1187329-1187521:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1204740-1205276:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1207658-1208273:1:exon

LOC129715020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: LOC129715020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS-related transcription factor Elf-1-like isoform X5
translation: METIEAAEALLNMDSPGPAVDERRTTHMLMPSVSGVITAPFTHISMRADGVPEVVENAEAIILTEETAQQQMASESMEHTKKRKGRKPRPPRPSSPVANPDLPVKRKNNGKGNTIYLWEFLLALLQDRNTCPRYIKWTQREKGIFKLVDSKAVSRLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKEMPTNLIRFDDDGDDPSNISETRENSSQLTTYKLLATSESPSSVTILPSSMVMSCIQTQKPRVSSHVMMSSGMEALPHPSTAVNSMKATYVGETEQGSVHLLSPEMLRDVEPLHHAQQPNVLNTVQVVRSAPPRHDEKVNDGGIPLSAPVTLSTQSVRTIKSPSQVPVVVSPGAQRIGTVTLQTVPLTTVITSTDLAMSSPKFIFQTVPSSHQGTVLKENVTLQEKSLIAKIVTPTSLAVHGTSFRQVLPASPQLPDNTTHAVSLSSVMGAATPVVTFAATSQQVMNQPQGTVFTSVIKAPETKQTATQTVIKQEDQIEAMGTNPQSDHRIRQSHVIVLTNTAVLPNHVLFGAGEHREVDTQ
SIO_010081: LOC129715020
subclass of: SO_0000673
so part of: LOC129715020
location: join(1168145..1168220,1170510..1170686,1183153..1183233,1187329..1187521,1204740..1205276,1207658..1208273)
location: region:1168145-1208273:1
so has part: feature:1168145-1168220:1:exon
so has part: feature:1170510-1170686:1:exon
so has part: feature:1183153-1183233:1:exon
so has part: feature:1187329-1187521:1:exon
so has part: feature:1204740-1205276:1:exon
so has part: feature:1207658-1208273:1:exon

XP_055520816.1
type: Protein
SIO_000068: ncbiprotein

position:1168145:1
position: 1168145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1168145-1168220:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1170510-1170686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1183153-1183233:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1187329-1187521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1204740-1205276:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207658-1208273:1:exon

sugt1
type: Gene
subclass of: SO_0000704
RO_0002162: 7782
gene: sugt1
note: SGT1 homolog, MIS12 kinetochore complex assembly cochaperone; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1266979..1355306
location: region:1266979-1355306:1
so has part: feature:1266979-1355306:1:exon
subclass of: SO_0000010

129715021
type: Gene
SIO_000068: ncbigene

position:1266979:1
position: 1266979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1355306:1
position: 1355306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1266979-1355306:1:exon

sugt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: sugt1
product: SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055664843.1
SIO_010081: sugt1
subclass of: SO_0000673
so part of: sugt1
location: join(1266979..1267079,1267169..1267217,1271800..1271890,1272365..1272434,1284693..1284763,1291776..1291829,1294255..1294289,1298450..1298484,1324961..1325057,1327801..1327908,1340875..1340959,1350644..1350825,1354959..1355306)
location: region:1266979-1355306:1
so has part: feature:1266979-1267079:1:exon
so has part: feature:1267169-1267217:1:exon
so has part: feature:1271800-1271890:1:exon
so has part: feature:1272365-1272434:1:exon
so has part: feature:1284693-1284763:1:exon
so has part: feature:1291776-1291829:1:exon
so has part: feature:1294255-1294289:1:exon
so has part: feature:1298450-1298484:1:exon
so has part: feature:1324961-1325057:1:exon
so has part: feature:1327801-1327908:1:exon
so has part: feature:1340875-1340959:1:exon
so has part: feature:1350644-1350825:1:exon
so has part: feature:1354959-1355306:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1266979-1267079:1:exon

position:1267079:1
position: 1267079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1267169-1267217:1:exon

position:1267169:1
position: 1267169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267217:1
position: 1267217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1271800-1271890:1:exon

position:1271800:1
position: 1271800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1271890:1
position: 1271890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1272365-1272434:1:exon

position:1272365:1
position: 1272365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1272434:1
position: 1272434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1284693-1284763:1:exon

position:1284693:1
position: 1284693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1284763:1
position: 1284763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1291776-1291829:1:exon

position:1291776:1
position: 1291776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1291829:1
position: 1291829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1294255-1294289:1:exon

position:1294255:1
position: 1294255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1294289:1
position: 1294289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1298450-1298484:1:exon

position:1298450:1
position: 1298450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298484:1
position: 1298484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1324961-1325057:1:exon

position:1324961:1
position: 1324961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325057:1
position: 1325057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1327801-1327908:1:exon

position:1327801:1
position: 1327801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1327908:1
position: 1327908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1340875-1340959:1:exon

position:1340875:1
position: 1340875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1340959:1
position: 1340959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1350644-1350825:1:exon

position:1350644:1
position: 1350644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1350825:1
position: 1350825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1354959-1355306:1:exon

position:1354959:1
position: 1354959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sugt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: sugt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SGT1 homolog isoform X2
translation: MADERVFTDECVAECPEKAVEALNAAVELDLNVAENYCQRAYAHILLRNFKEVVKDASKALELKPNYALAHLRKGIAEYHLKMYQSSLESFTRGHELDAENDSFSSWIKTCKGHMESTGQQDGNNEEETHKHPMTTRQIKHDWYQTDSHIIITIMIKNANKDDVKVEFAEKSVSASVKFSPEDEYSLKLHLLHPVIVQCCAVKVLGAKIEIKMKKTEAMRWEKLEGVAPDVKHIMPEQPQPYPSSSHNTKNWDKLVMEIKKEENDEKPEGDAALNQLFQKIYADGSDEVKRAMNKSFTESGGTVLSTNWTEVGTKPVAVNPPDDMEWKKL
SIO_010081: sugt1
subclass of: SO_0000673
so part of: sugt1
location: join(1267066..1267079,1267169..1267217,1271800..1271890,1272365..1272434,1284693..1284763,1291776..1291829,1294255..1294289,1298450..1298484,1324961..1325057,1327801..1327908,1340875..1340959,1350644..1350825,1354959..1355060)
location: region:1267066-1355060:1
so has part: feature:1267066-1267079:1:exon
so has part: feature:1267169-1267217:1:exon
so has part: feature:1271800-1271890:1:exon
so has part: feature:1272365-1272434:1:exon
so has part: feature:1284693-1284763:1:exon
so has part: feature:1291776-1291829:1:exon
so has part: feature:1294255-1294289:1:exon
so has part: feature:1298450-1298484:1:exon
so has part: feature:1324961-1325057:1:exon
so has part: feature:1327801-1327908:1:exon
so has part: feature:1340875-1340959:1:exon
so has part: feature:1350644-1350825:1:exon
so has part: feature:1354959-1355060:1:exon

XP_055520818.1
type: Protein
SIO_000068: ncbiprotein

position:1267066:1
position: 1267066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1355060:1
position: 1355060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267066-1267079:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1267169-1267217:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1271800-1271890:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1272365-1272434:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284693-1284763:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1291776-1291829:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294255-1294289:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1298450-1298484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1324961-1325057:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1327801-1327908:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1340875-1340959:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1350644-1350825:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1354959-1355060:1:exon

sugt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: sugt1
product: SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055664842.1
SIO_010081: sugt1
subclass of: SO_0000673
so part of: sugt1
location: join(1267171..1267217,1268075..1268121,1268268..1268308,1271800..1271890,1272365..1272434,1284693..1284763,1291776..1291829,1294255..1294289,1298450..1298484,1324961..1325057,1327801..1327908,1340875..1340959,1350644..1350825,1354959..1355306)
location: region:1267171-1355306:1
so has part: feature:1267171-1267217:1:exon
so has part: feature:1268075-1268121:1:exon
so has part: feature:1268268-1268308:1:exon
so has part: feature:1271800-1271890:1:exon
so has part: feature:1272365-1272434:1:exon
so has part: feature:1284693-1284763:1:exon
so has part: feature:1291776-1291829:1:exon
so has part: feature:1294255-1294289:1:exon
so has part: feature:1298450-1298484:1:exon
so has part: feature:1324961-1325057:1:exon
so has part: feature:1327801-1327908:1:exon
so has part: feature:1340875-1340959:1:exon
so has part: feature:1350644-1350825:1:exon
so has part: feature:1354959-1355306:1:exon

position:1267171:1
position: 1267171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267171-1267217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1268075-1268121:1:exon

position:1268075:1
position: 1268075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268121:1
position: 1268121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1268268-1268308:1:exon

position:1268268:1
position: 1268268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268308:1
position: 1268308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1271800-1271890:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1272365-1272434:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1284693-1284763:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1291776-1291829:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294255-1294289:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1298450-1298484:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1324961-1325057:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1327801-1327908:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1340875-1340959:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1350644-1350825:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1354959-1355306:1:exon

sugt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: sugt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SGT1 homolog isoform X1
translation: MVTPTSTENFSYHPIERAVGVGQTLALNAAVELDLNVAENYCQRAYAHILLRNFKEVVKDASKALELKPNYALAHLRKGIAEYHLKMYQSSLESFTRGHELDAENDSFSSWIKTCKGHMESTGQQDGNNEEETHKHPMTTRQIKHDWYQTDSHIIITIMIKNANKDDVKVEFAEKSVSASVKFSPEDEYSLKLHLLHPVIVQCCAVKVLGAKIEIKMKKTEAMRWEKLEGVAPDVKHIMPEQPQPYPSSSHNTKNWDKLVMEIKKEENDEKPEGDAALNQLFQKIYADGSDEVKRAMNKSFTESGGTVLSTNWTEVGTKPVAVNPPDDMEWKKL
SIO_010081: sugt1
subclass of: SO_0000673
so part of: sugt1
location: join(1268088..1268121,1268268..1268308,1271800..1271890,1272365..1272434,1284693..1284763,1291776..1291829,1294255..1294289,1298450..1298484,1324961..1325057,1327801..1327908,1340875..1340959,1350644..1350825,1354959..1355060)
location: region:1268088-1355060:1
so has part: feature:1268088-1268121:1:exon
so has part: feature:1268268-1268308:1:exon
so has part: feature:1271800-1271890:1:exon
so has part: feature:1272365-1272434:1:exon
so has part: feature:1284693-1284763:1:exon
so has part: feature:1291776-1291829:1:exon
so has part: feature:1294255-1294289:1:exon
so has part: feature:1298450-1298484:1:exon
so has part: feature:1324961-1325057:1:exon
so has part: feature:1327801-1327908:1:exon
so has part: feature:1340875-1340959:1:exon
so has part: feature:1350644-1350825:1:exon
so has part: feature:1354959-1355060:1:exon

XP_055520817.1
type: Protein
SIO_000068: ncbiprotein

position:1268088:1
position: 1268088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1268088-1268121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1268268-1268308:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1271800-1271890:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1272365-1272434:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284693-1284763:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1291776-1291829:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294255-1294289:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1298450-1298484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1324961-1325057:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1327801-1327908:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1340875-1340959:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1350644-1350825:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1354959-1355060:1:exon