Petromyzon marinus isolate kPetMar1 chromosome 77, kPetMar1.pri, whole genome shotgun sequence.
type: Entry
definition: Petromyzon marinus isolate kPetMar1 chromosome 77, kPetMar1.pri, whole genome shotgun sequence.
sequence version: NC_046145.1
sequence date: 2020-03-20
sequence: sequence
division: CON
label: NC_046145.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA611764
dblink: SAMN12629506
keyword: WGS
keyword: RefSeq
source: Petromyzon marinus (sea lamprey)
organism: Petromyzon marinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021517.1.\nAssembly name: kPetMar1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/24. The original whole-genome shotgun project has the\naccession JAAIYE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-DEC-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_dups v. github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n scaff10x v. 4.1.0; Bionano Solve DLS v.\n 3.2.1; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. smrtlink_6.0.0.47841;\n longranger align v. 2.2.2; freebayes\n Illumina polishing v. 1.3.1; gEVAL manual\n curation v. 2019-12-09; VGP assembly\n pipeline individual v. 1.6\nAssembly Name :: kPetMar1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 62.36x\nSequencing Technology :: PacBio Sequel I CLR; llumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Petromyzon marinus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 1967688
topology: linear
so has quality: SO_0000987
location: 1..1967688
location: region:1-1967688:1
RO_0002162: 7757

NC_046145
type: RefSeq
SIO_000068: refseq

PRJNA611764
type: BioProject
SIO_000068: bioproject

SAMN12629506
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1967688:1
position: 1967688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1967688:1:source
so part of: sequence
organism: Petromyzon marinus
mol type: genomic DNA
isolate: kPetMar1
chromosome: 77
sex: male
tissue type: sperm
dev stage: adult
country: USA: Great Lakes Fisheries Commission
lat lon: 42.2821 N 83.74847 W
collection date: 12-Jun-2018
collected by: Jeremiah Smith

7757
type: Taxonomy
SIO_000068: taxonomy

LOC116957588
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957588
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10360..23654)
location: region:10360-23654:-1
so has part: feature:10360-23654:-1:exon
subclass of: SO_0000011

116957588
type: Gene
SIO_000068: ncbigene

position:10360:-1
position: 10360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23654:-1
position: 23654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10360-23654:-1:exon

LOC116957588
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957588
product: uncharacterized LOC116957588
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XR_004405203.1
SIO_010081: LOC116957588
subclass of: SO_0000673
so part of: LOC116957588
location: complement(join(10360..10563,12473..12786,16402..16528,23330..23654))
location: region:10360-23654:-1
so has part: feature:23330-23654:-1:exon
so has part: feature:16402-16528:-1:exon
so has part: feature:12473-12786:-1:exon
so has part: feature:10360-10563:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23330-23654:-1:exon

position:23330:-1
position: 23330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16402-16528:-1:exon

position:16402:-1
position: 16402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16528:-1
position: 16528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12473-12786:-1:exon

position:12473:-1
position: 12473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12786:-1
position: 12786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10360-10563:-1:exon

position:10563:-1
position: 10563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHTF8
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: CHTF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 37577..46795
location: region:37577-46795:1
so has part: feature:37577-46795:1:exon
subclass of: SO_0000010

116957559
type: Gene
SIO_000068: ncbigene

position:37577:1
position: 37577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46795:1
position: 46795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37577-46795:1:exon

CHTF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: CHTF8
product: chromosome transmission fidelity factor 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_032979793.1
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(37577..37702,40201..40369,46457..46795)
location: region:37577-46795:1
so has part: feature:37577-37702:1:exon
so has part: feature:40201-40369:1:exon
so has part: feature:46457-46795:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37577-37702:1:exon

position:37702:1
position: 37702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:40201-40369:1:exon

position:40201:1
position: 40201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40369:1
position: 40369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:46457-46795:1:exon

position:46457:1
position: 46457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHTF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: CHTF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromosome transmission fidelity protein 8 homolog
translation: MAVGRRGLDEDWLLVELQGHVVPRGGGGLQSATLGDLHYTRDGIPVLIIGHHILYGKVVSLDKPLAVLVKQQHQQHQQHQQQQHQQEEMDAHPELNSTDVTPSVRTQYLVQALVHTKLLFKTRPKPIITNVPRKV
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(37577..37702,40201..40369,46457..46569)
location: region:37577-46569:1
so has part: feature:37577-37702:1:exon
so has part: feature:40201-40369:1:exon
so has part: feature:46457-46569:1:exon

XP_032835684.1
type: Protein
SIO_000068: ncbiprotein

position:46569:1
position: 46569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37577-37702:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40201-40369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:46457-46569:1:exon

VPS53
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: VPS53
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 51201..159366
location: region:51201-159366:1
so has part: feature:51201-159366:1:exon
subclass of: SO_0000010

116957562
type: Gene
SIO_000068: ncbigene

position:51201:1
position: 51201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159366:1
position: 159366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51201-159366:1:exon

VPS53
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: VPS53
product: VPS53 subunit of GARP complex, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_032979795.1
SIO_010081: VPS53
subclass of: SO_0000673
so part of: VPS53
location: join(51201..51438,54964..55044,60034..60083,61232..61298,62991..63077,67929..68044,71925..72044,73227..73305,74777..74920,77188..77330,81402..81543,86711..86848,90971..91065,97929..98228,100588..100735,103489..103571,110356..110434,124377..124525,131183..131252,140794..140931,149291..149398,158857..159366)
location: region:51201-159366:1
so has part: feature:51201-51438:1:exon
so has part: feature:54964-55044:1:exon
so has part: feature:60034-60083:1:exon
so has part: feature:61232-61298:1:exon
so has part: feature:62991-63077:1:exon
so has part: feature:67929-68044:1:exon
so has part: feature:71925-72044:1:exon
so has part: feature:73227-73305:1:exon
so has part: feature:74777-74920:1:exon
so has part: feature:77188-77330:1:exon
so has part: feature:81402-81543:1:exon
so has part: feature:86711-86848:1:exon
so has part: feature:90971-91065:1:exon
so has part: feature:97929-98228:1:exon
so has part: feature:100588-100735:1:exon
so has part: feature:103489-103571:1:exon
so has part: feature:110356-110434:1:exon
so has part: feature:124377-124525:1:exon
so has part: feature:131183-131252:1:exon
so has part: feature:140794-140931:1:exon
so has part: feature:149291-149398:1:exon
so has part: feature:158857-159366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51201-51438:1:exon

position:51438:1
position: 51438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:54964-55044:1:exon

position:54964:1
position: 54964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55044:1
position: 55044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:60034-60083:1:exon

position:60034:1
position: 60034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60083:1
position: 60083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:61232-61298:1:exon

position:61232:1
position: 61232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61298:1
position: 61298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:62991-63077:1:exon

position:62991:1
position: 62991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63077:1
position: 63077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:67929-68044:1:exon

position:67929:1
position: 67929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68044:1
position: 68044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:71925-72044:1:exon

position:71925:1
position: 71925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72044:1
position: 72044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:73227-73305:1:exon

position:73227:1
position: 73227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73305:1
position: 73305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:74777-74920:1:exon

position:74777:1
position: 74777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74920:1
position: 74920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:77188-77330:1:exon

position:77188:1
position: 77188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77330:1
position: 77330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:81402-81543:1:exon

position:81402:1
position: 81402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81543:1
position: 81543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:86711-86848:1:exon

position:86711:1
position: 86711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86848:1
position: 86848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:90971-91065:1:exon

position:90971:1
position: 90971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91065:1
position: 91065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:97929-98228:1:exon

position:97929:1
position: 97929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98228:1
position: 98228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:100588-100735:1:exon

position:100588:1
position: 100588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100735:1
position: 100735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:103489-103571:1:exon

position:103489:1
position: 103489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103571:1
position: 103571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:110356-110434:1:exon

position:110356:1
position: 110356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110434:1
position: 110434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:124377-124525:1:exon

position:124377:1
position: 124377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124525:1
position: 124525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:131183-131252:1:exon

position:131183:1
position: 131183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131252:1
position: 131252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:140794-140931:1:exon

position:140794:1
position: 140794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140931:1
position: 140931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:149291-149398:1:exon

position:149291:1
position: 149291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149398:1
position: 149398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:158857-159366:1:exon

position:158857:1
position: 158857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VPS53
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: VPS53
product: VPS53 subunit of GARP complex, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_032979797.1
SIO_010081: VPS53
subclass of: SO_0000673
so part of: VPS53
location: join(51201..51438,54964..55044,60034..60083,61232..61298,62991..63077,67929..68044,71925..72044,73227..73305,74777..74920,77188..77330,81402..81543,86711..86848,90971..91065,97929..98228,100588..100735,103489..103571,110356..110434,124377..124525,131183..131252,140794..140931,149291..149398,158857..159130,159321..159366)
location: region:51201-159366:1
so has part: feature:51201-51438:1:exon
so has part: feature:54964-55044:1:exon
so has part: feature:60034-60083:1:exon
so has part: feature:61232-61298:1:exon
so has part: feature:62991-63077:1:exon
so has part: feature:67929-68044:1:exon
so has part: feature:71925-72044:1:exon
so has part: feature:73227-73305:1:exon
so has part: feature:74777-74920:1:exon
so has part: feature:77188-77330:1:exon
so has part: feature:81402-81543:1:exon
so has part: feature:86711-86848:1:exon
so has part: feature:90971-91065:1:exon
so has part: feature:97929-98228:1:exon
so has part: feature:100588-100735:1:exon
so has part: feature:103489-103571:1:exon
so has part: feature:110356-110434:1:exon
so has part: feature:124377-124525:1:exon
so has part: feature:131183-131252:1:exon
so has part: feature:140794-140931:1:exon
so has part: feature:149291-149398:1:exon
so has part: feature:158857-159130:1:exon
so has part: feature:159321-159366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51201-51438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54964-55044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60034-60083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61232-61298:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62991-63077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67929-68044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:71925-72044:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:73227-73305:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:74777-74920:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77188-77330:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81402-81543:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:86711-86848:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:90971-91065:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:97929-98228:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:100588-100735:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:103489-103571:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:110356-110434:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:124377-124525:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:131183-131252:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:140794-140931:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:149291-149398:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:158857-159130:1:exon

position:159130:1
position: 159130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:159321-159366:1:exon

position:159321:1
position: 159321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VPS53
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: VPS53
product: VPS53 subunit of GARP complex, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032979796.1
SIO_010081: VPS53
subclass of: SO_0000673
so part of: VPS53
location: join(51201..51438,54964..55044,60034..60083,61232..61298,62991..63077,67929..68044,71925..72044,73227..73305,74777..74920,77188..77330,81402..81543,86711..86848,90971..91065,97929..98228,100588..100735,103489..103571,110356..110434,124377..124492,125265..125297,131183..131252,140794..140931,149291..149398,158857..159366)
location: region:51201-159366:1
so has part: feature:51201-51438:1:exon
so has part: feature:54964-55044:1:exon
so has part: feature:60034-60083:1:exon
so has part: feature:61232-61298:1:exon
so has part: feature:62991-63077:1:exon
so has part: feature:67929-68044:1:exon
so has part: feature:71925-72044:1:exon
so has part: feature:73227-73305:1:exon
so has part: feature:74777-74920:1:exon
so has part: feature:77188-77330:1:exon
so has part: feature:81402-81543:1:exon
so has part: feature:86711-86848:1:exon
so has part: feature:90971-91065:1:exon
so has part: feature:97929-98228:1:exon
so has part: feature:100588-100735:1:exon
so has part: feature:103489-103571:1:exon
so has part: feature:110356-110434:1:exon
so has part: feature:124377-124492:1:exon
so has part: feature:125265-125297:1:exon
so has part: feature:131183-131252:1:exon
so has part: feature:140794-140931:1:exon
so has part: feature:149291-149398:1:exon
so has part: feature:158857-159366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51201-51438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54964-55044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60034-60083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61232-61298:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62991-63077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67929-68044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:71925-72044:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:73227-73305:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:74777-74920:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77188-77330:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81402-81543:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:86711-86848:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:90971-91065:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:97929-98228:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:100588-100735:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:103489-103571:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:110356-110434:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:124377-124492:1:exon

position:124492:1
position: 124492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:125265-125297:1:exon

position:125265:1
position: 125265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125297:1
position: 125297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:131183-131252:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:140794-140931:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:149291-149398:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:158857-159366:1:exon

VPS53
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: VPS53
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 53 homolog isoform X1
translation: MEEEDADLAVDEELGALLVFSPDVERAIEQVFPSQDPLDQRDFNVVDYINSLFPTEQSLANIDEVVSKIRLKIRRLDEEIRVVVRGQTNVGQDGRQALEEAQRAIQQLFGKIKEIKEKAERSEEMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLVGGVDSLEALTCRRQYGDVRNLLHGVLNVLDHFHKYTAVPQIRQLDERVRAVQSELGTQILNDFEEAFPSHGGKRPAGPSLVLRDACLVADILDSRVRSDIIRKFITQHLSEYLLLFQENQDVAWLDKIDRRYAWAKRQLLEYEEKYGRLFPLHWAMPERIALQFCSITRSELARLMRARSGDLEVKLLLFAIRRTAAFEALLAQRFSGSTLVTGPQTPKLPSAVSGENSFAGAEEAEAEDAEAEEAEAHGESGSQRETELDKPRKALVAESPFHGIICKCFEPHLNVYIESQDRNLTQLIQRFAQEARPPPAPQPPPPPAPQPGGGAGGTGAGGGGAAGGAVLPSCADLFVYYKRCLVQCSQLSRGEALLGLAAVFQKHLQEYATRVLQHILPKTPSGSVGLTISSLLKDRDATDTTRFTADELGLICTVLSTAEYCLATTQQLEEKLKEKVEPSLADKINLVAETDSFSAVISHCIQLLVQDLDSACDPALTAMSKMPWQNVEHVGDQSAYVTSVVGHVKSNVPVVRHCLACTRKYFTQFCLKFASAFIPKFINQLFKCKPVSMVGAEQLLLDTHSLKTALLELPSVGAAVVRKAPAAYTKVVVKGMTRAEMILKLVMSPHEPPQVFVDNFMKLLSDSGAPDTFQRVLDMKGLKRSEQSSMLELLRHRHHHQPGGAGGAGGGGGGGGGGVVPLIPRGGGGAGGGGPPPPHSGAPLGLSAGTSPEQENSRIRRLEKLIKKRL
SIO_010081: VPS53
subclass of: SO_0000673
so part of: VPS53
location: join(51349..51438,54964..55044,60034..60083,61232..61298,62991..63077,67929..68044,71925..72044,73227..73305,74777..74920,77188..77330,81402..81543,86711..86848,90971..91065,97929..98228,100588..100735,103489..103571,110356..110434,124377..124525,131183..131252,140794..140931,149291..149398,158857..159129)
location: region:51349-159129:1
so has part: feature:51349-51438:1:exon
so has part: feature:54964-55044:1:exon
so has part: feature:60034-60083:1:exon
so has part: feature:61232-61298:1:exon
so has part: feature:62991-63077:1:exon
so has part: feature:67929-68044:1:exon
so has part: feature:71925-72044:1:exon
so has part: feature:73227-73305:1:exon
so has part: feature:74777-74920:1:exon
so has part: feature:77188-77330:1:exon
so has part: feature:81402-81543:1:exon
so has part: feature:86711-86848:1:exon
so has part: feature:90971-91065:1:exon
so has part: feature:97929-98228:1:exon
so has part: feature:100588-100735:1:exon
so has part: feature:103489-103571:1:exon
so has part: feature:110356-110434:1:exon
so has part: feature:124377-124525:1:exon
so has part: feature:131183-131252:1:exon
so has part: feature:140794-140931:1:exon
so has part: feature:149291-149398:1:exon
so has part: feature:158857-159129:1:exon

XP_032835686.1
type: Protein
SIO_000068: ncbiprotein

position:51349:1
position: 51349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159129:1
position: 159129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51349-51438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54964-55044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60034-60083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61232-61298:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62991-63077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67929-68044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:71925-72044:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:73227-73305:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:74777-74920:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77188-77330:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81402-81543:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:86711-86848:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:90971-91065:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:97929-98228:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:100588-100735:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:103489-103571:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:110356-110434:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:124377-124525:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:131183-131252:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:140794-140931:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:149291-149398:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:158857-159129:1:exon

VPS53
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: VPS53
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 53 homolog isoform X1
translation: MEEEDADLAVDEELGALLVFSPDVERAIEQVFPSQDPLDQRDFNVVDYINSLFPTEQSLANIDEVVSKIRLKIRRLDEEIRVVVRGQTNVGQDGRQALEEAQRAIQQLFGKIKEIKEKAERSEEMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLVGGVDSLEALTCRRQYGDVRNLLHGVLNVLDHFHKYTAVPQIRQLDERVRAVQSELGTQILNDFEEAFPSHGGKRPAGPSLVLRDACLVADILDSRVRSDIIRKFITQHLSEYLLLFQENQDVAWLDKIDRRYAWAKRQLLEYEEKYGRLFPLHWAMPERIALQFCSITRSELARLMRARSGDLEVKLLLFAIRRTAAFEALLAQRFSGSTLVTGPQTPKLPSAVSGENSFAGAEEAEAEDAEAEEAEAHGESGSQRETELDKPRKALVAESPFHGIICKCFEPHLNVYIESQDRNLTQLIQRFAQEARPPPAPQPPPPPAPQPGGGAGGTGAGGGGAAGGAVLPSCADLFVYYKRCLVQCSQLSRGEALLGLAAVFQKHLQEYATRVLQHILPKTPSGSVGLTISSLLKDRDATDTTRFTADELGLICTVLSTAEYCLATTQQLEEKLKEKVEPSLADKINLVAETDSFSAVISHCIQLLVQDLDSACDPALTAMSKMPWQNVEHVGDQSAYVTSVVGHVKSNVPVVRHCLACTRKYFTQFCLKFASAFIPKFINQLFKCKPVSMVGAEQLLLDTHSLKTALLELPSVGAAVVRKAPAAYTKVVVKGMTRAEMILKLVMSPHEPPQVFVDNFMKLLSDSGAPDTFQRVLDMKGLKRSEQSSMLELLRHRHHHQPGGAGGAGGGGGGGGGGVVPLIPRGGGGAGGGGPPPPHSGAPLGLSAGTSPEQENSRIRRLEKLIKKRL
SIO_010081: VPS53
subclass of: SO_0000673
so part of: VPS53
location: join(51349..51438,54964..55044,60034..60083,61232..61298,62991..63077,67929..68044,71925..72044,73227..73305,74777..74920,77188..77330,81402..81543,86711..86848,90971..91065,97929..98228,100588..100735,103489..103571,110356..110434,124377..124525,131183..131252,140794..140931,149291..149398,158857..159129)
location: region:51349-159129:1
so has part: feature:51349-51438:1:exon
so has part: feature:54964-55044:1:exon
so has part: feature:60034-60083:1:exon
so has part: feature:61232-61298:1:exon
so has part: feature:62991-63077:1:exon
so has part: feature:67929-68044:1:exon
so has part: feature:71925-72044:1:exon
so has part: feature:73227-73305:1:exon
so has part: feature:74777-74920:1:exon
so has part: feature:77188-77330:1:exon
so has part: feature:81402-81543:1:exon
so has part: feature:86711-86848:1:exon
so has part: feature:90971-91065:1:exon
so has part: feature:97929-98228:1:exon
so has part: feature:100588-100735:1:exon
so has part: feature:103489-103571:1:exon
so has part: feature:110356-110434:1:exon
so has part: feature:124377-124525:1:exon
so has part: feature:131183-131252:1:exon
so has part: feature:140794-140931:1:exon
so has part: feature:149291-149398:1:exon
so has part: feature:158857-159129:1:exon

XP_032835688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51349-51438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54964-55044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60034-60083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61232-61298:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62991-63077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67929-68044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:71925-72044:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:73227-73305:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:74777-74920:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77188-77330:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81402-81543:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:86711-86848:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:90971-91065:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:97929-98228:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:100588-100735:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:103489-103571:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:110356-110434:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:124377-124525:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:131183-131252:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:140794-140931:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:149291-149398:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:158857-159129:1:exon

VPS53
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: VPS53
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 53 homolog isoform X2
translation: MEEEDADLAVDEELGALLVFSPDVERAIEQVFPSQDPLDQRDFNVVDYINSLFPTEQSLANIDEVVSKIRLKIRRLDEEIRVVVRGQTNVGQDGRQALEEAQRAIQQLFGKIKEIKEKAERSEEMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLVGGVDSLEALTCRRQYGDVRNLLHGVLNVLDHFHKYTAVPQIRQLDERVRAVQSELGTQILNDFEEAFPSHGGKRPAGPSLVLRDACLVADILDSRVRSDIIRKFITQHLSEYLLLFQENQDVAWLDKIDRRYAWAKRQLLEYEEKYGRLFPLHWAMPERIALQFCSITRSELARLMRARSGDLEVKLLLFAIRRTAAFEALLAQRFSGSTLVTGPQTPKLPSAVSGENSFAGAEEAEAEDAEAEEAEAHGESGSQRETELDKPRKALVAESPFHGIICKCFEPHLNVYIESQDRNLTQLIQRFAQEARPPPAPQPPPPPAPQPGGGAGGTGAGGGGAAGGAVLPSCADLFVYYKRCLVQCSQLSRGEALLGLAAVFQKHLQEYATRVLQHILPKTPSGSVGLTISSLLKDRDATDTTRFTADELGLICTVLSTAEYCLATTQQLEEKLKEKVEPSLADKINLVAETDSFSAVISHCIQLLVQDLDSACDPALTAMSKMPWQNVEHVGDQSAYVTSVVGHVKSNVPVVRHCLACTRKYFTQFCLKFASAFIPKFINQLFKCKPVSMVGAEQLLLDTHSLKTALLELPSVGAAVVRKAPAAYTKVVVKGMTRAEMILKLVMSPHEPPQVFVDNFMKLLSDSGAPDTFQRVLDMKGLKRSEQSSMLELLRHRHHHQPGGAGGAGGGGGGGGGGVVPLIPRGGGGAGGGGPPPPHSGAPLGLSAGTSPEQENSRIRRLEKLIKKRL
SIO_010081: VPS53
subclass of: SO_0000673
so part of: VPS53
location: join(51349..51438,54964..55044,60034..60083,61232..61298,62991..63077,67929..68044,71925..72044,73227..73305,74777..74920,77188..77330,81402..81543,86711..86848,90971..91065,97929..98228,100588..100735,103489..103571,110356..110434,124377..124492,125265..125297,131183..131252,140794..140931,149291..149398,158857..159129)
location: region:51349-159129:1
so has part: feature:51349-51438:1:exon
so has part: feature:54964-55044:1:exon
so has part: feature:60034-60083:1:exon
so has part: feature:61232-61298:1:exon
so has part: feature:62991-63077:1:exon
so has part: feature:67929-68044:1:exon
so has part: feature:71925-72044:1:exon
so has part: feature:73227-73305:1:exon
so has part: feature:74777-74920:1:exon
so has part: feature:77188-77330:1:exon
so has part: feature:81402-81543:1:exon
so has part: feature:86711-86848:1:exon
so has part: feature:90971-91065:1:exon
so has part: feature:97929-98228:1:exon
so has part: feature:100588-100735:1:exon
so has part: feature:103489-103571:1:exon
so has part: feature:110356-110434:1:exon
so has part: feature:124377-124492:1:exon
so has part: feature:125265-125297:1:exon
so has part: feature:131183-131252:1:exon
so has part: feature:140794-140931:1:exon
so has part: feature:149291-149398:1:exon
so has part: feature:158857-159129:1:exon

XP_032835687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51349-51438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54964-55044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60034-60083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61232-61298:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62991-63077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67929-68044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:71925-72044:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:73227-73305:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:74777-74920:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77188-77330:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81402-81543:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:86711-86848:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:90971-91065:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:97929-98228:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:100588-100735:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:103489-103571:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:110356-110434:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:124377-124492:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:125265-125297:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:131183-131252:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:140794-140931:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:149291-149398:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:158857-159129:1:exon

LOC116957585
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(171517..186347)
location: region:171517-186347:-1
so has part: feature:171517-186347:-1:exon
subclass of: SO_0000010

116957585
type: Gene
SIO_000068: ncbigene

position:171517:-1
position: 171517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186347:-1
position: 186347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171517-186347:-1:exon

LOC116957585
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957585
product: zinc finger protein 664-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032979822.1
SIO_010081: LOC116957585
subclass of: SO_0000673
so part of: LOC116957585
location: complement(join(171517..172553,180515..180588,186295..186347))
location: region:171517-186347:-1
so has part: feature:186295-186347:-1:exon
so has part: feature:180515-180588:-1:exon
so has part: feature:171517-172553:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186295-186347:-1:exon

position:186295:-1
position: 186295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:180515-180588:-1:exon

position:180515:-1
position: 180515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180588:-1
position: 180588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:171517-172553:-1:exon

position:172553:-1
position: 172553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957585
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957585
product: zinc finger protein 664-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032979824.1
SIO_010081: LOC116957585
subclass of: SO_0000673
so part of: LOC116957585
location: complement(join(171517..172553,180515..180588,180800..180911,186295..186346))
location: region:171517-186346:-1
so has part: feature:186295-186346:-1:exon
so has part: feature:180800-180911:-1:exon
so has part: feature:180515-180588:-1:exon
so has part: feature:171517-172553:-1:exon

position:186346:-1
position: 186346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186295-186346:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180800-180911:-1:exon

position:180800:-1
position: 180800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180911:-1
position: 180911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:180515-180588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171517-172553:-1:exon

LOC116957585
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957585
product: zinc finger protein 664-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_032979825.1
SIO_010081: LOC116957585
subclass of: SO_0000673
so part of: LOC116957585
location: complement(join(171517..172553,180515..180588,180800..181221))
location: region:171517-181221:-1
so has part: feature:180800-181221:-1:exon
so has part: feature:180515-180588:-1:exon
so has part: feature:171517-172553:-1:exon

position:181221:-1
position: 181221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180800-181221:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180515-180588:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171517-172553:-1:exon

LOC116957585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 664-like
translation: MNVQKSRIGLMEQRHSAQLCAKRQQCDRCAYSTDRAVNLIEHQRTHTGEKPFKCSACEMAFAWSSNLKKHERTHTGEKPFKCAVCGKAFARSSVLQSHQRTHTGEKPFKCTVCDKAFSQSTILQSHQRTHTGEKPFTCSVCGKAFSVSATLKNHQRTHTGDKPFKCTLCGKAFSQSPHLQRHQITHKHQRTPNEWSLKSVCVSPSAAMSPSLMKQEPEETPALNGIKVKCEEVKCEEVTVGSEEVKIKCEDEDSNPQSYLHMDEGDVKQEENSDCEAERGNSQQFVEVEVWVDFLDNAKSNGDPVDVEA
SIO_010081: LOC116957585
subclass of: SO_0000673
so part of: LOC116957585
location: complement(join(171644..172553,180515..180534))
location: region:171644-180534:-1
so has part: feature:180515-180534:-1:exon
so has part: feature:171644-172553:-1:exon

XP_032835713.1
type: Protein
SIO_000068: ncbiprotein

position:171644:-1
position: 171644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180534:-1
position: 180534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180515-180534:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:171644-172553:-1:exon

LOC116957585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 664-like
translation: MNVQKSRIGLMEQRHSAQLCAKRQQCDRCAYSTDRAVNLIEHQRTHTGEKPFKCSACEMAFAWSSNLKKHERTHTGEKPFKCAVCGKAFARSSVLQSHQRTHTGEKPFKCTVCDKAFSQSTILQSHQRTHTGEKPFTCSVCGKAFSVSATLKNHQRTHTGDKPFKCTLCGKAFSQSPHLQRHQITHKHQRTPNEWSLKSVCVSPSAAMSPSLMKQEPEETPALNGIKVKCEEVKCEEVTVGSEEVKIKCEDEDSNPQSYLHMDEGDVKQEENSDCEAERGNSQQFVEVEVWVDFLDNAKSNGDPVDVEA
SIO_010081: LOC116957585
subclass of: SO_0000673
so part of: LOC116957585
location: complement(join(171644..172553,180515..180534))
location: region:171644-180534:-1
so has part: feature:180515-180534:-1:exon
so has part: feature:171644-172553:-1:exon

XP_032835715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180515-180534:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:171644-172553:-1:exon

LOC116957585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 664-like
translation: MNVQKSRIGLMEQRHSAQLCAKRQQCDRCAYSTDRAVNLIEHQRTHTGEKPFKCSACEMAFAWSSNLKKHERTHTGEKPFKCAVCGKAFARSSVLQSHQRTHTGEKPFKCTVCDKAFSQSTILQSHQRTHTGEKPFTCSVCGKAFSVSATLKNHQRTHTGDKPFKCTLCGKAFSQSPHLQRHQITHKHQRTPNEWSLKSVCVSPSAAMSPSLMKQEPEETPALNGIKVKCEEVKCEEVTVGSEEVKIKCEDEDSNPQSYLHMDEGDVKQEENSDCEAERGNSQQFVEVEVWVDFLDNAKSNGDPVDVEA
SIO_010081: LOC116957585
subclass of: SO_0000673
so part of: LOC116957585
location: complement(join(171644..172553,180515..180534))
location: region:171644-180534:-1
so has part: feature:180515-180534:-1:exon
so has part: feature:171644-172553:-1:exon

XP_032835716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180515-180534:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:171644-172553:-1:exon

LOC116957585
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7757
gene: LOC116957585
product: zinc finger protein 664-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004405200.1
SIO_010081: LOC116957585
so part of: LOC116957585
location: complement(join(172530..172584,180515..180588,180800..180911,186295..186346))
location: region:172530-186346:-1
so has part: feature:186295-186346:-1:exon
so has part: feature:180800-180911:-1:exon
so has part: feature:180515-180588:-1:exon
so has part: feature:172530-172584:-1:exon

position:172530:-1
position: 172530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186295-186346:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180800-180911:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:180515-180588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172530-172584:-1:exon

position:172584:-1
position: 172584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957585
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7757
gene: LOC116957585
product: zinc finger protein 664-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XR_004405201.1
SIO_010081: LOC116957585
so part of: LOC116957585
location: complement(join(172533..172584,180515..180588,186295..186329))
location: region:172533-186329:-1
so has part: feature:186295-186329:-1:exon
so has part: feature:180515-180588:-1:exon
so has part: feature:172533-172584:-1:exon

position:172533:-1
position: 172533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186329:-1
position: 186329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186295-186329:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180515-180588:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172533-172584:-1:exon

LOC116957591
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957591
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(265924..276641)
location: region:265924-276641:-1
so has part: feature:265924-276641:-1:exon
subclass of: SO_0000010

116957591
type: Gene
SIO_000068: ncbigene

position:265924:-1
position: 265924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276641:-1
position: 276641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265924-276641:-1:exon

LOC116957591
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957591
product: zinc finger protein ZIC 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032979833.1
SIO_010081: LOC116957591
subclass of: SO_0000673
so part of: LOC116957591
location: complement(join(265924..266555,268363..268495,276540..276641))
location: region:265924-276641:-1
so has part: feature:276540-276641:-1:exon
so has part: feature:268363-268495:-1:exon
so has part: feature:265924-266555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:276540-276641:-1:exon

position:276540:-1
position: 276540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:268363-268495:-1:exon

position:268363:-1
position: 268363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268495:-1
position: 268495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:265924-266555:-1:exon

position:266555:-1
position: 266555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957591
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957591
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZIC 2-like
translation: MAAVPESSSRPPPPAMAPRAPRGKRGSTSLQHDTVVSAEVEREQDADDAVQPSTALPLQLCDHLQLHPLHLHLGGVGGIGGGSGGAGGDGRGGGGNGGDGGSGGGGGGSGNGGGASGGGAEVAALVVVMVVVLARHRSSSMRRFSSSTLFTLARHFSSTRRFSSVKHFTLTRRFLRK
SIO_010081: LOC116957591
subclass of: SO_0000673
so part of: LOC116957591
location: complement(join(266242..266555,268363..268495,276540..276626))
location: region:266242-276626:-1
so has part: feature:276540-276626:-1:exon
so has part: feature:268363-268495:-1:exon
so has part: feature:266242-266555:-1:exon

XP_032835724.1
type: Protein
SIO_000068: ncbiprotein

position:266242:-1
position: 266242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276626:-1
position: 276626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276540-276626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268363-268495:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266242-266555:-1:exon

LOC116957590
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(279630..296773)
location: region:279630-296773:-1
so has part: feature:279630-296773:-1:exon
subclass of: SO_0000010

116957590
type: Gene
SIO_000068: ncbigene

position:279630:-1
position: 279630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296773:-1
position: 296773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279630-296773:-1:exon

LOC116957590
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957590
product: zinc-binding protein A33-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032979832.1
SIO_010081: LOC116957590
subclass of: SO_0000673
so part of: LOC116957590
location: complement(join(279630..282774,292418..292533,293914..293936,295614..295847,296541..296773))
location: region:279630-296773:-1
so has part: feature:296541-296773:-1:exon
so has part: feature:295614-295847:-1:exon
so has part: feature:293914-293936:-1:exon
so has part: feature:292418-292533:-1:exon
so has part: feature:279630-282774:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296541-296773:-1:exon

position:296541:-1
position: 296541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295614-295847:-1:exon

position:295614:-1
position: 295614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295847:-1
position: 295847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:293914-293936:-1:exon

position:293914:-1
position: 293914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293936:-1
position: 293936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:292418-292533:-1:exon

position:292418:-1
position: 292418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292533:-1
position: 292533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:279630-282774:-1:exon

position:282774:-1
position: 282774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957590
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957590
product: zinc-binding protein A33-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032979831.1
SIO_010081: LOC116957590
subclass of: SO_0000673
so part of: LOC116957590
location: complement(join(279630..282774,292418..293089))
location: region:279630-293089:-1
so has part: feature:292418-293089:-1:exon
so has part: feature:279630-282774:-1:exon

position:293089:-1
position: 293089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292418-293089:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279630-282774:-1:exon

LOC116957590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc-binding protein A33-like isoform X2
translation: MMFGRESRLPTDLLFGVPPPQWEEGSRPVEHLMGTLREARVRAYPQGETAHRRQERGAQPRMEPPFYSAGSKESLRGATARISREFERRREQLREEERKALQRVDEEGRYVLSSIQADIARYESRARGLEQEINQLLPALNVQDPLSFLQDSVHENLRRSSVSQETQDDPAPISCGLNLAKVISVGGVQTKLLSFLGGRSPTLDTNSAHNRLQISSDLRTVMVSGVPQSRPHHPHRFDVWGQALCSESFSSGQHYWEVDVGSVELCRVGVAYGTIPRRGSGDECLLGGNDVSWCLQKLGDSFSVHHGGVVTSLSVPEPQGRVGVHLDWDAGLLSFYSADSMAPLHSFHQTFDQPLHPGLLVGWGKFGDSVRIVDLSGAS
SIO_010081: LOC116957590
subclass of: SO_0000673
so part of: LOC116957590
location: complement(join(282224..282774,292418..292533,293914..293936,295614..295847,296541..296756))
location: region:282224-296756:-1
so has part: feature:296541-296756:-1:exon
so has part: feature:295614-295847:-1:exon
so has part: feature:293914-293936:-1:exon
so has part: feature:292418-292533:-1:exon
so has part: feature:282224-282774:-1:exon

XP_032835723.1
type: Protein
SIO_000068: ncbiprotein

position:282224:-1
position: 282224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296756:-1
position: 296756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296541-296756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295614-295847:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293914-293936:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:292418-292533:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282224-282774:-1:exon

LOC116957590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc-binding protein A33-like isoform X1
translation: MYQLYLPHFHTHTQCSYTRKHSQHEADSLYLAENRSSVLQFSLQLRDCTLNECYFLYNGSWFVSTGVRKSRVPVLSICRETWTINRLCVSRAVRRETWTLMRLCVSHAVSVDRHGSSLDCVSCCVCRETWTLIRLCVSRAVSVERLGPSLESVSVLCCECRRSSVSQETQDDPAPISCGLNLAKVISVGGVQTKLLSFLGGRSPTLDTNSAHNRLQISSDLRTVMVSGVPQSRPHHPHRFDVWGQALCSESFSSGQHYWEVDVGSVELCRVGVAYGTIPRRGSGDECLLGGNDVSWCLQKLGDSFSVHHGGVVTSLSVPEPQGRVGVHLDWDAGLLSFYSADSMAPLHSFHQTFDQPLHPGLLVGWGKFGDSVRIVDLSGAS
SIO_010081: LOC116957590
subclass of: SO_0000673
so part of: LOC116957590
location: complement(join(282224..282774,292418..293015))
location: region:282224-293015:-1
so has part: feature:292418-293015:-1:exon
so has part: feature:282224-282774:-1:exon

XP_032835722.1
type: Protein
SIO_000068: ncbiprotein

position:293015:-1
position: 293015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292418-293015:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282224-282774:-1:exon

LOC116957589
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 330219..341374
location: region:330219-341374:1
so has part: feature:330219-341374:1:exon
subclass of: SO_0000010

116957589
type: Gene
SIO_000068: ncbigene

position:330219:1
position: 330219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341374:1
position: 341374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330219-341374:1:exon

LOC116957589
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957589
product: E3 ubiquitin/ISG15 ligase TRIM25-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_032979829.1
SIO_010081: LOC116957589
subclass of: SO_0000673
so part of: LOC116957589
location: join(330219..331205,331749..331844,333723..333956,334080..334102,334442..334542,338734..341374)
location: region:330219-341374:1
so has part: feature:330219-331205:1:exon
so has part: feature:331749-331844:1:exon
so has part: feature:333723-333956:1:exon
so has part: feature:334080-334102:1:exon
so has part: feature:334442-334542:1:exon
so has part: feature:338734-341374:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:330219-331205:1:exon

position:331205:1
position: 331205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:331749-331844:1:exon

position:331749:1
position: 331749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331844:1
position: 331844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:333723-333956:1:exon

position:333723:1
position: 333723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333956:1
position: 333956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:334080-334102:1:exon

position:334080:1
position: 334080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334102:1
position: 334102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:334442-334542:1:exon

position:334442:1
position: 334442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334542:1
position: 334542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:338734-341374:1:exon

position:338734:1
position: 338734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957589
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957589
product: E3 ubiquitin/ISG15 ligase TRIM25-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_032979828.1
SIO_010081: LOC116957589
subclass of: SO_0000673
so part of: LOC116957589
location: join(330221..331205,331749..331844,333723..333956,334080..334102,334439..334542,338734..341374)
location: region:330221-341374:1
so has part: feature:330221-331205:1:exon
so has part: feature:331749-331844:1:exon
so has part: feature:333723-333956:1:exon
so has part: feature:334080-334102:1:exon
so has part: feature:334439-334542:1:exon
so has part: feature:338734-341374:1:exon

position:330221:1
position: 330221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330221-331205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331749-331844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333723-333956:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:334080-334102:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334439-334542:1:exon

position:334439:1
position: 334439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:338734-341374:1:exon

LOC116957589
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
translation: MATATPSESVDSELRCSICLDTFVCPSTLSCGHSFCLRCLEAAWETGSSFSCPQCRATFPVRPQLRRNVALANLAEQLRVRFGMATAVFCDNCGDGHTPAVKTCLRCEMSYCFSHFRPHLKNPRLRDHAVVDPNAILDERRCPNHKRELEFYCTIDNSLVCSTCIIADEHTGHKILTVKDEHEARKTRAGKEMRTVEEKRKKAEESVKRMEAARKEAQESVAEIRDRITGKFAHLRKALDEDEREALCRVAVKERELLSRIEEDIARHKREIGELKAAAAHLRALQHEMNSLAFLQGHLEVTRRREIPKESAPPPPTSLDVTTIRCLERVMRRLLPLVCGRSPTLDTNSAHNRLQISSDLRTVMVSGVPQSRPHHPHRFDVWGQALCSESFSSGQHYWEVDVGSVELCRVGVAYGTIPRRGSGDECLLGGNDVSWCLQKLGDSFSVHHGGVVTSLSVRQPPRRVGVHLDWDAGLLSFYSADSMAPLHSFHQTFAQPLHPGLLVGWGKFGDSVRIVDLSGAS
SIO_010081: LOC116957589
subclass of: SO_0000673
so part of: LOC116957589
location: join(330648..331205,331749..331844,333723..333956,334080..334102,334439..334542,338734..339284)
location: region:330648-339284:1
so has part: feature:330648-331205:1:exon
so has part: feature:331749-331844:1:exon
so has part: feature:333723-333956:1:exon
so has part: feature:334080-334102:1:exon
so has part: feature:334439-334542:1:exon
so has part: feature:338734-339284:1:exon

XP_032835719.1
type: Protein
SIO_000068: ncbiprotein

position:330648:1
position: 330648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339284:1
position: 339284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330648-331205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331749-331844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333723-333956:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:334080-334102:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334439-334542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338734-339284:1:exon

LOC116957589
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin/ISG15 ligase TRIM25-like isoform X2
translation: MATATPSESVDSELRCSICLDTFVCPSTLSCGHSFCLRCLEAAWETGSSFSCPQCRATFPVRPQLRRNVALANLAEQLRVRFGMATAVFCDNCGDGHTPAVKTCLRCEMSYCFSHFRPHLKNPRLRDHAVVDPNAILDERRCPNHKRELEFYCTIDNSLVCSTCIIADEHTGHKILTVKDEHEARKTRAGKEMRTVEEKRKKAEESVKRMEAARKEAQESVAEIRDRITGKFAHLRKALDEDEREALCRVAVKERELLSRIEEDIARHKREIGELKAAAAHLRALQHEMNSLAFLQGHLEVTRREIPKESAPPPPTSLDVTTIRCLERVMRRLLPLVCGRSPTLDTNSAHNRLQISSDLRTVMVSGVPQSRPHHPHRFDVWGQALCSESFSSGQHYWEVDVGSVELCRVGVAYGTIPRRGSGDECLLGGNDVSWCLQKLGDSFSVHHGGVVTSLSVRQPPRRVGVHLDWDAGLLSFYSADSMAPLHSFHQTFAQPLHPGLLVGWGKFGDSVRIVDLSGAS
SIO_010081: LOC116957589
subclass of: SO_0000673
so part of: LOC116957589
location: join(330648..331205,331749..331844,333723..333956,334080..334102,334442..334542,338734..339284)
location: region:330648-339284:1
so has part: feature:330648-331205:1:exon
so has part: feature:331749-331844:1:exon
so has part: feature:333723-333956:1:exon
so has part: feature:334080-334102:1:exon
so has part: feature:334442-334542:1:exon
so has part: feature:338734-339284:1:exon

XP_032835720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330648-331205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331749-331844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333723-333956:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:334080-334102:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334442-334542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338734-339284:1:exon

LOC116957583
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(424533..434948)
location: region:424533-434948:-1
so has part: feature:424533-434948:-1:exon
subclass of: SO_0000011

116957583
type: Gene
SIO_000068: ncbigene

position:424533:-1
position: 424533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434948:-1
position: 434948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424533-434948:-1:exon

LOC116957583
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957583
product: uncharacterized LOC116957583
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004405198.1
SIO_010081: LOC116957583
subclass of: SO_0000673
so part of: LOC116957583
location: complement(join(424533..428943,429153..429287,429631..429795,432857..432987,434765..434948))
location: region:424533-434948:-1
so has part: feature:434765-434948:-1:exon
so has part: feature:432857-432987:-1:exon
so has part: feature:429631-429795:-1:exon
so has part: feature:429153-429287:-1:exon
so has part: feature:424533-428943:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:434765-434948:-1:exon

position:434765:-1
position: 434765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:432857-432987:-1:exon

position:432857:-1
position: 432857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432987:-1
position: 432987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:429631-429795:-1:exon

position:429631:-1
position: 429631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429795:-1
position: 429795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:429153-429287:-1:exon

position:429153:-1
position: 429153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429287:-1
position: 429287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:424533-428943:-1:exon

position:428943:-1
position: 428943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957564
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957564
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 442107..469510
location: region:442107-469510:1
so has part: feature:442107-469510:1:exon
subclass of: SO_0000011

116957564
type: Gene
SIO_000068: ncbigene

position:442107:1
position: 442107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469510:1
position: 469510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442107-469510:1:exon

LOC116957564
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957564
product: uncharacterized LOC116957564, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XR_004405195.1
SIO_010081: LOC116957564
subclass of: SO_0000673
so part of: LOC116957564
location: join(442107..442170,442566..442688,444311..444403,463212..463306,465109..465167,468739..469510)
location: region:442107-469510:1
so has part: feature:442107-442170:1:exon
so has part: feature:442566-442688:1:exon
so has part: feature:444311-444403:1:exon
so has part: feature:463212-463306:1:exon
so has part: feature:465109-465167:1:exon
so has part: feature:468739-469510:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:442107-442170:1:exon

position:442170:1
position: 442170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:442566-442688:1:exon

position:442566:1
position: 442566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442688:1
position: 442688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:444311-444403:1:exon

position:444311:1
position: 444311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444403:1
position: 444403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:463212-463306:1:exon

position:463212:1
position: 463212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463306:1
position: 463306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:465109-465167:1:exon

position:465109:1
position: 465109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465167:1
position: 465167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:468739-469510:1:exon

position:468739:1
position: 468739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957564
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957564
product: uncharacterized LOC116957564, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XR_004405196.1
SIO_010081: LOC116957564
subclass of: SO_0000673
so part of: LOC116957564
location: join(442110..442170,442584..442688,444311..444403,463212..463306,465109..465167,468739..469510)
location: region:442110-469510:1
so has part: feature:442110-442170:1:exon
so has part: feature:442584-442688:1:exon
so has part: feature:444311-444403:1:exon
so has part: feature:463212-463306:1:exon
so has part: feature:465109-465167:1:exon
so has part: feature:468739-469510:1:exon

position:442110:1
position: 442110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442110-442170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442584-442688:1:exon

position:442584:1
position: 442584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:444311-444403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463212-463306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:465109-465167:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:468739-469510:1:exon

LOC116957573
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957573
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 491321..498132
location: region:491321-498132:1
so has part: feature:491321-498132:1:exon
subclass of: SO_0000010

116957573
type: Gene
SIO_000068: ncbigene

position:491321:1
position: 491321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498132:1
position: 498132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491321-498132:1:exon

LOC116957573
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957573
product: zinc finger protein 239-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032979813.1
SIO_010081: LOC116957573
subclass of: SO_0000673
so part of: LOC116957573
location: join(491321..491793,494550..495504,498106..498132)
location: region:491321-498132:1
so has part: feature:491321-491793:1:exon
so has part: feature:494550-495504:1:exon
so has part: feature:498106-498132:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:491321-491793:1:exon

position:491793:1
position: 491793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:494550-495504:1:exon

position:494550:1
position: 494550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495504:1
position: 495504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:498106-498132:1:exon

position:498106:1
position: 498106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957573
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957573
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MEQRHSAQLGTKRQQYNQCAYSTDQTGHLTQHQRTRTGEKPFKCTVCDKAFAWSSGLHNHQRTHTGEKPFKCSVCGKSFSQSSGLVLHQRTHSGEKPFRCTLCGKAFSQSAGILLHQRTHTGEKPFKCSLCGKAFSQSSSLVLHQRIHTGEKPFRCSLCGKAFAQSSGLVLHQRTHTGKKPFRCTLCGKAFSQSSALVLHQRTHTGEKPFKCSLCGKAFSQSSSLVLHQRTHTGEKPFRCTVCGKAFSGLSNLKTHQRTYNHQKIPKEWSLKSACESQSAALTPSLMKQELNPSLDTFKGIKVKCEEAKLLEDEGGW
SIO_010081: LOC116957573
subclass of: SO_0000673
so part of: LOC116957573
location: join(494578..495504,498106..498132)
location: region:494578-498132:1
so has part: feature:494578-495504:1:exon
so has part: feature:498106-498132:1:exon

XP_032835704.1
type: Protein
SIO_000068: ncbiprotein

position:494578:1
position: 494578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494578-495504:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:498106-498132:1:exon

LOC116957574
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 510557..542142
location: region:510557-542142:1
so has part: feature:510557-542142:1:exon
subclass of: SO_0000010

116957574
type: Gene
SIO_000068: ncbigene

position:510557:1
position: 510557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542142:1
position: 542142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510557-542142:1:exon

LOC116957574
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957574
product: zinc finger protein OZF-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032979814.1
SIO_010081: LOC116957574
subclass of: SO_0000673
so part of: LOC116957574
location: join(510557..510842,517718..518337,528826..528939,529864..530386,542088..542142)
location: region:510557-542142:1
so has part: feature:510557-510842:1:exon
so has part: feature:517718-518337:1:exon
so has part: feature:528826-528939:1:exon
so has part: feature:529864-530386:1:exon
so has part: feature:542088-542142:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510557-510842:1:exon

position:510842:1
position: 510842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:517718-518337:1:exon

position:517718:1
position: 517718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518337:1
position: 518337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:528826-528939:1:exon

position:528826:1
position: 528826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528939:1
position: 528939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:529864-530386:1:exon

position:529864:1
position: 529864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530386:1
position: 530386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:542088-542142:1:exon

position:542088:1
position: 542088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957574
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein OZF-like
translation: MTSRVAGKLLFRARARRCPSCHFLCRIVLMEQRRSAQLGAKRKQCDQCAYSTDRPVRLTQHQRTHTGEKPFKCTLCEKGFAWPSVLQSHQRTHTGEKPFRCTLCGKAFAQSPHLQIHQRTHTGEKPFKCSVCGKAFSDSSALKKHQRTHTGEKPFKCSVCGKAFSQSSGLVLHQRTHTGEKPFRCTLCGKAFAVSSHLKQHQRTHTKEKPFKCTVCEKAFAWLSGLNLTQHKRTHTGEKPFKCTVCDKAFARSSVLQNHQRTHTGEKPFRCTLCGKVFAQQPHLQTHQRTHTGEKPFRCSVCGKAFAKSSALVLHKRTHTGEKPFRCSLCGKAFAKSSALVLHKRTHTGEKPFRCTLCGKAFAQSSDLKRHQRAHTGEKPFRCTLCEKVFAWSSDLKQHQRTHTKEKPFKCTVCEKAFAWPAVLQNHQRTHTGEKPFWWVKWRAMFTALSTDLLAL
SIO_010081: LOC116957574
subclass of: SO_0000673
so part of: LOC116957574
location: join(510784..510842,517718..518337,528826..528939,529864..530386,542088..542142)
location: region:510784-542142:1
so has part: feature:510784-510842:1:exon
so has part: feature:517718-518337:1:exon
so has part: feature:528826-528939:1:exon
so has part: feature:529864-530386:1:exon
so has part: feature:542088-542142:1:exon

XP_032835705.1
type: Protein
SIO_000068: ncbiprotein

position:510784:1
position: 510784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510784-510842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517718-518337:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528826-528939:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529864-530386:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542088-542142:1:exon

LOC116957579
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 536925..570031
location: region:536925-570031:1
so has part: feature:536925-570031:1:exon
subclass of: SO_0000010

116957579
type: Gene
SIO_000068: ncbigene

position:536925:1
position: 536925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570031:1
position: 570031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536925-570031:1:exon

LOC116957579
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957579
product: zinc finger protein 271-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032979820.1
SIO_010081: LOC116957579
subclass of: SO_0000673
so part of: LOC116957579
location: join(536925..537435,547999..549032,569168..570031)
location: region:536925-570031:1
so has part: feature:536925-537435:1:exon
so has part: feature:547999-549032:1:exon
so has part: feature:569168-570031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:536925-537435:1:exon

position:537435:1
position: 537435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:547999-549032:1:exon

position:547999:1
position: 547999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549032:1
position: 549032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:569168-570031:1:exon

position:569168:1
position: 569168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957579
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 271-like
translation: MEQRHSARLGSKRQQYDQCAYSTDQTGHLTQHKRTHTGEKPFKCTVCDKAFVRSSVLQNHQRTHTGEKPFKCSLCGKAFSHSSALVLHQRTHTGEKPFRCSLCGKAFAQSSALVLHKRTHTGEKPFRCTLCGKAFAQQPHLQTHQRTHTGEKPFKCSLCGKAFSDSSGRVLHQRTHTGEKPFRCSLCGKAYAQSSALVLHKRTHTGEKPFRCTLCRKAFAQSSDLKKHQRTHTKEKPFKCTVCEKAFAWPSVLQNHQKTHTGEKPFRCTLCGKAFAQSSHLQYHQRTHTGEKPFRCTLCGKAFAQSSALVLHQSTHTGEKPFRCTPCGMAFARSSDLTQHKRTHTGEKPFKCTVCDKAFARSSVLQRHQRTHTGEKPFTCTLCGKAFAQSSGLVLHQRTHTGEKPFRCTLCGKAFAQSPHLKIHKRTHTGEKPFRCSLCGKAFSQSSALVLHQRTHTGEKPFRCTLCGKEFAVSSHLKQHQRTHTKEKPFKCTVCEKAFAWPAVLQNHQRTHTGEKPFRCTLCGKAFSQSSGLVLHQRTHTGEKPFRCTLCGKAFAGLSNLKTHQRAHNHQKIPKEWSLKSACESQSAA
SIO_010081: LOC116957579
subclass of: SO_0000673
so part of: LOC116957579
location: join(548027..549032,569168..569931)
location: region:548027-569931:1
so has part: feature:548027-549032:1:exon
so has part: feature:569168-569931:1:exon

XP_032835711.1
type: Protein
SIO_000068: ncbiprotein

position:548027:1
position: 548027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569931:1
position: 569931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548027-549032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:569168-569931:1:exon

LOC116957580
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 552478..555062
location: region:552478-555062:1
so has part: feature:552478-555062:1:exon
subclass of: SO_0000011

116957580
type: Gene
SIO_000068: ncbigene

position:552478:1
position: 552478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555062:1
position: 555062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552478-555062:1:exon

LOC116957580
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957580
product: uncharacterized LOC116957580
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XR_004405197.1
SIO_010081: LOC116957580
subclass of: SO_0000673
so part of: LOC116957580
location: join(552478..552537,553758..555062)
location: region:552478-555062:1
so has part: feature:552478-552537:1:exon
so has part: feature:553758-555062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:552478-552537:1:exon

position:552537:1
position: 552537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:553758-555062:1:exon

position:553758:1
position: 553758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL23A
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: RPL23A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(599563..604295)
location: region:599563-604295:-1
so has part: feature:599563-604295:-1:exon
subclass of: SO_0000010

116957565
type: Gene
SIO_000068: ncbigene

position:599563:-1
position: 599563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604295:-1
position: 604295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599563-604295:-1:exon

RPL23A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: RPL23A
product: ribosomal protein L23a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_032979800.1
SIO_010081: RPL23A
subclass of: SO_0000673
so part of: RPL23A
location: complement(join(599563..599616,600335..600404,600570..600746,601258..601648,604160..604295))
location: region:599563-604295:-1
so has part: feature:604160-604295:-1:exon
so has part: feature:601258-601648:-1:exon
so has part: feature:600570-600746:-1:exon
so has part: feature:600335-600404:-1:exon
so has part: feature:599563-599616:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:604160-604295:-1:exon

position:604160:-1
position: 604160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:601258-601648:-1:exon

position:601258:-1
position: 601258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601648:-1
position: 601648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:600570-600746:-1:exon

position:600570:-1
position: 600570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600746:-1
position: 600746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:600335-600404:-1:exon

position:600335:-1
position: 600335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600404:-1
position: 600404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:599563-599616:-1:exon

position:599616:-1
position: 599616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPL23A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: RPL23A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L23a
translation: MAPKPRKEAAAAAPAKPEGAKPEGAKGKGGKGRPEGGKGRPEGGKAREGGKARAEGGKARGAEGAKARGAEGGKARGTEARPKGEARAKALKAKKAVLRGVHAVRRRKVHTSPTFRRPHTLRLRRQPKYPRKSAPTRNKMDHYAIIKFPLTTEAAMKKIEDNNTLVFITDVRANKHQIKLAVKKLYNIGVMKVNTLIRPDGEKKAYVRLTPDFDALDVANKIGII
SIO_010081: RPL23A
subclass of: SO_0000673
so part of: RPL23A
location: complement(join(599602..599616,600335..600404,600570..600746,601258..601648,604160..604184))
location: region:599602-604184:-1
so has part: feature:604160-604184:-1:exon
so has part: feature:601258-601648:-1:exon
so has part: feature:600570-600746:-1:exon
so has part: feature:600335-600404:-1:exon
so has part: feature:599602-599616:-1:exon

XP_032835691.1
type: Protein
SIO_000068: ncbiprotein

position:599602:-1
position: 599602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604184:-1
position: 604184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604160-604184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:601258-601648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:600570-600746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:600335-600404:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:599602-599616:-1:exon

LOC116957575
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 617667..628283
location: region:617667-628283:1
so has part: feature:617667-628283:1:exon
subclass of: SO_0000010

116957575
type: Gene
SIO_000068: ncbigene

position:617667:1
position: 617667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628283:1
position: 628283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617667-628283:1:exon

LOC116957575
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957575
product: 5-hydroxytryptamine receptor 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032979815.1
SIO_010081: LOC116957575
subclass of: SO_0000673
so part of: LOC116957575
location: join(617667..617672,626835..627214,627324..627368,627638..628283)
location: region:617667-628283:1
so has part: feature:617667-617672:1:exon
so has part: feature:626835-627214:1:exon
so has part: feature:627324-627368:1:exon
so has part: feature:627638-628283:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:617667-617672:1:exon

position:617672:1
position: 617672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:626835-627214:1:exon

position:626835:1
position: 626835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627214:1
position: 627214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:627324-627368:1:exon

position:627324:1
position: 627324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627368:1
position: 627368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:627638-628283:1:exon

position:627638:1
position: 627638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 4-like
translation: MKGAFNCTGPGPLLPPLPSPLAALALAAALLLSAAAVLGNALVVLAVAYFARLRSPTNALALSLAVADLLVGAVVVPFSATRAVRGCWLHGATFCQLHTCLDVMLSTASIVHLSCIAFDRYVAICDPLSCITFDRYVAICDPLRYTARVTPGAVAAMLVACWLGPLLYVAPIMLGLQSVGAEASLALACPDDCPFVMSATFSLAATSCSFVAPMIIMLAAYARIYRVARRHARSIASRPPAPPGGGDGAKGMAAASSSSSAPRRWRQEYNATKTLGVILGAFFALWLPFFSAAVADGLPGGPRVDGTTWHCVTWLGYVNSAVNPVLYASLNRAFRRAFGILFSPRELAKGRRDAEFTD
SIO_010081: LOC116957575
subclass of: SO_0000673
so part of: LOC116957575
location: join(617667..617672,626835..627214,627324..627368,627638..628283)
location: region:617667-628283:1
so has part: feature:617667-617672:1:exon
so has part: feature:626835-627214:1:exon
so has part: feature:627324-627368:1:exon
so has part: feature:627638-628283:1:exon

XP_032835706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:617667-617672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626835-627214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:627324-627368:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627638-628283:1:exon

ODR4
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: ODR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(637576..648012)
location: region:637576-648012:-1
so has part: feature:637576-648012:-1:exon
subclass of: SO_0000010

116957566
type: Gene
SIO_000068: ncbigene

position:637576:-1
position: 637576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648012:-1
position: 648012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637576-648012:-1:exon

ODR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: ODR4
product: odr-4 GPCR localization factor homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_032979801.1
SIO_010081: ODR4
subclass of: SO_0000673
so part of: ODR4
location: complement(join(637576..637813,638498..638657,643962..645332,647478..648012))
location: region:637576-648012:-1
so has part: feature:647478-648012:-1:exon
so has part: feature:643962-645332:-1:exon
so has part: feature:638498-638657:-1:exon
so has part: feature:637576-637813:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:647478-648012:-1:exon

position:647478:-1
position: 647478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:643962-645332:-1:exon

position:643962:-1
position: 643962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645332:-1
position: 645332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:638498-638657:-1:exon

position:638498:-1
position: 638498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638657:-1
position: 638657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:637576-637813:-1:exon

position:637813:-1
position: 637813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ODR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: ODR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein odr-4 homolog
translation: MAQTARLFVAEEAAERALSSAAATAPAEGRTGLLLGLAGNSSASSASSLSNRDVVLLAVPTPARDDDEEEEEEEEEDGERAGEAWAAEHARLVRRMLPGGIAILGVFLAFPSGGGGGDGDGGDTEKRQAKLRRLLFGMERALARGRPPQGRGGDDDDDDDDDDDGEADGKHRAALLAVGPSGRRWCSSYDVRDAQAPASRAEWRLRPKPPPHQQQQGATPLLVELRCTLHLELRAPLSPPGGRGGGASAAGALRAATRQLAGQLRRAVCLVDGRFLRDDEAIGPADGGGGGGGGRRRLKQQQQRPCPPIAVRILLPPPGAAAGAAAPGAGGPCPHGLLQIVGSASCRALVNPQRRPLLAGPALRALKADAVASLWTRFELLLEEEELVGAGREAAAVATALPRRVFVPVPGLWGARLCHFAFPDETAADCAARVGEVLGMDLGLAGAEEVEEAEEVVAMVVEEEEKAPGPIVTADGADGDGSGGACGPEAMRRRRRKEEEEDGRGGVRGEVGIAGRLCRSPPWLVVGAGVAVVAVVVLLLLYAAVAD
SIO_010081: ODR4
subclass of: SO_0000673
so part of: ODR4
location: complement(join(637695..637813,638498..638657,643962..645326))
location: region:637695-645326:-1
so has part: feature:643962-645326:-1:exon
so has part: feature:638498-638657:-1:exon
so has part: feature:637695-637813:-1:exon

XP_032835692.1
type: Protein
SIO_000068: ncbiprotein

position:637695:-1
position: 637695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645326:-1
position: 645326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643962-645326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638498-638657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:637695-637813:-1:exon

OST4
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: OST4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 648522..652917
location: region:648522-652917:1
so has part: feature:648522-652917:1:exon
subclass of: SO_0000010

116957567
type: Gene
SIO_000068: ncbigene

position:648522:1
position: 648522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652917:1
position: 652917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648522-652917:1:exon

OST4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: OST4
product: oligosaccharyltransferase complex subunit 4, non-catalytic, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_032979802.1
SIO_010081: OST4
subclass of: SO_0000673
so part of: OST4
location: join(648522..648662,651855..652022,652773..652917)
location: region:648522-652917:1
so has part: feature:648522-648662:1:exon
so has part: feature:651855-652022:1:exon
so has part: feature:652773-652917:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:648522-648662:1:exon

position:648662:1
position: 648662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:651855-652022:1:exon

position:651855:1
position: 651855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652022:1
position: 652022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:652773-652917:1:exon

position:652773:1
position: 652773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OST4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: OST4
product: oligosaccharyltransferase complex subunit 4, non-catalytic, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_032979803.1
SIO_010081: OST4
subclass of: SO_0000673
so part of: OST4
location: join(648562..648662,651858..652022,652773..652917)
location: region:648562-652917:1
so has part: feature:648562-648662:1:exon
so has part: feature:651858-652022:1:exon
so has part: feature:652773-652917:1:exon

position:648562:1
position: 648562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648562-648662:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651858-652022:1:exon

position:651858:1
position: 651858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:652773-652917:1:exon

OST4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: OST4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4
translation: MITDVQLAIFANVLGVSLFLLVVLYHYVAVNNPKRSA
SIO_010081: OST4
subclass of: SO_0000673
so part of: OST4
location: 651905..652018
location: region:651905-652018:1
so has part: feature:651905-652018:1:exon

XP_032835693.1
type: Protein
SIO_000068: ncbiprotein

position:651905:1
position: 651905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652018:1
position: 652018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651905-652018:1:exon

OST4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: OST4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4
translation: MITDVQLAIFANVLGVSLFLLVVLYHYVAVNNPKRSA
SIO_010081: OST4
subclass of: SO_0000673
so part of: OST4
location: 651905..652018
location: region:651905-652018:1
so has part: feature:651905-652018:1:exon

XP_032835694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:651905-652018:1:exon

RNF185
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: RNF185
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(716627..745588)
location: region:716627-745588:-1
so has part: feature:716627-745588:-1:exon
subclass of: SO_0000010

116957570
type: Gene
SIO_000068: ncbigene

position:716627:-1
position: 716627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745588:-1
position: 745588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716627-745588:-1:exon

RNF185
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: RNF185
product: ring finger protein 185, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_032979808.1
SIO_010081: RNF185
subclass of: SO_0000673
so part of: RNF185
location: complement(join(716627..716793,733063..733180,736032..736086,738072..738184,740851..740869,745286..745588))
location: region:716627-745588:-1
so has part: feature:745286-745588:-1:exon
so has part: feature:740851-740869:-1:exon
so has part: feature:738072-738184:-1:exon
so has part: feature:736032-736086:-1:exon
so has part: feature:733063-733180:-1:exon
so has part: feature:716627-716793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:745286-745588:-1:exon

position:745286:-1
position: 745286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:740851-740869:-1:exon

position:740851:-1
position: 740851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740869:-1
position: 740869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:738072-738184:-1:exon

position:738072:-1
position: 738072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738184:-1
position: 738184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:736032-736086:-1:exon

position:736032:-1
position: 736032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736086:-1
position: 736086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:733063-733180:-1:exon

position:733063:-1
position: 733063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733180:-1
position: 733180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:716627-716793:-1:exon

position:716793:-1
position: 716793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF185
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: RNF185
product: ring finger protein 185, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_032979807.1
SIO_010081: RNF185
subclass of: SO_0000673
so part of: RNF185
location: complement(join(716663..716793,723600..723697,733063..733180,736032..736086,738072..738184,740851..740869,745286..745588))
location: region:716663-745588:-1
so has part: feature:745286-745588:-1:exon
so has part: feature:740851-740869:-1:exon
so has part: feature:738072-738184:-1:exon
so has part: feature:736032-736086:-1:exon
so has part: feature:733063-733180:-1:exon
so has part: feature:723600-723697:-1:exon
so has part: feature:716663-716793:-1:exon

position:716663:-1
position: 716663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745286-745588:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:740851-740869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:738072-738184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:736032-736086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:733063-733180:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:723600-723697:-1:exon

position:723600:-1
position: 723600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723697:-1
position: 723697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:716663-716793:-1:exon

RNF185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: RNF185
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF185 isoform X2
translation: MSGPAEAAAAGAAAAATDEEVEAARRGGGGGGGGGEEGAEGGGGADPTFECNICLDVARDAVISLCGHLFCWPCLHQWLETRPSRQMCPVCKAGISRDKVIPLYGRGSANQQDPREKTPPRPQGQRPEPEARGGFQGFGFGDGGLQMSFGIGAFPFGFIATAFNINDGRPPPGGAAPLLLSPQNLHEVFFIIVAIVIFLWLLTV
SIO_010081: RNF185
subclass of: SO_0000673
so part of: RNF185
location: complement(join(716696..716793,733063..733180,736032..736086,738072..738184,740851..740869,745286..745497))
location: region:716696-745497:-1
so has part: feature:745286-745497:-1:exon
so has part: feature:740851-740869:-1:exon
so has part: feature:738072-738184:-1:exon
so has part: feature:736032-736086:-1:exon
so has part: feature:733063-733180:-1:exon
so has part: feature:716696-716793:-1:exon

XP_032835699.1
type: Protein
SIO_000068: ncbiprotein

position:716696:-1
position: 716696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745497:-1
position: 745497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745286-745497:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:740851-740869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:738072-738184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:736032-736086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:733063-733180:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:716696-716793:-1:exon

RNF185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: RNF185
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF185 isoform X1
translation: MSGPAEAAAAGAAAAATDEEVEAARRGGGGGGGGGEEGAEGGGGADPTFECNICLDVARDAVISLCGHLFCWPCLHQWLETRPSRQMCPVCKAGISRDKVIPLYGRGSANQQDPREKTPPRPQGQRPEPEARGGFQGFGFGDGGLQMSFGIGAFPFGFIATAFNINDGRPPPAVPGTPQHTEEQFLSRIFLYVALLIMFWLFIA
SIO_010081: RNF185
subclass of: SO_0000673
so part of: RNF185
location: complement(join(723600..723697,733063..733180,736032..736086,738072..738184,740851..740869,745286..745497))
location: region:723600-745497:-1
so has part: feature:745286-745497:-1:exon
so has part: feature:740851-740869:-1:exon
so has part: feature:738072-738184:-1:exon
so has part: feature:736032-736086:-1:exon
so has part: feature:733063-733180:-1:exon
so has part: feature:723600-723697:-1:exon

XP_032835698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:745286-745497:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:740851-740869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:738072-738184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:736032-736086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:733063-733180:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:723600-723697:-1:exon

LOC116957586
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(749753..751414)
location: region:749753-751414:-1
so has part: feature:749753-751414:-1:exon
subclass of: SO_0000011

116957586
type: Gene
SIO_000068: ncbigene

position:749753:-1
position: 749753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751414:-1
position: 751414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749753-751414:-1:exon

LOC116957586
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957586
product: uncharacterized LOC116957586
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XR_004405202.1
SIO_010081: LOC116957586
subclass of: SO_0000673
so part of: LOC116957586
location: complement(join(749753..750187,750411..751414))
location: region:749753-751414:-1
so has part: feature:750411-751414:-1:exon
so has part: feature:749753-750187:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:750411-751414:-1:exon

position:750411:-1
position: 750411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:749753-750187:-1:exon

position:750187:-1
position: 750187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957568
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(751673..826122)
location: region:751673-826122:-1
so has part: feature:751673-826122:-1:exon
subclass of: SO_0000010

116957568
type: Gene
SIO_000068: ncbigene

position:751673:-1
position: 751673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826122:-1
position: 826122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751673-826122:-1:exon

LOC116957568
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957568
product: medium-chain acyl-CoA ligase ACSF2, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032979804.1
SIO_010081: LOC116957568
subclass of: SO_0000673
so part of: LOC116957568
location: complement(join(751673..751946,752236..752304,753568..753681,757570..757711,760666..760817,763048..763155,770250..770326,770930..771021,775184..775332,777971..778066,785569..785737,787559..787677,788233..788286,790854..790982,794782..795019,825746..826122))
location: region:751673-826122:-1
so has part: feature:825746-826122:-1:exon
so has part: feature:794782-795019:-1:exon
so has part: feature:790854-790982:-1:exon
so has part: feature:788233-788286:-1:exon
so has part: feature:787559-787677:-1:exon
so has part: feature:785569-785737:-1:exon
so has part: feature:777971-778066:-1:exon
so has part: feature:775184-775332:-1:exon
so has part: feature:770930-771021:-1:exon
so has part: feature:770250-770326:-1:exon
so has part: feature:763048-763155:-1:exon
so has part: feature:760666-760817:-1:exon
so has part: feature:757570-757711:-1:exon
so has part: feature:753568-753681:-1:exon
so has part: feature:752236-752304:-1:exon
so has part: feature:751673-751946:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:825746-826122:-1:exon

position:825746:-1
position: 825746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:794782-795019:-1:exon

position:794782:-1
position: 794782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795019:-1
position: 795019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:790854-790982:-1:exon

position:790854:-1
position: 790854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790982:-1
position: 790982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:788233-788286:-1:exon

position:788233:-1
position: 788233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788286:-1
position: 788286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:787559-787677:-1:exon

position:787559:-1
position: 787559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787677:-1
position: 787677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:785569-785737:-1:exon

position:785569:-1
position: 785569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785737:-1
position: 785737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:777971-778066:-1:exon

position:777971:-1
position: 777971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778066:-1
position: 778066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:775184-775332:-1:exon

position:775184:-1
position: 775184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775332:-1
position: 775332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:770930-771021:-1:exon

position:770930:-1
position: 770930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771021:-1
position: 771021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:770250-770326:-1:exon

position:770250:-1
position: 770250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770326:-1
position: 770326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:763048-763155:-1:exon

position:763048:-1
position: 763048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763155:-1
position: 763155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:760666-760817:-1:exon

position:760666:-1
position: 760666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760817:-1
position: 760817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:757570-757711:-1:exon

position:757570:-1
position: 757570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757711:-1
position: 757711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:753568-753681:-1:exon

position:753568:-1
position: 753568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753681:-1
position: 753681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:752236-752304:-1:exon

position:752236:-1
position: 752236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752304:-1
position: 752304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:751673-751946:-1:exon

position:751946:-1
position: 751946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957568
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: medium-chain acyl-CoA ligase ACSF2, mitochondrial-like
translation: MLPLLRPPLLRLPYRGLPRAAARSTLHRALHASRGLCSTGPVQGPKNEEGAEDAGLGGAGGATPARLSWSYVHGASQCPLLGSTLGASLELAARAQPQRALLICAERRAEFTYSHLLERADRMAAGLLALGVTRGDRLGIWGPNSAEWALTALAAARAGIVLVNINPAYQPQELEFALKKVGCKGIVSAVEFKGRNYLDLLTQLCPELPSSCPGDLHSARLPDLRVVISLVEGEPNPGALSLREVEGRATPGLEAERHAIHSALSCDDPINIQYTSGTTGQPKGATLTHHNILNNAHLLGERMGYHWRDVRVALPVPLYHCFGLVAGLLSCVAHSGTLVLPSAAYSARATLTAIQTHRCTVLYGTPTMFVDMLNDPDFHSFDLSSLQTGVVAGSPCPPELFRRVVDSMKLPDFVNAYGTTENSPVTFCGFPRDGLTTKIDTVGRVLQHLEAKVVGPGSSPPLRVGEQGELCVRGHCVMRGYWGDSVKTRECITPDGWYHTGDVAVMDELGYCRIVGRLKDLIIRGGENVYPAEVEALLHTHPSVLEAQVVGVFDERMGEEACACLRLQPGVAALSARDLHSFCNTKIAHFKIPKYVEIVDSYPLTVTGKIQKFKLREQMEKKLGLK
SIO_010081: LOC116957568
subclass of: SO_0000673
so part of: LOC116957568
location: complement(join(751893..751946,752236..752304,753568..753681,757570..757711,760666..760817,763048..763155,770250..770326,770930..771021,775184..775332,777971..778066,785569..785737,787559..787677,788233..788286,790854..790982,794782..795019,825746..825864))
location: region:751893-825864:-1
so has part: feature:825746-825864:-1:exon
so has part: feature:794782-795019:-1:exon
so has part: feature:790854-790982:-1:exon
so has part: feature:788233-788286:-1:exon
so has part: feature:787559-787677:-1:exon
so has part: feature:785569-785737:-1:exon
so has part: feature:777971-778066:-1:exon
so has part: feature:775184-775332:-1:exon
so has part: feature:770930-771021:-1:exon
so has part: feature:770250-770326:-1:exon
so has part: feature:763048-763155:-1:exon
so has part: feature:760666-760817:-1:exon
so has part: feature:757570-757711:-1:exon
so has part: feature:753568-753681:-1:exon
so has part: feature:752236-752304:-1:exon
so has part: feature:751893-751946:-1:exon

XP_032835695.1
type: Protein
SIO_000068: ncbiprotein

position:751893:-1
position: 751893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825864:-1
position: 825864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825746-825864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:794782-795019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:790854-790982:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:788233-788286:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:787559-787677:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:785569-785737:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:777971-778066:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:775184-775332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:770930-771021:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:770250-770326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:763048-763155:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:760666-760817:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:757570-757711:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:753568-753681:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:752236-752304:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:751893-751946:-1:exon

LOC116957576
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(871345..929388)
location: region:871345-929388:-1
so has part: feature:871345-929388:-1:exon
subclass of: SO_0000010

116957576
type: Gene
SIO_000068: ncbigene

position:871345:-1
position: 871345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929388:-1
position: 929388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871345-929388:-1:exon

LOC116957576
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957576
product: guanylate-binding protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032979817.1
SIO_010081: LOC116957576
subclass of: SO_0000673
so part of: LOC116957576
location: complement(join(871345..871810,875002..875105,875548..875650,878384..878590,880056..880336,891041..891218,896337..896601,899661..899770,909957..910141,917715..917806,920075..920129,928937..929388))
location: region:871345-929388:-1
so has part: feature:928937-929388:-1:exon
so has part: feature:920075-920129:-1:exon
so has part: feature:917715-917806:-1:exon
so has part: feature:909957-910141:-1:exon
so has part: feature:899661-899770:-1:exon
so has part: feature:896337-896601:-1:exon
so has part: feature:891041-891218:-1:exon
so has part: feature:880056-880336:-1:exon
so has part: feature:878384-878590:-1:exon
so has part: feature:875548-875650:-1:exon
so has part: feature:875002-875105:-1:exon
so has part: feature:871345-871810:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:928937-929388:-1:exon

position:928937:-1
position: 928937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:920075-920129:-1:exon

position:920075:-1
position: 920075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:920129:-1
position: 920129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:917715-917806:-1:exon

position:917715:-1
position: 917715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917806:-1
position: 917806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:909957-910141:-1:exon

position:909957:-1
position: 909957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910141:-1
position: 910141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:899661-899770:-1:exon

position:899661:-1
position: 899661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899770:-1
position: 899770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:896337-896601:-1:exon

position:896337:-1
position: 896337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896601:-1
position: 896601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:891041-891218:-1:exon

position:891041:-1
position: 891041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891218:-1
position: 891218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:880056-880336:-1:exon

position:880056:-1
position: 880056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880336:-1
position: 880336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:878384-878590:-1:exon

position:878384:-1
position: 878384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878590:-1
position: 878590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:875548-875650:-1:exon

position:875548:-1
position: 875548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875650:-1
position: 875650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:875002-875105:-1:exon

position:875002:-1
position: 875002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875105:-1
position: 875105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:871345-871810:-1:exon

position:871810:-1
position: 871810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957576
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylate-binding protein 1-like
translation: MATSSPYPSMPLPFIMTDDTGRFYINEDTAQVLGRIKKPVVVVAIAGKYRTGKSFLMNRLTKAVKPVLKPDMDPKFAMKRTVGFIRGVNLDRRRVVQRPEPEKHVHPLLVVGYTVRYPQDDSFICLASSGFSLGKTVQSHTKGIWVWPVRHPRDERKCLLLLDTEGLGDVEKANGEHDIWLFVMAVLLSNILVYNTVGTLDHSGLEQLQYVKDVAQYVKATVETHKDNPKDLNKYFPSLIVCVRDFTLTLELNGYPCTADDYMEHCFRIRKPETQRGQEEANKTFNKQRDIMCHYFKKRKCFTFPMPVNPEDLSKLETIPDKDLKPGFIKVANEFTSHIHQEVKYKNIDGVILTGQLFLQVAEMYIAAQRSGDMVCIENTRVQVVQLANLQVVEDAKELYRKEVENILVDFPLKTCQLYKDHEKCMEKAMDLFYCHAVLDWEHTHEKELMKHMENMCKRLVTHNKQQSQEKCRIRLKELYWLVDEQYQDFMQPGGFMKYQAMMKKIEEDYFETTGLGDEMTSMYKEFLEQNKESGKAILMVDKTLTSVQQQEIEYKQNETRMKLELKAMKEAQEYQDEKISYLQNQYQNVLKIFSKNIQVIKTHTDENIEDIEQNHKKKMASNNKCIIS
SIO_010081: LOC116957576
subclass of: SO_0000673
so part of: LOC116957576
location: complement(join(871685..871810,875002..875105,875548..875650,878384..878590,880056..880336,891041..891218,896337..896601,899661..899770,909957..910141,917715..917806,920075..920129,928937..929120))
location: region:871685-929120:-1
so has part: feature:928937-929120:-1:exon
so has part: feature:920075-920129:-1:exon
so has part: feature:917715-917806:-1:exon
so has part: feature:909957-910141:-1:exon
so has part: feature:899661-899770:-1:exon
so has part: feature:896337-896601:-1:exon
so has part: feature:891041-891218:-1:exon
so has part: feature:880056-880336:-1:exon
so has part: feature:878384-878590:-1:exon
so has part: feature:875548-875650:-1:exon
so has part: feature:875002-875105:-1:exon
so has part: feature:871685-871810:-1:exon

XP_032835708.1
type: Protein
SIO_000068: ncbiprotein

position:871685:-1
position: 871685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929120:-1
position: 929120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928937-929120:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:920075-920129:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:917715-917806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:909957-910141:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:899661-899770:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:896337-896601:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:891041-891218:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:880056-880336:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:878384-878590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:875548-875650:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:875002-875105:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:871685-871810:-1:exon

LOC116957563
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957563
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 978669..1074686
location: region:978669-1074686:1
so has part: feature:978669-1074686:1:exon
subclass of: SO_0000010

116957563
type: Gene
SIO_000068: ncbigene

position:978669:1
position: 978669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074686:1
position: 1074686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978669-1074686:1:exon

LOC116957563
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957563
product: guanylate-binding protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032979799.1
SIO_010081: LOC116957563
subclass of: SO_0000673
so part of: LOC116957563
location: join(978669..979245,991201..991258,1006593..1006633,1007751..1007805,1008629..1008696,1009910..1009936,1011662..1011789,1017863..1017972,1041253..1041517,1045304..1045481,1055582..1055862,1059382..1059588,1061804..1061906,1064761..1064864,1074357..1074686)
location: region:978669-1074686:1
so has part: feature:978669-979245:1:exon
so has part: feature:991201-991258:1:exon
so has part: feature:1006593-1006633:1:exon
so has part: feature:1007751-1007805:1:exon
so has part: feature:1008629-1008696:1:exon
so has part: feature:1009910-1009936:1:exon
so has part: feature:1011662-1011789:1:exon
so has part: feature:1017863-1017972:1:exon
so has part: feature:1041253-1041517:1:exon
so has part: feature:1045304-1045481:1:exon
so has part: feature:1055582-1055862:1:exon
so has part: feature:1059382-1059588:1:exon
so has part: feature:1061804-1061906:1:exon
so has part: feature:1064761-1064864:1:exon
so has part: feature:1074357-1074686:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:978669-979245:1:exon

position:979245:1
position: 979245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:991201-991258:1:exon

position:991201:1
position: 991201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991258:1
position: 991258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1006593-1006633:1:exon

position:1006593:1
position: 1006593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006633:1
position: 1006633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1007751-1007805:1:exon

position:1007751:1
position: 1007751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007805:1
position: 1007805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1008629-1008696:1:exon

position:1008629:1
position: 1008629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008696:1
position: 1008696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1009910-1009936:1:exon

position:1009910:1
position: 1009910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1009936:1
position: 1009936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1011662-1011789:1:exon

position:1011662:1
position: 1011662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011789:1
position: 1011789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1017863-1017972:1:exon

position:1017863:1
position: 1017863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1017972:1
position: 1017972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1041253-1041517:1:exon

position:1041253:1
position: 1041253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041517:1
position: 1041517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1045304-1045481:1:exon

position:1045304:1
position: 1045304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045481:1
position: 1045481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1055582-1055862:1:exon

position:1055582:1
position: 1055582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055862:1
position: 1055862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1059382-1059588:1:exon

position:1059382:1
position: 1059382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059588:1
position: 1059588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1061804-1061906:1:exon

position:1061804:1
position: 1061804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061906:1
position: 1061906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1064761-1064864:1:exon

position:1064761:1
position: 1064761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064864:1
position: 1064864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1074357-1074686:1:exon

position:1074357:1
position: 1074357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957563
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957563
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylate-binding protein 1-like
translation: MATSSPYPQMPLQFIMTDDYGRFYINKDTAKVLGRITKPLVVVAIAGKYRTGKSFLMNRLAAEEVNPALNRYKMHGFVTKRSEGGSSRHHIEEPDKEEFANVRSMVKNWNLTGYGRFEQNKPKAGPALHTLLQTREIGVSSTISGFSLGNTVQSHTKGIWVWPVCHPRDEKKCLLLLDTEGLGDVEKANGEYDIWLFVMAVLLSNILVYNTVGTLDHSGLEQLQYVKDMAQYVKARVGSHEDNSNNLDKYFPSLIICVRDFSLKLELNGSPCTADNYMEHCFKIRKSETQRGREEANKSFNKERELMCHYFKKRKCFMFPMPVNPEDLSKLETIPDRDLKPGFLEVANEFTSHIYQEVKYKNIDGVILTGQLFLQVAELYVAAQRSGDMVCIENTRVQVVQLANLQAVEDAKALYQRQMESKEVYLPLKLWQLHQHHERCMEQALDLFYSHAVLDRDHKHEKELMEHMETTYLKLVKQNKQRSQEKCRIRLTELYGLVDERYQDFMQPGGFMKYEAMMKKIEVDYHDTTGLGDEMATMYKEFLEQKKDSGKAIQMVDNTLTRVQQQEIENKQKEKIMALQMKTMKEEQDNQKMEILFLKNQCKKLQNTFGKYAQVIKTNTDENIQEIQQNHDEMMQSESKKKCTIS
SIO_010081: LOC116957563
subclass of: SO_0000673
so part of: LOC116957563
location: join(979062..979245,991201..991258,1006593..1006633,1007751..1007805,1008629..1008696,1009910..1009936,1011662..1011789,1017863..1017972,1041253..1041517,1045304..1045481,1055582..1055862,1059382..1059588,1061804..1061906,1064761..1064864,1074357..1074488)
location: region:979062-1074488:1
so has part: feature:979062-979245:1:exon
so has part: feature:991201-991258:1:exon
so has part: feature:1006593-1006633:1:exon
so has part: feature:1007751-1007805:1:exon
so has part: feature:1008629-1008696:1:exon
so has part: feature:1009910-1009936:1:exon
so has part: feature:1011662-1011789:1:exon
so has part: feature:1017863-1017972:1:exon
so has part: feature:1041253-1041517:1:exon
so has part: feature:1045304-1045481:1:exon
so has part: feature:1055582-1055862:1:exon
so has part: feature:1059382-1059588:1:exon
so has part: feature:1061804-1061906:1:exon
so has part: feature:1064761-1064864:1:exon
so has part: feature:1074357-1074488:1:exon

XP_032835690.1
type: Protein
SIO_000068: ncbiprotein

position:979062:1
position: 979062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074488:1
position: 1074488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979062-979245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991201-991258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1006593-1006633:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007751-1007805:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1008629-1008696:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1009910-1009936:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1011662-1011789:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1017863-1017972:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041253-1041517:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1045304-1045481:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1055582-1055862:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1059382-1059588:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1061804-1061906:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1064761-1064864:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1074357-1074488:1:exon

LOC116957569
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1099574..1141359)
location: region:1099574-1141359:-1
so has part: feature:1099574-1141359:-1:exon
subclass of: SO_0000010

116957569
type: Gene
SIO_000068: ncbigene

position:1099574:-1
position: 1099574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141359:-1
position: 1141359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1099574-1141359:-1:exon

LOC116957569
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957569
product: guanylate-binding protein 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032979806.1
SIO_010081: LOC116957569
subclass of: SO_0000673
so part of: LOC116957569
location: complement(join(1099574..1103167,1107077..1107180,1109382..1109484,1111181..1111387,1113786..1114066,1122582..1122747,1127019..1127268,1132360..1132469,1137002..1137129,1141102..1141359))
location: region:1099574-1141359:-1
so has part: feature:1141102-1141359:-1:exon
so has part: feature:1137002-1137129:-1:exon
so has part: feature:1132360-1132469:-1:exon
so has part: feature:1127019-1127268:-1:exon
so has part: feature:1122582-1122747:-1:exon
so has part: feature:1113786-1114066:-1:exon
so has part: feature:1111181-1111387:-1:exon
so has part: feature:1109382-1109484:-1:exon
so has part: feature:1107077-1107180:-1:exon
so has part: feature:1099574-1103167:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1141102-1141359:-1:exon

position:1141102:-1
position: 1141102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1137002-1137129:-1:exon

position:1137002:-1
position: 1137002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137129:-1
position: 1137129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1132360-1132469:-1:exon

position:1132360:-1
position: 1132360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132469:-1
position: 1132469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1127019-1127268:-1:exon

position:1127019:-1
position: 1127019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1127268:-1
position: 1127268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1122582-1122747:-1:exon

position:1122582:-1
position: 1122582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1122747:-1
position: 1122747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1113786-1114066:-1:exon

position:1113786:-1
position: 1113786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114066:-1
position: 1114066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1111181-1111387:-1:exon

position:1111181:-1
position: 1111181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1111387:-1
position: 1111387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1109382-1109484:-1:exon

position:1109382:-1
position: 1109382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109484:-1
position: 1109484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1107077-1107180:-1:exon

position:1107077:-1
position: 1107077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1107180:-1
position: 1107180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1099574-1103167:-1:exon

position:1103167:-1
position: 1103167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957569
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylate-binding protein 4-like
translation: MSRRVIFLPRFRSDKAHRSDLQGPTSKGFTVGHTMQSQTKGIWAWPVPHPVDKEICLLLLDMEGLGDSEKANEQHDIWLFIMAMLLCNVLVYNTEKTLDNKSLEQLRYVKNMSEHVRSQIFSRGDKPSILESHLPSLVVCVRDCALKLEWDEKPCTPDEYMEKCFQVRRSNSLKDEEFNRERDLMCAYFKKRKCFMFPMPAHPEDMDQLENKLSKKFLKVTEEFTSHIYQIIKYKNIDGVILTGQLFLQVAELYVQAQRSGNMACIEGARKQVVLFANMQAMDDAKGVYQREMETLLNKLPVEYNELQRHQEECSKKAMALFYRRSVLDRNHEHEKELLNFTMKEFERMKETNTERSYTVSKQRLRVLYKPLKNMNADFMQLGGYQKYEVAMQKLDEEYRATEGLGDEKDKAYKDFMEKNKDRANQIRVVDKALTQAQQEEIKRRTLERINEQQMEALKMENKAKEADISLLNSQQQFIIRMFNDNLINIQKHTDENIKEIQKTHQKEMDSVKNKSKCVIC
SIO_010081: LOC116957569
subclass of: SO_0000673
so part of: LOC116957569
location: complement(join(1103033..1103167,1107077..1107180,1109382..1109484,1111181..1111387,1113786..1114066,1122582..1122747,1127019..1127268,1132360..1132469,1137002..1137129,1141102..1141183))
location: region:1103033-1141183:-1
so has part: feature:1141102-1141183:-1:exon
so has part: feature:1137002-1137129:-1:exon
so has part: feature:1132360-1132469:-1:exon
so has part: feature:1127019-1127268:-1:exon
so has part: feature:1122582-1122747:-1:exon
so has part: feature:1113786-1114066:-1:exon
so has part: feature:1111181-1111387:-1:exon
so has part: feature:1109382-1109484:-1:exon
so has part: feature:1107077-1107180:-1:exon
so has part: feature:1103033-1103167:-1:exon

XP_032835697.1
type: Protein
SIO_000068: ncbiprotein

position:1103033:-1
position: 1103033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141183:-1
position: 1141183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1141102-1141183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137002-1137129:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132360-1132469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1127019-1127268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1122582-1122747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1113786-1114066:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1111181-1111387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1109382-1109484:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1107077-1107180:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1103033-1103167:-1:exon

LOC116957581
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1219666..1250471
location: region:1219666-1250471:1
so has part: feature:1219666-1250471:1:exon
subclass of: SO_0000010

116957581
type: Gene
SIO_000068: ncbigene

position:1219666:1
position: 1219666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250471:1
position: 1250471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1219666-1250471:1:exon

LOC116957581
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957581
product: guanylate-binding protein 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032979821.1
SIO_010081: LOC116957581
subclass of: SO_0000673
so part of: LOC116957581
location: join(1219666..1220382,1222154..1222263,1230024..1230273,1238615..1238780,1239513..1239793,1244631..1244837,1245652..1245754,1246765..1246868,1249568..1250471)
location: region:1219666-1250471:1
so has part: feature:1219666-1220382:1:exon
so has part: feature:1222154-1222263:1:exon
so has part: feature:1230024-1230273:1:exon
so has part: feature:1238615-1238780:1:exon
so has part: feature:1239513-1239793:1:exon
so has part: feature:1244631-1244837:1:exon
so has part: feature:1245652-1245754:1:exon
so has part: feature:1246765-1246868:1:exon
so has part: feature:1249568-1250471:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1219666-1220382:1:exon

position:1220382:1
position: 1220382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1222154-1222263:1:exon

position:1222154:1
position: 1222154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222263:1
position: 1222263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1230024-1230273:1:exon

position:1230024:1
position: 1230024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1230273:1
position: 1230273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1238615-1238780:1:exon

position:1238615:1
position: 1238615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238780:1
position: 1238780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1239513-1239793:1:exon

position:1239513:1
position: 1239513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239793:1
position: 1239793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1244631-1244837:1:exon

position:1244631:1
position: 1244631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244837:1
position: 1244837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1245652-1245754:1:exon

position:1245652:1
position: 1245652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245754:1
position: 1245754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1246765-1246868:1:exon

position:1246765:1
position: 1246765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246868:1
position: 1246868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1249568-1250471:1:exon

position:1249568:1
position: 1249568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957581
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylate-binding protein 4-like
translation: MWLQSKNTLETCPHVYVLFPSTRWEPGGFAVGHAVQSKTKGIWAWPIPHPANKENCLLLLDTEGLGDPEKANEEHDIWLFIMAVLLCNVLVYNTEKTLDNTSLEQLRYVKNMSEHVRSQISPEDEKSSVMESHLPSLVVCVRDCALKLEWDGKSFTPDEYMEKCFQVRRSNSPKNEEFNRERDLMCSYFKKRKCFIFPMPTHPDDMDQLENKLSETFLKVAEEFTSHIYQIMKYKNIDGVILTGQLFLQVAELYVQAHRLGDMACIEGARKEVVLLANKQAMEDAKGVYQREMETLLNKLPVEYKQLQRHQEECTKKAMALFCRRSVLDCNHEFEKMLLRFTLETFEKMEKKNTEQSYKLSEQRLRELFQHVNEMDKEFMQPGGYQRYKAAMLKLDEEYRATEGLGEEKDKAYEDFMEKNKDRGQSILMVDKTLTQVQQEELKSRTLERKRKQDSEALKNVDKDRESNISHLENQQKVMTELFDEKLKAIENHTDENIANINSNFVKKMMEFFQQK
SIO_010081: LOC116957581
subclass of: SO_0000673
so part of: LOC116957581
location: join(1220173..1220382,1222154..1222263,1230024..1230273,1238615..1238780,1239513..1239793,1244631..1244837,1245652..1245754,1246765..1246868,1249568..1249687)
location: region:1220173-1249687:1
so has part: feature:1220173-1220382:1:exon
so has part: feature:1222154-1222263:1:exon
so has part: feature:1230024-1230273:1:exon
so has part: feature:1238615-1238780:1:exon
so has part: feature:1239513-1239793:1:exon
so has part: feature:1244631-1244837:1:exon
so has part: feature:1245652-1245754:1:exon
so has part: feature:1246765-1246868:1:exon
so has part: feature:1249568-1249687:1:exon

XP_032835712.1
type: Protein
SIO_000068: ncbiprotein

position:1220173:1
position: 1220173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249687:1
position: 1249687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1220173-1220382:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222154-1222263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1230024-1230273:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1238615-1238780:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1239513-1239793:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1244631-1244837:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1245652-1245754:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1246765-1246868:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1249568-1249687:1:exon

LOC116957587
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1369298..1387808
location: region:1369298-1387808:1
so has part: feature:1369298-1387808:1:exon
subclass of: SO_0000010

116957587
type: Gene
SIO_000068: ncbigene

position:1369298:1
position: 1369298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387808:1
position: 1387808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1369298-1387808:1:exon

LOC116957587
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957587
product: lysozyme g-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032979826.1
SIO_010081: LOC116957587
subclass of: SO_0000673
so part of: LOC116957587
location: join(1369298..1369551,1371592..1371638,1373227..1373367,1373820..1373975,1374630..1374725,1378098..1378154,1379804..1380000,1384970..1385108,1387309..1387808)
location: region:1369298-1387808:1
so has part: feature:1369298-1369551:1:exon
so has part: feature:1371592-1371638:1:exon
so has part: feature:1373227-1373367:1:exon
so has part: feature:1373820-1373975:1:exon
so has part: feature:1374630-1374725:1:exon
so has part: feature:1378098-1378154:1:exon
so has part: feature:1379804-1380000:1:exon
so has part: feature:1384970-1385108:1:exon
so has part: feature:1387309-1387808:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1369298-1369551:1:exon

position:1369551:1
position: 1369551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1371592-1371638:1:exon

position:1371592:1
position: 1371592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1371638:1
position: 1371638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1373227-1373367:1:exon

position:1373227:1
position: 1373227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373367:1
position: 1373367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1373820-1373975:1:exon

position:1373820:1
position: 1373820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373975:1
position: 1373975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1374630-1374725:1:exon

position:1374630:1
position: 1374630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1374725:1
position: 1374725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1378098-1378154:1:exon

position:1378098:1
position: 1378098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378154:1
position: 1378154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1379804-1380000:1:exon

position:1379804:1
position: 1379804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1380000:1
position: 1380000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1384970-1385108:1:exon

position:1384970:1
position: 1384970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385108:1
position: 1385108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1387309-1387808:1:exon

position:1387309:1
position: 1387309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957587
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957587
product: lysozyme g-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032979827.1
SIO_010081: LOC116957587
subclass of: SO_0000673
so part of: LOC116957587
location: join(1369305..1369551,1371592..1371638,1373227..1373367,1373820..1373975,1374630..1374725,1379804..1380000,1384970..1385108,1387309..1387808)
location: region:1369305-1387808:1
so has part: feature:1369305-1369551:1:exon
so has part: feature:1371592-1371638:1:exon
so has part: feature:1373227-1373367:1:exon
so has part: feature:1373820-1373975:1:exon
so has part: feature:1374630-1374725:1:exon
so has part: feature:1379804-1380000:1:exon
so has part: feature:1384970-1385108:1:exon
so has part: feature:1387309-1387808:1:exon

position:1369305:1
position: 1369305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1369305-1369551:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1371592-1371638:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1373227-1373367:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1373820-1373975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1374630-1374725:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1379804-1380000:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1384970-1385108:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1387309-1387808:1:exon

LOC116957587
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysozyme g-like isoform X1
translation: MLGAFAILLFVSSAAAADTACTGQGGECLDWRYTVCLAGVATNLCSGDSNRRCCLQCNSACLSNEQSWSANDGQCTDMGGKCQVNSNYCGGSYSSGLCGGPSNRQCCIESQSGGSGTGCYGDLMNIDTTGASIKTAKQDKLSEREFDTREELLSLEAMHGTTRGVAASKKLVNADLMRLKNYKTIIVATANAKCMDPAVIAAIISRESRAGALLVKGFGDNGNGFGLMQVDKRFHNIVGTWDSEDHLKQGTGILIDMISAIKKKFPNWTQDQQMKGGISAYNAGTRNVGSYANMDIGTTGDDYANDVVARAQMLRDNGHF
SIO_010081: LOC116957587
subclass of: SO_0000673
so part of: LOC116957587
location: join(1371599..1371638,1373227..1373367,1373820..1373975,1374630..1374725,1378098..1378154,1379804..1380000,1384970..1385108,1387309..1387445)
location: region:1371599-1387445:1
so has part: feature:1371599-1371638:1:exon
so has part: feature:1373227-1373367:1:exon
so has part: feature:1373820-1373975:1:exon
so has part: feature:1374630-1374725:1:exon
so has part: feature:1378098-1378154:1:exon
so has part: feature:1379804-1380000:1:exon
so has part: feature:1384970-1385108:1:exon
so has part: feature:1387309-1387445:1:exon

XP_032835717.1
type: Protein
SIO_000068: ncbiprotein

position:1371599:1
position: 1371599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387445:1
position: 1387445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1371599-1371638:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1373227-1373367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1373820-1373975:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1374630-1374725:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1378098-1378154:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1379804-1380000:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1384970-1385108:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1387309-1387445:1:exon

LOC116957587
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysozyme g-like isoform X2
translation: MLGAFAILLFVSSAAAADTACTGQGGECLDWRYTVCLAGVATNLCSGDSNRRCCLQCNSACLSNEQSWSANDGQCTDMGGKCQVNSNYCGGSYSSGLCGGPSNRQCCIESQSGGSGTGCYGDLMNIDTTGASIKTAKQDKLSERGVAASKKLVNADLMRLKNYKTIIVATANAKCMDPAVIAAIISRESRAGALLVKGFGDNGNGFGLMQVDKRFHNIVGTWDSEDHLKQGTGILIDMISAIKKKFPNWTQDQQMKGGISAYNAGTRNVGSYANMDIGTTGDDYANDVVARAQMLRDNGHF
SIO_010081: LOC116957587
subclass of: SO_0000673
so part of: LOC116957587
location: join(1371599..1371638,1373227..1373367,1373820..1373975,1374630..1374725,1379804..1380000,1384970..1385108,1387309..1387445)
location: region:1371599-1387445:1
so has part: feature:1371599-1371638:1:exon
so has part: feature:1373227-1373367:1:exon
so has part: feature:1373820-1373975:1:exon
so has part: feature:1374630-1374725:1:exon
so has part: feature:1379804-1380000:1:exon
so has part: feature:1384970-1385108:1:exon
so has part: feature:1387309-1387445:1:exon

XP_032835718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1371599-1371638:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1373227-1373367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1373820-1373975:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1374630-1374725:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1379804-1380000:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1384970-1385108:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1387309-1387445:1:exon

LOC116957571
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1433096..1469708
location: region:1433096-1469708:1
so has part: feature:1433096-1469708:1:exon
subclass of: SO_0000010

116957571
type: Gene
SIO_000068: ncbigene

position:1433096:1
position: 1433096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469708:1
position: 1469708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1433096-1469708:1:exon

LOC116957571
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957571
product: septin-2B-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_032979809.1
SIO_010081: LOC116957571
subclass of: SO_0000673
so part of: LOC116957571
location: join(1433096..1433210,1435681..1435804,1438649..1438783,1442820..1442937,1454399..1454500,1456230..1456375,1459810..1459893,1465596..1465662,1469512..1469707)
location: region:1433096-1469707:1
so has part: feature:1433096-1433210:1:exon
so has part: feature:1435681-1435804:1:exon
so has part: feature:1438649-1438783:1:exon
so has part: feature:1442820-1442937:1:exon
so has part: feature:1454399-1454500:1:exon
so has part: feature:1456230-1456375:1:exon
so has part: feature:1459810-1459893:1:exon
so has part: feature:1465596-1465662:1:exon
so has part: feature:1469512-1469707:1:exon

position:1469707:1
position: 1469707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1433096-1433210:1:exon

position:1433210:1
position: 1433210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1435681-1435804:1:exon

position:1435681:1
position: 1435681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1435804:1
position: 1435804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1438649-1438783:1:exon

position:1438649:1
position: 1438649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1438783:1
position: 1438783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1442820-1442937:1:exon

position:1442820:1
position: 1442820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1442937:1
position: 1442937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1454399-1454500:1:exon

position:1454399:1
position: 1454399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1454500:1
position: 1454500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1456230-1456375:1:exon

position:1456230:1
position: 1456230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456375:1
position: 1456375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1459810-1459893:1:exon

position:1459810:1
position: 1459810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1459893:1
position: 1459893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1465596-1465662:1:exon

position:1465596:1
position: 1465596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1465662:1
position: 1465662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1469512-1469707:1:exon

position:1469512:1
position: 1469512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957571
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-2B-like isoform X1
translation: MVVVVVVGESGLGKSTLINSLFLTDLYPERTIPSAAEKISRTVEIEASTVEIEERGVKLRLTVVDTPGFGDPINSADCFRPILQYIDSQYERYLHDESGLNRRHILDYRVHCCFYFISPFGHGLKPLDVEFMRALSSKVNIVPVIAKADSLTASERLRMKTRVLEELEENGIRIYQLPDAESDEDEDFKEQTRILKASVPFSVVGSNQLIEVRGRRVRGRLYPWGVVEVEHPEHNDFLKLRTMLITHMQDLQEVTQDLHYENFRSTRLKHASRGGGQEVGDDEERDKILREKEAELKRMQEMITKMQIQMQMQGHQGE
SIO_010081: LOC116957571
subclass of: SO_0000673
so part of: LOC116957571
location: join(1433102..1433210,1435681..1435804,1438649..1438783,1442820..1442937,1454399..1454500,1456230..1456375,1459810..1459893,1465596..1465662,1469512..1469583)
location: region:1433102-1469583:1
so has part: feature:1433102-1433210:1:exon
so has part: feature:1435681-1435804:1:exon
so has part: feature:1438649-1438783:1:exon
so has part: feature:1442820-1442937:1:exon
so has part: feature:1454399-1454500:1:exon
so has part: feature:1456230-1456375:1:exon
so has part: feature:1459810-1459893:1:exon
so has part: feature:1465596-1465662:1:exon
so has part: feature:1469512-1469583:1:exon

XP_032835700.1
type: Protein
SIO_000068: ncbiprotein

position:1433102:1
position: 1433102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469583:1
position: 1469583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1433102-1433210:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1435681-1435804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438649-1438783:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1442820-1442937:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1454399-1454500:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1456230-1456375:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1459810-1459893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1465596-1465662:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1469512-1469583:1:exon

LOC116957571
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957571
product: septin-2B-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032979811.1
SIO_010081: LOC116957571
subclass of: SO_0000673
so part of: LOC116957571
location: join(1439260..1439405,1442820..1442937,1454399..1454500,1456230..1456375,1459810..1459893,1465596..1465662,1469512..1469708)
location: region:1439260-1469708:1
so has part: feature:1439260-1439405:1:exon
so has part: feature:1442820-1442937:1:exon
so has part: feature:1454399-1454500:1:exon
so has part: feature:1456230-1456375:1:exon
so has part: feature:1459810-1459893:1:exon
so has part: feature:1465596-1465662:1:exon
so has part: feature:1469512-1469708:1:exon

position:1439260:1
position: 1439260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1439260-1439405:1:exon

position:1439405:1
position: 1439405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1442820-1442937:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1454399-1454500:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1456230-1456375:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1459810-1459893:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1465596-1465662:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1469512-1469708:1:exon

LOC116957571
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957571
product: septin-2B-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_032979810.1
SIO_010081: LOC116957571
subclass of: SO_0000673
so part of: LOC116957571
location: join(1440326..1440480,1442820..1442937,1454399..1454500,1456230..1456375,1459810..1459893,1465596..1465662,1469512..1469707)
location: region:1440326-1469707:1
so has part: feature:1440326-1440480:1:exon
so has part: feature:1442820-1442937:1:exon
so has part: feature:1454399-1454500:1:exon
so has part: feature:1456230-1456375:1:exon
so has part: feature:1459810-1459893:1:exon
so has part: feature:1465596-1465662:1:exon
so has part: feature:1469512-1469707:1:exon

position:1440326:1
position: 1440326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1440326-1440480:1:exon

position:1440480:1
position: 1440480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1442820-1442937:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1454399-1454500:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1456230-1456375:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1459810-1459893:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1465596-1465662:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1469512-1469707:1:exon

LOC116957571
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-2-like isoform X2
translation: MRALSSKVNIVPVIAKADSLTASERLRMKTRVLEELEENGIRIYQLPDAESDEDEDFKEQTRILKASVPFSVVGSNQLIEVRGRRVRGRLYPWGVVEVEHPEHNDFLKLRTMLITHMQDLQEVTQDLHYENFRSTRLKHASRGGGQEVGDDEERDKILREKEAELKRMQEMITKMQIQMQMQGHQGE
SIO_010081: LOC116957571
subclass of: SO_0000673
so part of: LOC116957571
location: join(1442845..1442937,1454399..1454500,1456230..1456375,1459810..1459893,1465596..1465662,1469512..1469583)
location: region:1442845-1469583:1
so has part: feature:1442845-1442937:1:exon
so has part: feature:1454399-1454500:1:exon
so has part: feature:1456230-1456375:1:exon
so has part: feature:1459810-1459893:1:exon
so has part: feature:1465596-1465662:1:exon
so has part: feature:1469512-1469583:1:exon

XP_032835701.1
type: Protein
SIO_000068: ncbiprotein

position:1442845:1
position: 1442845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1442845-1442937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1454399-1454500:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1456230-1456375:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1459810-1459893:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1465596-1465662:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1469512-1469583:1:exon

LOC116957571
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-2-like isoform X2
translation: MRALSSKVNIVPVIAKADSLTASERLRMKTRVLEELEENGIRIYQLPDAESDEDEDFKEQTRILKASVPFSVVGSNQLIEVRGRRVRGRLYPWGVVEVEHPEHNDFLKLRTMLITHMQDLQEVTQDLHYENFRSTRLKHASRGGGQEVGDDEERDKILREKEAELKRMQEMITKMQIQMQMQGHQGE
SIO_010081: LOC116957571
subclass of: SO_0000673
so part of: LOC116957571
location: join(1442845..1442937,1454399..1454500,1456230..1456375,1459810..1459893,1465596..1465662,1469512..1469583)
location: region:1442845-1469583:1
so has part: feature:1442845-1442937:1:exon
so has part: feature:1454399-1454500:1:exon
so has part: feature:1456230-1456375:1:exon
so has part: feature:1459810-1459893:1:exon
so has part: feature:1465596-1465662:1:exon
so has part: feature:1469512-1469583:1:exon

XP_032835702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1442845-1442937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1454399-1454500:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1456230-1456375:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1459810-1459893:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1465596-1465662:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1469512-1469583:1:exon

LOC116957577
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1496086..>1574733)
location: region:1496086-1574733:-1
so has part: feature:1496086-1574733:-1:exon
subclass of: SO_0000010

116957577
type: Gene
SIO_000068: ncbigene

position:1496086:-1
position: 1496086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574733:-1
position: 1574733
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1496086-1574733:-1:exon

LOC116957577
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957577
product: large neutral amino acids transporter small subunit 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032979818.1
SIO_010081: LOC116957577
subclass of: SO_0000673
so part of: LOC116957577
location: complement(join(1496086..1496444,1500253..1500376,1503170..1503243,1503755..1503905,1506317..1506455,1511457..1511468,1527789..1527944,1534349..1534614,1540951..1541084,1543430..1543522,1567815..1567891,1570027..1570082,1574378..>1574733))
location: region:1496086-1574733:-1
so has part: feature:1574378-1574733:-1:exon
so has part: feature:1570027-1570082:-1:exon
so has part: feature:1567815-1567891:-1:exon
so has part: feature:1543430-1543522:-1:exon
so has part: feature:1540951-1541084:-1:exon
so has part: feature:1534349-1534614:-1:exon
so has part: feature:1527789-1527944:-1:exon
so has part: feature:1511457-1511468:-1:exon
so has part: feature:1506317-1506455:-1:exon
so has part: feature:1503755-1503905:-1:exon
so has part: feature:1503170-1503243:-1:exon
so has part: feature:1500253-1500376:-1:exon
so has part: feature:1496086-1496444:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1574378-1574733:-1:exon

position:1574378:-1
position: 1574378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1570027-1570082:-1:exon

position:1570027:-1
position: 1570027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1570082:-1
position: 1570082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1567815-1567891:-1:exon

position:1567815:-1
position: 1567815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567891:-1
position: 1567891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1543430-1543522:-1:exon

position:1543430:-1
position: 1543430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1543522:-1
position: 1543522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1540951-1541084:-1:exon

position:1540951:-1
position: 1540951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1541084:-1
position: 1541084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1534349-1534614:-1:exon

position:1534349:-1
position: 1534349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1534614:-1
position: 1534614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1527789-1527944:-1:exon

position:1527789:-1
position: 1527789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1527944:-1
position: 1527944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1511457-1511468:-1:exon

position:1511457:-1
position: 1511457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511468:-1
position: 1511468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1506317-1506455:-1:exon

position:1506317:-1
position: 1506317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1506455:-1
position: 1506455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1503755-1503905:-1:exon

position:1503755:-1
position: 1503755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1503905:-1
position: 1503905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1503170-1503243:-1:exon

position:1503170:-1
position: 1503170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1503243:-1
position: 1503243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1500253-1500376:-1:exon

position:1500253:-1
position: 1500253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1500376:-1
position: 1500376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1496086-1496444:-1:exon

position:1496444:-1
position: 1496444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957577
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: large neutral amino acids transporter small subunit 4-like
translation: GGGGAVDRAAVRADGPTRPLPISDLRPPTSDLRHLTPHSTHPPPPPPTAGVAELSNVTVGANATGGAVATVNGWPVCREQDERLNLAFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSLCFAASCLMLAYGASNPKDLSVLIFVVLALNGFGGMCMTFTSLTLPNMFGNLRSTFISLMIGSYASSAVTFPGVKVIYDLGVPFISILIGWAGLAVFVFFNCFANWPLEPFPGPEDMNYTVKIKLSWLGLDHKVTGRRFYSHVSSVGRRLSSSAGLKDQLKGLPSFSGGSGGGGGGGGGGGGGLQNGRSFFPSTDDIDCKMPGGEGAEDASSPPGFMRSVMTPIMLWSLATMSITQLRLIFYMGAMNSMLEFLAEGDSQQVMDTVSTYTSVFGVLQFLCLATAPVIGFIMDWRLKECIDDDSATSTNGTIELSGQGCAVPTTQRRDRKAQKVQNAMRAFLVTNTLLVLFGVLCLVPNLPLQIVSFVVHTVVRGFIHSAVGGVYAAVYPSSHFGSLTGMQSLVSAVFALVQQPLYIAMMGPLNGDPLWVNVSLLALSLLGFGLPLYLHLYRRRLLAERAARRAAPPLAPPKPPPLLRSSSSNGLIVIPPPAAAAATHDDDDDDDDDDDDDAFSNTWPQQAHSNV
SIO_010081: LOC116957577
subclass of: SO_0000673
so part of: LOC116957577
location: complement(join(1496154..1496444,1500253..1500376,1503170..1503243,1503755..1503905,1506317..1506455,1511457..1511468,1527789..1527944,1534349..1534614,1540951..1541084,1543430..1543522,1567815..1567891,1570027..1570082,1574378..>1574733))
location: region:1496154-1574733:-1
so has part: feature:1574378-1574733:-1:exon
so has part: feature:1570027-1570082:-1:exon
so has part: feature:1567815-1567891:-1:exon
so has part: feature:1543430-1543522:-1:exon
so has part: feature:1540951-1541084:-1:exon
so has part: feature:1534349-1534614:-1:exon
so has part: feature:1527789-1527944:-1:exon
so has part: feature:1511457-1511468:-1:exon
so has part: feature:1506317-1506455:-1:exon
so has part: feature:1503755-1503905:-1:exon
so has part: feature:1503170-1503243:-1:exon
so has part: feature:1500253-1500376:-1:exon
so has part: feature:1496154-1496444:-1:exon

XP_032835709.1
type: Protein
SIO_000068: ncbiprotein

position:1496154:-1
position: 1496154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1574378-1574733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1570027-1570082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1567815-1567891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1543430-1543522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1540951-1541084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1534349-1534614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1527789-1527944:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1511457-1511468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1506317-1506455:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1503755-1503905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1503170-1503243:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1500253-1500376:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1496154-1496444:-1:exon

LOC116957584
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1733290..1737544
location: region:1733290-1737544:1
so has part: feature:1733290-1737544:1:exon
subclass of: SO_0000011

116957584
type: Gene
SIO_000068: ncbigene

position:1733290:1
position: 1733290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1737544:1
position: 1737544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1733290-1737544:1:exon

LOC116957584
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957584
product: uncharacterized LOC116957584
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004405199.1
SIO_010081: LOC116957584
subclass of: SO_0000673
so part of: LOC116957584
location: join(1733290..1733632,1736320..1737544)
location: region:1733290-1737544:1
so has part: feature:1733290-1733632:1:exon
so has part: feature:1736320-1737544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1733290-1733632:1:exon

position:1733632:1
position: 1733632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1736320-1737544:1:exon

position:1736320:1
position: 1736320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SSRP1
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: SSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1742536..1824358
location: region:1742536-1824358:1
so has part: feature:1742536-1824358:1:exon
subclass of: SO_0000010

116957561
type: Gene
SIO_000068: ncbigene

position:1742536:1
position: 1742536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1824358:1
position: 1824358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1742536-1824358:1:exon

SSRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: SSRP1
product: structure specific recognition protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032979794.1
SIO_010081: SSRP1
subclass of: SO_0000673
so part of: SSRP1
location: join(1742536..1742712,1745708..1745893,1765085..1765190,1768368..1768558,1772263..1772493,1775310..1775413,1780986..1781114,1782132..1782353,1786803..1786875,1797451..1797583,1802359..1802404,1803239..1803272,1803432..1803596,1807046..1807231,1815153..1815241,1816800..1817220,1824218..1824358)
location: region:1742536-1824358:1
so has part: feature:1742536-1742712:1:exon
so has part: feature:1745708-1745893:1:exon
so has part: feature:1765085-1765190:1:exon
so has part: feature:1768368-1768558:1:exon
so has part: feature:1772263-1772493:1:exon
so has part: feature:1775310-1775413:1:exon
so has part: feature:1780986-1781114:1:exon
so has part: feature:1782132-1782353:1:exon
so has part: feature:1786803-1786875:1:exon
so has part: feature:1797451-1797583:1:exon
so has part: feature:1802359-1802404:1:exon
so has part: feature:1803239-1803272:1:exon
so has part: feature:1803432-1803596:1:exon
so has part: feature:1807046-1807231:1:exon
so has part: feature:1815153-1815241:1:exon
so has part: feature:1816800-1817220:1:exon
so has part: feature:1824218-1824358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1742536-1742712:1:exon

position:1742712:1
position: 1742712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1745708-1745893:1:exon

position:1745708:1
position: 1745708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1745893:1
position: 1745893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1765085-1765190:1:exon

position:1765085:1
position: 1765085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1765190:1
position: 1765190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1768368-1768558:1:exon

position:1768368:1
position: 1768368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1768558:1
position: 1768558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1772263-1772493:1:exon

position:1772263:1
position: 1772263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1772493:1
position: 1772493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1775310-1775413:1:exon

position:1775310:1
position: 1775310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1775413:1
position: 1775413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1780986-1781114:1:exon

position:1780986:1
position: 1780986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1781114:1
position: 1781114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1782132-1782353:1:exon

position:1782132:1
position: 1782132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1782353:1
position: 1782353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1786803-1786875:1:exon

position:1786803:1
position: 1786803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1786875:1
position: 1786875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1797451-1797583:1:exon

position:1797451:1
position: 1797451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1797583:1
position: 1797583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1802359-1802404:1:exon

position:1802359:1
position: 1802359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1802404:1
position: 1802404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1803239-1803272:1:exon

position:1803239:1
position: 1803239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1803272:1
position: 1803272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1803432-1803596:1:exon

position:1803432:1
position: 1803432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1803596:1
position: 1803596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1807046-1807231:1:exon

position:1807046:1
position: 1807046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1807231:1
position: 1807231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1815153-1815241:1:exon

position:1815153:1
position: 1815153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1815241:1
position: 1815241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1816800-1817220:1:exon

position:1816800:1
position: 1816800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1817220:1
position: 1817220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1824218-1824358:1:exon

position:1824218:1
position: 1824218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SSRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: SSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FACT complex subunit SSRP1
translation: MTDVLEFNEVFQEVKGVMMDGRLRLGRQGVVFKNQRTGKVDSVSGAELSEGLWRRVARGHGLRLSTHAGMVHKFHGFRDNEFEKLAVFFRTHYKLELQQKELCVKGWNWGSVKFAGQLLSFDVGDVTSFEIPLGTVSQCATGKNEVTLEFHQNDDTDVSLMEVRFYVPPGQEGGADAVEVFSQSVLSKADVIQATGDALCIFRELQCLTPRGRYDIRIYPSFLHLHGKTFDYKIPYTTVLRLFLLPHKDQRQIFFVVSLDPPIKQGQTRYHFLILLFSKDETDTLTISMSEEELAKRFEGKLQMEMTGPLHELVGRIMKALVNRKITVPGTFLGHAGSSCITCSYKASSGFLYPLERGFIYVHKPPIHVRFDEISSVNFARGNTTTRSFDFEVETRQGHVYTFSSIEREEYGKLFDFVNGKKLNIKNRGLKQGMVKYDEELVDSDDEEHDAYLVRMKEEGKIREEAGDSNNSGESTDESFNPGDEEDDVAEEFDSNAESSASSDDDDEDEEEEEEEGEKRKRKKPARKEVKSQEKPSRKAASSRAKRSEDGGKRAKGEGKKRREKKAKDPAAPKRPQSAYFLWLNSSRERIRSENPGIALTELSRKAGEQWQSMGADVKKEWERKADEGKREYAAAMTEYRSSGAADAHKELMSRREKPSSPPPSSSSSKKTSGTSSSRKPKAAAAATSSPIVAKSKEYVSSSSGSSSSSGGDDDDSDGDGDSQAKKKKEKEVAAKKEVAKKEVAAKKEVAKKEVAKKEAAAKKEVARKRPAASPAGKKKKQKKGGDSSEGSDDDDEMEEEEEEAVSTPSSSKSDDD
SIO_010081: SSRP1
subclass of: SO_0000673
so part of: SSRP1
location: join(1742659..1742712,1745708..1745893,1765085..1765190,1768368..1768558,1772263..1772493,1775310..1775413,1780986..1781114,1782132..1782353,1786803..1786875,1797451..1797583,1802359..1802404,1803239..1803272,1803432..1803596,1807046..1807231,1815153..1815241,1816800..1817220,1824218..1824301)
location: region:1742659-1824301:1
so has part: feature:1742659-1742712:1:exon
so has part: feature:1745708-1745893:1:exon
so has part: feature:1765085-1765190:1:exon
so has part: feature:1768368-1768558:1:exon
so has part: feature:1772263-1772493:1:exon
so has part: feature:1775310-1775413:1:exon
so has part: feature:1780986-1781114:1:exon
so has part: feature:1782132-1782353:1:exon
so has part: feature:1786803-1786875:1:exon
so has part: feature:1797451-1797583:1:exon
so has part: feature:1802359-1802404:1:exon
so has part: feature:1803239-1803272:1:exon
so has part: feature:1803432-1803596:1:exon
so has part: feature:1807046-1807231:1:exon
so has part: feature:1815153-1815241:1:exon
so has part: feature:1816800-1817220:1:exon
so has part: feature:1824218-1824301:1:exon

XP_032835685.1
type: Protein
SIO_000068: ncbiprotein

position:1742659:1
position: 1742659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1824301:1
position: 1824301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1742659-1742712:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745708-1745893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1765085-1765190:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1768368-1768558:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1772263-1772493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1775310-1775413:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1780986-1781114:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1782132-1782353:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1786803-1786875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1797451-1797583:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1802359-1802404:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1803239-1803272:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1803432-1803596:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1807046-1807231:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1815153-1815241:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1816800-1817220:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1824218-1824301:1:exon

LOC116957592
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957592
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1887425..1887531
location: region:1887425-1887531:1
so has part: feature:1887425-1887531:1:exon
subclass of: SO_0000623

116957592
type: Gene
SIO_000068: ncbigene

position:1887425:1
position: 1887425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1887531:1
position: 1887531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1887425-1887531:1:exon

LOC116957592
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: snRNA
gene: LOC116957592
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004405204.1
SIO_010081: LOC116957592
subclass of: SO_0000673
so part of: LOC116957592
location: 1887425..1887531
location: region:1887425-1887531:1
so has part: feature:1887425-1887531:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1887425-1887531:1:exon

LOC116957578
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1895387..1916616)
location: region:1895387-1916616:-1
so has part: feature:1895387-1916616:-1:exon
subclass of: SO_0000010

116957578
type: Gene
SIO_000068: ncbigene

position:1895387:-1
position: 1895387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1916616:-1
position: 1916616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1895387-1916616:-1:exon

LOC116957578
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957578
product: hapless 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 55% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032979819.1
SIO_010081: LOC116957578
subclass of: SO_0000673
so part of: LOC116957578
location: complement(join(1895387..1895458,1898868..1899585,1899697..1900417,1900835..1900931,1901175..1901369,1901601..1901926,1903558..1903903,1916571..1916616))
location: region:1895387-1916616:-1
so has part: feature:1916571-1916616:-1:exon
so has part: feature:1903558-1903903:-1:exon
so has part: feature:1901601-1901926:-1:exon
so has part: feature:1901175-1901369:-1:exon
so has part: feature:1900835-1900931:-1:exon
so has part: feature:1899697-1900417:-1:exon
so has part: feature:1898868-1899585:-1:exon
so has part: feature:1895387-1895458:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1916571-1916616:-1:exon

position:1916571:-1
position: 1916571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1903558-1903903:-1:exon

position:1903558:-1
position: 1903558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1903903:-1
position: 1903903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1901601-1901926:-1:exon

position:1901601:-1
position: 1901601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1901926:-1
position: 1901926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1901175-1901369:-1:exon

position:1901175:-1
position: 1901175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1901369:-1
position: 1901369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1900835-1900931:-1:exon

position:1900835:-1
position: 1900835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1900931:-1
position: 1900931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1899697-1900417:-1:exon

position:1899697:-1
position: 1899697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1900417:-1
position: 1900417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1898868-1899585:-1:exon

position:1898868:-1
position: 1898868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1899585:-1
position: 1899585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1895387-1895458:-1:exon

position:1895458:-1
position: 1895458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957578
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hapless 2-like
translation: MAAAAPRSDGGGGGGGGGGGGGGGGGGGGGGGGGGGQRGLQRALTSADMPVRGTVLELLGRPLPAAAAAAAGTGLKPSSTPSTETNPPGKTSSSSSPSSASTASTASSASTASAASAAAAAPGVGEEPETPARPAASAVSLGPDELHPGGRRPRLKSVAGLAAMFEAAAPPPPRQQQTQRRGRPRSMFASLDLPTVTAATAAATTAVTVATTAVTVATTAVTVATAVEAEALPGSRPPAGPAARETQPVASLAAGNARPAEPRTKRPAGEAAAAGGGGGGGGGGGGGGGGGGGGVAMTAFYLQGSSPDGERPAGPTWEQEAGTEEAAEEEEEAEERGEARRRRLREARGGRAAEPSSSPAAGEASGRARGSPSSSSSSSSSSRSSSSRSGDDLKRRIRDYKRSAADETPKAEGSAGKKKEEKKEGKEEKEGKEENKEEKKEEEKEEEKEEKKEEKKEQKKEEKKEEEKEEEVRSRRRLPPTIRWIKPPGSASPTATSPLHSRSFYERGRDGGGGGGGGGGRRRSPDGDAGDRPEARRPLAEPVAAIAEIRGLLPEAAGDAAAAAAGSERRRRSRRSAPSEPAPSVAPEARRSSPGAGGGLRAVGRAGGGRRGDPARFPRSPARLAGAAADLTAADVAVRRKLEGPGGDRGRGAAAEVLASDAGDVRGDAATAVVSPRGSESPWGRRSGRPLRRLADPAPGLRRRRRQIGGGREGSAGGRRRAAEAARRRPPRGAGGVRLGPRARGLRSGGGSGEAAEVLRPTPRRDKPSWMSPLPDELGPSR
SIO_010081: LOC116957578
subclass of: SO_0000673
so part of: LOC116957578
location: complement(join(1895387..1895458,1898868..1899585,1899697..1900417,1900835..1900931,1901175..1901369,1901601..1901926,1903558..1903777))
location: region:1895387-1903777:-1
so has part: feature:1903558-1903777:-1:exon
so has part: feature:1901601-1901926:-1:exon
so has part: feature:1901175-1901369:-1:exon
so has part: feature:1900835-1900931:-1:exon
so has part: feature:1899697-1900417:-1:exon
so has part: feature:1898868-1899585:-1:exon
so has part: feature:1895387-1895458:-1:exon

XP_032835710.1
type: Protein
SIO_000068: ncbiprotein

position:1903777:-1
position: 1903777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1903558-1903777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1901601-1901926:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1901175-1901369:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1900835-1900931:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1899697-1900417:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1898868-1899585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1895387-1895458:-1:exon