Petromyzon marinus isolate kPetMar1 chromosome 85, kPetMar1.pri, whole genome shotgun sequence.
type: Entry
definition: Petromyzon marinus isolate kPetMar1 chromosome 85, kPetMar1.pri, whole genome shotgun sequence.
sequence version: NC_046153.1
sequence date: 2020-03-20
sequence: sequence
division: CON
label: NC_046153.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA611764
dblink: SAMN12629506
keyword: WGS
keyword: RefSeq
source: Petromyzon marinus (sea lamprey)
organism: Petromyzon marinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021525.1.\nAssembly name: kPetMar1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/24. The original whole-genome shotgun project has the\naccession JAAIYE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-DEC-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_dups v. github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n scaff10x v. 4.1.0; Bionano Solve DLS v.\n 3.2.1; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. smrtlink_6.0.0.47841;\n longranger align v. 2.2.2; freebayes\n Illumina polishing v. 1.3.1; gEVAL manual\n curation v. 2019-12-09; VGP assembly\n pipeline individual v. 1.6\nAssembly Name :: kPetMar1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 62.36x\nSequencing Technology :: PacBio Sequel I CLR; llumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Petromyzon marinus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 522241
topology: linear
so has quality: SO_0000987
location: 1..522241
location: region:1-522241:1
RO_0002162: 7757

NC_046153
type: RefSeq
SIO_000068: refseq

PRJNA611764
type: BioProject
SIO_000068: bioproject

SAMN12629506
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522241:1
position: 522241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-522241:1:source
so part of: sequence
organism: Petromyzon marinus
mol type: genomic DNA
isolate: kPetMar1
chromosome: 85
sex: male
tissue type: sperm
dev stage: adult
country: USA: Great Lakes Fisheries Commission
lat lon: 42.2821 N 83.74847 W
collection date: 12-Jun-2018
collected by: Jeremiah Smith

7757
type: Taxonomy
SIO_000068: taxonomy

LOC116957748
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957748
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 23258..26432
location: region:23258-26432:1
so has part: feature:23258-26432:1:exon
subclass of: SO_0000010

116957748
type: Gene
SIO_000068: ncbigene

position:23258:1
position: 23258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26432:1
position: 26432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23258-26432:1:exon

LOC116957748
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957748
product: decorin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032980084.1
SIO_010081: LOC116957748
subclass of: SO_0000673
so part of: LOC116957748
location: join(23258..23509,24162..24255,24455..24590,25062..26432)
location: region:23258-26432:1
so has part: feature:23258-23509:1:exon
so has part: feature:24162-24255:1:exon
so has part: feature:24455-24590:1:exon
so has part: feature:25062-26432:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23258-23509:1:exon

position:23509:1
position: 23509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24162-24255:1:exon

position:24162:1
position: 24162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24255:1
position: 24255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:24455-24590:1:exon

position:24455:1
position: 24455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24590:1
position: 24590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:25062-26432:1:exon

position:25062:1
position: 25062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957748
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957748
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: decorin-like
translation: MASGGLSGLRSLAYLRASECNLTAVPQGLPPQLQELYLDSNAIKTVRKDDLKGLTKLTRLGLSDNAVKSVAAGALDLSSLRELHLDHNELSSVPPGFPTLKRLQVIFLHDNKIASIFNDSFCPPVFNPKKALYTSISLFGNALRPWEVPASAFSCVSGRAALHLGNYRK
SIO_010081: LOC116957748
subclass of: SO_0000673
so part of: LOC116957748
location: join(23428..23509,24162..24255,24455..24590,25062..25259)
location: region:23428-25259:1
so has part: feature:23428-23509:1:exon
so has part: feature:24162-24255:1:exon
so has part: feature:24455-24590:1:exon
so has part: feature:25062-25259:1:exon

XP_032835975.1
type: Protein
SIO_000068: ncbiprotein

position:23428:1
position: 23428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25259:1
position: 25259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23428-23509:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24162-24255:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24455-24590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:25062-25259:1:exon

LOC116957741
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957741
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 154446..178576
location: region:154446-178576:1
so has part: feature:154446-178576:1:exon
subclass of: SO_0000010

116957741
type: Gene
SIO_000068: ncbigene

position:154446:1
position: 154446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178576:1
position: 178576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154446-178576:1:exon

LOC116957741
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957741
product: zinc finger protein 271-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 128 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_032980068.1
SIO_010081: LOC116957741
subclass of: SO_0000673
so part of: LOC116957741
location: join(154446..154500,174334..178576)
location: region:154446-178576:1
so has part: feature:154446-154500:1:exon
so has part: feature:174334-178576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:154446-154500:1:exon

position:154500:1
position: 154500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:174334-178576:1:exon

position:174334:1
position: 174334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957741
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957741
product: zinc finger protein 271-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 128 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_032980067.1
SIO_010081: LOC116957741
subclass of: SO_0000673
so part of: LOC116957741
location: join(169147..169222,174334..178576)
location: region:169147-178576:1
so has part: feature:169147-169222:1:exon
so has part: feature:174334-178576:1:exon

position:169147:1
position: 169147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169147-169222:1:exon

position:169222:1
position: 169222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:174334-178576:1:exon

LOC116957741
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957741
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 271-like
translation: MTRSSDSRQAGARRHECEQCPYDMSHTGHMNLHQKSQIAKKHFKCTTCEKAFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKAFRRSSHLNIHQRTHTDEKPFQCTTCEKAFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSAELQSHQRIHTDEKHFKCTVCEKAFRRSSHLNIHQTTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSAELQSHQRIHTDEKHFKCTVCEKAFRRSSHLNIHQTTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKAFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSQLKTHQRTHTGEKPFKCTVCGKGFADSRNVLQHQRTHSCDKPFKCTLCEKAFKRSSQLQIHQKTHTGEKPFKCTVCGKAFTQSGCLAIHQRQHTGEKPFSCTVCGKAFTRSVFLNVHQIQHTGEKPFKCTMCGKAFTHSRSLNIHQRKHTGEKPFKCTVCGKAFTQSRCLNIHQRTHTGEKPFNCTVCGKAFTQSRSRNVHQRKHTGEKPFKCTVCGKAFTQSGSRNVHQRKHTGKKPFKWTVCGKAHARSDDQNRHEKIYVETEVESRSESAALGPSSMQQEAEDDPSLATWPAVKVERKEVKMECEEVKVDCAEVMVDYKEVKVECEEVKVKNQDDSSQGPDLQVDGASVKHEANSDSEGGPGDPQEFVDVEVWVEFLGV
SIO_010081: LOC116957741
subclass of: SO_0000673
so part of: LOC116957741
location: 174339..177251
location: region:174339-177251:1
so has part: feature:174339-177251:1:exon

XP_032835958.1
type: Protein
SIO_000068: ncbiprotein

position:174339:1
position: 174339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177251:1
position: 177251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174339-177251:1:exon

LOC116957741
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957741
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 271-like
translation: MTRSSDSRQAGARRHECEQCPYDMSHTGHMNLHQKSQIAKKHFKCTTCEKAFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKAFRRSSHLNIHQRTHTDEKPFQCTTCEKAFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSAELQSHQRIHTDEKHFKCTVCEKAFRRSSHLNIHQTTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSAELQSHQRIHTDEKHFKCTVCEKAFRRSSHLNIHQTTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKAFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSQLKTHQRTHTGEKPFKCTVCGKGFADSRNVLQHQRTHSCDKPFKCTLCEKAFKRSSQLQIHQKTHTGEKPFKCTVCGKAFTQSGCLAIHQRQHTGEKPFSCTVCGKAFTRSVFLNVHQIQHTGEKPFKCTMCGKAFTHSRSLNIHQRKHTGEKPFKCTVCGKAFTQSRCLNIHQRTHTGEKPFNCTVCGKAFTQSRSRNVHQRKHTGEKPFKCTVCGKAFTQSGSRNVHQRKHTGKKPFKWTVCGKAHARSDDQNRHEKIYVETEVESRSESAALGPSSMQQEAEDDPSLATWPAVKVERKEVKMECEEVKVDCAEVMVDYKEVKVECEEVKVKNQDDSSQGPDLQVDGASVKHEANSDSEGGPGDPQEFVDVEVWVEFLGV
SIO_010081: LOC116957741
subclass of: SO_0000673
so part of: LOC116957741
location: 174339..177251
location: region:174339-177251:1
so has part: feature:174339-177251:1:exon

XP_032835959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174339-177251:1:exon

LOC116957743
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957743
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(198558..220286)
location: region:198558-220286:-1
so has part: feature:198558-220286:-1:exon
subclass of: SO_0000010

116957743
type: Gene
SIO_000068: ncbigene

position:198558:-1
position: 198558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220286:-1
position: 220286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198558-220286:-1:exon

LOC116957743
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957743
product: zinc finger protein 239-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032980077.1
SIO_010081: LOC116957743
subclass of: SO_0000673
so part of: LOC116957743
location: complement(join(198558..199691,219234..220286))
location: region:198558-220286:-1
so has part: feature:219234-220286:-1:exon
so has part: feature:198558-199691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219234-220286:-1:exon

position:219234:-1
position: 219234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:198558-199691:-1:exon

position:199691:-1
position: 199691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957743
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957743
product: zinc finger protein 239-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_032980076.1
SIO_010081: LOC116957743
subclass of: SO_0000673
so part of: LOC116957743
location: complement(join(198566..199828,202142..202203))
location: region:198566-202203:-1
so has part: feature:202142-202203:-1:exon
so has part: feature:198566-199828:-1:exon

position:198566:-1
position: 198566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202203:-1
position: 202203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202142-202203:-1:exon

position:202142:-1
position: 202142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:198566-199828:-1:exon

position:199828:-1
position: 199828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957743
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957743
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oocyte zinc finger protein XlCOF6-like isoform X2
translation: MSHTGHIHLYHKSHMAKKAFKCTVCEKVFRRSSQLRTHQRQHTGEKPFECTVCGKAFTRSATRHVHQKTHTGEKPFKCTVCGKAFAGSGNFLQHQRTHSGDKPFKCTLCEKAFKQSSHLQIHQRTHTGEKPFKCTVCGKAFTRSGSLNIHQRTHTGEKPFKCTVCGKAFTQSAYLNIHQRTHTGEKPFKCTVCGKAFAGSANFSQHQRTHSGDKPFKCTLCEKAFRQSSQLQIHQITHTGEKPFKCTVCGKAFTRSAYLTIHQRTHTGEKPLKCTVCGKAFTKSKYLKYHHQRQHTGEKPFKCTCTVCEKVFRRSSQLRTHQRQHTGEKPFECTVCGKAFTRSATRHVHQRTHTGEKPFKCTVCGKAFARSAYLNIHQRTHSSDKPFKCTLCEKTFKRSSHLQIHQITHTGANPFKCTVCGKAFTRSASLNIHQRTHTGEKPFKCTVCGKAFIQSAYLNIHQRTHTGEKPFKCTVCGKAFTRSGSLNSHQRKHTGEKPFKCTVCGKAFTQSRYLKNHHQRRHTGEKPFKCTVCGKLFAQSVDRNWHEKIHVEEVESSPSRMQQDPKDNPSLATWPSVKVEREEVKGECEEVKVKCEKVKMECEEVKVKCEDEDSTPGPDLEVDGGSVKQEQLSDSEGGRGDPHEVVDVEVWVEFLGEGSCSG
SIO_010081: LOC116957743
subclass of: SO_0000673
so part of: LOC116957743
location: complement(join(198615..199691,219234..220145))
location: region:198615-220145:-1
so has part: feature:219234-220145:-1:exon
so has part: feature:198615-199691:-1:exon

XP_032835968.1
type: Protein
SIO_000068: ncbiprotein

position:198615:-1
position: 198615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220145:-1
position: 220145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219234-220145:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198615-199691:-1:exon

LOC116957743
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957743
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like isoform X1
translation: MSHTGHINLYHKSHMAMKAFKCTVCEKVFRRSSQLRTHQRQHTGEKPFECTVCGKAFTRSATRHVHQRTHTGEKPFKCTVCGKAFARSAYLNIHQRTHSSDKPFKCTLCEKTFKRSSHLQIHQITHTGANPFKCTVCGKAFTRSASLNIHQRTHTGEKPFKCTVCGKAFIQSAYLNIHQRTHTGEKPFKCTVCGKAFTRSGSLNSHQRKHTGEKPFKCTVCGKAFTQSRYLKNHHQRRHTGEKPFKCTVCGKLFAQSVDRNWHEKIHVEEVESSPSRMQQDPKDNPSLATWPSVKVEREEVKGECEEVKVKCEKVKMECEEVKVKCEDEDSTPGPDLEVDGGSVKQEQLSDSEGGRGDPHEVVDVEVWVEFLGEGSCSG
SIO_010081: LOC116957743
subclass of: SO_0000673
so part of: LOC116957743
location: complement(198615..199754)
location: region:198615-199754:-1
so has part: feature:198615-199754:-1:exon

XP_032835967.1
type: Protein
SIO_000068: ncbiprotein

position:199754:-1
position: 199754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198615-199754:-1:exon

LOC116957742
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 209013..295509
location: region:209013-295509:1
so has part: feature:209013-295509:1:exon
subclass of: SO_0000010

116957742
type: Gene
SIO_000068: ncbigene

position:209013:1
position: 209013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295509:1
position: 295509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209013-295509:1:exon

LOC116957742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957742
product: oocyte zinc finger protein XlCOF6-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_032980069.1
SIO_010081: LOC116957742
subclass of: SO_0000673
so part of: LOC116957742
location: join(209013..209051,291213..295509)
location: region:209013-295509:1
so has part: feature:209013-209051:1:exon
so has part: feature:291213-295509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:209013-209051:1:exon

position:209051:1
position: 209051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:291213-295509:1:exon

position:291213:1
position: 291213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957742
product: oocyte zinc finger protein XlCOF6-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032980074.1
SIO_010081: LOC116957742
subclass of: SO_0000673
so part of: LOC116957742
location: join(209013..209051,291213..291367,291620..295509)
location: region:209013-295509:1
so has part: feature:209013-209051:1:exon
so has part: feature:291213-291367:1:exon
so has part: feature:291620-295509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:209013-209051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:291213-291367:1:exon

position:291367:1
position: 291367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:291620-295509:1:exon

position:291620:1
position: 291620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957742
product: oocyte zinc finger protein XlCOF6-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032980073.1
SIO_010081: LOC116957742
subclass of: SO_0000673
so part of: LOC116957742
location: join(209013..209051,291213..291348,291433..295509)
location: region:209013-295509:1
so has part: feature:209013-209051:1:exon
so has part: feature:291213-291348:1:exon
so has part: feature:291433-295509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:209013-209051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:291213-291348:1:exon

position:291348:1
position: 291348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:291433-295509:1:exon

position:291433:1
position: 291433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957742
product: oocyte zinc finger protein XlCOF6-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_032980071.1
SIO_010081: LOC116957742
subclass of: SO_0000673
so part of: LOC116957742
location: join(274473..274514,291213..295509)
location: region:274473-295509:1
so has part: feature:274473-274514:1:exon
so has part: feature:291213-295509:1:exon

position:274473:1
position: 274473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274473-274514:1:exon

position:274514:1
position: 274514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:291213-295509:1:exon

LOC116957744
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957744
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 274630..277583
location: region:274630-277583:1
so has part: feature:274630-277583:1:exon
subclass of: SO_0000010

116957744
type: Gene
SIO_000068: ncbigene

position:274630:1
position: 274630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277583:1
position: 277583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274630-277583:1:exon

LOC116957744
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957744
product: zinc finger protein 239-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_032980078.1
SIO_010081: LOC116957744
subclass of: SO_0000673
so part of: LOC116957744
location: join(274630..274821,276412..277583)
location: region:274630-277583:1
so has part: feature:274630-274821:1:exon
so has part: feature:276412-277583:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:274630-274821:1:exon

position:274821:1
position: 274821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:276412-277583:1:exon

position:276412:1
position: 276412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957744
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957744
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MSHTGHINLYHKSHMAKKAFKCTVCEKVFRRSSQLRTHQRQHTGEKPFECTVCGKAFTRSASRHAHQKTHTGEKPFKCTVCGKAFAGSGNFMTHQKTHSSDKPFKCTLCEKTFKRSSHLQIHQITHTGANPFKCTVCGKAFTRSGSLNIHQRTHTGEKPFKCTVCGKAFTRSGSLNSHQRKHTGEKPFKCTVCGKAFTQSRYLKNHHQRRHTGEKPFKCTVCGKLFARSVDRNWHEKIHAEEVESIPSRMQQDPKDNPSLATWPAVKVQREEVKGECEEVKVKCEKVKMECEEVKCEDEDSTPGPDLQVDGGSIKQEQLSDSEGGPGDPHEVVDVEVWVEFLGEGSCSG
SIO_010081: LOC116957744
subclass of: SO_0000673
so part of: LOC116957744
location: 276486..277535
location: region:276486-277535:1
so has part: feature:276486-277535:1:exon

XP_032835969.1
type: Protein
SIO_000068: ncbiprotein

position:276486:1
position: 276486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277535:1
position: 277535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276486-277535:1:exon

LOC116957742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957742
product: oocyte zinc finger protein XlCOF6-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_032980070.1
SIO_010081: LOC116957742
subclass of: SO_0000673
so part of: LOC116957742
location: join(285890..285954,291213..295509)
location: region:285890-295509:1
so has part: feature:285890-285954:1:exon
so has part: feature:291213-295509:1:exon

position:285890:1
position: 285890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285890-285954:1:exon

position:285954:1
position: 285954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:291213-295509:1:exon

LOC116957742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957742
product: oocyte zinc finger protein XlCOF6-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032980072.1
SIO_010081: LOC116957742
subclass of: SO_0000673
so part of: LOC116957742
location: join(289208..289415,291213..295509)
location: region:289208-295509:1
so has part: feature:289208-289415:1:exon
so has part: feature:291213-295509:1:exon

position:289208:1
position: 289208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289208-289415:1:exon

position:289415:1
position: 289415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:291213-295509:1:exon

LOC116957742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oocyte zinc finger protein XlCOF6-like isoform X1
translation: MSHTGHMNLHQKSQMAKEHFKCTVCEKAFRRSSHLNIHQRIHTDEKPFKCTTCEKAFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSAELQSHQRIHTDEKHFKCTVCEKAFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSAELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFLCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTGEKPFKCTVCGKGFADSRNVLQHQRTHSCDKPFKCTLCEKAFKRSSQLQIHQKTHTGEKPFKCTVCGKAFTRSGSLKHHQRTHTGEKPFKCTVCGKAFIQSGCLAIHQRQHTGEKPFSCTVCGKAFTRSVFLNVHQIQHTGEKPFKCTMCGKAFTHSRSLNVHQRKHTGKKPFKWTVCGKAHARSDDQNRHEKIYVETEVESRSESAALGPSCMQQEAEDDPSLATWPAVKVERKEVKMECEEVKVDCAEAMVDYKEVKVECEEVKVKNQVDSSQGPDLQVDGASVKHEANSDSEGGPGDPQEFVDVEVWVEFLGV
SIO_010081: LOC116957742
subclass of: SO_0000673
so part of: LOC116957742
location: 291287..293122
location: region:291287-293122:1
so has part: feature:291287-293122:1:exon

XP_032835960.1
type: Protein
SIO_000068: ncbiprotein

position:291287:1
position: 291287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293122:1
position: 293122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291287-293122:1:exon

LOC116957742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oocyte zinc finger protein XlCOF6-like isoform X1
translation: MSHTGHMNLHQKSQMAKEHFKCTVCEKAFRRSSHLNIHQRIHTDEKPFKCTTCEKAFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSAELQSHQRIHTDEKHFKCTVCEKAFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSAELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFLCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTGEKPFKCTVCGKGFADSRNVLQHQRTHSCDKPFKCTLCEKAFKRSSQLQIHQKTHTGEKPFKCTVCGKAFTRSGSLKHHQRTHTGEKPFKCTVCGKAFIQSGCLAIHQRQHTGEKPFSCTVCGKAFTRSVFLNVHQIQHTGEKPFKCTMCGKAFTHSRSLNVHQRKHTGKKPFKWTVCGKAHARSDDQNRHEKIYVETEVESRSESAALGPSCMQQEAEDDPSLATWPAVKVERKEVKMECEEVKVDCAEAMVDYKEVKVECEEVKVKNQVDSSQGPDLQVDGASVKHEANSDSEGGPGDPQEFVDVEVWVEFLGV
SIO_010081: LOC116957742
subclass of: SO_0000673
so part of: LOC116957742
location: 291287..293122
location: region:291287-293122:1
so has part: feature:291287-293122:1:exon

XP_032835961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291287-293122:1:exon

LOC116957742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oocyte zinc finger protein XlCOF6-like isoform X1
translation: MSHTGHMNLHQKSQMAKEHFKCTVCEKAFRRSSHLNIHQRIHTDEKPFKCTTCEKAFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSAELQSHQRIHTDEKHFKCTVCEKAFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSAELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFLCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTGEKPFKCTVCGKGFADSRNVLQHQRTHSCDKPFKCTLCEKAFKRSSQLQIHQKTHTGEKPFKCTVCGKAFTRSGSLKHHQRTHTGEKPFKCTVCGKAFIQSGCLAIHQRQHTGEKPFSCTVCGKAFTRSVFLNVHQIQHTGEKPFKCTMCGKAFTHSRSLNVHQRKHTGKKPFKWTVCGKAHARSDDQNRHEKIYVETEVESRSESAALGPSCMQQEAEDDPSLATWPAVKVERKEVKMECEEVKVDCAEAMVDYKEVKVECEEVKVKNQVDSSQGPDLQVDGASVKHEANSDSEGGPGDPQEFVDVEVWVEFLGV
SIO_010081: LOC116957742
subclass of: SO_0000673
so part of: LOC116957742
location: 291287..293122
location: region:291287-293122:1
so has part: feature:291287-293122:1:exon

XP_032835962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291287-293122:1:exon

LOC116957742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oocyte zinc finger protein XlCOF6-like isoform X1
translation: MSHTGHMNLHQKSQMAKEHFKCTVCEKAFRRSSHLNIHQRIHTDEKPFKCTTCEKAFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSAELQSHQRIHTDEKHFKCTVCEKAFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSAELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFLCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTGEKPFKCTVCGKGFADSRNVLQHQRTHSCDKPFKCTLCEKAFKRSSQLQIHQKTHTGEKPFKCTVCGKAFTRSGSLKHHQRTHTGEKPFKCTVCGKAFIQSGCLAIHQRQHTGEKPFSCTVCGKAFTRSVFLNVHQIQHTGEKPFKCTMCGKAFTHSRSLNVHQRKHTGKKPFKWTVCGKAHARSDDQNRHEKIYVETEVESRSESAALGPSCMQQEAEDDPSLATWPAVKVERKEVKMECEEVKVDCAEAMVDYKEVKVECEEVKVKNQVDSSQGPDLQVDGASVKHEANSDSEGGPGDPQEFVDVEVWVEFLGV
SIO_010081: LOC116957742
subclass of: SO_0000673
so part of: LOC116957742
location: 291287..293122
location: region:291287-293122:1
so has part: feature:291287-293122:1:exon

XP_032835963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291287-293122:1:exon

LOC116957742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 2 homolog isoform X3
translation: MSHTGHMNLHQKSQMAKEHFKCTVCEKAFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSAELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFLCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTGEKPFKCTVCGKGFADSRNVLQHQRTHSCDKPFKCTLCEKAFKRSSQLQIHQKTHTGEKPFKCTVCGKAFTRSGSLKHHQRTHTGEKPFKCTVCGKAFIQSGCLAIHQRQHTGEKPFSCTVCGKAFTRSVFLNVHQIQHTGEKPFKCTMCGKAFTHSRSLNVHQRKHTGKKPFKWTVCGKAHARSDDQNRHEKIYVETEVESRSESAALGPSCMQQEAEDDPSLATWPAVKVERKEVKMECEEVKVDCAEAMVDYKEVKVECEEVKVKNQVDSSQGPDLQVDGASVKHEANSDSEGGPGDPQEFVDVEVWVEFLGV
SIO_010081: LOC116957742
subclass of: SO_0000673
so part of: LOC116957742
location: join(291287..291367,291620..293122)
location: region:291287-293122:1
so has part: feature:291287-291367:1:exon
so has part: feature:291620-293122:1:exon

XP_032835965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291287-291367:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:291620-293122:1:exon

LOC116957742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oocyte zinc finger protein XlCOF6-like isoform X2
translation: MSHTGHMNLHQKSQMAKEHFKCTTCEKAFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSAELQSHQRIHTDEKHFKCTVCEKAFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFQCTMCEKAFRQSAELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTDEKPFLCTMCEKAFRQSSELQSHQRIHTDEKPFKCTTCEKGFRRSSHLNIHQRTHTGEKPFKCTVCGKGFADSRNVLQHQRTHSCDKPFKCTLCEKAFKRSSQLQIHQKTHTGEKPFKCTVCGKAFTRSGSLKHHQRTHTGEKPFKCTVCGKAFIQSGCLAIHQRQHTGEKPFSCTVCGKAFTRSVFLNVHQIQHTGEKPFKCTMCGKAFTHSRSLNVHQRKHTGKKPFKWTVCGKAHARSDDQNRHEKIYVETEVESRSESAALGPSCMQQEAEDDPSLATWPAVKVERKEVKMECEEVKVDCAEAMVDYKEVKVECEEVKVKNQVDSSQGPDLQVDGASVKHEANSDSEGGPGDPQEFVDVEVWVEFLGV
SIO_010081: LOC116957742
subclass of: SO_0000673
so part of: LOC116957742
location: join(291287..291348,291433..293122)
location: region:291287-293122:1
so has part: feature:291287-291348:1:exon
so has part: feature:291433-293122:1:exon

XP_032835964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291287-291348:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:291433-293122:1:exon

LOC116957746
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957746
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(317530..337449)
location: region:317530-337449:-1
so has part: feature:317530-337449:-1:exon
subclass of: SO_0000010

116957746
type: Gene
SIO_000068: ncbigene

position:317530:-1
position: 317530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337449:-1
position: 337449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317530-337449:-1:exon

LOC116957746
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957746
product: zinc finger protein 91-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032980081.1
SIO_010081: LOC116957746
subclass of: SO_0000673
so part of: LOC116957746
location: complement(join(317530..318783,321426..321477,334114..335830,337388..337449))
location: region:317530-337449:-1
so has part: feature:337388-337449:-1:exon
so has part: feature:334114-335830:-1:exon
so has part: feature:321426-321477:-1:exon
so has part: feature:317530-318783:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:337388-337449:-1:exon

position:337388:-1
position: 337388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:334114-335830:-1:exon

position:334114:-1
position: 334114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335830:-1
position: 335830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:321426-321477:-1:exon

position:321426:-1
position: 321426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321477:-1
position: 321477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:317530-318783:-1:exon

position:318783:-1
position: 318783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957746
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957746
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 91-like
translation: MSHTGHIHLYHKSHMAKKAFKCTVCEKVFRRSSQLRTHQRQHTGEKPFKCTVCGKAFTRSASRHAHQKTHTVEKPFKCTVCGKAFAGSGIFLQHQRTHSGDKPFKCTLCEKEFRHSSQLKIHQRTHTGEKPFKCTVCGKAFTRSAYLNIHQRTHSSDKPFKCTLCEKAFRQSSQLQIHQRTHTGASPFKCTVCGKAFTRSASLNIHQRTHTGEKPFKCTVCGKAFTQSAYLNMHQRTHTGEKPFKCTLCGKAFTQSAYLKIHQRTHTGEKPFKCTVCGKAFTRSESLNNHQRKHTGEKPFKCTVCGKAFAGSANFSQHQRTHASDKPFKCTLCEKAFKQSSQLQIHQITHTGEKPFKCTVCGKAFTRSAYLTIHQRKHTGEKPFKCTVCGKAFTQSRYIKNHHQRQHTGEKPFKCTVCGKLFARSDDLNWHEKIHVEEVESSPSRMQQDPKDNPSLATWPAVKVEREDVKGECEEVKVDREKVKMECEEVKVKSEDEDSTPGPDLQVDGGSVKQEQLSDSEGGPGDPHEVVDVEVWVEFLGEGSCSGYHCLPKQLLLSYIQEAKRSRDSRQPSARRNQCEQCPYDMSHTGHINLYHKLHMAMKAFKCTVCEKVFRRSSQLRTHQRQHTGEKPFECTVCGKAFTRSATRHVHQRTHTGEKPFKCTVCGKAFARSAYLNIHQRTHSSDKPFKCTLCEKTFKRSSHLQIHQITHTGANPFKCTVCGKAFTRSASLNIHQRTHTGEKPFKCTVCGKAFIQSAYLNIHQRTHTGEKPFKCTVCGKAFTRSGSLNSHQRKHTGEKPFKCTVCGKAFTQSRYLKNHHQRRHTGEKPFKCTVCGKLFAQSVDRNWHEKIHVEEVESSPSRMQQDPKDNPSLATWPSVKVEREEVKGECEEVKVKCEKVKMECEEVKVKCEDEDSTPGPDLQVDGGSVKQEQLSDSEGGPGDPHEVVDVEVWVEFLGEGSCSG
SIO_010081: LOC116957746
subclass of: SO_0000673
so part of: LOC116957746
location: complement(join(317584..318783,321426..321477,334114..335756))
location: region:317584-335756:-1
so has part: feature:334114-335756:-1:exon
so has part: feature:321426-321477:-1:exon
so has part: feature:317584-318783:-1:exon

XP_032835972.1
type: Protein
SIO_000068: ncbiprotein

position:317584:-1
position: 317584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335756:-1
position: 335756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334114-335756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321426-321477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317584-318783:-1:exon

LOC116957747
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957747
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(346866..368467)
location: region:346866-368467:-1
so has part: feature:346866-368467:-1:exon
subclass of: SO_0000010

116957747
type: Gene
SIO_000068: ncbigene

position:346866:-1
position: 346866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368467:-1
position: 368467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346866-368467:-1:exon

LOC116957747
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957747
product: tripartite motif-containing protein 14-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032980083.1
SIO_010081: LOC116957747
subclass of: SO_0000673
so part of: LOC116957747
location: complement(join(346866..347451,350871..351091,351236..351258,353378..353611,354586..354681,367489..368467))
location: region:346866-368467:-1
so has part: feature:367489-368467:-1:exon
so has part: feature:354586-354681:-1:exon
so has part: feature:353378-353611:-1:exon
so has part: feature:351236-351258:-1:exon
so has part: feature:350871-351091:-1:exon
so has part: feature:346866-347451:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367489-368467:-1:exon

position:367489:-1
position: 367489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:354586-354681:-1:exon

position:354586:-1
position: 354586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354681:-1
position: 354681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:353378-353611:-1:exon

position:353378:-1
position: 353378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353611:-1
position: 353611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:351236-351258:-1:exon

position:351236:-1
position: 351236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351258:-1
position: 351258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:350871-351091:-1:exon

position:350871:-1
position: 350871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351091:-1
position: 351091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:346866-347451:-1:exon

position:347451:-1
position: 347451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957747
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957747
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 14-like
translation: MTQRGGFHSDLTLRRGRGSSLMRRLLFLDSLKSPSGRAAAQLLRSAAMDSPAPEEDFSCSICLELFKVPLSLSCGHSFCKSCIESHWAVQSEETGFSCPECRRVYYRKPELSKNVFIANMMEILTEIPISPRAGTNSPRAGINSPRAGINSPRAGINSPRGGRRCEPHGQGLELYCRTDAQLICPGCTSCHRRHDIVPVQTEQEDKSEELSSMKLRLSKREGSEISFVNDLVDSTKTVEAAAEQIKWRLSSSYDKLLYLVSEDKASALRAVDKERDLKLSGIRQEIEKSRATLGSLREALSRIRGLEETEDPVEFLEGCTLHWESFASLECEQMEPTGPSTLLEFETTAALQEQIDERLLSFRTSALTNPPQPKPTTPRGRLPAVARHGLDRAKLISRYGCSPTFDTNSAHNLLQISPDLRMVAVTRDSQRHPNHPLRFEFCPQVLCCESFSSGQHYWEVDLGNKSQWCWVGAAYGTIPRKGDNAACTLGMGDESWCLKKDGTRFSVSHGGVEIPVEVREPLRRVGVLLHWEEGLLEFYRADSMQSLHAIHYRFTLPLHPALGVGGDSMRIIDLSCES
SIO_010081: LOC116957747
subclass of: SO_0000673
so part of: LOC116957747
location: complement(join(346910..347451,350871..351091,351236..351258,353378..353611,354586..354681,367489..368109))
location: region:346910-368109:-1
so has part: feature:367489-368109:-1:exon
so has part: feature:354586-354681:-1:exon
so has part: feature:353378-353611:-1:exon
so has part: feature:351236-351258:-1:exon
so has part: feature:350871-351091:-1:exon
so has part: feature:346910-347451:-1:exon

XP_032835974.1
type: Protein
SIO_000068: ncbiprotein

position:346910:-1
position: 346910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368109:-1
position: 368109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367489-368109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354586-354681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:353378-353611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:351236-351258:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350871-351091:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:346910-347451:-1:exon

LOC116957745
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957745
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 386908..411496
location: region:386908-411496:1
so has part: feature:386908-411496:1:exon
subclass of: SO_0000010

116957745
type: Gene
SIO_000068: ncbigene

position:386908:1
position: 386908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411496:1
position: 411496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386908-411496:1:exon

LOC116957745
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957745
product: phosphatidylcholine:ceramide cholinephosphotransferase 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_032980079.1
SIO_010081: LOC116957745
subclass of: SO_0000673
so part of: LOC116957745
location: join(386908..387077,388946..389010,389481..389787,395276..395409,400781..400898,402709..402862,404906..405072,411262..411496)
location: region:386908-411496:1
so has part: feature:386908-387077:1:exon
so has part: feature:388946-389010:1:exon
so has part: feature:389481-389787:1:exon
so has part: feature:395276-395409:1:exon
so has part: feature:400781-400898:1:exon
so has part: feature:402709-402862:1:exon
so has part: feature:404906-405072:1:exon
so has part: feature:411262-411496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:386908-387077:1:exon

position:387077:1
position: 387077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:388946-389010:1:exon

position:388946:1
position: 388946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389010:1
position: 389010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:389481-389787:1:exon

position:389481:1
position: 389481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389787:1
position: 389787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:395276-395409:1:exon

position:395276:1
position: 395276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395409:1
position: 395409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:400781-400898:1:exon

position:400781:1
position: 400781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400898:1
position: 400898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:402709-402862:1:exon

position:402709:1
position: 402709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402862:1
position: 402862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:404906-405072:1:exon

position:404906:1
position: 404906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405072:1
position: 405072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:411262-411496:1:exon

position:411262:1
position: 411262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957745
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957745
product: phosphatidylcholine:ceramide cholinephosphotransferase 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032980080.1
SIO_010081: LOC116957745
subclass of: SO_0000673
so part of: LOC116957745
location: join(387102..387357,388946..389010,389481..389787,395276..395409,400781..400898,402709..402862,404906..405072,411262..411496)
location: region:387102-411496:1
so has part: feature:387102-387357:1:exon
so has part: feature:388946-389010:1:exon
so has part: feature:389481-389787:1:exon
so has part: feature:395276-395409:1:exon
so has part: feature:400781-400898:1:exon
so has part: feature:402709-402862:1:exon
so has part: feature:404906-405072:1:exon
so has part: feature:411262-411496:1:exon

position:387102:1
position: 387102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387102-387357:1:exon

position:387357:1
position: 387357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:388946-389010:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389481-389787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:395276-395409:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:400781-400898:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:402709-402862:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:404906-405072:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:411262-411496:1:exon

LOC116957745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957745
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1-like
translation: MDGHRNGMKGGGRGEHGVRSSRVSADFVADLSLPSPSPCDPAALHHGAPGGPPPSPPPAPGGPPLLLPLSVVGGAGGGGGPPAGSTLPPEWRKTAAAFVYAVSALVATSVAIAVVHERVPDMEVSPPLPDVFFDRVDRVKWAFSVCEINGVILVSMWFIQWACLTHRSIIGRRYFFIIGTLYLYRCVTMYITTLPVPGRHFHCSPKVLGDVELQMRRVMKLIAGGGLSLTGAHTLCGDYLYSGHTVVLTLTCLFAQEYSPRRWLWYRVLCFLLAASGIVAILAAHDHYSIDVLAAYYVTTRLHYTYHSMASTTDLKSRGSGNWFRKLWWFRIFLILEGNVSTSVPLRFSLPMLNAGRRGRYTRVEMA
SIO_010081: LOC116957745
subclass of: SO_0000673
so part of: LOC116957745
location: join(388952..389010,389481..389787,395276..395409,400781..400898,402709..402862,404906..405072,411262..411426)
location: region:388952-411426:1
so has part: feature:388952-389010:1:exon
so has part: feature:389481-389787:1:exon
so has part: feature:395276-395409:1:exon
so has part: feature:400781-400898:1:exon
so has part: feature:402709-402862:1:exon
so has part: feature:404906-405072:1:exon
so has part: feature:411262-411426:1:exon

XP_032835970.1
type: Protein
SIO_000068: ncbiprotein

position:388952:1
position: 388952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411426:1
position: 411426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388952-389010:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:389481-389787:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395276-395409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:400781-400898:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:402709-402862:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404906-405072:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:411262-411426:1:exon

LOC116957745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957745
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylcholine:ceramide cholinephosphotransferase 1-like
translation: MDGHRNGMKGGGRGEHGVRSSRVSADFVADLSLPSPSPCDPAALHHGAPGGPPPSPPPAPGGPPLLLPLSVVGGAGGGGGPPAGSTLPPEWRKTAAAFVYAVSALVATSVAIAVVHERVPDMEVSPPLPDVFFDRVDRVKWAFSVCEINGVILVSMWFIQWACLTHRSIIGRRYFFIIGTLYLYRCVTMYITTLPVPGRHFHCSPKVLGDVELQMRRVMKLIAGGGLSLTGAHTLCGDYLYSGHTVVLTLTCLFAQEYSPRRWLWYRVLCFLLAASGIVAILAAHDHYSIDVLAAYYVTTRLHYTYHSMASTTDLKSRGSGNWFRKLWWFRIFLILEGNVSTSVPLRFSLPMLNAGRRGRYTRVEMA
SIO_010081: LOC116957745
subclass of: SO_0000673
so part of: LOC116957745
location: join(388952..389010,389481..389787,395276..395409,400781..400898,402709..402862,404906..405072,411262..411426)
location: region:388952-411426:1
so has part: feature:388952-389010:1:exon
so has part: feature:389481-389787:1:exon
so has part: feature:395276-395409:1:exon
so has part: feature:400781-400898:1:exon
so has part: feature:402709-402862:1:exon
so has part: feature:404906-405072:1:exon
so has part: feature:411262-411426:1:exon

XP_032835971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388952-389010:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:389481-389787:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395276-395409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:400781-400898:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:402709-402862:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404906-405072:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:411262-411426:1:exon

LOC116957749
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957749
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(441300..465535)
location: region:441300-465535:-1
so has part: feature:441300-465535:-1:exon
subclass of: SO_0000010

116957749
type: Gene
SIO_000068: ncbigene

position:441300:-1
position: 441300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465535:-1
position: 465535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441300-465535:-1:exon

LOC116957749
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957749
product: zinc finger protein OZF-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032980085.1
SIO_010081: LOC116957749
subclass of: SO_0000673
so part of: LOC116957749
location: complement(join(441300..442831,460087..460273))
location: region:441300-460273:-1
so has part: feature:460087-460273:-1:exon
so has part: feature:441300-442831:-1:exon

position:460273:-1
position: 460273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460087-460273:-1:exon

position:460087:-1
position: 460087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:441300-442831:-1:exon

position:442831:-1
position: 442831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957749
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957749
product: zinc finger protein OZF-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032980088.1
SIO_010081: LOC116957749
subclass of: SO_0000673
so part of: LOC116957749
location: complement(join(441300..442831,460042..460095))
location: region:441300-460095:-1
so has part: feature:460042-460095:-1:exon
so has part: feature:441300-442831:-1:exon

position:460095:-1
position: 460095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460042-460095:-1:exon

position:460042:-1
position: 460042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:441300-442831:-1:exon

LOC116957749
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957749
product: zinc finger protein OZF-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_032980086.1
SIO_010081: LOC116957749
subclass of: SO_0000673
so part of: LOC116957749
location: complement(join(441301..442831,465457..465535))
location: region:441301-465535:-1
so has part: feature:465457-465535:-1:exon
so has part: feature:441301-442831:-1:exon

position:441301:-1
position: 441301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465457-465535:-1:exon

position:465457:-1
position: 465457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:441301-442831:-1:exon

LOC116957749
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957749
product: zinc finger protein OZF-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032980087.1
SIO_010081: LOC116957749
subclass of: SO_0000673
so part of: LOC116957749
location: complement(join(441301..442831,449303..449954))
location: region:441301-449954:-1
so has part: feature:449303-449954:-1:exon
so has part: feature:441301-442831:-1:exon

position:449954:-1
position: 449954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449303-449954:-1:exon

position:449303:-1
position: 449303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:441301-442831:-1:exon

LOC116957749
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957749
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein OZF-like isoform X1
translation: MVVVVVYCVCIMCLICQLRVGCLLVNHVMYADDLVIAAHSEEELEVLLLLGLEHATKRINDMEQRLNTTPAARRHQCDQSPYGTNATGHMNLQQKLHTTKKPFKCTVCEKSFGQSSHLKDHQRIHTGEKPFKCNVCGKAFAESGSVQKHQRTHSGKKPFKCTVCEKAFRQSSHLQIHQRTHTGEKPFKCTVCGKAFAVSGSFQTHQKTHSGEKPFKCTLCEKAFKLSSHLKIHQITHTGEKPFKCTVCGKGFTQSGSLTAHQRQHTGEKPFKCTLCEKAFKLSSYLQIHQRTHTGEKPFKCTVCGKTFTQSGSLIVHQRQHTGKKPFTCTICGNAFAESESLQKHQRTHTGKKPFKCTVCEKAFGVSAYLQRHLKTHTGKKPFKCTVCGKAFARSEGRNRHEKTHKETEVESRSERERAEFSPFRMEQEPEGIPSFETWPGVKVECEDVKLEYEEVKVEYEEVKVEYEEVKVKSENEDSTPEPDVQMDGGSVKQEDDSD
SIO_010081: LOC116957749
subclass of: SO_0000673
so part of: LOC116957749
location: complement(join(441505..442831,460087..460259))
location: region:441505-460259:-1
so has part: feature:460087-460259:-1:exon
so has part: feature:441505-442831:-1:exon

XP_032835976.1
type: Protein
SIO_000068: ncbiprotein

position:441505:-1
position: 441505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460259:-1
position: 460259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460087-460259:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441505-442831:-1:exon

LOC116957749
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957749
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein OZF-like isoform X2
translation: MEQRLNTTPAARRHQCDQSPYGTNATGHMNLQQKLHTTKKPFKCTVCEKSFGQSSHLKDHQRIHTGEKPFKCNVCGKAFAESGSVQKHQRTHSGKKPFKCTVCEKAFRQSSHLQIHQRTHTGEKPFKCTVCGKAFAVSGSFQTHQKTHSGEKPFKCTLCEKAFKLSSHLKIHQITHTGEKPFKCTVCGKGFTQSGSLTAHQRQHTGEKPFKCTLCEKAFKLSSYLQIHQRTHTGEKPFKCTVCGKTFTQSGSLIVHQRQHTGKKPFTCTICGNAFAESESLQKHQRTHTGKKPFKCTVCEKAFGVSAYLQRHLKTHTGKKPFKCTVCGKAFARSEGRNRHEKTHKETEVESRSERERAEFSPFRMEQEPEGIPSFETWPGVKVECEDVKLEYEEVKVEYEEVKVEYEEVKVKSENEDSTPEPDVQMDGGSVKQEDDSD
SIO_010081: LOC116957749
subclass of: SO_0000673
so part of: LOC116957749
location: complement(441505..442821)
location: region:441505-442821:-1
so has part: feature:441505-442821:-1:exon

XP_032835977.1
type: Protein
SIO_000068: ncbiprotein

position:442821:-1
position: 442821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441505-442821:-1:exon

LOC116957749
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957749
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein OZF-like isoform X2
translation: MEQRLNTTPAARRHQCDQSPYGTNATGHMNLQQKLHTTKKPFKCTVCEKSFGQSSHLKDHQRIHTGEKPFKCNVCGKAFAESGSVQKHQRTHSGKKPFKCTVCEKAFRQSSHLQIHQRTHTGEKPFKCTVCGKAFAVSGSFQTHQKTHSGEKPFKCTLCEKAFKLSSHLKIHQITHTGEKPFKCTVCGKGFTQSGSLTAHQRQHTGEKPFKCTLCEKAFKLSSYLQIHQRTHTGEKPFKCTVCGKTFTQSGSLIVHQRQHTGKKPFTCTICGNAFAESESLQKHQRTHTGKKPFKCTVCEKAFGVSAYLQRHLKTHTGKKPFKCTVCGKAFARSEGRNRHEKTHKETEVESRSERERAEFSPFRMEQEPEGIPSFETWPGVKVECEDVKLEYEEVKVEYEEVKVEYEEVKVKSENEDSTPEPDVQMDGGSVKQEDDSD
SIO_010081: LOC116957749
subclass of: SO_0000673
so part of: LOC116957749
location: complement(441505..442821)
location: region:441505-442821:-1
so has part: feature:441505-442821:-1:exon

XP_032835978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441505-442821:-1:exon

LOC116957749
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957749
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein OZF-like isoform X2
translation: MEQRLNTTPAARRHQCDQSPYGTNATGHMNLQQKLHTTKKPFKCTVCEKSFGQSSHLKDHQRIHTGEKPFKCNVCGKAFAESGSVQKHQRTHSGKKPFKCTVCEKAFRQSSHLQIHQRTHTGEKPFKCTVCGKAFAVSGSFQTHQKTHSGEKPFKCTLCEKAFKLSSHLKIHQITHTGEKPFKCTVCGKGFTQSGSLTAHQRQHTGEKPFKCTLCEKAFKLSSYLQIHQRTHTGEKPFKCTVCGKTFTQSGSLIVHQRQHTGKKPFTCTICGNAFAESESLQKHQRTHTGKKPFKCTVCEKAFGVSAYLQRHLKTHTGKKPFKCTVCGKAFARSEGRNRHEKTHKETEVESRSERERAEFSPFRMEQEPEGIPSFETWPGVKVECEDVKLEYEEVKVEYEEVKVEYEEVKVKSENEDSTPEPDVQMDGGSVKQEDDSD
SIO_010081: LOC116957749
subclass of: SO_0000673
so part of: LOC116957749
location: complement(441505..442821)
location: region:441505-442821:-1
so has part: feature:441505-442821:-1:exon

XP_032835979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441505-442821:-1:exon

LOC116957750
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(473301..499444)
location: region:473301-499444:-1
so has part: feature:473301-499444:-1:exon
subclass of: SO_0000010

116957750
type: Gene
SIO_000068: ncbigene

position:473301:-1
position: 473301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499444:-1
position: 499444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473301-499444:-1:exon

LOC116957750
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957750
product: gastrula zinc finger protein XlCGF7.1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_032980089.1
SIO_010081: LOC116957750
subclass of: SO_0000673
so part of: LOC116957750
location: complement(join(473301..475027,499337..499444))
location: region:473301-499444:-1
so has part: feature:499337-499444:-1:exon
so has part: feature:473301-475027:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499337-499444:-1:exon

position:499337:-1
position: 499337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:473301-475027:-1:exon

position:475027:-1
position: 475027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrula zinc finger protein XlCGF7.1-like
translation: MEQRPKTPPGARTHQCDQCPYGMDQTGHMHLHQKSHTAKKPFKCTVCGKAFGKSTQLQIHYRTHSGETPFKCTVCEKAFRQLSHLQMHQRTHTGEKPFKCIVCGKAFKQSASLNVHQRTHTGEKPFKCTLCGKAFAESGHFYKHQRTHSGEKPFMCTVCGKAFSQSSYLRNHQRTHTGEKPFKCALCGKAFARSEARKRHEKIHKETEVETRSENQSAALSPSRMEQGPEDNPSLATWRAVKVECEEVKVECEDVKVDCEEVKVKCEVKVKCEGEM
SIO_010081: LOC116957750
subclass of: SO_0000673
so part of: LOC116957750
location: complement(474187..475017)
location: region:474187-475017:-1
so has part: feature:474187-475017:-1:exon

XP_032835980.1
type: Protein
SIO_000068: ncbiprotein

position:474187:-1
position: 474187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475017:-1
position: 475017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474187-475017:-1:exon