Petromyzon marinus isolate kPetMar1 chromosome 78, kPetMar1.pri, whole genome shotgun sequence.
type: Entry
definition: Petromyzon marinus isolate kPetMar1 chromosome 78, kPetMar1.pri, whole genome shotgun sequence.
sequence version: NC_046146.1
sequence date: 2020-03-20
sequence: sequence
division: CON
label: NC_046146.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA611764
dblink: SAMN12629506
keyword: WGS
keyword: RefSeq
source: Petromyzon marinus (sea lamprey)
organism: Petromyzon marinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021518.1.\nAssembly name: kPetMar1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/24. The original whole-genome shotgun project has the\naccession JAAIYE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-DEC-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_dups v. github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n scaff10x v. 4.1.0; Bionano Solve DLS v.\n 3.2.1; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. smrtlink_6.0.0.47841;\n longranger align v. 2.2.2; freebayes\n Illumina polishing v. 1.3.1; gEVAL manual\n curation v. 2019-12-09; VGP assembly\n pipeline individual v. 1.6\nAssembly Name :: kPetMar1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 62.36x\nSequencing Technology :: PacBio Sequel I CLR; llumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Petromyzon marinus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 1871265
topology: linear
so has quality: SO_0000987
location: 1..1871265
location: region:1-1871265:1
RO_0002162: 7757

NC_046146
type: RefSeq
SIO_000068: refseq

PRJNA611764
type: BioProject
SIO_000068: bioproject

SAMN12629506
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1871265:1
position: 1871265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1871265:1:source
so part of: sequence
organism: Petromyzon marinus
mol type: genomic DNA
isolate: kPetMar1
chromosome: 78
sex: male
tissue type: sperm
dev stage: adult
country: USA: Great Lakes Fisheries Commission
lat lon: 42.2821 N 83.74847 W
collection date: 12-Jun-2018
collected by: Jeremiah Smith

7757
type: Taxonomy
SIO_000068: taxonomy

LOC116957610
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957610
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 366139..373921
location: region:366139-373921:1
so has part: feature:366139-373921:1:exon
subclass of: SO_0000011

116957610
type: Gene
SIO_000068: ncbigene

position:366139:1
position: 366139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373921:1
position: 373921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366139-373921:1:exon

LOC116957610
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957610
product: uncharacterized LOC116957610
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004405213.1
SIO_010081: LOC116957610
subclass of: SO_0000673
so part of: LOC116957610
location: join(366139..366280,369722..369819,372490..373921)
location: region:366139-373921:1
so has part: feature:366139-366280:1:exon
so has part: feature:369722-369819:1:exon
so has part: feature:372490-373921:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366139-366280:1:exon

position:366280:1
position: 366280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:369722-369819:1:exon

position:369722:1
position: 369722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369819:1
position: 369819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:372490-373921:1:exon

position:372490:1
position: 372490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957608
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957608
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 579338..603391
location: region:579338-603391:1
so has part: feature:579338-603391:1:exon
subclass of: SO_0000011

116957608
type: Gene
SIO_000068: ncbigene

position:579338:1
position: 579338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603391:1
position: 603391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579338-603391:1:exon

LOC116957608
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957608
product: uncharacterized LOC116957608
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004405211.1
SIO_010081: LOC116957608
subclass of: SO_0000673
so part of: LOC116957608
location: join(579338..580408,582998..583202,602658..603391)
location: region:579338-603391:1
so has part: feature:579338-580408:1:exon
so has part: feature:582998-583202:1:exon
so has part: feature:602658-603391:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:579338-580408:1:exon

position:580408:1
position: 580408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:582998-583202:1:exon

position:582998:1
position: 582998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583202:1
position: 583202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:602658-603391:1:exon

position:602658:1
position: 602658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957606
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957606
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(584780..597445)
location: region:584780-597445:-1
so has part: feature:584780-597445:-1:exon
subclass of: SO_0000010

116957606
type: Gene
SIO_000068: ncbigene

position:584780:-1
position: 584780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597445:-1
position: 597445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584780-597445:-1:exon

LOC116957606
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957606
product: zinc finger protein OZF-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032979857.1
SIO_010081: LOC116957606
subclass of: SO_0000673
so part of: LOC116957606
location: complement(join(584780..585579,588480..588484,589125..589522,595953..596244,596394..597445))
location: region:584780-597445:-1
so has part: feature:596394-597445:-1:exon
so has part: feature:595953-596244:-1:exon
so has part: feature:589125-589522:-1:exon
so has part: feature:588480-588484:-1:exon
so has part: feature:584780-585579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:596394-597445:-1:exon

position:596394:-1
position: 596394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:595953-596244:-1:exon

position:595953:-1
position: 595953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596244:-1
position: 596244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:589125-589522:-1:exon

position:589125:-1
position: 589125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589522:-1
position: 589522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:588480-588484:-1:exon

position:588480:-1
position: 588480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588484:-1
position: 588484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:584780-585579:-1:exon

position:585579:-1
position: 585579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957606
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957606
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein OZF-like
translation: MEQIRSPKPQAHGSKEPFNCSVCVKAFSRQSDLQIHQRTHTGEKPFPCSVCGKAFARSSTLQAHQKTHTGEKTFLCPVCGKAFSLSSTLQIHQRTHTGEKPFLCCVCGKAFVRSSTLQAHQRTHTGEKPFLCSMCGKAFAQSSTLQRHQRTHTGEKSFLCSVCGKAFAHSSTLQDHEKTHTREKPFLCSVCGKAFSQSSSLQDHKRTHTGEKPFLCSVCGKAFSQSNYLQRHQRTHTGEKPFLCSVCGKAFAQLSTLQTHQRTHTGEKPLPCSVCGKAFARSSTLQAHQKTHTREKPFLCPVCGKAFSLSSTLQIHQRTHTGEKPFLCSVCGKAFAQSSIRNRHQKVHDDRKLKSKGEIPGAAMSPEGDSTFDPMQLDPEGWLDVMEWLESQNES
SIO_010081: LOC116957606
subclass of: SO_0000673
so part of: LOC116957606
location: complement(join(585074..585579,588480..588484,589125..589522,595953..596231))
location: region:585074-596231:-1
so has part: feature:595953-596231:-1:exon
so has part: feature:589125-589522:-1:exon
so has part: feature:588480-588484:-1:exon
so has part: feature:585074-585579:-1:exon

XP_032835748.1
type: Protein
SIO_000068: ncbiprotein

position:585074:-1
position: 585074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596231:-1
position: 596231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595953-596231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589125-589522:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588480-588484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:585074-585579:-1:exon

LOC116957606
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7757
gene: LOC116957606
product: zinc finger protein OZF-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004405210.1
SIO_010081: LOC116957606
so part of: LOC116957606
location: complement(join(592285..593087,596394..597445))
location: region:592285-597445:-1
so has part: feature:596394-597445:-1:exon
so has part: feature:592285-593087:-1:exon

position:592285:-1
position: 592285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596394-597445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:592285-593087:-1:exon

position:593087:-1
position: 593087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957609
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957609
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 598246..599915
location: region:598246-599915:1
so has part: feature:598246-599915:1:exon
subclass of: SO_0000011

116957609
type: Gene
SIO_000068: ncbigene

position:598246:1
position: 598246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599915:1
position: 599915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598246-599915:1:exon

LOC116957609
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957609
product: uncharacterized LOC116957609
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004405212.1
SIO_010081: LOC116957609
subclass of: SO_0000673
so part of: LOC116957609
location: join(598246..599238,599757..599915)
location: region:598246-599915:1
so has part: feature:598246-599238:1:exon
so has part: feature:599757-599915:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:598246-599238:1:exon

position:599238:1
position: 599238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:599757-599915:1:exon

position:599757:1
position: 599757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957607
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<663747..>664298)
location: region:663747-664298:-1
so has part: feature:663747-664298:-1:exon
subclass of: SO_0000010

116957607
type: Gene
SIO_000068: ncbigene

position:663747:-1
position: 663747
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:664298:-1
position: 664298
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663747-664298:-1:exon

LOC116957607
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957607
product: cell wall protein DAN4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_032979859.1
SIO_010081: LOC116957607
subclass of: SO_0000673
so part of: LOC116957607
location: complement(<663747..>664298)
location: region:663747-664298:-1
so has part: feature:663747-664298:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663747-664298:-1:exon

LOC116957607
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell wall protein DAN4-like
translation: TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTITTTTTTTTITTTITTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTITTTTITTTTTTTTTTTTTTTTTTTTTTITTTTITTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
SIO_010081: LOC116957607
subclass of: SO_0000673
so part of: LOC116957607
location: complement(<663747..>664298)
location: region:663747-664298:-1
so has part: feature:663747-664298:-1:exon

XP_032835750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:663747-664298:-1:exon

LOC116957605
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957605
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(686265..691220)
location: region:686265-691220:-1
so has part: feature:686265-691220:-1:exon
subclass of: SO_0000010

116957605
type: Gene
SIO_000068: ncbigene

position:686265:-1
position: 686265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691220:-1
position: 691220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686265-691220:-1:exon

LOC116957605
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957605
product: mucin-5AC-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032979856.1
SIO_010081: LOC116957605
subclass of: SO_0000673
so part of: LOC116957605
location: complement(join(686265..689069,691019..691220))
location: region:686265-691220:-1
so has part: feature:691019-691220:-1:exon
so has part: feature:686265-689069:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:691019-691220:-1:exon

position:691019:-1
position: 691019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:686265-689069:-1:exon

position:689069:-1
position: 689069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957605
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-5AC-like
translation: MKSCDRFGRSSKGTCDLTSDIRPLTRAARLCLLPLIAGLVFVAIAMATWTGPHHLRTRPSPERAGDGPPTPPPARGPRTAGTRIGGGPRLRHVTCSRGSRRASDPSLRPRPKPHTDCGADPKLRGAAHPGPDPGPNPSPNPSPSATPSNAPTHGLRPRPRLKPRPNPRAEPGLSFSTGPRTGSDVTTGPGTIVPSVSPSVNRSRRPKSRHLSFRVNLCYNFSPFLKDSGLRSRHSPSTISDVKPDTTPTPDANRNDATPSRDTTPDAKATRNPTTNSTNPVPDSNPGSSGPGRPRLLRSPRAFSLARAESRLAASTATTTSTTTTTTASTTSTTTTTTTTTTTTTTTTTRGIGADDSIVRLDSSPVGHPVTSLRGRGVDPSRGGHSGSRGGRGHSGTNHRRGGGGGGGGGGGGLSRRSLARTASPKARGSDRCHLNLVEVRVSDLQLGFQSDEVISFQFCSGSCLHARSNYDLALSRVIHLHLPFAPIRRRRRQQQQQQQQQGKLDKREQAAVEEAAVRMRRRAGDGVNSEQPCCRPAAFEEVTFQNSEHKWETVANLSAKRCKCVL
SIO_010081: LOC116957605
subclass of: SO_0000673
so part of: LOC116957605
location: complement(join(687444..689069,691019..691096))
location: region:687444-691096:-1
so has part: feature:691019-691096:-1:exon
so has part: feature:687444-689069:-1:exon

XP_032835747.1
type: Protein
SIO_000068: ncbiprotein

position:687444:-1
position: 687444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691096:-1
position: 691096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:691019-691096:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687444-689069:-1:exon

LOC116957601
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 720685..731459
location: region:720685-731459:1
so has part: feature:720685-731459:1:exon
subclass of: SO_0000010

116957601
type: Gene
SIO_000068: ncbigene

position:720685:1
position: 720685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731459:1
position: 731459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:720685-731459:1:exon

LOC116957601
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7757
gene: LOC116957601
product: pollen-specific leucine-rich repeat extensin-like protein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004405206.1
SIO_010081: LOC116957601
so part of: LOC116957601
location: join(720685..722382,729793..730028,730289..730426,730947..731048,731275..731459)
location: region:720685-731459:1
so has part: feature:720685-722382:1:exon
so has part: feature:729793-730028:1:exon
so has part: feature:730289-730426:1:exon
so has part: feature:730947-731048:1:exon
so has part: feature:731275-731459:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:720685-722382:1:exon

position:722382:1
position: 722382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:729793-730028:1:exon

position:729793:1
position: 729793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730028:1
position: 730028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:730289-730426:1:exon

position:730289:1
position: 730289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730426:1
position: 730426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:730947-731048:1:exon

position:730947:1
position: 730947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731048:1
position: 731048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:731275-731459:1:exon

position:731275:1
position: 731275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957601
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7757
gene: LOC116957601
product: pollen-specific leucine-rich repeat extensin-like protein 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004405207.1
SIO_010081: LOC116957601
so part of: LOC116957601
location: join(720685..722310,729793..730028,730289..730426,730947..731048,731275..731459)
location: region:720685-731459:1
so has part: feature:720685-722310:1:exon
so has part: feature:729793-730028:1:exon
so has part: feature:730289-730426:1:exon
so has part: feature:730947-731048:1:exon
so has part: feature:731275-731459:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:720685-722310:1:exon

position:722310:1
position: 722310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:729793-730028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730289-730426:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730947-731048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:731275-731459:1:exon

LOC116957601
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957601
product: pollen-specific leucine-rich repeat extensin-like protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032979848.1
SIO_010081: LOC116957601
subclass of: SO_0000673
so part of: LOC116957601
location: join(728156..728468,729793..730028,730289..730426,730947..731048,731275..731459)
location: region:728156-731459:1
so has part: feature:728156-728468:1:exon
so has part: feature:729793-730028:1:exon
so has part: feature:730289-730426:1:exon
so has part: feature:730947-731048:1:exon
so has part: feature:731275-731459:1:exon

position:728156:1
position: 728156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:728156-728468:1:exon

position:728468:1
position: 728468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:729793-730028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730289-730426:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730947-731048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:731275-731459:1:exon

LOC116957601
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957601
product: pollen-specific leucine-rich repeat extensin-like protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032979847.1
SIO_010081: LOC116957601
subclass of: SO_0000673
so part of: LOC116957601
location: join(728570..728625,729793..730028,730289..730426,730947..731048,731275..731459)
location: region:728570-731459:1
so has part: feature:728570-728625:1:exon
so has part: feature:729793-730028:1:exon
so has part: feature:730289-730426:1:exon
so has part: feature:730947-731048:1:exon
so has part: feature:731275-731459:1:exon

position:728570:1
position: 728570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:728570-728625:1:exon

position:728625:1
position: 728625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:729793-730028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730289-730426:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730947-731048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:731275-731459:1:exon

LOC116957601
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pollen-specific leucine-rich repeat extensin-like protein 4
translation: MVEEVVAGGYSELMEQHQLMAGDPPGGQLETGGRGLVPTAPAHKGRGFEATNEISPPPYEKTAPLDSPPPYPAHNTDSPPVVPQLRSSSTGTATPSRPPALNTPPTRSAPT
SIO_010081: LOC116957601
subclass of: SO_0000673
so part of: LOC116957601
location: join(730370..730426,730947..731048,731275..731451)
location: region:730370-731451:1
so has part: feature:730370-730426:1:exon
so has part: feature:730947-731048:1:exon
so has part: feature:731275-731451:1:exon

XP_032835738.1
type: Protein
SIO_000068: ncbiprotein

position:730370:1
position: 730370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731451:1
position: 731451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730370-730426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730947-731048:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:731275-731451:1:exon

LOC116957601
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pollen-specific leucine-rich repeat extensin-like protein 4
translation: MVEEVVAGGYSELMEQHQLMAGDPPGGQLETGGRGLVPTAPAHKGRGFEATNEISPPPYEKTAPLDSPPPYPAHNTDSPPVVPQLRSSSTGTATPSRPPALNTPPTRSAPT
SIO_010081: LOC116957601
subclass of: SO_0000673
so part of: LOC116957601
location: join(730370..730426,730947..731048,731275..731451)
location: region:730370-731451:1
so has part: feature:730370-730426:1:exon
so has part: feature:730947-731048:1:exon
so has part: feature:731275-731451:1:exon

XP_032835739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:730370-730426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730947-731048:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:731275-731451:1:exon

LOC116957603
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957603
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(745159..774607)
location: region:745159-774607:-1
so has part: feature:745159-774607:-1:exon
subclass of: SO_0000010

116957603
type: Gene
SIO_000068: ncbigene

position:745159:-1
position: 745159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774607:-1
position: 774607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745159-774607:-1:exon

LOC116957603
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7757
gene: LOC116957603
product: interferon-induced protein 44-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004405208.1
SIO_010081: LOC116957603
so part of: LOC116957603
location: complement(join(745159..746710,758739..758836,761575..761722,770188..770337,773879..774074,774382..774607))
location: region:745159-774607:-1
so has part: feature:774382-774607:-1:exon
so has part: feature:773879-774074:-1:exon
so has part: feature:770188-770337:-1:exon
so has part: feature:761575-761722:-1:exon
so has part: feature:758739-758836:-1:exon
so has part: feature:745159-746710:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:774382-774607:-1:exon

position:774382:-1
position: 774382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:773879-774074:-1:exon

position:773879:-1
position: 773879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774074:-1
position: 774074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:770188-770337:-1:exon

position:770188:-1
position: 770188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770337:-1
position: 770337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:761575-761722:-1:exon

position:761575:-1
position: 761575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761722:-1
position: 761722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:758739-758836:-1:exon

position:758739:-1
position: 758739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758836:-1
position: 758836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:745159-746710:-1:exon

position:746710:-1
position: 746710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957603
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957603
product: interferon-induced protein 44-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032979855.1
SIO_010081: LOC116957603
subclass of: SO_0000673
so part of: LOC116957603
location: complement(join(745159..746710,758739..758836,761575..761722,770188..770337,773879..774074,774494..774598))
location: region:745159-774598:-1
so has part: feature:774494-774598:-1:exon
so has part: feature:773879-774074:-1:exon
so has part: feature:770188-770337:-1:exon
so has part: feature:761575-761722:-1:exon
so has part: feature:758739-758836:-1:exon
so has part: feature:745159-746710:-1:exon

position:774598:-1
position: 774598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774494-774598:-1:exon

position:774494:-1
position: 774494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:773879-774074:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:770188-770337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761575-761722:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:758739-758836:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:745159-746710:-1:exon

LOC116957603
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957603
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced protein 44-like
translation: MAQIQNMDTLKNKLINYNSPNKGIPANILLLGRSGHGKSSLINTWETAISDRIRSRAVTASTKGSSTTQHFLKYQLTSFQNQKETPINVNVMDTIGWEPQTFTFEMFNKILNGQIEDKQSFSDKTEMTSEPRNKVHCVAYVADLNQFQNVELDDLEIFKRFGKYARQKKNINTFVIITKVDVCLPEGTSISDIYKVKNIETMMKEICSALECDEKFVFPMTNYRDCMNVNTNTNILALSLLNALVDAASDFICDNNDGSKLN
SIO_010081: LOC116957603
subclass of: SO_0000673
so part of: LOC116957603
location: complement(join(746528..746710,758739..758836,761575..761722,770188..770337,773879..774074,774494..774507))
location: region:746528-774507:-1
so has part: feature:774494-774507:-1:exon
so has part: feature:773879-774074:-1:exon
so has part: feature:770188-770337:-1:exon
so has part: feature:761575-761722:-1:exon
so has part: feature:758739-758836:-1:exon
so has part: feature:746528-746710:-1:exon

XP_032835746.1
type: Protein
SIO_000068: ncbiprotein

position:746528:-1
position: 746528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774507:-1
position: 774507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774494-774507:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:773879-774074:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:770188-770337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761575-761722:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:758739-758836:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:746528-746710:-1:exon

LOC116957600
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957600
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(961160..1060540)
location: region:961160-1060540:-1
so has part: feature:961160-1060540:-1:exon
subclass of: SO_0000010

116957600
type: Gene
SIO_000068: ncbigene

position:961160:-1
position: 961160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060540:-1
position: 1060540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:961160-1060540:-1:exon

LOC116957600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957600
product: tetratricopeptide repeat protein 39A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032979845.1
SIO_010081: LOC116957600
subclass of: SO_0000673
so part of: LOC116957600
location: complement(join(961160..961335,969304..969429,973048..973165,978746..978848,984800..984923,986429..986520,1000558..1000719,1003539..1003598,1006074..1006141,1008037..1008145,1009155..1009196,1009410..1009475,1011658..1011757,1012110..1012174,1018818..1018885,1019331..1019404,1020037..1020168,1040145..1040246,1051706..1051750,1060361..1060540))
location: region:961160-1060540:-1
so has part: feature:1060361-1060540:-1:exon
so has part: feature:1051706-1051750:-1:exon
so has part: feature:1040145-1040246:-1:exon
so has part: feature:1020037-1020168:-1:exon
so has part: feature:1019331-1019404:-1:exon
so has part: feature:1018818-1018885:-1:exon
so has part: feature:1012110-1012174:-1:exon
so has part: feature:1011658-1011757:-1:exon
so has part: feature:1009410-1009475:-1:exon
so has part: feature:1009155-1009196:-1:exon
so has part: feature:1008037-1008145:-1:exon
so has part: feature:1006074-1006141:-1:exon
so has part: feature:1003539-1003598:-1:exon
so has part: feature:1000558-1000719:-1:exon
so has part: feature:986429-986520:-1:exon
so has part: feature:984800-984923:-1:exon
so has part: feature:978746-978848:-1:exon
so has part: feature:973048-973165:-1:exon
so has part: feature:969304-969429:-1:exon
so has part: feature:961160-961335:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1060361-1060540:-1:exon

position:1060361:-1
position: 1060361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1051706-1051750:-1:exon

position:1051706:-1
position: 1051706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051750:-1
position: 1051750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1040145-1040246:-1:exon

position:1040145:-1
position: 1040145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1040246:-1
position: 1040246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1020037-1020168:-1:exon

position:1020037:-1
position: 1020037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020168:-1
position: 1020168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1019331-1019404:-1:exon

position:1019331:-1
position: 1019331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019404:-1
position: 1019404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1018818-1018885:-1:exon

position:1018818:-1
position: 1018818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018885:-1
position: 1018885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1012110-1012174:-1:exon

position:1012110:-1
position: 1012110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012174:-1
position: 1012174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1011658-1011757:-1:exon

position:1011658:-1
position: 1011658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011757:-1
position: 1011757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1009410-1009475:-1:exon

position:1009410:-1
position: 1009410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009475:-1
position: 1009475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1009155-1009196:-1:exon

position:1009155:-1
position: 1009155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009196:-1
position: 1009196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1008037-1008145:-1:exon

position:1008037:-1
position: 1008037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008145:-1
position: 1008145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1006074-1006141:-1:exon

position:1006074:-1
position: 1006074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006141:-1
position: 1006141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1003539-1003598:-1:exon

position:1003539:-1
position: 1003539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003598:-1
position: 1003598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1000558-1000719:-1:exon

position:1000558:-1
position: 1000558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1000719:-1
position: 1000719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:986429-986520:-1:exon

position:986429:-1
position: 986429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986520:-1
position: 986520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:984800-984923:-1:exon

position:984800:-1
position: 984800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984923:-1
position: 984923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:978746-978848:-1:exon

position:978746:-1
position: 978746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978848:-1
position: 978848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:973048-973165:-1:exon

position:973048:-1
position: 973048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973165:-1
position: 973165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:969304-969429:-1:exon

position:969304:-1
position: 969304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969429:-1
position: 969429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:961160-961335:-1:exon

position:961335:-1
position: 961335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957600
product: tetratricopeptide repeat protein 39A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032979844.1
SIO_010081: LOC116957600
subclass of: SO_0000673
so part of: LOC116957600
location: complement(join(961160..961335,969304..969429,973048..973165,978746..978848,984800..984923,986429..986520,1000558..1000719,1003539..1003598,1006074..1006141,1008037..1008145,1009155..1009196,1009410..1009475,1011658..1011757,1012110..1012174,1018818..1018885,1019331..1019404,1020037..1020168,1040145..1040246,1051706..1051750,1060315..1060540))
location: region:961160-1060540:-1
so has part: feature:1060315-1060540:-1:exon
so has part: feature:1051706-1051750:-1:exon
so has part: feature:1040145-1040246:-1:exon
so has part: feature:1020037-1020168:-1:exon
so has part: feature:1019331-1019404:-1:exon
so has part: feature:1018818-1018885:-1:exon
so has part: feature:1012110-1012174:-1:exon
so has part: feature:1011658-1011757:-1:exon
so has part: feature:1009410-1009475:-1:exon
so has part: feature:1009155-1009196:-1:exon
so has part: feature:1008037-1008145:-1:exon
so has part: feature:1006074-1006141:-1:exon
so has part: feature:1003539-1003598:-1:exon
so has part: feature:1000558-1000719:-1:exon
so has part: feature:986429-986520:-1:exon
so has part: feature:984800-984923:-1:exon
so has part: feature:978746-978848:-1:exon
so has part: feature:973048-973165:-1:exon
so has part: feature:969304-969429:-1:exon
so has part: feature:961160-961335:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1060315-1060540:-1:exon

position:1060315:-1
position: 1060315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1051706-1051750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1040145-1040246:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1020037-1020168:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1019331-1019404:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1018818-1018885:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1012110-1012174:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1011658-1011757:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1009410-1009475:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1009155-1009196:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1008037-1008145:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1006074-1006141:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1003539-1003598:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1000558-1000719:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:986429-986520:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:984800-984923:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:978746-978848:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:973048-973165:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:969304-969429:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:961160-961335:-1:exon

LOC116957600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957600
product: tetratricopeptide repeat protein 39A-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032979846.1
SIO_010081: LOC116957600
subclass of: SO_0000673
so part of: LOC116957600
location: complement(join(961161..961335,969304..969429,973048..973165,978746..978848,984800..984923,986429..986520,1000558..1000719,1003539..1003598,1006074..1006141,1008037..1008145,1009410..1009475,1011658..1011757,1012110..1012174,1018818..1018885,1019331..1019404,1020037..1020168,1040145..1040246,1051706..1051750,1060315..1060538))
location: region:961161-1060538:-1
so has part: feature:1060315-1060538:-1:exon
so has part: feature:1051706-1051750:-1:exon
so has part: feature:1040145-1040246:-1:exon
so has part: feature:1020037-1020168:-1:exon
so has part: feature:1019331-1019404:-1:exon
so has part: feature:1018818-1018885:-1:exon
so has part: feature:1012110-1012174:-1:exon
so has part: feature:1011658-1011757:-1:exon
so has part: feature:1009410-1009475:-1:exon
so has part: feature:1008037-1008145:-1:exon
so has part: feature:1006074-1006141:-1:exon
so has part: feature:1003539-1003598:-1:exon
so has part: feature:1000558-1000719:-1:exon
so has part: feature:986429-986520:-1:exon
so has part: feature:984800-984923:-1:exon
so has part: feature:978746-978848:-1:exon
so has part: feature:973048-973165:-1:exon
so has part: feature:969304-969429:-1:exon
so has part: feature:961161-961335:-1:exon

position:961161:-1
position: 961161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060538:-1
position: 1060538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1060315-1060538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1051706-1051750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1040145-1040246:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1020037-1020168:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1019331-1019404:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1018818-1018885:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1012110-1012174:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1011658-1011757:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1009410-1009475:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1008037-1008145:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1006074-1006141:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1003539-1003598:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1000558-1000719:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:986429-986520:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:984800-984923:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:978746-978848:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:973048-973165:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:969304-969429:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:961161-961335:-1:exon

LOC116957600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957600
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 39A-like isoform X2
translation: MAEKDVNGPPVSLSESTRLCSVALDLFFSNHFTEAADALKPSVSTSMYHALVFGTITNMQAMLTFDPVNMDSANRALKQALDVCARFRRKSSVVDSISSLVSRTDEQLTEEELHAEICFAECLLQKACLTFIQDENMINFIKGGIKVRQSYNIYKECQQMLALPCVMAGENVSEFEGGVHLGTGTFNLILSMVPTRILKLLEFIGFSGNKEVALSQLREGAVGMTLRSCLCAMGLLCYHTFISFVLGTGEGDVTEAEEILRPYLQRYPNGAIFLFFAGRIEEIKGNIPEAMMKLQECVSSQSLWPQFHHMCYWELMWCLTFRMQWLEAFHYADLLAQQNNWSRATYVYMKAAFLTMASPAEKRMVRESEEDLYRQVSTLRQKLAGKSLPTEKFAVRKARRYQSTRSTHGLVLPALEMMYMWNGFTIVGREPALTTSMLTLITDTEESLTGGGEYAVDDTCLLLLLKGVCLKHLGRLSEAEEAFIQIHAQEKRLRHDQYLAPNAMFELGFLLMEHGGDERRSEARRLLENARTNYKKYSLESRLHFRIHAALNALKRRDEGDRTS
SIO_010081: LOC116957600
subclass of: SO_0000673
so part of: LOC116957600
location: complement(join(961233..961335,969304..969429,973048..973165,978746..978848,984800..984923,986429..986520,1000558..1000719,1003539..1003598,1006074..1006141,1008037..1008145,1009410..1009475,1011658..1011757,1012110..1012174,1018818..1018885,1019331..1019404,1020037..1020168,1040145..1040246,1051706..1051728))
location: region:961233-1051728:-1
so has part: feature:1051706-1051728:-1:exon
so has part: feature:1040145-1040246:-1:exon
so has part: feature:1020037-1020168:-1:exon
so has part: feature:1019331-1019404:-1:exon
so has part: feature:1018818-1018885:-1:exon
so has part: feature:1012110-1012174:-1:exon
so has part: feature:1011658-1011757:-1:exon
so has part: feature:1009410-1009475:-1:exon
so has part: feature:1008037-1008145:-1:exon
so has part: feature:1006074-1006141:-1:exon
so has part: feature:1003539-1003598:-1:exon
so has part: feature:1000558-1000719:-1:exon
so has part: feature:986429-986520:-1:exon
so has part: feature:984800-984923:-1:exon
so has part: feature:978746-978848:-1:exon
so has part: feature:973048-973165:-1:exon
so has part: feature:969304-969429:-1:exon
so has part: feature:961233-961335:-1:exon

XP_032835737.1
type: Protein
SIO_000068: ncbiprotein

position:961233:-1
position: 961233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051728:-1
position: 1051728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051706-1051728:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1040145-1040246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1020037-1020168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1019331-1019404:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1018818-1018885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1012110-1012174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1011658-1011757:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1009410-1009475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1008037-1008145:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1006074-1006141:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1003539-1003598:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1000558-1000719:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:986429-986520:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:984800-984923:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:978746-978848:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:973048-973165:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:969304-969429:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:961233-961335:-1:exon

LOC116957600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957600
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 39A-like isoform X1
translation: MAEKDVNGPPVSLSESTRLCSVALDLFFSNHFTEAADALKPSVSTSMYHALVFGTITNMQAMLTFDPVNMDSANRALKQALDVCARFRRKSSVVDSISSLVSRTDEQLTEEELHAEICFAECLLQKACLTFIQDENMINFIKGGIKVRQSYNIYKECQQMLALPCVMAGENVSEFEGGVHLGTGTFNLILSMVPTRILKLLEFIGFSGNKGVPELHGTNRLPLQEVALSQLREGAVGMTLRSCLCAMGLLCYHTFISFVLGTGEGDVTEAEEILRPYLQRYPNGAIFLFFAGRIEEIKGNIPEAMMKLQECVSSQSLWPQFHHMCYWELMWCLTFRMQWLEAFHYADLLAQQNNWSRATYVYMKAAFLTMASPAEKRMVRESEEDLYRQVSTLRQKLAGKSLPTEKFAVRKARRYQSTRSTHGLVLPALEMMYMWNGFTIVGREPALTTSMLTLITDTEESLTGGGEYAVDDTCLLLLLKGVCLKHLGRLSEAEEAFIQIHAQEKRLRHDQYLAPNAMFELGFLLMEHGGDERRSEARRLLENARTNYKKYSLESRLHFRIHAALNALKRRDEGDRTS
SIO_010081: LOC116957600
subclass of: SO_0000673
so part of: LOC116957600
location: complement(join(961233..961335,969304..969429,973048..973165,978746..978848,984800..984923,986429..986520,1000558..1000719,1003539..1003598,1006074..1006141,1008037..1008145,1009155..1009196,1009410..1009475,1011658..1011757,1012110..1012174,1018818..1018885,1019331..1019404,1020037..1020168,1040145..1040246,1051706..1051728))
location: region:961233-1051728:-1
so has part: feature:1051706-1051728:-1:exon
so has part: feature:1040145-1040246:-1:exon
so has part: feature:1020037-1020168:-1:exon
so has part: feature:1019331-1019404:-1:exon
so has part: feature:1018818-1018885:-1:exon
so has part: feature:1012110-1012174:-1:exon
so has part: feature:1011658-1011757:-1:exon
so has part: feature:1009410-1009475:-1:exon
so has part: feature:1009155-1009196:-1:exon
so has part: feature:1008037-1008145:-1:exon
so has part: feature:1006074-1006141:-1:exon
so has part: feature:1003539-1003598:-1:exon
so has part: feature:1000558-1000719:-1:exon
so has part: feature:986429-986520:-1:exon
so has part: feature:984800-984923:-1:exon
so has part: feature:978746-978848:-1:exon
so has part: feature:973048-973165:-1:exon
so has part: feature:969304-969429:-1:exon
so has part: feature:961233-961335:-1:exon

XP_032835735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1051706-1051728:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1040145-1040246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1020037-1020168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1019331-1019404:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1018818-1018885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1012110-1012174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1011658-1011757:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1009410-1009475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1009155-1009196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1008037-1008145:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1006074-1006141:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1003539-1003598:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1000558-1000719:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:986429-986520:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:984800-984923:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:978746-978848:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:973048-973165:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:969304-969429:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:961233-961335:-1:exon

LOC116957600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957600
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 39A-like isoform X1
translation: MAEKDVNGPPVSLSESTRLCSVALDLFFSNHFTEAADALKPSVSTSMYHALVFGTITNMQAMLTFDPVNMDSANRALKQALDVCARFRRKSSVVDSISSLVSRTDEQLTEEELHAEICFAECLLQKACLTFIQDENMINFIKGGIKVRQSYNIYKECQQMLALPCVMAGENVSEFEGGVHLGTGTFNLILSMVPTRILKLLEFIGFSGNKGVPELHGTNRLPLQEVALSQLREGAVGMTLRSCLCAMGLLCYHTFISFVLGTGEGDVTEAEEILRPYLQRYPNGAIFLFFAGRIEEIKGNIPEAMMKLQECVSSQSLWPQFHHMCYWELMWCLTFRMQWLEAFHYADLLAQQNNWSRATYVYMKAAFLTMASPAEKRMVRESEEDLYRQVSTLRQKLAGKSLPTEKFAVRKARRYQSTRSTHGLVLPALEMMYMWNGFTIVGREPALTTSMLTLITDTEESLTGGGEYAVDDTCLLLLLKGVCLKHLGRLSEAEEAFIQIHAQEKRLRHDQYLAPNAMFELGFLLMEHGGDERRSEARRLLENARTNYKKYSLESRLHFRIHAALNALKRRDEGDRTS
SIO_010081: LOC116957600
subclass of: SO_0000673
so part of: LOC116957600
location: complement(join(961233..961335,969304..969429,973048..973165,978746..978848,984800..984923,986429..986520,1000558..1000719,1003539..1003598,1006074..1006141,1008037..1008145,1009155..1009196,1009410..1009475,1011658..1011757,1012110..1012174,1018818..1018885,1019331..1019404,1020037..1020168,1040145..1040246,1051706..1051728))
location: region:961233-1051728:-1
so has part: feature:1051706-1051728:-1:exon
so has part: feature:1040145-1040246:-1:exon
so has part: feature:1020037-1020168:-1:exon
so has part: feature:1019331-1019404:-1:exon
so has part: feature:1018818-1018885:-1:exon
so has part: feature:1012110-1012174:-1:exon
so has part: feature:1011658-1011757:-1:exon
so has part: feature:1009410-1009475:-1:exon
so has part: feature:1009155-1009196:-1:exon
so has part: feature:1008037-1008145:-1:exon
so has part: feature:1006074-1006141:-1:exon
so has part: feature:1003539-1003598:-1:exon
so has part: feature:1000558-1000719:-1:exon
so has part: feature:986429-986520:-1:exon
so has part: feature:984800-984923:-1:exon
so has part: feature:978746-978848:-1:exon
so has part: feature:973048-973165:-1:exon
so has part: feature:969304-969429:-1:exon
so has part: feature:961233-961335:-1:exon

XP_032835736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1051706-1051728:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1040145-1040246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1020037-1020168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1019331-1019404:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1018818-1018885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1012110-1012174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1011658-1011757:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1009410-1009475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1009155-1009196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1008037-1008145:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1006074-1006141:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1003539-1003598:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1000558-1000719:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:986429-986520:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:984800-984923:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:978746-978848:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:973048-973165:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:969304-969429:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:961233-961335:-1:exon

LOC116957596
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1091210..1125549)
location: region:1091210-1125549:-1
so has part: feature:1091210-1125549:-1:exon
subclass of: SO_0000010

116957596
type: Gene
SIO_000068: ncbigene

position:1091210:-1
position: 1091210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125549:-1
position: 1125549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1091210-1125549:-1:exon

LOC116957596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957596
product: UV excision repair protein RAD23 homolog B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_032979838.1
SIO_010081: LOC116957596
subclass of: SO_0000673
so part of: LOC116957596
location: complement(join(1091210..1092325,1092638..1092832,1096877..1097010,1100228..1100471,1103305..1103432,1105632..1105678,1105937..1106271,1109088..1109167,1114673..1114754,1125212..1125549))
location: region:1091210-1125549:-1
so has part: feature:1125212-1125549:-1:exon
so has part: feature:1114673-1114754:-1:exon
so has part: feature:1109088-1109167:-1:exon
so has part: feature:1105937-1106271:-1:exon
so has part: feature:1105632-1105678:-1:exon
so has part: feature:1103305-1103432:-1:exon
so has part: feature:1100228-1100471:-1:exon
so has part: feature:1096877-1097010:-1:exon
so has part: feature:1092638-1092832:-1:exon
so has part: feature:1091210-1092325:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125212-1125549:-1:exon

position:1125212:-1
position: 1125212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1114673-1114754:-1:exon

position:1114673:-1
position: 1114673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114754:-1
position: 1114754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1109088-1109167:-1:exon

position:1109088:-1
position: 1109088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109167:-1
position: 1109167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1105937-1106271:-1:exon

position:1105937:-1
position: 1105937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106271:-1
position: 1106271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1105632-1105678:-1:exon

position:1105632:-1
position: 1105632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105678:-1
position: 1105678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1103305-1103432:-1:exon

position:1103305:-1
position: 1103305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103432:-1
position: 1103432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1100228-1100471:-1:exon

position:1100228:-1
position: 1100228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100471:-1
position: 1100471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1096877-1097010:-1:exon

position:1096877:-1
position: 1096877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097010:-1
position: 1097010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1092638-1092832:-1:exon

position:1092638:-1
position: 1092638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092832:-1
position: 1092832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1091210-1092325:-1:exon

position:1092325:-1
position: 1092325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UV excision repair protein RAD23 homolog B-like
translation: MIVTLKTLQQQTFRVEIEGTRTVRELKVRIEEERGSEAFPADSQKLIYAGKILSDESAVCDYNIDEKSFVVVMVTKPKPAPPPIPPAPTEAPPPIPPAPATTPATTPPATPTPGPATPTTPMQGQATPTVATSTSNPATPSATLEEKEAGPEVVEATPTGEGPGVTETTPPGEEATPTAEEEQEVAASDIGNQNLAKEAASALVTGQAYEQMVQEMVSMGYERSKVVSALRASYNNPDRAVEYLLTGIPGSSGSAPESVHAGAPSLTVDVPTDPTTTSSTSTTTTTTSSSTTSSTPSTTTTTTTSSTSTPAAAAAASQPSPQRRQNTAASNPLEFLRSQPQFQQMRVVLQQNPSLLPALLQQLGRENPQLLQQISQHQEQFISMLNSPSEGGGGDGDDGDDGDDGGDGDGLGGAAGSGGGGVNYIQVTPQEKAAIERLKDLGFPEGLVVQAYFACEKNENMAANFLLQQQGDGDD
SIO_010081: LOC116957596
subclass of: SO_0000673
so part of: LOC116957596
location: complement(join(1092209..1092325,1092638..1092832,1096877..1097010,1100228..1100471,1103305..1103432,1105632..1105678,1105937..1106271,1109088..1109167,1114673..1114754,1125212..1125277))
location: region:1092209-1125277:-1
so has part: feature:1125212-1125277:-1:exon
so has part: feature:1114673-1114754:-1:exon
so has part: feature:1109088-1109167:-1:exon
so has part: feature:1105937-1106271:-1:exon
so has part: feature:1105632-1105678:-1:exon
so has part: feature:1103305-1103432:-1:exon
so has part: feature:1100228-1100471:-1:exon
so has part: feature:1096877-1097010:-1:exon
so has part: feature:1092638-1092832:-1:exon
so has part: feature:1092209-1092325:-1:exon

XP_032835729.1
type: Protein
SIO_000068: ncbiprotein

position:1092209:-1
position: 1092209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125277:-1
position: 1125277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1125212-1125277:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1114673-1114754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1109088-1109167:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1105937-1106271:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1105632-1105678:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1103305-1103432:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1100228-1100471:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1096877-1097010:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1092638-1092832:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1092209-1092325:-1:exon

LOC116957598
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957598
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1125554..1245409)
location: region:1125554-1245409:-1
so has part: feature:1125554-1245409:-1:exon
subclass of: SO_0000010

116957598
type: Gene
SIO_000068: ncbigene

position:1125554:-1
position: 1125554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1245409:-1
position: 1245409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1125554-1245409:-1:exon

LOC116957598
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957598
product: uncharacterized LOC116957598
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032979841.1
SIO_010081: LOC116957598
subclass of: SO_0000673
so part of: LOC116957598
location: complement(join(1125554..1125678,1145415..1145649,1146291..1146623,1151017..1151225,1152153..1152540,1156248..1156304,1163595..1163716,1168306..1168799,1170764..1170856,1171747..1172060,1172160..1172244,1177195..1177291,1179078..1179235,1179857..1179979,1184549..1185877,1191979..1192241,1192665..1193358,1198686..1200184,1201171..1203063,1216645..1217937,1218019..1218258,1220182..1220415,1224428..1224598,1227725..1228055,1244898..1245409))
location: region:1125554-1245409:-1
so has part: feature:1244898-1245409:-1:exon
so has part: feature:1227725-1228055:-1:exon
so has part: feature:1224428-1224598:-1:exon
so has part: feature:1220182-1220415:-1:exon
so has part: feature:1218019-1218258:-1:exon
so has part: feature:1216645-1217937:-1:exon
so has part: feature:1201171-1203063:-1:exon
so has part: feature:1198686-1200184:-1:exon
so has part: feature:1192665-1193358:-1:exon
so has part: feature:1191979-1192241:-1:exon
so has part: feature:1184549-1185877:-1:exon
so has part: feature:1179857-1179979:-1:exon
so has part: feature:1179078-1179235:-1:exon
so has part: feature:1177195-1177291:-1:exon
so has part: feature:1172160-1172244:-1:exon
so has part: feature:1171747-1172060:-1:exon
so has part: feature:1170764-1170856:-1:exon
so has part: feature:1168306-1168799:-1:exon
so has part: feature:1163595-1163716:-1:exon
so has part: feature:1156248-1156304:-1:exon
so has part: feature:1152153-1152540:-1:exon
so has part: feature:1151017-1151225:-1:exon
so has part: feature:1146291-1146623:-1:exon
so has part: feature:1145415-1145649:-1:exon
so has part: feature:1125554-1125678:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1244898-1245409:-1:exon

position:1244898:-1
position: 1244898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1227725-1228055:-1:exon

position:1227725:-1
position: 1227725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1228055:-1
position: 1228055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1224428-1224598:-1:exon

position:1224428:-1
position: 1224428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1224598:-1
position: 1224598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1220182-1220415:-1:exon

position:1220182:-1
position: 1220182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1220415:-1
position: 1220415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1218019-1218258:-1:exon

position:1218019:-1
position: 1218019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218258:-1
position: 1218258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1216645-1217937:-1:exon

position:1216645:-1
position: 1216645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217937:-1
position: 1217937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1201171-1203063:-1:exon

position:1201171:-1
position: 1201171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203063:-1
position: 1203063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1198686-1200184:-1:exon

position:1198686:-1
position: 1198686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200184:-1
position: 1200184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1192665-1193358:-1:exon

position:1192665:-1
position: 1192665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193358:-1
position: 1193358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1191979-1192241:-1:exon

position:1191979:-1
position: 1191979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1192241:-1
position: 1192241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1184549-1185877:-1:exon

position:1184549:-1
position: 1184549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185877:-1
position: 1185877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1179857-1179979:-1:exon

position:1179857:-1
position: 1179857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179979:-1
position: 1179979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1179078-1179235:-1:exon

position:1179078:-1
position: 1179078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179235:-1
position: 1179235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1177195-1177291:-1:exon

position:1177195:-1
position: 1177195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177291:-1
position: 1177291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1172160-1172244:-1:exon

position:1172160:-1
position: 1172160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172244:-1
position: 1172244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1171747-1172060:-1:exon

position:1171747:-1
position: 1171747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172060:-1
position: 1172060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1170764-1170856:-1:exon

position:1170764:-1
position: 1170764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170856:-1
position: 1170856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1168306-1168799:-1:exon

position:1168306:-1
position: 1168306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168799:-1
position: 1168799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1163595-1163716:-1:exon

position:1163595:-1
position: 1163595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163716:-1
position: 1163716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1156248-1156304:-1:exon

position:1156248:-1
position: 1156248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156304:-1
position: 1156304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1152153-1152540:-1:exon

position:1152153:-1
position: 1152153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152540:-1
position: 1152540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1151017-1151225:-1:exon

position:1151017:-1
position: 1151017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151225:-1
position: 1151225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1146291-1146623:-1:exon

position:1146291:-1
position: 1146291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146623:-1
position: 1146623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1145415-1145649:-1:exon

position:1145415:-1
position: 1145415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145649:-1
position: 1145649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1125554-1125678:-1:exon

position:1125678:-1
position: 1125678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957598
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957598
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: uncharacterized protein LOC116957598
translation: MLDDDPSCDLSHDPTSSSTTTTSSSARSTRSSQEVTSQRPRGQEVTSQLRRSQEVTSHRRGKEVTSQLRGQEVTPQRRQGQEVAFLAGREAEGEGEEPCFYETVEGGVRLFRCRLCAYSSPRRSYLPTHNLTHTQQNPFSCSLCPYECKSKQQLDTHAMKHSGLRPFKCPHCEYATFARSHLRQHLARFHHHHPSPSPPLLTLSRRGGARRARSRGGGGGAGGGAGESLALLQHGRARGHGVGGGMSPPLAPQPPRLPPRVLCCSRCPYRTSRRDRLLLHQTRRHGNHHDHPATITTAAATTTTTNNDSKSSGGDLGGKFRGGGGGGGGGGGGGSSLLRAALTAVPSAASSSSSSSPLRINLGSLLKGRRAPSMGRGSRTRSRPPPPLPPATTATTTARRRRRRTSLEEVEGDPEDAEGDLGDPEEAGALDDLEKAEEAQEDLEGDEEAHGDRGDLGENPHGELGEADHFKSPGHPAAVTSEPLNGDSGTAALSTTTAALSADAADSDRCSSAASAASAASAASAASAGPASPPPPPPPPPQPPPPQPPAALGGRKVPPLRQAKSRASFSRPSPFPPQAAEGPAFRRAAGGHYQCLQCPFLTAHRRSISRHVLNIHTGGARRQSGGGGGGGGRRSRGGKDAGPDFGTPGSRPAQGFSCQRCDFRCATAYSFVLHVQAHRGSGGGAGSGATGDVGAGAAGAAGAAGAAGAAGAAGPGAPADVGADDAAGGRRKAPARRLRCACCDYRSHSVKGLRVHQQLKHGLCDFTKGLLYDEVEEEEEEEGEAAGRGRRRLRGSADAANRPSPSSSSSGGNNNNNNNGATTTTTTTTTTTAARGAQAIPYPEPGEICTDGDRVHIHLDGEGFDDDVEDDDEDDEEDDDEDEDEEDDDEYGEVEDGEVEDGEVLDGEVEDGEVEDGEVEDGEGELSCYVDAAAPGRRRKSPSGVVSRLPPPPPPPPPPPPPPPPPPPCHAEPPGGTTAAAATPLDAAATTEPPDASPWGAHSATARHHHHHHHRHHDAHHPAQRKRPRIDEIASSLHTRIQRRHVLLASPSSSPQPSSPPYSSSSSSSSSSRYHHRQHGYGGYGGSGGGDVGRRTRKRSRKGGGVTCGDDDDDDDDDDDDGGDDDGYDDGYDDGGDDDDGRWWHDEDGGGDDDGNNDDDDDDDGSPYRRQQQQQSNNSGRSFGGGVPRPSPASSSTGSTTTTTTTAATAATTATAATTFRCKHCEYHSATARGVSTHYQRMHPYVKFNFRYILDPLDRSETYRCLECPHESPALPALKRHYSRRHPQALYVHSLERPGRSLYRCVACPYTNANVRGMMPHYQRMHPGVAVTNALIFSSFVRLPDDGGGGGDGDGGGDGDDGGGGGGGGGDGDGDAASPVGRGGGGGGGGVGDHGGVAGGKSRGHGGPSPAPGRWQSPSPDATATAATAATAAGPPQPPPRPTTAYQCDLCTYTHLNIHSVLIHYQRGHRDVKASYSRIRKVALGPDGVPRAPTLARPATNSPPSSSSAGAAASAAASPAAAAAAAAAAHAAVAPGDLLYFCRHCTYSHRSVESVLAHYRQSHPDVVVTAGYIRRGYSLLPRPTTGGTGGTGAGTAADASGGQHGALQPLGARVKVGGLEKAEPADPLALFYCRVCPYDNRTLKGVLVHYQKRHGEVKITGLAVREHTEVVRRRILLMQQQQQQQDGNQNQPRKKMMEFHDGNRQQQQHPKMELDDGNLLKQHHQQQQQHHQQGMLSSPWPQPLYPLSEKGKEMMMMMVVGGGGGGGGGGGGGSSSSSGGARLGAPVVSASAALEAASAAPCAPVMAAVMGGGGEGGATRVKRGSGGGGGGGGVGAGGGGAASRAEARALRLAPPALWCRFCDRRERYILDLRRHYEEAHPKVAVTSGTLLAWASQDGQVSPGYHCELCGFRHSLAKGLYAHYQHGHRSHAINYQYVLTQLCVRPPDDAAAAPPPPPPTGTRRGSRTEQDEEEEELQKTKEEEVREEEEVGEGGSSLHAC…
SIO_010081: LOC116957598
subclass of: SO_0000673
so part of: LOC116957598
location: complement(join(1125554..1125678,1145415..1145649,1146291..1146623,1151017..1151225,1152153..1152540,1156248..1156304,1163595..1163716,1168306..1168799,1170764..1170856,1171747..1172060,1172160..1172244,1177195..1177291,1179078..1179235,1179857..1179979,1184549..1185877,1191979..1192241,1192665..1193358,1198686..1200184,1201171..1203063,1216645..1217937,1218019..1218258,1220182..1220415,1224428..1224598,1227725..1228040))
location: region:1125554-1228040:-1
so has part: feature:1227725-1228040:-1:exon
so has part: feature:1224428-1224598:-1:exon
so has part: feature:1220182-1220415:-1:exon
so has part: feature:1218019-1218258:-1:exon
so has part: feature:1216645-1217937:-1:exon
so has part: feature:1201171-1203063:-1:exon
so has part: feature:1198686-1200184:-1:exon
so has part: feature:1192665-1193358:-1:exon
so has part: feature:1191979-1192241:-1:exon
so has part: feature:1184549-1185877:-1:exon
so has part: feature:1179857-1179979:-1:exon
so has part: feature:1179078-1179235:-1:exon
so has part: feature:1177195-1177291:-1:exon
so has part: feature:1172160-1172244:-1:exon
so has part: feature:1171747-1172060:-1:exon
so has part: feature:1170764-1170856:-1:exon
so has part: feature:1168306-1168799:-1:exon
so has part: feature:1163595-1163716:-1:exon
so has part: feature:1156248-1156304:-1:exon
so has part: feature:1152153-1152540:-1:exon
so has part: feature:1151017-1151225:-1:exon
so has part: feature:1146291-1146623:-1:exon
so has part: feature:1145415-1145649:-1:exon
so has part: feature:1125554-1125678:-1:exon

XP_032835732.1
type: Protein
SIO_000068: ncbiprotein

position:1228040:-1
position: 1228040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1227725-1228040:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1224428-1224598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1220182-1220415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1218019-1218258:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1216645-1217937:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1201171-1203063:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1198686-1200184:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1192665-1193358:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1191979-1192241:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184549-1185877:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1179857-1179979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1179078-1179235:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1177195-1177291:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1172160-1172244:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1171747-1172060:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1170764-1170856:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1168306-1168799:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1163595-1163716:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1156248-1156304:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1152153-1152540:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1151017-1151225:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1146291-1146623:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1145415-1145649:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1125554-1125678:-1:exon

LOC116957599
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957599
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1278477..1294310)
location: region:1278477-1294310:-1
so has part: feature:1278477-1294310:-1:exon
subclass of: SO_0000010

116957599
type: Gene
SIO_000068: ncbigene

position:1278477:-1
position: 1278477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1294310:-1
position: 1294310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1278477-1294310:-1:exon

LOC116957599
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957599
product: protein lyl-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032979842.1
SIO_010081: LOC116957599
subclass of: SO_0000673
so part of: LOC116957599
location: complement(join(1278477..1278968,1280738..1280826,1287293..1287405,1294182..1294310))
location: region:1278477-1294310:-1
so has part: feature:1294182-1294310:-1:exon
so has part: feature:1287293-1287405:-1:exon
so has part: feature:1280738-1280826:-1:exon
so has part: feature:1278477-1278968:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294182-1294310:-1:exon

position:1294182:-1
position: 1294182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1287293-1287405:-1:exon

position:1287293:-1
position: 1287293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287405:-1
position: 1287405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1280738-1280826:-1:exon

position:1280738:-1
position: 1280738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280826:-1
position: 1280826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1278477-1278968:-1:exon

position:1278968:-1
position: 1278968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957599
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957599
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lyl-1-like
translation: MEENEEDVEKDIGNDLEVEEEVPDGEVVPLDLTPRDGGDGGGDAVCVPVIDLGLCGAKGGGHGPHPLLIPFGPPPLMGPYGAFVVSAGFPSAQHARLKRRPLPFDYEIGETGSPQKLVRRIFTNSRERWRQQNVNGAFSELRRLLPTHPPDRKLSKNEILRLAMRYIDFLVALLRDQSTTSSTSSTTTSSTSSSTSSSTSSSSSSSTINAVAAAAALVASSTTSWRGDVAGGGGGGRAGDMTVGTGSP
SIO_010081: LOC116957599
subclass of: SO_0000673
so part of: LOC116957599
location: complement(join(1278553..1278968,1280738..1280826,1287293..1287405,1294182..1294310))
location: region:1278553-1294310:-1
so has part: feature:1294182-1294310:-1:exon
so has part: feature:1287293-1287405:-1:exon
so has part: feature:1280738-1280826:-1:exon
so has part: feature:1278553-1278968:-1:exon

XP_032835733.1
type: Protein
SIO_000068: ncbiprotein

position:1278553:-1
position: 1278553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294182-1294310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287293-1287405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280738-1280826:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1278553-1278968:-1:exon

LOC116957604
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1294379..1323625)
location: region:1294379-1323625:-1
so has part: feature:1294379-1323625:-1:exon
subclass of: SO_0000011

116957604
type: Gene
SIO_000068: ncbigene

position:1294379:-1
position: 1294379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1323625:-1
position: 1323625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294379-1323625:-1:exon

LOC116957604
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957604
product: uncharacterized LOC116957604
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_004405209.1
SIO_010081: LOC116957604
subclass of: SO_0000673
so part of: LOC116957604
location: complement(join(1294379..1294547,1297001..1297104,1323413..1323625))
location: region:1294379-1323625:-1
so has part: feature:1323413-1323625:-1:exon
so has part: feature:1297001-1297104:-1:exon
so has part: feature:1294379-1294547:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1323413-1323625:-1:exon

position:1323413:-1
position: 1323413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1297001-1297104:-1:exon

position:1297001:-1
position: 1297001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1297104:-1
position: 1297104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1294379-1294547:-1:exon

position:1294547:-1
position: 1294547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957594
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957594
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1354748..1441364)
location: region:1354748-1441364:-1
so has part: feature:1354748-1441364:-1:exon
subclass of: SO_0000010

116957594
type: Gene
SIO_000068: ncbigene

position:1354748:-1
position: 1354748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441364:-1
position: 1441364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1354748-1441364:-1:exon

LOC116957594
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957594
product: coiled-coil and C2 domain-containing protein 1A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_032979835.1
SIO_010081: LOC116957594
subclass of: SO_0000673
so part of: LOC116957594
location: complement(join(1354748..1355371,1355788..1355835,1356279..1356355,1357861..1357987,1368067..1368130,1374531..1374562,1376425..1376562,1384008..1384092,1387682..1387781,1389697..1389748,1393174..1393232,1399157..1399230,1400475..1400591,1404600..1404658,1406455..1406580,1411246..1411430,1413385..1413448,1418939..1419141,1419257..1419329,1421456..1421568,1421869..1421943,1425376..1425490,1430720..1430832,1432348..1432744,1432899..1433009,1433519..1433614,1434163..1434281,1440550..1440691,1441015..1441364))
location: region:1354748-1441364:-1
so has part: feature:1441015-1441364:-1:exon
so has part: feature:1440550-1440691:-1:exon
so has part: feature:1434163-1434281:-1:exon
so has part: feature:1433519-1433614:-1:exon
so has part: feature:1432899-1433009:-1:exon
so has part: feature:1432348-1432744:-1:exon
so has part: feature:1430720-1430832:-1:exon
so has part: feature:1425376-1425490:-1:exon
so has part: feature:1421869-1421943:-1:exon
so has part: feature:1421456-1421568:-1:exon
so has part: feature:1419257-1419329:-1:exon
so has part: feature:1418939-1419141:-1:exon
so has part: feature:1413385-1413448:-1:exon
so has part: feature:1411246-1411430:-1:exon
so has part: feature:1406455-1406580:-1:exon
so has part: feature:1404600-1404658:-1:exon
so has part: feature:1400475-1400591:-1:exon
so has part: feature:1399157-1399230:-1:exon
so has part: feature:1393174-1393232:-1:exon
so has part: feature:1389697-1389748:-1:exon
so has part: feature:1387682-1387781:-1:exon
so has part: feature:1384008-1384092:-1:exon
so has part: feature:1376425-1376562:-1:exon
so has part: feature:1374531-1374562:-1:exon
so has part: feature:1368067-1368130:-1:exon
so has part: feature:1357861-1357987:-1:exon
so has part: feature:1356279-1356355:-1:exon
so has part: feature:1355788-1355835:-1:exon
so has part: feature:1354748-1355371:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1441015-1441364:-1:exon

position:1441015:-1
position: 1441015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1440550-1440691:-1:exon

position:1440550:-1
position: 1440550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1440691:-1
position: 1440691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1434163-1434281:-1:exon

position:1434163:-1
position: 1434163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1434281:-1
position: 1434281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1433519-1433614:-1:exon

position:1433519:-1
position: 1433519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1433614:-1
position: 1433614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1432899-1433009:-1:exon

position:1432899:-1
position: 1432899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1433009:-1
position: 1433009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1432348-1432744:-1:exon

position:1432348:-1
position: 1432348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1432744:-1
position: 1432744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1430720-1430832:-1:exon

position:1430720:-1
position: 1430720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430832:-1
position: 1430832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1425376-1425490:-1:exon

position:1425376:-1
position: 1425376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1425490:-1
position: 1425490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1421869-1421943:-1:exon

position:1421869:-1
position: 1421869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421943:-1
position: 1421943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1421456-1421568:-1:exon

position:1421456:-1
position: 1421456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421568:-1
position: 1421568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1419257-1419329:-1:exon

position:1419257:-1
position: 1419257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1419329:-1
position: 1419329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1418939-1419141:-1:exon

position:1418939:-1
position: 1418939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1419141:-1
position: 1419141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1413385-1413448:-1:exon

position:1413385:-1
position: 1413385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1413448:-1
position: 1413448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1411246-1411430:-1:exon

position:1411246:-1
position: 1411246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1411430:-1
position: 1411430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1406455-1406580:-1:exon

position:1406455:-1
position: 1406455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1406580:-1
position: 1406580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1404600-1404658:-1:exon

position:1404600:-1
position: 1404600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404658:-1
position: 1404658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1400475-1400591:-1:exon

position:1400475:-1
position: 1400475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1400591:-1
position: 1400591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1399157-1399230:-1:exon

position:1399157:-1
position: 1399157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1399230:-1
position: 1399230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1393174-1393232:-1:exon

position:1393174:-1
position: 1393174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1393232:-1
position: 1393232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1389697-1389748:-1:exon

position:1389697:-1
position: 1389697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389748:-1
position: 1389748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1387682-1387781:-1:exon

position:1387682:-1
position: 1387682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1387781:-1
position: 1387781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1384008-1384092:-1:exon

position:1384008:-1
position: 1384008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1384092:-1
position: 1384092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1376425-1376562:-1:exon

position:1376425:-1
position: 1376425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1376562:-1
position: 1376562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1374531-1374562:-1:exon

position:1374531:-1
position: 1374531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1374562:-1
position: 1374562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1368067-1368130:-1:exon

position:1368067:-1
position: 1368067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368130:-1
position: 1368130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1357861-1357987:-1:exon

position:1357861:-1
position: 1357861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1357987:-1
position: 1357987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1356279-1356355:-1:exon

position:1356279:-1
position: 1356279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1356355:-1
position: 1356355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1355788-1355835:-1:exon

position:1355788:-1
position: 1355788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355835:-1
position: 1355835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1354748-1355371:-1:exon

position:1355371:-1
position: 1355371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957594
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957594
product: coiled-coil and C2 domain-containing protein 1A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_032979834.1
SIO_010081: LOC116957594
subclass of: SO_0000673
so part of: LOC116957594
location: complement(join(1354748..1355371,1355788..1355835,1356279..1356355,1357861..1357987,1368067..1368130,1374531..1374562,1376425..1376562,1384008..1384092,1387682..1387781,1389697..1389748,1393174..1393232,1399157..1399230,1400475..1400591,1404600..1404658,1406455..1406580,1411246..1411430,1413385..1413448,1418939..1419141,1419257..1419329,1421456..1421568,1421869..1421943,1425376..1425490,1430720..1430832,1432348..1432744,1432899..1433009,1433519..1433614,1434163..1434281,1440547..1440691,1441015..1441363))
location: region:1354748-1441363:-1
so has part: feature:1441015-1441363:-1:exon
so has part: feature:1440547-1440691:-1:exon
so has part: feature:1434163-1434281:-1:exon
so has part: feature:1433519-1433614:-1:exon
so has part: feature:1432899-1433009:-1:exon
so has part: feature:1432348-1432744:-1:exon
so has part: feature:1430720-1430832:-1:exon
so has part: feature:1425376-1425490:-1:exon
so has part: feature:1421869-1421943:-1:exon
so has part: feature:1421456-1421568:-1:exon
so has part: feature:1419257-1419329:-1:exon
so has part: feature:1418939-1419141:-1:exon
so has part: feature:1413385-1413448:-1:exon
so has part: feature:1411246-1411430:-1:exon
so has part: feature:1406455-1406580:-1:exon
so has part: feature:1404600-1404658:-1:exon
so has part: feature:1400475-1400591:-1:exon
so has part: feature:1399157-1399230:-1:exon
so has part: feature:1393174-1393232:-1:exon
so has part: feature:1389697-1389748:-1:exon
so has part: feature:1387682-1387781:-1:exon
so has part: feature:1384008-1384092:-1:exon
so has part: feature:1376425-1376562:-1:exon
so has part: feature:1374531-1374562:-1:exon
so has part: feature:1368067-1368130:-1:exon
so has part: feature:1357861-1357987:-1:exon
so has part: feature:1356279-1356355:-1:exon
so has part: feature:1355788-1355835:-1:exon
so has part: feature:1354748-1355371:-1:exon

position:1441363:-1
position: 1441363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1441015-1441363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1440547-1440691:-1:exon

position:1440547:-1
position: 1440547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1434163-1434281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1433519-1433614:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1432899-1433009:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1432348-1432744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1430720-1430832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1425376-1425490:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421869-1421943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1421456-1421568:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1419257-1419329:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1418939-1419141:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1413385-1413448:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1411246-1411430:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1406455-1406580:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1404600-1404658:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1400475-1400591:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1399157-1399230:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1393174-1393232:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1389697-1389748:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1387682-1387781:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1384008-1384092:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1376425-1376562:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1374531-1374562:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1368067-1368130:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1357861-1357987:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1356279-1356355:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1355788-1355835:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1354748-1355371:-1:exon

LOC116957594
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957594
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil and C2 domain-containing protein 1A-like isoform X2
translation: MAGRSRGADRGRGRDNQKEDLKRKLGLLPFPDGDGGGYDDGDGDDGDLEAELAALVGGTEGRGKKEKPRGKVTPGAMEDIARMAAACMRDDDDDDGDDGDDGDLEMDMDLLAELQEVMEDVETEAPVSKPQPQPQAVVPTHSQPMVSLLESRVSLYAEAVSNARLAGESAKARRFERGLKSCQDLLKAAKSGRSISEEDIPPPVATGNKTREANPEPEPKPEVKPEQKSEVRPKPEVKPKPEVLPKPEVRPKPEVAPKPEVKPQPEVKPQPDVKAEVNAKPKASPEPELKPKPGTEQKREPEPGNRSGSEDPSPLLLDLRRRQREYSVAALAAKKHGDTETAVAYLRTARSFDAVISALLRGERVDLSNAPPPPAPPAATAAAAPSPAVLVNVAPSPKVQGPEPPTKPPPSLPDTPLSALEARLSAYRDIAAQAKKEGNSAKARRHERIATSYVDAIKALKAGKPVDFSELPALPSFPPIPGVVGSGGEDAVVASLASLDRHGDLQSAETEAGESGEGGQRSGERSGERSGEKMERAPAATRPVAPPTTTQPVPGPTQPVTKSPAACQQQLQLRMLQRRRTLLHAAALRCKESGDLAGAKTLLKQRRGVDALLEHCQAGVPVDIATIPAPPPLPDSDFEFVSRREARDSERHHEEFSRLGHILRAQHSKCQEIAHQFTLLGNITEMAKYEAMEDEVATQLEFLRKAHSLGLPPPKSHLEKRTMKAIRINSHLTVLEMELLIVKGINLPAPSGCSQGDLNSFIKFEFPFPTSDQPQTDKTHSVKNSCNPVYNAEFKLSIARTNRTFRRAISSKGIRLELYHKRLLKSDLVAWASFRLDKLETQSQIRAIVEMMEGRKPTGGKLEVVARLREPLAGPEFFLSTENWLSVEVVNIAPVTVPKSLPPAAKSVPARMWSLEVLGLEKKLCDAQMAVFRERGQPLPPALGEMAARISQRAERQRHFLRSGGPAARRDFTAFLKTEYSRYSQDAKRYQQSGDKEHERKAIERVRLIQKELRAFQD
SIO_010081: LOC116957594
subclass of: SO_0000673
so part of: LOC116957594
location: complement(join(1355351..1355371,1355788..1355835,1356279..1356355,1357861..1357987,1368067..1368130,1374531..1374562,1376425..1376562,1384008..1384092,1387682..1387781,1389697..1389748,1393174..1393232,1399157..1399230,1400475..1400591,1404600..1404658,1406455..1406580,1411246..1411430,1413385..1413448,1418939..1419141,1419257..1419329,1421456..1421568,1421869..1421943,1425376..1425490,1430720..1430832,1432348..1432744,1432899..1433009,1433519..1433614,1434163..1434281,1440550..1440691,1441015..1441086))
location: region:1355351-1441086:-1
so has part: feature:1441015-1441086:-1:exon
so has part: feature:1440550-1440691:-1:exon
so has part: feature:1434163-1434281:-1:exon
so has part: feature:1433519-1433614:-1:exon
so has part: feature:1432899-1433009:-1:exon
so has part: feature:1432348-1432744:-1:exon
so has part: feature:1430720-1430832:-1:exon
so has part: feature:1425376-1425490:-1:exon
so has part: feature:1421869-1421943:-1:exon
so has part: feature:1421456-1421568:-1:exon
so has part: feature:1419257-1419329:-1:exon
so has part: feature:1418939-1419141:-1:exon
so has part: feature:1413385-1413448:-1:exon
so has part: feature:1411246-1411430:-1:exon
so has part: feature:1406455-1406580:-1:exon
so has part: feature:1404600-1404658:-1:exon
so has part: feature:1400475-1400591:-1:exon
so has part: feature:1399157-1399230:-1:exon
so has part: feature:1393174-1393232:-1:exon
so has part: feature:1389697-1389748:-1:exon
so has part: feature:1387682-1387781:-1:exon
so has part: feature:1384008-1384092:-1:exon
so has part: feature:1376425-1376562:-1:exon
so has part: feature:1374531-1374562:-1:exon
so has part: feature:1368067-1368130:-1:exon
so has part: feature:1357861-1357987:-1:exon
so has part: feature:1356279-1356355:-1:exon
so has part: feature:1355788-1355835:-1:exon
so has part: feature:1355351-1355371:-1:exon

XP_032835726.1
type: Protein
SIO_000068: ncbiprotein

position:1355351:-1
position: 1355351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441086:-1
position: 1441086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1441015-1441086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1440550-1440691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1434163-1434281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1433519-1433614:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1432899-1433009:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1432348-1432744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1430720-1430832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1425376-1425490:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421869-1421943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1421456-1421568:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1419257-1419329:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1418939-1419141:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1413385-1413448:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1411246-1411430:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1406455-1406580:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1404600-1404658:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1400475-1400591:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1399157-1399230:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1393174-1393232:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1389697-1389748:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1387682-1387781:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1384008-1384092:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1376425-1376562:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1374531-1374562:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1368067-1368130:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1357861-1357987:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1356279-1356355:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1355788-1355835:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1355351-1355371:-1:exon

LOC116957594
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957594
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil and C2 domain-containing protein 1A-like isoform X1
translation: MAGRSRGADRGRGRDNQKEDLKRKLGLLPFPDGDGGGYDDGDGDDGDLEAELAALVGGTEGRGKKEKPRGKGVTPGAMEDIARMAAACMRDDDDDDGDDGDDGDLEMDMDLLAELQEVMEDVETEAPVSKPQPQPQAVVPTHSQPMVSLLESRVSLYAEAVSNARLAGESAKARRFERGLKSCQDLLKAAKSGRSISEEDIPPPVATGNKTREANPEPEPKPEVKPEQKSEVRPKPEVKPKPEVLPKPEVRPKPEVAPKPEVKPQPEVKPQPDVKAEVNAKPKASPEPELKPKPGTEQKREPEPGNRSGSEDPSPLLLDLRRRQREYSVAALAAKKHGDTETAVAYLRTARSFDAVISALLRGERVDLSNAPPPPAPPAATAAAAPSPAVLVNVAPSPKVQGPEPPTKPPPSLPDTPLSALEARLSAYRDIAAQAKKEGNSAKARRHERIATSYVDAIKALKAGKPVDFSELPALPSFPPIPGVVGSGGEDAVVASLASLDRHGDLQSAETEAGESGEGGQRSGERSGERSGEKMERAPAATRPVAPPTTTQPVPGPTQPVTKSPAACQQQLQLRMLQRRRTLLHAAALRCKESGDLAGAKTLLKQRRGVDALLEHCQAGVPVDIATIPAPPPLPDSDFEFVSRREARDSERHHEEFSRLGHILRAQHSKCQEIAHQFTLLGNITEMAKYEAMEDEVATQLEFLRKAHSLGLPPPKSHLEKRTMKAIRINSHLTVLEMELLIVKGINLPAPSGCSQGDLNSFIKFEFPFPTSDQPQTDKTHSVKNSCNPVYNAEFKLSIARTNRTFRRAISSKGIRLELYHKRLLKSDLVAWASFRLDKLETQSQIRAIVEMMEGRKPTGGKLEVVARLREPLAGPEFFLSTENWLSVEVVNIAPVTVPKSLPPAAKSVPARMWSLEVLGLEKKLCDAQMAVFRERGQPLPPALGEMAARISQRAERQRHFLRSGGPAARRDFTAFLKTEYSRYSQDAKRYQQSGDKEHERKAIERVRLIQKELRAFQD
SIO_010081: LOC116957594
subclass of: SO_0000673
so part of: LOC116957594
location: complement(join(1355351..1355371,1355788..1355835,1356279..1356355,1357861..1357987,1368067..1368130,1374531..1374562,1376425..1376562,1384008..1384092,1387682..1387781,1389697..1389748,1393174..1393232,1399157..1399230,1400475..1400591,1404600..1404658,1406455..1406580,1411246..1411430,1413385..1413448,1418939..1419141,1419257..1419329,1421456..1421568,1421869..1421943,1425376..1425490,1430720..1430832,1432348..1432744,1432899..1433009,1433519..1433614,1434163..1434281,1440547..1440691,1441015..1441086))
location: region:1355351-1441086:-1
so has part: feature:1441015-1441086:-1:exon
so has part: feature:1440547-1440691:-1:exon
so has part: feature:1434163-1434281:-1:exon
so has part: feature:1433519-1433614:-1:exon
so has part: feature:1432899-1433009:-1:exon
so has part: feature:1432348-1432744:-1:exon
so has part: feature:1430720-1430832:-1:exon
so has part: feature:1425376-1425490:-1:exon
so has part: feature:1421869-1421943:-1:exon
so has part: feature:1421456-1421568:-1:exon
so has part: feature:1419257-1419329:-1:exon
so has part: feature:1418939-1419141:-1:exon
so has part: feature:1413385-1413448:-1:exon
so has part: feature:1411246-1411430:-1:exon
so has part: feature:1406455-1406580:-1:exon
so has part: feature:1404600-1404658:-1:exon
so has part: feature:1400475-1400591:-1:exon
so has part: feature:1399157-1399230:-1:exon
so has part: feature:1393174-1393232:-1:exon
so has part: feature:1389697-1389748:-1:exon
so has part: feature:1387682-1387781:-1:exon
so has part: feature:1384008-1384092:-1:exon
so has part: feature:1376425-1376562:-1:exon
so has part: feature:1374531-1374562:-1:exon
so has part: feature:1368067-1368130:-1:exon
so has part: feature:1357861-1357987:-1:exon
so has part: feature:1356279-1356355:-1:exon
so has part: feature:1355788-1355835:-1:exon
so has part: feature:1355351-1355371:-1:exon

XP_032835725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1441015-1441086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1440547-1440691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1434163-1434281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1433519-1433614:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1432899-1433009:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1432348-1432744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1430720-1430832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1425376-1425490:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421869-1421943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1421456-1421568:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1419257-1419329:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1418939-1419141:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1413385-1413448:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1411246-1411430:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1406455-1406580:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1404600-1404658:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1400475-1400591:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1399157-1399230:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1393174-1393232:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1389697-1389748:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1387682-1387781:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1384008-1384092:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1376425-1376562:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1374531-1374562:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1368067-1368130:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1357861-1357987:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1356279-1356355:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1355788-1355835:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1355351-1355371:-1:exon

LOC116957595
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957595
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1442983..1477872)
location: region:1442983-1477872:-1
so has part: feature:1442983-1477872:-1:exon
subclass of: SO_0000010

116957595
type: Gene
SIO_000068: ncbigene

position:1442983:-1
position: 1442983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1477872:-1
position: 1477872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1442983-1477872:-1:exon

LOC116957595
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957595
product: origin recognition complex subunit 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_032979836.1
SIO_010081: LOC116957595
subclass of: SO_0000673
so part of: LOC116957595
location: complement(join(1442983..1443950,1444172..1444259,1444979..1445250,1445917..1446036,1448889..1449038,1454361..1454462,1455274..1455445,1456838..1456933,1457475..1457545,1464714..1465005,1465422..1465554,1466970..1467035,1468055..1468292,1477771..1477872))
location: region:1442983-1477872:-1
so has part: feature:1477771-1477872:-1:exon
so has part: feature:1468055-1468292:-1:exon
so has part: feature:1466970-1467035:-1:exon
so has part: feature:1465422-1465554:-1:exon
so has part: feature:1464714-1465005:-1:exon
so has part: feature:1457475-1457545:-1:exon
so has part: feature:1456838-1456933:-1:exon
so has part: feature:1455274-1455445:-1:exon
so has part: feature:1454361-1454462:-1:exon
so has part: feature:1448889-1449038:-1:exon
so has part: feature:1445917-1446036:-1:exon
so has part: feature:1444979-1445250:-1:exon
so has part: feature:1444172-1444259:-1:exon
so has part: feature:1442983-1443950:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1477771-1477872:-1:exon

position:1477771:-1
position: 1477771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1468055-1468292:-1:exon

position:1468055:-1
position: 1468055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1468292:-1
position: 1468292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1466970-1467035:-1:exon

position:1466970:-1
position: 1466970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1467035:-1
position: 1467035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1465422-1465554:-1:exon

position:1465422:-1
position: 1465422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1465554:-1
position: 1465554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1464714-1465005:-1:exon

position:1464714:-1
position: 1464714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1465005:-1
position: 1465005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1457475-1457545:-1:exon

position:1457475:-1
position: 1457475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1457545:-1
position: 1457545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1456838-1456933:-1:exon

position:1456838:-1
position: 1456838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1456933:-1
position: 1456933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1455274-1455445:-1:exon

position:1455274:-1
position: 1455274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1455445:-1
position: 1455445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1454361-1454462:-1:exon

position:1454361:-1
position: 1454361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1454462:-1
position: 1454462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1448889-1449038:-1:exon

position:1448889:-1
position: 1448889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1449038:-1
position: 1449038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1445917-1446036:-1:exon

position:1445917:-1
position: 1445917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1446036:-1
position: 1446036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1444979-1445250:-1:exon

position:1444979:-1
position: 1444979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445250:-1
position: 1445250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1444172-1444259:-1:exon

position:1444172:-1
position: 1444172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1444259:-1
position: 1444259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1442983-1443950:-1:exon

position:1443950:-1
position: 1443950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957595
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: origin recognition complex subunit 1-like
translation: MPRYNTRNSGSTIVDSGSKIRSSGSTIPDSGPKTRSSGSKIPDSGSSILDSGGSRKRRAAEDHGRRLGHVTPVMTSPDTKCTLVPRVSISDILSLILSDETDDGDDDGTHQQYSVNLTPTSRKRLGNQQHQQQQSDILRLAPVSSPLRVKTTTFQPSRPPPSSLPPLPSSPPSPPPPSSSTSPPPSSPPPSSPPSSLSPSSSSPSSPPSSSSLSSPSSPSSSASSSPVPVRRTKKVLRKPQTKAQKTKTTRTPKLPSRTQALKTETGPSVSLPCLPCRESEFHEILDFVESKLDTLSGGCMFISGVPGTGKTATIRAVLSYLVDQAGPRGDEALTVVSINAMELTEPRQVYSKLLKAMSGERAAPSRAAQILNELFARRSKRSVLLILDELDLLVTRRQDLLYSLSDWATGGSSCLILLAIANTLDLPERVMLTRVSSRLGLTRMCFQPYSFQQLQEIARSHLSGVASFEPDALQLVARKVAALSGDARRMLDVCRRAAEIAAAEVKASSSISPTCPTSSSANGRRAAGRSRDPARAAAVAANGKEPRVGLRQVGAALEETFRSPCVAATRECSSLDKFFLEAVLSEFSRTGLEETSFGQVFVSLRSLLLLSGHPPCSVSAALGSCSRLLSARLLLSSSTPGLRRRLRLNVPRADLLYALRGGDSA
SIO_010081: LOC116957595
subclass of: SO_0000673
so part of: LOC116957595
location: complement(join(1443750..1443950,1444172..1444259,1444979..1445250,1445917..1446036,1448889..1449038,1454361..1454462,1455274..1455445,1456838..1456933,1457475..1457545,1464714..1465005,1465422..1465554,1466970..1467035,1468055..1468292))
location: region:1443750-1468292:-1
so has part: feature:1468055-1468292:-1:exon
so has part: feature:1466970-1467035:-1:exon
so has part: feature:1465422-1465554:-1:exon
so has part: feature:1464714-1465005:-1:exon
so has part: feature:1457475-1457545:-1:exon
so has part: feature:1456838-1456933:-1:exon
so has part: feature:1455274-1455445:-1:exon
so has part: feature:1454361-1454462:-1:exon
so has part: feature:1448889-1449038:-1:exon
so has part: feature:1445917-1446036:-1:exon
so has part: feature:1444979-1445250:-1:exon
so has part: feature:1444172-1444259:-1:exon
so has part: feature:1443750-1443950:-1:exon

XP_032835727.1
type: Protein
SIO_000068: ncbiprotein

position:1443750:-1
position: 1443750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1468055-1468292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1466970-1467035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465422-1465554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1464714-1465005:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1457475-1457545:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1456838-1456933:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1455274-1455445:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1454361-1454462:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1448889-1449038:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1445917-1446036:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1444979-1445250:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1444172-1444259:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1443750-1443950:-1:exon

LOC103091750
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC103091750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1504603..1548842)
location: region:1504603-1548842:-1
so has part: feature:1504603-1548842:-1:exon

103091750
type: Gene
SIO_000068: ncbigene

position:1504603:-1
position: 1504603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548842:-1
position: 1548842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1504603-1548842:-1:exon

LOC103091750
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7757
gene: LOC103091750
product: uncharacterized LOC103091750
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XR_004405205.1
SIO_010081: LOC103091750
so part of: LOC103091750
location: complement(join(1504603..1505334,1509114..1509197,1514533..1514559,1516297..1516323,1528637..1528841,1528974..1529125,1538922..1538995,1548531..1548595,1548710..1548842))
location: region:1504603-1548842:-1
so has part: feature:1548710-1548842:-1:exon
so has part: feature:1548531-1548595:-1:exon
so has part: feature:1538922-1538995:-1:exon
so has part: feature:1528974-1529125:-1:exon
so has part: feature:1528637-1528841:-1:exon
so has part: feature:1516297-1516323:-1:exon
so has part: feature:1514533-1514559:-1:exon
so has part: feature:1509114-1509197:-1:exon
so has part: feature:1504603-1505334:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1548710-1548842:-1:exon

position:1548710:-1
position: 1548710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1548531-1548595:-1:exon

position:1548531:-1
position: 1548531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548595:-1
position: 1548595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1538922-1538995:-1:exon

position:1538922:-1
position: 1538922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1538995:-1
position: 1538995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1528974-1529125:-1:exon

position:1528974:-1
position: 1528974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1529125:-1
position: 1529125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1528637-1528841:-1:exon

position:1528637:-1
position: 1528637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1528841:-1
position: 1528841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1516297-1516323:-1:exon

position:1516297:-1
position: 1516297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1516323:-1
position: 1516323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1514533-1514559:-1:exon

position:1514533:-1
position: 1514533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514559:-1
position: 1514559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1509114-1509197:-1:exon

position:1509114:-1
position: 1509114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1509197:-1
position: 1509197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1504603-1505334:-1:exon

position:1505334:-1
position: 1505334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957602
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1578943..1715455)
location: region:1578943-1715455:-1
so has part: feature:1578943-1715455:-1:exon
subclass of: SO_0000010

116957602
type: Gene
SIO_000068: ncbigene

position:1578943:-1
position: 1578943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1715455:-1
position: 1715455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1578943-1715455:-1:exon

LOC116957602
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957602
product: uncharacterized LOC116957602, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032979849.1
SIO_010081: LOC116957602
subclass of: SO_0000673
so part of: LOC116957602
location: complement(join(1578943..1580363,1584973..1585084,1585842..1585944,1589416..1589448,1652261..1652480,1659707..1659855,1660754..1660952,1711974..1712170,1715003..1715455))
location: region:1578943-1715455:-1
so has part: feature:1715003-1715455:-1:exon
so has part: feature:1711974-1712170:-1:exon
so has part: feature:1660754-1660952:-1:exon
so has part: feature:1659707-1659855:-1:exon
so has part: feature:1652261-1652480:-1:exon
so has part: feature:1589416-1589448:-1:exon
so has part: feature:1585842-1585944:-1:exon
so has part: feature:1584973-1585084:-1:exon
so has part: feature:1578943-1580363:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1715003-1715455:-1:exon

position:1715003:-1
position: 1715003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1711974-1712170:-1:exon

position:1711974:-1
position: 1711974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1712170:-1
position: 1712170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1660754-1660952:-1:exon

position:1660754:-1
position: 1660754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1660952:-1
position: 1660952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1659707-1659855:-1:exon

position:1659707:-1
position: 1659707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1659855:-1
position: 1659855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1652261-1652480:-1:exon

position:1652261:-1
position: 1652261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1652480:-1
position: 1652480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1589416-1589448:-1:exon

position:1589416:-1
position: 1589416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1589448:-1
position: 1589448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1585842-1585944:-1:exon

position:1585842:-1
position: 1585842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1585944:-1
position: 1585944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1584973-1585084:-1:exon

position:1584973:-1
position: 1584973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1585084:-1
position: 1585084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1578943-1580363:-1:exon

position:1580363:-1
position: 1580363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957602
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957602
product: uncharacterized LOC116957602, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032979853.1
SIO_010081: LOC116957602
subclass of: SO_0000673
so part of: LOC116957602
location: complement(join(1578943..1580363,1584973..1585084,1585842..1585944,1589416..1589448,1592965..1593166,1599074..1599222,1600121..1600319,1601020..1601216,1666836..1667268))
location: region:1578943-1667268:-1
so has part: feature:1666836-1667268:-1:exon
so has part: feature:1601020-1601216:-1:exon
so has part: feature:1600121-1600319:-1:exon
so has part: feature:1599074-1599222:-1:exon
so has part: feature:1592965-1593166:-1:exon
so has part: feature:1589416-1589448:-1:exon
so has part: feature:1585842-1585944:-1:exon
so has part: feature:1584973-1585084:-1:exon
so has part: feature:1578943-1580363:-1:exon

position:1667268:-1
position: 1667268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1666836-1667268:-1:exon

position:1666836:-1
position: 1666836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1601020-1601216:-1:exon

position:1601020:-1
position: 1601020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1601216:-1
position: 1601216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1600121-1600319:-1:exon

position:1600121:-1
position: 1600121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1600319:-1
position: 1600319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1599074-1599222:-1:exon

position:1599074:-1
position: 1599074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1599222:-1
position: 1599222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1592965-1593166:-1:exon

position:1592965:-1
position: 1592965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1593166:-1
position: 1593166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1589416-1589448:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1585842-1585944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1584973-1585084:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1578943-1580363:-1:exon

LOC116957602
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957602
product: uncharacterized LOC116957602, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032979850.1
SIO_010081: LOC116957602
subclass of: SO_0000673
so part of: LOC116957602
location: complement(join(1578943..1580363,1584973..1585084,1585842..1585944,1589416..1589448,1652261..1652480,1659707..1659855,1660754..1660952,1661652..1661848,1666836..1667268))
location: region:1578943-1667268:-1
so has part: feature:1666836-1667268:-1:exon
so has part: feature:1661652-1661848:-1:exon
so has part: feature:1660754-1660952:-1:exon
so has part: feature:1659707-1659855:-1:exon
so has part: feature:1652261-1652480:-1:exon
so has part: feature:1589416-1589448:-1:exon
so has part: feature:1585842-1585944:-1:exon
so has part: feature:1584973-1585084:-1:exon
so has part: feature:1578943-1580363:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1666836-1667268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1661652-1661848:-1:exon

position:1661652:-1
position: 1661652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1661848:-1
position: 1661848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1660754-1660952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1659707-1659855:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1652261-1652480:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1589416-1589448:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1585842-1585944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1584973-1585084:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1578943-1580363:-1:exon

LOC116957602
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957602
product: uncharacterized LOC116957602, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_032979851.1
SIO_010081: LOC116957602
subclass of: SO_0000673
so part of: LOC116957602
location: complement(join(1578943..1580363,1584973..1585084,1585842..1585944,1589416..1589448,1592965..1593166,1599074..1599222,1600121..1600319,1601020..1601216,1604052..1604493))
location: region:1578943-1604493:-1
so has part: feature:1604052-1604493:-1:exon
so has part: feature:1601020-1601216:-1:exon
so has part: feature:1600121-1600319:-1:exon
so has part: feature:1599074-1599222:-1:exon
so has part: feature:1592965-1593166:-1:exon
so has part: feature:1589416-1589448:-1:exon
so has part: feature:1585842-1585944:-1:exon
so has part: feature:1584973-1585084:-1:exon
so has part: feature:1578943-1580363:-1:exon

position:1604493:-1
position: 1604493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1604052-1604493:-1:exon

position:1604052:-1
position: 1604052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1601020-1601216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1600121-1600319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1599074-1599222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1592965-1593166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1589416-1589448:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1585842-1585944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1584973-1585084:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1578943-1580363:-1:exon

LOC116957602
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957602
product: uncharacterized LOC116957602, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032979854.1
SIO_010081: LOC116957602
subclass of: SO_0000673
so part of: LOC116957602
location: complement(join(1578943..1580363,1584973..1585084,1585842..1585944,1589416..1589448,1592965..1593166,1599074..1599222,1600121..1600319,1600973..1601216,1604052..1604493))
location: region:1578943-1604493:-1
so has part: feature:1604052-1604493:-1:exon
so has part: feature:1600973-1601216:-1:exon
so has part: feature:1600121-1600319:-1:exon
so has part: feature:1599074-1599222:-1:exon
so has part: feature:1592965-1593166:-1:exon
so has part: feature:1589416-1589448:-1:exon
so has part: feature:1585842-1585944:-1:exon
so has part: feature:1584973-1585084:-1:exon
so has part: feature:1578943-1580363:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1604052-1604493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1600973-1601216:-1:exon

position:1600973:-1
position: 1600973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1600121-1600319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1599074-1599222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1592965-1593166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1589416-1589448:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1585842-1585944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1584973-1585084:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1578943-1580363:-1:exon

LOC116957602
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957602 isoform X1
translation: MAVDLTTSVPATTIIIIAVVISGIIAADDEKMKTVCEKQLSHCSKGYNVCGVEGEDLLVRCPLTPNTSLPDWIIVQLIQQHPAAAKTIVGTYYSPDPSAKSTHLAFEFTALEMNFAVFVARNANATQGGDYSCLVISTRNNSDIKTHFQVKLYKALSVSIEKDVSADERGDVTLWCNITQPEREEYMCGVMWMLPSTSVTVSLNDSQVSSGVHQLGHVMYEGHLDLRHGSSYVTLYNVTRAHGGNYSCVVNTSGSRGSATGRLWITSPSTTERTKEYEETHEKDDNNKDSYLYLLAIFIILVLVFAFWLKKRRNNKANNNIIRSEPENNSPYDVENEARNNATENREHAANSTEIPTGNKGSAVYAVLEHHGDRLTAGQEPASCIYSLASAATADHTTSPEGSCLYSVVNVDNKERKKKTKEKNEHQAALGIYSLVNAGSS
SIO_010081: LOC116957602
subclass of: SO_0000673
so part of: LOC116957602
location: complement(join(1580118..1580363,1584973..1585084,1585842..1585944,1589416..1589448,1652261..1652480,1659707..1659855,1660754..1660952,1711974..1712170,1715003..1715069))
location: region:1580118-1715069:-1
so has part: feature:1715003-1715069:-1:exon
so has part: feature:1711974-1712170:-1:exon
so has part: feature:1660754-1660952:-1:exon
so has part: feature:1659707-1659855:-1:exon
so has part: feature:1652261-1652480:-1:exon
so has part: feature:1589416-1589448:-1:exon
so has part: feature:1585842-1585944:-1:exon
so has part: feature:1584973-1585084:-1:exon
so has part: feature:1580118-1580363:-1:exon

XP_032835740.1
type: Protein
SIO_000068: ncbiprotein

position:1580118:-1
position: 1580118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1715069:-1
position: 1715069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1715003-1715069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1711974-1712170:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1660754-1660952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1659707-1659855:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1652261-1652480:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1589416-1589448:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1585842-1585944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1584973-1585084:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1580118-1580363:-1:exon

LOC116957602
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957602 isoform X4
translation: MAVDLTTSVPATIIIISVVISGVIAADDGKTKAVCEKELSHCSKGYNVCGVEGEDLLVRCQLPANTGLPDLILVQLMQLPPAAAKTIVGFYYSPDSSAKSTNLAFEFTGLEMNFAVFVARNANATQGGDYSCVVISTRNNSNKETHFQVKLYKALSVSVEKDVSADERGDVTLWCNITQPEREEYMCGVMWMLPSTSVTVSLNDSQVSSGVHQLGDVMYEGHLDLRHGSSYVTLYNVTRAHGGNYSCVINTNGSRGSATGRLWITSPSPTEETHEKDDNNKDSYLYLLAIFIILVLVFAFWLKKRRNNKANNNIIRSEPENNSPYDVENEARNNATENREHAANSTEIPTGNKGSAVYAVLEHHGDRLTAGQEPASCIYSLASAATADHTTSPEGSCLYSVVNVDNKERKKKTKEKNEHQAALGIYSLVNAGSS
SIO_010081: LOC116957602
subclass of: SO_0000673
so part of: LOC116957602
location: complement(join(1580118..1580363,1584973..1585084,1585842..1585944,1589416..1589448,1592965..1593166,1599074..1599222,1600121..1600319,1601020..1601216,1666836..1666899))
location: region:1580118-1666899:-1
so has part: feature:1666836-1666899:-1:exon
so has part: feature:1601020-1601216:-1:exon
so has part: feature:1600121-1600319:-1:exon
so has part: feature:1599074-1599222:-1:exon
so has part: feature:1592965-1593166:-1:exon
so has part: feature:1589416-1589448:-1:exon
so has part: feature:1585842-1585944:-1:exon
so has part: feature:1584973-1585084:-1:exon
so has part: feature:1580118-1580363:-1:exon

XP_032835744.1
type: Protein
SIO_000068: ncbiprotein

position:1666899:-1
position: 1666899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1666836-1666899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1601020-1601216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1600121-1600319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1599074-1599222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1592965-1593166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1589416-1589448:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1585842-1585944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1584973-1585084:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1580118-1580363:-1:exon

LOC116957602
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957602 isoform X2
translation: MAVDLTTSVPATIIIISVVISGVIAADDVKTKAVCEKQLSHCSKGYNVCGVEGEDLLVRCPLTPNTSLPDLILVQLMQLPPAAAKTIVGTYYSPDPSAKSTHLAFEFTALEMNFAVFVARNANATQGGDYSCLVISTRNNSDIKTHFQVKLYKALSVSIEKDVSADERGDVTLWCNITQPEREEYMCGVMWMLPSTSVTVSLNDSQVSSGVHQLGHVMYEGHLDLRHGSSYVTLYNVTRAHGGNYSCVVNTSGSRGSATGRLWITSPSTTERTKEYEETHEKDDNNKDSYLYLLAIFIILVLVFAFWLKKRRNNKANNNIIRSEPENNSPYDVENEARNNATENREHAANSTEIPTGNKGSAVYAVLEHHGDRLTAGQEPASCIYSLASAATADHTTSPEGSCLYSVVNVDNKERKKKTKEKNEHQAALGIYSLVNAGSS
SIO_010081: LOC116957602
subclass of: SO_0000673
so part of: LOC116957602
location: complement(join(1580118..1580363,1584973..1585084,1585842..1585944,1589416..1589448,1652261..1652480,1659707..1659855,1660754..1660952,1661652..1661848,1666836..1666899))
location: region:1580118-1666899:-1
so has part: feature:1666836-1666899:-1:exon
so has part: feature:1661652-1661848:-1:exon
so has part: feature:1660754-1660952:-1:exon
so has part: feature:1659707-1659855:-1:exon
so has part: feature:1652261-1652480:-1:exon
so has part: feature:1589416-1589448:-1:exon
so has part: feature:1585842-1585944:-1:exon
so has part: feature:1584973-1585084:-1:exon
so has part: feature:1580118-1580363:-1:exon

XP_032835741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1666836-1666899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1661652-1661848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1660754-1660952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1659707-1659855:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1652261-1652480:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1589416-1589448:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1585842-1585944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1584973-1585084:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1580118-1580363:-1:exon

LOC116957602
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957602 isoform X3
translation: MAVDLTTSVPATIIIIIAVVISGVIAADDGKTKAVCEKELSHCSKGYNVCGVEGEDLLVRCQLPANTGLPDLILVQLMQLPPAAAKTIVGFYYSPDSSAKSTNLAFEFTGLEMNFAVFVARNANATQGGDYSCVVISTRNNSNKETHFQVKLYKALSVSVEKDVSADERGDVTLWCNITQPEREEYMCGVMWMLPSTSVTVSLNDSQVSSGVHQLGDVMYEGHLDLRHGSSYVTLYNVTRAHGGNYSCVINTNGSRGSATGRLWITSPSPTEETHEKDDNNKDSYLYLLAIFIILVLVFAFWLKKRRNNKANNNIIRSEPENNSPYDVENEARNNATENREHAANSTEIPTGNKGSAVYAVLEHHGDRLTAGQEPASCIYSLASAATADHTTSPEGSCLYSVVNVDNKERKKKTKEKNEHQAALGIYSLVNAGSS
SIO_010081: LOC116957602
subclass of: SO_0000673
so part of: LOC116957602
location: complement(join(1580118..1580363,1584973..1585084,1585842..1585944,1589416..1589448,1592965..1593166,1599074..1599222,1600121..1600319,1601020..1601216,1604052..1604118))
location: region:1580118-1604118:-1
so has part: feature:1604052-1604118:-1:exon
so has part: feature:1601020-1601216:-1:exon
so has part: feature:1600121-1600319:-1:exon
so has part: feature:1599074-1599222:-1:exon
so has part: feature:1592965-1593166:-1:exon
so has part: feature:1589416-1589448:-1:exon
so has part: feature:1585842-1585944:-1:exon
so has part: feature:1584973-1585084:-1:exon
so has part: feature:1580118-1580363:-1:exon

XP_032835742.1
type: Protein
SIO_000068: ncbiprotein

position:1604118:-1
position: 1604118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1604052-1604118:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1601020-1601216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1600121-1600319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1599074-1599222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1592965-1593166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1589416-1589448:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1585842-1585944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1584973-1585084:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1580118-1580363:-1:exon

LOC116957602
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957602 isoform X5
translation: MSTACKHGPPRFDTRATNAVTSSSCKNHSGSLFTCCSVFLFMSSVGFYYSPDSSAKSTNLAFEFTGLEMNFAVFVARNANATQGGDYSCVVISTRNNSNKETHFQVKLYKALSVSVEKDVSADERGDVTLWCNITQPEREEYMCGVMWMLPSTSVTVSLNDSQVSSGVHQLGDVMYEGHLDLRHGSSYVTLYNVTRAHGGNYSCVINTNGSRGSATGRLWITSPSPTEETHEKDDNNKDSYLYLLAIFIILVLVFAFWLKKRRNNKANNNIIRSEPENNSPYDVENEARNNATENREHAANSTEIPTGNKGSAVYAVLEHHGDRLTAGQEPASCIYSLASAATADHTTSPEGSCLYSVVNVDNKERKKKTKEKNEHQAALGIYSLVNAGSS
SIO_010081: LOC116957602
subclass of: SO_0000673
so part of: LOC116957602
location: complement(join(1580118..1580363,1584973..1585084,1585842..1585944,1589416..1589448,1592965..1593166,1599074..1599222,1600121..1600319,1600973..1601104))
location: region:1580118-1601104:-1
so has part: feature:1600973-1601104:-1:exon
so has part: feature:1600121-1600319:-1:exon
so has part: feature:1599074-1599222:-1:exon
so has part: feature:1592965-1593166:-1:exon
so has part: feature:1589416-1589448:-1:exon
so has part: feature:1585842-1585944:-1:exon
so has part: feature:1584973-1585084:-1:exon
so has part: feature:1580118-1580363:-1:exon

XP_032835745.1
type: Protein
SIO_000068: ncbiprotein

position:1601104:-1
position: 1601104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1600973-1601104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1600121-1600319:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1599074-1599222:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1592965-1593166:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1589416-1589448:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1585842-1585944:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1584973-1585084:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1580118-1580363:-1:exon

LOC116957597
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1756801..1805525)
location: region:1756801-1805525:-1
so has part: feature:1756801-1805525:-1:exon
subclass of: SO_0000010

116957597
type: Gene
SIO_000068: ncbigene

position:1756801:-1
position: 1756801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1805525:-1
position: 1805525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1756801-1805525:-1:exon

LOC116957597
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957597
product: adhesion G-protein coupled receptor F1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032979839.1
SIO_010081: LOC116957597
subclass of: SO_0000673
so part of: LOC116957597
location: complement(join(1756801..1757209,1760892..1761029,1762328..1762408,1764592..1764610,1765988..1766029,1766398..1766439,1766959..1767867,1768726..1768942,1770851..1771055,1782648..1782813,1783975..1784178,1785944..1786125,1786905..1787042,1789790..1790008,1790942..1791145,1791649..1793208,1803772..1803802,1804877..1805525))
location: region:1756801-1805525:-1
so has part: feature:1804877-1805525:-1:exon
so has part: feature:1803772-1803802:-1:exon
so has part: feature:1791649-1793208:-1:exon
so has part: feature:1790942-1791145:-1:exon
so has part: feature:1789790-1790008:-1:exon
so has part: feature:1786905-1787042:-1:exon
so has part: feature:1785944-1786125:-1:exon
so has part: feature:1783975-1784178:-1:exon
so has part: feature:1782648-1782813:-1:exon
so has part: feature:1770851-1771055:-1:exon
so has part: feature:1768726-1768942:-1:exon
so has part: feature:1766959-1767867:-1:exon
so has part: feature:1766398-1766439:-1:exon
so has part: feature:1765988-1766029:-1:exon
so has part: feature:1764592-1764610:-1:exon
so has part: feature:1762328-1762408:-1:exon
so has part: feature:1760892-1761029:-1:exon
so has part: feature:1756801-1757209:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1804877-1805525:-1:exon

position:1804877:-1
position: 1804877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1803772-1803802:-1:exon

position:1803772:-1
position: 1803772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1803802:-1
position: 1803802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1791649-1793208:-1:exon

position:1791649:-1
position: 1791649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1793208:-1
position: 1793208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1790942-1791145:-1:exon

position:1790942:-1
position: 1790942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1791145:-1
position: 1791145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1789790-1790008:-1:exon

position:1789790:-1
position: 1789790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1790008:-1
position: 1790008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1786905-1787042:-1:exon

position:1786905:-1
position: 1786905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1787042:-1
position: 1787042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1785944-1786125:-1:exon

position:1785944:-1
position: 1785944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1786125:-1
position: 1786125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1783975-1784178:-1:exon

position:1783975:-1
position: 1783975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1784178:-1
position: 1784178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1782648-1782813:-1:exon

position:1782648:-1
position: 1782648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1782813:-1
position: 1782813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1770851-1771055:-1:exon

position:1770851:-1
position: 1770851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1771055:-1
position: 1771055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1768726-1768942:-1:exon

position:1768726:-1
position: 1768726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1768942:-1
position: 1768942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1766959-1767867:-1:exon

position:1766959:-1
position: 1766959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1767867:-1
position: 1767867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1766398-1766439:-1:exon

position:1766398:-1
position: 1766398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1766439:-1
position: 1766439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1765988-1766029:-1:exon

position:1765988:-1
position: 1765988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1766029:-1
position: 1766029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1764592-1764610:-1:exon

position:1764592:-1
position: 1764592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1764610:-1
position: 1764610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1762328-1762408:-1:exon

position:1762328:-1
position: 1762328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1762408:-1
position: 1762408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1760892-1761029:-1:exon

position:1760892:-1
position: 1760892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1761029:-1
position: 1761029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1756801-1757209:-1:exon

position:1757209:-1
position: 1757209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957597
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957597
product: adhesion G-protein coupled receptor F1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032979840.1
SIO_010081: LOC116957597
subclass of: SO_0000673
so part of: LOC116957597
location: complement(join(1756801..1757209,1760892..1761029,1762328..1762408,1764592..1764610,1765988..1766029,1766398..1766439,1766959..1767867,1768726..1768942,1770851..1771055,1782648..1782813,1783975..1784178,1785944..1786125,1786905..1787042,1789790..1790008,1790942..1791197))
location: region:1756801-1791197:-1
so has part: feature:1790942-1791197:-1:exon
so has part: feature:1789790-1790008:-1:exon
so has part: feature:1786905-1787042:-1:exon
so has part: feature:1785944-1786125:-1:exon
so has part: feature:1783975-1784178:-1:exon
so has part: feature:1782648-1782813:-1:exon
so has part: feature:1770851-1771055:-1:exon
so has part: feature:1768726-1768942:-1:exon
so has part: feature:1766959-1767867:-1:exon
so has part: feature:1766398-1766439:-1:exon
so has part: feature:1765988-1766029:-1:exon
so has part: feature:1764592-1764610:-1:exon
so has part: feature:1762328-1762408:-1:exon
so has part: feature:1760892-1761029:-1:exon
so has part: feature:1756801-1757209:-1:exon

position:1791197:-1
position: 1791197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1790942-1791197:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1789790-1790008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1786905-1787042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1785944-1786125:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1783975-1784178:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1782648-1782813:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1770851-1771055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1768726-1768942:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1766959-1767867:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1766398-1766439:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1765988-1766029:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1764592-1764610:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1762328-1762408:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1760892-1761029:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1756801-1757209:-1:exon

LOC116957597
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor F5-like isoform X1
translation: MTVRGIQSWHFKMYIISLGLTLMIPLQVFTLHTGCVQEAGMTLCWCEQGSVWSASMCNSLGPCFLHSASAQGKSPCACVRQSPPDSERCLPATQASSSAGHADPVVRCHGGVPNGALARKEKGEFSDGCGEDSSSGAEEFQGIRRHGEGIITVDGGRERDVHHAEGAAFVGGVKEDGDNRASIVQAERDSVDFVPPRKGHDDVRHSREDRIVPLEGDRVLEAKGEEGEVIRKRRQVLLPVEDRNSDFRDQTDDYDSTDEYETSPMSTSTSSILSSPLSLMTPIGSTNTAGQQTRSSTGQAGPGPSMDSTGMTTATIVDDGDSTGEYEDSTSTAAASTDGDTAMFGSTPADLSQLTKSPPTEVSPLTASTATPQWTSHTVYTTADVDPVTDSTTGSDVTSEIVSASPGVSLIPTPNLSPVTRPDVSLITTPDVSPITNPNVSLITKPDVSPVTRPDVSLITTPDVSPITNPNVSLITKPDVSPVTRPDVSINTMPDVSPITSLASPITIPGGSSVTTSRVSPFTTLGVSSVTNPGITSSTVSPNACKEGSSPIQWRNVNLSDASINEGANVTLTMAEPEVAPESVMWWSNDTVVVNGSVFTLGVAPGKGPTLTIKGINKKHQGVYSCEACVGTVLVKGSVTLPIILAVPVVDIEQSSLPQISVACSEPTTLTCCLTSLEGNMTVTWKNETVQTSSVTASSLCSTYKATISNPCQDTVYTCTFSNEVGATSYAIAVYYIPTNDKTCPSNYPWPETKRNGVAHVRCPPGYRGTALRRCSADGVWGAIFKNCTSNRFTNVEGKVQLMEDGIGNPTELVPQLLAEMKTITQVPEPSSQEQTLLMGDVRSAHASLDKIIHVASARDVRFNKNVSKDFLDSASNLLDGSVKESWSQLEFMGSMDSSSLLQTTEDFTHLIDAEEFFSSARTLGSKKSREDFNLSSSNILMAGSLYRAGETPTAYHQQFKVDEQTSSVYIDSMAISNLTEKSNLTITSMAFTTLMDLLPLRLAPGLASEASSGPPSVGSLVLSTVLSGAQGGNSSSISMNLALRGVEPGAPLKKTPHCSFWDFKLNGSVGGWSTEGCMTSNITDNAVSCICTHTTPFSILRLPETSQVDLTFAIITYVCLSISNVFLIFAVVLESMLLHQNKRYGQESNGEENDDDHGGHHSLSRGIKLNIICALLLSHVWFMVAISNSNPTVCSLSQFFLHLSYLCAFSWLLVQAIHLLLNGNSIYGGSSGRKVMAATFAGGYGLPVLISVITVAATHSQPDSCWLNWDSSNALFALVIPVLLVIAVDLAVAVYVLLRTRLWDHDGQKLQEGGGLLGDSTTGKAWKLLILMTGLAVIWGVGAYFFMPDGNKIPAVTYLFAVLNAIQGVIVVVFNSLLDEEVKQLLNRSMTIVSYEGMKEKDSPLVVSEYDIENNTVDGVYRLQRPNQVTCAICGGLPEVSCTECKQSFCRGCDEKQHERLDRRNHERTMNGGQSNVCGICGKPTEVTCDDCEGSFCSECDDKSHRHPERLFHKRSLRSSSSNLMEM
SIO_010081: LOC116957597
subclass of: SO_0000673
so part of: LOC116957597
location: complement(join(1757049..1757209,1760892..1761029,1762328..1762408,1764592..1764610,1765988..1766029,1766398..1766439,1766959..1767867,1768726..1768942,1770851..1771055,1782648..1782813,1783975..1784178,1785944..1786125,1786905..1787042,1789790..1790008,1790942..1791145,1791649..1793208,1803772..1803802,1804877..1804945))
location: region:1757049-1804945:-1
so has part: feature:1804877-1804945:-1:exon
so has part: feature:1803772-1803802:-1:exon
so has part: feature:1791649-1793208:-1:exon
so has part: feature:1790942-1791145:-1:exon
so has part: feature:1789790-1790008:-1:exon
so has part: feature:1786905-1787042:-1:exon
so has part: feature:1785944-1786125:-1:exon
so has part: feature:1783975-1784178:-1:exon
so has part: feature:1782648-1782813:-1:exon
so has part: feature:1770851-1771055:-1:exon
so has part: feature:1768726-1768942:-1:exon
so has part: feature:1766959-1767867:-1:exon
so has part: feature:1766398-1766439:-1:exon
so has part: feature:1765988-1766029:-1:exon
so has part: feature:1764592-1764610:-1:exon
so has part: feature:1762328-1762408:-1:exon
so has part: feature:1760892-1761029:-1:exon
so has part: feature:1757049-1757209:-1:exon

XP_032835730.1
type: Protein
SIO_000068: ncbiprotein

position:1757049:-1
position: 1757049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1804945:-1
position: 1804945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1804877-1804945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1803772-1803802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1791649-1793208:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1790942-1791145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1789790-1790008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1786905-1787042:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1785944-1786125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1783975-1784178:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1782648-1782813:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1770851-1771055:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1768726-1768942:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1766959-1767867:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1766398-1766439:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1765988-1766029:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1764592-1764610:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1762328-1762408:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1760892-1761029:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1757049-1757209:-1:exon

LOC116957597
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G-protein coupled receptor F1-like isoform X2
translation: MAEPEVAPESVMWWSNDTVVVNGSVFTLGVAPGKGPTLTIKGINKKHQGVYSCEACVGTVLVKGSVTLPIILAVPVVDIEQSSLPQISVACSEPTTLTCCLTSLEGNMTVTWKNETVQTSSVTASSLCSTYKATISNPCQDTVYTCTFSNEVGATSYAIAVYYIPTNDKTCPSNYPWPETKRNGVAHVRCPPGYRGTALRRCSADGVWGAIFKNCTSNRFTNVEGKVQLMEDGIGNPTELVPQLLAEMKTITQVPEPSSQEQTLLMGDVRSAHASLDKIIHVASARDVRFNKNVSKDFLDSASNLLDGSVKESWSQLEFMGSMDSSSLLQTTEDFTHLIDAEEFFSSARTLGSKKSREDFNLSSSNILMAGSLYRAGETPTAYHQQFKVDEQTSSVYIDSMAISNLTEKSNLTITSMAFTTLMDLLPLRLAPGLASEASSGPPSVGSLVLSTVLSGAQGGNSSSISMNLALRGVEPGAPLKKTPHCSFWDFKLNGSVGGWSTEGCMTSNITDNAVSCICTHTTPFSILRLPETSQVDLTFAIITYVCLSISNVFLIFAVVLESMLLHQNKRYGQESNGEENDDDHGGHHSLSRGIKLNIICALLLSHVWFMVAISNSNPTVCSLSQFFLHLSYLCAFSWLLVQAIHLLLNGNSIYGGSSGRKVMAATFAGGYGLPVLISVITVAATHSQPDSCWLNWDSSNALFALVIPVLLVIAVDLAVAVYVLLRTRLWDHDGQKLQEGGGLLGDSTTGKAWKLLILMTGLAVIWGVGAYFFMPDGNKIPAVTYLFAVLNAIQGVIVVVFNSLLDEEVKQLLNRSMTIVSYEGMKEKDSPLVVSEYDIENNTVDGVYRLQRPNQVTCAICGGLPEVSCTECKQSFCRGCDEKQHERLDRRNHERTMNGGQSNVCGICGKPTEVTCDDCEGSFCSECDDKSHRHPERLFHKRSLRSSSSNLMEM
SIO_010081: LOC116957597
subclass of: SO_0000673
so part of: LOC116957597
location: complement(join(1757049..1757209,1760892..1761029,1762328..1762408,1764592..1764610,1765988..1766029,1766398..1766439,1766959..1767867,1768726..1768942,1770851..1771055,1782648..1782813,1783975..1784178,1785944..1786125,1786905..1787042,1789790..1790008,1790942..1791086))
location: region:1757049-1791086:-1
so has part: feature:1790942-1791086:-1:exon
so has part: feature:1789790-1790008:-1:exon
so has part: feature:1786905-1787042:-1:exon
so has part: feature:1785944-1786125:-1:exon
so has part: feature:1783975-1784178:-1:exon
so has part: feature:1782648-1782813:-1:exon
so has part: feature:1770851-1771055:-1:exon
so has part: feature:1768726-1768942:-1:exon
so has part: feature:1766959-1767867:-1:exon
so has part: feature:1766398-1766439:-1:exon
so has part: feature:1765988-1766029:-1:exon
so has part: feature:1764592-1764610:-1:exon
so has part: feature:1762328-1762408:-1:exon
so has part: feature:1760892-1761029:-1:exon
so has part: feature:1757049-1757209:-1:exon

XP_032835731.1
type: Protein
SIO_000068: ncbiprotein

position:1791086:-1
position: 1791086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1790942-1791086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1789790-1790008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1786905-1787042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1785944-1786125:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1783975-1784178:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1782648-1782813:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1770851-1771055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1768726-1768942:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1766959-1767867:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1766398-1766439:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1765988-1766029:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1764592-1764610:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1762328-1762408:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1760892-1761029:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1757049-1757209:-1:exon