Petromyzon marinus isolate kPetMar1 chromosome 84, kPetMar1.pri, whole genome shotgun sequence.
type: Entry
definition: Petromyzon marinus isolate kPetMar1 chromosome 84, kPetMar1.pri, whole genome shotgun sequence.
sequence version: NC_046152.1
sequence date: 2020-03-20
sequence: sequence
division: CON
label: NC_046152.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA611764
dblink: SAMN12629506
keyword: WGS
keyword: RefSeq
source: Petromyzon marinus (sea lamprey)
organism: Petromyzon marinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021524.1.\nAssembly name: kPetMar1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/24. The original whole-genome shotgun project has the\naccession JAAIYE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-DEC-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_dups v. github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n scaff10x v. 4.1.0; Bionano Solve DLS v.\n 3.2.1; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. smrtlink_6.0.0.47841;\n longranger align v. 2.2.2; freebayes\n Illumina polishing v. 1.3.1; gEVAL manual\n curation v. 2019-12-09; VGP assembly\n pipeline individual v. 1.6\nAssembly Name :: kPetMar1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 62.36x\nSequencing Technology :: PacBio Sequel I CLR; llumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Petromyzon marinus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 585383
topology: linear
so has quality: SO_0000987
location: 1..585383
location: region:1-585383:1
RO_0002162: 7757

NC_046152
type: RefSeq
SIO_000068: refseq

PRJNA611764
type: BioProject
SIO_000068: bioproject

SAMN12629506
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585383:1
position: 585383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-585383:1:source
so part of: sequence
organism: Petromyzon marinus
mol type: genomic DNA
isolate: kPetMar1
chromosome: 84
sex: male
tissue type: sperm
dev stage: adult
country: USA: Great Lakes Fisheries Commission
lat lon: 42.2821 N 83.74847 W
collection date: 12-Jun-2018
collected by: Jeremiah Smith

7757
type: Taxonomy
SIO_000068: taxonomy

LOC116957736
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957736
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10551..37965
location: region:10551-37965:1
so has part: feature:10551-37965:1:exon
subclass of: SO_0000010

116957736
type: Gene
SIO_000068: ncbigene

position:10551:1
position: 10551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37965:1
position: 37965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10551-37965:1:exon

LOC116957736
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957736
product: NACHT, LRR and PYD domains-containing protein 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032980061.1
SIO_010081: LOC116957736
subclass of: SO_0000673
so part of: LOC116957736
location: join(10551..11248,13899..15573,24843..24929,26778..26861,27778..27864,35629..35712,37413..37965)
location: region:10551-37965:1
so has part: feature:10551-11248:1:exon
so has part: feature:13899-15573:1:exon
so has part: feature:24843-24929:1:exon
so has part: feature:26778-26861:1:exon
so has part: feature:27778-27864:1:exon
so has part: feature:35629-35712:1:exon
so has part: feature:37413-37965:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10551-11248:1:exon

position:11248:1
position: 11248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13899-15573:1:exon

position:13899:1
position: 13899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15573:1
position: 15573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:24843-24929:1:exon

position:24843:1
position: 24843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24929:1
position: 24929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:26778-26861:1:exon

position:26778:1
position: 26778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26861:1
position: 26861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:27778-27864:1:exon

position:27778:1
position: 27778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27864:1
position: 27864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:35629-35712:1:exon

position:35629:1
position: 35629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35712:1
position: 35712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:37413-37965:1:exon

position:37413:1
position: 37413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957736
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957736
product: NACHT, LRR and PYD domains-containing protein 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032980060.1
SIO_010081: LOC116957736
subclass of: SO_0000673
so part of: LOC116957736
location: join(10553..11248,13621..13683,13899..15573,24843..24929,26778..26861,27778..27864,35629..35712,37413..37965)
location: region:10553-37965:1
so has part: feature:10553-11248:1:exon
so has part: feature:13621-13683:1:exon
so has part: feature:13899-15573:1:exon
so has part: feature:24843-24929:1:exon
so has part: feature:26778-26861:1:exon
so has part: feature:27778-27864:1:exon
so has part: feature:35629-35712:1:exon
so has part: feature:37413-37965:1:exon

position:10553:1
position: 10553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10553-11248:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13621-13683:1:exon

position:13621:1
position: 13621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13683:1
position: 13683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13899-15573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24843-24929:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26778-26861:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27778-27864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:35629-35712:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:37413-37965:1:exon

LOC116957736
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957736
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT, LRR and PYD domains-containing protein 3-like isoform X1
translation: MASKDPAYEIIRTNKVNLQKYLQAKSSEVLDYSYQTKIVLDSEYASLKSENDPIVRTRHLVDLVLDKGEHVCMRFLEAVLVPLRSEIPLLDQWISQHEQQLNVMGIDLSRTAGKAIPGAASRQTNKTTGWNISVMIKNIFYKDNPGEDYREFLLKLTSLTRDYDARPGEPAVFLSERMVKPILVPYYRHQETKEHELLARGKQHEELMKRAQREGMTYNNLFDPVGKKKHPRLVIVVGTPGSGKTMLSNFIVHSLLSGERVFAQCFEHIVLIRFREINDVGEVSLAELFSVLHSCLGNKADEVFTNQERTILVMDGLDEFGKRLHYANACTDPHKTATVEAIIAALVNGNLLPKASVFITTRPIAMEQMSEVNVDRAVEITGFSNKDKIAFFNKFYQDRSLAERALKLLQENETVNTLSQNPSFCHIAAITLKEHLQKSDHSEIILKSMTDLFTQYVFGLIVHHGRGSRGAKEIVSSLANMALKGVQQNIQMFSQKDLEECFVSSSELGSTFINKVFTCEGIQQGSCYSFSHLTMQELFAAIAVHLSHSTRPVSDVIKAIEDSKDGRFDVFQRFFCGLASSTPWKLFEGILDPPSADYQKEIIEWLNRSMKTQKVDKHRLISLLHCVHELQDRKSLSDATRSMTDIDLSLTRLSLPDCAAISWILLQREEPVETLNLLGCGIGTEEMKRLQTGLHRCKELWLGHNKIGDSGLQLIADVMLVREGSLKWLDLRQCSLTDKSGSSLSVILKANTGLKFLRLSLNVIGDSGLRLLADVMLGREGSLKWLHLQRCSLTDKSIPALHDIMITNKALRTLMVGGNDFSKEGKQELRSKWTPRGGLRL
SIO_010081: LOC116957736
subclass of: SO_0000673
so part of: LOC116957736
location: join(10885..11248,13621..13683,13899..15573,24843..24929,26778..26861,27778..27864,35629..35712,37413..37494)
location: region:10885-37494:1
so has part: feature:10885-11248:1:exon
so has part: feature:13621-13683:1:exon
so has part: feature:13899-15573:1:exon
so has part: feature:24843-24929:1:exon
so has part: feature:26778-26861:1:exon
so has part: feature:27778-27864:1:exon
so has part: feature:35629-35712:1:exon
so has part: feature:37413-37494:1:exon

XP_032835951.1
type: Protein
SIO_000068: ncbiprotein

position:10885:1
position: 10885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37494:1
position: 37494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10885-11248:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13621-13683:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13899-15573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24843-24929:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26778-26861:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27778-27864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:35629-35712:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:37413-37494:1:exon

LOC116957736
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957736
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT, LRR and PYD domains-containing protein 3-like isoform X2
translation: MASKDPAYEIIRTNKVNLQKYLQAKSSEVLDYSYQTKIVLDSEYASLKSENDPIVRTRHLVDLVLDKGEHVCMRFLEAVLVPLRSEIPLLDQWISQHEQQLNVMGIDLSRTAGKAIPGAASHNPGEDYREFLLKLTSLTRDYDARPGEPAVFLSERMVKPILVPYYRHQETKEHELLARGKQHEELMKRAQREGMTYNNLFDPVGKKKHPRLVIVVGTPGSGKTMLSNFIVHSLLSGERVFAQCFEHIVLIRFREINDVGEVSLAELFSVLHSCLGNKADEVFTNQERTILVMDGLDEFGKRLHYANACTDPHKTATVEAIIAALVNGNLLPKASVFITTRPIAMEQMSEVNVDRAVEITGFSNKDKIAFFNKFYQDRSLAERALKLLQENETVNTLSQNPSFCHIAAITLKEHLQKSDHSEIILKSMTDLFTQYVFGLIVHHGRGSRGAKEIVSSLANMALKGVQQNIQMFSQKDLEECFVSSSELGSTFINKVFTCEGIQQGSCYSFSHLTMQELFAAIAVHLSHSTRPVSDVIKAIEDSKDGRFDVFQRFFCGLASSTPWKLFEGILDPPSADYQKEIIEWLNRSMKTQKVDKHRLISLLHCVHELQDRKSLSDATRSMTDIDLSLTRLSLPDCAAISWILLQREEPVETLNLLGCGIGTEEMKRLQTGLHRCKELWLGHNKIGDSGLQLIADVMLVREGSLKWLDLRQCSLTDKSGSSLSVILKANTGLKFLRLSLNVIGDSGLRLLADVMLGREGSLKWLHLQRCSLTDKSIPALHDIMITNKALRTLMVGGNDFSKEGKQELRSKWTPRGGLRL
SIO_010081: LOC116957736
subclass of: SO_0000673
so part of: LOC116957736
location: join(10885..11248,13899..15573,24843..24929,26778..26861,27778..27864,35629..35712,37413..37494)
location: region:10885-37494:1
so has part: feature:10885-11248:1:exon
so has part: feature:13899-15573:1:exon
so has part: feature:24843-24929:1:exon
so has part: feature:26778-26861:1:exon
so has part: feature:27778-27864:1:exon
so has part: feature:35629-35712:1:exon
so has part: feature:37413-37494:1:exon

XP_032835952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10885-11248:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13899-15573:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24843-24929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26778-26861:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27778-27864:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:35629-35712:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:37413-37494:1:exon

LOC116957728
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(80311..131402)
location: region:80311-131402:-1
so has part: feature:80311-131402:-1:exon
subclass of: SO_0000010

116957728
type: Gene
SIO_000068: ncbigene

position:80311:-1
position: 80311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131402:-1
position: 131402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80311-131402:-1:exon

LOC116957728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957728
product: serine/arginine repetitive matrix protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_032980051.1
SIO_010081: LOC116957728
subclass of: SO_0000673
so part of: LOC116957728
location: complement(join(80311..82214,86603..86764,86999..87073,87500..87940,89778..89965,95034..95202,98255..98323,98580..98645,100823..101029,105398..105484,107045..107346,131351..131402))
location: region:80311-131402:-1
so has part: feature:131351-131402:-1:exon
so has part: feature:107045-107346:-1:exon
so has part: feature:105398-105484:-1:exon
so has part: feature:100823-101029:-1:exon
so has part: feature:98580-98645:-1:exon
so has part: feature:98255-98323:-1:exon
so has part: feature:95034-95202:-1:exon
so has part: feature:89778-89965:-1:exon
so has part: feature:87500-87940:-1:exon
so has part: feature:86999-87073:-1:exon
so has part: feature:86603-86764:-1:exon
so has part: feature:80311-82214:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131351-131402:-1:exon

position:131351:-1
position: 131351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:107045-107346:-1:exon

position:107045:-1
position: 107045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107346:-1
position: 107346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:105398-105484:-1:exon

position:105398:-1
position: 105398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105484:-1
position: 105484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:100823-101029:-1:exon

position:100823:-1
position: 100823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101029:-1
position: 101029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:98580-98645:-1:exon

position:98580:-1
position: 98580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98645:-1
position: 98645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:98255-98323:-1:exon

position:98255:-1
position: 98255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98323:-1
position: 98323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:95034-95202:-1:exon

position:95034:-1
position: 95034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95202:-1
position: 95202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:89778-89965:-1:exon

position:89778:-1
position: 89778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89965:-1
position: 89965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:87500-87940:-1:exon

position:87500:-1
position: 87500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87940:-1
position: 87940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:86999-87073:-1:exon

position:86999:-1
position: 86999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87073:-1
position: 87073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:86603-86764:-1:exon

position:86603:-1
position: 86603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86764:-1
position: 86764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:80311-82214:-1:exon

position:82214:-1
position: 82214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 2-like
translation: MNRVAAPLASRSGEGRLHSGGSTRSEPATGGDGGAALVEDEAHNGLIGSGGAAGGDDDGGDDGGDGGGDGGDLAENEARRRRVEAKCAELAEMMWEEGCGREDIELKVSAFRRLLLNKELEASQRRQAEDAVRALSRGGEGEGLEGEGEEGEERQSSGRGVAVATEMRGPPCNGAQGERSDPSGRRRHRKGARRRRSIGKKKRKRSSKKRDKRHREKSERAEGGVTSPKAGDLHTTSALSRREDATGSLDQPRSESHDQPGQWESGAATAVVATAPTSSVAPAPPGRAHNGRLATPRGSQLEPLRVVGNQQGLTLGGGAEGEGGEEGEGPDPHPTDLVPSDPAAAVSPAGGGTLAGIVNRVVPRGSTPPRGRGSRRKRRRASQRGSQQRSQWGSQRGSQRGSQQGYQRGSHQGSQRASRPGGSRSVSGSRSGSGSRFSSGSRSGSGSRSRSSPPARNIARESRESRTRSRSRSRNRSRSRTRSRSRNRSRSQSRARSPTTTNASKTRSPSSPGRRSSTRRDPAPRAGAPYNRQQGGDRERQQQPPPPQPQPGGERHRRQRRGGSFSPLRKRRRDSPSHLEPRRITSARKRPVPYYRPSPPSTSSSSSSSSSSPSSSTSSRRSGRHGNRSRSSSSGSRGNRSGSSSQTPARNTRRKARQRRHHHRGEHSSSRGGSSGSSSRGSSRGSSRGSSISSRRRRSSLTSRSEWSGTTKSWSRSRDRSRSRIRTSSRESYNSSGSGIGGRSWSRPRSRSGGSDGGVGKTRAGARKRRPGAAKSKRRPGSGAGRGRKNRAGSSPSASPGLSRSRSRSSRRGSRSGATGTRSRSGSLAGGVGGSGGGGGRGKTRAGARRSSRSWSWESEGSATAGEAQPRPGNERLHR
SIO_010081: LOC116957728
subclass of: SO_0000673
so part of: LOC116957728
location: complement(join(81332..82214,86603..86764,86999..87073,87500..87940,89778..89965,95034..95202,98255..98323,98580..98645,100823..101029,105398..105484,107045..107337))
location: region:81332-107337:-1
so has part: feature:107045-107337:-1:exon
so has part: feature:105398-105484:-1:exon
so has part: feature:100823-101029:-1:exon
so has part: feature:98580-98645:-1:exon
so has part: feature:98255-98323:-1:exon
so has part: feature:95034-95202:-1:exon
so has part: feature:89778-89965:-1:exon
so has part: feature:87500-87940:-1:exon
so has part: feature:86999-87073:-1:exon
so has part: feature:86603-86764:-1:exon
so has part: feature:81332-82214:-1:exon

XP_032835942.1
type: Protein
SIO_000068: ncbiprotein

position:81332:-1
position: 81332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107337:-1
position: 107337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107045-107337:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105398-105484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:100823-101029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98580-98645:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98255-98323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95034-95202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89778-89965:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87500-87940:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86999-87073:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86603-86764:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81332-82214:-1:exon

LOC116957732
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957732
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 134871..167839
location: region:134871-167839:1
so has part: feature:134871-167839:1:exon
subclass of: SO_0000010

116957732
type: Gene
SIO_000068: ncbigene

position:134871:1
position: 134871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167839:1
position: 167839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134871-167839:1:exon

LOC116957732
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957732
product: TBC1 domain family member 10A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_032980057.1
SIO_010081: LOC116957732
subclass of: SO_0000673
so part of: LOC116957732
location: join(134871..135458,146875..146992,148748..148855,149562..149668,152564..152678,160663..160728,162836..163028,163812..164038,166378..167839)
location: region:134871-167839:1
so has part: feature:134871-135458:1:exon
so has part: feature:146875-146992:1:exon
so has part: feature:148748-148855:1:exon
so has part: feature:149562-149668:1:exon
so has part: feature:152564-152678:1:exon
so has part: feature:160663-160728:1:exon
so has part: feature:162836-163028:1:exon
so has part: feature:163812-164038:1:exon
so has part: feature:166378-167839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134871-135458:1:exon

position:135458:1
position: 135458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146875-146992:1:exon

position:146875:1
position: 146875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146992:1
position: 146992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:148748-148855:1:exon

position:148748:1
position: 148748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148855:1
position: 148855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:149562-149668:1:exon

position:149562:1
position: 149562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149668:1
position: 149668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:152564-152678:1:exon

position:152564:1
position: 152564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152678:1
position: 152678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:160663-160728:1:exon

position:160663:1
position: 160663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160728:1
position: 160728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:162836-163028:1:exon

position:162836:1
position: 162836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163028:1
position: 163028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:163812-164038:1:exon

position:163812:1
position: 163812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164038:1
position: 164038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:166378-167839:1:exon

position:166378:1
position: 166378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957732
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957732
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 10A-like
translation: MAERGVAEAETTKPGQQQEEEVEEVPVELVREREVQWLRVLSDWDGWMGARPGKVRELCRLGVPNSLRARVWLFVTGARTRMQRNPGKFQELASAPGDPRWVEAIERDVHRQFPSHEMFTTMGGHGQRDLARVLQAFSVLCPEVGYCQAQAPIAATLLMRMPAEEAFWCLVQICEHYLPGYYSPGLEAVQQDCELLSLLLMPRLSPRARVLLHRLELPPTLILPEWLLCAFARTLPATSLARVWDMFLCEGVKVLLRVALVLLIRTFEELAAAAAADAGNAAGNAAGTTGNSAGTAGNDSDDLYSVLQALRCPSRHNTHPSLLVPQTLSLSLSTRSLRRLHLSVIHDRRRRRNQEAA
SIO_010081: LOC116957732
subclass of: SO_0000673
so part of: LOC116957732
location: join(135415..135458,146875..146992,148748..148855,149562..149668,152564..152678,160663..160728,162836..163028,163812..164038,166378..166473)
location: region:135415-166473:1
so has part: feature:135415-135458:1:exon
so has part: feature:146875-146992:1:exon
so has part: feature:148748-148855:1:exon
so has part: feature:149562-149668:1:exon
so has part: feature:152564-152678:1:exon
so has part: feature:160663-160728:1:exon
so has part: feature:162836-163028:1:exon
so has part: feature:163812-164038:1:exon
so has part: feature:166378-166473:1:exon

XP_032835948.1
type: Protein
SIO_000068: ncbiprotein

position:135415:1
position: 135415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166473:1
position: 166473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135415-135458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146875-146992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148748-148855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149562-149668:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152564-152678:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160663-160728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162836-163028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:163812-164038:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:166378-166473:1:exon

LOC116957724
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(180198..229836)
location: region:180198-229836:-1
so has part: feature:180198-229836:-1:exon
subclass of: SO_0000010

116957724
type: Gene
SIO_000068: ncbigene

position:180198:-1
position: 180198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229836:-1
position: 229836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180198-229836:-1:exon

LOC116957724
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957724
product: ras-related protein Rab-3D-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032980046.1
SIO_010081: LOC116957724
subclass of: SO_0000673
so part of: LOC116957724
location: complement(join(180198..182541,186244..186368,188396..188514,188997..189302,221049..221175,229453..229836))
location: region:180198-229836:-1
so has part: feature:229453-229836:-1:exon
so has part: feature:221049-221175:-1:exon
so has part: feature:188997-189302:-1:exon
so has part: feature:188396-188514:-1:exon
so has part: feature:186244-186368:-1:exon
so has part: feature:180198-182541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229453-229836:-1:exon

position:229453:-1
position: 229453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221049-221175:-1:exon

position:221049:-1
position: 221049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221175:-1
position: 221175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:188997-189302:-1:exon

position:188997:-1
position: 188997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189302:-1
position: 189302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:188396-188514:-1:exon

position:188396:-1
position: 188396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188514:-1
position: 188514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:186244-186368:-1:exon

position:186244:-1
position: 186244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186368:-1
position: 186368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:180198-182541:-1:exon

position:182541:-1
position: 182541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957724
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957724
product: ras-related protein Rab-3D-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032980047.1
SIO_010081: LOC116957724
subclass of: SO_0000673
so part of: LOC116957724
location: complement(join(180198..182541,186244..186368,188396..188514,188997..189302,221049..221175,229417..229836))
location: region:180198-229836:-1
so has part: feature:229417-229836:-1:exon
so has part: feature:221049-221175:-1:exon
so has part: feature:188997-189302:-1:exon
so has part: feature:188396-188514:-1:exon
so has part: feature:186244-186368:-1:exon
so has part: feature:180198-182541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229417-229836:-1:exon

position:229417:-1
position: 229417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221049-221175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188997-189302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188396-188514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186244-186368:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:180198-182541:-1:exon

LOC116957724
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957724
product: ras-related protein Rab-3D-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032980048.1
SIO_010081: LOC116957724
subclass of: SO_0000673
so part of: LOC116957724
location: complement(join(180198..182541,186244..186368,188396..188514,188997..189302,221049..221175,229409..229836))
location: region:180198-229836:-1
so has part: feature:229409-229836:-1:exon
so has part: feature:221049-221175:-1:exon
so has part: feature:188997-189302:-1:exon
so has part: feature:188396-188514:-1:exon
so has part: feature:186244-186368:-1:exon
so has part: feature:180198-182541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229409-229836:-1:exon

position:229409:-1
position: 229409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221049-221175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188997-189302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188396-188514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186244-186368:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:180198-182541:-1:exon

LOC116957724
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957724
product: ras-related protein Rab-3D-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032980049.1
SIO_010081: LOC116957724
subclass of: SO_0000673
so part of: LOC116957724
location: complement(join(180198..182541,186244..186368,188396..188514,188997..189302,221049..221175,226783..227352))
location: region:180198-227352:-1
so has part: feature:226783-227352:-1:exon
so has part: feature:221049-221175:-1:exon
so has part: feature:188997-189302:-1:exon
so has part: feature:188396-188514:-1:exon
so has part: feature:186244-186368:-1:exon
so has part: feature:180198-182541:-1:exon

position:227352:-1
position: 227352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226783-227352:-1:exon

position:226783:-1
position: 226783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221049-221175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188997-189302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188396-188514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186244-186368:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:180198-182541:-1:exon

LOC116957724
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-3D-like
translation: MASAADPKQQARGGGGGGGGGGGGAGELIAVGDAGGGAGGVEQPFDLMFKLLIIGNSGVGKTSLLFRYAEDSFTAAFVSTVGIDFKVKTLRRSGKTIKLQIWDTAGQERYRTITTAYYRGAMGFLLVYDITSQESFTAITDWATQITAYSWDSTRVIVVGNKCDLEPERVVATDTGKRLAEQLGFGFRETSSKENLGVAETFDALVDLICERLPSASSDNAGRGDAPVILAGGAHAQQACSC
SIO_010081: LOC116957724
subclass of: SO_0000673
so part of: LOC116957724
location: complement(join(182363..182541,186244..186368,188396..188514,188997..189302))
location: region:182363-189302:-1
so has part: feature:188997-189302:-1:exon
so has part: feature:188396-188514:-1:exon
so has part: feature:186244-186368:-1:exon
so has part: feature:182363-182541:-1:exon

XP_032835937.1
type: Protein
SIO_000068: ncbiprotein

position:182363:-1
position: 182363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188997-189302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188396-188514:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186244-186368:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:182363-182541:-1:exon

LOC116957724
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-3D-like
translation: MASAADPKQQARGGGGGGGGGGGGAGELIAVGDAGGGAGGVEQPFDLMFKLLIIGNSGVGKTSLLFRYAEDSFTAAFVSTVGIDFKVKTLRRSGKTIKLQIWDTAGQERYRTITTAYYRGAMGFLLVYDITSQESFTAITDWATQITAYSWDSTRVIVVGNKCDLEPERVVATDTGKRLAEQLGFGFRETSSKENLGVAETFDALVDLICERLPSASSDNAGRGDAPVILAGGAHAQQACSC
SIO_010081: LOC116957724
subclass of: SO_0000673
so part of: LOC116957724
location: complement(join(182363..182541,186244..186368,188396..188514,188997..189302))
location: region:182363-189302:-1
so has part: feature:188997-189302:-1:exon
so has part: feature:188396-188514:-1:exon
so has part: feature:186244-186368:-1:exon
so has part: feature:182363-182541:-1:exon

XP_032835938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188997-189302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188396-188514:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186244-186368:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:182363-182541:-1:exon

LOC116957724
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-3D-like
translation: MASAADPKQQARGGGGGGGGGGGGAGELIAVGDAGGGAGGVEQPFDLMFKLLIIGNSGVGKTSLLFRYAEDSFTAAFVSTVGIDFKVKTLRRSGKTIKLQIWDTAGQERYRTITTAYYRGAMGFLLVYDITSQESFTAITDWATQITAYSWDSTRVIVVGNKCDLEPERVVATDTGKRLAEQLGFGFRETSSKENLGVAETFDALVDLICERLPSASSDNAGRGDAPVILAGGAHAQQACSC
SIO_010081: LOC116957724
subclass of: SO_0000673
so part of: LOC116957724
location: complement(join(182363..182541,186244..186368,188396..188514,188997..189302))
location: region:182363-189302:-1
so has part: feature:188997-189302:-1:exon
so has part: feature:188396-188514:-1:exon
so has part: feature:186244-186368:-1:exon
so has part: feature:182363-182541:-1:exon

XP_032835939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188997-189302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188396-188514:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186244-186368:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:182363-182541:-1:exon

LOC116957724
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-3D-like
translation: MASAADPKQQARGGGGGGGGGGGGAGELIAVGDAGGGAGGVEQPFDLMFKLLIIGNSGVGKTSLLFRYAEDSFTAAFVSTVGIDFKVKTLRRSGKTIKLQIWDTAGQERYRTITTAYYRGAMGFLLVYDITSQESFTAITDWATQITAYSWDSTRVIVVGNKCDLEPERVVATDTGKRLAEQLGFGFRETSSKENLGVAETFDALVDLICERLPSASSDNAGRGDAPVILAGGAHAQQACSC
SIO_010081: LOC116957724
subclass of: SO_0000673
so part of: LOC116957724
location: complement(join(182363..182541,186244..186368,188396..188514,188997..189302))
location: region:182363-189302:-1
so has part: feature:188997-189302:-1:exon
so has part: feature:188396-188514:-1:exon
so has part: feature:186244-186368:-1:exon
so has part: feature:182363-182541:-1:exon

XP_032835940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188997-189302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188396-188514:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186244-186368:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:182363-182541:-1:exon

LOC116957726
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957726
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(182816..186237)
location: region:182816-186237:-1
so has part: feature:182816-186237:-1:exon
subclass of: SO_0000011

116957726
type: Gene
SIO_000068: ncbigene

position:182816:-1
position: 182816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186237:-1
position: 186237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182816-186237:-1:exon

LOC116957726
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957726
product: uncharacterized LOC116957726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004405240.1
SIO_010081: LOC116957726
subclass of: SO_0000673
so part of: LOC116957726
location: complement(join(182816..182981,183476..186237))
location: region:182816-186237:-1
so has part: feature:183476-186237:-1:exon
so has part: feature:182816-182981:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183476-186237:-1:exon

position:183476:-1
position: 183476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182816-182981:-1:exon

position:182981:-1
position: 182981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957725
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 230184..242998
location: region:230184-242998:1
so has part: feature:230184-242998:1:exon
subclass of: SO_0000010

116957725
type: Gene
SIO_000068: ncbigene

position:230184:1
position: 230184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242998:1
position: 242998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230184-242998:1:exon

LOC116957725
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957725
product: cytochrome b-c1 complex subunit 6, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_032980050.1
SIO_010081: LOC116957725
subclass of: SO_0000673
so part of: LOC116957725
location: join(230184..230317,232625..232660,240416..240571,242853..242998)
location: region:230184-242998:1
so has part: feature:230184-230317:1:exon
so has part: feature:232625-232660:1:exon
so has part: feature:240416-240571:1:exon
so has part: feature:242853-242998:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230184-230317:1:exon

position:230317:1
position: 230317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:232625-232660:1:exon

position:232625:1
position: 232625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232660:1
position: 232660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:240416-240571:1:exon

position:240416:1
position: 240416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240571:1
position: 240571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:242853-242998:1:exon

position:242853:1
position: 242853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b-c1 complex subunit 6, mitochondrial-like
translation: METVKAASPEPEPVEEEEEEDVVDPRDAVIERCTRGCESLKAELSSCEARVSSRTRTQETCAQELLDLIHCQDHCVSKHLFSKLK
SIO_010081: LOC116957725
subclass of: SO_0000673
so part of: LOC116957725
location: join(230285..230317,232625..232660,240416..240571,242853..242885)
location: region:230285-242885:1
so has part: feature:230285-230317:1:exon
so has part: feature:232625-232660:1:exon
so has part: feature:240416-240571:1:exon
so has part: feature:242853-242885:1:exon

XP_032835941.1
type: Protein
SIO_000068: ncbiprotein

position:230285:1
position: 230285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242885:1
position: 242885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230285-230317:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:232625-232660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240416-240571:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242853-242885:1:exon

LOC116957738
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 278589..302873
location: region:278589-302873:1
so has part: feature:278589-302873:1:exon
subclass of: SO_0000010

116957738
type: Gene
SIO_000068: ncbigene

position:278589:1
position: 278589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302873:1
position: 302873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278589-302873:1:exon

LOC116957738
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957738
product: sialate O-acetylesterase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032980062.1
SIO_010081: LOC116957738
subclass of: SO_0000673
so part of: LOC116957738
location: join(278589..278899,279817..279945,284587..284693,285155..285335,286762..286958,294455..294593,295389..295575,296541..296626,300000..300133,300555..300709,301251..301446,301907..302873)
location: region:278589-302873:1
so has part: feature:278589-278899:1:exon
so has part: feature:279817-279945:1:exon
so has part: feature:284587-284693:1:exon
so has part: feature:285155-285335:1:exon
so has part: feature:286762-286958:1:exon
so has part: feature:294455-294593:1:exon
so has part: feature:295389-295575:1:exon
so has part: feature:296541-296626:1:exon
so has part: feature:300000-300133:1:exon
so has part: feature:300555-300709:1:exon
so has part: feature:301251-301446:1:exon
so has part: feature:301907-302873:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278589-278899:1:exon

position:278899:1
position: 278899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:279817-279945:1:exon

position:279817:1
position: 279817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279945:1
position: 279945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:284587-284693:1:exon

position:284587:1
position: 284587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284693:1
position: 284693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:285155-285335:1:exon

position:285155:1
position: 285155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285335:1
position: 285335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:286762-286958:1:exon

position:286762:1
position: 286762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286958:1
position: 286958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:294455-294593:1:exon

position:294455:1
position: 294455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294593:1
position: 294593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:295389-295575:1:exon

position:295389:1
position: 295389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295575:1
position: 295575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:296541-296626:1:exon

position:296541:1
position: 296541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296626:1
position: 296626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:300000-300133:1:exon

position:300000:1
position: 300000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300133:1
position: 300133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:300555-300709:1:exon

position:300555:1
position: 300555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300709:1
position: 300709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:301251-301446:1:exon

position:301251:1
position: 301251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301446:1
position: 301446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:301907-302873:1:exon

position:301907:1
position: 301907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957738
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sialate O-acetylesterase-like
translation: MRLLTTPPHLPPRAWLKHSTWPPIMVLQRGPHGAFVWGFGKAGAEVVVRLYNGSRDLLQEHRSNVSAESQTWSVTLDPMDAGGPFSLNATQWSPVGSGPGGEVAWAEVVISDVWFGEVWLCVGQSNMQMTVNQVVNASWELTQAANFSLIRLFAVSLKTSLQPLDDFASVALPWSLPTADRLGMGDYTVFSAVCWFFGRNLHRTLGVPVGLVQSCWGGTPIESWSSPRALARCGLNAQPQSSGQLEPTVLWNAMIHPLLNMTLKGVIWYQGERNTGHNTDLYNCSFPAMINDWRREFYTATNGNTDPLLPFGFAQISTSDPYDNTDSYPRIRWHQSADYGFTPNSRMPKTFMAVTIDLCDRTSIYGWIHPRYKQEVATRLLLGAMSVAYNDSSSIFQGPFPELAIVNLTTQMLIIKYGQELIHHNGGRGDFQICCSQVRGQCLNEDWNQAPILSVQAQSVFLNISTCISTSRAVTSVRYAWSNWPCELYACALYGAGPTALPAPPFIKDVPLEVVYNSSVGGVPNGSVGGVPNGSVGGVPNGGVGGVPNSSVDGALFGHVEGFIMFMLVGFTMTVSMGL
SIO_010081: LOC116957738
subclass of: SO_0000673
so part of: LOC116957738
location: join(284673..284693,285155..285335,286762..286958,294455..294593,295389..295575,296541..296626,300000..300133,300555..300709,301251..301446,301907..302350)
location: region:284673-302350:1
so has part: feature:284673-284693:1:exon
so has part: feature:285155-285335:1:exon
so has part: feature:286762-286958:1:exon
so has part: feature:294455-294593:1:exon
so has part: feature:295389-295575:1:exon
so has part: feature:296541-296626:1:exon
so has part: feature:300000-300133:1:exon
so has part: feature:300555-300709:1:exon
so has part: feature:301251-301446:1:exon
so has part: feature:301907-302350:1:exon

XP_032835953.1
type: Protein
SIO_000068: ncbiprotein

position:284673:1
position: 284673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302350:1
position: 302350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284673-284693:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:285155-285335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286762-286958:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:294455-294593:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:295389-295575:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:296541-296626:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:300000-300133:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:300555-300709:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:301251-301446:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:301907-302350:1:exon

LOC116957740
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957740
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(294655..304361)
location: region:294655-304361:-1
so has part: feature:294655-304361:-1:exon
subclass of: SO_0000011

116957740
type: Gene
SIO_000068: ncbigene

position:294655:-1
position: 294655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304361:-1
position: 304361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294655-304361:-1:exon

LOC116957740
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957740
product: uncharacterized LOC116957740
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_004405242.1
SIO_010081: LOC116957740
subclass of: SO_0000673
so part of: LOC116957740
location: complement(join(294655..297102,304314..304361))
location: region:294655-304361:-1
so has part: feature:304314-304361:-1:exon
so has part: feature:294655-297102:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304314-304361:-1:exon

position:304314:-1
position: 304314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294655-297102:-1:exon

position:297102:-1
position: 297102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957739
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957739
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(304592..317758)
location: region:304592-317758:-1
so has part: feature:304592-317758:-1:exon
subclass of: SO_0000010

116957739
type: Gene
SIO_000068: ncbigene

position:304592:-1
position: 304592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317758:-1
position: 317758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304592-317758:-1:exon

LOC116957739
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957739
product: zinc finger protein 431-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_032980063.1
SIO_010081: LOC116957739
subclass of: SO_0000673
so part of: LOC116957739
location: complement(join(304592..306088,315759..315840,317748..317758))
location: region:304592-317758:-1
so has part: feature:317748-317758:-1:exon
so has part: feature:315759-315840:-1:exon
so has part: feature:304592-306088:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317748-317758:-1:exon

position:317748:-1
position: 317748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315759-315840:-1:exon

position:315759:-1
position: 315759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315840:-1
position: 315840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:304592-306088:-1:exon

position:306088:-1
position: 306088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957739
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957739
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 431-like
translation: MESRNVTQPGTKRYQCGQCPYSTDRTGNMKNHERTHTGEKPFKCTLCGEAFAQSGTLQIHQRAHTGEKPFKCPVCWKAFAHSPHLHRHRKTHTGEKPFKCTACGQAFIRSSHLEEHQRIHTGTKPFKCTVCGKAFTRSGARSRHEKIHKKGNVKSSESQSVAMNLSIIKQETGDTPSFEMWPGVKVEYVEVKVKCEELEANCEEVNLKCEEGNMKCEDEDSIPKPVLHINGGSVKEEQNLKSEATPSG
SIO_010081: LOC116957739
subclass of: SO_0000673
so part of: LOC116957739
location: complement(305336..306082)
location: region:305336-306082:-1
so has part: feature:305336-306082:-1:exon

XP_032835954.1
type: Protein
SIO_000068: ncbiprotein

position:305336:-1
position: 305336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306082:-1
position: 306082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305336-306082:-1:exon

LOC116957733
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 434522..454035
location: region:434522-454035:1
so has part: feature:434522-454035:1:exon
subclass of: SO_0000010

116957733
type: Gene
SIO_000068: ncbigene

position:434522:1
position: 434522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454035:1
position: 454035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434522-454035:1:exon

LOC116957733
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957733
product: uncharacterized LOC116957733
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032980058.1
SIO_010081: LOC116957733
subclass of: SO_0000673
so part of: LOC116957733
location: join(434522..435002,436984..437116,438278..438526,440988..442060,443226..443321,446350..446748,448066..448228,449450..449536,452268..452547,454028..454035)
location: region:434522-454035:1
so has part: feature:434522-435002:1:exon
so has part: feature:436984-437116:1:exon
so has part: feature:438278-438526:1:exon
so has part: feature:440988-442060:1:exon
so has part: feature:443226-443321:1:exon
so has part: feature:446350-446748:1:exon
so has part: feature:448066-448228:1:exon
so has part: feature:449450-449536:1:exon
so has part: feature:452268-452547:1:exon
so has part: feature:454028-454035:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:434522-435002:1:exon

position:435002:1
position: 435002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:436984-437116:1:exon

position:436984:1
position: 436984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437116:1
position: 437116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:438278-438526:1:exon

position:438278:1
position: 438278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438526:1
position: 438526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:440988-442060:1:exon

position:440988:1
position: 440988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442060:1
position: 442060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:443226-443321:1:exon

position:443226:1
position: 443226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443321:1
position: 443321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:446350-446748:1:exon

position:446350:1
position: 446350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446748:1
position: 446748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:448066-448228:1:exon

position:448066:1
position: 448066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448228:1
position: 448228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:449450-449536:1:exon

position:449450:1
position: 449450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449536:1
position: 449536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:452268-452547:1:exon

position:452268:1
position: 452268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452547:1
position: 452547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:454028-454035:1:exon

position:454028:1
position: 454028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957733
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957733
translation: MTKPQASPKSLKPPEKGEAGAVEWKCDCPCADERRDVQRKAQSEEVEPQTQCEKSWDRFNIRPDIDEEESSTRGLRVLRFILLTLLFLAVFGTAVLSKDAQSIVTLFSVSRVQCGGMQLSLVYLAEMKRVARQAGELDQNQFYSWVLAFVLVLPNIFSSIHCGLRLAFKNSDVSNRMMIALNCLLEGFIGLGAALMAIVVLPAESANLLSSILLLNGVTLVPSSLQFAGRWTGRRKPPRTSKLLSLASLCCCLVALALSVAKAALVAPDDGSTEARRFAHLALLLLSLLLVSLSWWENFLPAGWLREFRDAIGESRNLAEFYGSLVRTLIIVAVVLLDAGVEGEWRSFSAIGGIAEHRESMALALALLGVQAGASILCKWLANAACKIRQQGSCFAAPLCLATPAALAVVFALHLALDASGDSRYDCESVRRWNGSERTTPATASLFYDRTAAAVCSFVGAGEDSAVDAVATFGAGALWLAALLLAAAPALRPDDARRMEPTRELFVRRTPQPACLVAGLLLNRRQQQEEEVVVLEERSNHKQERVKIYLCATMWHETKEEMTKIISSILRLDRSEPKDLNVGSRGGGKKKNEKKEEMEKKENKKEEEEGKEGQDGKKEEEKEKNKEEKKTKENEEKKQKEEKEEKKWEKENNHEEEEGKTVKREPYDFSAHIYFDDAFERKGDRMVVNQFVTSLTDVIAEVCRYFEKNSKIPQEAPSMERTQTPYGARLFYKLPHGNSLCVHLKDKEMIRHRKRWSQVMYLYYLLGWKIYHKIHTVKKDEQEEWVERKKRNTYVLALDGDTDFYPSALSMLVDRLTRDSTVGAACGRIHTTGVGAQTAVVCVVVQGVCVVQDVCVWCRMCVCGAGCVCVVQDACVVQDVSP
SIO_010081: LOC116957733
subclass of: SO_0000673
so part of: LOC116957733
location: join(434842..435002,436984..437116,438278..438526,440988..442060,443226..443321,446350..446748,448066..448228,449450..449536,452268..452547,454028..454035)
location: region:434842-454035:1
so has part: feature:434842-435002:1:exon
so has part: feature:436984-437116:1:exon
so has part: feature:438278-438526:1:exon
so has part: feature:440988-442060:1:exon
so has part: feature:443226-443321:1:exon
so has part: feature:446350-446748:1:exon
so has part: feature:448066-448228:1:exon
so has part: feature:449450-449536:1:exon
so has part: feature:452268-452547:1:exon
so has part: feature:454028-454035:1:exon

XP_032835949.1
type: Protein
SIO_000068: ncbiprotein

position:434842:1
position: 434842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434842-435002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436984-437116:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:438278-438526:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:440988-442060:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:443226-443321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:446350-446748:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448066-448228:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:449450-449536:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452268-452547:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:454028-454035:1:exon

LOC116957734
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957734
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 460220..471779
location: region:460220-471779:1
so has part: feature:460220-471779:1:exon

116957734
type: Gene
SIO_000068: ncbigene

position:460220:1
position: 460220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471779:1
position: 471779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460220-471779:1:exon

LOC116957734
type: Exon
subclass of: SO_0000147
RO_0002162: 7757
gene: LOC116957734
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116957734
subclass of: SO_0000673
so part of: LOC116957734
location: 460220..460430
location: region:460220-460430:1
so has part: feature:460220-460430:1:exon

position:460430:1
position: 460430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460220-460430:1:exon

LOC116957734
type: Exon
subclass of: SO_0000147
RO_0002162: 7757
gene: LOC116957734
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116957734
subclass of: SO_0000673
so part of: LOC116957734
location: 462139..462381
location: region:462139-462381:1
so has part: feature:462139-462381:1:exon

position:462139:1
position: 462139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462381:1
position: 462381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462139-462381:1:exon

LOC116957734
type: Exon
subclass of: SO_0000147
RO_0002162: 7757
gene: LOC116957734
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116957734
subclass of: SO_0000673
so part of: LOC116957734
location: 463362..463646
location: region:463362-463646:1
so has part: feature:463362-463646:1:exon

position:463362:1
position: 463362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463646:1
position: 463646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463362-463646:1:exon

LOC116957734
type: Exon
subclass of: SO_0000147
RO_0002162: 7757
gene: LOC116957734
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116957734
subclass of: SO_0000673
so part of: LOC116957734
location: 465011..465126
location: region:465011-465126:1
so has part: feature:465011-465126:1:exon

position:465011:1
position: 465011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465126:1
position: 465126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465011-465126:1:exon

LOC116957734
type: Exon
subclass of: SO_0000147
RO_0002162: 7757
gene: LOC116957734
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116957734
subclass of: SO_0000673
so part of: LOC116957734
location: 468741..469032
location: region:468741-469032:1
so has part: feature:468741-469032:1:exon

position:468741:1
position: 468741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469032:1
position: 469032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468741-469032:1:exon

LOC116957734
type: Exon
subclass of: SO_0000147
RO_0002162: 7757
gene: LOC116957734
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116957734
subclass of: SO_0000673
so part of: LOC116957734
location: 470071..470204
location: region:470071-470204:1
so has part: feature:470071-470204:1:exon

position:470071:1
position: 470071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470204:1
position: 470204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470071-470204:1:exon

LOC116957734
type: Exon
subclass of: SO_0000147
RO_0002162: 7757
gene: LOC116957734
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116957734
subclass of: SO_0000673
so part of: LOC116957734
location: 471031..471779
location: region:471031-471779:1
so has part: feature:471031-471779:1:exon

position:471031:1
position: 471031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471031-471779:1:exon

LOC116957730
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 490781..509339
location: region:490781-509339:1
so has part: feature:490781-509339:1:exon
subclass of: SO_0000010

116957730
type: Gene
SIO_000068: ncbigene

position:490781:1
position: 490781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509339:1
position: 509339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490781-509339:1:exon

LOC116957730
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957730
product: chitin synthase chs-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032980056.1
SIO_010081: LOC116957730
subclass of: SO_0000673
so part of: LOC116957730
location: join(490781..491126,492342..492428,495132..495273,505805..506005,506988..507272,509003..509339)
location: region:490781-509339:1
so has part: feature:490781-491126:1:exon
so has part: feature:492342-492428:1:exon
so has part: feature:495132-495273:1:exon
so has part: feature:505805-506005:1:exon
so has part: feature:506988-507272:1:exon
so has part: feature:509003-509339:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:490781-491126:1:exon

position:491126:1
position: 491126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:492342-492428:1:exon

position:492342:1
position: 492342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492428:1
position: 492428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:495132-495273:1:exon

position:495132:1
position: 495132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495273:1
position: 495273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:505805-506005:1:exon

position:505805:1
position: 505805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506005:1
position: 506005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:506988-507272:1:exon

position:506988:1
position: 506988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507272:1
position: 507272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:509003-509339:1:exon

position:509003:1
position: 509003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chitin synthase chs-2-like
translation: MEWTQTPYGARLSYKLPHGNSLCVHLKDKEMIRHRKCLSQVMYLYYLLGWKIYHKIHTVKKDEQEEWVERKKRNTYVLALDGDTDFYPSALSMLVDRLTRDSTVGAACGRIHPTGVGPLVCYQKFEYAVGHWLQKTAEHVMGCVLCSPGCFSLFRAKAIMDDNVLKTYTTVATEALQYIQYDQGEDRWLCTLMLQQGWRVEYCTGSDAYTNAPQEFKEFFNQRRRWGPSTMANTFSILENGVRTAKKNPSISRLYILYQIIYTATSIMGPATVCLMIAGCFTFVFKMDQNWALLISIVPPALYIAVCFKT
SIO_010081: LOC116957730
subclass of: SO_0000673
so part of: LOC116957730
location: join(491007..491126,492342..492428,495132..495273,505805..506005,506988..507272,509003..509100)
location: region:491007-509100:1
so has part: feature:491007-491126:1:exon
so has part: feature:492342-492428:1:exon
so has part: feature:495132-495273:1:exon
so has part: feature:505805-506005:1:exon
so has part: feature:506988-507272:1:exon
so has part: feature:509003-509100:1:exon

XP_032835947.1
type: Protein
SIO_000068: ncbiprotein

position:491007:1
position: 491007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509100:1
position: 509100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491007-491126:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492342-492428:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495132-495273:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:505805-506005:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:506988-507272:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:509003-509100:1:exon

LOC116957729
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 512352..525933
location: region:512352-525933:1
so has part: feature:512352-525933:1:exon
subclass of: SO_0000010

116957729
type: Gene
SIO_000068: ncbigene

position:512352:1
position: 512352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525933:1
position: 525933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512352-525933:1:exon

LOC116957729
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957729
product: uncharacterized LOC116957729, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032980054.1
SIO_010081: LOC116957729
subclass of: SO_0000673
so part of: LOC116957729
location: join(512352..513046,514080..514213,515039..515667,519919..520022,522920..523030,523422..523624,524379..525933)
location: region:512352-525933:1
so has part: feature:512352-513046:1:exon
so has part: feature:514080-514213:1:exon
so has part: feature:515039-515667:1:exon
so has part: feature:519919-520022:1:exon
so has part: feature:522920-523030:1:exon
so has part: feature:523422-523624:1:exon
so has part: feature:524379-525933:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:512352-513046:1:exon

position:513046:1
position: 513046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:514080-514213:1:exon

position:514080:1
position: 514080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514213:1
position: 514213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:515039-515667:1:exon

position:515039:1
position: 515039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515667:1
position: 515667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:519919-520022:1:exon

position:519919:1
position: 519919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520022:1
position: 520022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:522920-523030:1:exon

position:522920:1
position: 522920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523030:1
position: 523030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:523422-523624:1:exon

position:523422:1
position: 523422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523624:1
position: 523624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:524379-525933:1:exon

position:524379:1
position: 524379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957729
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957729
product: uncharacterized LOC116957729, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032980053.1
SIO_010081: LOC116957729
subclass of: SO_0000673
so part of: LOC116957729
location: join(512353..514213,515039..515667,519919..520022,523422..523624,524379..525933)
location: region:512353-525933:1
so has part: feature:512353-514213:1:exon
so has part: feature:515039-515667:1:exon
so has part: feature:519919-520022:1:exon
so has part: feature:523422-523624:1:exon
so has part: feature:524379-525933:1:exon

position:512353:1
position: 512353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512353-514213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515039-515667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519919-520022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:523422-523624:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:524379-525933:1:exon

LOC116957729
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957729
product: uncharacterized LOC116957729, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032980052.1
SIO_010081: LOC116957729
subclass of: SO_0000673
so part of: LOC116957729
location: join(512354..514213,515039..515667,519919..520022,522920..523030,523422..523624,524379..525933)
location: region:512354-525933:1
so has part: feature:512354-514213:1:exon
so has part: feature:515039-515667:1:exon
so has part: feature:519919-520022:1:exon
so has part: feature:522920-523030:1:exon
so has part: feature:523422-523624:1:exon
so has part: feature:524379-525933:1:exon

position:512354:1
position: 512354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512354-514213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515039-515667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519919-520022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:522920-523030:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523422-523624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:524379-525933:1:exon

LOC116957729
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957729 isoform X3
translation: MYNVSWGTRETKAPSEPSPKEKKERKHRLNGTKCCILPLEWDCFQWRISVLPKKYSALSQEDDSSSRVESCAVELDREMKLRPIEARQQDTTSTQMEHPEGAEIEVRGEDIANTHMEHPEGAETRPEDIVITQTDHPEGVESEARRQGIASTPTEHPEGAEIESRGENIANTQMEHPEGAETRPEDIASTQTDHPVGVESEEKRQGIASTGTEHPEGAEIELREEDIANTQMEHSEGAETRLEDIASTQTEHPEEVESKSRPPEQSDTDLALHTKGRHDLVWQRHQKMQVMFENVLPQGYAITQRCSLDQEEDEFWKSMISDYLKPLEEDDDHRKRVKQELFEIRNKGTFVYFMINALWLVATLALQFVGADLYIQIPSTKNEGTVIDVLPLAFMFLITFSSMLIVQFLAMLYHRLFTLLHVLSYVESSSSGQQSKRGAVGRDNKAFVNDGDDDDAQQRRLREIV
SIO_010081: LOC116957729
subclass of: SO_0000673
so part of: LOC116957729
location: join(512984..513046,514080..514213,515039..515667,519919..520022,522920..523030,523422..523624,524379..524532)
location: region:512984-524532:1
so has part: feature:512984-513046:1:exon
so has part: feature:514080-514213:1:exon
so has part: feature:515039-515667:1:exon
so has part: feature:519919-520022:1:exon
so has part: feature:522920-523030:1:exon
so has part: feature:523422-523624:1:exon
so has part: feature:524379-524532:1:exon

XP_032835945.1
type: Protein
SIO_000068: ncbiprotein

position:512984:1
position: 512984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524532:1
position: 524532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512984-513046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514080-514213:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:515039-515667:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519919-520022:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:522920-523030:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523422-523624:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524379-524532:1:exon

LOC116957729
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957729 isoform X1
translation: MFPPRICGSIPWCSGFLFANKIFIHGGPQSLDSYWRQFTEQLKLPSSLCALPAGLISLKDPAFSTMPILLSQQKKERKHRLNGTKCCILPLEWDCFQWRISVLPKKYSALSQEDDSSSRVESCAVELDREMKLRPIEARQQDTTSTQMEHPEGAEIEVRGEDIANTHMEHPEGAETRPEDIVITQTDHPEGVESEARRQGIASTPTEHPEGAEIESRGENIANTQMEHPEGAETRPEDIASTQTDHPVGVESEEKRQGIASTGTEHPEGAEIELREEDIANTQMEHSEGAETRLEDIASTQTEHPEEVESKSRPPEQSDTDLALHTKGRHDLVWQRHQKMQVMFENVLPQGYAITQRCSLDQEEDEFWKSMISDYLKPLEEDDDHRKRVKQELFEIRNKGTFVYFMINALWLVATLALQFVGADLYIQIPSTKNEGTVIDVLPLAFMFLITFSSMLIVQFLAMLYHRLFTLLHVLSYVESSSSGQQSKRGAVGRDNKAFVNDGDDDDAQQRRLREIV
SIO_010081: LOC116957729
subclass of: SO_0000673
so part of: LOC116957729
location: join(513861..514213,515039..515667,519919..520022,522920..523030,523422..523624,524379..524532)
location: region:513861-524532:1
so has part: feature:513861-514213:1:exon
so has part: feature:515039-515667:1:exon
so has part: feature:519919-520022:1:exon
so has part: feature:522920-523030:1:exon
so has part: feature:523422-523624:1:exon
so has part: feature:524379-524532:1:exon

XP_032835943.1
type: Protein
SIO_000068: ncbiprotein

position:513861:1
position: 513861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513861-514213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515039-515667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519919-520022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:522920-523030:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523422-523624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:524379-524532:1:exon

LOC116957729
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957729 isoform X2
translation: MFPPRICGSIPWCSGFLFANKIFIHGGPQSLDSYWRQFTEQLKLPSSLCALPAGLISLKDPAFSTMPILLSQQKKERKHRLNGTKCCILPLEWDCFQWRISVLPKKYSALSQEDDSSSRVESCAVELDREMKLRPIEARQQDTTSTQMEHPEGAEIEVRGEDIANTHMEHPEGAETRPEDIVITQTDHPEGVESEARRQGIASTPTEHPEGAEIESRGENIANTQMEHPEGAETRPEDIASTQTDHPVGVESEEKRQGIASTGTEHPEGAEIELREEDIANTQMEHSEGAETRLEDIASTQTEHPEEVESKSRPPEQSDTDLALHTKGRHDLVWQRHQKMQVMFENVLPQGYAITQRCSLDQGTFVYFMINALWLVATLALQFVGADLYIQIPSTKNEGTVIDVLPLAFMFLITFSSMLIVQFLAMLYHRLFTLLHVLSYVESSSSGQQSKRGAVGRDNKAFVNDGDDDDAQQRRLREIV
SIO_010081: LOC116957729
subclass of: SO_0000673
so part of: LOC116957729
location: join(513861..514213,515039..515667,519919..520022,523422..523624,524379..524532)
location: region:513861-524532:1
so has part: feature:513861-514213:1:exon
so has part: feature:515039-515667:1:exon
so has part: feature:519919-520022:1:exon
so has part: feature:523422-523624:1:exon
so has part: feature:524379-524532:1:exon

XP_032835944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513861-514213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515039-515667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519919-520022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:523422-523624:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:524379-524532:1:exon

LOC116957735
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 544566..549711
location: region:544566-549711:1
so has part: feature:544566-549711:1:exon
subclass of: SO_0000010

116957735
type: Gene
SIO_000068: ncbigene

position:544566:1
position: 544566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549711:1
position: 549711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544566-549711:1:exon

LOC116957735
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957735
product: NACHT, LRR and PYD domains-containing protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032980059.1
SIO_010081: LOC116957735
subclass of: SO_0000673
so part of: LOC116957735
location: join(544566..545549,547516..547578,547800..548970,549077..549711)
location: region:544566-549711:1
so has part: feature:544566-545549:1:exon
so has part: feature:547516-547578:1:exon
so has part: feature:547800-548970:1:exon
so has part: feature:549077-549711:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544566-545549:1:exon

position:545549:1
position: 545549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:547516-547578:1:exon

position:547516:1
position: 547516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547578:1
position: 547578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:547800-548970:1:exon

position:547800:1
position: 547800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548970:1
position: 548970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:549077-549711:1:exon

position:549077:1
position: 549077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT, LRR and PYD domains-containing protein 3-like
translation: MASKDPAYEIIKTNKVNLQKYLQAKSSEVLDHSYQTGIVLDSEYASLNSENDPVVQTRPLVNLVLIKGEQVCMIFLEDVLVRLRSEITLLDQWISQHEQQLNVIGVDLSRTAGKAIPGAASRKTNETSGWNIFVMMKNIFYKDNPGEDYREFLLKLTSLTRDCNARPGEPSVFLSERMVKPILVPYYHQQETKQHELLARGKQHEELMKRAQREGMTYNNLFDLIGKETHPRLVIVVGTPGSGKTMLSKFIVHSLLSGERVFARRFEHIVLITFREINDVGEVSLAELFSVLHSCLGKKADEVYANQERTLFVMDGLDEFGKCLHYANACTDPRKTATVEGIIAALVNGNLLPKASVLITTRPIAMAQLSGVNVDRAVEIAGFSHEDKIEFLRNFYKDRNLAERVLKLLQENETVNTLSQNPSFCHIAAITLKEHLQKSDHSEIILKSMTDLFTQYVFGLVEHHGRGSHGAKEILLSLANMALKGVQQNIQVFSQKDLEECVVSSSELGSTFINKVFTCEGIKQGSCFDLKLSCYSFSHLTIQEFFAAIAMHLTHSTRPVSDIIKAIEDSKDGRFDVFQRFFCGLASSTPWMFFEGILDPPSADSQKEIIEWLNHSMENQKVDKHRLISLLHCVHELHDRKSMSDATRSMTEIDLSFTRLSLPDCAAITSILLHREEPVETLNLFDCGIGIEEMKRLQPGLHRCKELV
SIO_010081: LOC116957735
subclass of: SO_0000673
so part of: LOC116957735
location: join(545186..545549,547516..547578,547800..548970,549077..549605)
location: region:545186-549605:1
so has part: feature:545186-545549:1:exon
so has part: feature:547516-547578:1:exon
so has part: feature:547800-548970:1:exon
so has part: feature:549077-549605:1:exon

XP_032835950.1
type: Protein
SIO_000068: ncbiprotein

position:545186:1
position: 545186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549605:1
position: 549605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545186-545549:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:547516-547578:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547800-548970:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549077-549605:1:exon

LOC116957731
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957731
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(557970..574106)
location: region:557970-574106:-1
so has part: feature:557970-574106:-1:exon
subclass of: SO_0000011

116957731
type: Gene
SIO_000068: ncbigene

position:557970:-1
position: 557970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574106:-1
position: 574106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557970-574106:-1:exon

LOC116957731
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957731
product: uncharacterized LOC116957731
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004405241.1
SIO_010081: LOC116957731
subclass of: SO_0000673
so part of: LOC116957731
location: complement(join(557970..558477,568794..568887,573989..574106))
location: region:557970-574106:-1
so has part: feature:573989-574106:-1:exon
so has part: feature:568794-568887:-1:exon
so has part: feature:557970-558477:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:573989-574106:-1:exon

position:573989:-1
position: 573989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:568794-568887:-1:exon

position:568794:-1
position: 568794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568887:-1
position: 568887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:557970-558477:-1:exon

position:558477:-1
position: 558477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition