Leucoraja erinacea ecotype New England chromosome 41, Leri_hhj_1, whole genome shotgun sequence.
type: Entry
definition: Leucoraja erinacea ecotype New England chromosome 41, Leri_hhj_1, whole genome shotgun sequence.
sequence version: NC_073417.1
sequence date: 2023-04-27
sequence: sequence
division: CON
label: NC_073417.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA955276
dblink: SAMN23457310
keyword: WGS
keyword: RefSeq
source: Leucoraja erinacea (little skate)
organism: Leucoraja erinacea
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Leucoraja.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM054047.1.\nAssembly name: Leri_hhj_1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Okinawa Institute of Science\nand Technology on 2023/02/22. The original whole-genome shotgun\nproject has the accession JAMYXN000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Okinawa Institute of Science and\n Technology\nAssembly Date :: 21-FEB-2019\nAssembly Method :: dbg2olc v. 20160205\nAssembly Name :: Leri_hhj_1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 150.0x\nSequencing Technology :: Illumina; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_028641065.1-RS_2023_04\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 04/21/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 2392175
topology: linear
so has quality: SO_0000987
location: 1..2392175
location: region:1-2392175:1
RO_0002162: 7782

NC_073417
type: RefSeq
SIO_000068: refseq

PRJNA955276
type: BioProject
SIO_000068: bioproject

SAMN23457310
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2392175:1
position: 2392175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2392175:1:source
so part of: sequence
organism: Leucoraja erinacea
mol type: genomic DNA
specimen voucher: LE0618
chromosome: 41
tissue type: liver
dev stage: adult
ecotype: New England

7782
type: Taxonomy
SIO_000068: taxonomy

LOC129714799
type: Gene
subclass of: SO_0000704
RO_0002162: 7782
gene: LOC129714799
note: teneurin-3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1096392..1230313
location: region:1096392-1230313:1
so has part: feature:1096392-1230313:1:exon
subclass of: SO_0000010

129714799
type: Gene
SIO_000068: ncbigene

position:1096392:1
position: 1096392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1230313:1
position: 1230313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1096392-1230313:1:exon

LOC129714799
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: LOC129714799
product: teneurin-3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_055664645.1
SIO_010081: LOC129714799
subclass of: SO_0000673
so part of: LOC129714799
location: join(1096392..1097214,1189698..1189987,1216151..1216511,1222300..1222333,1224340..1224489,1230209..1230313)
location: region:1096392-1230313:1
so has part: feature:1096392-1097214:1:exon
so has part: feature:1189698-1189987:1:exon
so has part: feature:1216151-1216511:1:exon
so has part: feature:1222300-1222333:1:exon
so has part: feature:1224340-1224489:1:exon
so has part: feature:1230209-1230313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1096392-1097214:1:exon

position:1097214:1
position: 1097214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1189698-1189987:1:exon

position:1189698:1
position: 1189698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189987:1
position: 1189987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1216151-1216511:1:exon

position:1216151:1
position: 1216151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1216511:1
position: 1216511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1222300-1222333:1:exon

position:1222300:1
position: 1222300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222333:1
position: 1222333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1224340-1224489:1:exon

position:1224340:1
position: 1224340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1224489:1
position: 1224489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1230209-1230313:1:exon

position:1230209:1
position: 1230209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC129714799
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: LOC129714799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teneurin-3
translation: MDVKERRPYCSLTKNRRDKERRYTSSSVDKDHCRVPTQKSYSSSETLKAYDHDNRLLYGGRVKDLVHREVDEFTRPGVNFSLRELGICEPAARRGLTFCSEMGLPHRGYSVNTGSDADTENEGVMSPEHAMRLWGRGAKSGRNSCLSSRSNSALTLTDTEHENKSDSENGEWTTPLSRDITTPSLSSSPSLTPSLCSYIFRYSVVLQQRAAPRQVRFSHHTGTPVAVSAGGICALQPRLWYSGPSGARRSVPIANVLTDVSIKLIDCTQILIERVNFTQTLPRTRLYCEAPA
SIO_010081: LOC129714799
subclass of: SO_0000673
so part of: LOC129714799
location: join(1189759..1189987,1216151..1216511,1222300..1222333,1224340..1224489,1230209..1230313)
location: region:1189759-1230313:1
so has part: feature:1189759-1189987:1:exon
so has part: feature:1216151-1216511:1:exon
so has part: feature:1222300-1222333:1:exon
so has part: feature:1224340-1224489:1:exon
so has part: feature:1230209-1230313:1:exon

XP_055520620.1
type: Protein
SIO_000068: ncbiprotein

position:1189759:1
position: 1189759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1189759-1189987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1216151-1216511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1222300-1222333:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1224340-1224489:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1230209-1230313:1:exon

LOC129714804
type: Gene
subclass of: SO_0000704
RO_0002162: 7782
gene: LOC129714804
note: uncharacterized LOC129714804; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1333062..1469836
location: region:1333062-1469836:1
so has part: feature:1333062-1469836:1:exon
subclass of: SO_0000011

129714804
type: Gene
SIO_000068: ncbigene

position:1333062:1
position: 1333062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469836:1
position: 1469836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1333062-1469836:1:exon

LOC129714804
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7782
nc RNA class: lncRNA
gene: LOC129714804
product: uncharacterized LOC129714804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008726393.1
SIO_010081: LOC129714804
subclass of: SO_0000673
so part of: LOC129714804
location: join(1333062..1333175,1420539..1420733,1469469..1469836)
location: region:1333062-1469836:1
so has part: feature:1333062-1333175:1:exon
so has part: feature:1420539-1420733:1:exon
so has part: feature:1469469-1469836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1333062-1333175:1:exon

position:1333175:1
position: 1333175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1420539-1420733:1:exon

position:1420539:1
position: 1420539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1420733:1
position: 1420733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1469469-1469836:1:exon

position:1469469:1
position: 1469469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC129714803
type: Gene
subclass of: SO_0000704
RO_0002162: 7782
gene: LOC129714803
note: teneurin-3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1538346..1820781
location: region:1538346-1820781:1
so has part: feature:1538346-1820781:1:exon
subclass of: SO_0000010

129714803
type: Gene
SIO_000068: ncbigene

position:1538346:1
position: 1538346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1820781:1
position: 1820781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1538346-1820781:1:exon

LOC129714803
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: LOC129714803
product: teneurin-3-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_055664649.1
SIO_010081: LOC129714803
subclass of: SO_0000673
so part of: LOC129714803
location: join(1538346..1538572,1580769..1581006,1608670..1608768,1621285..1621523,1634462..1634584,1649755..1649969,1664611..1664821,1666011..1666112,1667620..1667814,1673135..1673335,1679654..1679839,1713087..1713233,1728268..1728484,1735092..1735211,1738350..1738611,1744420..1744687,1748702..1748845,1758814..1759063,1761857..1761877,1778272..1778505,1780442..1780596,1791286..1792160,1797531..1797706,1799772..1800007,1806437..1806733,1808259..1809870,1815939..1816069,1819017..1820781)
location: region:1538346-1820781:1
so has part: feature:1538346-1538572:1:exon
so has part: feature:1580769-1581006:1:exon
so has part: feature:1608670-1608768:1:exon
so has part: feature:1621285-1621523:1:exon
so has part: feature:1634462-1634584:1:exon
so has part: feature:1649755-1649969:1:exon
so has part: feature:1664611-1664821:1:exon
so has part: feature:1666011-1666112:1:exon
so has part: feature:1667620-1667814:1:exon
so has part: feature:1673135-1673335:1:exon
so has part: feature:1679654-1679839:1:exon
so has part: feature:1713087-1713233:1:exon
so has part: feature:1728268-1728484:1:exon
so has part: feature:1735092-1735211:1:exon
so has part: feature:1738350-1738611:1:exon
so has part: feature:1744420-1744687:1:exon
so has part: feature:1748702-1748845:1:exon
so has part: feature:1758814-1759063:1:exon
so has part: feature:1761857-1761877:1:exon
so has part: feature:1778272-1778505:1:exon
so has part: feature:1780442-1780596:1:exon
so has part: feature:1791286-1792160:1:exon
so has part: feature:1797531-1797706:1:exon
so has part: feature:1799772-1800007:1:exon
so has part: feature:1806437-1806733:1:exon
so has part: feature:1808259-1809870:1:exon
so has part: feature:1815939-1816069:1:exon
so has part: feature:1819017-1820781:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1538346-1538572:1:exon

position:1538572:1
position: 1538572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1580769-1581006:1:exon

position:1580769:1
position: 1580769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581006:1
position: 1581006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1608670-1608768:1:exon

position:1608670:1
position: 1608670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1608768:1
position: 1608768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1621285-1621523:1:exon

position:1621285:1
position: 1621285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1621523:1
position: 1621523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1634462-1634584:1:exon

position:1634462:1
position: 1634462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1634584:1
position: 1634584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1649755-1649969:1:exon

position:1649755:1
position: 1649755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1649969:1
position: 1649969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1664611-1664821:1:exon

position:1664611:1
position: 1664611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1664821:1
position: 1664821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1666011-1666112:1:exon

position:1666011:1
position: 1666011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1666112:1
position: 1666112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1667620-1667814:1:exon

position:1667620:1
position: 1667620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1667814:1
position: 1667814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1673135-1673335:1:exon

position:1673135:1
position: 1673135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1673335:1
position: 1673335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1679654-1679839:1:exon

position:1679654:1
position: 1679654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1679839:1
position: 1679839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1713087-1713233:1:exon

position:1713087:1
position: 1713087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1713233:1
position: 1713233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1728268-1728484:1:exon

position:1728268:1
position: 1728268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1728484:1
position: 1728484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1735092-1735211:1:exon

position:1735092:1
position: 1735092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1735211:1
position: 1735211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1738350-1738611:1:exon

position:1738350:1
position: 1738350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1738611:1
position: 1738611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1744420-1744687:1:exon

position:1744420:1
position: 1744420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1744687:1
position: 1744687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1748702-1748845:1:exon

position:1748702:1
position: 1748702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1748845:1
position: 1748845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1758814-1759063:1:exon

position:1758814:1
position: 1758814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1759063:1
position: 1759063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1761857-1761877:1:exon

position:1761857:1
position: 1761857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1761877:1
position: 1761877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1778272-1778505:1:exon

position:1778272:1
position: 1778272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1778505:1
position: 1778505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1780442-1780596:1:exon

position:1780442:1
position: 1780442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1780596:1
position: 1780596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1791286-1792160:1:exon

position:1791286:1
position: 1791286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1792160:1
position: 1792160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1797531-1797706:1:exon

position:1797531:1
position: 1797531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1797706:1
position: 1797706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1799772-1800007:1:exon

position:1799772:1
position: 1799772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1800007:1
position: 1800007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1806437-1806733:1:exon

position:1806437:1
position: 1806437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1806733:1
position: 1806733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1808259-1809870:1:exon

position:1808259:1
position: 1808259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1809870:1
position: 1809870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1815939-1816069:1:exon

position:1815939:1
position: 1815939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1816069:1
position: 1816069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1819017-1820781:1:exon

position:1819017:1
position: 1819017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC129714803
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: LOC129714803
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: teneurin-3-like
translation: MPSSYTSPSPASTRRPASPVPPSPFANGKPRRVVVAKGGGLLPPAPASDTDDEETFANSYLAQATAGTACGLNHEQPANHQSQASLQPLPPVLKPHLGQQPPAVTSLSRNSVSQRRTQSPAPVAAPPSELPTTPESVQLQDSWVLGSNVPLETRKLAKQAVLENGHDNLIEMDVFTPPCHDGSYGDGHFLFKTGTGTTPLFSTASPGYTMASSAVYSPPPRPLPRNTLSRSAFKFKKTSKYCSWKCTALCAVGVSVILAVLLSYFIAMHLLGLNWQLQQVDNYTFENGRVKTESSPTNVVTATSPDGGKFGFPHQENNTIDSGEVDLGRRAIQEVPPGVFWRAQLYVDQPQFLKFNISLPKDALIGVYGRKGLPPSHTQYDFVELLDGSRLIAREKRSLSSPEHKSRQVRAVSVQEAGFVQYLDSGVWHLAFYNDGKTAEHVSFNTIAIDSVMECPRNCHGNGECVSGACHCFPGFFGSDCARATCPILCSGNGQYSKGRCICFSGWKGTECDVPSGQCIDPLCAAHGICIMGSCVCNSGYKGEICEQADCFDPTCSNHGVCIHGECHCSPGWGGANCEKSKTMCPDQCAGHGTYLQESDSCTCDPNWTGADCSVEICPVECGTHGVCLAGACRCEEGWTGATCEQRACHPRCLEHGTCIDGKCQCNQGWNGEHCTIEGCPGLCNSNGRCTLDQNGWHCVCQVGWRGAGCDVAMETLCSDGKDNEGDGLVDCMDPDCCLHNACQNQPYCRGSPDPLDIIGQSQQQPPQQAARSFHDRIKFLIEPDSSHILPGENPFNSSLSSVIRGQVLTADGTPLIGVNVSFLHYPQYGYTITRHDGMFDLLANGGASLTLCFERLPFITRHHTVWIPWNVFYVMDTMIMKKEENEIPSCDLSGFVRPNPNILASPLSTFFRTSSSESPIIPETQVLHEETDIPGTDVKLMYLSSRAAGYKPVLKITMTQSTMPFNLMKVHLMVAVVGRLFQKWFPASPNLAYTFIWDKTDAYNQKVYGLSEAVVSVGYEYESCLDLILWEKRTAILQGYELDPANMGGWSLNKHHVLDVQNGILYKGNGENQFISQQPAVISCIMGNGRRRSISCPSCNGQSDGNKLLAPVALACGIDGSLYIGDFNYIRRVFPSGNVTSILELRNKDFRHSNNPAHRYYLATDPVTGDLYISDTSTRRIYHPKSLSGDKDVTANSEVTAGTGEQCLPFDEARCGDGGKAVEASLMSPKGIAIDKNGLMYFVDGTMIRKVDQNGIISTLLGSNDLTSARPLTCDTTMHISQVRLEWPTDLAINPMDNSLYVLDNNIVLQISDNHQVRIAAGRPMHCQVPGVEYSLGKRAVHTTLESASAISVSYSGVLYIAETDEKKINQVRQVTTDGEISVLAGAPSDCDCKNDVNCDCYQTGDGYAKDARLNSPSSLAVSPDGTLYIADMGNIRIRAASKNKPLLTSANVYKVASPSEQELYIFDANGTHQYTQSLITGDHLYNFTYSNENDITAVIDNNGNTLRIRRDPNRMPVRIVSPDNQVIWLTISTTGGLKGMTAQGQELVLLTYHTYTGLLATKSDKTGWTTFFNYDSEGRLTNVTFPTGVVSNLQGEMEKAITVNIESSSREDDVTITTNLSSVDAFYTLVQDQLRNSYQVGYDSSLRVMYANGMDTSFQTEPHILAGTVNPIIARRNVTLPLENSLNLVEWRFRKEQARGKVSVFGRKLRVNGRNLLSIDFDRTTRTEKIYDDHRKFQLRILYDQSGHPTLWLPSSRLVAVNITYSSTGQIAGIQRGPLGEKIEYDAQGRIVSRVLTDGKTWSYTYLDKSMVLLLHSQRQYIFEYDLLDRLSAVTMPSVARHTMQTIRSVGYYRNIYNPPESNASMLADYSESGLLLQTAYLGTGRRVLYKYRRTSKLSELLYDSTRVSFGYDEAAGVLKTVNLQSEGFICTIRYRQVGPLVDRQIFRFSEDGMVNARFDYSYDNNFRVTSMQAVINETPLPIDLYQFDDISGKVEQF…
SIO_010081: LOC129714803
subclass of: SO_0000673
so part of: LOC129714803
location: join(1538350..1538572,1580769..1581006,1608670..1608768,1621285..1621523,1634462..1634584,1649755..1649969,1664611..1664821,1666011..1666112,1667620..1667814,1673135..1673335,1679654..1679839,1713087..1713233,1728268..1728484,1735092..1735211,1738350..1738611,1744420..1744687,1748702..1748845,1758814..1759063,1761857..1761877,1778272..1778505,1780442..1780596,1791286..1792160,1797531..1797706,1799772..1800007,1806437..1806733,1808259..1809870,1815939..1816069,1819017..1819772)
location: region:1538350-1819772:1
so has part: feature:1538350-1538572:1:exon
so has part: feature:1580769-1581006:1:exon
so has part: feature:1608670-1608768:1:exon
so has part: feature:1621285-1621523:1:exon
so has part: feature:1634462-1634584:1:exon
so has part: feature:1649755-1649969:1:exon
so has part: feature:1664611-1664821:1:exon
so has part: feature:1666011-1666112:1:exon
so has part: feature:1667620-1667814:1:exon
so has part: feature:1673135-1673335:1:exon
so has part: feature:1679654-1679839:1:exon
so has part: feature:1713087-1713233:1:exon
so has part: feature:1728268-1728484:1:exon
so has part: feature:1735092-1735211:1:exon
so has part: feature:1738350-1738611:1:exon
so has part: feature:1744420-1744687:1:exon
so has part: feature:1748702-1748845:1:exon
so has part: feature:1758814-1759063:1:exon
so has part: feature:1761857-1761877:1:exon
so has part: feature:1778272-1778505:1:exon
so has part: feature:1780442-1780596:1:exon
so has part: feature:1791286-1792160:1:exon
so has part: feature:1797531-1797706:1:exon
so has part: feature:1799772-1800007:1:exon
so has part: feature:1806437-1806733:1:exon
so has part: feature:1808259-1809870:1:exon
so has part: feature:1815939-1816069:1:exon
so has part: feature:1819017-1819772:1:exon

XP_055520624.1
type: Protein
SIO_000068: ncbiprotein

position:1538350:1
position: 1538350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1819772:1
position: 1819772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1538350-1538572:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1580769-1581006:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1608670-1608768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1621285-1621523:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1634462-1634584:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1649755-1649969:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1664611-1664821:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1666011-1666112:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1667620-1667814:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1673135-1673335:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1679654-1679839:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1713087-1713233:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1728268-1728484:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1735092-1735211:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1738350-1738611:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1744420-1744687:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1748702-1748845:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1758814-1759063:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1761857-1761877:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1778272-1778505:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1780442-1780596:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1791286-1792160:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1797531-1797706:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1799772-1800007:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1806437-1806733:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1808259-1809870:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1815939-1816069:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1819017-1819772:1:exon

LOC129714802
type: Gene
subclass of: SO_0000704
RO_0002162: 7782
gene: LOC129714802
note: uncharacterized LOC129714802; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1825638..1828270
location: region:1825638-1828270:1
so has part: feature:1825638-1828270:1:exon
subclass of: SO_0000011

129714802
type: Gene
SIO_000068: ncbigene

position:1825638:1
position: 1825638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1828270:1
position: 1828270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1825638-1828270:1:exon

LOC129714802
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7782
nc RNA class: lncRNA
gene: LOC129714802
product: uncharacterized LOC129714802
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008726392.1
SIO_010081: LOC129714802
subclass of: SO_0000673
so part of: LOC129714802
location: join(1825638..1826383,1826468..1826647,1827807..1828270)
location: region:1825638-1828270:1
so has part: feature:1825638-1826383:1:exon
so has part: feature:1826468-1826647:1:exon
so has part: feature:1827807-1828270:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1825638-1826383:1:exon

position:1826383:1
position: 1826383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1826468-1826647:1:exon

position:1826468:1
position: 1826468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1826647:1
position: 1826647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1827807-1828270:1:exon

position:1827807:1
position: 1827807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dctd
type: Gene
subclass of: SO_0000704
RO_0002162: 7782
gene: dctd
note: dCMP deaminase; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1887309..1965205)
location: region:1887309-1965205:-1
so has part: feature:1887309-1965205:-1:exon
subclass of: SO_0000010

129714796
type: Gene
SIO_000068: ncbigene

position:1887309:-1
position: 1887309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1965205:-1
position: 1965205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1887309-1965205:-1:exon

dctd
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: dctd
product: dCMP deaminase, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055664641.1
SIO_010081: dctd
subclass of: SO_0000673
so part of: dctd
location: complement(join(1887309..1891215,1905606..1905702,1932169..1932285,1947413..1947548,1963048..1963156,1964914..1965205))
location: region:1887309-1965205:-1
so has part: feature:1964914-1965205:-1:exon
so has part: feature:1963048-1963156:-1:exon
so has part: feature:1947413-1947548:-1:exon
so has part: feature:1932169-1932285:-1:exon
so has part: feature:1905606-1905702:-1:exon
so has part: feature:1887309-1891215:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1964914-1965205:-1:exon

position:1964914:-1
position: 1964914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1963048-1963156:-1:exon

position:1963048:-1
position: 1963048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1963156:-1
position: 1963156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1947413-1947548:-1:exon

position:1947413:-1
position: 1947413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1947548:-1
position: 1947548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1932169-1932285:-1:exon

position:1932169:-1
position: 1932169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1932285:-1
position: 1932285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1905606-1905702:-1:exon

position:1905606:-1
position: 1905606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1905702:-1
position: 1905702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1887309-1891215:-1:exon

position:1891215:-1
position: 1891215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dctd
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7782
gene: dctd
product: dCMP deaminase, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008726391.1
SIO_010081: dctd
so part of: dctd
location: complement(join(1887309..1887372,1891001..1891215,1905606..1905702,1932169..1932285,1947413..1947548,1963048..1963156,1964914..1965185))
location: region:1887309-1965185:-1
so has part: feature:1964914-1965185:-1:exon
so has part: feature:1963048-1963156:-1:exon
so has part: feature:1947413-1947548:-1:exon
so has part: feature:1932169-1932285:-1:exon
so has part: feature:1905606-1905702:-1:exon
so has part: feature:1891001-1891215:-1:exon
so has part: feature:1887309-1887372:-1:exon

position:1965185:-1
position: 1965185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1964914-1965185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1963048-1963156:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1947413-1947548:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1932169-1932285:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1905606-1905702:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1891001-1891215:-1:exon

position:1891001:-1
position: 1891001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1887309-1887372:-1:exon

position:1887372:-1
position: 1887372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dctd
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: dctd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deoxycytidylate deaminase
translation: MASTVTHVILRVFRRVVYLAPLGSLVVCVREGPRVCGTGTQGRTEVAAGAGDRSLKTRGSRSCCLGGRTMLEGEAGEQELQLRSDRGDGAAGKKREDYLECSEYFMAVAFLSAQRSKDPNSQVGACIVNPENKIVGIGYNGMPNGCSDDSLPWARNAKNKLDTKYMYVCHAELNAILNKNASDVKGCTMYVALFPCNECAKLIIQSGISKVVYMSDKYRDKPEMKASRLMLDMANVKCSQFTPKNKTITIDFDTINKSGSCLDSCKVAAPASPSSC
SIO_010081: dctd
subclass of: SO_0000673
so part of: dctd
location: complement(join(1891101..1891215,1905606..1905702,1932169..1932285,1947413..1947548,1963048..1963156,1964914..1965170))
location: region:1891101-1965170:-1
so has part: feature:1964914-1965170:-1:exon
so has part: feature:1963048-1963156:-1:exon
so has part: feature:1947413-1947548:-1:exon
so has part: feature:1932169-1932285:-1:exon
so has part: feature:1905606-1905702:-1:exon
so has part: feature:1891101-1891215:-1:exon

XP_055520616.1
type: Protein
SIO_000068: ncbiprotein

position:1891101:-1
position: 1891101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1965170:-1
position: 1965170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1964914-1965170:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1963048-1963156:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1947413-1947548:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1932169-1932285:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1905606-1905702:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1891101-1891215:-1:exon

LOC129714800
type: Gene
subclass of: SO_0000704
RO_0002162: 7782
gene: LOC129714800
note: protein WWC2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1988748..2124327
location: region:1988748-2124327:1
so has part: feature:1988748-2124327:1:exon
subclass of: SO_0000010

129714800
type: Gene
SIO_000068: ncbigene

position:1988748:1
position: 1988748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2124327:1
position: 2124327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1988748-2124327:1:exon

LOC129714800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: LOC129714800
product: protein WWC2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_055664646.1
SIO_010081: LOC129714800
subclass of: SO_0000673
so part of: LOC129714800
location: join(1988748..1989222,2020646..2020755,2031021..2031224,2033793..2033869,2039608..2039687,2046308..2046437,2048206..2048352,2048987..2049060,2052924..2053166,2055532..2055621,2056979..2057565,2085380..2085503,2098328..2098408,2102407..2102493,2104851..2105043,2106226..2106390,2107975..2108054,2111676..2111838,2113287..2113451,2114376..2114468,2118352..2118591,2122620..2122747,2123502..2124327)
location: region:1988748-2124327:1
so has part: feature:1988748-1989222:1:exon
so has part: feature:2020646-2020755:1:exon
so has part: feature:2031021-2031224:1:exon
so has part: feature:2033793-2033869:1:exon
so has part: feature:2039608-2039687:1:exon
so has part: feature:2046308-2046437:1:exon
so has part: feature:2048206-2048352:1:exon
so has part: feature:2048987-2049060:1:exon
so has part: feature:2052924-2053166:1:exon
so has part: feature:2055532-2055621:1:exon
so has part: feature:2056979-2057565:1:exon
so has part: feature:2085380-2085503:1:exon
so has part: feature:2098328-2098408:1:exon
so has part: feature:2102407-2102493:1:exon
so has part: feature:2104851-2105043:1:exon
so has part: feature:2106226-2106390:1:exon
so has part: feature:2107975-2108054:1:exon
so has part: feature:2111676-2111838:1:exon
so has part: feature:2113287-2113451:1:exon
so has part: feature:2114376-2114468:1:exon
so has part: feature:2118352-2118591:1:exon
so has part: feature:2122620-2122747:1:exon
so has part: feature:2123502-2124327:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1988748-1989222:1:exon

position:1989222:1
position: 1989222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2020646-2020755:1:exon

position:2020646:1
position: 2020646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2020755:1
position: 2020755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2031021-2031224:1:exon

position:2031021:1
position: 2031021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2031224:1
position: 2031224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2033793-2033869:1:exon

position:2033793:1
position: 2033793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2033869:1
position: 2033869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2039608-2039687:1:exon

position:2039608:1
position: 2039608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2039687:1
position: 2039687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2046308-2046437:1:exon

position:2046308:1
position: 2046308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2046437:1
position: 2046437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2048206-2048352:1:exon

position:2048206:1
position: 2048206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2048352:1
position: 2048352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2048987-2049060:1:exon

position:2048987:1
position: 2048987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2049060:1
position: 2049060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2052924-2053166:1:exon

position:2052924:1
position: 2052924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2053166:1
position: 2053166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2055532-2055621:1:exon

position:2055532:1
position: 2055532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2055621:1
position: 2055621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2056979-2057565:1:exon

position:2056979:1
position: 2056979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2057565:1
position: 2057565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2085380-2085503:1:exon

position:2085380:1
position: 2085380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2085503:1
position: 2085503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2098328-2098408:1:exon

position:2098328:1
position: 2098328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2098408:1
position: 2098408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2102407-2102493:1:exon

position:2102407:1
position: 2102407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2102493:1
position: 2102493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2104851-2105043:1:exon

position:2104851:1
position: 2104851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2105043:1
position: 2105043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2106226-2106390:1:exon

position:2106226:1
position: 2106226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2106390:1
position: 2106390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2107975-2108054:1:exon

position:2107975:1
position: 2107975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2108054:1
position: 2108054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2111676-2111838:1:exon

position:2111676:1
position: 2111676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2111838:1
position: 2111838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2113287-2113451:1:exon

position:2113287:1
position: 2113287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2113451:1
position: 2113451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2114376-2114468:1:exon

position:2114376:1
position: 2114376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2114468:1
position: 2114468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2118352-2118591:1:exon

position:2118352:1
position: 2118352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2118591:1
position: 2118591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2122620-2122747:1:exon

position:2122620:1
position: 2122620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2122747:1
position: 2122747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2123502-2124327:1:exon

position:2123502:1
position: 2123502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC129714800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: LOC129714800
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein WWC2-like
translation: MHRRGNGELPLPDGWKVSRDYDGRVFYIDHISKQTSWVDPRDRFTKPLTFADCVGDELPLGWEDAYDDQIGVFYIDHINKTTQLEDPRAWWRKEQERMLKDYLTVAEDALGTQKELYQVKEQRLALAIDEYVRLNDVWRDKTGSRTSLLSSSSSSTKYDPDILKAEVMTTKVRVNKLKREVSQMKQELFYKEQGFETLQEIDRKMSGVQNGYQLTEAKAIMSRLKTIKKDISTGEKEKQDLMQSLAKLRSRFQSNQHVGSSESDLQSNLGSSHLSIPRRCLDVGSQTNIIGDFGPKSQANLAESVRLSLQYEEAKRRIANIKIELSRLDSEAWPGLLDVERDKLMLMNEKEELLKELEFVTLRNCPSEECERLEQRRRRLEGELHSAPCNSTHALAQRLKLQEKRKRLVQQLEEVTQLTLFLHSQLKSLSASTLSLSSGSSLGSLASSRGSLNTSSRGSSLNSLSSAELYGSLSDQPALDPDTQYKLDFMLQEKAAYNPSAIATIHEHEVARGPGAVEPPLSSRSSLCSLSPPSSPLVSDVAFLPPAQDSPPHRPTGVSEERRAAWDFAFLAPYGDGSGDGESQALVEPGQVSHNLDPGIQGSGGQSSDEPEQPLTAPNNGNAGIDLERNAGGELLEEKVPCVSAAVSDESVAGDSGVYEASIKRPSETEDAIYDDDETSPLEAVQIQIGLKYDPNHGSFIIILIQLRNLTALLLPTGCKVYVRAALLPSPSDSSSLFRTKVQSVARTLVLREVFRVDIARAALRQKTLRVDVCTVGEARLDDCLAVTQISLADHGRGGDMSTCWYNMLLYENVDIQHSCSKAQRRGTSLTSQPCSTLDKDAVSVLLERMSVELLAVEKELVTPDRGLRLLGADRTGAGEEGGGSGVEVEERAAATLEPSQRECDKDRPGEREPSTTPPILVDKEMNTDESTVEYVSVRTKERASLGQRHNNFVRSSMIVRSQTFSPGERNQYICRLNRSDSDSSTLARRSPFVRNAKERRSLRVKRPLCQPLVRRMAEPPVHTSLDLELDLQASLTRQCRLNDELRRLRELKTRLEEVKAKGETRLPAWAVEDGRFQKLLKQAEKQAGQSKEDQRKEWRTEKMMRQASKEVCRLREQSHKELQQVHTFREKMAFFTRAKISVPSLPADDV
SIO_010081: LOC129714800
subclass of: SO_0000673
so part of: LOC129714800
location: join(1989095..1989222,2020646..2020755,2031021..2031224,2033793..2033869,2039608..2039687,2046308..2046437,2048206..2048352,2048987..2049060,2052924..2053166,2055532..2055621,2056979..2057565,2085380..2085503,2098328..2098408,2102407..2102493,2104851..2105043,2106226..2106390,2107975..2108054,2111676..2111838,2113287..2113451,2114376..2114468,2118352..2118591,2122620..2122747,2123502..2123568)
location: region:1989095-2123568:1
so has part: feature:1989095-1989222:1:exon
so has part: feature:2020646-2020755:1:exon
so has part: feature:2031021-2031224:1:exon
so has part: feature:2033793-2033869:1:exon
so has part: feature:2039608-2039687:1:exon
so has part: feature:2046308-2046437:1:exon
so has part: feature:2048206-2048352:1:exon
so has part: feature:2048987-2049060:1:exon
so has part: feature:2052924-2053166:1:exon
so has part: feature:2055532-2055621:1:exon
so has part: feature:2056979-2057565:1:exon
so has part: feature:2085380-2085503:1:exon
so has part: feature:2098328-2098408:1:exon
so has part: feature:2102407-2102493:1:exon
so has part: feature:2104851-2105043:1:exon
so has part: feature:2106226-2106390:1:exon
so has part: feature:2107975-2108054:1:exon
so has part: feature:2111676-2111838:1:exon
so has part: feature:2113287-2113451:1:exon
so has part: feature:2114376-2114468:1:exon
so has part: feature:2118352-2118591:1:exon
so has part: feature:2122620-2122747:1:exon
so has part: feature:2123502-2123568:1:exon

XP_055520621.1
type: Protein
SIO_000068: ncbiprotein

position:1989095:1
position: 1989095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2123568:1
position: 2123568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1989095-1989222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2020646-2020755:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2031021-2031224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2033793-2033869:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2039608-2039687:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2046308-2046437:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2048206-2048352:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2048987-2049060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2052924-2053166:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2055532-2055621:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2056979-2057565:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2085380-2085503:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2098328-2098408:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2102407-2102493:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2104851-2105043:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2106226-2106390:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2107975-2108054:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2111676-2111838:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2113287-2113451:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2114376-2114468:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2118352-2118591:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2122620-2122747:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2123502-2123568:1:exon

cdkn2aip
type: Gene
subclass of: SO_0000704
RO_0002162: 7782
gene: cdkn2aip
note: CDKN2A interacting protein; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2133842..2145629
location: region:2133842-2145629:1
so has part: feature:2133842-2145629:1:exon
subclass of: SO_0000010

129714805
type: Gene
SIO_000068: ncbigene

position:2133842:1
position: 2133842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2145629:1
position: 2145629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2133842-2145629:1:exon

cdkn2aip
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: cdkn2aip
product: CDKN2A interacting protein
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055664650.1
SIO_010081: cdkn2aip
subclass of: SO_0000673
so part of: cdkn2aip
location: join(2133842..2134131,2137734..2137864,2139981..2145629)
location: region:2133842-2145629:1
so has part: feature:2133842-2134131:1:exon
so has part: feature:2137734-2137864:1:exon
so has part: feature:2139981-2145629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2133842-2134131:1:exon

position:2134131:1
position: 2134131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2137734-2137864:1:exon

position:2137734:1
position: 2137734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2137864:1
position: 2137864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2139981-2145629:1:exon

position:2139981:1
position: 2139981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cdkn2aip
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: cdkn2aip
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDKN2A-interacting protein
translation: MAADEETDELLRERPALAAWLETLRGGSENQRHWEARRRFIINNLPAAAAAASGGEGEGEAGAGAMEPDPPPRAGPRTDRLLALSMVWANHVFLGCRYSKAVMDKVLEMGEGIKVTDAPVHTTRDEVVANKKKKEIPSADEKAKVKPSEKKKAVTDAKTIDFVAMSEKAENVSQEVDPTRIPGLDGFPEIEAPAPLPGPQAETPACPVPAVSSNQKEAQPPPKESEVKKAPAPVTNQQAAPAPAPAPAPRSEPPTPTKNCSSNSAEAKPAAQPDHIVERLVPAAASQKVTPQPAASQSCKPPITIVSLTPEAVKEKQTFYNKLYKAVAWKLVSAGGYSNDINHLAILSNCIQATKGSLESVCIPLKDISELHLPHSAAREGIVCELRCQSVYLATGYGKCKVSAKDMAAKEAVKLFLKQKVTVKMCKRKFKGTDIEDLVLLSEDIHRLNLAPALMNPLEPSAR
SIO_010081: cdkn2aip
subclass of: SO_0000673
so part of: cdkn2aip
location: join(2133842..2134131,2137734..2137864,2139981..2140951)
location: region:2133842-2140951:1
so has part: feature:2133842-2134131:1:exon
so has part: feature:2137734-2137864:1:exon
so has part: feature:2139981-2140951:1:exon

XP_055520625.1
type: Protein
SIO_000068: ncbiprotein

position:2140951:1
position: 2140951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2133842-2134131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2137734-2137864:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2139981-2140951:1:exon

ing2
type: Gene
subclass of: SO_0000704
RO_0002162: 7782
gene: ing2
note: inhibitor of growth family, member 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2157115..2164618
location: region:2157115-2164618:1
so has part: feature:2157115-2164618:1:exon
subclass of: SO_0000010

129714797
type: Gene
SIO_000068: ncbigene

position:2157115:1
position: 2157115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2164618:1
position: 2164618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2157115-2164618:1:exon

ing2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: ing2
product: inhibitor of growth family, member 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_055664643.1
SIO_010081: ing2
subclass of: SO_0000673
so part of: ing2
location: join(2157115..2157286,2163836..2164618)
location: region:2157115-2164618:1
so has part: feature:2157115-2157286:1:exon
so has part: feature:2163836-2164618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2157115-2157286:1:exon

position:2157286:1
position: 2157286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2163836-2164618:1:exon

position:2163836:1
position: 2163836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ing2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: ing2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibitor of growth protein 2
translation: MLGPGHRPRGSGYVEQYLDSVEALPLDLQRSVSRLREIDTRYREVLKELDDAYDKYKQEMDVAQRKRLLQHLQLALINSQELGDEKIQIVTQMSEQVENCAKQMDSHSDCFEEPSEHEKPVEKAKVAEAPQAERPSRRPRRQKNSENRELCHPGNDTEEGDEQPKEKKSKSAKKKRSKARPEREISPIDFPIDPNEPTYCLCNQVSYGEMIGCDNEECPIEWFHFSCVGLTYKPKGKWYCPKCRGDTEKTMDKCIEKSKKDRRSR
SIO_010081: ing2
subclass of: SO_0000673
so part of: ing2
location: join(2157157..2157286,2163836..2164503)
location: region:2157157-2164503:1
so has part: feature:2157157-2157286:1:exon
so has part: feature:2163836-2164503:1:exon

XP_055520618.1
type: Protein
SIO_000068: ncbiprotein

position:2157157:1
position: 2157157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2164503:1
position: 2164503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2157157-2157286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2163836-2164503:1:exon

si:ch211-212k18.6
type: Gene
subclass of: SO_0000704
RO_0002162: 7782
gene: si:ch211-212k18.6
note: uncharacterized si:ch211-212k18.6; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2172720..2211473)
location: region:2172720-2211473:-1
so has part: feature:2172720-2211473:-1:exon
subclass of: SO_0000010

129714798
type: Gene
SIO_000068: ncbigene

position:2172720:-1
position: 2172720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2211473:-1
position: 2211473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2172720-2211473:-1:exon

si:ch211-212k18.6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: si:ch211-212k18.6
product: uncharacterized si:ch211-212k18.6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_055664644.1
SIO_010081: si:ch211-212k18.6
subclass of: SO_0000673
so part of: si:ch211-212k18.6
location: complement(join(2172720..2173315,2178691..2178815,2185779..2185873,2191707..2191913,2196038..2196192,2197154..2197326,2199294..2199424,2202128..2202329,2209803..2211473))
location: region:2172720-2211473:-1
so has part: feature:2209803-2211473:-1:exon
so has part: feature:2202128-2202329:-1:exon
so has part: feature:2199294-2199424:-1:exon
so has part: feature:2197154-2197326:-1:exon
so has part: feature:2196038-2196192:-1:exon
so has part: feature:2191707-2191913:-1:exon
so has part: feature:2185779-2185873:-1:exon
so has part: feature:2178691-2178815:-1:exon
so has part: feature:2172720-2173315:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2209803-2211473:-1:exon

position:2209803:-1
position: 2209803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2202128-2202329:-1:exon

position:2202128:-1
position: 2202128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2202329:-1
position: 2202329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2199294-2199424:-1:exon

position:2199294:-1
position: 2199294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2199424:-1
position: 2199424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2197154-2197326:-1:exon

position:2197154:-1
position: 2197154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2197326:-1
position: 2197326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2196038-2196192:-1:exon

position:2196038:-1
position: 2196038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2196192:-1
position: 2196192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2191707-2191913:-1:exon

position:2191707:-1
position: 2191707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2191913:-1
position: 2191913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2185779-2185873:-1:exon

position:2185779:-1
position: 2185779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2185873:-1
position: 2185873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2178691-2178815:-1:exon

position:2178691:-1
position: 2178691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2178815:-1
position: 2178815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2172720-2173315:-1:exon

position:2173315:-1
position: 2173315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

si:ch211-212k18.6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: si:ch211-212k18.6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein si:ch211-212k18.6
translation: MKSADGIVDINPMKNNSSYVVCRSLNSEVISIWNVRKAKYKGQAVQLERGLVDGTNIALVRDTKLYILSDKGMAIHSETPRPIFQTLLIYDLVKKKYTTKLTDLHIIPCLKHEYRILASEQLLGLSEYRDHLVLWNLKTGFIQERVRPNYKDQFCPLNGLPSHSNYDFYNEHLTTRKRGGDSGGLSEFMTPWEKRTETKTAQRRRLDKEMEREITTLKQFCKEKSNPIDQYLLSGNDKVVVCSYFAHHLAVFNLETETHTHTLEDRASMLFLHCAALTDGGGHLVLPNYNDEDKVSYVTLWDLCTGKVRKRLKNEPNVCCTAITNSADRIVLGIAETNRLKVWDPFRKGHKTIPGYKNLNFGTNNSVHLTDGGSKAIVLAGDVSVWDLDGGNVLSVFTPDSTIATMTLAAQSNLILLTMSNHHVLITLALTPKNKLRLASGGDMFGEASSSSSSEDESKPLDQPHPSGN
SIO_010081: si:ch211-212k18.6
subclass of: SO_0000673
so part of: si:ch211-212k18.6
location: complement(join(2173047..2173315,2178691..2178815,2185779..2185873,2191707..2191913,2196038..2196192,2197154..2197326,2199294..2199424,2202128..2202329,2209803..2209855))
location: region:2173047-2209855:-1
so has part: feature:2209803-2209855:-1:exon
so has part: feature:2202128-2202329:-1:exon
so has part: feature:2199294-2199424:-1:exon
so has part: feature:2197154-2197326:-1:exon
so has part: feature:2196038-2196192:-1:exon
so has part: feature:2191707-2191913:-1:exon
so has part: feature:2185779-2185873:-1:exon
so has part: feature:2178691-2178815:-1:exon
so has part: feature:2173047-2173315:-1:exon

XP_055520619.1
type: Protein
SIO_000068: ncbiprotein

position:2173047:-1
position: 2173047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2209855:-1
position: 2209855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2209803-2209855:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2202128-2202329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2199294-2199424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2197154-2197326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2196038-2196192:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2191707-2191913:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2185779-2185873:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2178691-2178815:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2173047-2173315:-1:exon

LOC129714801
type: Gene
subclass of: SO_0000704
RO_0002162: 7782
gene: LOC129714801
note: NACHT domain- and WD repeat-containing protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2212839..2252464)
location: region:2212839-2252464:-1
so has part: feature:2212839-2252464:-1:exon
subclass of: SO_0000010

129714801
type: Gene
SIO_000068: ncbigene

position:2212839:-1
position: 2212839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2252464:-1
position: 2252464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2212839-2252464:-1:exon

LOC129714801
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7782
gene: LOC129714801
product: NACHT domain- and WD repeat-containing protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_055664647.1
SIO_010081: LOC129714801
subclass of: SO_0000673
so part of: LOC129714801
location: complement(join(2212839..2213253,2214164..2214292,2215354..2215487,2216899..2217230,2219870..2219998,2227809..2227948,2235740..2236632,2245858..2246061,2249648..2249771,2252460..2252464))
location: region:2212839-2252464:-1
so has part: feature:2252460-2252464:-1:exon
so has part: feature:2249648-2249771:-1:exon
so has part: feature:2245858-2246061:-1:exon
so has part: feature:2235740-2236632:-1:exon
so has part: feature:2227809-2227948:-1:exon
so has part: feature:2219870-2219998:-1:exon
so has part: feature:2216899-2217230:-1:exon
so has part: feature:2215354-2215487:-1:exon
so has part: feature:2214164-2214292:-1:exon
so has part: feature:2212839-2213253:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2252460-2252464:-1:exon

position:2252460:-1
position: 2252460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2249648-2249771:-1:exon

position:2249648:-1
position: 2249648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2249771:-1
position: 2249771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2245858-2246061:-1:exon

position:2245858:-1
position: 2245858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2246061:-1
position: 2246061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2235740-2236632:-1:exon

position:2235740:-1
position: 2235740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2236632:-1
position: 2236632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2227809-2227948:-1:exon

position:2227809:-1
position: 2227809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2227948:-1
position: 2227948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2219870-2219998:-1:exon

position:2219870:-1
position: 2219870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2219998:-1
position: 2219998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2216899-2217230:-1:exon

position:2216899:-1
position: 2216899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2217230:-1
position: 2217230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2215354-2215487:-1:exon

position:2215354:-1
position: 2215354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2215487:-1
position: 2215487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2214164-2214292:-1:exon

position:2214164:-1
position: 2214164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2214292:-1
position: 2214292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2212839-2213253:-1:exon

position:2213253:-1
position: 2213253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC129714801
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7782
gene: LOC129714801
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT domain- and WD repeat-containing protein 1
translation: MRELHRVVRFVGVTGESRSLRLLLHGLCIQLAEIYHKSIRFSEEFPGLLNEFTSLLELATEDHPLLISLDGLDELSDDYNARSLFWLPSELPKNVYIIASMTVEEKEAAPKIFNDVGKVLHIPPLTSVETEQILGSWLERDSRTLAADQWALLVGACSACPSPLYLQCAYRESLGWRSSTRAVDIYLPPGLQPLYAAVLSRLEKAHGEALVRRAAGILALSRNGATFAEVSDLLSLDPAVMRELGHVQDASVPKVPVLTWMKLRGDLKLHLVERRSDDTRTFAWAHSALRRACLNRYLPSNDHRSALHLTLANYFSGKPSGLSGRPGTCEPEDLHAQPLAWVRGQGPGAKHTFNLRRLNGVPHHLLKAGQVATLITECLFNFQFLLHKVWALSVVSVEEDLKAALTLERKVGDLTLLYEAIQLSKKVLLQDPCQLASQLVGRLQQIVTEDTPVTPDDPRKYPHLLRLLSECQRSSMPFLVPSFTCLLPPGGLMYSTLSGHTDRITAVTCFQKGLQAITASRDGTLKIWDLISGKALHTVHGVGKDIDSITLCLQNTLAAVTEDNALQVWDIHTGKQIFTVTGSLDHPIVRSALDGQHLLAFYDGSHFVKIFDVSNCCRLLHQVDITPEIDPIHKDHTILVSEYSLRDQVLFAYRSGKEGMVLSSKQGKVVAKLPARDAAASVQGVAVTKDYFLLVCRYPCSRLRQVLHIELFGVKSRAYVRTVSGCCDHRLSFLSVNHSGSHLLALSSSRQTNISTILSWDLETEDHKHLAEFSSAAIGGKWAPSNTHGGAAIELLSCSECSAGDPGSIPTMGAVCTEFVRSPHDL
SIO_010081: LOC129714801
subclass of: SO_0000673
so part of: LOC129714801
location: complement(join(2212863..2213253,2214164..2214292,2215354..2215487,2216899..2217230,2219870..2219998,2227809..2227948,2235740..2236632,2245858..2246061,2249648..2249771,2252460..2252464))
location: region:2212863-2252464:-1
so has part: feature:2252460-2252464:-1:exon
so has part: feature:2249648-2249771:-1:exon
so has part: feature:2245858-2246061:-1:exon
so has part: feature:2235740-2236632:-1:exon
so has part: feature:2227809-2227948:-1:exon
so has part: feature:2219870-2219998:-1:exon
so has part: feature:2216899-2217230:-1:exon
so has part: feature:2215354-2215487:-1:exon
so has part: feature:2214164-2214292:-1:exon
so has part: feature:2212863-2213253:-1:exon

XP_055520622.1
type: Protein
SIO_000068: ncbiprotein

position:2212863:-1
position: 2212863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2252460-2252464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2249648-2249771:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2245858-2246061:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2235740-2236632:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2227809-2227948:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2219870-2219998:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2216899-2217230:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2215354-2215487:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2214164-2214292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2212863-2213253:-1:exon