Petromyzon marinus isolate kPetMar1 chromosome 73, kPetMar1.pri, whole genome shotgun sequence.
type: Entry
definition: Petromyzon marinus isolate kPetMar1 chromosome 73, kPetMar1.pri, whole genome shotgun sequence.
sequence version: NC_046141.1
sequence date: 2020-03-20
sequence: sequence
division: CON
label: NC_046141.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA611764
dblink: SAMN12629506
keyword: WGS
keyword: RefSeq
source: Petromyzon marinus (sea lamprey)
organism: Petromyzon marinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021513.1.\nAssembly name: kPetMar1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/24. The original whole-genome shotgun project has the\naccession JAAIYE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-DEC-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_dups v. github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n scaff10x v. 4.1.0; Bionano Solve DLS v.\n 3.2.1; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. smrtlink_6.0.0.47841;\n longranger align v. 2.2.2; freebayes\n Illumina polishing v. 1.3.1; gEVAL manual\n curation v. 2019-12-09; VGP assembly\n pipeline individual v. 1.6\nAssembly Name :: kPetMar1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 62.36x\nSequencing Technology :: PacBio Sequel I CLR; llumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Petromyzon marinus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 2781428
topology: linear
so has quality: SO_0000987
location: 1..2781428
location: region:1-2781428:1
RO_0002162: 7757

NC_046141
type: RefSeq
SIO_000068: refseq

PRJNA611764
type: BioProject
SIO_000068: bioproject

SAMN12629506
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2781428:1
position: 2781428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2781428:1:source
so part of: sequence
organism: Petromyzon marinus
mol type: genomic DNA
isolate: kPetMar1
chromosome: 73
sex: male
tissue type: sperm
dev stage: adult
country: USA: Great Lakes Fisheries Commission
lat lon: 42.2821 N 83.74847 W
collection date: 12-Jun-2018
collected by: Jeremiah Smith

7757
type: Taxonomy
SIO_000068: taxonomy

LOC116957356
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 55202..73918
location: region:55202-73918:1
so has part: feature:55202-73918:1:exon
subclass of: SO_0000010

116957356
type: Gene
SIO_000068: ncbigene

position:55202:1
position: 55202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73918:1
position: 73918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55202-73918:1:exon

LOC116957356
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957356
product: interferon-induced very large GTPase 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_032979463.1
SIO_010081: LOC116957356
subclass of: SO_0000673
so part of: LOC116957356
location: join(55202..55490,61589..61688,63224..73918)
location: region:55202-73918:1
so has part: feature:55202-55490:1:exon
so has part: feature:61589-61688:1:exon
so has part: feature:63224-73918:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55202-55490:1:exon

position:55490:1
position: 55490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:61589-61688:1:exon

position:61589:1
position: 61589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61688:1
position: 61688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:63224-73918:1:exon

position:63224:1
position: 63224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957356
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced very large GTPase 1-like
translation: MSEEEDHDIKAQDELAKVLTDLGLNTTFWITKLRDILCITNVQALQYCGPEEFEIIEPHCRHSWEKKALCKLMKMSGNEVILKQSQQCEPIGNKQEQDTPTKQHPEQIHQKILTRSDNSNIETETEQRMELKGAKENPLRDGNHSTDMANTYLKQLDLSDISTLRGTISHISLLQYASKGLVLEGVYRTGQINDMLKKRGKLLNIPMSFDLAGPVHQPMIKQQEFSSSEEENIFETAVEKLGFNTITTEEGFLQALNEEITSRHSKALHTEKKQQKNPTDTCIHSVKYLYLPLASGSLNFDQLKLSDEALEELQSIENTLKNVNESFKTRVLSSRFGSFFENFGSHAHTGPVHFGGIFKWKASAEGISSDEEKEERNMLSEAVERYSTSAYNSSGCGGGGDSMMASEFTTEFSEKYNATPLSKVTISVGTIGGSPGICSFQQWKTDIVSNTKTWTVIDLGTSLVPVWDIVTFNHKDYFKNTLIASRLKEAYTLLTNQNPNFGLEDKLVSANAKARSVMQDIKQWQESDMEYNLEKILDLKQTLYDETKSNLIWINTCLSHPAFQSFLSNLVTAPAKTVKIKKLMRSIMEPNSCEVNSFPQFASIMQWLNEYERVPNHLSEFIDLVNILTKAEEHLKVDFSPTYSEIHEKNKEITHSFNSLCQSLRTTKLIEQELLIISVASAVGYCVKEKRFQHPLNYDNIDHLQRALESAYGEYSRLMEQDKSRAQAYVLRTGLSNARTPAEKQKQFDFMRSQIEATMCAEVSHVIKCSEIRPTDWNKLDMMLESIIVGTLRQEELQNKPSIQPRKNNEELLNLLERLALINYYPKKLHTSDVCVVNRSPIQTNPDRCTEQELALSYLQKLMMIDYRARCVSFQCNNLNKGKLNNLSQSTYTHKSPNSDNFFSDDKNDDDIINNRDSPSTNTETHIHPMDLQMAIFHCGDNFVRQYIFTKLSFIQFALPLLVPNPCCSEIEFPIWSFRQIKKSWKYRDASTTKWKSKNCAISDANTALVSFVRFGESPTSKSQIMNSLLGKQKHEVFFHRHCRGSSRNGQLMKGVAEIAWYLPGGKDDDVFNDCIAFTNLHGDAREHKTQVQFLHEISSINVILLSDGDRNEEGKRILDECLSSPKPLVCLCADNKRVSSGVSGTNAKIAVGNRNEAELIDELTSIIKFYLDNSKRNINIEACSDIARQYGFIVDEDDKQCLEGKDMAKVLLSLISNKPLCSIKETFLPLQGKLWQSWCKKDKELTRMKVKGGLSVEEHKSNISMEKTLIRKEQLEKAFPLNDFMRSLIIILTKKSCTVKTYFMHWLRIYLENMSADRLSQLNLTYHQVWTAIIQLKKQGSNTTTIAAKQSELDKISEELDASSFGIYHVFREVGQIYEASQTTPSVEKLPATLSKIAAEMMISGFPLELMDGDAAHVPLIWISSILDGIINEIGNVRLFVISILGIQSSGKSTLLNAMFGLQFPVGSGRCTQGAYMQLVKVEAEFSKQLGYDFVLIVDTEGLRSVELSNATHSHDNELATFVIGLGNMTVINIFGENPSEMQDILQIAVQAFLRMRQVKLSPSCVFVHQNVGDVTAHNKNMEGRRRFQEKLDEMTRMAAAQEQCAVESFDAVIRFDVNSQIRYFAHLWEGDPPMAPPNPSYCQNIKDLKEMLLRNAKKEKTVNVLKISEFKARIKDLWTALLAENFVFSFKNTLEIAAYTKLEEMYGKWTWELRSDVLQQENKLYNSIDNNTDAMTRSQIELRILSNYQDIKNKMEEHFNSADDAEMLVQWKVKFEKGFETVKEELLSDAYKNYTALMAQKDKKRNLDLQRSSYEDQLIRKSKDLASKLRDKNVNDGQWDRHFDKIWQEWIKVIKDSMTSPATLDVKTQIENLLYEVNENQIKHLQTAICHYHIGTEFYVNQNEHIMMGTKWLGSRSHHFKDEDMESIKKLITDIKFNVNRCITTQEKHKTNFNSSYIYEILEVINSEIQEFSQSNKRFMLTDKFKINLSVHILAAVT…
SIO_010081: LOC116957356
subclass of: SO_0000673
so part of: LOC116957356
location: 63227..70381
location: region:63227-70381:1
so has part: feature:63227-70381:1:exon

XP_032835354.1
type: Protein
SIO_000068: ncbiprotein

position:63227:1
position: 63227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70381:1
position: 70381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63227-70381:1:exon

LOC116957364
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957364
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(102495..114745)
location: region:102495-114745:-1
so has part: feature:102495-114745:-1:exon
subclass of: SO_0000010

116957364
type: Gene
SIO_000068: ncbigene

position:102495:-1
position: 102495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114745:-1
position: 114745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102495-114745:-1:exon

LOC116957364
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957364
product: filamin-B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032979478.1
SIO_010081: LOC116957364
subclass of: SO_0000673
so part of: LOC116957364
location: complement(join(102495..102817,114231..114745))
location: region:102495-114745:-1
so has part: feature:114231-114745:-1:exon
so has part: feature:102495-102817:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114231-114745:-1:exon

position:114231:-1
position: 114231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:102495-102817:-1:exon

position:102817:-1
position: 102817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957364
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957364
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: filamin-B-like
translation: MYSSQGGDPRDDLLHCRHRHADDGGERTPHAMKHTGNVIYNVTYTVTEMGNSILIVKWGDDCIPGSLFHITVSGSYG
SIO_010081: LOC116957364
subclass of: SO_0000673
so part of: LOC116957364
location: complement(join(102634..102817,114231..114280))
location: region:102634-114280:-1
so has part: feature:114231-114280:-1:exon
so has part: feature:102634-102817:-1:exon

XP_032835369.1
type: Protein
SIO_000068: ncbiprotein

position:102634:-1
position: 102634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114280:-1
position: 114280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114231-114280:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102634-102817:-1:exon

LOC116957359
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957359
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 108295..111685
location: region:108295-111685:1
so has part: feature:108295-111685:1:exon
subclass of: SO_0000010

116957359
type: Gene
SIO_000068: ncbigene

position:108295:1
position: 108295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111685:1
position: 111685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108295-111685:1:exon

LOC116957359
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957359
product: dual specificity tyrosine-phosphorylation-regulated kinase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_032979473.1
SIO_010081: LOC116957359
subclass of: SO_0000673
so part of: LOC116957359
location: join(108295..108481,109108..109256,109470..109603,109859..110005,110508..110646,111543..111685)
location: region:108295-111685:1
so has part: feature:108295-108481:1:exon
so has part: feature:109108-109256:1:exon
so has part: feature:109470-109603:1:exon
so has part: feature:109859-110005:1:exon
so has part: feature:110508-110646:1:exon
so has part: feature:111543-111685:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108295-108481:1:exon

position:108481:1
position: 108481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:109108-109256:1:exon

position:109108:1
position: 109108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109256:1
position: 109256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:109470-109603:1:exon

position:109470:1
position: 109470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109603:1
position: 109603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:109859-110005:1:exon

position:109859:1
position: 109859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110005:1
position: 110005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:110508-110646:1:exon

position:110508:1
position: 110508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110646:1
position: 110646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:111543-111685:1:exon

position:111543:1
position: 111543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957359
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957359
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity tyrosine-phosphorylation-regulated kinase 2-like
translation: MAKAEEKVGSRSGVQWSALPTSDGVAIASSKTPREILKLFGDFLTPTERSEVLTVNNIWYFGVHNKGFGTQNHGYDDVYNHYVSVEHEHLNFRYEVLKKVVGPYSQIFKCRDHKTNTRVAVKMWRQSFSAEEDHSQWMEYHILLQLQGWANDDVNVVRILDFFTFRGHNCLVMQLIPKRRLLSAVDCTAPQHMEMTMVKLFTKSILKFLIQLHAKGIVHGDIKPRNMSIKEPGAGTIRMMSFENSFLVGRQRES
SIO_010081: LOC116957359
subclass of: SO_0000673
so part of: LOC116957359
location: join(108379..108481,109108..109256,109470..109603,109859..110005,110508..110646,111543..111635)
location: region:108379-111635:1
so has part: feature:108379-108481:1:exon
so has part: feature:109108-109256:1:exon
so has part: feature:109470-109603:1:exon
so has part: feature:109859-110005:1:exon
so has part: feature:110508-110646:1:exon
so has part: feature:111543-111635:1:exon

XP_032835364.1
type: Protein
SIO_000068: ncbiprotein

position:108379:1
position: 108379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111635:1
position: 111635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108379-108481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109108-109256:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109470-109603:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109859-110005:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:110508-110646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111543-111635:1:exon

LOC116957366
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(109021..109804)
location: region:109021-109804:-1
so has part: feature:109021-109804:-1:exon
subclass of: SO_0000011

116957366
type: Gene
SIO_000068: ncbigene

position:109021:-1
position: 109021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109804:-1
position: 109804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109021-109804:-1:exon

LOC116957366
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957366
product: uncharacterized LOC116957366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XR_004405160.1
SIO_010081: LOC116957366
subclass of: SO_0000673
so part of: LOC116957366
location: complement(join(109021..109329,109485..109804))
location: region:109021-109804:-1
so has part: feature:109485-109804:-1:exon
so has part: feature:109021-109329:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109485-109804:-1:exon

position:109485:-1
position: 109485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:109021-109329:-1:exon

position:109329:-1
position: 109329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957360
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957360
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 112464..117897
location: region:112464-117897:1
so has part: feature:112464-117897:1:exon
subclass of: SO_0000010

116957360
type: Gene
SIO_000068: ncbigene

position:112464:1
position: 112464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117897:1
position: 117897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112464-117897:1:exon

LOC116957360
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957360
product: dual specificity tyrosine-phosphorylation-regulated kinase 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_032979474.1
SIO_010081: LOC116957360
subclass of: SO_0000673
so part of: LOC116957360
location: join(112464..112573,113781..113841,114822..114939,117429..117897)
location: region:112464-117897:1
so has part: feature:112464-112573:1:exon
so has part: feature:113781-113841:1:exon
so has part: feature:114822-114939:1:exon
so has part: feature:117429-117897:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:112464-112573:1:exon

position:112573:1
position: 112573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113781-113841:1:exon

position:113781:1
position: 113781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113841:1
position: 113841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:114822-114939:1:exon

position:114822:1
position: 114822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114939:1
position: 114939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:117429-117897:1:exon

position:117429:1
position: 117429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957360
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity tyrosine-phosphorylation-regulated kinase 4-like
translation: MWGLGCTVAELATGRILFPAINKHDQLPCYMETLGMPPQNLIDGAPGRNKYFDGSGMPLMSGQSRVPGSHPLYLALGSQDTEFHDFISRCLEWDPALRMTPAEALAHSWLRDEEIPRDEEIPRDEEVPRDEEVPSQCVPVVDTSIHSEASAKEENRQWGEPLQKEKKKSRLVRAYRAVCSFFRGFKKCTACDHNAHPGHVHIPHTVYTHARLSEYMSNFRC
SIO_010081: LOC116957360
subclass of: SO_0000673
so part of: LOC116957360
location: join(112478..112573,113781..113841,114822..114939,117429..117819)
location: region:112478-117819:1
so has part: feature:112478-112573:1:exon
so has part: feature:113781-113841:1:exon
so has part: feature:114822-114939:1:exon
so has part: feature:117429-117819:1:exon

XP_032835365.1
type: Protein
SIO_000068: ncbiprotein

position:112478:1
position: 112478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117819:1
position: 117819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112478-112573:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113781-113841:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114822-114939:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117429-117819:1:exon

LOC116957358
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957358
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 120479..147704
location: region:120479-147704:1
so has part: feature:120479-147704:1:exon
subclass of: SO_0000010

116957358
type: Gene
SIO_000068: ncbigene

position:120479:1
position: 120479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147704:1
position: 147704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120479-147704:1:exon

LOC116957358
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957358
product: dual specificity tyrosine-phosphorylation-regulated kinase 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032979468.1
SIO_010081: LOC116957358
subclass of: SO_0000673
so part of: LOC116957358
location: join(120479..122023,141330..141432,142058..142206,142420..142553,142809..142955,143458..143596,144493..144574,145353..145525,146520..146580,147561..147704)
location: region:120479-147704:1
so has part: feature:120479-122023:1:exon
so has part: feature:141330-141432:1:exon
so has part: feature:142058-142206:1:exon
so has part: feature:142420-142553:1:exon
so has part: feature:142809-142955:1:exon
so has part: feature:143458-143596:1:exon
so has part: feature:144493-144574:1:exon
so has part: feature:145353-145525:1:exon
so has part: feature:146520-146580:1:exon
so has part: feature:147561-147704:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:120479-122023:1:exon

position:122023:1
position: 122023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141330-141432:1:exon

position:141330:1
position: 141330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141432:1
position: 141432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:142058-142206:1:exon

position:142058:1
position: 142058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142206:1
position: 142206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:142420-142553:1:exon

position:142420:1
position: 142420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142553:1
position: 142553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:142809-142955:1:exon

position:142809:1
position: 142809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142955:1
position: 142955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:143458-143596:1:exon

position:143458:1
position: 143458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143596:1
position: 143596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:144493-144574:1:exon

position:144493:1
position: 144493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144574:1
position: 144574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:145353-145525:1:exon

position:145353:1
position: 145353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145525:1
position: 145525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:146520-146580:1:exon

position:146520:1
position: 146520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146580:1
position: 146580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:147561-147704:1:exon

position:147561:1
position: 147561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957358
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957358
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X1
translation: MRAETGALSGTPETVPRQPNEPASWDRPAGTIPRFHRGNRYVLVAVEYFTRYPVAVAIPEKTALIVARAFVEHYALKHGIPERLITDQGSEIDAELFHALCREFGIQKDRTTAYHPQANGMVERMNQTLAGKLKCMAAANQQDWDEHLRYALFAYATMVHTSTGQTPLLMMFGRKSHLPTDLLFGVPPPQREEGSCPMDHLMETLREARVRACPQGETAHQRQEWSARPRMEPPFYSAGSKMAKAEEKVGSRSDVQWSALPTSDGVAIASSKTPREILKLFGDFLTPTERSEVLTVNNVWYFGVHNKGFGTQNHGYDDVYNHYVSVEHEHLNFRYEVLKKVVGPYSQIFKCRDHKTNTRVAVKMWRQSFSAEEDHSQWMEYHILLQLQDWANDDVNVVRILDFFTFRGHNCLVMQLIPKRRLLSAVDCTAPQHMEMTMVKLFTKSILKFLIQLHAKGIVHGDIKPRNMSIKEPGAGTIRMMSFENSFLVGRQRSQIFCSHAYLAPEAYLGHMSSFPVDMWGLGCTVAELATGRILFPAINKHDQLPCYMETLGMPPQNLIDGAPGRNKYFDGSGMPLMSGQSRVPGSHPLYLALGSQDTEFHDFISRCLE
SIO_010081: LOC116957358
subclass of: SO_0000673
so part of: LOC116957358
location: join(121301..122023,141330..141432,142058..142206,142420..142553,142809..142955,143458..143596,144493..144574,145353..145525,146520..146580,147561..147682)
location: region:121301-147682:1
so has part: feature:121301-122023:1:exon
so has part: feature:141330-141432:1:exon
so has part: feature:142058-142206:1:exon
so has part: feature:142420-142553:1:exon
so has part: feature:142809-142955:1:exon
so has part: feature:143458-143596:1:exon
so has part: feature:144493-144574:1:exon
so has part: feature:145353-145525:1:exon
so has part: feature:146520-146580:1:exon
so has part: feature:147561-147682:1:exon

XP_032835359.1
type: Protein
SIO_000068: ncbiprotein

position:121301:1
position: 121301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147682:1
position: 147682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121301-122023:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141330-141432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142058-142206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142420-142553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142809-142955:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:143458-143596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:144493-144574:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:145353-145525:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:146520-146580:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147561-147682:1:exon

LOC116957358
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957358
product: dual specificity tyrosine-phosphorylation-regulated kinase 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032979469.1
SIO_010081: LOC116957358
subclass of: SO_0000673
so part of: LOC116957358
location: join(133410..133734,141330..141432,142058..142206,142420..142553,142809..142955,143458..143596,144493..144574,145353..145525,146520..146580,147561..147704)
location: region:133410-147704:1
so has part: feature:133410-133734:1:exon
so has part: feature:141330-141432:1:exon
so has part: feature:142058-142206:1:exon
so has part: feature:142420-142553:1:exon
so has part: feature:142809-142955:1:exon
so has part: feature:143458-143596:1:exon
so has part: feature:144493-144574:1:exon
so has part: feature:145353-145525:1:exon
so has part: feature:146520-146580:1:exon
so has part: feature:147561-147704:1:exon

position:133410:1
position: 133410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133410-133734:1:exon

position:133734:1
position: 133734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141330-141432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142058-142206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142420-142553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142809-142955:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:143458-143596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:144493-144574:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:145353-145525:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:146520-146580:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147561-147704:1:exon

LOC116957358
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957358
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity tyrosine-phosphorylation-regulated kinase 2-like isoform X2
translation: MLTLCWRLAKLFHCCMAKAEEKVGSRSDVQWSALPTSDGVAIASSKTPREILKLFGDFLTPTERSEVLTVNNVWYFGVHNKGFGTQNHGYDDVYNHYVSVEHEHLNFRYEVLKKVVGPYSQIFKCRDHKTNTRVAVKMWRQSFSAEEDHSQWMEYHILLQLQDWANDDVNVVRILDFFTFRGHNCLVMQLIPKRRLLSAVDCTAPQHMEMTMVKLFTKSILKFLIQLHAKGIVHGDIKPRNMSIKEPGAGTIRMMSFENSFLVGRQRSQIFCSHAYLAPEAYLGHMSSFPVDMWGLGCTVAELATGRILFPAINKHDQLPCYMETLGMPPQNLIDGAPGRNKYFDGSGMPLMSGQSRVPGSHPLYLALGSQDTEFHDFISRCLE
SIO_010081: LOC116957358
subclass of: SO_0000673
so part of: LOC116957358
location: join(133690..133734,141330..141432,142058..142206,142420..142553,142809..142955,143458..143596,144493..144574,145353..145525,146520..146580,147561..147682)
location: region:133690-147682:1
so has part: feature:133690-133734:1:exon
so has part: feature:141330-141432:1:exon
so has part: feature:142058-142206:1:exon
so has part: feature:142420-142553:1:exon
so has part: feature:142809-142955:1:exon
so has part: feature:143458-143596:1:exon
so has part: feature:144493-144574:1:exon
so has part: feature:145353-145525:1:exon
so has part: feature:146520-146580:1:exon
so has part: feature:147561-147682:1:exon

XP_032835360.1
type: Protein
SIO_000068: ncbiprotein

position:133690:1
position: 133690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133690-133734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141330-141432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142058-142206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142420-142553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142809-142955:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:143458-143596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:144493-144574:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:145353-145525:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:146520-146580:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147561-147682:1:exon

LOC116957358
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957358
product: dual specificity tyrosine-phosphorylation-regulated kinase 2-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_032979472.1
SIO_010081: LOC116957358
subclass of: SO_0000673
so part of: LOC116957358
location: join(133756..133962,141330..141432,142058..142206,142420..142553,142809..142955,143458..143596,144493..144574,145353..145525,146520..146580,147561..147704)
location: region:133756-147704:1
so has part: feature:133756-133962:1:exon
so has part: feature:141330-141432:1:exon
so has part: feature:142058-142206:1:exon
so has part: feature:142420-142553:1:exon
so has part: feature:142809-142955:1:exon
so has part: feature:143458-143596:1:exon
so has part: feature:144493-144574:1:exon
so has part: feature:145353-145525:1:exon
so has part: feature:146520-146580:1:exon
so has part: feature:147561-147704:1:exon

position:133756:1
position: 133756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133756-133962:1:exon

position:133962:1
position: 133962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141330-141432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142058-142206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142420-142553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142809-142955:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:143458-143596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:144493-144574:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:145353-145525:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:146520-146580:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147561-147704:1:exon

LOC116957365
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957365
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(135811..147522)
location: region:135811-147522:-1
so has part: feature:135811-147522:-1:exon
subclass of: SO_0000010

116957365
type: Gene
SIO_000068: ncbigene

position:135811:-1
position: 135811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147522:-1
position: 147522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135811-147522:-1:exon

LOC116957365
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957365
product: filamin-B-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_032979479.1
SIO_010081: LOC116957365
subclass of: SO_0000673
so part of: LOC116957365
location: complement(join(135811..136857,146970..147522))
location: region:135811-147522:-1
so has part: feature:146970-147522:-1:exon
so has part: feature:135811-136857:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146970-147522:-1:exon

position:146970:-1
position: 146970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:135811-136857:-1:exon

position:136857:-1
position: 136857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957365
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: filamin-B-like
translation: MYSSQGGDPRDDLLHCRHRHADDGGERTPHAMKHTGNVIYNVTYTVPEMGNSILIVKWGDDCIPGSLFCITMSGSYG
SIO_010081: LOC116957365
subclass of: SO_0000673
so part of: LOC116957365
location: complement(join(136674..136857,146970..147019))
location: region:136674-147019:-1
so has part: feature:146970-147019:-1:exon
so has part: feature:136674-136857:-1:exon

XP_032835370.1
type: Protein
SIO_000068: ncbiprotein

position:136674:-1
position: 136674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147019:-1
position: 147019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146970-147019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136674-136857:-1:exon

LOC116957358
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957358
product: dual specificity tyrosine-phosphorylation-regulated kinase 2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_032979470.1
SIO_010081: LOC116957358
subclass of: SO_0000673
so part of: LOC116957358
location: join(138940..139097,141330..141432,142058..142206,142420..142553,142809..142955,143458..143596,144493..144574,145353..145525,146520..146580,147561..147704)
location: region:138940-147704:1
so has part: feature:138940-139097:1:exon
so has part: feature:141330-141432:1:exon
so has part: feature:142058-142206:1:exon
so has part: feature:142420-142553:1:exon
so has part: feature:142809-142955:1:exon
so has part: feature:143458-143596:1:exon
so has part: feature:144493-144574:1:exon
so has part: feature:145353-145525:1:exon
so has part: feature:146520-146580:1:exon
so has part: feature:147561-147704:1:exon

position:138940:1
position: 138940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138940-139097:1:exon

position:139097:1
position: 139097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141330-141432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142058-142206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142420-142553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142809-142955:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:143458-143596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:144493-144574:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:145353-145525:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:146520-146580:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147561-147704:1:exon

LOC116957358
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957358
product: dual specificity tyrosine-phosphorylation-regulated kinase 2-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_032979471.1
SIO_010081: LOC116957358
subclass of: SO_0000673
so part of: LOC116957358
location: join(139245..139509,141330..141432,142058..142206,142420..142553,142809..142955,143458..143596,144493..144574,145353..145525,146520..146580,147561..147704)
location: region:139245-147704:1
so has part: feature:139245-139509:1:exon
so has part: feature:141330-141432:1:exon
so has part: feature:142058-142206:1:exon
so has part: feature:142420-142553:1:exon
so has part: feature:142809-142955:1:exon
so has part: feature:143458-143596:1:exon
so has part: feature:144493-144574:1:exon
so has part: feature:145353-145525:1:exon
so has part: feature:146520-146580:1:exon
so has part: feature:147561-147704:1:exon

position:139245:1
position: 139245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139245-139509:1:exon

position:139509:1
position: 139509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141330-141432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142058-142206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142420-142553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142809-142955:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:143458-143596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:144493-144574:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:145353-145525:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:146520-146580:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147561-147704:1:exon

LOC116957358
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957358
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity tyrosine-phosphorylation-regulated kinase 2-like isoform X3
translation: MAKAEEKVGSRSDVQWSALPTSDGVAIASSKTPREILKLFGDFLTPTERSEVLTVNNVWYFGVHNKGFGTQNHGYDDVYNHYVSVEHEHLNFRYEVLKKVVGPYSQIFKCRDHKTNTRVAVKMWRQSFSAEEDHSQWMEYHILLQLQDWANDDVNVVRILDFFTFRGHNCLVMQLIPKRRLLSAVDCTAPQHMEMTMVKLFTKSILKFLIQLHAKGIVHGDIKPRNMSIKEPGAGTIRMMSFENSFLVGRQRSQIFCSHAYLAPEAYLGHMSSFPVDMWGLGCTVAELATGRILFPAINKHDQLPCYMETLGMPPQNLIDGAPGRNKYFDGSGMPLMSGQSRVPGSHPLYLALGSQDTEFHDFISRCLE
SIO_010081: LOC116957358
subclass of: SO_0000673
so part of: LOC116957358
location: join(141330..141432,142058..142206,142420..142553,142809..142955,143458..143596,144493..144574,145353..145525,146520..146580,147561..147682)
location: region:141330-147682:1
so has part: feature:141330-141432:1:exon
so has part: feature:142058-142206:1:exon
so has part: feature:142420-142553:1:exon
so has part: feature:142809-142955:1:exon
so has part: feature:143458-143596:1:exon
so has part: feature:144493-144574:1:exon
so has part: feature:145353-145525:1:exon
so has part: feature:146520-146580:1:exon
so has part: feature:147561-147682:1:exon

XP_032835361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141330-141432:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142058-142206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142420-142553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142809-142955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143458-143596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:144493-144574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:145353-145525:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146520-146580:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147561-147682:1:exon

LOC116957358
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957358
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity tyrosine-phosphorylation-regulated kinase 2-like isoform X3
translation: MAKAEEKVGSRSDVQWSALPTSDGVAIASSKTPREILKLFGDFLTPTERSEVLTVNNVWYFGVHNKGFGTQNHGYDDVYNHYVSVEHEHLNFRYEVLKKVVGPYSQIFKCRDHKTNTRVAVKMWRQSFSAEEDHSQWMEYHILLQLQDWANDDVNVVRILDFFTFRGHNCLVMQLIPKRRLLSAVDCTAPQHMEMTMVKLFTKSILKFLIQLHAKGIVHGDIKPRNMSIKEPGAGTIRMMSFENSFLVGRQRSQIFCSHAYLAPEAYLGHMSSFPVDMWGLGCTVAELATGRILFPAINKHDQLPCYMETLGMPPQNLIDGAPGRNKYFDGSGMPLMSGQSRVPGSHPLYLALGSQDTEFHDFISRCLE
SIO_010081: LOC116957358
subclass of: SO_0000673
so part of: LOC116957358
location: join(141330..141432,142058..142206,142420..142553,142809..142955,143458..143596,144493..144574,145353..145525,146520..146580,147561..147682)
location: region:141330-147682:1
so has part: feature:141330-141432:1:exon
so has part: feature:142058-142206:1:exon
so has part: feature:142420-142553:1:exon
so has part: feature:142809-142955:1:exon
so has part: feature:143458-143596:1:exon
so has part: feature:144493-144574:1:exon
so has part: feature:145353-145525:1:exon
so has part: feature:146520-146580:1:exon
so has part: feature:147561-147682:1:exon

XP_032835362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141330-141432:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142058-142206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142420-142553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142809-142955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143458-143596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:144493-144574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:145353-145525:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146520-146580:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147561-147682:1:exon

LOC116957358
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957358
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity tyrosine-phosphorylation-regulated kinase 2-like isoform X3
translation: MAKAEEKVGSRSDVQWSALPTSDGVAIASSKTPREILKLFGDFLTPTERSEVLTVNNVWYFGVHNKGFGTQNHGYDDVYNHYVSVEHEHLNFRYEVLKKVVGPYSQIFKCRDHKTNTRVAVKMWRQSFSAEEDHSQWMEYHILLQLQDWANDDVNVVRILDFFTFRGHNCLVMQLIPKRRLLSAVDCTAPQHMEMTMVKLFTKSILKFLIQLHAKGIVHGDIKPRNMSIKEPGAGTIRMMSFENSFLVGRQRSQIFCSHAYLAPEAYLGHMSSFPVDMWGLGCTVAELATGRILFPAINKHDQLPCYMETLGMPPQNLIDGAPGRNKYFDGSGMPLMSGQSRVPGSHPLYLALGSQDTEFHDFISRCLE
SIO_010081: LOC116957358
subclass of: SO_0000673
so part of: LOC116957358
location: join(141330..141432,142058..142206,142420..142553,142809..142955,143458..143596,144493..144574,145353..145525,146520..146580,147561..147682)
location: region:141330-147682:1
so has part: feature:141330-141432:1:exon
so has part: feature:142058-142206:1:exon
so has part: feature:142420-142553:1:exon
so has part: feature:142809-142955:1:exon
so has part: feature:143458-143596:1:exon
so has part: feature:144493-144574:1:exon
so has part: feature:145353-145525:1:exon
so has part: feature:146520-146580:1:exon
so has part: feature:147561-147682:1:exon

XP_032835363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141330-141432:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142058-142206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142420-142553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142809-142955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143458-143596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:144493-144574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:145353-145525:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146520-146580:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147561-147682:1:exon

LOC116957365
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7757
gene: LOC116957365
product: filamin-B-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XR_004405159.1
SIO_010081: LOC116957365
so part of: LOC116957365
location: complement(join(142048..142525,146970..147195))
location: region:142048-147195:-1
so has part: feature:146970-147195:-1:exon
so has part: feature:142048-142525:-1:exon

position:142048:-1
position: 142048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147195:-1
position: 147195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146970-147195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142048-142525:-1:exon

position:142525:-1
position: 142525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957361
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957361
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 165009..193076
location: region:165009-193076:1
so has part: feature:165009-193076:1:exon
subclass of: SO_0000010

116957361
type: Gene
SIO_000068: ncbigene

position:165009:1
position: 165009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193076:1
position: 193076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165009-193076:1:exon

LOC116957361
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957361
product: dual specificity tyrosine-phosphorylation-regulated kinase 4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032979475.1
SIO_010081: LOC116957361
subclass of: SO_0000673
so part of: LOC116957361
location: join(165009..165116,191166..191268,191894..192042,192256..192389,192643..193076)
location: region:165009-193076:1
so has part: feature:165009-165116:1:exon
so has part: feature:191166-191268:1:exon
so has part: feature:191894-192042:1:exon
so has part: feature:192256-192389:1:exon
so has part: feature:192643-193076:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:165009-165116:1:exon

position:165116:1
position: 165116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:191166-191268:1:exon

position:191166:1
position: 191166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191268:1
position: 191268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:191894-192042:1:exon

position:191894:1
position: 191894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192042:1
position: 192042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:192256-192389:1:exon

position:192256:1
position: 192256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192389:1
position: 192389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:192643-193076:1:exon

position:192643:1
position: 192643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957361
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957361
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X1
translation: MIPSVGLASGLFFILSESLSLCSRSLRTFMMMAKAEEKVGSRSDVQWSALPTSDGVAIASSKTPREILKLFGDFLTPTERSEVLTVNNIWYFGVHNKGFGTQNHGYDDVYNHYVSVEHEHLNFRYEVLKKVVGPYSQIFKCRDHKTNTRVAVKMWRQSFSAEEDHSQWMEYHILLQLQGWANDDVNVVRILDFFTFRGHNCLVMQLIPKYVPRCLSS
SIO_010081: LOC116957361
subclass of: SO_0000673
so part of: LOC116957361
location: join(165024..165116,191166..191268,191894..192042,192256..192389,192643..192817)
location: region:165024-192817:1
so has part: feature:165024-165116:1:exon
so has part: feature:191166-191268:1:exon
so has part: feature:191894-192042:1:exon
so has part: feature:192256-192389:1:exon
so has part: feature:192643-192817:1:exon

XP_032835366.1
type: Protein
SIO_000068: ncbiprotein

position:165024:1
position: 165024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192817:1
position: 192817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165024-165116:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191166-191268:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191894-192042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192256-192389:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192643-192817:1:exon

LOC116957361
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957361
product: dual specificity tyrosine-phosphorylation-regulated kinase 4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_032979476.1
SIO_010081: LOC116957361
subclass of: SO_0000673
so part of: LOC116957361
location: join(189045..189187,191166..191268,191894..192042,192256..192389,192643..192832)
location: region:189045-192832:1
so has part: feature:189045-189187:1:exon
so has part: feature:191166-191268:1:exon
so has part: feature:191894-192042:1:exon
so has part: feature:192256-192389:1:exon
so has part: feature:192643-192832:1:exon

position:189045:1
position: 189045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192832:1
position: 192832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189045-189187:1:exon

position:189187:1
position: 189187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:191166-191268:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191894-192042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192256-192389:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192643-192832:1:exon

LOC116957361
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957361
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity tyrosine-phosphorylation-regulated kinase 4-like isoform X2
translation: MAKAEEKVGSRSDVQWSALPTSDGVAIASSKTPREILKLFGDFLTPTERSEVLTVNNIWYFGVHNKGFGTQNHGYDDVYNHYVSVEHEHLNFRYEVLKKVVGPYSQIFKCRDHKTNTRVAVKMWRQSFSAEEDHSQWMEYHILLQLQGWANDDVNVVRILDFFTFRGHNCLVMQLIPKYVPRCLSS
SIO_010081: LOC116957361
subclass of: SO_0000673
so part of: LOC116957361
location: join(191166..191268,191894..192042,192256..192389,192643..192817)
location: region:191166-192817:1
so has part: feature:191166-191268:1:exon
so has part: feature:191894-192042:1:exon
so has part: feature:192256-192389:1:exon
so has part: feature:192643-192817:1:exon

XP_032835367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191166-191268:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191894-192042:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192256-192389:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192643-192817:1:exon

LOC116957363
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957363
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 193303..195376
location: region:193303-195376:1
so has part: feature:193303-195376:1:exon
subclass of: SO_0000010

116957363
type: Gene
SIO_000068: ncbigene

position:193303:1
position: 193303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195376:1
position: 195376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193303-195376:1:exon

LOC116957363
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957363
product: dual specificity tyrosine-phosphorylation-regulated kinase 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_032979477.1
SIO_010081: LOC116957363
subclass of: SO_0000673
so part of: LOC116957363
location: join(193303..193431,194328..194409,195183..195376)
location: region:193303-195376:1
so has part: feature:193303-193431:1:exon
so has part: feature:194328-194409:1:exon
so has part: feature:195183-195376:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193303-193431:1:exon

position:193431:1
position: 193431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194328-194409:1:exon

position:194328:1
position: 194328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194409:1
position: 194409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:195183-195376:1:exon

position:195183:1
position: 195183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957363
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957363
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity tyrosine-phosphorylation-regulated kinase 4-like
translation: MEMTMVKLFTKSILKFLIQLHAKGIVHGDIKPRNMSIKEPGAGTIRMMSFENSFLVGRQRSQNFCSHAYLAPEVYLGHMSSFPVDMWGLGCTVAELATGRILFPAINKLDQLPCYMEVLPTQQ
SIO_010081: LOC116957363
subclass of: SO_0000673
so part of: LOC116957363
location: join(193336..193431,194328..194409,195183..195376)
location: region:193336-195376:1
so has part: feature:193336-193431:1:exon
so has part: feature:194328-194409:1:exon
so has part: feature:195183-195376:1:exon

XP_032835368.1
type: Protein
SIO_000068: ncbiprotein

position:193336:1
position: 193336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193336-193431:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194328-194409:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195183-195376:1:exon

LOC116957367
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957367
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(197507..199500)
location: region:197507-199500:-1
so has part: feature:197507-199500:-1:exon
subclass of: SO_0000011

116957367
type: Gene
SIO_000068: ncbigene

position:197507:-1
position: 197507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199500:-1
position: 199500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197507-199500:-1:exon

LOC116957367
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957367
product: uncharacterized LOC116957367
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XR_004405161.1
SIO_010081: LOC116957367
subclass of: SO_0000673
so part of: LOC116957367
location: complement(join(197507..197564,197752..198207,199365..199500))
location: region:197507-199500:-1
so has part: feature:199365-199500:-1:exon
so has part: feature:197752-198207:-1:exon
so has part: feature:197507-197564:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:199365-199500:-1:exon

position:199365:-1
position: 199365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197752-198207:-1:exon

position:197752:-1
position: 197752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198207:-1
position: 198207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:197507-197564:-1:exon

position:197564:-1
position: 197564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957357
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957357
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(208260..224550)
location: region:208260-224550:-1
so has part: feature:208260-224550:-1:exon
subclass of: SO_0000010

116957357
type: Gene
SIO_000068: ncbigene

position:208260:-1
position: 208260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224550:-1
position: 224550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208260-224550:-1:exon

LOC116957357
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957357
product: uncharacterized LOC116957357, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 105 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032979466.1
SIO_010081: LOC116957357
subclass of: SO_0000673
so part of: LOC116957357
location: complement(join(208260..211331,212428..212598,213431..213549,215212..215349,217787..217898,218146..218256,221158..221239,224452..224550))
location: region:208260-224550:-1
so has part: feature:224452-224550:-1:exon
so has part: feature:221158-221239:-1:exon
so has part: feature:218146-218256:-1:exon
so has part: feature:217787-217898:-1:exon
so has part: feature:215212-215349:-1:exon
so has part: feature:213431-213549:-1:exon
so has part: feature:212428-212598:-1:exon
so has part: feature:208260-211331:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224452-224550:-1:exon

position:224452:-1
position: 224452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221158-221239:-1:exon

position:221158:-1
position: 221158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221239:-1
position: 221239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:218146-218256:-1:exon

position:218146:-1
position: 218146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218256:-1
position: 218256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:217787-217898:-1:exon

position:217787:-1
position: 217787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217898:-1
position: 217898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:215212-215349:-1:exon

position:215212:-1
position: 215212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215349:-1
position: 215349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:213431-213549:-1:exon

position:213431:-1
position: 213431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213549:-1
position: 213549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:212428-212598:-1:exon

position:212428:-1
position: 212428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212598:-1
position: 212598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:208260-211331:-1:exon

position:211331:-1
position: 211331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957357
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957357
product: uncharacterized LOC116957357, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 117 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032979465.1
SIO_010081: LOC116957357
subclass of: SO_0000673
so part of: LOC116957357
location: complement(join(208260..211331,212428..212598,213431..213549,215212..215349,217787..217898,218146..218256,221158..221239,224371..224521))
location: region:208260-224521:-1
so has part: feature:224371-224521:-1:exon
so has part: feature:221158-221239:-1:exon
so has part: feature:218146-218256:-1:exon
so has part: feature:217787-217898:-1:exon
so has part: feature:215212-215349:-1:exon
so has part: feature:213431-213549:-1:exon
so has part: feature:212428-212598:-1:exon
so has part: feature:208260-211331:-1:exon

position:224521:-1
position: 224521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224371-224521:-1:exon

position:224371:-1
position: 224371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221158-221239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218146-218256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217787-217898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215212-215349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213431-213549:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:212428-212598:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208260-211331:-1:exon

LOC116957357
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957357
product: uncharacterized LOC116957357, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 101 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032979464.1
SIO_010081: LOC116957357
subclass of: SO_0000673
so part of: LOC116957357
location: complement(join(208260..211331,212428..212598,213431..213549,215212..215349,217787..217898,218146..218256,221158..221239,224176..224229))
location: region:208260-224229:-1
so has part: feature:224176-224229:-1:exon
so has part: feature:221158-221239:-1:exon
so has part: feature:218146-218256:-1:exon
so has part: feature:217787-217898:-1:exon
so has part: feature:215212-215349:-1:exon
so has part: feature:213431-213549:-1:exon
so has part: feature:212428-212598:-1:exon
so has part: feature:208260-211331:-1:exon

position:224229:-1
position: 224229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224176-224229:-1:exon

position:224176:-1
position: 224176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221158-221239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218146-218256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217787-217898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215212-215349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213431-213549:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:212428-212598:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208260-211331:-1:exon

LOC116957357
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957357
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957357 isoform X1
translation: MGIDESMGSVDSWVNIKMHHVTLCGLLLLVTSWPCVFATIVNKVVYKFSTEYEAIWNDRGSGAAVDVSIWRPSSLESGFYPLGDVAVTLHEQPKSASILVRDSGNSLVRAPISVTEVWNDRGSGADRDVTVYRLNPLNGFTCLGHVAVASYSQTPSLNAYRCVNSSHVTQGRLSFVWNDRGSGATRDVSFWSVENDPMLTGITAGTFISHASHSDLGTVPAVLDANKAILSAFLPTSSEVALVLYNTDRVTEMWNDKGSGGKYDVSIWRAQGCCSLGDIAMPNYGQPKGILLRETIPGTLRKPLSFERIWTDRGSGADRDVSIWKPICPPSYHALGFVAEGSHGRVPSVETVRCVNTSHVLRGDWQWVYDDTKTGSSQDVTIWKAVGSGQTANTFKAVTRHGAMDTPSFILNPRFVSVQTGAPVAKVRLVNFIYDFESQVVSNVDPLELTTRTIAENCRAPPGSPPLNVKRKIDVTVTMTSSWSVSTSLAVGVEVTFEAGIPLIAKNQVKVSTTLTRQWEKTITESKSVTDSLEATIDVQAGKSVSYVVTGRRYIGSIPWKATMMTTFEDGSSNIDQVGGIFEGMQVSEIRVSADAPLPCG
SIO_010081: LOC116957357
subclass of: SO_0000673
so part of: LOC116957357
location: complement(join(210298..211331,212428..212598,213431..213549,215212..215349,217787..217898,218146..218256,221158..221239,224176..224214))
location: region:210298-224214:-1
so has part: feature:224176-224214:-1:exon
so has part: feature:221158-221239:-1:exon
so has part: feature:218146-218256:-1:exon
so has part: feature:217787-217898:-1:exon
so has part: feature:215212-215349:-1:exon
so has part: feature:213431-213549:-1:exon
so has part: feature:212428-212598:-1:exon
so has part: feature:210298-211331:-1:exon

XP_032835355.1
type: Protein
SIO_000068: ncbiprotein

position:210298:-1
position: 210298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224214:-1
position: 224214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224176-224214:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:221158-221239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218146-218256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217787-217898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215212-215349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213431-213549:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:212428-212598:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210298-211331:-1:exon

LOC116957357
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957357
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957357 isoform X2
translation: MHHVTLCGLLLLVTSWPCVFATIVNKVVYKFSTEYEAIWNDRGSGAAVDVSIWRPSSLESGFYPLGDVAVTLHEQPKSASILVRDSGNSLVRAPISVTEVWNDRGSGADRDVTVYRLNPLNGFTCLGHVAVASYSQTPSLNAYRCVNSSHVTQGRLSFVWNDRGSGATRDVSFWSVENDPMLTGITAGTFISHASHSDLGTVPAVLDANKAILSAFLPTSSEVALVLYNTDRVTEMWNDKGSGGKYDVSIWRAQGCCSLGDIAMPNYGQPKGILLRETIPGTLRKPLSFERIWTDRGSGADRDVSIWKPICPPSYHALGFVAEGSHGRVPSVETVRCVNTSHVLRGDWQWVYDDTKTGSSQDVTIWKAVGSGQTANTFKAVTRHGAMDTPSFILNPRFVSVQTGAPVAKVRLVNFIYDFESQVVSNVDPLELTTRTIAENCRAPPGSPPLNVKRKIDVTVTMTSSWSVSTSLAVGVEVTFEAGIPLIAKNQVKVSTTLTRQWEKTITESKSVTDSLEATIDVQAGKSVSYVVTGRRYIGSIPWKATMMTTFEDGSSNIDQVGGIFEGMQVSEIRVSADAPLPCG
SIO_010081: LOC116957357
subclass of: SO_0000673
so part of: LOC116957357
location: complement(join(210298..211331,212428..212598,213431..213549,215212..215349,217787..217898,218146..218256,221158..221227))
location: region:210298-221227:-1
so has part: feature:221158-221227:-1:exon
so has part: feature:218146-218256:-1:exon
so has part: feature:217787-217898:-1:exon
so has part: feature:215212-215349:-1:exon
so has part: feature:213431-213549:-1:exon
so has part: feature:212428-212598:-1:exon
so has part: feature:210298-211331:-1:exon

XP_032835356.1
type: Protein
SIO_000068: ncbiprotein

position:221227:-1
position: 221227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221158-221227:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218146-218256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217787-217898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215212-215349:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:213431-213549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:212428-212598:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:210298-211331:-1:exon

LOC116957357
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957357
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957357 isoform X2
translation: MHHVTLCGLLLLVTSWPCVFATIVNKVVYKFSTEYEAIWNDRGSGAAVDVSIWRPSSLESGFYPLGDVAVTLHEQPKSASILVRDSGNSLVRAPISVTEVWNDRGSGADRDVTVYRLNPLNGFTCLGHVAVASYSQTPSLNAYRCVNSSHVTQGRLSFVWNDRGSGATRDVSFWSVENDPMLTGITAGTFISHASHSDLGTVPAVLDANKAILSAFLPTSSEVALVLYNTDRVTEMWNDKGSGGKYDVSIWRAQGCCSLGDIAMPNYGQPKGILLRETIPGTLRKPLSFERIWTDRGSGADRDVSIWKPICPPSYHALGFVAEGSHGRVPSVETVRCVNTSHVLRGDWQWVYDDTKTGSSQDVTIWKAVGSGQTANTFKAVTRHGAMDTPSFILNPRFVSVQTGAPVAKVRLVNFIYDFESQVVSNVDPLELTTRTIAENCRAPPGSPPLNVKRKIDVTVTMTSSWSVSTSLAVGVEVTFEAGIPLIAKNQVKVSTTLTRQWEKTITESKSVTDSLEATIDVQAGKSVSYVVTGRRYIGSIPWKATMMTTFEDGSSNIDQVGGIFEGMQVSEIRVSADAPLPCG
SIO_010081: LOC116957357
subclass of: SO_0000673
so part of: LOC116957357
location: complement(join(210298..211331,212428..212598,213431..213549,215212..215349,217787..217898,218146..218256,221158..221227))
location: region:210298-221227:-1
so has part: feature:221158-221227:-1:exon
so has part: feature:218146-218256:-1:exon
so has part: feature:217787-217898:-1:exon
so has part: feature:215212-215349:-1:exon
so has part: feature:213431-213549:-1:exon
so has part: feature:212428-212598:-1:exon
so has part: feature:210298-211331:-1:exon

XP_032835357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221158-221227:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218146-218256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217787-217898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215212-215349:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:213431-213549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:212428-212598:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:210298-211331:-1:exon

PSMC6
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: PSMC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(245528..270102)
location: region:245528-270102:-1
so has part: feature:245528-270102:-1:exon
subclass of: SO_0000010

116957353
type: Gene
SIO_000068: ncbigene

position:245528:-1
position: 245528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270102:-1
position: 270102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245528-270102:-1:exon

PSMC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: PSMC6
product: proteasome 26S subunit, ATPase 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_032979461.1
SIO_010081: PSMC6
subclass of: SO_0000673
so part of: PSMC6
location: complement(join(245528..245784,247904..247975,248494..248574,252356..252476,255965..256026,258442..258565,259444..259505,259879..259966,260913..261027,262042..262109,263420..263472,267422..267461,268347..268426,269948..270102))
location: region:245528-270102:-1
so has part: feature:269948-270102:-1:exon
so has part: feature:268347-268426:-1:exon
so has part: feature:267422-267461:-1:exon
so has part: feature:263420-263472:-1:exon
so has part: feature:262042-262109:-1:exon
so has part: feature:260913-261027:-1:exon
so has part: feature:259879-259966:-1:exon
so has part: feature:259444-259505:-1:exon
so has part: feature:258442-258565:-1:exon
so has part: feature:255965-256026:-1:exon
so has part: feature:252356-252476:-1:exon
so has part: feature:248494-248574:-1:exon
so has part: feature:247904-247975:-1:exon
so has part: feature:245528-245784:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:269948-270102:-1:exon

position:269948:-1
position: 269948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:268347-268426:-1:exon

position:268347:-1
position: 268347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268426:-1
position: 268426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:267422-267461:-1:exon

position:267422:-1
position: 267422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267461:-1
position: 267461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:263420-263472:-1:exon

position:263420:-1
position: 263420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263472:-1
position: 263472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:262042-262109:-1:exon

position:262042:-1
position: 262042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262109:-1
position: 262109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:260913-261027:-1:exon

position:260913:-1
position: 260913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261027:-1
position: 261027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:259879-259966:-1:exon

position:259879:-1
position: 259879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259966:-1
position: 259966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:259444-259505:-1:exon

position:259444:-1
position: 259444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259505:-1
position: 259505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:258442-258565:-1:exon

position:258442:-1
position: 258442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258565:-1
position: 258565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:255965-256026:-1:exon

position:255965:-1
position: 255965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256026:-1
position: 256026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:252356-252476:-1:exon

position:252356:-1
position: 252356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252476:-1
position: 252476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:248494-248574:-1:exon

position:248494:-1
position: 248494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248574:-1
position: 248574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:247904-247975:-1:exon

position:247904:-1
position: 247904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247975:-1
position: 247975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:245528-245784:-1:exon

position:245784:-1
position: 245784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: PSMC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome regulatory subunit 10B
translation: MSVQGAAMAERDAALHEHRKKLLEHKEVDGRLRELREQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEDKFIVKATNGPRYVVGCRRQLDKSKLKAGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGQVSYSEIGGLTEQIRELREVIELPLLNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARLIREMFNFARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLGKVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQGRLDIMKIHAAPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRAEREFVMQEDFMKAVRKVAESKKLESKLDYKPI
SIO_010081: PSMC6
subclass of: SO_0000673
so part of: PSMC6
location: complement(join(245666..245784,247904..247975,248494..248574,252356..252476,255965..256026,258442..258565,259444..259505,259879..259966,260913..261027,262042..262109,263420..263472,267422..267461,268347..268426,269948..270050))
location: region:245666-270050:-1
so has part: feature:269948-270050:-1:exon
so has part: feature:268347-268426:-1:exon
so has part: feature:267422-267461:-1:exon
so has part: feature:263420-263472:-1:exon
so has part: feature:262042-262109:-1:exon
so has part: feature:260913-261027:-1:exon
so has part: feature:259879-259966:-1:exon
so has part: feature:259444-259505:-1:exon
so has part: feature:258442-258565:-1:exon
so has part: feature:255965-256026:-1:exon
so has part: feature:252356-252476:-1:exon
so has part: feature:248494-248574:-1:exon
so has part: feature:247904-247975:-1:exon
so has part: feature:245666-245784:-1:exon

XP_032835352.1
type: Protein
SIO_000068: ncbiprotein

position:245666:-1
position: 245666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270050:-1
position: 270050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269948-270050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268347-268426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:267422-267461:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:263420-263472:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262042-262109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:260913-261027:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:259879-259966:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259444-259505:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:258442-258565:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:255965-256026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:252356-252476:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:248494-248574:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:247904-247975:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:245666-245784:-1:exon

LOC116957376
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957376
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 313719..361034
location: region:313719-361034:1
so has part: feature:313719-361034:1:exon
subclass of: SO_0000010

116957376
type: Gene
SIO_000068: ncbigene

position:313719:1
position: 313719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361034:1
position: 361034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313719-361034:1:exon

LOC116957376
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957376
product: uncharacterized LOC116957376
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032979493.1
SIO_010081: LOC116957376
subclass of: SO_0000673
so part of: LOC116957376
location: join(313719..314072,318088..318825,321115..321301,322711..322875,323277..324001,329074..329256,331246..331279,333359..333538,334310..334695,335600..335760,336549..336665,337954..338079,340329..340421,341327..344234,350574..350646,351821..351870,352044..352318,357156..357224,359510..359660,360681..361034)
location: region:313719-361034:1
so has part: feature:313719-314072:1:exon
so has part: feature:318088-318825:1:exon
so has part: feature:321115-321301:1:exon
so has part: feature:322711-322875:1:exon
so has part: feature:323277-324001:1:exon
so has part: feature:329074-329256:1:exon
so has part: feature:331246-331279:1:exon
so has part: feature:333359-333538:1:exon
so has part: feature:334310-334695:1:exon
so has part: feature:335600-335760:1:exon
so has part: feature:336549-336665:1:exon
so has part: feature:337954-338079:1:exon
so has part: feature:340329-340421:1:exon
so has part: feature:341327-344234:1:exon
so has part: feature:350574-350646:1:exon
so has part: feature:351821-351870:1:exon
so has part: feature:352044-352318:1:exon
so has part: feature:357156-357224:1:exon
so has part: feature:359510-359660:1:exon
so has part: feature:360681-361034:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:313719-314072:1:exon

position:314072:1
position: 314072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:318088-318825:1:exon

position:318088:1
position: 318088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318825:1
position: 318825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:321115-321301:1:exon

position:321115:1
position: 321115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321301:1
position: 321301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:322711-322875:1:exon

position:322711:1
position: 322711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322875:1
position: 322875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:323277-324001:1:exon

position:323277:1
position: 323277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324001:1
position: 324001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:329074-329256:1:exon

position:329074:1
position: 329074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329256:1
position: 329256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:331246-331279:1:exon

position:331246:1
position: 331246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331279:1
position: 331279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:333359-333538:1:exon

position:333359:1
position: 333359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333538:1
position: 333538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:334310-334695:1:exon

position:334310:1
position: 334310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334695:1
position: 334695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:335600-335760:1:exon

position:335600:1
position: 335600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335760:1
position: 335760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:336549-336665:1:exon

position:336549:1
position: 336549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336665:1
position: 336665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:337954-338079:1:exon

position:337954:1
position: 337954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338079:1
position: 338079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:340329-340421:1:exon

position:340329:1
position: 340329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340421:1
position: 340421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:341327-344234:1:exon

position:341327:1
position: 341327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344234:1
position: 344234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:350574-350646:1:exon

position:350574:1
position: 350574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350646:1
position: 350646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:351821-351870:1:exon

position:351821:1
position: 351821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351870:1
position: 351870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:352044-352318:1:exon

position:352044:1
position: 352044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352318:1
position: 352318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:357156-357224:1:exon

position:357156:1
position: 357156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357224:1
position: 357224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:359510-359660:1:exon

position:359510:1
position: 359510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359660:1
position: 359660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:360681-361034:1:exon

position:360681:1
position: 360681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957376
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957376
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957376
translation: MEEKMEEKMEEEEKQEERGKAEVVAEALRGDVEGGEGAQSCEGGEGQQQQEVVMSVEVAAVATSREEEDRQQQDDEEAEAMALMMEAEALGVEEVVEITYEGPGVTYSQLDMNRYWAECPFCLKNSDGHTYCSHCGAQLPANTVKRLKPAPQQHQQQHQQHHHHQQQQHHHHTAFGFHGGRPLSLSRPSPRQGHAHPSGHASPSFGPRGPFRSSTGGRLPALRTPAQQPQQRAAASQLLLHHSLMQQQRGGPRGGGVGGSAACSAASPRAIPHYDRHHQQQQQQLRNYHHHQHHQHHQQQQHSLLRAGRGAALVGAGRARGGAGGGAALMAAAGGRGGRGVGQLPLGGGHQRGAQGSFSSCWPPNGAMKPPGFVGGSPHPHHAFSSLRLQCNGGRLGPPLHGRPLPLTPIHSKPDEPIVLSSGDEDDDEVENKEGNHGKKPAGKEGEEQKEEEQKEEGQKEEGQKEEGQKEEEEEQQQTTEDKTQEVEEEEEETAVVRVKESGEENGEEEAAAAKHDEVSEEEAAVSAPPRCDEAEEGEAGGEGEEEVEGEGTVSAAAATQGRQEILGDDDDDELQQQLLLLQQHDDDDDEEDEEEDFDEEELDDEEEEECAVCGEEGCEECGAGEEEEELEDEEEEDEEICNDCEEGECARHAEEEMDEEDEEEFDDEDEEEEEEEEEEEEEEEPEEEEEGAILALDEGSGGGESDTEGGKRKAAASLLRCRQAKRARGVVHPHLLPAVSPWRQRALSPRRRVLLDCAAVYVGGEEHRPAGPVTVSVISVDIPIAVGEGRAPRVLSLPARSLCSCSVNTAEPQGPSLLLALEPSLALSVHSQLLSWAGLDSVEATEPPERVVTLVVEAPLPPASLRLLQELLLEVARRNGGPPPPHHNFSSSSRVPGGLAPHSPLAPHPTSAHGALTLAPAHQHHQHHHHQHHHHQHHHQHHQHAVAAYVAAGFAEPPYGPGGGRPPHGFQHGVGVPWPADFSVLQLRQGGHYASELMPASSSSSPAPPFAVPADSSQRSSSNIPVQRLIIYPPPPTKGGLSVTTEDLLCLEPGEFLNDIIIDFYLKFLVSSERMSREDSDGIHVFSTFFYKRLLQTERVLTEHMASLTLAQRRHARVRTWTRRVDLFKKNFIFIPINEEHHWFLAVVCFPGLESPTFEPNPNHHEPSPSHGEESPGCGEQSLSHGEQSLSHGEQSPSHGDQSPERGEESPKRGEQSPKPGEQSPKRGEQSPKRGEQSPKRGLQSPKRGEQSPKPGEQSPKRGEQSPKRGLQSPKRGEQSPSLGEQSPRCGEQSPRCGEQSPSLGEQSPKRGEQSPSLGEQSPKRGEQSPRCGEQSPKRGEQSPSLGEQSPKRGEQSPSLGEQSPKRGEQSPSLGEQSPKRGEQSPKRGEQSPKRGEQSPSLGEQSPKRGEQSPSLGKQSPKRGEQSPSLGEQSPRRGEQSPKCGEQSPKRGEQSPKSGEQSPKSREQSPRRGEHSPKRGEQSPKSREQSPKSREQSPKSREQSPKSREQSPKSREQSPKSREQSPKSREESPKRGGQSPKSREQSPKSREQSPRHGEQSPVTPHSTRNGNGGGTHNGCGSTKGADTCSAGDTDGAGAAGVAYGADGCGYSGSIDGGADGTAVKNRSSDGVDGGGGGNVGAYPSACPSQTYPCDAHSPQPLHQLCQPSSDSPHDAAATVAGTVTCNLGEGQRDNVREREGDGGEEGTSSRESERDRATEGDSGVDEGGSGEIEGGTVEKKDESGEEEESGEKEEESVEKEEGCVEEGGSVEGGESREKEGGSGDRERDTGYWMEDIGEREGGHVQEKGSSGRRDGESGEEEGSDASGQGIIILETRSLCTEEGMITEDKGEVERGKEEEGMEEVKEPDEKDVEMEEVKRHEGKMEEVKGAEEVMEKTMKEQSLEAMEGVEEDGANEVEESAIVITEIRSVANEFDQRGGGEDEEMQDKEVELRASVVGIGRADELEEEQQRGEGCRDQGEWVRQTGYGDRVKENEEVAQ…
SIO_010081: LOC116957376
subclass of: SO_0000673
so part of: LOC116957376
location: join(313746..314072,318088..318825,321115..321301,322711..322875,323277..324001,329074..329256,331246..331279,333359..333538,334310..334695,335600..335760,336549..336665,337954..338079,340329..340421,341327..344234,350574..350646,351821..351870,352044..352318,357156..357224,359510..359660,360681..360824)
location: region:313746-360824:1
so has part: feature:313746-314072:1:exon
so has part: feature:318088-318825:1:exon
so has part: feature:321115-321301:1:exon
so has part: feature:322711-322875:1:exon
so has part: feature:323277-324001:1:exon
so has part: feature:329074-329256:1:exon
so has part: feature:331246-331279:1:exon
so has part: feature:333359-333538:1:exon
so has part: feature:334310-334695:1:exon
so has part: feature:335600-335760:1:exon
so has part: feature:336549-336665:1:exon
so has part: feature:337954-338079:1:exon
so has part: feature:340329-340421:1:exon
so has part: feature:341327-344234:1:exon
so has part: feature:350574-350646:1:exon
so has part: feature:351821-351870:1:exon
so has part: feature:352044-352318:1:exon
so has part: feature:357156-357224:1:exon
so has part: feature:359510-359660:1:exon
so has part: feature:360681-360824:1:exon

XP_032835384.1
type: Protein
SIO_000068: ncbiprotein

position:313746:1
position: 313746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360824:1
position: 360824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313746-314072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:318088-318825:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321115-321301:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322711-322875:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323277-324001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:329074-329256:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331246-331279:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:333359-333538:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:334310-334695:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:335600-335760:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:336549-336665:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:337954-338079:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:340329-340421:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:341327-344234:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:350574-350646:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:351821-351870:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:352044-352318:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:357156-357224:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:359510-359660:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:360681-360824:1:exon

TATDN1
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TATDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(375644..400662)
location: region:375644-400662:-1
so has part: feature:375644-400662:-1:exon
subclass of: SO_0000010

116957374
type: Gene
SIO_000068: ncbigene

position:375644:-1
position: 375644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400662:-1
position: 400662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375644-400662:-1:exon

TATDN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TATDN1
product: TatD DNase domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032979491.1
SIO_010081: TATDN1
subclass of: SO_0000673
so part of: TATDN1
location: complement(join(375644..375866,380069..380195,380309..380379,380722..380798,384061..384101,384742..384827,385276..385318,388636..388711))
location: region:375644-388711:-1
so has part: feature:388636-388711:-1:exon
so has part: feature:385276-385318:-1:exon
so has part: feature:384742-384827:-1:exon
so has part: feature:384061-384101:-1:exon
so has part: feature:380722-380798:-1:exon
so has part: feature:380309-380379:-1:exon
so has part: feature:380069-380195:-1:exon
so has part: feature:375644-375866:-1:exon

position:388711:-1
position: 388711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388636-388711:-1:exon

position:388636:-1
position: 388636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:385276-385318:-1:exon

position:385276:-1
position: 385276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385318:-1
position: 385318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:384742-384827:-1:exon

position:384742:-1
position: 384742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384827:-1
position: 384827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:384061-384101:-1:exon

position:384061:-1
position: 384061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384101:-1
position: 384101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:380722-380798:-1:exon

position:380722:-1
position: 380722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380798:-1
position: 380798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:380309-380379:-1:exon

position:380309:-1
position: 380309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380379:-1
position: 380379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:380069-380195:-1:exon

position:380069:-1
position: 380069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380195:-1
position: 380195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:375644-375866:-1:exon

position:375866:-1
position: 375866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TATDN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TATDN1
product: TatD DNase domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_032979490.1
SIO_010081: TATDN1
subclass of: SO_0000673
so part of: TATDN1
location: complement(join(375645..375866,380069..380195,380309..380379,380722..380798,384061..384101,384742..384827,385276..385318,388608..388748,391421..391484,392393..392442,393876..393941,400542..400662))
location: region:375645-400662:-1
so has part: feature:400542-400662:-1:exon
so has part: feature:393876-393941:-1:exon
so has part: feature:392393-392442:-1:exon
so has part: feature:391421-391484:-1:exon
so has part: feature:388608-388748:-1:exon
so has part: feature:385276-385318:-1:exon
so has part: feature:384742-384827:-1:exon
so has part: feature:384061-384101:-1:exon
so has part: feature:380722-380798:-1:exon
so has part: feature:380309-380379:-1:exon
so has part: feature:380069-380195:-1:exon
so has part: feature:375645-375866:-1:exon

position:375645:-1
position: 375645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400542-400662:-1:exon

position:400542:-1
position: 400542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:393876-393941:-1:exon

position:393876:-1
position: 393876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393941:-1
position: 393941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:392393-392442:-1:exon

position:392393:-1
position: 392393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392442:-1
position: 392442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:391421-391484:-1:exon

position:391421:-1
position: 391421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391484:-1
position: 391484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:388608-388748:-1:exon

position:388608:-1
position: 388608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388748:-1
position: 388748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:385276-385318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:384742-384827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:384061-384101:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:380722-380798:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:380309-380379:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:380069-380195:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:375645-375866:-1:exon

TATDN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TATDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative deoxyribonuclease TATDN1 isoform X1
translation: MAAIRSAALRFVDIGVNLTDPMFRGIYKGQQKHKDDFDDVIRRAVDAGVEKFIITGGSLSDSEEALALAHTSDRFLCTVGCHPTRCAEFEAESETYGERLLALARSGAPKVTAVGECGLDYDRLQFCAKETQLKFFEKQFEVAEETRLPMFLHCRNSHSDFLDIVRRNRDRFTGGVVHSFDGSKEEAAAIVEQGLFIGINGCSLKTRENLDAIKSIPAERLLIETDAPWCSVRPLHAGFPFVSTHFPCSKKWEEGRALKGRHEPCFIVQVLEIIAAVRDEDPSELAATIYNNSTQLFRL
SIO_010081: TATDN1
subclass of: SO_0000673
so part of: TATDN1
location: complement(join(375770..375866,380069..380195,380309..380379,380722..380798,384061..384101,384742..384827,385276..385318,388608..388748,391421..391484,392393..392442,393876..393941,400542..400578))
location: region:375770-400578:-1
so has part: feature:400542-400578:-1:exon
so has part: feature:393876-393941:-1:exon
so has part: feature:392393-392442:-1:exon
so has part: feature:391421-391484:-1:exon
so has part: feature:388608-388748:-1:exon
so has part: feature:385276-385318:-1:exon
so has part: feature:384742-384827:-1:exon
so has part: feature:384061-384101:-1:exon
so has part: feature:380722-380798:-1:exon
so has part: feature:380309-380379:-1:exon
so has part: feature:380069-380195:-1:exon
so has part: feature:375770-375866:-1:exon

XP_032835381.1
type: Protein
SIO_000068: ncbiprotein

position:375770:-1
position: 375770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400578:-1
position: 400578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400542-400578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393876-393941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:392393-392442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391421-391484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388608-388748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:385276-385318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:384742-384827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:384061-384101:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:380722-380798:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:380309-380379:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:380069-380195:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:375770-375866:-1:exon

TATDN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TATDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative deoxyribonuclease TATDN1 isoform X2
translation: MFLHCRNSHSDFLDIVRRNRDRFTGGVVHSFDGSKEEAAAIVEQGLFIGINGCSLKTRENLDAIKSIPAERLLIETDAPWCSVRPLHAGFPFVSTHFPCSKKWEEGRALKGRHEPCFIVQVLEIIAAVRDEDPSELAATIYNNSTQLFRL
SIO_010081: TATDN1
subclass of: SO_0000673
so part of: TATDN1
location: complement(join(375770..375866,380069..380195,380309..380379,380722..380798,384061..384101,384742..384781))
location: region:375770-384781:-1
so has part: feature:384742-384781:-1:exon
so has part: feature:384061-384101:-1:exon
so has part: feature:380722-380798:-1:exon
so has part: feature:380309-380379:-1:exon
so has part: feature:380069-380195:-1:exon
so has part: feature:375770-375866:-1:exon

XP_032835382.1
type: Protein
SIO_000068: ncbiprotein

position:384781:-1
position: 384781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384742-384781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384061-384101:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:380722-380798:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:380309-380379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380069-380195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:375770-375866:-1:exon

LOC116957369
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 405959..433888
location: region:405959-433888:1
so has part: feature:405959-433888:1:exon
subclass of: SO_0000010

116957369
type: Gene
SIO_000068: ncbigene

position:405959:1
position: 405959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433888:1
position: 433888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405959-433888:1:exon

LOC116957369
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957369
product: uncharacterized LOC116957369, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032979481.1
SIO_010081: LOC116957369
subclass of: SO_0000673
so part of: LOC116957369
location: join(405959..406146,420364..420717,421770..421886,428285..428392,431625..431704,432484..433888)
location: region:405959-433888:1
so has part: feature:405959-406146:1:exon
so has part: feature:420364-420717:1:exon
so has part: feature:421770-421886:1:exon
so has part: feature:428285-428392:1:exon
so has part: feature:431625-431704:1:exon
so has part: feature:432484-433888:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405959-406146:1:exon

position:406146:1
position: 406146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:420364-420717:1:exon

position:420364:1
position: 420364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420717:1
position: 420717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:421770-421886:1:exon

position:421770:1
position: 421770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421886:1
position: 421886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:428285-428392:1:exon

position:428285:1
position: 428285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428392:1
position: 428392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:431625-431704:1:exon

position:431625:1
position: 431625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431704:1
position: 431704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:432484-433888:1:exon

position:432484:1
position: 432484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957369
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957369
product: uncharacterized LOC116957369, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032979483.1
SIO_010081: LOC116957369
subclass of: SO_0000673
so part of: LOC116957369
location: join(405959..406146,420364..420717,421770..421886,431625..431704,432484..433888)
location: region:405959-433888:1
so has part: feature:405959-406146:1:exon
so has part: feature:420364-420717:1:exon
so has part: feature:421770-421886:1:exon
so has part: feature:431625-431704:1:exon
so has part: feature:432484-433888:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405959-406146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420364-420717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421770-421886:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431625-431704:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:432484-433888:1:exon

LOC116957369
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957369
product: uncharacterized LOC116957369, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032979482.1
SIO_010081: LOC116957369
subclass of: SO_0000673
so part of: LOC116957369
location: join(405960..406146,420364..420717,421785..421886,428285..428392,431625..431704,432484..433888)
location: region:405960-433888:1
so has part: feature:405960-406146:1:exon
so has part: feature:420364-420717:1:exon
so has part: feature:421785-421886:1:exon
so has part: feature:428285-428392:1:exon
so has part: feature:431625-431704:1:exon
so has part: feature:432484-433888:1:exon

position:405960:1
position: 405960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405960-406146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420364-420717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421785-421886:1:exon

position:421785:1
position: 421785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:428285-428392:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431625-431704:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:432484-433888:1:exon

LOC116957369
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957369
product: uncharacterized LOC116957369, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032979485.1
SIO_010081: LOC116957369
subclass of: SO_0000673
so part of: LOC116957369
location: join(405960..406146,420364..420717,421785..421886,431625..431704,432484..433888)
location: region:405960-433888:1
so has part: feature:405960-406146:1:exon
so has part: feature:420364-420717:1:exon
so has part: feature:421785-421886:1:exon
so has part: feature:431625-431704:1:exon
so has part: feature:432484-433888:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405960-406146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420364-420717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421785-421886:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431625-431704:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:432484-433888:1:exon

LOC116957369
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957369
product: uncharacterized LOC116957369, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_032979484.1
SIO_010081: LOC116957369
subclass of: SO_0000673
so part of: LOC116957369
location: join(405960..406146,420364..420717,428285..428392,431625..431704,432484..433888)
location: region:405960-433888:1
so has part: feature:405960-406146:1:exon
so has part: feature:420364-420717:1:exon
so has part: feature:428285-428392:1:exon
so has part: feature:431625-431704:1:exon
so has part: feature:432484-433888:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405960-406146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420364-420717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428285-428392:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431625-431704:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:432484-433888:1:exon

LOC116957369
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957369
product: uncharacterized LOC116957369, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_032979487.1
SIO_010081: LOC116957369
subclass of: SO_0000673
so part of: LOC116957369
location: join(405960..406146,420364..420717,431625..431704,432484..433888)
location: region:405960-433888:1
so has part: feature:405960-406146:1:exon
so has part: feature:420364-420717:1:exon
so has part: feature:431625-431704:1:exon
so has part: feature:432484-433888:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405960-406146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420364-420717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:431625-431704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432484-433888:1:exon

LOC116957369
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957369 isoform X1
translation: MQQRAGLAMMAWMVLLALPWLTLAEQDCMLSIPLSPLHSTPRANVTLPCHARSPHCTLQMITWSRLISIEEAETIVTCNGSLCEVTASGYQGRVRLATSQSHNSSLILTDVRLNDTTRYNCVHQWRLGDVFQKSTIAVDLNVTELSRFPEGTTISTQVTEAGQEERKSDEGRGSRSKVGAVEPEQETNTAAHVPMWYYMPAVVLVVVMAVGLPLLYHFTCKKKSVAVLLYPSTSLDGRTEPRAMQNDAAGEVFYETVNMGDEEPRDSMAGEEPHIHGSPLPVIYSTVNEVSSGPNS
SIO_010081: LOC116957369
subclass of: SO_0000673
so part of: LOC116957369
location: join(406068..406146,420364..420717,421770..421886,428285..428392,431625..431704,432484..432636)
location: region:406068-432636:1
so has part: feature:406068-406146:1:exon
so has part: feature:420364-420717:1:exon
so has part: feature:421770-421886:1:exon
so has part: feature:428285-428392:1:exon
so has part: feature:431625-431704:1:exon
so has part: feature:432484-432636:1:exon

XP_032835372.1
type: Protein
SIO_000068: ncbiprotein

position:406068:1
position: 406068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432636:1
position: 432636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406068-406146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420364-420717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421770-421886:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:428285-428392:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431625-431704:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:432484-432636:1:exon

LOC116957369
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957369 isoform X3
translation: MQQRAGLAMMAWMVLLALPWLTLAEQDCMLSIPLSPLHSTPRANVTLPCHARSPHCTLQMITWSRLISIEEAETIVTCNGSLCEVTASGYQGRVRLATSQSHNSSLILTDVRLNDTTRYNCVHQWRLGDVFQKSTIAVDLNVTELSRFPEGTTISTQVTEAGQEERKSDEGRGSRSKVGAVEPGKKKSVAVLLYPSTSLDGRTEPRAMQNDAAGEVFYETVNMGDEEPRDSMAGEEPHIHGSPLPVIYSTVNEVSSGPNS
SIO_010081: LOC116957369
subclass of: SO_0000673
so part of: LOC116957369
location: join(406068..406146,420364..420717,421770..421886,431625..431704,432484..432636)
location: region:406068-432636:1
so has part: feature:406068-406146:1:exon
so has part: feature:420364-420717:1:exon
so has part: feature:421770-421886:1:exon
so has part: feature:431625-431704:1:exon
so has part: feature:432484-432636:1:exon

XP_032835374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406068-406146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420364-420717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421770-421886:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431625-431704:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:432484-432636:1:exon

LOC116957369
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957369 isoform X2
translation: MQQRAGLAMMAWMVLLALPWLTLAEQDCMLSIPLSPLHSTPRANVTLPCHARSPHCTLQMITWSRLISIEEAETIVTCNGSLCEVTASGYQGRVRLATSQSHNSSLILTDVRLNDTTRYNCVHQWRLGDVFQKSTIAVDLNVTEQGTTISTQVTEAGQEERKSDEGRGSRSKVGAVEPEQETNTAAHVPMWYYMPAVVLVVVMAVGLPLLYHFTCKKKSVAVLLYPSTSLDGRTEPRAMQNDAAGEVFYETVNMGDEEPRDSMAGEEPHIHGSPLPVIYSTVNEVSSGPNS
SIO_010081: LOC116957369
subclass of: SO_0000673
so part of: LOC116957369
location: join(406068..406146,420364..420717,421785..421886,428285..428392,431625..431704,432484..432636)
location: region:406068-432636:1
so has part: feature:406068-406146:1:exon
so has part: feature:420364-420717:1:exon
so has part: feature:421785-421886:1:exon
so has part: feature:428285-428392:1:exon
so has part: feature:431625-431704:1:exon
so has part: feature:432484-432636:1:exon

XP_032835373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406068-406146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420364-420717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421785-421886:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:428285-428392:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431625-431704:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:432484-432636:1:exon

LOC116957369
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957369 isoform X5
translation: MQQRAGLAMMAWMVLLALPWLTLAEQDCMLSIPLSPLHSTPRANVTLPCHARSPHCTLQMITWSRLISIEEAETIVTCNGSLCEVTASGYQGRVRLATSQSHNSSLILTDVRLNDTTRYNCVHQWRLGDVFQKSTIAVDLNVTEQGTTISTQVTEAGQEERKSDEGRGSRSKVGAVEPGKKKSVAVLLYPSTSLDGRTEPRAMQNDAAGEVFYETVNMGDEEPRDSMAGEEPHIHGSPLPVIYSTVNEVSSGPNS
SIO_010081: LOC116957369
subclass of: SO_0000673
so part of: LOC116957369
location: join(406068..406146,420364..420717,421785..421886,431625..431704,432484..432636)
location: region:406068-432636:1
so has part: feature:406068-406146:1:exon
so has part: feature:420364-420717:1:exon
so has part: feature:421785-421886:1:exon
so has part: feature:431625-431704:1:exon
so has part: feature:432484-432636:1:exon

XP_032835376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406068-406146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420364-420717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421785-421886:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431625-431704:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:432484-432636:1:exon

LOC116957369
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957369 isoform X4
translation: MQQRAGLAMMAWMVLLALPWLTLAEQDCMLSIPLSPLHSTPRANVTLPCHARSPHCTLQMITWSRLISIEEAETIVTCNGSLCEVTASGYQGRVRLATSQSHNSSLILTDVRLNDTTRYNCVHQWRLGDVFQKSTIAVDLNVTEQQETNTAAHVPMWYYMPAVVLVVVMAVGLPLLYHFTCKKKSVAVLLYPSTSLDGRTEPRAMQNDAAGEVFYETVNMGDEEPRDSMAGEEPHIHGSPLPVIYSTVNEVSSGPNS
SIO_010081: LOC116957369
subclass of: SO_0000673
so part of: LOC116957369
location: join(406068..406146,420364..420717,428285..428392,431625..431704,432484..432636)
location: region:406068-432636:1
so has part: feature:406068-406146:1:exon
so has part: feature:420364-420717:1:exon
so has part: feature:428285-428392:1:exon
so has part: feature:431625-431704:1:exon
so has part: feature:432484-432636:1:exon

XP_032835375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406068-406146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420364-420717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428285-428392:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431625-431704:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:432484-432636:1:exon

LOC116957369
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957369 isoform X6
translation: MQQRAGLAMMAWMVLLALPWLTLAEQDCMLSIPLSPLHSTPRANVTLPCHARSPHCTLQMITWSRLISIEEAETIVTCNGSLCEVTASGYQGRVRLATSQSHNSSLILTDVRLNDTTRYNCVHQWRLGDVFQKSTIAVDLNVTERKKKSVAVLLYPSTSLDGRTEPRAMQNDAAGEVFYETVNMGDEEPRDSMAGEEPHIHGSPLPVIYSTVNEVSSGPNS
SIO_010081: LOC116957369
subclass of: SO_0000673
so part of: LOC116957369
location: join(406068..406146,420364..420717,431625..431704,432484..432636)
location: region:406068-432636:1
so has part: feature:406068-406146:1:exon
so has part: feature:420364-420717:1:exon
so has part: feature:431625-431704:1:exon
so has part: feature:432484-432636:1:exon

XP_032835378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406068-406146:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420364-420717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:431625-431704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432484-432636:1:exon

LOC116957393
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957393
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 515984..518516
location: region:515984-518516:1
so has part: feature:515984-518516:1:exon
subclass of: SO_0000010

116957393
type: Gene
SIO_000068: ncbigene

position:515984:1
position: 515984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518516:1
position: 518516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515984-518516:1:exon

LOC116957393
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957393
product: hyaluronan and proteoglycan link protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032979511.1
SIO_010081: LOC116957393
subclass of: SO_0000673
so part of: LOC116957393
location: join(515984..516551,517983..518516)
location: region:515984-518516:1
so has part: feature:515984-516551:1:exon
so has part: feature:517983-518516:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:515984-516551:1:exon

position:516551:1
position: 516551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:517983-518516:1:exon

position:517983:1
position: 517983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957393
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957393
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 1-like
translation: MWTKASYIDRAKWTSYKVQIASFNSSTHVHSHYRGRAWIYGDNSSNFSLSIEALTADDAGYYKVTAVWDSDDGELRSESQQFLAVHEGCEVYTPRDSLRCTPGETVTLPCQAYSPLCALDTITWFKVTSEKLPIVRSMKTRNNHTEAGYKGRVHLAALGAHDASLILTDVTLNDSVIYECQHRWGHENKIHSSKATVTLAVQHELMPKPRGKDDS
SIO_010081: LOC116957393
subclass of: SO_0000673
so part of: LOC116957393
location: join(516290..516551,517983..518368)
location: region:516290-518368:1
so has part: feature:516290-516551:1:exon
so has part: feature:517983-518368:1:exon

XP_032835402.1
type: Protein
SIO_000068: ncbiprotein

position:516290:1
position: 516290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518368:1
position: 518368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516290-516551:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517983-518368:1:exon

LOC116957395
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957395
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 527466..531990
location: region:527466-531990:1
so has part: feature:527466-531990:1:exon
subclass of: SO_0000011

116957395
type: Gene
SIO_000068: ncbigene

position:527466:1
position: 527466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531990:1
position: 531990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527466-531990:1:exon

LOC116957395
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957395
product: uncharacterized LOC116957395
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004405166.1
SIO_010081: LOC116957395
subclass of: SO_0000673
so part of: LOC116957395
location: join(527466..527636,528214..528294,530423..530490,531583..531990)
location: region:527466-531990:1
so has part: feature:527466-527636:1:exon
so has part: feature:528214-528294:1:exon
so has part: feature:530423-530490:1:exon
so has part: feature:531583-531990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527466-527636:1:exon

position:527636:1
position: 527636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:528214-528294:1:exon

position:528214:1
position: 528214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528294:1
position: 528294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:530423-530490:1:exon

position:530423:1
position: 530423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530490:1
position: 530490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:531583-531990:1:exon

position:531583:1
position: 531583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957394
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957394
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 565517..571748
location: region:565517-571748:1
so has part: feature:565517-571748:1:exon
subclass of: SO_0000011

116957394
type: Gene
SIO_000068: ncbigene

position:565517:1
position: 565517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571748:1
position: 571748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565517-571748:1:exon

LOC116957394
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957394
product: uncharacterized LOC116957394
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004405165.1
SIO_010081: LOC116957394
subclass of: SO_0000673
so part of: LOC116957394
location: join(565517..565582,567684..567730,571239..571748)
location: region:565517-571748:1
so has part: feature:565517-565582:1:exon
so has part: feature:567684-567730:1:exon
so has part: feature:571239-571748:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565517-565582:1:exon

position:565582:1
position: 565582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:567684-567730:1:exon

position:567684:1
position: 567684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567730:1
position: 567730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:571239-571748:1:exon

position:571239:1
position: 571239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957387
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957387
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(745514..809787)
location: region:745514-809787:-1
so has part: feature:745514-809787:-1:exon
subclass of: SO_0000010

116957387
type: Gene
SIO_000068: ncbigene

position:745514:-1
position: 745514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809787:-1
position: 809787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745514-809787:-1:exon

LOC116957387
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957387
product: adhesion G protein-coupled receptor F4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032979508.1
SIO_010081: LOC116957387
subclass of: SO_0000673
so part of: LOC116957387
location: complement(join(745514..746399,747290..747344,747875..747922,750493..750534,752849..753775,760776..760995,763567..763762,764143..764302,767160..767345,770267..770322,778784..778920,779902..779963,780999..781108,784149..784430,796466..796561,809674..809787))
location: region:745514-809787:-1
so has part: feature:809674-809787:-1:exon
so has part: feature:796466-796561:-1:exon
so has part: feature:784149-784430:-1:exon
so has part: feature:780999-781108:-1:exon
so has part: feature:779902-779963:-1:exon
so has part: feature:778784-778920:-1:exon
so has part: feature:770267-770322:-1:exon
so has part: feature:767160-767345:-1:exon
so has part: feature:764143-764302:-1:exon
so has part: feature:763567-763762:-1:exon
so has part: feature:760776-760995:-1:exon
so has part: feature:752849-753775:-1:exon
so has part: feature:750493-750534:-1:exon
so has part: feature:747875-747922:-1:exon
so has part: feature:747290-747344:-1:exon
so has part: feature:745514-746399:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:809674-809787:-1:exon

position:809674:-1
position: 809674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:796466-796561:-1:exon

position:796466:-1
position: 796466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796561:-1
position: 796561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:784149-784430:-1:exon

position:784149:-1
position: 784149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784430:-1
position: 784430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:780999-781108:-1:exon

position:780999:-1
position: 780999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781108:-1
position: 781108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:779902-779963:-1:exon

position:779902:-1
position: 779902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779963:-1
position: 779963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:778784-778920:-1:exon

position:778784:-1
position: 778784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778920:-1
position: 778920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:770267-770322:-1:exon

position:770267:-1
position: 770267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770322:-1
position: 770322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:767160-767345:-1:exon

position:767160:-1
position: 767160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767345:-1
position: 767345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:764143-764302:-1:exon

position:764143:-1
position: 764143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764302:-1
position: 764302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:763567-763762:-1:exon

position:763567:-1
position: 763567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763762:-1
position: 763762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:760776-760995:-1:exon

position:760776:-1
position: 760776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760995:-1
position: 760995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:752849-753775:-1:exon

position:752849:-1
position: 752849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753775:-1
position: 753775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:750493-750534:-1:exon

position:750493:-1
position: 750493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750534:-1
position: 750534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:747875-747922:-1:exon

position:747875:-1
position: 747875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747922:-1
position: 747922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:747290-747344:-1:exon

position:747290:-1
position: 747290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747344:-1
position: 747344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:745514-746399:-1:exon

position:746399:-1
position: 746399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957387
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957387
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G protein-coupled receptor F4-like
translation: MGDRAGIVVAAWLQLLLALPMLTPAQQVTVSSRKEALNANGNCMSKILYNINGTSNMNYWCVTMPQMCCYCRAGFFWTKAVCRQVGACDSWTDASSSSCTCIFGIPPAEIECMPKRNPRPLWTTANLTDTTWVMNKAITTVRSTQASSSLNLQDLKTFHMTLTVEEVFNSALNDPNSMAHKSMSDKLLPSLSRSYQNIGSRFVKAAITNFESGSVLAFVEVSGYNLTATEVITMTSVAIDALIASAIRVSRSFNVNGTATDGTTERLKYIFNQSKELQNESKETVQKAVPILLWELTAQTSSAQLTPYRVHAASAALGQIALAAKDKRITFQHQVAADFLETSSNLLNRSNAHLWRTLQERNKSNSADLLKSIEIFMSRINTTSGLGMATRGNDEWTFNITSANILLEGTVYGNSTQGAYSKTFLNAADATSVTIDSQQLSNVVNGDLYIVNILFTTLAGILPLRLAPELSDGSGANGVNYAVGSYVLSTIVNCAKSGACVTDIRFHFPVTEPKVAQSNNFKCTFWDTQFNNGRGGWSDFGCQLTSSPPAPTIGAGGTPLVDGRFVSCRCNHTTSFSILVSRDTIDDPTLSAISGAGIAVSIASLLAALAVEAATWRSAGRHKNSRVRHLVLVNLCCSLLFANVWFVAAASPAAISNPALCATIAFLVHLGYLSLFFWMLCEGLFLLYLVVIIYDRMTERQIWALAFALGYGLPAAIAVITIVVTHPRGAYLRGGACWLDWKRSRALLAFVVPAFVICCVNLAVLAMVVKKVACRSGAAMGAAMSGKPAVRVKQVVRSVAVLTPLLGVTWGLGIFAFSAGGRGSLALHYLFAILNSLQGLFILLFDCLFDKEIQKELRKKLGLCKDEPVISSSGLVGIGVVQQQSHSTDSTDQEMKRVAWKQPSTKCSVKVTDFSSSD
SIO_010081: LOC116957387
subclass of: SO_0000673
so part of: LOC116957387
location: complement(join(746302..746399,747290..747344,747875..747922,750493..750534,752849..753775,760776..760995,763567..763762,764143..764302,767160..767345,770267..770322,778784..778920,779902..779963,780999..781108,784149..784430,796466..796561,809674..809755))
location: region:746302-809755:-1
so has part: feature:809674-809755:-1:exon
so has part: feature:796466-796561:-1:exon
so has part: feature:784149-784430:-1:exon
so has part: feature:780999-781108:-1:exon
so has part: feature:779902-779963:-1:exon
so has part: feature:778784-778920:-1:exon
so has part: feature:770267-770322:-1:exon
so has part: feature:767160-767345:-1:exon
so has part: feature:764143-764302:-1:exon
so has part: feature:763567-763762:-1:exon
so has part: feature:760776-760995:-1:exon
so has part: feature:752849-753775:-1:exon
so has part: feature:750493-750534:-1:exon
so has part: feature:747875-747922:-1:exon
so has part: feature:747290-747344:-1:exon
so has part: feature:746302-746399:-1:exon

XP_032835399.1
type: Protein
SIO_000068: ncbiprotein

position:746302:-1
position: 746302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809755:-1
position: 809755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809674-809755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:796466-796561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:784149-784430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:780999-781108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:779902-779963:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:778784-778920:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:770267-770322:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:767160-767345:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:764143-764302:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:763567-763762:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:760776-760995:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:752849-753775:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:750493-750534:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:747875-747922:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:747290-747344:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:746302-746399:-1:exon

LOC116957388
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 828285..857423
location: region:828285-857423:1
so has part: feature:828285-857423:1:exon
subclass of: SO_0000010

116957388
type: Gene
SIO_000068: ncbigene

position:828285:1
position: 828285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857423:1
position: 857423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:828285-857423:1:exon

LOC116957388
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957388
product: uncharacterized LOC116957388
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032979509.1
SIO_010081: LOC116957388
subclass of: SO_0000673
so part of: LOC116957388
location: join(828285..828387,845536..845910,846886..847257,849407..849769,851897..851980,854290..854385,855908..855936,857112..857423)
location: region:828285-857423:1
so has part: feature:828285-828387:1:exon
so has part: feature:845536-845910:1:exon
so has part: feature:846886-847257:1:exon
so has part: feature:849407-849769:1:exon
so has part: feature:851897-851980:1:exon
so has part: feature:854290-854385:1:exon
so has part: feature:855908-855936:1:exon
so has part: feature:857112-857423:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:828285-828387:1:exon

position:828387:1
position: 828387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:845536-845910:1:exon

position:845536:1
position: 845536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845910:1
position: 845910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:846886-847257:1:exon

position:846886:1
position: 846886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847257:1
position: 847257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:849407-849769:1:exon

position:849407:1
position: 849407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849769:1
position: 849769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:851897-851980:1:exon

position:851897:1
position: 851897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851980:1
position: 851980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:854290-854385:1:exon

position:854290:1
position: 854290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854385:1
position: 854385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:855908-855936:1:exon

position:855908:1
position: 855908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855936:1
position: 855936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:857112-857423:1:exon

position:857112:1
position: 857112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957388
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957388
translation: MSPAAMAAWPLLLLVLPLLTPAQQDCSVSLPAETIQKTPQGSVLFSAATTTPPRCQLALESTAWTVSPKADRGAHGWHGVRVASFNGSAIVEPEYLGKAWTYSEGTSNASLLVKNLTIYDSGYYTVTAVWRSPSGIRQSESTQPLSVRSDCRISMPRKPIQTEVGGSVLFSAQITAAPRCRLASVVWVKARYNDKDTTSAEAPLQVAAFNGSARVHPRYRGRAWLYGGNSSKSWLSVKSLTRYDSGFYLVTATWGSDEGEVQSESRQLLSVHYACEVRTQHASLRSARHETATLLCRARSPLCALEVVAWFRIISMQDRELILLHNGSDLSRLGPNYVGRAAGVRLLWSRPDDASLVLANVSLGDAGKYECQHEWRQGGGFEFSVADIMLTVTKDKITEVATSPTTKTTTTTTEQDVPLRSAENGAHGYIAPAVSGVTILVLVLAVSLLAFYFKRAQRTRIENALRRQQQNTYDKLELSQVRTWRFSPVALPQHQVGSTEDLRTIVGT
SIO_010081: LOC116957388
subclass of: SO_0000673
so part of: LOC116957388
location: join(828315..828387,845536..845910,846886..847257,849407..849769,851897..851980,854290..854385,855908..855936,857112..857246)
location: region:828315-857246:1
so has part: feature:828315-828387:1:exon
so has part: feature:845536-845910:1:exon
so has part: feature:846886-847257:1:exon
so has part: feature:849407-849769:1:exon
so has part: feature:851897-851980:1:exon
so has part: feature:854290-854385:1:exon
so has part: feature:855908-855936:1:exon
so has part: feature:857112-857246:1:exon

XP_032835400.1
type: Protein
SIO_000068: ncbiprotein

position:828315:1
position: 828315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857246:1
position: 857246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:828315-828387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845536-845910:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:846886-847257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:849407-849769:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851897-851980:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:854290-854385:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:855908-855936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:857112-857246:1:exon

LOC116957389
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957389
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(841074..841719)
location: region:841074-841719:-1
so has part: feature:841074-841719:-1:exon
subclass of: SO_0000011

116957389
type: Gene
SIO_000068: ncbigene

position:841074:-1
position: 841074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841719:-1
position: 841719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:841074-841719:-1:exon

LOC116957389
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957389
product: uncharacterized LOC116957389
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_004405163.1
SIO_010081: LOC116957389
subclass of: SO_0000673
so part of: LOC116957389
location: complement(join(841074..841276,841318..841719))
location: region:841074-841719:-1
so has part: feature:841318-841719:-1:exon
so has part: feature:841074-841276:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:841318-841719:-1:exon

position:841318:-1
position: 841318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:841074-841276:-1:exon

position:841276:-1
position: 841276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957391
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957391
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 946268..960247
location: region:946268-960247:1
so has part: feature:946268-960247:1:exon
subclass of: SO_0000011

116957391
type: Gene
SIO_000068: ncbigene

position:946268:1
position: 946268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960247:1
position: 960247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946268-960247:1:exon

LOC116957391
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957391
product: uncharacterized LOC116957391
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004405164.1
SIO_010081: LOC116957391
subclass of: SO_0000673
so part of: LOC116957391
location: join(946268..946592,953940..954050,960056..960247)
location: region:946268-960247:1
so has part: feature:946268-946592:1:exon
so has part: feature:953940-954050:1:exon
so has part: feature:960056-960247:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:946268-946592:1:exon

position:946592:1
position: 946592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:953940-954050:1:exon

position:953940:1
position: 953940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954050:1
position: 954050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:960056-960247:1:exon

position:960056:1
position: 960056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TAF13
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TAF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(994906..1013072)
location: region:994906-1013072:-1
so has part: feature:994906-1013072:-1:exon
subclass of: SO_0000010

116957368
type: Gene
SIO_000068: ncbigene

position:994906:-1
position: 994906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013072:-1
position: 1013072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:994906-1013072:-1:exon

TAF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TAF13
product: TATA-box binding protein associated factor 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_032979480.1
SIO_010081: TAF13
subclass of: SO_0000673
so part of: TAF13
location: complement(join(994906..995238,1005390..1005487,1006819..1006909,1012922..1013072))
location: region:994906-1013072:-1
so has part: feature:1012922-1013072:-1:exon
so has part: feature:1006819-1006909:-1:exon
so has part: feature:1005390-1005487:-1:exon
so has part: feature:994906-995238:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1012922-1013072:-1:exon

position:1012922:-1
position: 1012922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1006819-1006909:-1:exon

position:1006819:-1
position: 1006819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006909:-1
position: 1006909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1005390-1005487:-1:exon

position:1005390:-1
position: 1005390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005487:-1
position: 1005487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:994906-995238:-1:exon

position:995238:-1
position: 995238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TAF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 13
translation: MTSPHRAMADEEDDFMGEEEGEEGAVATATASSSGQRGRHRLFSKELRCMMYGFGDDQNPYTECVDLLEDLLTEFITETTHRAIAVGRPGRLQVEDLVFLVRKDERKFSRMKELLTMNEELKKARKAFDEATYGT
SIO_010081: TAF13
subclass of: SO_0000673
so part of: TAF13
location: complement(join(995068..995238,1005390..1005487,1006819..1006909,1012922..1012969))
location: region:995068-1012969:-1
so has part: feature:1012922-1012969:-1:exon
so has part: feature:1006819-1006909:-1:exon
so has part: feature:1005390-1005487:-1:exon
so has part: feature:995068-995238:-1:exon

XP_032835371.1
type: Protein
SIO_000068: ncbiprotein

position:995068:-1
position: 995068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012969:-1
position: 1012969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1012922-1012969:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1006819-1006909:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1005390-1005487:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:995068-995238:-1:exon

DAP
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: DAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1028546..1046739)
location: region:1028546-1046739:-1
so has part: feature:1028546-1046739:-1:exon
subclass of: SO_0000010

116957385
type: Gene
SIO_000068: ncbigene

position:1028546:-1
position: 1028546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046739:-1
position: 1046739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028546-1046739:-1:exon

DAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: DAP
product: death associated protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_032979506.1
SIO_010081: DAP
subclass of: SO_0000673
so part of: DAP
location: complement(join(1028546..1028742,1029820..1029868,1033059..1033179,1046480..1046739))
location: region:1028546-1046739:-1
so has part: feature:1046480-1046739:-1:exon
so has part: feature:1033059-1033179:-1:exon
so has part: feature:1029820-1029868:-1:exon
so has part: feature:1028546-1028742:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1046480-1046739:-1:exon

position:1046480:-1
position: 1046480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1033059-1033179:-1:exon

position:1033059:-1
position: 1033059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1033179:-1
position: 1033179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1029820-1029868:-1:exon

position:1029820:-1
position: 1029820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029868:-1
position: 1029868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1028546-1028742:-1:exon

position:1028742:-1
position: 1028742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: DAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: death-associated protein 1
translation: MASPPKEHPDLKGGHLPAVRAGGMRIVQKHHPGSPAAPVPSKPDEHGEEEEEEEETPAPPAPKPPVVVVSGAIARGDKDFPPEAVKVAHEKPQPKVERNWATPHVNAHIQQPRK
SIO_010081: DAP
subclass of: SO_0000673
so part of: DAP
location: complement(join(1028623..1028742,1029820..1029868,1033059..1033179,1046480..1046534))
location: region:1028623-1046534:-1
so has part: feature:1046480-1046534:-1:exon
so has part: feature:1033059-1033179:-1:exon
so has part: feature:1029820-1029868:-1:exon
so has part: feature:1028623-1028742:-1:exon

XP_032835397.1
type: Protein
SIO_000068: ncbiprotein

position:1028623:-1
position: 1028623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046534:-1
position: 1046534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046480-1046534:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1033059-1033179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029820-1029868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1028623-1028742:-1:exon

UBE2J1
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: UBE2J1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1057893..1093421
location: region:1057893-1093421:1
so has part: feature:1057893-1093421:1:exon
subclass of: SO_0000010

116957377
type: Gene
SIO_000068: ncbigene

position:1057893:1
position: 1057893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093421:1
position: 1093421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057893-1093421:1:exon

UBE2J1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: UBE2J1
product: ubiquitin conjugating enzyme E2 J1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032979495.1
SIO_010081: UBE2J1
subclass of: SO_0000673
so part of: UBE2J1
location: join(1057893..1058057,1064088..1064161,1069565..1069696,1070227..1070311,1072876..1072981,1085432..1085555,1086234..1086345,1086787..1086857,1090198..1090303,1093399..1093421)
location: region:1057893-1093421:1
so has part: feature:1057893-1058057:1:exon
so has part: feature:1064088-1064161:1:exon
so has part: feature:1069565-1069696:1:exon
so has part: feature:1070227-1070311:1:exon
so has part: feature:1072876-1072981:1:exon
so has part: feature:1085432-1085555:1:exon
so has part: feature:1086234-1086345:1:exon
so has part: feature:1086787-1086857:1:exon
so has part: feature:1090198-1090303:1:exon
so has part: feature:1093399-1093421:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1057893-1058057:1:exon

position:1058057:1
position: 1058057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1064088-1064161:1:exon

position:1064088:1
position: 1064088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064161:1
position: 1064161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1069565-1069696:1:exon

position:1069565:1
position: 1069565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069696:1
position: 1069696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1070227-1070311:1:exon

position:1070227:1
position: 1070227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070311:1
position: 1070311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1072876-1072981:1:exon

position:1072876:1
position: 1072876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072981:1
position: 1072981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1085432-1085555:1:exon

position:1085432:1
position: 1085432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085555:1
position: 1085555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1086234-1086345:1:exon

position:1086234:1
position: 1086234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086345:1
position: 1086345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1086787-1086857:1:exon

position:1086787:1
position: 1086787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086857:1
position: 1086857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1090198-1090303:1:exon

position:1090198:1
position: 1090198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090303:1
position: 1090303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1093399-1093421:1:exon

position:1093399:1
position: 1093399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2J1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: UBE2J1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 J1
translation: MESRYSLRSPAVKRLMKEAQELREPTQHYFAQPLEDNLFEWHFSVRGPPDSDFEGGVYHGRIILPPEYPMRPPSIIMLTASGRFEVGKKICLSISGHHPETWQPSWSIRTALLALIGFMPTKGEGAIGSLDYSAEERRQLAKRSREFVCEGCGERLRAALPEAAEGPGPDDSEAHELARQISFKPEATAPGTQPPEGSGSGGGGGGGGGIDSASSDSIASTGPSPSPSEPQEESGESGAQRLRPPSPASTEPRQRVATTATTATTATTTATTTSSSAAAADPETRSP
SIO_010081: UBE2J1
subclass of: SO_0000673
so part of: UBE2J1
location: join(1058027..1058057,1064088..1064161,1069565..1069696,1070227..1070311,1072876..1072981,1085432..1085555,1086234..1086345,1086787..1086857,1090198..1090303,1093399..1093421)
location: region:1058027-1093421:1
so has part: feature:1058027-1058057:1:exon
so has part: feature:1064088-1064161:1:exon
so has part: feature:1069565-1069696:1:exon
so has part: feature:1070227-1070311:1:exon
so has part: feature:1072876-1072981:1:exon
so has part: feature:1085432-1085555:1:exon
so has part: feature:1086234-1086345:1:exon
so has part: feature:1086787-1086857:1:exon
so has part: feature:1090198-1090303:1:exon
so has part: feature:1093399-1093421:1:exon

XP_032835386.1
type: Protein
SIO_000068: ncbiprotein

position:1058027:1
position: 1058027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058027-1058057:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064088-1064161:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069565-1069696:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070227-1070311:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072876-1072981:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1085432-1085555:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1086234-1086345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1086787-1086857:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1090198-1090303:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1093399-1093421:1:exon

MYCBP
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: MYCBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1101609..1119475
location: region:1101609-1119475:1
so has part: feature:1101609-1119475:1:exon
subclass of: SO_0000010

116957354
type: Gene
SIO_000068: ncbigene

position:1101609:1
position: 1101609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119475:1
position: 1119475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1101609-1119475:1:exon

MYCBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: MYCBP
product: MYC binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_032979462.1
SIO_010081: MYCBP
subclass of: SO_0000673
so part of: MYCBP
location: join(1101609..1101807,1109004..1109076,1112431..1112479,1116429..1116558,1118575..1119475)
location: region:1101609-1119475:1
so has part: feature:1101609-1101807:1:exon
so has part: feature:1109004-1109076:1:exon
so has part: feature:1112431-1112479:1:exon
so has part: feature:1116429-1116558:1:exon
so has part: feature:1118575-1119475:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1101609-1101807:1:exon

position:1101807:1
position: 1101807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1109004-1109076:1:exon

position:1109004:1
position: 1109004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109076:1
position: 1109076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1112431-1112479:1:exon

position:1112431:1
position: 1112431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112479:1
position: 1112479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1116429-1116558:1:exon

position:1116429:1
position: 1116429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116558:1
position: 1116558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1118575-1119475:1:exon

position:1118575:1
position: 1118575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYCBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: MYCBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-Myc-binding protein
translation: MASYRAADSKREEFRRYLEKSGVLDALTKVLVGLYEEPDKPNNALDFLKQHLSSAGPEGADVEALRLEASELRLKLDSLAEENRELKGKLARYEAAADEGRTE
SIO_010081: MYCBP
subclass of: SO_0000673
so part of: MYCBP
location: join(1101793..1101807,1109004..1109076,1112431..1112479,1116429..1116558,1118575..1118619)
location: region:1101793-1118619:1
so has part: feature:1101793-1101807:1:exon
so has part: feature:1109004-1109076:1:exon
so has part: feature:1112431-1112479:1:exon
so has part: feature:1116429-1116558:1:exon
so has part: feature:1118575-1118619:1:exon

XP_032835353.1
type: Protein
SIO_000068: ncbiprotein

position:1101793:1
position: 1101793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118619:1
position: 1118619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1101793-1101807:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1109004-1109076:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1112431-1112479:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1116429-1116558:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1118575-1118619:1:exon

LOC116957390
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957390
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1280857..1333544)
location: region:1280857-1333544:-1
so has part: feature:1280857-1333544:-1:exon
subclass of: SO_0000010

116957390
type: Gene
SIO_000068: ncbigene

position:1280857:-1
position: 1280857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333544:-1
position: 1333544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1280857-1333544:-1:exon

LOC116957390
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957390
product: uncharacterized LOC116957390
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032979510.1
SIO_010081: LOC116957390
subclass of: SO_0000673
so part of: LOC116957390
location: complement(join(1280857..1282022,1284628..1284746,1291865..1291947,1293550..1293763,1295635..1295841,1304924..1305134,1308603..1308822,1311411..1312627,1315982..1316122,1321388..1321509,1325086..1325106,1327282..1327340,1333274..1333544))
location: region:1280857-1333544:-1
so has part: feature:1333274-1333544:-1:exon
so has part: feature:1327282-1327340:-1:exon
so has part: feature:1325086-1325106:-1:exon
so has part: feature:1321388-1321509:-1:exon
so has part: feature:1315982-1316122:-1:exon
so has part: feature:1311411-1312627:-1:exon
so has part: feature:1308603-1308822:-1:exon
so has part: feature:1304924-1305134:-1:exon
so has part: feature:1295635-1295841:-1:exon
so has part: feature:1293550-1293763:-1:exon
so has part: feature:1291865-1291947:-1:exon
so has part: feature:1284628-1284746:-1:exon
so has part: feature:1280857-1282022:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1333274-1333544:-1:exon

position:1333274:-1
position: 1333274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1327282-1327340:-1:exon

position:1327282:-1
position: 1327282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327340:-1
position: 1327340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1325086-1325106:-1:exon

position:1325086:-1
position: 1325086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1325106:-1
position: 1325106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1321388-1321509:-1:exon

position:1321388:-1
position: 1321388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1321509:-1
position: 1321509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1315982-1316122:-1:exon

position:1315982:-1
position: 1315982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1316122:-1
position: 1316122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1311411-1312627:-1:exon

position:1311411:-1
position: 1311411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1312627:-1
position: 1312627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1308603-1308822:-1:exon

position:1308603:-1
position: 1308603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1308822:-1
position: 1308822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1304924-1305134:-1:exon

position:1304924:-1
position: 1304924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305134:-1
position: 1305134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1295635-1295841:-1:exon

position:1295635:-1
position: 1295635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295841:-1
position: 1295841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1293550-1293763:-1:exon

position:1293550:-1
position: 1293550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293763:-1
position: 1293763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1291865-1291947:-1:exon

position:1291865:-1
position: 1291865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291947:-1
position: 1291947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1284628-1284746:-1:exon

position:1284628:-1
position: 1284628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284746:-1
position: 1284746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1280857-1282022:-1:exon

position:1282022:-1
position: 1282022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957390
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957390
translation: MQKGFQKVPGFKELRVTGFRKRKRPTGSRGSSVVVRYEAEFEDGVAESDWTERGGGLLQGNLVTSATGAGEANPRRESNRDWRKVVAAALSDRTLTGADASQDLQAAALLKLSEAIAEGSGLEPGEYSVVGFSDGVEKDDGGGGGGGGAMTATEASPVQTTPQHDQQEHQQEDVEQEQSAMEDSVQTTGTAAETQTDVEEVENEEEEASAEIETGEESAADDDVVVLEAHLMPSSLEEETANGRPGASYHHRDEHQDHQHDDHLHFLHEVPLDGDALAGSTEGGHDPETVMAEAVVDEAAAAEEEEEAEEILGGESSGDEVAMSVGGGGGGGGDDPGYHLGTSAEVEADVVVVVVADEGAAGTPGGPGEGGGATELAGDESGGDGGDGRGEGGGDEGGEGSGGDGGQGGEAEEGTQGGEGGDNGERGDGEGVGKGGQGGEVGTAEEAGDEGVESLDEAQAVQWDDRWAGPLMTSPAVAVSGSRDLIVFFSLRVTNMAFSEDLFNKSSSEYRALEQNFLELLVPYLQSNLSGFQNMEIMNFRNGSVVVNSRMKFAHHVPNNVTRAVHVILERFCNAAYQHMNMEIDRQSLDVESGDQADPCKFEACNDFSDCLPNRWSGEAECVCRPGYASVGGLPCQSLCDLDPSYCLHDGKCDVVDGQGAICRCRVGENWWYRGERCQEFVSEPLVVGISLASVAGFLLVCSAIVFVVARALRGSRRDKGEERGGGGGSSSFSSGDCGGSLSTSPEDAVKYNPAYESDAPTTTRYQQRRSPPSAPSLLASVNDVGSSSSEPSHIYQHAELTREEIEERMRIVDLYALDKHRTTQLKKQIKWQQQQQQSSSSSSGGAKGGTSGHDG
SIO_010081: LOC116957390
subclass of: SO_0000673
so part of: LOC116957390
location: complement(join(1284671..1284746,1291865..1291947,1293550..1293763,1295635..1295841,1304924..1305134,1308603..1308822,1311411..1312627,1315982..1316122,1321388..1321509,1325086..1325106,1327282..1327340))
location: region:1284671-1327340:-1
so has part: feature:1327282-1327340:-1:exon
so has part: feature:1325086-1325106:-1:exon
so has part: feature:1321388-1321509:-1:exon
so has part: feature:1315982-1316122:-1:exon
so has part: feature:1311411-1312627:-1:exon
so has part: feature:1308603-1308822:-1:exon
so has part: feature:1304924-1305134:-1:exon
so has part: feature:1295635-1295841:-1:exon
so has part: feature:1293550-1293763:-1:exon
so has part: feature:1291865-1291947:-1:exon
so has part: feature:1284671-1284746:-1:exon

XP_032835401.1
type: Protein
SIO_000068: ncbiprotein

position:1284671:-1
position: 1284671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327282-1327340:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1325086-1325106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1321388-1321509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1315982-1316122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1311411-1312627:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1308603-1308822:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1304924-1305134:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1295635-1295841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1293550-1293763:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1291865-1291947:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1284671-1284746:-1:exon

LOC116957378
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1411647..1421583
location: region:1411647-1421583:1
so has part: feature:1411647-1421583:1:exon
subclass of: SO_0000010

116957378
type: Gene
SIO_000068: ncbigene

position:1411647:1
position: 1411647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1421583:1
position: 1421583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1411647-1421583:1:exon

LOC116957378
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957378
product: gap junction beta-1 protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032979496.1
SIO_010081: LOC116957378
subclass of: SO_0000673
so part of: LOC116957378
location: join(1411647..1411781,1412950..1413126,1420567..1420937,1421112..1421583)
location: region:1411647-1421583:1
so has part: feature:1411647-1411781:1:exon
so has part: feature:1412950-1413126:1:exon
so has part: feature:1420567-1420937:1:exon
so has part: feature:1421112-1421583:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1411647-1411781:1:exon

position:1411781:1
position: 1411781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1412950-1413126:1:exon

position:1412950:1
position: 1412950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1413126:1
position: 1413126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1420567-1420937:1:exon

position:1420567:1
position: 1420567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1420937:1
position: 1420937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1421112-1421583:1:exon

position:1421112:1
position: 1421112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957378
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-1 protein-like
translation: MGDFGLLGSLLDSAQEHSTAVGRVWLSVLFVLRILVLTAGADQVWGDEQSDFSCNTQQPGCENVCYDTAFPISHVRYWGLQVIAVSTPALAYLGHVLHVVRQESKQLSAPPASGKPPGPPRVSADGRVPIRGALLRSYLLSLACRALVEASFIYGQGRLFGLSLGHLYRCRTWPCPNVVDCFVSRATEKTVYVRLMLAASSLGLALNVAEFAYLLCRAGGRRRRRRLYQQAEPAGAAGAGGAGGAGVFGDAGRPPGPSPRDWGSREAGRLRGEPPGLPGWEPPHPVAAMSHGAVMSHESVMSPAVMSPAMMSPAVMSPAVMSPAVMSPAMMSPAVMSPAVMSPAMMSPAVMSPAVMSPAVVSEGAYGGRPGSSRSRHGDLQV
SIO_010081: LOC116957378
subclass of: SO_0000673
so part of: LOC116957378
location: join(1411653..1411781,1412950..1413126,1420567..1420937,1421112..1421583)
location: region:1411653-1421583:1
so has part: feature:1411653-1411781:1:exon
so has part: feature:1412950-1413126:1:exon
so has part: feature:1420567-1420937:1:exon
so has part: feature:1421112-1421583:1:exon

XP_032835387.1
type: Protein
SIO_000068: ncbiprotein

position:1411653:1
position: 1411653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1411653-1411781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1412950-1413126:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1420567-1420937:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1421112-1421583:1:exon

LOC116957375
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1526615..1548610)
location: region:1526615-1548610:-1
so has part: feature:1526615-1548610:-1:exon
subclass of: SO_0000010

116957375
type: Gene
SIO_000068: ncbigene

position:1526615:-1
position: 1526615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548610:-1
position: 1548610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1526615-1548610:-1:exon

LOC116957375
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957375
product: interferon-induced very large GTPase 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032979492.1
SIO_010081: LOC116957375
subclass of: SO_0000673
so part of: LOC116957375
location: complement(join(1526615..1534792,1540651..1540750,1548548..1548610))
location: region:1526615-1548610:-1
so has part: feature:1548548-1548610:-1:exon
so has part: feature:1540651-1540750:-1:exon
so has part: feature:1526615-1534792:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1548548-1548610:-1:exon

position:1548548:-1
position: 1548548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1540651-1540750:-1:exon

position:1540651:-1
position: 1540651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1540750:-1
position: 1540750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1526615-1534792:-1:exon

position:1534792:-1
position: 1534792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116957375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced very large GTPase 1-like
translation: MSKAEDHDIRAQDELAKVLTDLGLNATFWIPKLRDILDITHLQALQYCGAEEFQIIGPHCRHSWEKKALCKLLEMSGNDVVVSKQSQQCEPIGNKQKQDAPTKQHPEQIHQKTLTRSGEANIETEAEQRMELKGAKETPLCDGSHSNYMANTSLKQLDLADISTLRGTISHLSLLQNASKGLALEGVYRTGQIKDRLKKRGKLLNIPMSFDLDGPVHQPMIKKQGFSSSEEENIFETAVEIMGFNTMTTEGFLEALNEEINSRHSKALHIEDKQQENPTDTCIHCAKYLYLPLASGRLDFDRLKLSDEALEALQSVENTFKTARDSFKTHVLRSRFRSFFETFGSHAHTGPVHFGGIFKWKASTEGISSDEEKEERNMLSEAVEQYSTSAYNSSGSAGGVSRMASEFTTEFSEKYNAPRLSKVTFSVGAIGGSPGIYSLQQWKTDIVSNTKAWSVIDRGTSLVPVWEIVKFNHKDIFQNTLIASRLKEAYTLLTNQNPSFCLEDILVSANAKARSVMQDIKHWQESDMENNLKKLLDLKQTLYDETKSNLIWMNTCLSHPALQSFLSNLVTAPAKTVKITELMRSIMEPNSCEVDSFPQFASIMQWLNESEGVLTQLSDFKDLVNILTKAEEHIKVDFSPTYSERDEKISKEITHAFNLFCQSLRTTKLIEQELLITSVASAVGYCVKEKRFQHPLSYDNIDQLQRALESAYGEYSRLMQQDKSRAQAYVLRTGLSNVRTLAEKRKQFDFMRSQVEEAMCAEVSHVMKCSEIGPTDWDKLDMMLESIIAGTFKEQTCSSKKERTMQNARTISQAEGEEDAFLRQEEFQNKPSIQPRQNNEELWNLLERLALINYYPKKLHTSDVCVINMSPIQSNPVRCTEQELALSYLQKLMMIDYRARRVSFQCENRNKVKSNKFYQSTYTNTCPNSDDFFSDDNNYDDIINNSDVPRTNTETHIHPMDLQMAIFHCGDNFVRQYIYNKLSFIQFALPLLVPNPCRSEIEFPMWSFRQIKKTWNFRDASTTQWKSKSCAISDANAALVSFVRFGESPASKSQIMNSLLGNQTHRVFFNRHCRGSSRNGQLMKGVAEIAWYLPGGKDDDVFNDCIAFTNLHGDAREHKTQVEFLHEISSINVILLSDGDRNEEGKRILDECLRSPKPLICLCADKKKVSSGAFGTNAKIAIENRNEAELIDELASIINWFLGNSEGKKNIEAYSALAKKYGFIVDEDDEQCKDGKTMAKVLLSLISDSPLCSRKETFLPLQGKLWQSWCKKDKELTRMTVRGAQSVEEYKSNILGEKTRIRKAQLERAFPLNEFMSSLIEILNHYSRTVKTYFLHWLRIYLDEMSADRLSQLHLTYHQAWTAIKALKTQGFNTSIIAIKQSELDKISGELDASSFGIDHVFREVGQIFEASQTTPSVAKISATLPKIAAEMLISGFPLELMDGDAAHVPLIWISSILDAIIDEIGNVKLFVISILGIQSSGKSTLLNAMFGLQFPVGNGRCTRGAYMQLVKVEAEFSEQLGYDFVLIVDTEGLRSVELSNATRSRDNQLATFVIGLGNMTVINIFGENPSEMQDILQIAVQAFLRMRKVRLSPSCVFVHQNVGEVTAHDKNMEGRRRFQEKLDEMTRMAADQEQCAVASFDAVIRFDVNSQIRYFAHLWEGDSPMAPPNPSYCQNVKDLKEMLLRNAKKEKTVNVLKISEFKARINDLWTALLAENFVFSFKNTLEIAAYTKLEEMYGKWTWELRSHVLQQENKLYNGIDNNTDAMTRSQIERIILSNYQDIKKKIEEHFNSADDAELLVQWKVKFEKGFETVKEELVSDAFKNYSALMAQQDKKRNIDRQRSSYEGQLIIKSKDLASKLRDKNVNEAEWDRAFDEIWKDWIKEIKNGMTSPATLDVKKIIVNLLYDAHKNQIQHLNKVIWKYHKGTEFDINQNDHIMMNAKWLGYRSYRFKDEDTKSIKELISDVKLNVNSCITTQEIHKTNFNPSYVHAILEVMNSD…
SIO_010081: LOC116957375
subclass of: SO_0000673
so part of: LOC116957375
location: complement(1527545..1534789)
location: region:1527545-1534789:-1
so has part: feature:1527545-1534789:-1:exon

XP_032835383.1
type: Protein
SIO_000068: ncbiprotein

position:1527545:-1
position: 1527545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1534789:-1
position: 1534789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1527545-1534789:-1:exon

LOC116957379
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957379
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2204458..2243933
location: region:2204458-2243933:1
so has part: feature:2204458-2243933:1:exon
subclass of: SO_0000010

116957379
type: Gene
SIO_000068: ncbigene

position:2204458:1
position: 2204458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2243933:1
position: 2243933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2204458-2243933:1:exon

LOC116957379
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957379
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032979497.1
SIO_010081: LOC116957379
subclass of: SO_0000673
so part of: LOC116957379
location: join(2204458..2205588,2221911..2221979,2222208..2222350,2230212..2230470,2232023..2232497,2242362..2242609,2242794..2242874,2243806..2243933)
location: region:2204458-2243933:1
so has part: feature:2204458-2205588:1:exon
so has part: feature:2221911-2221979:1:exon
so has part: feature:2222208-2222350:1:exon
so has part: feature:2230212-2230470:1:exon
so has part: feature:2232023-2232497:1:exon
so has part: feature:2242362-2242609:1:exon
so has part: feature:2242794-2242874:1:exon
so has part: feature:2243806-2243933:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2204458-2205588:1:exon

position:2205588:1
position: 2205588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2221911-2221979:1:exon

position:2221911:1
position: 2221911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2221979:1
position: 2221979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2222208-2222350:1:exon

position:2222208:1
position: 2222208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2222350:1
position: 2222350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2230212-2230470:1:exon

position:2230212:1
position: 2230212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2230470:1
position: 2230470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2232023-2232497:1:exon

position:2232023:1
position: 2232023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2232497:1
position: 2232497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2242362-2242609:1:exon

position:2242362:1
position: 2242362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2242609:1
position: 2242609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2242794-2242874:1:exon

position:2242794:1
position: 2242794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2242874:1
position: 2242874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2243806-2243933:1:exon

position:2243806:1
position: 2243806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957379
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957379
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like
translation: MSAPAHYNIQLVNCASLGDFEQQLQAAAAAASSHELAETASVVEAAEAAAVAAAVHAENETTVVEHVEVVGAVGQEELQRVWDRASTLMLINVYKDFIAKFNSRKYRKKTLWVEITEQLQQMGLKFQPVQVEGRWKTLNAAYRKALVPVRRSTSSSSAAAASERRSCCLFFNELHGILGDRARAAAAAGGRAGGEGGNMAGAAGGGGGQFDDGAVSLIPVDAPPTRPSPSSSPHGTSAAAASAAAASAAASSSSSDSASHPGRLGPRLAGGGPSAARGLKRRRTSGRAGGGAGGGVGGEPSGAAAAAAGDEAAGQEGPDEVVVVGLGDEVGALLREIVAERREAERRRSELALRMHQDRMKALGAVLEVFRGREVGRLTSPLDVALRRREVGRLTSLLDVALRRREVGRLTSPLDVTLRRREVGRLTSPLDVALRRREVGRLTSPLDVALRQERREKLAVSSPLDVALRQESSWPSNVSAGREKLAISESAQSALDGRGCGTGEGRATVGERGADDGRGSRGE
SIO_010081: LOC116957379
subclass of: SO_0000673
so part of: LOC116957379
location: join(2205420..2205588,2221911..2221979,2222208..2222350,2230212..2230470,2232023..2232497,2242362..2242609,2242794..2242874,2243806..2243933)
location: region:2205420-2243933:1
so has part: feature:2205420-2205588:1:exon
so has part: feature:2221911-2221979:1:exon
so has part: feature:2222208-2222350:1:exon
so has part: feature:2230212-2230470:1:exon
so has part: feature:2232023-2232497:1:exon
so has part: feature:2242362-2242609:1:exon
so has part: feature:2242794-2242874:1:exon
so has part: feature:2243806-2243933:1:exon

XP_032835388.1
type: Protein
SIO_000068: ncbiprotein

position:2205420:1
position: 2205420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2205420-2205588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2221911-2221979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2222208-2222350:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2230212-2230470:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2232023-2232497:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2242362-2242609:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2242794-2242874:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2243806-2243933:1:exon

LOC116957380
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957380
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2362638..2377281
location: region:2362638-2377281:1
so has part: feature:2362638-2377281:1:exon
subclass of: SO_0000010

116957380
type: Gene
SIO_000068: ncbigene

position:2362638:1
position: 2362638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2377281:1
position: 2377281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2362638-2377281:1:exon

LOC116957380
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957380
product: up-regulator of cell proliferation-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 19 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032979498.1
SIO_010081: LOC116957380
subclass of: SO_0000673
so part of: LOC116957380
location: join(2362638..2362938,2363638..2363716,2372768..2376492,2377196..2377281)
location: region:2362638-2377281:1
so has part: feature:2362638-2362938:1:exon
so has part: feature:2363638-2363716:1:exon
so has part: feature:2372768-2376492:1:exon
so has part: feature:2377196-2377281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2362638-2362938:1:exon

position:2362938:1
position: 2362938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2363638-2363716:1:exon

position:2363638:1
position: 2363638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2363716:1
position: 2363716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2372768-2376492:1:exon

position:2372768:1
position: 2372768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2376492:1
position: 2376492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2377196-2377281:1:exon

position:2377196:1
position: 2377196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957380
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: up-regulator of cell proliferation-like
translation: MVTWTSLALAVCEPIEGGSKRPQLRGVHGQLREHEQEGPGTELHATPRQVPLSDWLAGSIRRGCRVRASNREGGQLAASDRHLVMAQRDQRDQRGPGVSEEQLLPSMKSIVEAKRPKERLQRRNKQDQSVPPIQNVDIDNRAVHPAKEVQTPMKNTRFEKLLMDLDLMKFYPQKLTLAKALQISKVTRSEEKPKCLKDVAMHFIQNLLRANSSSRSTEFTNSETLVQYTPKSTSNYRRRSNRVGKSRASNSIDILDLITALFLCSDTFLQQALMVKMSQCHFALPLLLPDLNEGNITFLVQAMQSVVHIWGPHHKLAIKGYTEDSMSVVAMPMIAFVRLGGSSISKSELLNSILSNDKEDVFVHRDMQSGNSLRHISNGLVEISFYFPPGDKSSDLWSDIFAVLNLRGDVRESLTQLKFLKNACDAMVILIENFGEDERKFVTTDFNSNSKMFWLKNTDENDETDELLEQTLDELGVQDVNVCDLEKNNKVIIGNLFRKFMKDVLTRCNVTNNLKMISESVTDLTIKIDANNIKRQRSAEAIKDILQKMGACNGVRENCFPCQSEKLWHKWSDTEKELCRLKKGSGLEYTNQLRTKKRNLRLEQVKRISPTMTEFISKNSKFDEEEYKLFLHGLELELNDKTRKTMRDKNKIVNALGAHDISKELQPSNMKSSLSTVGLEHFFREVAQIYEASKDCEMHPDYKNLSARMAHLFLDGFPMELLDGDAGCIPIDWVTDVFGEVNNILLGDVNNILKRDPRIFVLSVLGVQSSGKSTLLNTMFGLQFAVSSGRCTRGAFMQLLRIDDELTEELGFEFILVIDTEGLKALELATLENSYEHDNELATLAIGLGNATILNVKMENAEEMKDILQIVVHAFLRMTEGGKKPSCVFVHQNSGGVSAHEKNKKDQERLLQILNEMTEAAAKMEEKSMYYKRFTDVIDYDAENDKWYIPGLRAGGSSMARVSCTYSDEVWKLKKHLLEKCKKRAKLGNIYTLPEFSAWIKTMWTAMKKETYVFHFRNFLVLEAYNTLCTAYTGWELNLRMNIISWMQNVSNKVKRASHEELLNLKRSLAKDVDDEVLKEECKFKDCLSDYFKKVSEKNNLVEKYRQDFLISVQQLCSVVSNETLSKCKECIDTHECLESYRNVETQYKQTIGGKVKRVLENCTHSDKGLDEEDLQKTFNVIWSETVSDLKRITLQECDVKRDMEKSLLYLTKTDAGHFKEKLQSCSWSDIGKNDFKTLNTHYSVIIHKAKSLEENTALNSIVNLSSDIIDKCKQFIQTKANAATDYWPAYCDELLQQVDLILKNTPDDTKQYSKSFVIDIKMYVCSIAIDPFTKQHERFLKLNDPYTRLEELKGSYFNLLTSMWAAVLIGSTGQRCITLKGCAAGSVATGL
SIO_010081: LOC116957380
subclass of: SO_0000673
so part of: LOC116957380
location: join(2362650..2362938,2363638..2363716,2372768..2376492,2377196..2377281)
location: region:2362650-2377281:1
so has part: feature:2362650-2362938:1:exon
so has part: feature:2363638-2363716:1:exon
so has part: feature:2372768-2376492:1:exon
so has part: feature:2377196-2377281:1:exon

XP_032835389.1
type: Protein
SIO_000068: ncbiprotein

position:2362650:1
position: 2362650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2362650-2362938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2363638-2363716:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2372768-2376492:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2377196-2377281:1:exon

LOC116957381
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957381
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2396045..2404329
location: region:2396045-2404329:1
so has part: feature:2396045-2404329:1:exon
subclass of: SO_0000010

116957381
type: Gene
SIO_000068: ncbigene

position:2396045:1
position: 2396045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2404329:1
position: 2404329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2396045-2404329:1:exon

LOC116957381
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957381
product: proline-rich receptor-like protein kinase PERK2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032979499.1
SIO_010081: LOC116957381
subclass of: SO_0000673
so part of: LOC116957381
location: join(2396045..2396098,2398765..2399158,2404028..2404120,2404293..2404329)
location: region:2396045-2404329:1
so has part: feature:2396045-2396098:1:exon
so has part: feature:2398765-2399158:1:exon
so has part: feature:2404028-2404120:1:exon
so has part: feature:2404293-2404329:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2396045-2396098:1:exon

position:2396098:1
position: 2396098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2398765-2399158:1:exon

position:2398765:1
position: 2398765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2399158:1
position: 2399158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2404028-2404120:1:exon

position:2404028:1
position: 2404028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2404120:1
position: 2404120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2404293-2404329:1:exon

position:2404293:1
position: 2404293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957381
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957381
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich receptor-like protein kinase PERK2
translation: MSAPVPWKLEPPQPPPQSAKPTPTPTPPPPPPSTTAPLCLDPVPPPIETLPSELPPGAGGRGPWQPRAGRRGSEETFERRPPPLGPRHSLPPPPMTTPPPPPPRPPSLTRDVGGVGARAPAGNVGAGAGDVKKHQQQQQVKGEELSLTGLVINVKRGSDTVPVVACSGG
SIO_010081: LOC116957381
subclass of: SO_0000673
so part of: LOC116957381
location: join(2398779..2399158,2404028..2404120,2404293..2404329)
location: region:2398779-2404329:1
so has part: feature:2398779-2399158:1:exon
so has part: feature:2404028-2404120:1:exon
so has part: feature:2404293-2404329:1:exon

XP_032835390.1
type: Protein
SIO_000068: ncbiprotein

position:2398779:1
position: 2398779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2398779-2399158:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2404028-2404120:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2404293-2404329:1:exon

LOC116957382
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957382
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2403943..2484824
location: region:2403943-2484824:1
so has part: feature:2403943-2484824:1:exon
subclass of: SO_0000010

116957382
type: Gene
SIO_000068: ncbigene

position:2403943:1
position: 2403943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2484824:1
position: 2484824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2403943-2484824:1:exon

LOC116957382
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957382
product: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032979500.1
SIO_010081: LOC116957382
subclass of: SO_0000673
so part of: LOC116957382
location: join(2403943..2404120,2405761..2405824,2413577..2413703,2414493..2414662,2420094..2420200,2429863..2430062,2434107..2434192,2435028..2435234,2438496..2438646,2442135..2442245,2447674..2447812,2448418..2448532,2461085..2461439,2470605..2470668,2476442..2476605,2478547..2478753,2480068..2480173,2483782..2483940,2484708..2484824)
location: region:2403943-2484824:1
so has part: feature:2403943-2404120:1:exon
so has part: feature:2405761-2405824:1:exon
so has part: feature:2413577-2413703:1:exon
so has part: feature:2414493-2414662:1:exon
so has part: feature:2420094-2420200:1:exon
so has part: feature:2429863-2430062:1:exon
so has part: feature:2434107-2434192:1:exon
so has part: feature:2435028-2435234:1:exon
so has part: feature:2438496-2438646:1:exon
so has part: feature:2442135-2442245:1:exon
so has part: feature:2447674-2447812:1:exon
so has part: feature:2448418-2448532:1:exon
so has part: feature:2461085-2461439:1:exon
so has part: feature:2470605-2470668:1:exon
so has part: feature:2476442-2476605:1:exon
so has part: feature:2478547-2478753:1:exon
so has part: feature:2480068-2480173:1:exon
so has part: feature:2483782-2483940:1:exon
so has part: feature:2484708-2484824:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2403943-2404120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2405761-2405824:1:exon

position:2405761:1
position: 2405761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2405824:1
position: 2405824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2413577-2413703:1:exon

position:2413577:1
position: 2413577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2413703:1
position: 2413703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2414493-2414662:1:exon

position:2414493:1
position: 2414493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2414662:1
position: 2414662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2420094-2420200:1:exon

position:2420094:1
position: 2420094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2420200:1
position: 2420200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2429863-2430062:1:exon

position:2429863:1
position: 2429863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2430062:1
position: 2430062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2434107-2434192:1:exon

position:2434107:1
position: 2434107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2434192:1
position: 2434192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2435028-2435234:1:exon

position:2435028:1
position: 2435028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2435234:1
position: 2435234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2438496-2438646:1:exon

position:2438496:1
position: 2438496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2438646:1
position: 2438646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2442135-2442245:1:exon

position:2442135:1
position: 2442135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2442245:1
position: 2442245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2447674-2447812:1:exon

position:2447674:1
position: 2447674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2447812:1
position: 2447812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2448418-2448532:1:exon

position:2448418:1
position: 2448418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2448532:1
position: 2448532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2461085-2461439:1:exon

position:2461085:1
position: 2461085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2461439:1
position: 2461439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2470605-2470668:1:exon

position:2470605:1
position: 2470605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2470668:1
position: 2470668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2476442-2476605:1:exon

position:2476442:1
position: 2476442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2476605:1
position: 2476605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2478547-2478753:1:exon

position:2478547:1
position: 2478547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2478753:1
position: 2478753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2480068-2480173:1:exon

position:2480068:1
position: 2480068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2480173:1
position: 2480173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2483782-2483940:1:exon

position:2483782:1
position: 2483782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2483940:1
position: 2483940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2484708-2484824:1:exon

position:2484708:1
position: 2484708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957382
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957382
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like
translation: MDWFLSLGSVTSVDRGQGVQPGVKVTVKGDSTISLTFDSVESRESLLKALLAVTTPLGGPPWPPWGRLVTRGALGLKGLRVLGVLHALCLHVHRDAQEAEAGLGLLFCDTRTMSVKEQAATTFTVTTPQVTYKFSTDSESERDSWLASLREAQEEALGDPELLERLSAVPGNESCADCGAPGPAWASLNLAVVVCTQCAGAHRSLGQNASRIRSLTIDQTAWTVDVVQMLLALGNERSNSFWAALVPPSEALGGEGLGGRGVAPTAADRADFVRAKYVEGKYRKVHRLYGSRQELQEALLEAVQRTDVLETLTLLFSGAEATAAAYAAALRGGQRAQAELISQNINTDLSGPVPPSPRHCVHMKGFLSKTKASTRPIDKRKSRDDFSLRWCTLQASALRYHLPGAPSGEPRGEISCRDIAGVFLQSGAHHGLPHTMQIHVLGRGPSEKLFLFGDEDEDNLRSWARGLIAESVPPWARALASGPWELVSHVGRATVQGVSLGEGGRPVGGLPPGRGALDWVPAWSRLSDASLLVVLEPPQRGGRGLAGGGTAAAAASAAAWDIAGGEGGGAEEGEETIVINLRRLHNLSVSSEGSRAKPDTSIRLVDRNWSLCIRLPGILGPARASSLVKSARGGAGRPLSQQPITDEDVVLAVAKCVEHVEQYGLMREGLYRTVGVASATEALVERLWADPRSAVLEPGQGNVELAASALKAILRQAPTSLIPSGSEWTSVAREADPQVKADKYRQRIASLPSTQRSTLHYLLQHLHKVQLYSSQNRMPVENLVTIFIPALFHTDLLEKQTARLLRDLIEMYPSISQGAHR
SIO_010081: LOC116957382
subclass of: SO_0000673
so part of: LOC116957382
location: join(2413583..2413703,2414493..2414662,2420094..2420200,2429863..2430062,2434107..2434192,2435028..2435234,2438496..2438646,2442135..2442245,2447674..2447812,2448418..2448532,2461085..2461439,2470605..2470668,2476442..2476605,2478547..2478753,2480068..2480173,2483782..2483940,2484708..2484711)
location: region:2413583-2484711:1
so has part: feature:2413583-2413703:1:exon
so has part: feature:2414493-2414662:1:exon
so has part: feature:2420094-2420200:1:exon
so has part: feature:2429863-2430062:1:exon
so has part: feature:2434107-2434192:1:exon
so has part: feature:2435028-2435234:1:exon
so has part: feature:2438496-2438646:1:exon
so has part: feature:2442135-2442245:1:exon
so has part: feature:2447674-2447812:1:exon
so has part: feature:2448418-2448532:1:exon
so has part: feature:2461085-2461439:1:exon
so has part: feature:2470605-2470668:1:exon
so has part: feature:2476442-2476605:1:exon
so has part: feature:2478547-2478753:1:exon
so has part: feature:2480068-2480173:1:exon
so has part: feature:2483782-2483940:1:exon
so has part: feature:2484708-2484711:1:exon

XP_032835391.1
type: Protein
SIO_000068: ncbiprotein

position:2413583:1
position: 2413583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2484711:1
position: 2484711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2413583-2413703:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2414493-2414662:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2420094-2420200:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2429863-2430062:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2434107-2434192:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2435028-2435234:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2438496-2438646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2442135-2442245:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2447674-2447812:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2448418-2448532:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2461085-2461439:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2470605-2470668:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2476442-2476605:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2478547-2478753:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2480068-2480173:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2483782-2483940:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2484708-2484711:1:exon

TMEM242
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TMEM242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2498690..2508788)
location: region:2498690-2508788:-1
so has part: feature:2498690-2508788:-1:exon
subclass of: SO_0000010

116957372
type: Gene
SIO_000068: ncbigene

position:2498690:-1
position: 2498690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2508788:-1
position: 2508788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2498690-2508788:-1:exon

TMEM242
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TMEM242
product: transmembrane protein 242
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_032979489.1
SIO_010081: TMEM242
subclass of: SO_0000673
so part of: TMEM242
location: complement(join(2498690..2499522,2502546..2502677,2506644..2506744,2508417..2508788))
location: region:2498690-2508788:-1
so has part: feature:2508417-2508788:-1:exon
so has part: feature:2506644-2506744:-1:exon
so has part: feature:2502546-2502677:-1:exon
so has part: feature:2498690-2499522:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2508417-2508788:-1:exon

position:2508417:-1
position: 2508417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2506644-2506744:-1:exon

position:2506644:-1
position: 2506644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2506744:-1
position: 2506744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2502546-2502677:-1:exon

position:2502546:-1
position: 2502546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2502677:-1
position: 2502677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2498690-2499522:-1:exon

position:2499522:-1
position: 2499522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM242
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TMEM242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 242
translation: MATESAQGAGGEGGEKLSALTGAALFVTLGLGGLLSGFSITVASARRKSPKCFDQTLPPGLETGSRLALRALGWGSAFAVGGTALLSLGVWGALSLWRQASVTPSPLADEVTTRPMTSQR
SIO_010081: TMEM242
subclass of: SO_0000673
so part of: TMEM242
location: complement(join(2499457..2499522,2502546..2502677,2506644..2506744,2508417..2508480))
location: region:2499457-2508480:-1
so has part: feature:2508417-2508480:-1:exon
so has part: feature:2506644-2506744:-1:exon
so has part: feature:2502546-2502677:-1:exon
so has part: feature:2499457-2499522:-1:exon

XP_032835380.1
type: Protein
SIO_000068: ncbiprotein

position:2499457:-1
position: 2499457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2508480:-1
position: 2508480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2508417-2508480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2506644-2506744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2502546-2502677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2499457-2499522:-1:exon

LOC116957371
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957371
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2531374..2538498
location: region:2531374-2538498:1
so has part: feature:2531374-2538498:1:exon
subclass of: SO_0000010

116957371
type: Gene
SIO_000068: ncbigene

position:2531374:1
position: 2531374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2538498:1
position: 2538498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2531374-2538498:1:exon

LOC116957371
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957371
product: uncharacterized LOC116957371
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_032979488.1
SIO_010081: LOC116957371
subclass of: SO_0000673
so part of: LOC116957371
location: join(2531374..2531647,2534192..2534321,2535466..2535971,2536982..2537114,2538318..2538498)
location: region:2531374-2538498:1
so has part: feature:2531374-2531647:1:exon
so has part: feature:2534192-2534321:1:exon
so has part: feature:2535466-2535971:1:exon
so has part: feature:2536982-2537114:1:exon
so has part: feature:2538318-2538498:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2531374-2531647:1:exon

position:2531647:1
position: 2531647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2534192-2534321:1:exon

position:2534192:1
position: 2534192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2534321:1
position: 2534321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2535466-2535971:1:exon

position:2535466:1
position: 2535466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2535971:1
position: 2535971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2536982-2537114:1:exon

position:2536982:1
position: 2536982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2537114:1
position: 2537114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2538318-2538498:1:exon

position:2538318:1
position: 2538318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957371
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957371
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116957371
translation: MPLPPPPSLQGRLLTLISLYGGQGSEVAASLEAEWAALSGGAVHCGGTEEGAAALSGGAVHCGGMEDEGAALSGGAVHCGGMEEGAAALPGGAVHCGGTEEGGVAVAEAVHRGGILTVGDLPAPLHAGSVGATRLGDEGGLVWEAAMTGYIQRQLQGSSWKLCSEFLAWPQCPLGSVPGQSRDPEAMVLTEFTLLEMADGDTGETRGESPSGWPCGGLSPCAPPPGPLWGVEELTLLKGSLQ
SIO_010081: LOC116957371
subclass of: SO_0000673
so part of: LOC116957371
location: join(2535479..2535971,2536982..2537114,2538318..2538420)
location: region:2535479-2538420:1
so has part: feature:2535479-2535971:1:exon
so has part: feature:2536982-2537114:1:exon
so has part: feature:2538318-2538420:1:exon

XP_032835379.1
type: Protein
SIO_000068: ncbiprotein

position:2535479:1
position: 2535479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2538420:1
position: 2538420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2535479-2535971:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2536982-2537114:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2538318-2538420:1:exon

LOC116957373
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957373
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2538609..2538841)
location: region:2538609-2538841:-1
so has part: feature:2538609-2538841:-1:exon
subclass of: SO_0000011

116957373
type: Gene
SIO_000068: ncbigene

position:2538609:-1
position: 2538609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2538841:-1
position: 2538841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2538609-2538841:-1:exon

LOC116957373
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116957373
product: uncharacterized LOC116957373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XR_004405162.1
SIO_010081: LOC116957373
subclass of: SO_0000673
so part of: LOC116957373
location: complement(join(2538609..2538640,2538701..2538730,2538791..2538841))
location: region:2538609-2538841:-1
so has part: feature:2538791-2538841:-1:exon
so has part: feature:2538701-2538730:-1:exon
so has part: feature:2538609-2538640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2538791-2538841:-1:exon

position:2538791:-1
position: 2538791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2538701-2538730:-1:exon

position:2538701:-1
position: 2538701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2538730:-1
position: 2538730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2538609-2538640:-1:exon

position:2538640:-1
position: 2538640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NDUFB4
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: NDUFB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2691232..2700682)
location: region:2691232-2700682:-1
so has part: feature:2691232-2700682:-1:exon
subclass of: SO_0000010

116957386
type: Gene
SIO_000068: ncbigene

position:2691232:-1
position: 2691232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2700682:-1
position: 2700682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2691232-2700682:-1:exon

NDUFB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: NDUFB4
product: NADH:ubiquinone oxidoreductase subunit B4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_032979507.1
SIO_010081: NDUFB4
subclass of: SO_0000673
so part of: NDUFB4
location: complement(join(2691232..2691579,2692287..2692433,2700355..2700682))
location: region:2691232-2700682:-1
so has part: feature:2700355-2700682:-1:exon
so has part: feature:2692287-2692433:-1:exon
so has part: feature:2691232-2691579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2700355-2700682:-1:exon

position:2700355:-1
position: 2700355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2692287-2692433:-1:exon

position:2692287:-1
position: 2692287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2692433:-1
position: 2692433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2691232-2691579:-1:exon

position:2691579:-1
position: 2691579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NDUFB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: NDUFB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4
translation: MAADVGSPSSPTAPPPPHHHRPPPPPPPRRPHDYRDVPGLFSLPAAFRASSAEGGAEAAAVREALRARSKRSYLGQLNDPHRVGLIDDPAMVRWQYARTHNVYPNFRPTAKTSLLGLLMSVVPIVGLTVFFYRDRKKTVAAIESGSADRTFKMYG
SIO_010081: NDUFB4
subclass of: SO_0000673
so part of: NDUFB4
location: complement(join(2691517..2691579,2692287..2692433,2700355..2700612))
location: region:2691517-2700612:-1
so has part: feature:2700355-2700612:-1:exon
so has part: feature:2692287-2692433:-1:exon
so has part: feature:2691517-2691579:-1:exon

XP_032835398.1
type: Protein
SIO_000068: ncbiprotein

position:2691517:-1
position: 2691517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2700612:-1
position: 2700612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2700355-2700612:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2692287-2692433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2691517-2691579:-1:exon

LOC116957384
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116957384
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2701642..2774244
location: region:2701642-2774244:1
so has part: feature:2701642-2774244:1:exon
subclass of: SO_0000010

116957384
type: Gene
SIO_000068: ncbigene

position:2701642:1
position: 2701642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2774244:1
position: 2774244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2701642-2774244:1:exon

LOC116957384
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957384
product: X-linked retinitis pigmentosa GTPase regulator-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032979501.1
SIO_010081: LOC116957384
subclass of: SO_0000673
so part of: LOC116957384
location: join(2701642..2701752,2707217..2707336,2709384..2709503,2711358..2711420,2713082..2713249,2719320..2719469,2722454..2722522,2728021..2728107,2733864..2734022,2742717..2742832,2747888..2748034,2758218..2758266,2759928..2760004,2773943..2774244)
location: region:2701642-2774244:1
so has part: feature:2701642-2701752:1:exon
so has part: feature:2707217-2707336:1:exon
so has part: feature:2709384-2709503:1:exon
so has part: feature:2711358-2711420:1:exon
so has part: feature:2713082-2713249:1:exon
so has part: feature:2719320-2719469:1:exon
so has part: feature:2722454-2722522:1:exon
so has part: feature:2728021-2728107:1:exon
so has part: feature:2733864-2734022:1:exon
so has part: feature:2742717-2742832:1:exon
so has part: feature:2747888-2748034:1:exon
so has part: feature:2758218-2758266:1:exon
so has part: feature:2759928-2760004:1:exon
so has part: feature:2773943-2774244:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2701642-2701752:1:exon

position:2701752:1
position: 2701752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2707217-2707336:1:exon

position:2707217:1
position: 2707217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2707336:1
position: 2707336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2709384-2709503:1:exon

position:2709384:1
position: 2709384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2709503:1
position: 2709503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2711358-2711420:1:exon

position:2711358:1
position: 2711358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2711420:1
position: 2711420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2713082-2713249:1:exon

position:2713082:1
position: 2713082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2713249:1
position: 2713249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2719320-2719469:1:exon

position:2719320:1
position: 2719320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2719469:1
position: 2719469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2722454-2722522:1:exon

position:2722454:1
position: 2722454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2722522:1
position: 2722522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2728021-2728107:1:exon

position:2728021:1
position: 2728021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2728107:1
position: 2728107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2733864-2734022:1:exon

position:2733864:1
position: 2733864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2734022:1
position: 2734022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2742717-2742832:1:exon

position:2742717:1
position: 2742717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2742832:1
position: 2742832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2747888-2748034:1:exon

position:2747888:1
position: 2747888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2748034:1
position: 2748034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2758218-2758266:1:exon

position:2758218:1
position: 2758218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2758266:1
position: 2758266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2759928-2760004:1:exon

position:2759928:1
position: 2759928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2760004:1
position: 2760004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2773943-2774244:1:exon

position:2773943:1
position: 2773943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116957384
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957384
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: X-linked retinitis pigmentosa GTPase regulator-like isoform X1
translation: MAASSAAASASAEEEEEASGAGGVCVYVFGNGRVSTPPRFWLRTHSVELVACGEEHAGLLTDTGKLYMFGSHEWGQLGLGTRRHGDTETPRLGVSRPTWVRGVRHHRLTQLACGDKHSLVASDRGVVLVSGSNGERQLGLGSLTLTRTSVFLPVPNLLTTPLTISAVSAGNGTSAILSGDGAVLVWGTNGCGQLGLGSAPHAASPTAPALGGLVRALSCGHRHSAFVSEDGAVWTCGDPEGGRLGRSCDEQGSRVPGRVDVLSEPCRSVSCGGSHTAALTESGSLWLWGQGSRGQLGLGAVVTSTAVPTRAEIPSGGEVHSVGTGAEHTALITGDERLLLFGSGRCGRPGLRDSLNHFRAQPPHGAPTHARTVVCGGCYTLVLARCGGGGGGGGGGGGDGGRVVQVVANAGVDARSRRRQKEGFTLQPPLNVTLTATLLSPQLKRSRKEEDLGHGQANTARTKHQGQTLSGVFDDFIHSKRLELTHVPTPALLFLSHGDHL
SIO_010081: LOC116957384
subclass of: SO_0000673
so part of: LOC116957384
location: join(2701689..2701752,2707217..2707336,2709384..2709503,2711358..2711420,2713082..2713249,2719320..2719469,2722454..2722522,2728021..2728107,2733864..2734022,2742717..2742832,2747888..2748034,2758218..2758266,2759928..2760004,2773943..2774059)
location: region:2701689-2774059:1
so has part: feature:2701689-2701752:1:exon
so has part: feature:2707217-2707336:1:exon
so has part: feature:2709384-2709503:1:exon
so has part: feature:2711358-2711420:1:exon
so has part: feature:2713082-2713249:1:exon
so has part: feature:2719320-2719469:1:exon
so has part: feature:2722454-2722522:1:exon
so has part: feature:2728021-2728107:1:exon
so has part: feature:2733864-2734022:1:exon
so has part: feature:2742717-2742832:1:exon
so has part: feature:2747888-2748034:1:exon
so has part: feature:2758218-2758266:1:exon
so has part: feature:2759928-2760004:1:exon
so has part: feature:2773943-2774059:1:exon

XP_032835392.1
type: Protein
SIO_000068: ncbiprotein

position:2701689:1
position: 2701689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2774059:1
position: 2774059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2701689-2701752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2707217-2707336:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2709384-2709503:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2711358-2711420:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2713082-2713249:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2719320-2719469:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2722454-2722522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2728021-2728107:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2733864-2734022:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2742717-2742832:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2747888-2748034:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2758218-2758266:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2759928-2760004:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2773943-2774059:1:exon

LOC116957384
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957384
product: X-linked retinitis pigmentosa GTPase regulator-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032979503.1
SIO_010081: LOC116957384
subclass of: SO_0000673
so part of: LOC116957384
location: join(2707217..2707336,2709384..2709503,2711358..2711420,2713072..2713249,2719320..2719469,2722454..2722522,2728021..2728107,2733864..2734022,2742717..2742832,2747888..2748034,2758218..2758266,2759928..2760004,2773943..2774244)
location: region:2707217-2774244:1
so has part: feature:2707217-2707336:1:exon
so has part: feature:2709384-2709503:1:exon
so has part: feature:2711358-2711420:1:exon
so has part: feature:2713072-2713249:1:exon
so has part: feature:2719320-2719469:1:exon
so has part: feature:2722454-2722522:1:exon
so has part: feature:2728021-2728107:1:exon
so has part: feature:2733864-2734022:1:exon
so has part: feature:2742717-2742832:1:exon
so has part: feature:2747888-2748034:1:exon
so has part: feature:2758218-2758266:1:exon
so has part: feature:2759928-2760004:1:exon
so has part: feature:2773943-2774244:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2707217-2707336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2709384-2709503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2711358-2711420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2713072-2713249:1:exon

position:2713072:1
position: 2713072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2719320-2719469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2722454-2722522:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2728021-2728107:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2733864-2734022:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2742717-2742832:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2747888-2748034:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2758218-2758266:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2759928-2760004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2773943-2774244:1:exon

LOC116957384
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957384
product: X-linked retinitis pigmentosa GTPase regulator-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032979504.1
SIO_010081: LOC116957384
subclass of: SO_0000673
so part of: LOC116957384
location: join(2707349..2707712,2709384..2709503,2711358..2711420,2713072..2713249,2719320..2719469,2722454..2722522,2728021..2728107,2733864..2734022,2742717..2742832,2747888..2748034,2758218..2758266,2759928..2760004,2773943..2774244)
location: region:2707349-2774244:1
so has part: feature:2707349-2707712:1:exon
so has part: feature:2709384-2709503:1:exon
so has part: feature:2711358-2711420:1:exon
so has part: feature:2713072-2713249:1:exon
so has part: feature:2719320-2719469:1:exon
so has part: feature:2722454-2722522:1:exon
so has part: feature:2728021-2728107:1:exon
so has part: feature:2733864-2734022:1:exon
so has part: feature:2742717-2742832:1:exon
so has part: feature:2747888-2748034:1:exon
so has part: feature:2758218-2758266:1:exon
so has part: feature:2759928-2760004:1:exon
so has part: feature:2773943-2774244:1:exon

position:2707349:1
position: 2707349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2707349-2707712:1:exon

position:2707712:1
position: 2707712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2709384-2709503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2711358-2711420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2713072-2713249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2719320-2719469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2722454-2722522:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2728021-2728107:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2733864-2734022:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2742717-2742832:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2747888-2748034:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2758218-2758266:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2759928-2760004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2773943-2774244:1:exon

LOC116957384
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116957384
product: X-linked retinitis pigmentosa GTPase regulator-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032979502.1
SIO_010081: LOC116957384
subclass of: SO_0000673
so part of: LOC116957384
location: join(2707349..2707712,2709384..2709503,2711358..2711420,2713082..2713249,2719320..2719469,2722454..2722522,2728021..2728107,2733864..2734022,2742717..2742832,2747888..2748034,2758218..2758266,2759928..2760004,2773943..2774244)
location: region:2707349-2774244:1
so has part: feature:2707349-2707712:1:exon
so has part: feature:2709384-2709503:1:exon
so has part: feature:2711358-2711420:1:exon
so has part: feature:2713082-2713249:1:exon
so has part: feature:2719320-2719469:1:exon
so has part: feature:2722454-2722522:1:exon
so has part: feature:2728021-2728107:1:exon
so has part: feature:2733864-2734022:1:exon
so has part: feature:2742717-2742832:1:exon
so has part: feature:2747888-2748034:1:exon
so has part: feature:2758218-2758266:1:exon
so has part: feature:2759928-2760004:1:exon
so has part: feature:2773943-2774244:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2707349-2707712:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2709384-2709503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2711358-2711420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2713082-2713249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2719320-2719469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2722454-2722522:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2728021-2728107:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2733864-2734022:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2742717-2742832:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2747888-2748034:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2758218-2758266:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2759928-2760004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2773943-2774244:1:exon

LOC116957384
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957384
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: X-linked retinitis pigmentosa GTPase regulator-like isoform X2
translation: MFGSHEWGQLGLGTRRHGDTETPRLGVSRPTWVRGVRHHRLTQLACGDKHSLVASDRGVVLVSGSNGERQLGLGSLTLTRTSVFLPVPNLLTTPLTISAVSAGNGTSAILSGDGAVLVWGTNGCGQLGLGSAPHAASPTAPALGGLVRALSCGHRHSAFVSEDGAVWTCGDPEGGRLGRSCDEQGSRVPGRVDVLSEPCRSVSCGGSHTAALTESGSLWLWGQGSRGQLGLGAVVTSTAVPTRAEIPSGGEVHSVGTGAEHTALITGDERLLLFGSGRCGRPGLRDSLNHFRAQPPHGAPTHARTVVCGGCYTLVLARCGGGGGGGGGGGGDGGRVVQVVANAGVDARSRRRQKEGFTLQPPLNVTLTATLLSPQLKRSRKEEDLGHGQANTARTKHQGQTLSGVFDDFIHSKRLELTHVPTPALLFLSHGDHL
SIO_010081: LOC116957384
subclass of: SO_0000673
so part of: LOC116957384
location: join(2709401..2709503,2711358..2711420,2713082..2713249,2719320..2719469,2722454..2722522,2728021..2728107,2733864..2734022,2742717..2742832,2747888..2748034,2758218..2758266,2759928..2760004,2773943..2774059)
location: region:2709401-2774059:1
so has part: feature:2709401-2709503:1:exon
so has part: feature:2711358-2711420:1:exon
so has part: feature:2713082-2713249:1:exon
so has part: feature:2719320-2719469:1:exon
so has part: feature:2722454-2722522:1:exon
so has part: feature:2728021-2728107:1:exon
so has part: feature:2733864-2734022:1:exon
so has part: feature:2742717-2742832:1:exon
so has part: feature:2747888-2748034:1:exon
so has part: feature:2758218-2758266:1:exon
so has part: feature:2759928-2760004:1:exon
so has part: feature:2773943-2774059:1:exon

XP_032835393.1
type: Protein
SIO_000068: ncbiprotein

position:2709401:1
position: 2709401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2709401-2709503:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2711358-2711420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2713082-2713249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2719320-2719469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2722454-2722522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2728021-2728107:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2733864-2734022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2742717-2742832:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2747888-2748034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2758218-2758266:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2759928-2760004:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2773943-2774059:1:exon

LOC116957384
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957384
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: X-linked retinitis pigmentosa GTPase regulator-like isoform X3
translation: MSGDSLAWGHGDTGTRRHRDSGCPGPRGCEECDITDSLSLPAETNTAWSRLSAPDRGVVLVSGSNGERQLGLGSLTLTRTSVFLPVPNLLTTPLTISAVSAGNGTSAILSGDGAVLVWGTNGCGQLGLGSAPHAASPTAPALGGLVRALSCGHRHSAFVSEDGAVWTCGDPEGGRLGRSCDEQGSRVPGRVDVLSEPCRSVSCGGSHTAALTESGSLWLWGQGSRGQLGLGAVVTSTAVPTRAEIPSGGEVHSVGTGAEHTALITGDERLLLFGSGRCGRPGLRDSLNHFRAQPPHGAPTHARTVVCGGCYTLVLARCGGGGGGGGGGGGDGGRVVQVVANAGVDARSRRRQKEGFTLQPPLNVTLTATLLSPQLKRSRKEEDLGHGQANTARTKHQGQTLSGVFDDFIHSKRLELTHVPTPALLFLSHGDHL
SIO_010081: LOC116957384
subclass of: SO_0000673
so part of: LOC116957384
location: join(2709414..2709503,2711358..2711420,2713072..2713249,2719320..2719469,2722454..2722522,2728021..2728107,2733864..2734022,2742717..2742832,2747888..2748034,2758218..2758266,2759928..2760004,2773943..2774059)
location: region:2709414-2774059:1
so has part: feature:2709414-2709503:1:exon
so has part: feature:2711358-2711420:1:exon
so has part: feature:2713072-2713249:1:exon
so has part: feature:2719320-2719469:1:exon
so has part: feature:2722454-2722522:1:exon
so has part: feature:2728021-2728107:1:exon
so has part: feature:2733864-2734022:1:exon
so has part: feature:2742717-2742832:1:exon
so has part: feature:2747888-2748034:1:exon
so has part: feature:2758218-2758266:1:exon
so has part: feature:2759928-2760004:1:exon
so has part: feature:2773943-2774059:1:exon

XP_032835394.1
type: Protein
SIO_000068: ncbiprotein

position:2709414:1
position: 2709414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2709414-2709503:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2711358-2711420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2713072-2713249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2719320-2719469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2722454-2722522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2728021-2728107:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2733864-2734022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2742717-2742832:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2747888-2748034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2758218-2758266:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2759928-2760004:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2773943-2774059:1:exon

LOC116957384
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116957384
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: X-linked retinitis pigmentosa GTPase regulator-like isoform X3
translation: MSGDSLAWGHGDTGTRRHRDSGCPGPRGCEECDITDSLSLPAETNTAWSRLSAPDRGVVLVSGSNGERQLGLGSLTLTRTSVFLPVPNLLTTPLTISAVSAGNGTSAILSGDGAVLVWGTNGCGQLGLGSAPHAASPTAPALGGLVRALSCGHRHSAFVSEDGAVWTCGDPEGGRLGRSCDEQGSRVPGRVDVLSEPCRSVSCGGSHTAALTESGSLWLWGQGSRGQLGLGAVVTSTAVPTRAEIPSGGEVHSVGTGAEHTALITGDERLLLFGSGRCGRPGLRDSLNHFRAQPPHGAPTHARTVVCGGCYTLVLARCGGGGGGGGGGGGDGGRVVQVVANAGVDARSRRRQKEGFTLQPPLNVTLTATLLSPQLKRSRKEEDLGHGQANTARTKHQGQTLSGVFDDFIHSKRLELTHVPTPALLFLSHGDHL
SIO_010081: LOC116957384
subclass of: SO_0000673
so part of: LOC116957384
location: join(2709414..2709503,2711358..2711420,2713072..2713249,2719320..2719469,2722454..2722522,2728021..2728107,2733864..2734022,2742717..2742832,2747888..2748034,2758218..2758266,2759928..2760004,2773943..2774059)
location: region:2709414-2774059:1
so has part: feature:2709414-2709503:1:exon
so has part: feature:2711358-2711420:1:exon
so has part: feature:2713072-2713249:1:exon
so has part: feature:2719320-2719469:1:exon
so has part: feature:2722454-2722522:1:exon
so has part: feature:2728021-2728107:1:exon
so has part: feature:2733864-2734022:1:exon
so has part: feature:2742717-2742832:1:exon
so has part: feature:2747888-2748034:1:exon
so has part: feature:2758218-2758266:1:exon
so has part: feature:2759928-2760004:1:exon
so has part: feature:2773943-2774059:1:exon

XP_032835395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2709414-2709503:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2711358-2711420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2713072-2713249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2719320-2719469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2722454-2722522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2728021-2728107:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2733864-2734022:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2742717-2742832:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2747888-2748034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2758218-2758266:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2759928-2760004:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2773943-2774059:1:exon