Petromyzon marinus isolate kPetMar1 chromosome 38, kPetMar1.pri, whole genome shotgun sequence.
type: Entry
definition: Petromyzon marinus isolate kPetMar1 chromosome 38, kPetMar1.pri, whole genome shotgun sequence.
sequence version: NC_046106.1
sequence date: 2020-03-20
sequence: sequence
division: CON
label: NC_046106.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA611764
dblink: SAMN12629506
keyword: WGS
keyword: RefSeq
source: Petromyzon marinus (sea lamprey)
organism: Petromyzon marinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021478.1.\nAssembly name: kPetMar1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/24. The original whole-genome shotgun project has the\naccession JAAIYE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-DEC-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_dups v. github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n scaff10x v. 4.1.0; Bionano Solve DLS v.\n 3.2.1; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. smrtlink_6.0.0.47841;\n longranger align v. 2.2.2; freebayes\n Illumina polishing v. 1.3.1; gEVAL manual\n curation v. 2019-12-09; VGP assembly\n pipeline individual v. 1.6\nAssembly Name :: kPetMar1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 62.36x\nSequencing Technology :: PacBio Sequel I CLR; llumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Petromyzon marinus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 12490248
topology: linear
so has quality: SO_0000987
location: 1..12490248
location: region:1-12490248:1
RO_0002162: 7757

NC_046106
type: RefSeq
SIO_000068: refseq

PRJNA611764
type: BioProject
SIO_000068: bioproject

SAMN12629506
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12490248:1
position: 12490248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-12490248:1:source
so part of: sequence
organism: Petromyzon marinus
mol type: genomic DNA
isolate: kPetMar1
chromosome: 38
sex: male
tissue type: sperm
dev stage: adult
country: USA: Great Lakes Fisheries Commission
lat lon: 42.2821 N 83.74847 W
collection date: 12-Jun-2018
collected by: Jeremiah Smith

7757
type: Taxonomy
SIO_000068: taxonomy

RUSF1
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: RUSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(944..15899)
location: region:944-15899:-1
so has part: feature:944-15899:-1:exon
subclass of: SO_0000010

116950085
type: Gene
SIO_000068: ncbigene

position:944:-1
position: 944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15899:-1
position: 15899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944-15899:-1:exon

RUSF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: RUSF1
product: RUS family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032967520.1
SIO_010081: RUSF1
subclass of: SO_0000673
so part of: RUSF1
location: complement(join(944..1179,3032..3133,5323..5428,7043..7075,8112..8157,9368..9482,9819..9896,13113..13280,15544..15581))
location: region:944-15581:-1
so has part: feature:15544-15581:-1:exon
so has part: feature:13113-13280:-1:exon
so has part: feature:9819-9896:-1:exon
so has part: feature:9368-9482:-1:exon
so has part: feature:8112-8157:-1:exon
so has part: feature:7043-7075:-1:exon
so has part: feature:5323-5428:-1:exon
so has part: feature:3032-3133:-1:exon
so has part: feature:944-1179:-1:exon

position:15581:-1
position: 15581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15544-15581:-1:exon

position:15544:-1
position: 15544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13113-13280:-1:exon

position:13113:-1
position: 13113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13280:-1
position: 13280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9819-9896:-1:exon

position:9819:-1
position: 9819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9896:-1
position: 9896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9368-9482:-1:exon

position:9368:-1
position: 9368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9482:-1
position: 9482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8112-8157:-1:exon

position:8112:-1
position: 8112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8157:-1
position: 8157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7043-7075:-1:exon

position:7043:-1
position: 7043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7075:-1
position: 7075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5323-5428:-1:exon

position:5323:-1
position: 5323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5428:-1
position: 5428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3032-3133:-1:exon

position:3032:-1
position: 3032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3133:-1
position: 3133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:944-1179:-1:exon

position:1179:-1
position: 1179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RUSF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: RUSF1
product: RUS family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_032967519.1
SIO_010081: RUSF1
subclass of: SO_0000673
so part of: RUSF1
location: complement(join(946..1179,3032..3133,5323..5428,7043..7075,8112..8157,9368..9482,9819..9896,13113..13280,15578..15899))
location: region:946-15899:-1
so has part: feature:15578-15899:-1:exon
so has part: feature:13113-13280:-1:exon
so has part: feature:9819-9896:-1:exon
so has part: feature:9368-9482:-1:exon
so has part: feature:8112-8157:-1:exon
so has part: feature:7043-7075:-1:exon
so has part: feature:5323-5428:-1:exon
so has part: feature:3032-3133:-1:exon
so has part: feature:946-1179:-1:exon

position:946:-1
position: 946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15578-15899:-1:exon

position:15578:-1
position: 15578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13113-13280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9819-9896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9368-9482:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8112-8157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7043-7075:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5323-5428:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3032-3133:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:946-1179:-1:exon

RUSF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: RUSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUS1 family protein C16orf58 homolog
translation: MEEFEVVASERYGSRPERHYSRGPDGALVWRGRGHGQSRGGLLDALTSVFLPQGYPESVSEDYLTYQMWDTLQAFCSSVTGALATQAMLKGVGVGDAAASLAGATVTWLLRSGTGMLGSIVFAWKKGSSLDCDAKKWRLFADVLNDVAIFLEILAPGFPPLFTLVVCVSGVLKSVVGVAGGATRAALTVHQARRDNMADVSAKDGSQETLVNLAALVFSLMLTPLVTNNPT
SIO_010081: RUSF1
subclass of: SO_0000673
so part of: RUSF1
location: complement(join(1105..1179,3032..3133,5323..5428,7043..7075,8112..8157,9368..9482,9819..9896,13113..13253))
location: region:1105-13253:-1
so has part: feature:13113-13253:-1:exon
so has part: feature:9819-9896:-1:exon
so has part: feature:9368-9482:-1:exon
so has part: feature:8112-8157:-1:exon
so has part: feature:7043-7075:-1:exon
so has part: feature:5323-5428:-1:exon
so has part: feature:3032-3133:-1:exon
so has part: feature:1105-1179:-1:exon

XP_032823410.1
type: Protein
SIO_000068: ncbiprotein

position:1105:-1
position: 1105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13253:-1
position: 13253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13113-13253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9819-9896:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9368-9482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8112-8157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7043-7075:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5323-5428:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3032-3133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1105-1179:-1:exon

RUSF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: RUSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUS1 family protein C16orf58 homolog
translation: MEEFEVVASERYGSRPERHYSRGPDGALVWRGRGHGQSRGGLLDALTSVFLPQGYPESVSEDYLTYQMWDTLQAFCSSVTGALATQAMLKGVGVGDAAASLAGATVTWLLRSGTGMLGSIVFAWKKGSSLDCDAKKWRLFADVLNDVAIFLEILAPGFPPLFTLVVCVSGVLKSVVGVAGGATRAALTVHQARRDNMADVSAKDGSQETLVNLAALVFSLMLTPLVTNNPT
SIO_010081: RUSF1
subclass of: SO_0000673
so part of: RUSF1
location: complement(join(1105..1179,3032..3133,5323..5428,7043..7075,8112..8157,9368..9482,9819..9896,13113..13253))
location: region:1105-13253:-1
so has part: feature:13113-13253:-1:exon
so has part: feature:9819-9896:-1:exon
so has part: feature:9368-9482:-1:exon
so has part: feature:8112-8157:-1:exon
so has part: feature:7043-7075:-1:exon
so has part: feature:5323-5428:-1:exon
so has part: feature:3032-3133:-1:exon
so has part: feature:1105-1179:-1:exon

XP_032823411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13113-13253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9819-9896:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9368-9482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8112-8157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7043-7075:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5323-5428:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3032-3133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1105-1179:-1:exon

LOC116950086
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(18689..36328)
location: region:18689-36328:-1
so has part: feature:18689-36328:-1:exon
subclass of: SO_0000010

116950086
type: Gene
SIO_000068: ncbigene

position:18689:-1
position: 18689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36328:-1
position: 36328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18689-36328:-1:exon

LOC116950086
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950086
product: 14-3-3 protein gamma-B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 67 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_032967521.1
SIO_010081: LOC116950086
subclass of: SO_0000673
so part of: LOC116950086
location: complement(join(18689..23673,23940..27851,36177..36328))
location: region:18689-36328:-1
so has part: feature:36177-36328:-1:exon
so has part: feature:23940-27851:-1:exon
so has part: feature:18689-23673:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36177-36328:-1:exon

position:36177:-1
position: 36177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23940-27851:-1:exon

position:23940:-1
position: 23940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27851:-1
position: 27851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18689-23673:-1:exon

position:23673:-1
position: 23673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116950086
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 14-3-3 protein gamma-B
translation: MAEREQLVQRARLAEQAERYDDMAAAMKAVTELTEPLSNEERNLLSVAYKNVVGARRSAWRVISSIEQKTATDGNEKRLGLVRSYREKIEQELEAVCGDVLNLLDNHLIPRCDHPQYESKVFYLKMKGDYFRYLAEVATGEKRDHVVSNSEKAYKEAYEVSKEQMMPTHPIRLGLALNFSVFYYEIQNAPEQACQLAKTAFDEAIAELDSLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDEAGEGN
SIO_010081: LOC116950086
subclass of: SO_0000673
so part of: LOC116950086
location: complement(join(27198..27851,36177..36263))
location: region:27198-36263:-1
so has part: feature:36177-36263:-1:exon
so has part: feature:27198-27851:-1:exon

XP_032823412.1
type: Protein
SIO_000068: ncbiprotein

position:27198:-1
position: 27198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36263:-1
position: 36263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36177-36263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27198-27851:-1:exon

LOC116950087
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(55838..99712)
location: region:55838-99712:-1
so has part: feature:55838-99712:-1:exon
subclass of: SO_0000010

116950087
type: Gene
SIO_000068: ncbigene

position:55838:-1
position: 55838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99712:-1
position: 99712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55838-99712:-1:exon

LOC116950087
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950087
product: paxillin-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_032967524.1
SIO_010081: LOC116950087
subclass of: SO_0000673
so part of: LOC116950087
location: complement(join(55838..60754,61508..61656,62801..62882,63414..63587,64427..64591,65777..66191,67081..67330,67949..68082,70531..70619,71273..71556,99470..99712))
location: region:55838-99712:-1
so has part: feature:99470-99712:-1:exon
so has part: feature:71273-71556:-1:exon
so has part: feature:70531-70619:-1:exon
so has part: feature:67949-68082:-1:exon
so has part: feature:67081-67330:-1:exon
so has part: feature:65777-66191:-1:exon
so has part: feature:64427-64591:-1:exon
so has part: feature:63414-63587:-1:exon
so has part: feature:62801-62882:-1:exon
so has part: feature:61508-61656:-1:exon
so has part: feature:55838-60754:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99470-99712:-1:exon

position:99470:-1
position: 99470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:71273-71556:-1:exon

position:71273:-1
position: 71273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71556:-1
position: 71556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:70531-70619:-1:exon

position:70531:-1
position: 70531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70619:-1
position: 70619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:67949-68082:-1:exon

position:67949:-1
position: 67949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68082:-1
position: 68082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:67081-67330:-1:exon

position:67081:-1
position: 67081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67330:-1
position: 67330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:65777-66191:-1:exon

position:65777:-1
position: 65777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66191:-1
position: 66191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:64427-64591:-1:exon

position:64427:-1
position: 64427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64591:-1
position: 64591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:63414-63587:-1:exon

position:63414:-1
position: 63414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63587:-1
position: 63587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:62801-62882:-1:exon

position:62801:-1
position: 62801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62882:-1
position: 62882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:61508-61656:-1:exon

position:61508:-1
position: 61508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61656:-1
position: 61656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:55838-60754:-1:exon

position:60754:-1
position: 60754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116950087
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950087
product: paxillin-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_032967523.1
SIO_010081: LOC116950087
subclass of: SO_0000673
so part of: LOC116950087
location: complement(join(55838..60754,61508..61656,62801..62882,63414..63587,64427..64591,65777..66191,67081..67330,67949..68082,70531..70619,71273..71556,83194..83244,99470..99712))
location: region:55838-99712:-1
so has part: feature:99470-99712:-1:exon
so has part: feature:83194-83244:-1:exon
so has part: feature:71273-71556:-1:exon
so has part: feature:70531-70619:-1:exon
so has part: feature:67949-68082:-1:exon
so has part: feature:67081-67330:-1:exon
so has part: feature:65777-66191:-1:exon
so has part: feature:64427-64591:-1:exon
so has part: feature:63414-63587:-1:exon
so has part: feature:62801-62882:-1:exon
so has part: feature:61508-61656:-1:exon
so has part: feature:55838-60754:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99470-99712:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83194-83244:-1:exon

position:83194:-1
position: 83194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83244:-1
position: 83244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71273-71556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:70531-70619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67949-68082:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67081-67330:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:65777-66191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:64427-64591:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:63414-63587:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:62801-62882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:61508-61656:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:55838-60754:-1:exon

LOC116950087
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paxillin-like isoform X2
translation: MDDLDALLADLESTTSHLSKRPAFLQEDPYTVPTAYPGDAGAPHAAFGNSHAQRARPGDDVPPPIPPPPSLQALNGGDSDDFHPRPPPPPAYVPSYNNQVADSKGQARPGVPGAPRVVAASGDHEHIYSLPNKPKSAEPSPSYSSSFGLGSNLSELDRILQELNCDQYSLPGNDAVAPTGQVPGGHDADFPRKEGGAAVVFQGGPGGVPLAGGAAGDKGFGPVGAAGGRGVQPQARPSVDNLLSELKGSVPPADAARTAVAAHPVSQPSVKLSAAAGHGTASHAAPSLQQQQQHQQLAQQQQQQQQPAMNMAVGQGGAIQNRLPPGGGGGGGGGAPLLQQQPGGQWEGPAAGAGQPQMLGAPLPQPQQARISASSATRELDELMACLSDFKLQSNIPGQAGGVIQNKGGAQTGDQLDSMLGSLQSDLNRQGVATLAKGQCAACLKPIAGQVVTAMGRTWHPEHFVCTECQEEIGARNFFERDGLPYCEKDYHFLFSPRCAYCSGPILDKVVTALDKTWHPEHFFCVQCGHFFGDEGFHEKDGKPYCRQDYFEMFAPKCGGCSRAIVENYISALSALWHPECFVCRECFTPFINGSFFEHEGQPYCEVHYHERRGSLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCHPCFIKLFG
SIO_010081: LOC116950087
subclass of: SO_0000673
so part of: LOC116950087
location: complement(join(60488..60754,61508..61656,62801..62882,63414..63587,64427..64591,65777..66191,67081..67330,67949..68082,70531..70619,71273..71556,99470..99482))
location: region:60488-99482:-1
so has part: feature:99470-99482:-1:exon
so has part: feature:71273-71556:-1:exon
so has part: feature:70531-70619:-1:exon
so has part: feature:67949-68082:-1:exon
so has part: feature:67081-67330:-1:exon
so has part: feature:65777-66191:-1:exon
so has part: feature:64427-64591:-1:exon
so has part: feature:63414-63587:-1:exon
so has part: feature:62801-62882:-1:exon
so has part: feature:61508-61656:-1:exon
so has part: feature:60488-60754:-1:exon

XP_032823415.1
type: Protein
SIO_000068: ncbiprotein

position:60488:-1
position: 60488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99482:-1
position: 99482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99470-99482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:71273-71556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:70531-70619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67949-68082:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67081-67330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:65777-66191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:64427-64591:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:63414-63587:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:62801-62882:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:61508-61656:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:60488-60754:-1:exon

LOC116950087
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paxillin-like isoform X1
translation: MDDLGEKSEVYSPLSPRVVVFDALLADLESTTSHLSKRPAFLQEDPYTVPTAYPGDAGAPHAAFGNSHAQRARPGDDVPPPIPPPPSLQALNGGDSDDFHPRPPPPPAYVPSYNNQVADSKGQARPGVPGAPRVVAASGDHEHIYSLPNKPKSAEPSPSYSSSFGLGSNLSELDRILQELNCDQYSLPGNDAVAPTGQVPGGHDADFPRKEGGAAVVFQGGPGGVPLAGGAAGDKGFGPVGAAGGRGVQPQARPSVDNLLSELKGSVPPADAARTAVAAHPVSQPSVKLSAAAGHGTASHAAPSLQQQQQHQQLAQQQQQQQQPAMNMAVGQGGAIQNRLPPGGGGGGGGGAPLLQQQPGGQWEGPAAGAGQPQMLGAPLPQPQQARISASSATRELDELMACLSDFKLQSNIPGQAGGVIQNKGGAQTGDQLDSMLGSLQSDLNRQGVATLAKGQCAACLKPIAGQVVTAMGRTWHPEHFVCTECQEEIGARNFFERDGLPYCEKDYHFLFSPRCAYCSGPILDKVVTALDKTWHPEHFFCVQCGHFFGDEGFHEKDGKPYCRQDYFEMFAPKCGGCSRAIVENYISALSALWHPECFVCRECFTPFINGSFFEHEGQPYCEVHYHERRGSLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCHPCFIKLFG
SIO_010081: LOC116950087
subclass of: SO_0000673
so part of: LOC116950087
location: complement(join(60488..60754,61508..61656,62801..62882,63414..63587,64427..64591,65777..66191,67081..67330,67949..68082,70531..70619,71273..71556,83194..83244,99470..99482))
location: region:60488-99482:-1
so has part: feature:99470-99482:-1:exon
so has part: feature:83194-83244:-1:exon
so has part: feature:71273-71556:-1:exon
so has part: feature:70531-70619:-1:exon
so has part: feature:67949-68082:-1:exon
so has part: feature:67081-67330:-1:exon
so has part: feature:65777-66191:-1:exon
so has part: feature:64427-64591:-1:exon
so has part: feature:63414-63587:-1:exon
so has part: feature:62801-62882:-1:exon
so has part: feature:61508-61656:-1:exon
so has part: feature:60488-60754:-1:exon

XP_032823414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99470-99482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83194-83244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71273-71556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:70531-70619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67949-68082:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67081-67330:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:65777-66191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:64427-64591:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:63414-63587:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:62801-62882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:61508-61656:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:60488-60754:-1:exon

LOC116950304
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(105213..126178)
location: region:105213-126178:-1
so has part: feature:105213-126178:-1:exon
subclass of: SO_0000010

116950304
type: Gene
SIO_000068: ncbigene

position:105213:-1
position: 105213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126178:-1
position: 126178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105213-126178:-1:exon

LOC116950304
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950304
product: uncharacterized LOC116950304
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032968026.1
SIO_010081: LOC116950304
subclass of: SO_0000673
so part of: LOC116950304
location: complement(join(105213..105786,107498..107589,109892..110012,110531..110655,111252..111387,112293..113299,114087..114290,114945..115011,115651..115860,116463..116707,117356..117769,119910..120019,120941..121094,121604..121660,122305..122376,122986..123105,124405..124635,125651..125757,126095..126178))
location: region:105213-126178:-1
so has part: feature:126095-126178:-1:exon
so has part: feature:125651-125757:-1:exon
so has part: feature:124405-124635:-1:exon
so has part: feature:122986-123105:-1:exon
so has part: feature:122305-122376:-1:exon
so has part: feature:121604-121660:-1:exon
so has part: feature:120941-121094:-1:exon
so has part: feature:119910-120019:-1:exon
so has part: feature:117356-117769:-1:exon
so has part: feature:116463-116707:-1:exon
so has part: feature:115651-115860:-1:exon
so has part: feature:114945-115011:-1:exon
so has part: feature:114087-114290:-1:exon
so has part: feature:112293-113299:-1:exon
so has part: feature:111252-111387:-1:exon
so has part: feature:110531-110655:-1:exon
so has part: feature:109892-110012:-1:exon
so has part: feature:107498-107589:-1:exon
so has part: feature:105213-105786:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126095-126178:-1:exon

position:126095:-1
position: 126095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:125651-125757:-1:exon

position:125651:-1
position: 125651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125757:-1
position: 125757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:124405-124635:-1:exon

position:124405:-1
position: 124405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124635:-1
position: 124635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:122986-123105:-1:exon

position:122986:-1
position: 122986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123105:-1
position: 123105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:122305-122376:-1:exon

position:122305:-1
position: 122305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122376:-1
position: 122376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:121604-121660:-1:exon

position:121604:-1
position: 121604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121660:-1
position: 121660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:120941-121094:-1:exon

position:120941:-1
position: 120941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121094:-1
position: 121094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:119910-120019:-1:exon

position:119910:-1
position: 119910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120019:-1
position: 120019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:117356-117769:-1:exon

position:117356:-1
position: 117356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117769:-1
position: 117769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:116463-116707:-1:exon

position:116463:-1
position: 116463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116707:-1
position: 116707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:115651-115860:-1:exon

position:115651:-1
position: 115651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115860:-1
position: 115860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:114945-115011:-1:exon

position:114945:-1
position: 114945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115011:-1
position: 115011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:114087-114290:-1:exon

position:114087:-1
position: 114087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114290:-1
position: 114290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:112293-113299:-1:exon

position:112293:-1
position: 112293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113299:-1
position: 113299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:111252-111387:-1:exon

position:111252:-1
position: 111252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111387:-1
position: 111387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:110531-110655:-1:exon

position:110531:-1
position: 110531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110655:-1
position: 110655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:109892-110012:-1:exon

position:109892:-1
position: 109892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110012:-1
position: 110012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:107498-107589:-1:exon

position:107498:-1
position: 107498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107589:-1
position: 107589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:105213-105786:-1:exon

position:105786:-1
position: 105786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116950304
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116950304
translation: MPDVARMEMHPTRGLVVHAISVEVTKGMSRLISSHKSRKRGRPRQAERARCVSAPLPSWLRVMLGSVLHAHPSGLAVADLPDAFMRRTGIFLNWQSLGYDSLEAMLAYTTDIVAMETLPTGRVVLRSAADASRGAPKGRGQSTQPMQSTQSTQSTQSTQSTPSPQQQGSGQVRATPASRSSPGTLEPRLRVRIHKMVSESRDGILASQLPSKFKAAYGSELPMVRLGFTSACALVSALGVAFDLAPTPNGDFVVRIAEHPRRHPKKDSAAAEASRQVPHVTKGIHRSSSCFQNPSQLPACREERAHTANGRAPSARPLRASNGCVATHAAPSTAAVSPAPLSTAAQYSAPQSTAAHSYTPMSTAAHSSAPMSTAAHYFAPVSTAAHYSAPVSTAAHYSAPLSTAAHSSTPLSTAAQYSAPVSTAAQYSAPVSTAAHYSAPSCARTSTAAPSPTPRSPAAPCPAWPVDGVGPGLRFRRHAVVAREYSMCPLYVSYMDSPGQFFVQNYGMDTSEALEDLVLEMKRLYASPDTGALYALPAAMALEGQACAAFSDDEWERSVLLGPPGADGTVPVYYVDYGQMGAVPLHHLRLLPCAFFSLPAQAVPARLACVAPAEGSWCTTSRRLFLQLCHDRVLMAIVCSTRHDVLSLCLCDTMQSEDLHFNDLFVSLGLALAVHPKNDCYQGLSDDHPYWRYLQAASDRAGPEETVPYWVGSRPPPPPPTSPPLPPTSPPPTSTPRAPIAGAASAPVLWDRWDDGLIGAPVSLDRPVAPLPSGAIGGHGTVAVSPFGHSEISPPSPITTTIATTDPPRSPVFPSERNYRLPASAPGFKNSTAVSALSFTSSHASAPASTPCGGGGGDGGGSSGSSGQGAPAAPGFTETCARLAAFIACNGPGLCSRRSFGPPPAARPPGRDDHQAVLRPGTEEPVGSLATVGQPPTTAVALYDGARVPPTTAPSSSSLTAATALPQSSSDKSKAAWLAVTAESIGPHAAAPPPPPPPSGGPAAHADAPRSTPFKVKRVELGGTCHVHVVFWKSRSFCIESEVSSVLFPDRTVPISQLGDCQSPHAAVLALPRSSWPGLFEELASRGVAGVAPETSAVALYPVVDVCSLLWRLGHRQWLSYCHLLQSAVTAEPYPEATVQAVHPAAPDSTDDSNDSDVEAEMALMEQHTEYLQLKWSLEDTWKLSPV
SIO_010081: LOC116950304
subclass of: SO_0000673
so part of: LOC116950304
location: complement(join(105750..105786,107498..107589,109892..110012,110531..110655,111252..111387,112293..113299,114087..114290,114945..115011,115651..115860,116463..116707,117356..117769,119910..120019,120941..121094,121604..121660,122305..122376,122986..123105,124405..124635,125651..125757,126095..126149))
location: region:105750-126149:-1
so has part: feature:126095-126149:-1:exon
so has part: feature:125651-125757:-1:exon
so has part: feature:124405-124635:-1:exon
so has part: feature:122986-123105:-1:exon
so has part: feature:122305-122376:-1:exon
so has part: feature:121604-121660:-1:exon
so has part: feature:120941-121094:-1:exon
so has part: feature:119910-120019:-1:exon
so has part: feature:117356-117769:-1:exon
so has part: feature:116463-116707:-1:exon
so has part: feature:115651-115860:-1:exon
so has part: feature:114945-115011:-1:exon
so has part: feature:114087-114290:-1:exon
so has part: feature:112293-113299:-1:exon
so has part: feature:111252-111387:-1:exon
so has part: feature:110531-110655:-1:exon
so has part: feature:109892-110012:-1:exon
so has part: feature:107498-107589:-1:exon
so has part: feature:105750-105786:-1:exon

XP_032823917.1
type: Protein
SIO_000068: ncbiprotein

position:105750:-1
position: 105750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126149:-1
position: 126149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126095-126149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:125651-125757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:124405-124635:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122986-123105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122305-122376:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:121604-121660:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:120941-121094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:119910-120019:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:117356-117769:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:116463-116707:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:115651-115860:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:114945-115011:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:114087-114290:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:112293-113299:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:111252-111387:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:110531-110655:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:109892-110012:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:107498-107589:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:105750-105786:-1:exon

ARMC5
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: ARMC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(137268..153041)
location: region:137268-153041:-1
so has part: feature:137268-153041:-1:exon
subclass of: SO_0000010

116950088
type: Gene
SIO_000068: ncbigene

position:137268:-1
position: 137268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153041:-1
position: 153041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137268-153041:-1:exon

ARMC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: ARMC5
product: armadillo repeat containing 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032967525.1
SIO_010081: ARMC5
subclass of: SO_0000673
so part of: ARMC5
location: complement(join(137268..140462,142465..142597,144652..145844,147468..147852,148303..148737,149918..150025,152528..152558,152746..153041))
location: region:137268-153041:-1
so has part: feature:152746-153041:-1:exon
so has part: feature:152528-152558:-1:exon
so has part: feature:149918-150025:-1:exon
so has part: feature:148303-148737:-1:exon
so has part: feature:147468-147852:-1:exon
so has part: feature:144652-145844:-1:exon
so has part: feature:142465-142597:-1:exon
so has part: feature:137268-140462:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:152746-153041:-1:exon

position:152746:-1
position: 152746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:152528-152558:-1:exon

position:152528:-1
position: 152528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152558:-1
position: 152558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:149918-150025:-1:exon

position:149918:-1
position: 149918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150025:-1
position: 150025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:148303-148737:-1:exon

position:148303:-1
position: 148303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148737:-1
position: 148737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:147468-147852:-1:exon

position:147468:-1
position: 147468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147852:-1
position: 147852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:144652-145844:-1:exon

position:144652:-1
position: 144652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145844:-1
position: 145844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:142465-142597:-1:exon

position:142465:-1
position: 142465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142597:-1
position: 142597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:137268-140462:-1:exon

position:140462:-1
position: 140462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARMC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: ARMC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 5
translation: MADSSRTHGPGLKFCVAQLQSGCATAVVNALVTIRTKFIKERGGIEKFRLHGGLRPLVALIQKPNVKIVDISLSIIANCCTESEARKEVRRLGGLPPIVLVLKSVTVESIQNRAARALANLAQDKQNSEILHKAGTVSHLKALLESGRDDECLQSAVRAVRNLADSPSHRAAMVSQGVVEPLAQLLKRGDRSGVVGASARALAELSRQCSTECAEVLSRVDAPSTLVALVCGGDAAVRADAMQTLSSLCSQAIVRPTLGSAGAIRCFVDEIRSARNSGGVLNVVRALCLCCREAVNRAKVVESGGIELLFSLLKDSHFKASHDRIILAFLSFFYEESALDVLLGYGLVPILVRRLEEWTLVSDKFQATAVVADIEDERYAASYDFPTEFNRKPDMEPNAESSSFLSMRSWLLTQGYIVSPGDISPRWCPDGSTGDTELEDLEAVPRCSSLVTLHSSVTDAEAVEEPGSPRVARRSGGDVDRACADAKRAKLDDDDEDDGRTATGAHAGRSSEVENSGGARQQTLPARRRKRLLTHPQDQRRSPQASSTRLHFRLLKFCQNARSEATSVKLKKEACLSSSSSSSSPALRASDLASGEANRSAATKRKENDARRHDLPTPRKAPAQGAATTTTTAVAAAAAAATAATDKNSIADGKATASGAAGPSGAASQPEQGHGSETERAVGPDFAILWLLSRFSMYVDPSFLVTTAVLRGLLNYVLGAARPSPRAARILLRLAANPNCLEAFVRTHGISTLHLRLCHGLCPDGEVEWARGDLSAGEGSAGGGVESLVQRTANLKLTTASNRELAWGMLRSLRIQAESGFGTGTLNHLLLSTRQGDKAACALALLYLCRNEPLRRRLLVDQCGLQLLVSHMLRSPDPSYVVRATGALLEFCSLEGKSGTPSSSPPPHHPPPGKFTSGKWRKPPGSEGGVASASSKPSGAPPRDGTSSCGYARCVADDAAADVKFVLDCGAKVSAQRKQLVSRSEVFGAMLQGHYSEAQQSCVAVRNASDAAFTLLMHHLHGCCPPACWALRAAYSPDCVTPPAGEGAAVESADPGPAGSGERRGKPGGSLAGSLLGELMALSNQFLLPDLKRELTAVVRSRCLHAESLPAVYAFAERHCFGELCRQCLEFLLTAPLTIAQRSRGFWELSQVQCNGSEMEATLHSVLLSFI
SIO_010081: ARMC5
subclass of: SO_0000673
so part of: ARMC5
location: complement(join(139496..140462,142465..142597,144652..145844,147468..147852,148303..148737,149918..150025,152528..152558,152746..153009))
location: region:139496-153009:-1
so has part: feature:152746-153009:-1:exon
so has part: feature:152528-152558:-1:exon
so has part: feature:149918-150025:-1:exon
so has part: feature:148303-148737:-1:exon
so has part: feature:147468-147852:-1:exon
so has part: feature:144652-145844:-1:exon
so has part: feature:142465-142597:-1:exon
so has part: feature:139496-140462:-1:exon

XP_032823416.1
type: Protein
SIO_000068: ncbiprotein

position:139496:-1
position: 139496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153009:-1
position: 153009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152746-153009:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152528-152558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:149918-150025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148303-148737:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147468-147852:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:144652-145844:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:142465-142597:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:139496-140462:-1:exon

LOC116950305
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950305
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 156424..182282
location: region:156424-182282:1
so has part: feature:156424-182282:1:exon
subclass of: SO_0000010

116950305
type: Gene
SIO_000068: ncbigene

position:156424:1
position: 156424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182282:1
position: 182282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156424-182282:1:exon

LOC116950305
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950305
product: TRAF-type zinc finger domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032968027.1
SIO_010081: LOC116950305
subclass of: SO_0000673
so part of: LOC116950305
location: join(156424..156755,164956..165495,167312..167447,168909..168962,169766..170087,170965..171079,171121..171235,172019..172210,174601..174694,175566..175610,176117..176152,176981..177010,180105..180140,181931..182282)
location: region:156424-182282:1
so has part: feature:156424-156755:1:exon
so has part: feature:164956-165495:1:exon
so has part: feature:167312-167447:1:exon
so has part: feature:168909-168962:1:exon
so has part: feature:169766-170087:1:exon
so has part: feature:170965-171079:1:exon
so has part: feature:171121-171235:1:exon
so has part: feature:172019-172210:1:exon
so has part: feature:174601-174694:1:exon
so has part: feature:175566-175610:1:exon
so has part: feature:176117-176152:1:exon
so has part: feature:176981-177010:1:exon
so has part: feature:180105-180140:1:exon
so has part: feature:181931-182282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156424-156755:1:exon

position:156755:1
position: 156755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:164956-165495:1:exon

position:164956:1
position: 164956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165495:1
position: 165495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:167312-167447:1:exon

position:167312:1
position: 167312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167447:1
position: 167447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:168909-168962:1:exon

position:168909:1
position: 168909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168962:1
position: 168962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:169766-170087:1:exon

position:169766:1
position: 169766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170087:1
position: 170087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:170965-171079:1:exon

position:170965:1
position: 170965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171079:1
position: 171079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:171121-171235:1:exon

position:171121:1
position: 171121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171235:1
position: 171235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:172019-172210:1:exon

position:172019:1
position: 172019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172210:1
position: 172210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:174601-174694:1:exon

position:174601:1
position: 174601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174694:1
position: 174694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:175566-175610:1:exon

position:175566:1
position: 175566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175610:1
position: 175610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:176117-176152:1:exon

position:176117:1
position: 176117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176152:1
position: 176152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:176981-177010:1:exon

position:176981:1
position: 176981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177010:1
position: 177010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:180105-180140:1:exon

position:180105:1
position: 180105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180140:1
position: 180140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:181931-182282:1:exon

position:181931:1
position: 181931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116950305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950305
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TRAF-type zinc finger domain-containing protein 1-like
translation: MRGGKPRRAFRRKKRRKSFRGTAGDRRRGGIRKRCRQRRTEPPLLQPPQGRIPRGGPSPAPAPGTGGADATKPCGNCRHLIAVSNLSLHETHCFRNLLVCKRCDERVPRAEMEEHVQSEHTEVRCKCGKALEKCKLEDHLVHECPRQAAVCRYCGLEQPRATTREHEDFCGARTERCDACLVYVQKQDDEVHRVTCPGHPVAPDPAGTATVTEAANAALAAAMSALHDDPEVMAEYKKYLELLDSDDDEEEGSPASGSSFASSLWETAAQLTTAALLSSMQGGGGAGGRRGGEEDTQILEDDQELLPCEFCFKPVPAHELVLHQSGCNPTVAHGRVRYLNGVPTSGPPPPPPPPPAAATAAAAQPLDEQLPCQYCYEPVTASLLQAHQDRCLKEQASAFARLCNQQPALAPNKEEPEPLDIGVAAGAATPVADEEMTEMAPSSSSADAAETSVSPEDVKEMETSAPLEDPGSAF
SIO_010081: LOC116950305
subclass of: SO_0000673
so part of: LOC116950305
location: join(165266..165495,167312..167447,168909..168962,169766..170087,170965..171079,171121..171235,172019..172210,174601..174694,175566..175610,176117..176152,176981..177010,180105..180140,181931..181950)
location: region:165266-181950:1
so has part: feature:165266-165495:1:exon
so has part: feature:167312-167447:1:exon
so has part: feature:168909-168962:1:exon
so has part: feature:169766-170087:1:exon
so has part: feature:170965-171079:1:exon
so has part: feature:171121-171235:1:exon
so has part: feature:172019-172210:1:exon
so has part: feature:174601-174694:1:exon
so has part: feature:175566-175610:1:exon
so has part: feature:176117-176152:1:exon
so has part: feature:176981-177010:1:exon
so has part: feature:180105-180140:1:exon
so has part: feature:181931-181950:1:exon

XP_032823918.1
type: Protein
SIO_000068: ncbiprotein

position:165266:1
position: 165266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181950:1
position: 181950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165266-165495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167312-167447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168909-168962:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:169766-170087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170965-171079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171121-171235:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:172019-172210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:174601-174694:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:175566-175610:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:176117-176152:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:176981-177010:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:180105-180140:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:181931-181950:1:exon

BRIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: BRIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 192583..227543
location: region:192583-227543:1
so has part: feature:192583-227543:1:exon
subclass of: SO_0000010

116950089
type: Gene
SIO_000068: ncbigene

position:192583:1
position: 192583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227543:1
position: 227543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192583-227543:1:exon

BRIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: BRIP1
product: BRCA1 interacting protein C-terminal helicase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032967526.1
SIO_010081: BRIP1
subclass of: SO_0000673
so part of: BRIP1
location: join(192583..192819,197098..197159,198441..198538,198905..199016,199828..200172,200953..201077,201685..201855,202557..202868,203213..203431,203813..204012,204936..205068,206866..207029,210884..211052,212461..212601,213265..213426,222289..222448,224258..224379,226346..226541,226694..227543)
location: region:192583-227543:1
so has part: feature:192583-192819:1:exon
so has part: feature:197098-197159:1:exon
so has part: feature:198441-198538:1:exon
so has part: feature:198905-199016:1:exon
so has part: feature:199828-200172:1:exon
so has part: feature:200953-201077:1:exon
so has part: feature:201685-201855:1:exon
so has part: feature:202557-202868:1:exon
so has part: feature:203213-203431:1:exon
so has part: feature:203813-204012:1:exon
so has part: feature:204936-205068:1:exon
so has part: feature:206866-207029:1:exon
so has part: feature:210884-211052:1:exon
so has part: feature:212461-212601:1:exon
so has part: feature:213265-213426:1:exon
so has part: feature:222289-222448:1:exon
so has part: feature:224258-224379:1:exon
so has part: feature:226346-226541:1:exon
so has part: feature:226694-227543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:192583-192819:1:exon

position:192819:1
position: 192819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197098-197159:1:exon

position:197098:1
position: 197098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197159:1
position: 197159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:198441-198538:1:exon

position:198441:1
position: 198441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198538:1
position: 198538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:198905-199016:1:exon

position:198905:1
position: 198905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199016:1
position: 199016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:199828-200172:1:exon

position:199828:1
position: 199828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200172:1
position: 200172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:200953-201077:1:exon

position:200953:1
position: 200953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201077:1
position: 201077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:201685-201855:1:exon

position:201685:1
position: 201685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201855:1
position: 201855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:202557-202868:1:exon

position:202557:1
position: 202557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202868:1
position: 202868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:203213-203431:1:exon

position:203213:1
position: 203213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203431:1
position: 203431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:203813-204012:1:exon

position:203813:1
position: 203813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204012:1
position: 204012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:204936-205068:1:exon

position:204936:1
position: 204936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205068:1
position: 205068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:206866-207029:1:exon

position:206866:1
position: 206866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207029:1
position: 207029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:210884-211052:1:exon

position:210884:1
position: 210884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211052:1
position: 211052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:212461-212601:1:exon

position:212461:1
position: 212461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212601:1
position: 212601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:213265-213426:1:exon

position:213265:1
position: 213265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213426:1
position: 213426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:222289-222448:1:exon

position:222289:1
position: 222289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222448:1
position: 222448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:224258-224379:1:exon

position:224258:1
position: 224258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224379:1
position: 224379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:226346-226541:1:exon

position:226346:1
position: 226346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226541:1
position: 226541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:226694-227543:1:exon

position:226694:1
position: 226694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: BRIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia group J protein
translation: MISPEGSVPKARWDSQAKPQAVAMAANVYTIGGTRVEFPCVPYPSQVSLMNAIMSGLNGKEHCLLESPTGSGKSLALLCSTLAWQKHQYEKLANGDSEKAPGEDKSCKGSAPPQTPAPCGGGPCDCSCHSAPGAQAGAAPSAAPSAAPSAAEAEPGSRSPYFGTSCRAREAALPGNGGSPVSSTLTPPVTPAVGSPLASPYFLSAAPGMSRPGKRGSPADGGDKGDDDDFQVEKRRNRTPHGKALVMKRGIPKGVHYEDDSGGVSDDGAGGAGDKAGGVGRPRPLVTLKQNGQIPAWSPVGNAPCGAACCGCGSPGAPAGAPGSSGRCGGPEGGGVVRRPTRPPKIFFGTRTHRQITQVARELRRTAYAGVRMTVLSSREHTCVHPVVAALPHGRNEACRELLDNKDGATCLFFRNVYKLGCQAALPSLGLASAWDVEDLVRAGRRVGACPYFSARELMEEADIVFCPYNYLIDPQIRQSMEISVRDQVVVLDEAHNMEDAAREAASASVPQGALRRARDEAGSLAAAGVRPDEHTRLQAVCISLDRWMTQSTHLLKHHDFEMDCLKLSGREMLEVLHAWGVTAHTFPELKRSLARVLEKEETVAGRGRDGGRAVSVAMPVVSAPSQVLLAALFLVLDFMFRDGSRFVEDYRVVLMRTLAWGAPDPDVPDAAGFIARPRPGSRARHKRQLLTVHFWCQNPAVAFSDLSAHARTIILTSGTLSPMASFSSELGVSFTIQREATHVINPSQVWVGTVGLGPSGRELCATYCHTETFAFQDELGELLLSVCRTVPRGVLCFLPSYKMLQKVSERWQSTGLWAGLEQRKLVMSEPQRGERAEFDRLLEEYYAAVHTEGQRDGALLLAVCRGKVSEGLDFADDNARVVLTVGIPYPNTRGLQVKLKRDYNDLHVRSRGLLSGSRWYEVQAFRALNQALGRCIRHRHDWGALLLVDARFGKNPAKYTEGLSKWLRQQVRHYADFASGLRSLSAFTEACRATLSPADPAGPVAAGPSPGQPAAAIEPAAPPPGHGAAFDRGTAGLGRAGVAHDAGGGRATPARDPPPATPAPALDIAGGRRQRGRQRHWRGREARHRGFASIARFLSPPGGPGGAGVGAERREATPAPWPPGSRHGLPVEGGDAVAAETGGGPRGHRRHRHYRRRYRRHYRRPRRVRRPRRRRRRRARPCRYRRRHRGAAVPGRRRRRRRRRRPSLLHPGAV
SIO_010081: BRIP1
subclass of: SO_0000673
so part of: BRIP1
location: join(197102..197159,198441..198538,198905..199016,199828..200172,200953..201077,201685..201855,202557..202868,203213..203431,203813..204012,204936..205068,206866..207029,210884..211052,212461..212601,213265..213426,222289..222448,224258..224379,226346..226541,226694..227454)
location: region:197102-227454:1
so has part: feature:197102-197159:1:exon
so has part: feature:198441-198538:1:exon
so has part: feature:198905-199016:1:exon
so has part: feature:199828-200172:1:exon
so has part: feature:200953-201077:1:exon
so has part: feature:201685-201855:1:exon
so has part: feature:202557-202868:1:exon
so has part: feature:203213-203431:1:exon
so has part: feature:203813-204012:1:exon
so has part: feature:204936-205068:1:exon
so has part: feature:206866-207029:1:exon
so has part: feature:210884-211052:1:exon
so has part: feature:212461-212601:1:exon
so has part: feature:213265-213426:1:exon
so has part: feature:222289-222448:1:exon
so has part: feature:224258-224379:1:exon
so has part: feature:226346-226541:1:exon
so has part: feature:226694-227454:1:exon

XP_032823417.1
type: Protein
SIO_000068: ncbiprotein

position:197102:1
position: 197102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227454:1
position: 227454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197102-197159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198441-198538:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:198905-199016:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:199828-200172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200953-201077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:201685-201855:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:202557-202868:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203213-203431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:203813-204012:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:204936-205068:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:206866-207029:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:210884-211052:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:212461-212601:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:213265-213426:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:222289-222448:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:224258-224379:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:226346-226541:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:226694-227454:1:exon

TBX4
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TBX4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(276626..295324)
location: region:276626-295324:-1
so has part: feature:276626-295324:-1:exon
subclass of: SO_0000010

116950306
type: Gene
SIO_000068: ncbigene

position:276626:-1
position: 276626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295324:-1
position: 295324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276626-295324:-1:exon

TBX4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TBX4
product: T-box transcription factor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032968028.1
SIO_010081: TBX4
subclass of: SO_0000673
so part of: TBX4
location: complement(join(276626..277118,277221..277536,278164..278330,279437..279528,285458..285610,287134..287281,288011..288130,293375..293472,295058..295324))
location: region:276626-295324:-1
so has part: feature:295058-295324:-1:exon
so has part: feature:293375-293472:-1:exon
so has part: feature:288011-288130:-1:exon
so has part: feature:287134-287281:-1:exon
so has part: feature:285458-285610:-1:exon
so has part: feature:279437-279528:-1:exon
so has part: feature:278164-278330:-1:exon
so has part: feature:277221-277536:-1:exon
so has part: feature:276626-277118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295058-295324:-1:exon

position:295058:-1
position: 295058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:293375-293472:-1:exon

position:293375:-1
position: 293375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293472:-1
position: 293472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:288011-288130:-1:exon

position:288011:-1
position: 288011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288130:-1
position: 288130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:287134-287281:-1:exon

position:287134:-1
position: 287134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287281:-1
position: 287281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:285458-285610:-1:exon

position:285458:-1
position: 285458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285610:-1
position: 285610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:279437-279528:-1:exon

position:279437:-1
position: 279437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279528:-1
position: 279528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:278164-278330:-1:exon

position:278164:-1
position: 278164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278330:-1
position: 278330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:277221-277536:-1:exon

position:277221:-1
position: 277221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277536:-1
position: 277536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:276626-277118:-1:exon

position:277118:-1
position: 277118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TBX4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TBX4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-box transcription factor TBX4
translation: MSDELGPGPRSPASPPEPPPPASPGHSPAPTPQQGGLEGARVHLHEKELWARFHDAGTEMIITKAGRRMFPGLKVRVSGLSPRTKYILLMDVCPADGHRYKFADNKWSVSGKAEAAMPGRLYVHPDSPAPGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHVVRADEANGFGSGRTAFSTHAFPETAFIAVTSYQNHRITQLKIENNPFAKGFRGGDELELQRVARLHSKECPVLPRSVLRPGIPRDPLVSHVVNSGFHGDERTLVPPIDGGGGGVYFTEAIPRGDCTYRAAGGRKRGGPQRGGGSGGNGNGGLPATPGHGGLLGQHPACFPCEPVQARHACMYATAAAAAAAAELAPAVGPLAPPEMSAYVREGDDGDRSHGRPTSDGLGWTPGGVGGENAQSAAAGGLHHPEWIPVATGTPCEAAYRGCGVGVDAVPASVYRRWDAATAAAAAFAQAWGNGGSGPACGGPQQYGQQQQQQQAAGEGLASMMFQDDEQCQGLGHEASPWAAGLVGSPFGSGLPLAAAAPGLGSPHDGADVGLFLQQNARSLK
SIO_010081: TBX4
subclass of: SO_0000673
so part of: TBX4
location: complement(join(276626..277118,277221..277536,278164..278330,279437..279528,285458..285610,287134..287281,288011..288130,293375..293472,295058..295159))
location: region:276626-295159:-1
so has part: feature:295058-295159:-1:exon
so has part: feature:293375-293472:-1:exon
so has part: feature:288011-288130:-1:exon
so has part: feature:287134-287281:-1:exon
so has part: feature:285458-285610:-1:exon
so has part: feature:279437-279528:-1:exon
so has part: feature:278164-278330:-1:exon
so has part: feature:277221-277536:-1:exon
so has part: feature:276626-277118:-1:exon

XP_032823919.1
type: Protein
SIO_000068: ncbiprotein

position:295159:-1
position: 295159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295058-295159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293375-293472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288011-288130:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:287134-287281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285458-285610:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279437-279528:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:278164-278330:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:277221-277536:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276626-277118:-1:exon

TBX2
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TBX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(431937..616131)
location: region:431937-616131:-1
so has part: feature:431937-616131:-1:exon
subclass of: SO_0000010

116950090
type: Gene
SIO_000068: ncbigene

position:431937:-1
position: 431937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616131:-1
position: 616131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431937-616131:-1:exon

TBX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TBX2
product: T-box transcription factor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032967529.1
SIO_010081: TBX2
subclass of: SO_0000673
so part of: TBX2
location: complement(join(431937..434224,434876..435294,448500..448672,452072..452148,460916..461062,528834..529101,614948..616131))
location: region:431937-616131:-1
so has part: feature:614948-616131:-1:exon
so has part: feature:528834-529101:-1:exon
so has part: feature:460916-461062:-1:exon
so has part: feature:452072-452148:-1:exon
so has part: feature:448500-448672:-1:exon
so has part: feature:434876-435294:-1:exon
so has part: feature:431937-434224:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:614948-616131:-1:exon

position:614948:-1
position: 614948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:528834-529101:-1:exon

position:528834:-1
position: 528834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529101:-1
position: 529101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:460916-461062:-1:exon

position:460916:-1
position: 460916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461062:-1
position: 461062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:452072-452148:-1:exon

position:452072:-1
position: 452072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452148:-1
position: 452148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:448500-448672:-1:exon

position:448500:-1
position: 448500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448672:-1
position: 448672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:434876-435294:-1:exon

position:434876:-1
position: 434876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435294:-1
position: 435294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:431937-434224:-1:exon

position:434224:-1
position: 434224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TBX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TBX2
product: T-box transcription factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032967528.1
SIO_010081: TBX2
subclass of: SO_0000673
so part of: TBX2
location: complement(join(431937..434224,434876..435291,448500..448675,452072..452148,460916..461062,528834..529101,614948..616131))
location: region:431937-616131:-1
so has part: feature:614948-616131:-1:exon
so has part: feature:528834-529101:-1:exon
so has part: feature:460916-461062:-1:exon
so has part: feature:452072-452148:-1:exon
so has part: feature:448500-448675:-1:exon
so has part: feature:434876-435291:-1:exon
so has part: feature:431937-434224:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:614948-616131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528834-529101:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460916-461062:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:452072-452148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:448500-448675:-1:exon

position:448675:-1
position: 448675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:434876-435291:-1:exon

position:435291:-1
position: 435291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:431937-434224:-1:exon

TBX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TBX2
product: T-box transcription factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032967527.1
SIO_010081: TBX2
subclass of: SO_0000673
so part of: TBX2
location: complement(join(431937..434224,434876..435294,448500..448675,452072..452148,460916..461062,528834..529101,614948..616131))
location: region:431937-616131:-1
so has part: feature:614948-616131:-1:exon
so has part: feature:528834-529101:-1:exon
so has part: feature:460916-461062:-1:exon
so has part: feature:452072-452148:-1:exon
so has part: feature:448500-448675:-1:exon
so has part: feature:434876-435294:-1:exon
so has part: feature:431937-434224:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:614948-616131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528834-529101:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460916-461062:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:452072-452148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:448500-448675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:434876-435294:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:431937-434224:-1:exon

TBX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TBX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-box transcription factor TBX2 isoform X3
translation: MSSSFPHPLFATPRGANGDLACLSALIAAHSQHHQHHQQHHQQQLLIGNNSATTTAAAVNPLHHHHHNNNNHHHHSSSSSHAALFQSLGMQMPPQPLPLPLPQPLPLPQPLPLPLPPTPVATVAPSSLPGHHHHHHHHQHHHHHHPATTPVQQQHHHQHAKLSACGIFPVSPLGALTGLDPAPFSLPAFLAAGHLSLQQHAASALVHHHHQQQQQQQQQQQQQQSPGSAAAAAAAVAATAAAARSTQQHQQHHHQQQQQHQLKEADDCLVAAAEDDPRVTLEGKELWDQFHGIGTEMVITKSGRRMFPAFKVRVSGLDKKAKYILLLDIVAADECRYKFHNSRWMVAGKADPELPRRLYIHPDSPATGDHWMGKAVTFHKLKLTNNLSDKHGYTILNSMHKYQPRFHVVRASELLRLPYSTFRTYVFPETQFLAVTAYQNDKITQLKIDHNPFAKGFRDTGNGRREKRQLALQCLRAFEEQARGVAHRGRGDFDDDDDEDHDEEEEEEEQKERPSPNTSPEHNTPAGGSVGSGERSSGGSGGSGGGADSGGSPGPPSSPAKERRPPSFVSRRHSRNSSASTPPETSPLKQQQQQYHFPHLHHLGSAFGKLGVAGGLPPTHPLLLHSGPLGPFLASVPGLDARTHGGGPSPALPGGPFGHPLLTPQGLAVPGLSGLLPYPYPYLPTASLPSPAFLSAAARGSWRYNPYSFPGLGAGSLPSQLPSILPAAAATAAAVAASAAGARRDVKPEKLETASHGEAEAAAAPGSGSPPADRSPSELRHMQRLVSGLGDGPP
SIO_010081: TBX2
subclass of: SO_0000673
so part of: TBX2
location: complement(join(433835..434224,434876..435294,448500..448672,452072..452148,460916..461062,528834..529101,614948..615858))
location: region:433835-615858:-1
so has part: feature:614948-615858:-1:exon
so has part: feature:528834-529101:-1:exon
so has part: feature:460916-461062:-1:exon
so has part: feature:452072-452148:-1:exon
so has part: feature:448500-448672:-1:exon
so has part: feature:434876-435294:-1:exon
so has part: feature:433835-434224:-1:exon

XP_032823420.1
type: Protein
SIO_000068: ncbiprotein

position:433835:-1
position: 433835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615858:-1
position: 615858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614948-615858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528834-529101:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460916-461062:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:452072-452148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:448500-448672:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:434876-435294:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:433835-434224:-1:exon

TBX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TBX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-box transcription factor TBX2 isoform X2
translation: MSSSFPHPLFATPRGANGDLACLSALIAAHSQHHQHHQQHHQQQLLIGNNSATTTAAAVNPLHHHHHNNNNHHHHSSSSSHAALFQSLGMQMPPQPLPLPLPQPLPLPQPLPLPLPPTPVATVAPSSLPGHHHHHHHHQHHHHHHPATTPVQQQHHHQHAKLSACGIFPVSPLGALTGLDPAPFSLPAFLAAGHLSLQQHAASALVHHHHQQQQQQQQQQQQQQSPGSAAAAAAAVAATAAAARSTQQHQQHHHQQQQQHQLKEADDCLVAAAEDDPRVTLEGKELWDQFHGIGTEMVITKSGRRMFPAFKVRVSGLDKKAKYILLLDIVAADECRYKFHNSRWMVAGKADPELPRRLYIHPDSPATGDHWMGKAVTFHKLKLTNNLSDKHGYTILNSMHKYQPRFHVVRASELLRLPYSTFRTYVFPETQFLAVTAYQNDKITQLKIDHNPFAKGFRDTGNGRREKRRQLALQCLRAFEEQARGVAHRGRGDFDDDDDEDHDEEEEEEEQKERPSPNTSPEHNTPGGSVGSGERSSGGSGGSGGGADSGGSPGPPSSPAKERRPPSFVSRRHSRNSSASTPPETSPLKQQQQQYHFPHLHHLGSAFGKLGVAGGLPPTHPLLLHSGPLGPFLASVPGLDARTHGGGPSPALPGGPFGHPLLTPQGLAVPGLSGLLPYPYPYLPTASLPSPAFLSAAARGSWRYNPYSFPGLGAGSLPSQLPSILPAAAATAAAVAASAAGARRDVKPEKLETASHGEAEAAAAPGSGSPPADRSPSELRHMQRLVSGLGDGPP
SIO_010081: TBX2
subclass of: SO_0000673
so part of: TBX2
location: complement(join(433835..434224,434876..435291,448500..448675,452072..452148,460916..461062,528834..529101,614948..615858))
location: region:433835-615858:-1
so has part: feature:614948-615858:-1:exon
so has part: feature:528834-529101:-1:exon
so has part: feature:460916-461062:-1:exon
so has part: feature:452072-452148:-1:exon
so has part: feature:448500-448675:-1:exon
so has part: feature:434876-435291:-1:exon
so has part: feature:433835-434224:-1:exon

XP_032823419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:614948-615858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528834-529101:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460916-461062:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:452072-452148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:448500-448675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:434876-435291:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:433835-434224:-1:exon

TBX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TBX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-box transcription factor TBX2 isoform X1
translation: MSSSFPHPLFATPRGANGDLACLSALIAAHSQHHQHHQQHHQQQLLIGNNSATTTAAAVNPLHHHHHNNNNHHHHSSSSSHAALFQSLGMQMPPQPLPLPLPQPLPLPQPLPLPLPPTPVATVAPSSLPGHHHHHHHHQHHHHHHPATTPVQQQHHHQHAKLSACGIFPVSPLGALTGLDPAPFSLPAFLAAGHLSLQQHAASALVHHHHQQQQQQQQQQQQQQSPGSAAAAAAAVAATAAAARSTQQHQQHHHQQQQQHQLKEADDCLVAAAEDDPRVTLEGKELWDQFHGIGTEMVITKSGRRMFPAFKVRVSGLDKKAKYILLLDIVAADECRYKFHNSRWMVAGKADPELPRRLYIHPDSPATGDHWMGKAVTFHKLKLTNNLSDKHGYTILNSMHKYQPRFHVVRASELLRLPYSTFRTYVFPETQFLAVTAYQNDKITQLKIDHNPFAKGFRDTGNGRREKRRQLALQCLRAFEEQARGVAHRGRGDFDDDDDEDHDEEEEEEEQKERPSPNTSPEHNTPAGGSVGSGERSSGGSGGSGGGADSGGSPGPPSSPAKERRPPSFVSRRHSRNSSASTPPETSPLKQQQQQYHFPHLHHLGSAFGKLGVAGGLPPTHPLLLHSGPLGPFLASVPGLDARTHGGGPSPALPGGPFGHPLLTPQGLAVPGLSGLLPYPYPYLPTASLPSPAFLSAAARGSWRYNPYSFPGLGAGSLPSQLPSILPAAAATAAAVAASAAGARRDVKPEKLETASHGEAEAAAAPGSGSPPADRSPSELRHMQRLVSGLGDGPP
SIO_010081: TBX2
subclass of: SO_0000673
so part of: TBX2
location: complement(join(433835..434224,434876..435294,448500..448675,452072..452148,460916..461062,528834..529101,614948..615858))
location: region:433835-615858:-1
so has part: feature:614948-615858:-1:exon
so has part: feature:528834-529101:-1:exon
so has part: feature:460916-461062:-1:exon
so has part: feature:452072-452148:-1:exon
so has part: feature:448500-448675:-1:exon
so has part: feature:434876-435294:-1:exon
so has part: feature:433835-434224:-1:exon

XP_032823418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:614948-615858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528834-529101:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460916-461062:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:452072-452148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:448500-448675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:434876-435294:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:433835-434224:-1:exon

LOC116950307
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950307
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(654692..702480)
location: region:654692-702480:-1
so has part: feature:654692-702480:-1:exon
subclass of: SO_0000010

116950307
type: Gene
SIO_000068: ncbigene

position:654692:-1
position: 654692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702480:-1
position: 702480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654692-702480:-1:exon

LOC116950307
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950307
product: S-antigen protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_032968029.1
SIO_010081: LOC116950307
subclass of: SO_0000673
so part of: LOC116950307
location: complement(join(654692..655494,700307..700447,702456..702480))
location: region:654692-702480:-1
so has part: feature:702456-702480:-1:exon
so has part: feature:700307-700447:-1:exon
so has part: feature:654692-655494:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:702456-702480:-1:exon

position:702456:-1
position: 702456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:700307-700447:-1:exon

position:700307:-1
position: 700307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700447:-1
position: 700447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:654692-655494:-1:exon

position:655494:-1
position: 655494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116950307
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950307
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-antigen protein-like
translation: MSRQSERHGLSVNNFSGGGPSSSQKAASKLNQQAVNPRGFSGCEPFDSGVELLLQEPPRIRGPRLSEAPVSQRPRVSEAPASQRPPRLRGPASQRPPRLRGPRVSEAPVSQRPRVSEAPVSQRPRVSEAPRLRGPRVSEAPRLRGPASQRPPCLRSPASQRPRVSEAPASQRPPRLRGPVSQRPRVSEAPVSQRPRVSEAPPLRGPASQRPPRLRGPRVSEAPVSQRPRVSEAPVSQRPRVSEAPVSQRPRVSEAPRLRGPASQRPPRLRGPASQRPPCLRGPASQRPPRLGEKGGEETFPGPGPPALGLGGGGANGSEGRG
SIO_010081: LOC116950307
subclass of: SO_0000673
so part of: LOC116950307
location: complement(join(654692..655494,700307..700447,702456..702480))
location: region:654692-702480:-1
so has part: feature:702456-702480:-1:exon
so has part: feature:700307-700447:-1:exon
so has part: feature:654692-655494:-1:exon

XP_032823920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:702456-702480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:700307-700447:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654692-655494:-1:exon

LOC116950308
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950308
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(781700..868991)
location: region:781700-868991:-1
so has part: feature:781700-868991:-1:exon
subclass of: SO_0000010

116950308
type: Gene
SIO_000068: ncbigene

position:781700:-1
position: 781700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868991:-1
position: 868991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:781700-868991:-1:exon

LOC116950308
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950308
product: mediator of RNA polymerase II transcription subunit 13-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 7 bases in 6 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032968030.1
SIO_010081: LOC116950308
subclass of: SO_0000673
so part of: LOC116950308
location: complement(join(781700..783388,783878..783978,784113..784286,784809..784981,785680..785856,787171..787329,787448..787590,788562..788785,789116..789308,790482..790741,791080..791203,792241..792378,792751..793167,793991..794192,794486..794710,794970..795149,795852..796445,797431..797781,797821..797930,799169..799302,800091..800346,801907..802021,803156..803268,803888..803898,806369..806597,807857..809043,809677..809786,810517..810747,813884..814039,815273..815536,816643..816788,818660..818743,819569..819653,865905..866139,868469..868991))
location: region:781700-868991:-1
so has part: feature:868469-868991:-1:exon
so has part: feature:865905-866139:-1:exon
so has part: feature:819569-819653:-1:exon
so has part: feature:818660-818743:-1:exon
so has part: feature:816643-816788:-1:exon
so has part: feature:815273-815536:-1:exon
so has part: feature:813884-814039:-1:exon
so has part: feature:810517-810747:-1:exon
so has part: feature:809677-809786:-1:exon
so has part: feature:807857-809043:-1:exon
so has part: feature:806369-806597:-1:exon
so has part: feature:803888-803898:-1:exon
so has part: feature:803156-803268:-1:exon
so has part: feature:801907-802021:-1:exon
so has part: feature:800091-800346:-1:exon
so has part: feature:799169-799302:-1:exon
so has part: feature:797821-797930:-1:exon
so has part: feature:797431-797781:-1:exon
so has part: feature:795852-796445:-1:exon
so has part: feature:794970-795149:-1:exon
so has part: feature:794486-794710:-1:exon
so has part: feature:793991-794192:-1:exon
so has part: feature:792751-793167:-1:exon
so has part: feature:792241-792378:-1:exon
so has part: feature:791080-791203:-1:exon
so has part: feature:790482-790741:-1:exon
so has part: feature:789116-789308:-1:exon
so has part: feature:788562-788785:-1:exon
so has part: feature:787448-787590:-1:exon
so has part: feature:787171-787329:-1:exon
so has part: feature:785680-785856:-1:exon
so has part: feature:784809-784981:-1:exon
so has part: feature:784113-784286:-1:exon
so has part: feature:783878-783978:-1:exon
so has part: feature:781700-783388:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:868469-868991:-1:exon

position:868469:-1
position: 868469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:865905-866139:-1:exon

position:865905:-1
position: 865905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866139:-1
position: 866139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:819569-819653:-1:exon

position:819569:-1
position: 819569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819653:-1
position: 819653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:818660-818743:-1:exon

position:818660:-1
position: 818660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818743:-1
position: 818743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:816643-816788:-1:exon

position:816643:-1
position: 816643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816788:-1
position: 816788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:815273-815536:-1:exon

position:815273:-1
position: 815273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815536:-1
position: 815536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:813884-814039:-1:exon

position:813884:-1
position: 813884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814039:-1
position: 814039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:810517-810747:-1:exon

position:810517:-1
position: 810517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810747:-1
position: 810747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:809677-809786:-1:exon

position:809677:-1
position: 809677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809786:-1
position: 809786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:807857-809043:-1:exon

position:807857:-1
position: 807857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809043:-1
position: 809043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:806369-806597:-1:exon

position:806369:-1
position: 806369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806597:-1
position: 806597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:803888-803898:-1:exon

position:803888:-1
position: 803888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803898:-1
position: 803898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:803156-803268:-1:exon

position:803156:-1
position: 803156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803268:-1
position: 803268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:801907-802021:-1:exon

position:801907:-1
position: 801907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802021:-1
position: 802021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:800091-800346:-1:exon

position:800091:-1
position: 800091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800346:-1
position: 800346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:799169-799302:-1:exon

position:799169:-1
position: 799169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799302:-1
position: 799302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:797821-797930:-1:exon

position:797821:-1
position: 797821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797930:-1
position: 797930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:797431-797781:-1:exon

position:797431:-1
position: 797431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797781:-1
position: 797781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:795852-796445:-1:exon

position:795852:-1
position: 795852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796445:-1
position: 796445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:794970-795149:-1:exon

position:794970:-1
position: 794970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795149:-1
position: 795149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:794486-794710:-1:exon

position:794486:-1
position: 794486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794710:-1
position: 794710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:793991-794192:-1:exon

position:793991:-1
position: 793991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794192:-1
position: 794192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:792751-793167:-1:exon

position:792751:-1
position: 792751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793167:-1
position: 793167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:792241-792378:-1:exon

position:792241:-1
position: 792241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792378:-1
position: 792378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:791080-791203:-1:exon

position:791080:-1
position: 791080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791203:-1
position: 791203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:790482-790741:-1:exon

position:790482:-1
position: 790482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790741:-1
position: 790741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:789116-789308:-1:exon

position:789116:-1
position: 789116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789308:-1
position: 789308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:788562-788785:-1:exon

position:788562:-1
position: 788562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788785:-1
position: 788785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:787448-787590:-1:exon

position:787448:-1
position: 787448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787590:-1
position: 787590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:787171-787329:-1:exon

position:787171:-1
position: 787171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787329:-1
position: 787329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:785680-785856:-1:exon

position:785680:-1
position: 785680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785856:-1
position: 785856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:784809-784981:-1:exon

position:784809:-1
position: 784809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784981:-1
position: 784981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:784113-784286:-1:exon

position:784113:-1
position: 784113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784286:-1
position: 784286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:783878-783978:-1:exon

position:783878:-1
position: 783878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783978:-1
position: 783978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:781700-783388:-1:exon

position:783388:-1
position: 783388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116950308
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950308
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 7 bases in 6 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like
translation: MTAASWVANGASLEDCHSNLFSLADLTGIKWRRYTCGLGASGPVIAAPAQEDPILHSFVRSLQTNLLAVWRRNGSPGLKELWVYWWGDQPNLGDVIHPELRGEEEGSWDNGLTYECRTLLFKAIHNLLERCLFNKSFVRIGKWFVKPYERDEKPVQKSEHLSCSFSFFLHGDSNVCTSVEICQHAPLYRLDVDLLDLASASSSPLNVILSPYGLSAVLTGQAYKRSDASTRKLIEEWQQFYPVVATGTVGPGSSSGWDGMMGAGAASAAPGGGEDGASEPMQDEDAPVAVEVLVGGVRMVFPAALVLVPQSEALLLAPLYPPGGARDPTSCGTLTPPTSPPHALLADYLRDHADVAVGRAGRRGATGRARWYPVGRGHRRGRGGGIGRRRQQPGPRWRRARTSGPTGWWSTRGKSTTRTGRLSSVRARWRGRTTRRRRANSHPGTSWSRRTVRHAAVQGAAQGAEAAKRRWAAERTSRSPLGTLRTRRRRRELGAVWLAVARPWRWLLFPPHLLELHLFVVRLRPPLVQAQALHGEGRQGGGGGGRARDPQGGASLHAVPPPGRGERRGRRRRGAGGAAGAGGGPGAGSAGLLLPELEAIGGGTPRTAHHHHHHAGKADKLWSAGQAGGKAADGGAGGSGGGPPSAAEVVQSPSPLPPTLSPHPRLGRDLDGVDGVDGVMQGGGGGAACSGVGNAGCVPAAVFYPPGGPAHVTPVFHGGEDSSSLKAGLAATAASGQQPSQPPLHHPHHHHHHHHHQQQQQQHGGCHLALPPGQELGDTALYAGLCAPQSPTSTDTRSMAAGATVPAWSVYQLPYDCGPGFGPPACPAAGAGSGVTVAPAREGGATASSSSEGRRRLLLQPSKRLKVCEERLQMHRQMHSRGAHPRHGGAADATADPYAFNDVDDQVSIGPGKKERPGGERSASKRAHPDHRVSHVGHEARSSSTSLMREVDLGVSFEDLENLFDNSSDDDMGGPLPAKPAPPGGGGEERHASREGRLPPAPAPAMPPCTLSSADLQRMFPTPPSLEQHPAFLARQTRAGKDYLNPDSAPGQTLLDPHGSSRGCSAGALRPEIEDDMGSPKPEELKVNFPPPTTPPQLQPFVGSPMFAPLKALPSGCCLPVRVPDSAIYRPSXTLGKLDPAINLPSVGSLGDQDYLQMSTPQTGTPLGGAGGGGGGSNGGGGVLPSPATPRFSTPNPRTRPDARTPRTPRGPGGLASIPSSTNYNSAGDLYSPAASTPSTFRPVNSVEPPATAGQALPEAHSLYVTLILSDTVLNLFRDRNFDSCCLCACNMNIKGADVGLYLPDPGLEIQRRCSCGFSAVVNRRLGPNAGLFLEDELDIVGGPLTEFGRAAQRRLECCGQTDADGGLRLGAARHPGFRLAGHGHPRVAARGQLQQPLPAARSWSRRPRRRLSLRRRCRDCRPCRACRACRRCPGPAAGPIGDALRLDLSDGSSECVMALEAGRQYVDKPVGGAMEETAVKGTLLHHWPERPAVEVSSLSSQDVVRLLGSLQPVLQDAIQKKRTGRSWENVQHVQGPLTWQQFHKMAGRGSYGTEESPEPLPIPSLLVGYDRDCLMVSPFSLPFWDKLLLEPFGSPRDIAYVVVCPENDALLHGARNFFRDLSTVYENCRLGLHRPITKVLRDGIMRVGRSAAQKVSEQPVDEWFSQNVGPPGSAAHEAFCKLRLFAQVCRHRLGPHLATQQLDQLPAGAVVEPACPSAAAAAAAAWRFGGSCRCPRLRSHGPERRPGPRAGRRERRRRRRDRGWCWRLWSRCPAGGGGAAGGGGGGPNGGGGGGAARRCSPGRRPCPAGSSSSSSRLRHKRPEQRLHAASARAANRHAVAVARHDGKPVFPAASPKLPWSGVDWSNARHDGSRVKPPPGHDGKSSRSEPVRRWRGGGRKLGHITTDGRPRQVNHCPMELLTGTERERERIGVPTEGGSLEVPVPPAVVVYIVDPFTSDEGRRRGAGGGGPDDPALGASVWTLGLLRCYLGMVKHLPKHM…
SIO_010081: LOC116950308
subclass of: SO_0000673
so part of: LOC116950308
location: complement(join(783256..783388,783878..783978,784113..784286,784809..784981,785680..785856,787171..787329,787448..787590,788562..788785,789116..789308,790482..790741,791080..791203,792241..792378,792751..793167,793991..794192,794486..794710,794970..795149,795852..796445,797431..797781,797821..797930,799169..799302,800091..800346,801907..802021,803156..803268,803888..803898,806369..806597,807857..809043,809677..809786,810517..810747,813884..814039,815273..815536,816643..816788,818660..818743,819569..819653,865905..866139,868469..868537))
location: region:783256-868537:-1
so has part: feature:868469-868537:-1:exon
so has part: feature:865905-866139:-1:exon
so has part: feature:819569-819653:-1:exon
so has part: feature:818660-818743:-1:exon
so has part: feature:816643-816788:-1:exon
so has part: feature:815273-815536:-1:exon
so has part: feature:813884-814039:-1:exon
so has part: feature:810517-810747:-1:exon
so has part: feature:809677-809786:-1:exon
so has part: feature:807857-809043:-1:exon
so has part: feature:806369-806597:-1:exon
so has part: feature:803888-803898:-1:exon
so has part: feature:803156-803268:-1:exon
so has part: feature:801907-802021:-1:exon
so has part: feature:800091-800346:-1:exon
so has part: feature:799169-799302:-1:exon
so has part: feature:797821-797930:-1:exon
so has part: feature:797431-797781:-1:exon
so has part: feature:795852-796445:-1:exon
so has part: feature:794970-795149:-1:exon
so has part: feature:794486-794710:-1:exon
so has part: feature:793991-794192:-1:exon
so has part: feature:792751-793167:-1:exon
so has part: feature:792241-792378:-1:exon
so has part: feature:791080-791203:-1:exon
so has part: feature:790482-790741:-1:exon
so has part: feature:789116-789308:-1:exon
so has part: feature:788562-788785:-1:exon
so has part: feature:787448-787590:-1:exon
so has part: feature:787171-787329:-1:exon
so has part: feature:785680-785856:-1:exon
so has part: feature:784809-784981:-1:exon
so has part: feature:784113-784286:-1:exon
so has part: feature:783878-783978:-1:exon
so has part: feature:783256-783388:-1:exon

XP_032823921.1
type: Protein
SIO_000068: ncbiprotein

position:783256:-1
position: 783256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868537:-1
position: 868537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:868469-868537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:865905-866139:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:819569-819653:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:818660-818743:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:816643-816788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:815273-815536:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:813884-814039:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:810517-810747:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:809677-809786:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:807857-809043:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:806369-806597:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:803888-803898:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:803156-803268:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:801907-802021:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:800091-800346:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:799169-799302:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:797821-797930:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:797431-797781:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:795852-796445:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:794970-795149:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:794486-794710:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:793991-794192:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:792751-793167:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:792241-792378:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:791080-791203:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:790482-790741:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:789116-789308:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:788562-788785:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:787448-787590:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:787171-787329:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:785680-785856:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:784809-784981:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:784113-784286:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:783878-783978:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:783256-783388:-1:exon

TUBD1
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TUBD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 881684..890918
location: region:881684-890918:1
so has part: feature:881684-890918:1:exon
subclass of: SO_0000010

116950091
type: Gene
SIO_000068: ncbigene

position:881684:1
position: 881684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890918:1
position: 890918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881684-890918:1:exon

TUBD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TUBD1
product: tubulin delta 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032967532.1
SIO_010081: TUBD1
subclass of: SO_0000673
so part of: TUBD1
location: join(881684..882306,884202..884440,884914..885064,885722..885938,886090..886342,886980..887123,887466..887540,888809..888992,890188..890918)
location: region:881684-890918:1
so has part: feature:881684-882306:1:exon
so has part: feature:884202-884440:1:exon
so has part: feature:884914-885064:1:exon
so has part: feature:885722-885938:1:exon
so has part: feature:886090-886342:1:exon
so has part: feature:886980-887123:1:exon
so has part: feature:887466-887540:1:exon
so has part: feature:888809-888992:1:exon
so has part: feature:890188-890918:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:881684-882306:1:exon

position:882306:1
position: 882306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:884202-884440:1:exon

position:884202:1
position: 884202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884440:1
position: 884440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:884914-885064:1:exon

position:884914:1
position: 884914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885064:1
position: 885064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:885722-885938:1:exon

position:885722:1
position: 885722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885938:1
position: 885938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:886090-886342:1:exon

position:886090:1
position: 886090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886342:1
position: 886342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:886980-887123:1:exon

position:886980:1
position: 886980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887123:1
position: 887123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:887466-887540:1:exon

position:887466:1
position: 887466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887540:1
position: 887540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:888809-888992:1:exon

position:888809:1
position: 888809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888992:1
position: 888992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:890188-890918:1:exon

position:890188:1
position: 890188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TUBD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TUBD1
product: tubulin delta 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032967530.1
SIO_010081: TUBD1
subclass of: SO_0000673
so part of: TUBD1
location: join(881684..881904,882147..882306,884202..884440,884914..885064,885722..885938,886090..886342,886980..887123,887466..887540,888809..888992,890188..890918)
location: region:881684-890918:1
so has part: feature:881684-881904:1:exon
so has part: feature:882147-882306:1:exon
so has part: feature:884202-884440:1:exon
so has part: feature:884914-885064:1:exon
so has part: feature:885722-885938:1:exon
so has part: feature:886090-886342:1:exon
so has part: feature:886980-887123:1:exon
so has part: feature:887466-887540:1:exon
so has part: feature:888809-888992:1:exon
so has part: feature:890188-890918:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:881684-881904:1:exon

position:881904:1
position: 881904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:882147-882306:1:exon

position:882147:1
position: 882147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:884202-884440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:884914-885064:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885722-885938:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:886090-886342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:886980-887123:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:887466-887540:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888809-888992:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:890188-890918:1:exon

TUBD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TUBD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin delta chain
translation: MSVVALQLGQCGNQLGSTWFEALIHDVRPAPGPPRTDDACYREAALERYFHSPAGSGLPEARAVLVDMERKVVARSVAMAARSGEWRYADGAAVCRTSGSANNWAYGFAGPGEHCLSEAMESVRAQVERCDRLSGFLAMMSVAGGTGSGLGTRLCIRLRDAYPKAGLLNHLTWPYSTGEVIVQNYNAVLTLAHLHGCSDALLVQQNDRTHRVCAQLLRRPAVSFSHLNAVVAAQLAGALLPARVRRDPPAGGPAAGAYLHDQLGELLQALVPHPELKLLSLHAVPQLPESSRDFTRYDWKGLLQELHRETQSPAPPPTSLARLLVLRGPDAHATPLGELAAGGSLCRWVPPEAALAVWSERRAPTGYGKSATLLANDTAVISPVEHAVSKAWRMFVSRAYVHQYTHHGVSEEDFLDSFTLLEQVIASYRQL
SIO_010081: TUBD1
subclass of: SO_0000673
so part of: TUBD1
location: join(884272..884440,884914..885064,885722..885938,886090..886342,886980..887123,887466..887540,888809..888992,890188..890290)
location: region:884272-890290:1
so has part: feature:884272-884440:1:exon
so has part: feature:884914-885064:1:exon
so has part: feature:885722-885938:1:exon
so has part: feature:886090-886342:1:exon
so has part: feature:886980-887123:1:exon
so has part: feature:887466-887540:1:exon
so has part: feature:888809-888992:1:exon
so has part: feature:890188-890290:1:exon

XP_032823421.1
type: Protein
SIO_000068: ncbiprotein

position:884272:1
position: 884272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890290:1
position: 890290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:884272-884440:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:884914-885064:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:885722-885938:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:886090-886342:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:886980-887123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:887466-887540:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:888809-888992:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:890188-890290:1:exon

TUBD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TUBD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin delta chain
translation: MSVVALQLGQCGNQLGSTWFEALIHDVRPAPGPPRTDDACYREAALERYFHSPAGSGLPEARAVLVDMERKVVARSVAMAARSGEWRYADGAAVCRTSGSANNWAYGFAGPGEHCLSEAMESVRAQVERCDRLSGFLAMMSVAGGTGSGLGTRLCIRLRDAYPKAGLLNHLTWPYSTGEVIVQNYNAVLTLAHLHGCSDALLVQQNDRTHRVCAQLLRRPAVSFSHLNAVVAAQLAGALLPARVRRDPPAGGPAAGAYLHDQLGELLQALVPHPELKLLSLHAVPQLPESSRDFTRYDWKGLLQELHRETQSPAPPPTSLARLLVLRGPDAHATPLGELAAGGSLCRWVPPEAALAVWSERRAPTGYGKSATLLANDTAVISPVEHAVSKAWRMFVSRAYVHQYTHHGVSEEDFLDSFTLLEQVIASYRQL
SIO_010081: TUBD1
subclass of: SO_0000673
so part of: TUBD1
location: join(884272..884440,884914..885064,885722..885938,886090..886342,886980..887123,887466..887540,888809..888992,890188..890290)
location: region:884272-890290:1
so has part: feature:884272-884440:1:exon
so has part: feature:884914-885064:1:exon
so has part: feature:885722-885938:1:exon
so has part: feature:886090-886342:1:exon
so has part: feature:886980-887123:1:exon
so has part: feature:887466-887540:1:exon
so has part: feature:888809-888992:1:exon
so has part: feature:890188-890290:1:exon

XP_032823423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:884272-884440:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:884914-885064:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:885722-885938:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:886090-886342:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:886980-887123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:887466-887540:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:888809-888992:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:890188-890290:1:exon

RNFT1
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: RNFT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(892953..906171)
location: region:892953-906171:-1
so has part: feature:892953-906171:-1:exon
subclass of: SO_0000010

116950093
type: Gene
SIO_000068: ncbigene

position:892953:-1
position: 892953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906171:-1
position: 906171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892953-906171:-1:exon

RNFT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: RNFT1
product: ring finger protein, transmembrane 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_032967533.1
SIO_010081: RNFT1
subclass of: SO_0000673
so part of: RNFT1
location: complement(join(892953..893903,896823..896924,897320..897385,899184..899336,900073..900226,901289..901389,902109..902185,903433..903800,905868..906171))
location: region:892953-906171:-1
so has part: feature:905868-906171:-1:exon
so has part: feature:903433-903800:-1:exon
so has part: feature:902109-902185:-1:exon
so has part: feature:901289-901389:-1:exon
so has part: feature:900073-900226:-1:exon
so has part: feature:899184-899336:-1:exon
so has part: feature:897320-897385:-1:exon
so has part: feature:896823-896924:-1:exon
so has part: feature:892953-893903:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:905868-906171:-1:exon

position:905868:-1
position: 905868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:903433-903800:-1:exon

position:903433:-1
position: 903433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903800:-1
position: 903800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:902109-902185:-1:exon

position:902109:-1
position: 902109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902185:-1
position: 902185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:901289-901389:-1:exon

position:901289:-1
position: 901289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901389:-1
position: 901389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:900073-900226:-1:exon

position:900073:-1
position: 900073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900226:-1
position: 900226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:899184-899336:-1:exon

position:899184:-1
position: 899184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899336:-1
position: 899336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:897320-897385:-1:exon

position:897320:-1
position: 897320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897385:-1
position: 897385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:896823-896924:-1:exon

position:896823:-1
position: 896823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896924:-1
position: 896924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:892953-893903:-1:exon

position:893903:-1
position: 893903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNFT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: RNFT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNFT1
translation: MQRRRGSESLQQDGDLDSSMAGLAVGTAGFSPSSAGDVVLQMVARHDAAGGGGGSSGVPPGDSSGPAHRHLLSAYAPAQPSAPARGDGGGGGGGGDAGDPGGEAGNPTAAFAEMRPLLGWLQRGLPFLLLLLTRLGYQHRLGLAVLAGLFLTFFYANRTLKTQVTLRERRSCVKTLWLLVFLAGNVAFLYYTFRAQRLHYSLMLASPSLLPVELWDLLWIVGIGDFVGKFISIGLKCLLVALPSSVLPFGSRGRWYVLVEEGSQLYRYLLPALPWFHFLMGTRRPGDARIFHMLLALLYFCAKCLGLYSNVTALRKSCAMACAQQVYGVPASKQQCAEAGDICPICQAAFAQPLMLVCRHVLCAECMALWCDRERACPLCRVLISPCAPRWRDGSTSAHLQLY
SIO_010081: RNFT1
subclass of: SO_0000673
so part of: RNFT1
location: complement(join(893769..893903,896823..896924,897320..897385,899184..899336,900073..900226,901289..901389,902109..902185,903433..903800,905868..905923))
location: region:893769-905923:-1
so has part: feature:905868-905923:-1:exon
so has part: feature:903433-903800:-1:exon
so has part: feature:902109-902185:-1:exon
so has part: feature:901289-901389:-1:exon
so has part: feature:900073-900226:-1:exon
so has part: feature:899184-899336:-1:exon
so has part: feature:897320-897385:-1:exon
so has part: feature:896823-896924:-1:exon
so has part: feature:893769-893903:-1:exon

XP_032823424.1
type: Protein
SIO_000068: ncbiprotein

position:893769:-1
position: 893769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905923:-1
position: 905923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:905868-905923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903433-903800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:902109-902185:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:901289-901389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:900073-900226:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:899184-899336:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:897320-897385:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:896823-896924:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:893769-893903:-1:exon

METTL27
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: METTL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 907582..920497
location: region:907582-920497:1
so has part: feature:907582-920497:1:exon
subclass of: SO_0000010

116950094
type: Gene
SIO_000068: ncbigene

position:907582:1
position: 907582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920497:1
position: 920497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:907582-920497:1:exon

METTL27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: METTL27
product: methyltransferase like 27, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032967535.1
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: join(907582..907699,909236..909339,910788..910953,912338..912469,913942..914077,914328..914420,919996..920497)
location: region:907582-920497:1
so has part: feature:907582-907699:1:exon
so has part: feature:909236-909339:1:exon
so has part: feature:910788-910953:1:exon
so has part: feature:912338-912469:1:exon
so has part: feature:913942-914077:1:exon
so has part: feature:914328-914420:1:exon
so has part: feature:919996-920497:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:907582-907699:1:exon

position:907699:1
position: 907699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:909236-909339:1:exon

position:909236:1
position: 909236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909339:1
position: 909339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:910788-910953:1:exon

position:910788:1
position: 910788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910953:1
position: 910953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:912338-912469:1:exon

position:912338:1
position: 912338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912469:1
position: 912469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:913942-914077:1:exon

position:913942:1
position: 913942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914077:1
position: 914077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:914328-914420:1:exon

position:914328:1
position: 914328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914420:1
position: 914420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:919996-920497:1:exon

position:919996:1
position: 919996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

METTL27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: METTL27
product: methyltransferase like 27, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032967540.1
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: join(907582..907683,909236..909339,910827..910953,912338..912469,913275..913413,913942..914077,914328..914420,919996..920497)
location: region:907582-920497:1
so has part: feature:907582-907683:1:exon
so has part: feature:909236-909339:1:exon
so has part: feature:910827-910953:1:exon
so has part: feature:912338-912469:1:exon
so has part: feature:913275-913413:1:exon
so has part: feature:913942-914077:1:exon
so has part: feature:914328-914420:1:exon
so has part: feature:919996-920497:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:907582-907683:1:exon

position:907683:1
position: 907683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:909236-909339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:910827-910953:1:exon

position:910827:1
position: 910827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:912338-912469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:913275-913413:1:exon

position:913275:1
position: 913275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913413:1
position: 913413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:913942-914077:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:914328-914420:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:919996-920497:1:exon

METTL27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: METTL27
product: methyltransferase like 27, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032967539.1
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: join(907582..907683,909236..909339,910788..910953,912338..912469,913942..914077,914328..914420,915103..915368)
location: region:907582-915368:1
so has part: feature:907582-907683:1:exon
so has part: feature:909236-909339:1:exon
so has part: feature:910788-910953:1:exon
so has part: feature:912338-912469:1:exon
so has part: feature:913942-914077:1:exon
so has part: feature:914328-914420:1:exon
so has part: feature:915103-915368:1:exon

position:915368:1
position: 915368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:907582-907683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:909236-909339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:910788-910953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912338-912469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:913942-914077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:914328-914420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:915103-915368:1:exon

position:915103:1
position: 915103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

METTL27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: METTL27
product: methyltransferase like 27, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032967542.1
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: join(907583..907683,909236..909339,910062..910219,910827..910953,912338..912469,913942..914077,914328..914420,919996..920497)
location: region:907583-920497:1
so has part: feature:907583-907683:1:exon
so has part: feature:909236-909339:1:exon
so has part: feature:910062-910219:1:exon
so has part: feature:910827-910953:1:exon
so has part: feature:912338-912469:1:exon
so has part: feature:913942-914077:1:exon
so has part: feature:914328-914420:1:exon
so has part: feature:919996-920497:1:exon

position:907583:1
position: 907583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:907583-907683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:909236-909339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:910062-910219:1:exon

position:910062:1
position: 910062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910219:1
position: 910219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:910827-910953:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:912338-912469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:913942-914077:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:914328-914420:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:919996-920497:1:exon

METTL27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: METTL27
product: methyltransferase like 27, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032967541.1
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: join(907583..907683,909236..909339,910766..910953,912338..912469,913942..914077,914328..914420,919996..920497)
location: region:907583-920497:1
so has part: feature:907583-907683:1:exon
so has part: feature:909236-909339:1:exon
so has part: feature:910766-910953:1:exon
so has part: feature:912338-912469:1:exon
so has part: feature:913942-914077:1:exon
so has part: feature:914328-914420:1:exon
so has part: feature:919996-920497:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:907583-907683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:909236-909339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:910766-910953:1:exon

position:910766:1
position: 910766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:912338-912469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:913942-914077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:914328-914420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:919996-920497:1:exon

METTL27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: METTL27
product: methyltransferase like 27, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032967534.1
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: join(907583..907683,909236..909339,910788..910953,912338..912469,913942..914077,914328..914420,919996..920497)
location: region:907583-920497:1
so has part: feature:907583-907683:1:exon
so has part: feature:909236-909339:1:exon
so has part: feature:910788-910953:1:exon
so has part: feature:912338-912469:1:exon
so has part: feature:913942-914077:1:exon
so has part: feature:914328-914420:1:exon
so has part: feature:919996-920497:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:907583-907683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:909236-909339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:910788-910953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912338-912469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:913942-914077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:914328-914420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:919996-920497:1:exon

METTL27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: METTL27
product: methyltransferase like 27, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032967537.1
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: join(907583..907683,909236..909339,910788..910953,912338..912469,913948..914077,914328..914420,919996..920497)
location: region:907583-920497:1
so has part: feature:907583-907683:1:exon
so has part: feature:909236-909339:1:exon
so has part: feature:910788-910953:1:exon
so has part: feature:912338-912469:1:exon
so has part: feature:913948-914077:1:exon
so has part: feature:914328-914420:1:exon
so has part: feature:919996-920497:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:907583-907683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:909236-909339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:910788-910953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912338-912469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:913948-914077:1:exon

position:913948:1
position: 913948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:914328-914420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:919996-920497:1:exon

METTL27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: METTL27
product: methyltransferase like 27, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032967538.1
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: join(907583..907683,909236..909339,910827..910953,912338..912469,913942..914077,914328..914420,919996..920497)
location: region:907583-920497:1
so has part: feature:907583-907683:1:exon
so has part: feature:909236-909339:1:exon
so has part: feature:910827-910953:1:exon
so has part: feature:912338-912469:1:exon
so has part: feature:913942-914077:1:exon
so has part: feature:914328-914420:1:exon
so has part: feature:919996-920497:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:907583-907683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:909236-909339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:910827-910953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912338-912469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:913942-914077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:914328-914420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:919996-920497:1:exon

METTL27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: METTL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 27 isoform X1
translation: MGGQHHARPPLSPLVTLTTHRTRHCLPDNNRPAVPRTMAEGPSRSFSQVKEMVAAAHRASSATEKLRFYEQWAKDYDADVHVLEYRAPFLAAEMLASLVPVGERASATVLDVACGTGLVAEQLQRLRFGRIRGIDGSSEMLAVAATKGVYESTRRCVLGDGPLPLESDAFDAVIIVGALSDGQVPHAILPELVRVAKPGAPLCLTTRSSAENAEFLLQLEGRMRELSSAGAWRLVRRQEVARWERAIADDAGEAFEGTAPPSYIPGVVYLYRKLD
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: join(909272..909339,910788..910953,912338..912469,913942..914077,914328..914420,919996..920228)
location: region:909272-920228:1
so has part: feature:909272-909339:1:exon
so has part: feature:910788-910953:1:exon
so has part: feature:912338-912469:1:exon
so has part: feature:913942-914077:1:exon
so has part: feature:914328-914420:1:exon
so has part: feature:919996-920228:1:exon

XP_032823425.1
type: Protein
SIO_000068: ncbiprotein

position:909272:1
position: 909272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920228:1
position: 920228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:909272-909339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:910788-910953:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912338-912469:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:913942-914077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914328-914420:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:919996-920228:1:exon

METTL27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: METTL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 27 isoform X1
translation: MGGQHHARPPLSPLVTLTTHRTRHCLPDNNRPAVPRTMAEGPSRSFSQVKEMVAAAHRASSATEKLRFYEQWAKDYDADVHVLEYRAPFLAAEMLASLVPVGERASATVLDVACGTGLVAEQLQRLRFGRIRGIDGSSEMLAVAATKGVYESTRRCVLGDGPLPLESDAFDAVIIVGALSDGQVPHAILPELVRVAKPGAPLCLTTRSSAENAEFLLQLEGRMRELSSAGAWRLVRRQEVARWERAIADDAGEAFEGTAPPSYIPGVVYLYRKLD
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: join(909272..909339,910788..910953,912338..912469,913942..914077,914328..914420,919996..920228)
location: region:909272-920228:1
so has part: feature:909272-909339:1:exon
so has part: feature:910788-910953:1:exon
so has part: feature:912338-912469:1:exon
so has part: feature:913942-914077:1:exon
so has part: feature:914328-914420:1:exon
so has part: feature:919996-920228:1:exon

XP_032823426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:909272-909339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:910788-910953:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912338-912469:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:913942-914077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914328-914420:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:919996-920228:1:exon

METTL27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: METTL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 27 isoform X2
translation: MGGQHHARPPLSPLVTLTTHRTRHCLPDNNRPAVPRTMAEGPSRSFSQVKEMVAAAHRASSATEKLRFYEQWAKDYDADVHVLEYRAPFLAAEMLASLVPVGERASATVLDVACGTGLVAEQRLRFGRIRGIDGSSEMLAVAATKGVYESTRRCVLGDGPLPLESDAFDAVIIVGALSDGQVPHAILPELVRVAKPGAPLCLTTRSSAENAEFLLQLEGRMRELSSAGAWRLVRRQEVARWERAIADDAGEAFEGTAPPSYIPGVVYLYRKLD
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: join(909272..909339,910788..910953,912338..912469,913948..914077,914328..914420,919996..920228)
location: region:909272-920228:1
so has part: feature:909272-909339:1:exon
so has part: feature:910788-910953:1:exon
so has part: feature:912338-912469:1:exon
so has part: feature:913948-914077:1:exon
so has part: feature:914328-914420:1:exon
so has part: feature:919996-920228:1:exon

XP_032823428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:909272-909339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:910788-910953:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912338-912469:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:913948-914077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914328-914420:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:919996-920228:1:exon

METTL27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: METTL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 27 isoform X3
translation: MGGQHHARPPLSPLVTLTTHRTRTMAEGPSRSFSQVKEMVAAAHRASSATEKLRFYEQWAKDYDADVHVLEYRAPFLAAEMLASLVPVGERASATVLDVACGTGLVAEQLQRLRFGRIRGIDGSSEMLAVAATKGVYESTRRCVLGDGPLPLESDAFDAVIIVGALSDGQVPHAILPELVRVAKPGAPLCLTTRSSAENAEFLLQLEGRMRELSSAGAWRLVRRQEVARWERAIADDAGEAFEGTAPPSYIPGVVYLYRKLD
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: join(909272..909339,910827..910953,912338..912469,913942..914077,914328..914420,919996..920228)
location: region:909272-920228:1
so has part: feature:909272-909339:1:exon
so has part: feature:910827-910953:1:exon
so has part: feature:912338-912469:1:exon
so has part: feature:913942-914077:1:exon
so has part: feature:914328-914420:1:exon
so has part: feature:919996-920228:1:exon

XP_032823429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:909272-909339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:910827-910953:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912338-912469:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:913942-914077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914328-914420:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:919996-920228:1:exon

METTL27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: METTL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 27 isoform X4
translation: MGGQHHARPPLSPLVTLTTHRTRHCLPDNNRPAVPRTMAEGPSRSFSQVKEMVAAAHRASSATEKLRFYEQWAKDYDADVHVLEYRAPFLAAEMLASLVPVGERASATVLDVACGTGLVAEQLQRLRFGRIRGIDGSSEMLAVAATKGVYESTRRCVLGDGPLPLESDAFDAVIIVGALSDGQVPHAILPELVRVAKPGFIILVRSWIPLEMVHDWKRIAVATYVELLSPPYVANRANRGCGGRTTN
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: join(909272..909339,910788..910953,912338..912469,913942..914077,914328..914420,915103..915251)
location: region:909272-915251:1
so has part: feature:909272-909339:1:exon
so has part: feature:910788-910953:1:exon
so has part: feature:912338-912469:1:exon
so has part: feature:913942-914077:1:exon
so has part: feature:914328-914420:1:exon
so has part: feature:915103-915251:1:exon

XP_032823430.1
type: Protein
SIO_000068: ncbiprotein

position:915251:1
position: 915251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:909272-909339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:910788-910953:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912338-912469:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:913942-914077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914328-914420:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:915103-915251:1:exon

METTL27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: METTL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 27 isoform X6
translation: MAEGPSRSFSQVKEMVAAAHRASSATEKLRFYEQWAKDYDADVHVLEYRAPFLAAEMLASLVPVGERASATVLDVACGTGLVAEQLQRLRFGRIRGIDGSSEMLAVAATKGVYESTRRCVLGDGPLPLESDAFDAVIIVGALSDGQVPHAILPELVRVAKPGAPLCLTTRSSAENAEFLLQLEGRMRELSSAGAWRLVRRQEVARWERAIADDAGEAFEGTAPPSYIPGVVYLYRKLD
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: join(910831..910953,912338..912469,913942..914077,914328..914420,919996..920228)
location: region:910831-920228:1
so has part: feature:910831-910953:1:exon
so has part: feature:912338-912469:1:exon
so has part: feature:913942-914077:1:exon
so has part: feature:914328-914420:1:exon
so has part: feature:919996-920228:1:exon

XP_032823432.1
type: Protein
SIO_000068: ncbiprotein

position:910831:1
position: 910831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910831-910953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:912338-912469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:913942-914077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:914328-914420:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:919996-920228:1:exon

METTL27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: METTL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 27 isoform X6
translation: MAEGPSRSFSQVKEMVAAAHRASSATEKLRFYEQWAKDYDADVHVLEYRAPFLAAEMLASLVPVGERASATVLDVACGTGLVAEQLQRLRFGRIRGIDGSSEMLAVAATKGVYESTRRCVLGDGPLPLESDAFDAVIIVGALSDGQVPHAILPELVRVAKPGAPLCLTTRSSAENAEFLLQLEGRMRELSSAGAWRLVRRQEVARWERAIADDAGEAFEGTAPPSYIPGVVYLYRKLD
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: join(910831..910953,912338..912469,913942..914077,914328..914420,919996..920228)
location: region:910831-920228:1
so has part: feature:910831-910953:1:exon
so has part: feature:912338-912469:1:exon
so has part: feature:913942-914077:1:exon
so has part: feature:914328-914420:1:exon
so has part: feature:919996-920228:1:exon

XP_032823433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:910831-910953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:912338-912469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:913942-914077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:914328-914420:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:919996-920228:1:exon

METTL27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: METTL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 27 isoform X5
translation: MMRTCTCWSTVRRSSRPRCWRLSCPWASGRAPRCWTWRAALGSWLSSVARLRPGIPAPLRIPQRAPRLAHVSNWQDGAATPKSHRRPISQRHALQRLRFGRIRGIDGSSEMLAVAATKGVYESTRRCVLGDGPLPLESDAFDAVIIVGALSDGQVPHAILPELVRVAKPGAPLCLTTRSSAENAEFLLQLEGRMRELSSAGAWRLVRRQEVARWERAIADDAGEAFEGTAPPSYIPGVVYLYRKLD
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: join(910946..910953,912338..912469,913275..913413,913942..914077,914328..914420,919996..920228)
location: region:910946-920228:1
so has part: feature:910946-910953:1:exon
so has part: feature:912338-912469:1:exon
so has part: feature:913275-913413:1:exon
so has part: feature:913942-914077:1:exon
so has part: feature:914328-914420:1:exon
so has part: feature:919996-920228:1:exon

XP_032823431.1
type: Protein
SIO_000068: ncbiprotein

position:910946:1
position: 910946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910946-910953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:912338-912469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:913275-913413:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:913942-914077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914328-914420:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:919996-920228:1:exon

LOC116950095
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950095
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 926104..955436
location: region:926104-955436:1
so has part: feature:926104-955436:1:exon
subclass of: SO_0000010

116950095
type: Gene
SIO_000068: ncbigene

position:926104:1
position: 926104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955436:1
position: 955436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926104-955436:1:exon

LOC116950095
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950095
product: large neutral amino acids transporter small subunit 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032967543.1
SIO_010081: LOC116950095
subclass of: SO_0000673
so part of: LOC116950095
location: join(926104..926509,936017..936196,936917..937133,939937..939992,940597..940673,942844..942936,946205..946338,946826..946977,947540..947671,948562..948688,949414..949540,949800..949873,954068..954194,955283..955436)
location: region:926104-955436:1
so has part: feature:926104-926509:1:exon
so has part: feature:936017-936196:1:exon
so has part: feature:936917-937133:1:exon
so has part: feature:939937-939992:1:exon
so has part: feature:940597-940673:1:exon
so has part: feature:942844-942936:1:exon
so has part: feature:946205-946338:1:exon
so has part: feature:946826-946977:1:exon
so has part: feature:947540-947671:1:exon
so has part: feature:948562-948688:1:exon
so has part: feature:949414-949540:1:exon
so has part: feature:949800-949873:1:exon
so has part: feature:954068-954194:1:exon
so has part: feature:955283-955436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:926104-926509:1:exon

position:926509:1
position: 926509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:936017-936196:1:exon

position:936017:1
position: 936017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936196:1
position: 936196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:936917-937133:1:exon

position:936917:1
position: 936917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937133:1
position: 937133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:939937-939992:1:exon

position:939937:1
position: 939937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939992:1
position: 939992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:940597-940673:1:exon

position:940597:1
position: 940597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940673:1
position: 940673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:942844-942936:1:exon

position:942844:1
position: 942844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942936:1
position: 942936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:946205-946338:1:exon

position:946205:1
position: 946205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946338:1
position: 946338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:946826-946977:1:exon

position:946826:1
position: 946826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946977:1
position: 946977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:947540-947671:1:exon

position:947540:1
position: 947540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947671:1
position: 947671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:948562-948688:1:exon

position:948562:1
position: 948562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948688:1
position: 948688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:949414-949540:1:exon

position:949414:1
position: 949414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949540:1
position: 949540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:949800-949873:1:exon

position:949800:1
position: 949800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949873:1
position: 949873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:954068-954194:1:exon

position:954068:1
position: 954068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954194:1
position: 954194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:955283-955436:1:exon

position:955283:1
position: 955283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116950095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950095
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: large neutral amino acids transporter small subunit 4-like
translation: MRGAGKGWSLARRWWLASTALLESLITSGALLGWSSLLPVLMAEGVFSGLCAQPDEGLNATAGPSDLPDNVSGVVALRDAGGYASCPRQETRLHVAFTVGAFVQAATVLPLGVLMDRYGARRLRQIGSAAFCLSCIFFSYTAANPGNLSTLVFVAVSLNGFGGMCINVSGQMLAEMFQTISNVFSALLLGSFCSAAFTMTILKVMYEAGVPFIYICLGWALLAVVIFLNAMFGWPEEAMTGPAHMNHSIRLKLSFRGSQRGTQGKEFYAQMAAMGYRLRPDLREQHSLLQSADRTSTERSLAFMRSIFTPVMLWSMVTMAVTQLHLTFYLGSLGSLLPGGPADTELYVTVFGLLQPLCLLVCPLLGHLLMRETAASRADPAVAESEEERDLSRKITKVRRAMCVFFTTSVLLLAFGITSLVPNLHLQIATFILHTVDRAAVAMACNELYTAVFPESHFGYLNGVQFLASALVTLLQHPLHLVLVDDTLADSALWVNGLLLAVSVLSLGLPFYLLYYQRRLAKELGENSAVCSQPTLPEEAHTTK
SIO_010081: LOC116950095
subclass of: SO_0000673
so part of: LOC116950095
location: join(936031..936196,936917..937133,939937..939992,940597..940673,942844..942936,946205..946338,946826..946977,947540..947671,948562..948688,949414..949540,949800..949873,954068..954194,955283..955435)
location: region:936031-955435:1
so has part: feature:936031-936196:1:exon
so has part: feature:936917-937133:1:exon
so has part: feature:939937-939992:1:exon
so has part: feature:940597-940673:1:exon
so has part: feature:942844-942936:1:exon
so has part: feature:946205-946338:1:exon
so has part: feature:946826-946977:1:exon
so has part: feature:947540-947671:1:exon
so has part: feature:948562-948688:1:exon
so has part: feature:949414-949540:1:exon
so has part: feature:949800-949873:1:exon
so has part: feature:954068-954194:1:exon
so has part: feature:955283-955435:1:exon

XP_032823434.1
type: Protein
SIO_000068: ncbiprotein

position:936031:1
position: 936031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955435:1
position: 955435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:936031-936196:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936917-937133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:939937-939992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940597-940673:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:942844-942936:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:946205-946338:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:946826-946977:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:947540-947671:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:948562-948688:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:949414-949540:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:949800-949873:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:954068-954194:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:955283-955435:1:exon

LOC116950096
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(960816..974981)
location: region:960816-974981:-1
so has part: feature:960816-974981:-1:exon
subclass of: SO_0000010

116950096
type: Gene
SIO_000068: ncbigene

position:960816:-1
position: 960816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974981:-1
position: 974981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:960816-974981:-1:exon

LOC116950096
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950096
product: dual specificity tyrosine-phosphorylation-regulated kinase 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032967544.1
SIO_010081: LOC116950096
subclass of: SO_0000673
so part of: LOC116950096
location: complement(join(960816..961029,961717..962136,962758..962875,963697..963757,964935..965104,967013..967094,967805..967940,968884..969018,969774..969910,971255..971403,971838..971898,972728..972777,974667..974981))
location: region:960816-974981:-1
so has part: feature:974667-974981:-1:exon
so has part: feature:972728-972777:-1:exon
so has part: feature:971838-971898:-1:exon
so has part: feature:971255-971403:-1:exon
so has part: feature:969774-969910:-1:exon
so has part: feature:968884-969018:-1:exon
so has part: feature:967805-967940:-1:exon
so has part: feature:967013-967094:-1:exon
so has part: feature:964935-965104:-1:exon
so has part: feature:963697-963757:-1:exon
so has part: feature:962758-962875:-1:exon
so has part: feature:961717-962136:-1:exon
so has part: feature:960816-961029:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:974667-974981:-1:exon

position:974667:-1
position: 974667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:972728-972777:-1:exon

position:972728:-1
position: 972728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972777:-1
position: 972777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:971838-971898:-1:exon

position:971838:-1
position: 971838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971898:-1
position: 971898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:971255-971403:-1:exon

position:971255:-1
position: 971255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971403:-1
position: 971403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:969774-969910:-1:exon

position:969774:-1
position: 969774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969910:-1
position: 969910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:968884-969018:-1:exon

position:968884:-1
position: 968884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969018:-1
position: 969018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:967805-967940:-1:exon

position:967805:-1
position: 967805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:967940:-1
position: 967940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:967013-967094:-1:exon

position:967013:-1
position: 967013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:967094:-1
position: 967094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:964935-965104:-1:exon

position:964935:-1
position: 964935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965104:-1
position: 965104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:963697-963757:-1:exon

position:963697:-1
position: 963697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963757:-1
position: 963757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:962758-962875:-1:exon

position:962758:-1
position: 962758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962875:-1
position: 962875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:961717-962136:-1:exon

position:961717:-1
position: 961717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962136:-1
position: 962136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:960816-961029:-1:exon

position:961029:-1
position: 961029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116950096
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity tyrosine-phosphorylation-regulated kinase 4-like
translation: MAENKDTSVPGQASPMDETIVFAEAGMCCTPADVLVKFREKMTEFECDEILTYKWIYYFKMRSATEGASNIGYDDENNHYIPVIDEHLAYRYQVLKVLGIGGYGQVLQCLDHKTKQQVALKMFKHDSSIVQNTYNPEREILNVLKSVDGNNIIRLLQTFRFRGHYNMVLELVLGGTLKEELSITCKVDLPKIRLYMRSILKALVKLKSEAIIHGDLKLENILVKDHDTGDVRLADFGLSVRERRNFFTHRGTKGYMAPEMYLNLPVTCSVDMWSLGCIAAELATGSRLFTKKQIYHVGRIIQVLGLPPMNIVTASKVKIIRFDDEGGVYSNGRKTIPGSDPLDKLLGIENIHFLHFVRRCLEWDPIRRLTPQQALDHQWIRGTSPDPAVVPQSVVASPSLDPAAPVPSDAHETTYLTPGNCGTISGPSDPEPVPSLLASTNTRKSYVTALESNCELPGDVISLSLPTSIHAQGQCDEWSSGTQWGLCENIGGEEIESTMRQQWEPIRCPSKEHHDEGKEDAVTFPRATQAKGPRRRFPRVKNGFRALLCFIRKYCCCGVGLVG
SIO_010081: LOC116950096
subclass of: SO_0000673
so part of: LOC116950096
location: complement(join(960843..961029,961717..962136,962758..962875,963697..963757,964935..965104,967013..967094,967805..967940,968884..969018,969774..969910,971255..971403,971838..971898,972728..972763))
location: region:960843-972763:-1
so has part: feature:972728-972763:-1:exon
so has part: feature:971838-971898:-1:exon
so has part: feature:971255-971403:-1:exon
so has part: feature:969774-969910:-1:exon
so has part: feature:968884-969018:-1:exon
so has part: feature:967805-967940:-1:exon
so has part: feature:967013-967094:-1:exon
so has part: feature:964935-965104:-1:exon
so has part: feature:963697-963757:-1:exon
so has part: feature:962758-962875:-1:exon
so has part: feature:961717-962136:-1:exon
so has part: feature:960843-961029:-1:exon

XP_032823435.1
type: Protein
SIO_000068: ncbiprotein

position:960843:-1
position: 960843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972763:-1
position: 972763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972728-972763:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:971838-971898:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:971255-971403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:969774-969910:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968884-969018:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967805-967940:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967013-967094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:964935-965104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963697-963757:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:962758-962875:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:961717-962136:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:960843-961029:-1:exon

LOC116950097
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(982128..985888)
location: region:982128-985888:-1
so has part: feature:982128-985888:-1:exon
subclass of: SO_0000011

116950097
type: Gene
SIO_000068: ncbigene

position:982128:-1
position: 982128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:985888:-1
position: 985888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982128-985888:-1:exon

LOC116950097
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116950097
product: uncharacterized LOC116950097
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XR_004403961.1
SIO_010081: LOC116950097
subclass of: SO_0000673
so part of: LOC116950097
location: complement(join(982128..984050,985720..985888))
location: region:982128-985888:-1
so has part: feature:985720-985888:-1:exon
so has part: feature:982128-984050:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:985720-985888:-1:exon

position:985720:-1
position: 985720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:982128-984050:-1:exon

position:984050:-1
position: 984050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRR11
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: PRR11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 986212..997823
location: region:986212-997823:1
so has part: feature:986212-997823:1:exon
subclass of: SO_0000010

116950098
type: Gene
SIO_000068: ncbigene

position:986212:1
position: 986212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997823:1
position: 997823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:986212-997823:1:exon

PRR11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: PRR11
product: proline rich 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032967546.1
SIO_010081: PRR11
subclass of: SO_0000673
so part of: PRR11
location: join(986212..986286,986571..986598,986761..986872,988813..988954,990335..990457,991609..991815,993326..993424,994709..994824,995413..995475,996225..996321,996840..997823)
location: region:986212-997823:1
so has part: feature:986212-986286:1:exon
so has part: feature:986571-986598:1:exon
so has part: feature:986761-986872:1:exon
so has part: feature:988813-988954:1:exon
so has part: feature:990335-990457:1:exon
so has part: feature:991609-991815:1:exon
so has part: feature:993326-993424:1:exon
so has part: feature:994709-994824:1:exon
so has part: feature:995413-995475:1:exon
so has part: feature:996225-996321:1:exon
so has part: feature:996840-997823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:986212-986286:1:exon

position:986286:1
position: 986286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:986571-986598:1:exon

position:986571:1
position: 986571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986598:1
position: 986598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:986761-986872:1:exon

position:986761:1
position: 986761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986872:1
position: 986872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:988813-988954:1:exon

position:988813:1
position: 988813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988954:1
position: 988954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:990335-990457:1:exon

position:990335:1
position: 990335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990457:1
position: 990457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:991609-991815:1:exon

position:991609:1
position: 991609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991815:1
position: 991815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:993326-993424:1:exon

position:993326:1
position: 993326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993424:1
position: 993424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:994709-994824:1:exon

position:994709:1
position: 994709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994824:1
position: 994824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:995413-995475:1:exon

position:995413:1
position: 995413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995475:1
position: 995475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:996225-996321:1:exon

position:996225:1
position: 996225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:996321:1
position: 996321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:996840-997823:1:exon

position:996840:1
position: 996840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRR11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: PRR11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 11
translation: MSKSRRRRWKTERTRGRPLGRPTAGRLRQCPAARSPECDGRAHVEGEPCQGGAVAGLSRAVRSLVGTVSHVYHWCSSGILQGVVLAKDWLTPELAYRKDLQQTLRRLTSLEAELQALKRITRDGTHQACEGLCPKCAGVCVPCPPPVCAVPPLVSSSLPPQAPPPPPPPPPLPPPPTAQPRLVLKRKAAVQRPTQRDCTAVVTVKDLLRVKLRKTSTEAEDEKRDASEWKKALVTVRDLQAVSLRRTVSESCAQTMLSPRGCRQTPNKTPYNLRGLLKRVDIIRSPGGTPMYDKENRETGTGLTPIMTQALRKKFKSLHADRSPSPAGKYSPNNSFEDLMQ
SIO_010081: PRR11
subclass of: SO_0000673
so part of: PRR11
location: join(986772..986872,988813..988954,990335..990457,991609..991815,993326..993424,994709..994824,995413..995475,996225..996321,996840..996917)
location: region:986772-996917:1
so has part: feature:986772-986872:1:exon
so has part: feature:988813-988954:1:exon
so has part: feature:990335-990457:1:exon
so has part: feature:991609-991815:1:exon
so has part: feature:993326-993424:1:exon
so has part: feature:994709-994824:1:exon
so has part: feature:995413-995475:1:exon
so has part: feature:996225-996321:1:exon
so has part: feature:996840-996917:1:exon

XP_032823437.1
type: Protein
SIO_000068: ncbiprotein

position:986772:1
position: 986772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:996917:1
position: 996917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:986772-986872:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:988813-988954:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:990335-990457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:991609-991815:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:993326-993424:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:994709-994824:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:995413-995475:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:996225-996321:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:996840-996917:1:exon

SMG8
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: SMG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1000995..1019110
location: region:1000995-1019110:1
so has part: feature:1000995-1019110:1:exon
subclass of: SO_0000010

116950099
type: Gene
SIO_000068: ncbigene

position:1000995:1
position: 1000995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1019110:1
position: 1019110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1000995-1019110:1:exon

SMG8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: SMG8
product: SMG8 nonsense mediated mRNA decay factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_032967547.1
SIO_010081: SMG8
subclass of: SO_0000673
so part of: SMG8
location: join(1000995..1001172,1002667..1003173,1003599..1003999,1004769..1005177,1006747..1006922,1007767..1007918,1010985..1011130,1012283..1013015,1013491..1013617,1016147..1016396,1016874..1019110)
location: region:1000995-1019110:1
so has part: feature:1000995-1001172:1:exon
so has part: feature:1002667-1003173:1:exon
so has part: feature:1003599-1003999:1:exon
so has part: feature:1004769-1005177:1:exon
so has part: feature:1006747-1006922:1:exon
so has part: feature:1007767-1007918:1:exon
so has part: feature:1010985-1011130:1:exon
so has part: feature:1012283-1013015:1:exon
so has part: feature:1013491-1013617:1:exon
so has part: feature:1016147-1016396:1:exon
so has part: feature:1016874-1019110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1000995-1001172:1:exon

position:1001172:1
position: 1001172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1002667-1003173:1:exon

position:1002667:1
position: 1002667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003173:1
position: 1003173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1003599-1003999:1:exon

position:1003599:1
position: 1003599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003999:1
position: 1003999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1004769-1005177:1:exon

position:1004769:1
position: 1004769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1005177:1
position: 1005177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1006747-1006922:1:exon

position:1006747:1
position: 1006747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006922:1
position: 1006922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1007767-1007918:1:exon

position:1007767:1
position: 1007767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007918:1
position: 1007918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1010985-1011130:1:exon

position:1010985:1
position: 1010985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011130:1
position: 1011130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1012283-1013015:1:exon

position:1012283:1
position: 1012283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013015:1
position: 1013015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1013491-1013617:1:exon

position:1013491:1
position: 1013491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013617:1
position: 1013617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1016147-1016396:1:exon

position:1016147:1
position: 1016147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016396:1
position: 1016396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1016874-1019110:1:exon

position:1016874:1
position: 1016874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMG8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: SMG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SMG8
translation: MHPPSLESLLAAAGADDAGDEVCVIGVCGLASPSRSNYGHTIVNILTDRLVFPVWHDSAAAAAGVAAPVEAHYDRENRTVYLVVSSASPAGLLRASVTAGDRHAETHAAWRRAEKQHCLAMLFVLSVSHIVLLQHPTCTFDITYDRLFRALDQLRQKLQPQLRALLQDCPVGKEWQLNCRPCPPRLLFIFQLNGALRASDAGLWREGDSPATAAGAATKLKRHSPKRRLQHALEDQIYHVFRKSRLLTNQSVNCLFTVPANQAFVYVMAEPPDDPVGSLIRCLRSNCSLKEGDGQNAGPRRYQLMRRSARPSALPPAPPPPLESQSSGSLPADPTLREFVWQHAELVFARRGFDDSVGRNPQPAHFELPTLANWAAVAGRLSGALLGTSSGAWGEVAEVSDGKDDDDEEDDEEEDDGGGDDGVDGKTPADPVSVHAKVQSQLKCLEGFLDADTRFSESRCQKALPLAHSAYQAGLPHHYTSAYHRSQLAHALSIYRQHARGPAYQAYLLKLQEDCHAFWQAGHQLCEERSLTDQHCIHKYHLLPKAGELADPDQVPPVVPHCSRSRATSTCNCGSHQGTREDPFTLRAANFTFYETMEDKYCGKLEHFAFPTFGRDTGVSRKNSLNANAAPAPVSTEDALYKDAPEATGGTECSPDLPHGLGQAAGTPGGLLAELQAGTAAVAGPAQSQPGLGHVHSRPPAAVSQPAHAHSQPAPATHGDQNDAHPCRARSQSGPTAHNEGGELEPGERPAPNLEEKSPLQDDQDQQQQQQQPLVGMVHLGGVVAGRLPSFSSWSLVRLGPAKAYVPSQGLTDMPGFVPGTHFLMPWDVPLSSTRRSNEGEEEEAWPAIRTEGAERAERAEGESWRGFAPTRTWRRGDNTARAYVGYEYEDSRGRRFMCSAPDKVMKVAPGSGYRDFASRALAADMPLYVAASGQSRGPKPALAQLMRLYVVVPDASVRLLLAPQVQPGSAPCPIFVPEQREVTLPTDGLWVLRLPMAYGSERGPCLPPRDTQGLSAYRLLRGVLRAET
SIO_010081: SMG8
subclass of: SO_0000673
so part of: SMG8
location: join(1002673..1003173,1003599..1003999,1004769..1005177,1006747..1006922,1007767..1007918,1010985..1011130,1012283..1013015,1013491..1013617,1016147..1016396,1016874..1017068)
location: region:1002673-1017068:1
so has part: feature:1002673-1003173:1:exon
so has part: feature:1003599-1003999:1:exon
so has part: feature:1004769-1005177:1:exon
so has part: feature:1006747-1006922:1:exon
so has part: feature:1007767-1007918:1:exon
so has part: feature:1010985-1011130:1:exon
so has part: feature:1012283-1013015:1:exon
so has part: feature:1013491-1013617:1:exon
so has part: feature:1016147-1016396:1:exon
so has part: feature:1016874-1017068:1:exon

XP_032823438.1
type: Protein
SIO_000068: ncbiprotein

position:1002673:1
position: 1002673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1017068:1
position: 1017068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002673-1003173:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1003599-1003999:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004769-1005177:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1006747-1006922:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1007767-1007918:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1010985-1011130:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1012283-1013015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1013491-1013617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1016147-1016396:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1016874-1017068:1:exon

NUDT9
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: NUDT9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1020798..1035784)
location: region:1020798-1035784:-1
so has part: feature:1020798-1035784:-1:exon
subclass of: SO_0000010

116950100
type: Gene
SIO_000068: ncbigene

position:1020798:-1
position: 1020798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1035784:-1
position: 1035784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020798-1035784:-1:exon

NUDT9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: NUDT9
product: nudix hydrolase 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_032967548.1
SIO_010081: NUDT9
subclass of: SO_0000673
so part of: NUDT9
location: complement(join(1020798..1022150,1023532..1023616,1025232..1025375,1025870..1025972,1027053..1027139,1030492..1030593,1031288..1031602,1035642..1035784))
location: region:1020798-1035784:-1
so has part: feature:1035642-1035784:-1:exon
so has part: feature:1031288-1031602:-1:exon
so has part: feature:1030492-1030593:-1:exon
so has part: feature:1027053-1027139:-1:exon
so has part: feature:1025870-1025972:-1:exon
so has part: feature:1025232-1025375:-1:exon
so has part: feature:1023532-1023616:-1:exon
so has part: feature:1020798-1022150:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1035642-1035784:-1:exon

position:1035642:-1
position: 1035642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1031288-1031602:-1:exon

position:1031288:-1
position: 1031288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031602:-1
position: 1031602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1030492-1030593:-1:exon

position:1030492:-1
position: 1030492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030593:-1
position: 1030593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1027053-1027139:-1:exon

position:1027053:-1
position: 1027053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027139:-1
position: 1027139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1025870-1025972:-1:exon

position:1025870:-1
position: 1025870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025972:-1
position: 1025972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1025232-1025375:-1:exon

position:1025232:-1
position: 1025232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025375:-1
position: 1025375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1023532-1023616:-1:exon

position:1023532:-1
position: 1023532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023616:-1
position: 1023616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1020798-1022150:-1:exon

position:1022150:-1
position: 1022150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NUDT9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: NUDT9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribose pyrophosphatase, mitochondrial
translation: MRKRLLVVVVAAAARPLLPLLPLHALSALSALSACRVDASVGSFLSGQWCGASTARGAMAAAPPPPPRSCSAAGRDALAAGGCAPLNVKCRGGLYSGSTVKRFPVPDDHVAWGTAFPEYAPKEYTAPAVLAGPVWADPQHTEGWGGRPPKFNELDGKIDRRSHMGRYEVIDGLSRNPIGRTGIKGRGLLGRWGPNHAADPIVTRWKRVGGVVEKKDGKPILQFVAIKRKDNNEWAIPGGMVDAGEKVSLTLRREFGEEALNSLQLSGADRKHLQEQINKLFSAGEMVYKGYVDDPRNTDNAWMETVAVTFHDENGENVGRLPFQAGDDAVGVKWVDVHSAIKLYASHTLFLQKTAELRHAHW
SIO_010081: NUDT9
subclass of: SO_0000673
so part of: NUDT9
location: complement(join(1022005..1022150,1023532..1023616,1025232..1025375,1025870..1025972,1027053..1027139,1030492..1030593,1031288..1031602,1035642..1035748))
location: region:1022005-1035748:-1
so has part: feature:1035642-1035748:-1:exon
so has part: feature:1031288-1031602:-1:exon
so has part: feature:1030492-1030593:-1:exon
so has part: feature:1027053-1027139:-1:exon
so has part: feature:1025870-1025972:-1:exon
so has part: feature:1025232-1025375:-1:exon
so has part: feature:1023532-1023616:-1:exon
so has part: feature:1022005-1022150:-1:exon

XP_032823439.1
type: Protein
SIO_000068: ncbiprotein

position:1022005:-1
position: 1022005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1035748:-1
position: 1035748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1035642-1035748:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1031288-1031602:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1030492-1030593:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1027053-1027139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1025870-1025972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025232-1025375:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1023532-1023616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1022005-1022150:-1:exon

LOC116950101
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1054338..1097783
location: region:1054338-1097783:1
so has part: feature:1054338-1097783:1:exon
subclass of: SO_0000010

116950101
type: Gene
SIO_000068: ncbigene

position:1054338:1
position: 1054338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1097783:1
position: 1097783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054338-1097783:1:exon

LOC116950101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950101
product: cadherin-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032967549.1
SIO_010081: LOC116950101
subclass of: SO_0000673
so part of: LOC116950101
location: join(1054338..1054667,1068150..1068207,1069755..1069933,1071872..1072030,1072613..1072757,1073692..1073864,1074754..1074888,1075389..1075574,1076256..1076506,1079701..1079843,1081893..1082129,1083476..1083709,1091382..1091524,1093757..1094494,1095399..1097783)
location: region:1054338-1097783:1
so has part: feature:1054338-1054667:1:exon
so has part: feature:1068150-1068207:1:exon
so has part: feature:1069755-1069933:1:exon
so has part: feature:1071872-1072030:1:exon
so has part: feature:1072613-1072757:1:exon
so has part: feature:1073692-1073864:1:exon
so has part: feature:1074754-1074888:1:exon
so has part: feature:1075389-1075574:1:exon
so has part: feature:1076256-1076506:1:exon
so has part: feature:1079701-1079843:1:exon
so has part: feature:1081893-1082129:1:exon
so has part: feature:1083476-1083709:1:exon
so has part: feature:1091382-1091524:1:exon
so has part: feature:1093757-1094494:1:exon
so has part: feature:1095399-1097783:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1054338-1054667:1:exon

position:1054667:1
position: 1054667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1068150-1068207:1:exon

position:1068150:1
position: 1068150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068207:1
position: 1068207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1069755-1069933:1:exon

position:1069755:1
position: 1069755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069933:1
position: 1069933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1071872-1072030:1:exon

position:1071872:1
position: 1071872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072030:1
position: 1072030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1072613-1072757:1:exon

position:1072613:1
position: 1072613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072757:1
position: 1072757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1073692-1073864:1:exon

position:1073692:1
position: 1073692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073864:1
position: 1073864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1074754-1074888:1:exon

position:1074754:1
position: 1074754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074888:1
position: 1074888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1075389-1075574:1:exon

position:1075389:1
position: 1075389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075574:1
position: 1075574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1076256-1076506:1:exon

position:1076256:1
position: 1076256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076506:1
position: 1076506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1079701-1079843:1:exon

position:1079701:1
position: 1079701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079843:1
position: 1079843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1081893-1082129:1:exon

position:1081893:1
position: 1081893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082129:1
position: 1082129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1083476-1083709:1:exon

position:1083476:1
position: 1083476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083709:1
position: 1083709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1091382-1091524:1:exon

position:1091382:1
position: 1091382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091524:1
position: 1091524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1093757-1094494:1:exon

position:1093757:1
position: 1093757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094494:1
position: 1094494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1095399-1097783:1:exon

position:1095399:1
position: 1095399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116950101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-2-like
translation: MSRGVWSGRALLCALILLQVCSRVHGGHQVARRTPISAANATQEHGHSRQTKAAPKNGWHQWAIEPAGRQKRSWILPPIKVNHVIENDRGPFPKVFMMIRSDKESSVNSMVYSLRGPGADQPPVGVFNIDPITGKINIMFVLDREKISSYALKGFAKDERGNLLEPELDLPINVLDENDNAPEFTQMRYAGNVSEKSRAGSPVLKVEATDADDPQTNHVQVVFSIIAQQPPLPSTRMFTIDRSSGLISTGATRFDAEAVKFYTLLIRASDCNGADYSLSSTGTVVIQVQDVNDNAPVYSQQNLICTVLENVVGESVLALKAEDGDTPHTPAWRVRYRIVAGQHSDSFHIATDYVTNEGILTVSKALDYESTKQVLLVVRVENEEPLWGVQPGPASTATVTVTVRDQNEPPEFSPDEIEAAVTEEQPPGVTLGVFTARDPDVGQHQQIRYKMGDDPSGWLSVNPTTGELRTRARLDREASGLYNGTYTATILAFDNGVPPQTGTVTILLRVTDVNDHPPRVKLPYSHRVCEDLAWQGINVTVLDEDEAPNAGPFTFSLPEEPPEIRNNWNILYRTGEVLVLAPHSDRVQPGHYSVPVLLADKSGLRSEQIVEVTICYCDNKLTCPAALGGIGLSLAALLIIIFCLLILLLLFLAMLCCLWCYPHGCCGYVRSGGALYIVHEQGNSGGVQAYNYEGGGEEDMGMRMNLLAIGAQGKNGSSWAGGKDAEGAAYTKSTTLRASSAAESSHAAAAAAAAAAGETAAASHEVKESFTASFSHTTSGAAHDSAGTRAHGGRSAGSAGDAAVGGSDAWAAAGGGGGGGVVVSHVATHTEVGSASSSSSGGRGIAMDSRVNGAFRAPAGGATGGIVLETDGRVYLGRTSTLGYPRASGYGGQAIGRESVSVGRGITRREVPPPAAVAGPAWLQHHTLPKLLSTKATADVRQFVAEALEWADKDPAVPTFDGLLVFCHEGDREDDHSFSPCISTANLAEQEAQFRPVFNPPPGSYGSRGSPISRAATPAAASPSRQLP
SIO_010081: LOC116950101
subclass of: SO_0000673
so part of: LOC116950101
location: join(1054611..1054667,1068150..1068207,1069755..1069933,1071872..1072030,1072613..1072757,1073692..1073864,1074754..1074888,1075389..1075574,1076256..1076506,1079701..1079843,1081893..1082129,1083476..1083709,1091382..1091524,1093757..1094494,1095399..1095647)
location: region:1054611-1095647:1
so has part: feature:1054611-1054667:1:exon
so has part: feature:1068150-1068207:1:exon
so has part: feature:1069755-1069933:1:exon
so has part: feature:1071872-1072030:1:exon
so has part: feature:1072613-1072757:1:exon
so has part: feature:1073692-1073864:1:exon
so has part: feature:1074754-1074888:1:exon
so has part: feature:1075389-1075574:1:exon
so has part: feature:1076256-1076506:1:exon
so has part: feature:1079701-1079843:1:exon
so has part: feature:1081893-1082129:1:exon
so has part: feature:1083476-1083709:1:exon
so has part: feature:1091382-1091524:1:exon
so has part: feature:1093757-1094494:1:exon
so has part: feature:1095399-1095647:1:exon

XP_032823440.1
type: Protein
SIO_000068: ncbiprotein

position:1054611:1
position: 1054611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095647:1
position: 1095647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054611-1054667:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1068150-1068207:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069755-1069933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1071872-1072030:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072613-1072757:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1073692-1073864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1074754-1074888:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075389-1075574:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1076256-1076506:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1079701-1079843:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1081893-1082129:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1083476-1083709:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1091382-1091524:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1093757-1094494:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1095399-1095647:1:exon

CLP1
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: CLP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1099433..1108990)
location: region:1099433-1108990:-1
so has part: feature:1099433-1108990:-1:exon
subclass of: SO_0000010

116950102
type: Gene
SIO_000068: ncbigene

position:1099433:-1
position: 1099433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108990:-1
position: 1108990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1099433-1108990:-1:exon

CLP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: CLP1
product: cleavage factor polyribonucleotide kinase subunit 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_032967553.1
SIO_010081: CLP1
subclass of: SO_0000673
so part of: CLP1
location: complement(join(1099433..1102469,1103832..1104065,1104511..1104654,1105253..1105603,1106555..1106822,1108882..1108990))
location: region:1099433-1108990:-1
so has part: feature:1108882-1108990:-1:exon
so has part: feature:1106555-1106822:-1:exon
so has part: feature:1105253-1105603:-1:exon
so has part: feature:1104511-1104654:-1:exon
so has part: feature:1103832-1104065:-1:exon
so has part: feature:1099433-1102469:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1108882-1108990:-1:exon

position:1108882:-1
position: 1108882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1106555-1106822:-1:exon

position:1106555:-1
position: 1106555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106822:-1
position: 1106822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1105253-1105603:-1:exon

position:1105253:-1
position: 1105253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105603:-1
position: 1105603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1104511-1104654:-1:exon

position:1104511:-1
position: 1104511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104654:-1
position: 1104654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1103832-1104065:-1:exon

position:1103832:-1
position: 1103832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104065:-1
position: 1104065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1099433-1102469:-1:exon

position:1102469:-1
position: 1102469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: CLP1
product: cleavage factor polyribonucleotide kinase subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_032967550.1
SIO_010081: CLP1
subclass of: SO_0000673
so part of: CLP1
location: complement(join(1099433..1102469,1103832..1104065,1104511..1104654,1105253..1105603,1106555..1106822,1107731..1107843,1108882..1108989))
location: region:1099433-1108989:-1
so has part: feature:1108882-1108989:-1:exon
so has part: feature:1107731-1107843:-1:exon
so has part: feature:1106555-1106822:-1:exon
so has part: feature:1105253-1105603:-1:exon
so has part: feature:1104511-1104654:-1:exon
so has part: feature:1103832-1104065:-1:exon
so has part: feature:1099433-1102469:-1:exon

position:1108989:-1
position: 1108989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1108882-1108989:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1107731-1107843:-1:exon

position:1107731:-1
position: 1107731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1107843:-1
position: 1107843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1106555-1106822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1105253-1105603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1104511-1104654:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1103832-1104065:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1099433-1102469:-1:exon

CLP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: CLP1
product: cleavage factor polyribonucleotide kinase subunit 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032967554.1
SIO_010081: CLP1
subclass of: SO_0000673
so part of: CLP1
location: complement(join(1099433..1102469,1103832..1104065,1104511..1104654,1105253..1105603,1106555..1106822,1108569..1108872))
location: region:1099433-1108872:-1
so has part: feature:1108569-1108872:-1:exon
so has part: feature:1106555-1106822:-1:exon
so has part: feature:1105253-1105603:-1:exon
so has part: feature:1104511-1104654:-1:exon
so has part: feature:1103832-1104065:-1:exon
so has part: feature:1099433-1102469:-1:exon

position:1108872:-1
position: 1108872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1108569-1108872:-1:exon

position:1108569:-1
position: 1108569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1106555-1106822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1105253-1105603:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1104511-1104654:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1103832-1104065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1099433-1102469:-1:exon

CLP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: CLP1
product: cleavage factor polyribonucleotide kinase subunit 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032967552.1
SIO_010081: CLP1
subclass of: SO_0000673
so part of: CLP1
location: complement(join(1099433..1102469,1103832..1104065,1104511..1104654,1105253..1105603,1106555..1106822,1107731..1107843,1108569..1108871))
location: region:1099433-1108871:-1
so has part: feature:1108569-1108871:-1:exon
so has part: feature:1107731-1107843:-1:exon
so has part: feature:1106555-1106822:-1:exon
so has part: feature:1105253-1105603:-1:exon
so has part: feature:1104511-1104654:-1:exon
so has part: feature:1103832-1104065:-1:exon
so has part: feature:1099433-1102469:-1:exon

position:1108871:-1
position: 1108871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1108569-1108871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1107731-1107843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1106555-1106822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1105253-1105603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1104511-1104654:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1103832-1104065:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1099433-1102469:-1:exon

CLP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: CLP1
product: cleavage factor polyribonucleotide kinase subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032967551.1
SIO_010081: CLP1
subclass of: SO_0000673
so part of: CLP1
location: complement(join(1099433..1102469,1103832..1104065,1104511..1104654,1105253..1105603,1106555..1106822,1107731..1107843,1108565..1108871))
location: region:1099433-1108871:-1
so has part: feature:1108565-1108871:-1:exon
so has part: feature:1107731-1107843:-1:exon
so has part: feature:1106555-1106822:-1:exon
so has part: feature:1105253-1105603:-1:exon
so has part: feature:1104511-1104654:-1:exon
so has part: feature:1103832-1104065:-1:exon
so has part: feature:1099433-1102469:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1108565-1108871:-1:exon

position:1108565:-1
position: 1108565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1107731-1107843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1106555-1106822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1105253-1105603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1104511-1104654:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1103832-1104065:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1099433-1102469:-1:exon

CLP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: CLP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1
translation: MGRRRRKSPVCRRAEGTSERGFERATMSEEKDDRPMQKFDLEKEMELRFEVEPQQTATLELLSGMGEIFGTELTRNKRYVFDAGSKVAVFTWHGCSVQLTGLTEVAYVAKETPMLLYLNVHAALEQMRVQAERQEEERGPRVMVAGPGDVGKSTLCRLLCSYAARLGRRPTLVELDVGQGSVSIPGTLALLYIERPADTEEGFNLQAPLVYHFGSTTPSSNVKLYNKVVSKLADVFDQRCKVNRRAAISGCVINTCGWVKGAGYQALIHAATAFEVDVILVLDQERLYTELKRDLPHFVKTVLLPKSGGVVERSKDFRREGRDELVRRYFYGFRNAYFPHAFDVKFSDVKLYKVGAPPIPDSCLPLGMSQEENQLKVVPITPGRDLVHHVLSLSMAESTQENLVEASVAGFLVVTAVDSERQVFTVLSPAPRPLPRSILLVMDIRFMDLK
SIO_010081: CLP1
subclass of: SO_0000673
so part of: CLP1
location: complement(join(1102176..1102469,1103832..1104065,1104511..1104654,1105253..1105603,1106555..1106822,1107731..1107792))
location: region:1102176-1107792:-1
so has part: feature:1107731-1107792:-1:exon
so has part: feature:1106555-1106822:-1:exon
so has part: feature:1105253-1105603:-1:exon
so has part: feature:1104511-1104654:-1:exon
so has part: feature:1103832-1104065:-1:exon
so has part: feature:1102176-1102469:-1:exon

XP_032823441.1
type: Protein
SIO_000068: ncbiprotein

position:1102176:-1
position: 1102176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1107792:-1
position: 1107792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1107731-1107792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1106555-1106822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1105253-1105603:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1104511-1104654:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1103832-1104065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1102176-1102469:-1:exon

CLP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: CLP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1
translation: MGRRRRKSPVCRRAEGTSERGFERATMSEEKDDRPMQKFDLEKEMELRFEVEPQQTATLELLSGMGEIFGTELTRNKRYVFDAGSKVAVFTWHGCSVQLTGLTEVAYVAKETPMLLYLNVHAALEQMRVQAERQEEERGPRVMVAGPGDVGKSTLCRLLCSYAARLGRRPTLVELDVGQGSVSIPGTLALLYIERPADTEEGFNLQAPLVYHFGSTTPSSNVKLYNKVVSKLADVFDQRCKVNRRAAISGCVINTCGWVKGAGYQALIHAATAFEVDVILVLDQERLYTELKRDLPHFVKTVLLPKSGGVVERSKDFRREGRDELVRRYFYGFRNAYFPHAFDVKFSDVKLYKVGAPPIPDSCLPLGMSQEENQLKVVPITPGRDLVHHVLSLSMAESTQENLVEASVAGFLVVTAVDSERQVFTVLSPAPRPLPRSILLVMDIRFMDLK
SIO_010081: CLP1
subclass of: SO_0000673
so part of: CLP1
location: complement(join(1102176..1102469,1103832..1104065,1104511..1104654,1105253..1105603,1106555..1106822,1107731..1107792))
location: region:1102176-1107792:-1
so has part: feature:1107731-1107792:-1:exon
so has part: feature:1106555-1106822:-1:exon
so has part: feature:1105253-1105603:-1:exon
so has part: feature:1104511-1104654:-1:exon
so has part: feature:1103832-1104065:-1:exon
so has part: feature:1102176-1102469:-1:exon

XP_032823442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1107731-1107792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1106555-1106822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1105253-1105603:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1104511-1104654:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1103832-1104065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1102176-1102469:-1:exon

CLP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: CLP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1
translation: MGRRRRKSPVCRRAEGTSERGFERATMSEEKDDRPMQKFDLEKEMELRFEVEPQQTATLELLSGMGEIFGTELTRNKRYVFDAGSKVAVFTWHGCSVQLTGLTEVAYVAKETPMLLYLNVHAALEQMRVQAERQEEERGPRVMVAGPGDVGKSTLCRLLCSYAARLGRRPTLVELDVGQGSVSIPGTLALLYIERPADTEEGFNLQAPLVYHFGSTTPSSNVKLYNKVVSKLADVFDQRCKVNRRAAISGCVINTCGWVKGAGYQALIHAATAFEVDVILVLDQERLYTELKRDLPHFVKTVLLPKSGGVVERSKDFRREGRDELVRRYFYGFRNAYFPHAFDVKFSDVKLYKVGAPPIPDSCLPLGMSQEENQLKVVPITPGRDLVHHVLSLSMAESTQENLVEASVAGFLVVTAVDSERQVFTVLSPAPRPLPRSILLVMDIRFMDLK
SIO_010081: CLP1
subclass of: SO_0000673
so part of: CLP1
location: complement(join(1102176..1102469,1103832..1104065,1104511..1104654,1105253..1105603,1106555..1106822,1107731..1107792))
location: region:1102176-1107792:-1
so has part: feature:1107731-1107792:-1:exon
so has part: feature:1106555-1106822:-1:exon
so has part: feature:1105253-1105603:-1:exon
so has part: feature:1104511-1104654:-1:exon
so has part: feature:1103832-1104065:-1:exon
so has part: feature:1102176-1102469:-1:exon

XP_032823443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1107731-1107792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1106555-1106822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1105253-1105603:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1104511-1104654:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1103832-1104065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1102176-1102469:-1:exon

CLP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: CLP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X2
translation: MSEEKDDRPMQKFDLEKEMELRFEVEPQQTATLELLSGMGEIFGTELTRNKRYVFDAGSKVAVFTWHGCSVQLTGLTEVAYVAKETPMLLYLNVHAALEQMRVQAERQEEERGPRVMVAGPGDVGKSTLCRLLCSYAARLGRRPTLVELDVGQGSVSIPGTLALLYIERPADTEEGFNLQAPLVYHFGSTTPSSNVKLYNKVVSKLADVFDQRCKVNRRAAISGCVINTCGWVKGAGYQALIHAATAFEVDVILVLDQERLYTELKRDLPHFVKTVLLPKSGGVVERSKDFRREGRDELVRRYFYGFRNAYFPHAFDVKFSDVKLYKVGAPPIPDSCLPLGMSQEENQLKVVPITPGRDLVHHVLSLSMAESTQENLVEASVAGFLVVTAVDSERQVFTVLSPAPRPLPRSILLVMDIRFMDLK
SIO_010081: CLP1
subclass of: SO_0000673
so part of: CLP1
location: complement(join(1102176..1102469,1103832..1104065,1104511..1104654,1105253..1105603,1106555..1106806))
location: region:1102176-1106806:-1
so has part: feature:1106555-1106806:-1:exon
so has part: feature:1105253-1105603:-1:exon
so has part: feature:1104511-1104654:-1:exon
so has part: feature:1103832-1104065:-1:exon
so has part: feature:1102176-1102469:-1:exon

XP_032823444.1
type: Protein
SIO_000068: ncbiprotein

position:1106806:-1
position: 1106806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1106555-1106806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1105253-1105603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1104511-1104654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1103832-1104065:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1102176-1102469:-1:exon

CLP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: CLP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X2
translation: MSEEKDDRPMQKFDLEKEMELRFEVEPQQTATLELLSGMGEIFGTELTRNKRYVFDAGSKVAVFTWHGCSVQLTGLTEVAYVAKETPMLLYLNVHAALEQMRVQAERQEEERGPRVMVAGPGDVGKSTLCRLLCSYAARLGRRPTLVELDVGQGSVSIPGTLALLYIERPADTEEGFNLQAPLVYHFGSTTPSSNVKLYNKVVSKLADVFDQRCKVNRRAAISGCVINTCGWVKGAGYQALIHAATAFEVDVILVLDQERLYTELKRDLPHFVKTVLLPKSGGVVERSKDFRREGRDELVRRYFYGFRNAYFPHAFDVKFSDVKLYKVGAPPIPDSCLPLGMSQEENQLKVVPITPGRDLVHHVLSLSMAESTQENLVEASVAGFLVVTAVDSERQVFTVLSPAPRPLPRSILLVMDIRFMDLK
SIO_010081: CLP1
subclass of: SO_0000673
so part of: CLP1
location: complement(join(1102176..1102469,1103832..1104065,1104511..1104654,1105253..1105603,1106555..1106806))
location: region:1102176-1106806:-1
so has part: feature:1106555-1106806:-1:exon
so has part: feature:1105253-1105603:-1:exon
so has part: feature:1104511-1104654:-1:exon
so has part: feature:1103832-1104065:-1:exon
so has part: feature:1102176-1102469:-1:exon

XP_032823445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1106555-1106806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1105253-1105603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1104511-1104654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1103832-1104065:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1102176-1102469:-1:exon

LOC116950104
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1125177..1143765
location: region:1125177-1143765:1
so has part: feature:1125177-1143765:1:exon
subclass of: SO_0000010

116950104
type: Gene
SIO_000068: ncbigene

position:1125177:1
position: 1125177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143765:1
position: 1143765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1125177-1143765:1:exon

LOC116950104
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950104
product: fructose-bisphosphate aldolase, muscle type, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 68 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_032967555.1
SIO_010081: LOC116950104
subclass of: SO_0000673
so part of: LOC116950104
location: join(1125177..1125309,1135579..1135713,1136745..1136956,1137545..1137599,1138887..1139047,1140452..1140535,1140695..1140869,1141956..1142155,1142599..1143765)
location: region:1125177-1143765:1
so has part: feature:1125177-1125309:1:exon
so has part: feature:1135579-1135713:1:exon
so has part: feature:1136745-1136956:1:exon
so has part: feature:1137545-1137599:1:exon
so has part: feature:1138887-1139047:1:exon
so has part: feature:1140452-1140535:1:exon
so has part: feature:1140695-1140869:1:exon
so has part: feature:1141956-1142155:1:exon
so has part: feature:1142599-1143765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125177-1125309:1:exon

position:1125309:1
position: 1125309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1135579-1135713:1:exon

position:1135579:1
position: 1135579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1135713:1
position: 1135713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1136745-1136956:1:exon

position:1136745:1
position: 1136745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136956:1
position: 1136956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1137545-1137599:1:exon

position:1137545:1
position: 1137545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137599:1
position: 1137599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1138887-1139047:1:exon

position:1138887:1
position: 1138887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1139047:1
position: 1139047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1140452-1140535:1:exon

position:1140452:1
position: 1140452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140535:1
position: 1140535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1140695-1140869:1:exon

position:1140695:1
position: 1140695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140869:1
position: 1140869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1141956-1142155:1:exon

position:1141956:1
position: 1141956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142155:1
position: 1142155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1142599-1143765:1:exon

position:1142599:1
position: 1142599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116950104
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950104
product: fructose-bisphosphate aldolase, muscle type, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 53 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_032967556.1
SIO_010081: LOC116950104
subclass of: SO_0000673
so part of: LOC116950104
location: join(1132150..1132301,1135579..1135713,1136745..1136956,1137545..1137599,1138887..1139047,1140452..1140535,1140695..1140869,1141956..1142155,1142599..1143765)
location: region:1132150-1143765:1
so has part: feature:1132150-1132301:1:exon
so has part: feature:1135579-1135713:1:exon
so has part: feature:1136745-1136956:1:exon
so has part: feature:1137545-1137599:1:exon
so has part: feature:1138887-1139047:1:exon
so has part: feature:1140452-1140535:1:exon
so has part: feature:1140695-1140869:1:exon
so has part: feature:1141956-1142155:1:exon
so has part: feature:1142599-1143765:1:exon

position:1132150:1
position: 1132150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132150-1132301:1:exon

position:1132301:1
position: 1132301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1135579-1135713:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1136745-1136956:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137545-1137599:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1138887-1139047:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1140452-1140535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1140695-1140869:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1141956-1142155:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1142599-1143765:1:exon

LOC116950104
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950104
product: fructose-bisphosphate aldolase, muscle type, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 54 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_032967557.1
SIO_010081: LOC116950104
subclass of: SO_0000673
so part of: LOC116950104
location: join(1135049..1135117,1135579..1135713,1136745..1136956,1137545..1137599,1138887..1139047,1140452..1140535,1140695..1140869,1141956..1142155,1142599..1143765)
location: region:1135049-1143765:1
so has part: feature:1135049-1135117:1:exon
so has part: feature:1135579-1135713:1:exon
so has part: feature:1136745-1136956:1:exon
so has part: feature:1137545-1137599:1:exon
so has part: feature:1138887-1139047:1:exon
so has part: feature:1140452-1140535:1:exon
so has part: feature:1140695-1140869:1:exon
so has part: feature:1141956-1142155:1:exon
so has part: feature:1142599-1143765:1:exon

position:1135049:1
position: 1135049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1135049-1135117:1:exon

position:1135117:1
position: 1135117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1135579-1135713:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1136745-1136956:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137545-1137599:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1138887-1139047:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1140452-1140535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1140695-1140869:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1141956-1142155:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1142599-1143765:1:exon

LOC116950104
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fructose-bisphosphate aldolase, muscle type
translation: MSPHFPALTPDQKKELADIAQRIVASGKGILAADESVGTMGKRLTQIGLENTDEHRRFYRQLLFTTDPSIKESIGGIIFFHETLYQKSDSGVPFVKLVKDNGILVGIKVDKGVVPLAGTNGEGTTQGLDGLAERCAQYKKDGADFAKWRCVLKISPNTPSNLSIIENANVLARYATICQQNGLVPIVEPEILPDGDHDLKTCQYITEKVLAATYKALSDHHVYLEGTLLKPNMVTAGHACATKYTPEQVGMATLTALRRTVPPAVPGITFLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYKPIAGSGAAAGESLFVANHAY
SIO_010081: LOC116950104
subclass of: SO_0000673
so part of: LOC116950104
location: join(1135602..1135713,1136745..1136956,1137545..1137599,1138887..1139047,1140452..1140535,1140695..1140869,1141956..1142155,1142599..1142694)
location: region:1135602-1142694:1
so has part: feature:1135602-1135713:1:exon
so has part: feature:1136745-1136956:1:exon
so has part: feature:1137545-1137599:1:exon
so has part: feature:1138887-1139047:1:exon
so has part: feature:1140452-1140535:1:exon
so has part: feature:1140695-1140869:1:exon
so has part: feature:1141956-1142155:1:exon
so has part: feature:1142599-1142694:1:exon

XP_032823446.1
type: Protein
SIO_000068: ncbiprotein

position:1135602:1
position: 1135602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142694:1
position: 1142694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1135602-1135713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1136745-1136956:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137545-1137599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1138887-1139047:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140452-1140535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1140695-1140869:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1141956-1142155:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1142599-1142694:1:exon

LOC116950104
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fructose-bisphosphate aldolase, muscle type
translation: MSPHFPALTPDQKKELADIAQRIVASGKGILAADESVGTMGKRLTQIGLENTDEHRRFYRQLLFTTDPSIKESIGGIIFFHETLYQKSDSGVPFVKLVKDNGILVGIKVDKGVVPLAGTNGEGTTQGLDGLAERCAQYKKDGADFAKWRCVLKISPNTPSNLSIIENANVLARYATICQQNGLVPIVEPEILPDGDHDLKTCQYITEKVLAATYKALSDHHVYLEGTLLKPNMVTAGHACATKYTPEQVGMATLTALRRTVPPAVPGITFLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYKPIAGSGAAAGESLFVANHAY
SIO_010081: LOC116950104
subclass of: SO_0000673
so part of: LOC116950104
location: join(1135602..1135713,1136745..1136956,1137545..1137599,1138887..1139047,1140452..1140535,1140695..1140869,1141956..1142155,1142599..1142694)
location: region:1135602-1142694:1
so has part: feature:1135602-1135713:1:exon
so has part: feature:1136745-1136956:1:exon
so has part: feature:1137545-1137599:1:exon
so has part: feature:1138887-1139047:1:exon
so has part: feature:1140452-1140535:1:exon
so has part: feature:1140695-1140869:1:exon
so has part: feature:1141956-1142155:1:exon
so has part: feature:1142599-1142694:1:exon

XP_032823447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1135602-1135713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1136745-1136956:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137545-1137599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1138887-1139047:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140452-1140535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1140695-1140869:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1141956-1142155:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1142599-1142694:1:exon

LOC116950104
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fructose-bisphosphate aldolase, muscle type
translation: MSPHFPALTPDQKKELADIAQRIVASGKGILAADESVGTMGKRLTQIGLENTDEHRRFYRQLLFTTDPSIKESIGGIIFFHETLYQKSDSGVPFVKLVKDNGILVGIKVDKGVVPLAGTNGEGTTQGLDGLAERCAQYKKDGADFAKWRCVLKISPNTPSNLSIIENANVLARYATICQQNGLVPIVEPEILPDGDHDLKTCQYITEKVLAATYKALSDHHVYLEGTLLKPNMVTAGHACATKYTPEQVGMATLTALRRTVPPAVPGITFLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYKPIAGSGAAAGESLFVANHAY
SIO_010081: LOC116950104
subclass of: SO_0000673
so part of: LOC116950104
location: join(1135602..1135713,1136745..1136956,1137545..1137599,1138887..1139047,1140452..1140535,1140695..1140869,1141956..1142155,1142599..1142694)
location: region:1135602-1142694:1
so has part: feature:1135602-1135713:1:exon
so has part: feature:1136745-1136956:1:exon
so has part: feature:1137545-1137599:1:exon
so has part: feature:1138887-1139047:1:exon
so has part: feature:1140452-1140535:1:exon
so has part: feature:1140695-1140869:1:exon
so has part: feature:1141956-1142155:1:exon
so has part: feature:1142599-1142694:1:exon

XP_032823448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1135602-1135713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1136745-1136956:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137545-1137599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1138887-1139047:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140452-1140535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1140695-1140869:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1141956-1142155:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1142599-1142694:1:exon

LOC116950296
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950296
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1145706..1156795
location: region:1145706-1156795:1
so has part: feature:1145706-1156795:1:exon
subclass of: SO_0000010

116950296
type: Gene
SIO_000068: ncbigene

position:1145706:1
position: 1145706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156795:1
position: 1156795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1145706-1156795:1:exon

LOC116950296
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950296
product: insulin-like growth factor-binding protein complex acid labile subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032968008.1
SIO_010081: LOC116950296
subclass of: SO_0000673
so part of: LOC116950296
location: join(1145706..1147201,1154218..1155221,1156220..1156795)
location: region:1145706-1156795:1
so has part: feature:1145706-1147201:1:exon
so has part: feature:1154218-1155221:1:exon
so has part: feature:1156220-1156795:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1145706-1147201:1:exon

position:1147201:1
position: 1147201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1154218-1155221:1:exon

position:1154218:1
position: 1154218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155221:1
position: 1155221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1156220-1156795:1:exon

position:1156220:1
position: 1156220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116950296
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950296
product: insulin-like growth factor-binding protein complex acid labile subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032968007.1
SIO_010081: LOC116950296
subclass of: SO_0000673
so part of: LOC116950296
location: join(1145706..1147201,1154235..1155221,1156220..1156795)
location: region:1145706-1156795:1
so has part: feature:1145706-1147201:1:exon
so has part: feature:1154235-1155221:1:exon
so has part: feature:1156220-1156795:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1145706-1147201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1154235-1155221:1:exon

position:1154235:1
position: 1154235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1156220-1156795:1:exon

LOC116950296
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950296
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-like growth factor-binding protein complex acid labile subunit
translation: MARRPEILLLLLVLAAAAASPSLGQTISCPPGCTCSRSKHLVSCHGEALTSLPATLPDNTDMLVVRGSLLTGALTFPCWSHPLDYLEIAGNRAALRLARDSFGNLPQVAVLLFSGNRVAGGLPAGLLAPLKRLRWADLSNNSLAELPGSLFAGASALGYLDLSNNAVASLPPGIFEDLGNLDTLLLSGNNLAALPGTVFGSLRRLETLDLSYNRLGSVSGVHFAALSALKDLRLNGNFIRAIDVAVFRPLASLESLSLAFNAIPSVPSQAFDGLRNLTRLDLAHNNLSAVAQGLLCGMKDLEWLYLAHNSIQEITADIFVENTKLKGVRLEGNALQRLPEQMLQGLASLEELYLNGNRLSELPDGLLAVDKLGVKVPVFLDLSHNELSAVPQGIARLLAQRMFILILHDNPLCSAPAQGPGESHVRKACKLGTRGGTARP
SIO_010081: LOC116950296
subclass of: SO_0000673
so part of: LOC116950296
location: join(1154243..1155221,1156220..1156563)
location: region:1154243-1156563:1
so has part: feature:1154243-1155221:1:exon
so has part: feature:1156220-1156563:1:exon

XP_032823898.1
type: Protein
SIO_000068: ncbiprotein

position:1154243:1
position: 1154243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156563:1
position: 1156563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1154243-1155221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1156220-1156563:1:exon

LOC116950296
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950296
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-like growth factor-binding protein complex acid labile subunit
translation: MARRPEILLLLLVLAAAAASPSLGQTISCPPGCTCSRSKHLVSCHGEALTSLPATLPDNTDMLVVRGSLLTGALTFPCWSHPLDYLEIAGNRAALRLARDSFGNLPQVAVLLFSGNRVAGGLPAGLLAPLKRLRWADLSNNSLAELPGSLFAGASALGYLDLSNNAVASLPPGIFEDLGNLDTLLLSGNNLAALPGTVFGSLRRLETLDLSYNRLGSVSGVHFAALSALKDLRLNGNFIRAIDVAVFRPLASLESLSLAFNAIPSVPSQAFDGLRNLTRLDLAHNNLSAVAQGLLCGMKDLEWLYLAHNSIQEITADIFVENTKLKGVRLEGNALQRLPEQMLQGLASLEELYLNGNRLSELPDGLLAVDKLGVKVPVFLDLSHNELSAVPQGIARLLAQRMFILILHDNPLCSAPAQGPGESHVRKACKLGTRGGTARP
SIO_010081: LOC116950296
subclass of: SO_0000673
so part of: LOC116950296
location: join(1154243..1155221,1156220..1156563)
location: region:1154243-1156563:1
so has part: feature:1154243-1155221:1:exon
so has part: feature:1156220-1156563:1:exon

XP_032823899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1154243-1155221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1156220-1156563:1:exon

LOC116950105
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950105
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1162435..1191777)
location: region:1162435-1191777:-1
so has part: feature:1162435-1191777:-1:exon
subclass of: SO_0000010

116950105
type: Gene
SIO_000068: ncbigene

position:1162435:-1
position: 1162435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1191777:-1
position: 1191777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1162435-1191777:-1:exon

LOC116950105
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950105
product: insulin receptor substrate 4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032967559.1
SIO_010081: LOC116950105
subclass of: SO_0000673
so part of: LOC116950105
location: complement(join(1162435..1163760,1167446..1167564,1173200..1174555))
location: region:1162435-1174555:-1
so has part: feature:1173200-1174555:-1:exon
so has part: feature:1167446-1167564:-1:exon
so has part: feature:1162435-1163760:-1:exon

position:1174555:-1
position: 1174555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173200-1174555:-1:exon

position:1173200:-1
position: 1173200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1167446-1167564:-1:exon

position:1167446:-1
position: 1167446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167564:-1
position: 1167564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1162435-1163760:-1:exon

position:1163760:-1
position: 1163760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116950105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950105
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin receptor substrate 2-like isoform X1
translation: MSLPSSPSPPTTTSPPPTTSPPTTSPPSTSPPPTTPSPARGSWHVALYSDVEKSGYLTKRRSGHRRYFVLRGACHSARLECHDSRESWLGKGPPAKDAHERGARGPLARLARWPLAHLPGLRQRPRRVVPLCGLMHVVERSDERCPHGLALLTDSAYLALGAPDEAEQRAWLSALRALVAVDGAKLGGPWGALPAAPGGGGAGGGPGAHQRQQLLLLDAWQGELLSQDLGLTTLLAGPCRVFFYTEHLHYVSPARGPRTDATRVIVSLFCIKYFGHSDDCFFITLGNSSDLGPGQIWMRVEDDTMAAAIHHNLLLAVEELSLCRMWSRPQPPRPKLCSSASTARRRLGSSGLRGHAPPQRAPRELPGA
SIO_010081: LOC116950105
subclass of: SO_0000673
so part of: LOC116950105
location: complement(join(1163551..1163760,1167446..1167564,1173200..1173977))
location: region:1163551-1173977:-1
so has part: feature:1173200-1173977:-1:exon
so has part: feature:1167446-1167564:-1:exon
so has part: feature:1163551-1163760:-1:exon

XP_032823450.1
type: Protein
SIO_000068: ncbiprotein

position:1163551:-1
position: 1163551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173977:-1
position: 1173977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173200-1173977:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1167446-1167564:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1163551-1163760:-1:exon

LOC116950105
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7757
gene: LOC116950105
product: insulin receptor substrate 4-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004403965.1
SIO_010081: LOC116950105
so part of: LOC116950105
location: complement(join(1164982..1166305,1167446..1167564,1191535..1191777))
location: region:1164982-1191777:-1
so has part: feature:1191535-1191777:-1:exon
so has part: feature:1167446-1167564:-1:exon
so has part: feature:1164982-1166305:-1:exon

position:1164982:-1
position: 1164982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1191535-1191777:-1:exon

position:1191535:-1
position: 1191535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1167446-1167564:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1164982-1166305:-1:exon

position:1166305:-1
position: 1166305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116950105
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950105
product: insulin receptor substrate 4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032967560.1
SIO_010081: LOC116950105
subclass of: SO_0000673
so part of: LOC116950105
location: complement(join(1164982..1166305,1167446..1167564,1173200..1174555))
location: region:1164982-1174555:-1
so has part: feature:1173200-1174555:-1:exon
so has part: feature:1167446-1167564:-1:exon
so has part: feature:1164982-1166305:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1173200-1174555:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1167446-1167564:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1164982-1166305:-1:exon

LOC116950105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950105
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin receptor substrate 4-like isoform X2
translation: MSLPSSPSPPTTTSPPPTTSPPTTSPPSTSPPPTTPSPARGSWHVALYSDVEKSGYLTKRRSGHRRYFVLRGACHSARLECHDSRESWLGKGPPAKDAHERGARGPLARLARWPLAHLPGLRQRPRRVVPLCGLMHVVERSDERCPHGLALLTDSAYLALGAPDEAEQRAWLSALRALVAVDGAKLGGPWGALPAAPGGGGAGGGPGAHQRQQLLLLDAWQGELLSQDLGLTTLLAGPCRVFFYTEHLHYVSPARGPRTDATRVIVSLFCIKYFGHSDDCFFITLGNSSDLGPGQIWMREVDLWQRRTVRDGRRR
SIO_010081: LOC116950105
subclass of: SO_0000673
so part of: LOC116950105
location: complement(join(1166255..1166305,1167446..1167564,1173200..1173977))
location: region:1166255-1173977:-1
so has part: feature:1173200-1173977:-1:exon
so has part: feature:1167446-1167564:-1:exon
so has part: feature:1166255-1166305:-1:exon

XP_032823451.1
type: Protein
SIO_000068: ncbiprotein

position:1166255:-1
position: 1166255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173200-1173977:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1167446-1167564:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1166255-1166305:-1:exon

LOC116950105
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7757
gene: LOC116950105
product: insulin receptor substrate 4-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004403964.1
SIO_010081: LOC116950105
so part of: LOC116950105
location: complement(join(1184907..1186977,1189995..1190107,1191535..1191774))
location: region:1184907-1191774:-1
so has part: feature:1191535-1191774:-1:exon
so has part: feature:1189995-1190107:-1:exon
so has part: feature:1184907-1186977:-1:exon

position:1184907:-1
position: 1184907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1191774:-1
position: 1191774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1191535-1191774:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1189995-1190107:-1:exon

position:1189995:-1
position: 1189995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1190107:-1
position: 1190107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1184907-1186977:-1:exon

position:1186977:-1
position: 1186977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116950105
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7757
gene: LOC116950105
product: insulin receptor substrate 4-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XR_004403963.1
SIO_010081: LOC116950105
so part of: LOC116950105
location: complement(join(1184907..1186977,1191535..1191773))
location: region:1184907-1191773:-1
so has part: feature:1191535-1191773:-1:exon
so has part: feature:1184907-1186977:-1:exon

position:1191773:-1
position: 1191773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1191535-1191773:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1184907-1186977:-1:exon

LOC116950105
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7757
gene: LOC116950105
product: insulin receptor substrate 4-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XR_004403962.1
SIO_010081: LOC116950105
so part of: LOC116950105
location: complement(join(1189764..1190107,1191535..1191777))
location: region:1189764-1191777:-1
so has part: feature:1191535-1191777:-1:exon
so has part: feature:1189764-1190107:-1:exon

position:1189764:-1
position: 1189764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1191535-1191777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1189764-1190107:-1:exon

LOC116950106
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1249575..1259249)
location: region:1249575-1259249:-1
so has part: feature:1249575-1259249:-1:exon
subclass of: SO_0000010

116950106
type: Gene
SIO_000068: ncbigene

position:1249575:-1
position: 1249575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1259249:-1
position: 1259249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1249575-1259249:-1:exon

LOC116950106
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950106
product: T-box transcription factor TBX5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032967561.1
SIO_010081: LOC116950106
subclass of: SO_0000673
so part of: LOC116950106
location: complement(join(1249575..1251433,1251893..1252043,1252448..1252521,1253025..1253095,1254170..1254319,1254980..1255253,1256103..1256283,1258724..1259249))
location: region:1249575-1259249:-1
so has part: feature:1258724-1259249:-1:exon
so has part: feature:1256103-1256283:-1:exon
so has part: feature:1254980-1255253:-1:exon
so has part: feature:1254170-1254319:-1:exon
so has part: feature:1253025-1253095:-1:exon
so has part: feature:1252448-1252521:-1:exon
so has part: feature:1251893-1252043:-1:exon
so has part: feature:1249575-1251433:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1258724-1259249:-1:exon

position:1258724:-1
position: 1258724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1256103-1256283:-1:exon

position:1256103:-1
position: 1256103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256283:-1
position: 1256283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1254980-1255253:-1:exon

position:1254980:-1
position: 1254980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255253:-1
position: 1255253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1254170-1254319:-1:exon

position:1254170:-1
position: 1254170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254319:-1
position: 1254319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1253025-1253095:-1:exon

position:1253025:-1
position: 1253025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253095:-1
position: 1253095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1252448-1252521:-1:exon

position:1252448:-1
position: 1252448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252521:-1
position: 1252521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1251893-1252043:-1:exon

position:1251893:-1
position: 1251893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252043:-1
position: 1252043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1249575-1251433:-1:exon

position:1251433:-1
position: 1251433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116950106
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-box transcription factor TBX5-like
translation: MFETGELMPFHRPLPLAPMTAGPCPGMCRQQHHHHQQQHHQQPQHHHHQHVGDGAAFSRDWAAPRHAPPSLPLSCLQATAGSTPFPGSAQSGVAATLDNAELWRKFHAIGTEMIITKSGRRSFPPCKLRFSGLDPNANYFMLMELVPADEVKYKWREAEGRWEASGPAELSMPSRLYVHPSSPSSGAQWMRQPVSFHKAKLTNNALSKSGHLILHSMHKYQPCFYVVRDTDWRGVAAAHSPLTFSFPDTTFIAVTAYQNSLITKLKIATNPFAKGFREDGLNHERIRKLRSRNATKRPLGKDEGAEEASDAKQLRSDGYGGGDADTGGEAELYRGGSQTNPIHAFGSGTAGEQHHRLLSSAHHMSPLEDQVAPCSSAFPEQLGGDFISPSSLPGPPFPPALPACPASLPTSSTVFAGAVTGGSWLECPTAGAAAPMESLAGDHGPSPASHACSSPDDHPFSSHSSSSGHSYSSHTSVSPAGEGGCRADSDNHGAAHSQSTQSQTSPVALGSQAPGFQPGAPLACGQVTQSNANAAAAAAAAAAAFGQTFASQNFASQNFASQSFASQNFASQNFPSQSFGSQSFGSQSFASQGFGSQSFGSQSFGSQAYGYQAPALSQAYAGRAFPSANQAYGGQACNAAAVAAAPALGGQSSVSQGLLLGGFATHGAGTAPLYDLYSMYQPAAAAAATSAAAQMPYSSCELPRAAWYSQCSGPAFIH
SIO_010081: LOC116950106
subclass of: SO_0000673
so part of: LOC116950106
location: complement(join(1250356..1251433,1251893..1252043,1252448..1252521,1253025..1253095,1254170..1254319,1254980..1255253,1256103..1256283,1258724..1258901))
location: region:1250356-1258901:-1
so has part: feature:1258724-1258901:-1:exon
so has part: feature:1256103-1256283:-1:exon
so has part: feature:1254980-1255253:-1:exon
so has part: feature:1254170-1254319:-1:exon
so has part: feature:1253025-1253095:-1:exon
so has part: feature:1252448-1252521:-1:exon
so has part: feature:1251893-1252043:-1:exon
so has part: feature:1250356-1251433:-1:exon

XP_032823452.1
type: Protein
SIO_000068: ncbiprotein

position:1250356:-1
position: 1250356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1258901:-1
position: 1258901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1258724-1258901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1256103-1256283:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1254980-1255253:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1254170-1254319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1253025-1253095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1252448-1252521:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1251893-1252043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1250356-1251433:-1:exon

SMYD4
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: SMYD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1271082..1293955)
location: region:1271082-1293955:-1
so has part: feature:1271082-1293955:-1:exon
subclass of: SO_0000010

116950107
type: Gene
SIO_000068: ncbigene

position:1271082:-1
position: 1271082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293955:-1
position: 1293955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1271082-1293955:-1:exon

SMYD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: SMYD4
product: SET and MYND domain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032967562.1
SIO_010081: SMYD4
subclass of: SO_0000673
so part of: SMYD4
location: complement(join(1271082..1272904,1275559..1275682,1276773..1276889,1278003..1278156,1281930..1282090,1284802..1284990,1285580..1285821,1286016..1286205,1286717..1286979,1287673..1287893,1288174..1288419,1289321..1289410,1289964..1290108,1293051..1293955))
location: region:1271082-1293955:-1
so has part: feature:1293051-1293955:-1:exon
so has part: feature:1289964-1290108:-1:exon
so has part: feature:1289321-1289410:-1:exon
so has part: feature:1288174-1288419:-1:exon
so has part: feature:1287673-1287893:-1:exon
so has part: feature:1286717-1286979:-1:exon
so has part: feature:1286016-1286205:-1:exon
so has part: feature:1285580-1285821:-1:exon
so has part: feature:1284802-1284990:-1:exon
so has part: feature:1281930-1282090:-1:exon
so has part: feature:1278003-1278156:-1:exon
so has part: feature:1276773-1276889:-1:exon
so has part: feature:1275559-1275682:-1:exon
so has part: feature:1271082-1272904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1293051-1293955:-1:exon

position:1293051:-1
position: 1293051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1289964-1290108:-1:exon

position:1289964:-1
position: 1289964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290108:-1
position: 1290108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1289321-1289410:-1:exon

position:1289321:-1
position: 1289321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1289410:-1
position: 1289410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1288174-1288419:-1:exon

position:1288174:-1
position: 1288174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288419:-1
position: 1288419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1287673-1287893:-1:exon

position:1287673:-1
position: 1287673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287893:-1
position: 1287893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1286717-1286979:-1:exon

position:1286717:-1
position: 1286717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286979:-1
position: 1286979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1286016-1286205:-1:exon

position:1286016:-1
position: 1286016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286205:-1
position: 1286205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1285580-1285821:-1:exon

position:1285580:-1
position: 1285580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1285821:-1
position: 1285821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1284802-1284990:-1:exon

position:1284802:-1
position: 1284802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284990:-1
position: 1284990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1281930-1282090:-1:exon

position:1281930:-1
position: 1281930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282090:-1
position: 1282090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1278003-1278156:-1:exon

position:1278003:-1
position: 1278003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278156:-1
position: 1278156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1276773-1276889:-1:exon

position:1276773:-1
position: 1276773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276889:-1
position: 1276889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1275559-1275682:-1:exon

position:1275559:-1
position: 1275559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1275682:-1
position: 1275682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1271082-1272904:-1:exon

position:1272904:-1
position: 1272904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMYD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: SMYD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SET and MYND domain-containing protein 4 isoform X1
translation: MASPPLLLPRVLSAALEARGSERVDEKGGSRERIDAGRDEREPGGRGSPGDESGERARDERERGDPQPSLSKLVRRCWSQWSEQDEALLRRTCAPLAAAKDPAGALRHRQEGNRFFQQKQNGRAAACYSRSICLATPGSEEQALAFANRSAALFHMQHHQACLDDIDRALANGYPARLTHKLLSRRADALAALEHARQNPGDNPTAAVAAMGNPDVSAAGGCGRDETLAENGGRAGERVSVELRWSERSGRHLVAARDLHPGETLLVEPAFASAVAPDADADRERALSPEERCCHHCLREAEPVLPVPCQRCSYARFCGEPCRDAAVRSRHHGSVECALASRGLLQGLGPFVQASLRTLLIAGPRGVVAAVSGDASGGDEEIARTCADFLRDAPSGAGSDAEKAGTPGVDKTPTVSAAASAVKIAGCGEDAVYRSDYRAVYHLVTHADTRDTAHILPLAWAAAAVCRHLHELGFSFLSGEPGGTAPSPESGRSGAGREDEGATGAGGHVVAPAELQGELLLVGTLLLRHLLQLWCNAYAVTTLSSGTAFPAPAAAVESSEHRRVAVALFPVASLLNHACRPNVSLAFRGAVLTVRAAAPILAGEQLLHCYGPQAERMEGAERRRLLRSEYRFECACAACAEEEERGGPHPHDAFLCESCGSFLKRGGESTPVDEMECSSVRCGRRFSRAPLLASHAELRALVARARSAFEEHGKPEVASKVLAECLRRGRSLLNPLHATLGEASDCLAQVLAAQGRWEDAARHLRSSLVSVEARFGPGSPETAYELFKLTQLLFNGSTRGSLWEADTSRDGPGAEVRTPQRGTDGAGSAARLTRIKWVSPRSSLARSSKETPTLPAHACLTVPLAVHETHGGARRGRGVGDATDRGATEARQRRVGRKFNRPRRSNEDGVALVSHR
SIO_010081: SMYD4
subclass of: SO_0000673
so part of: SMYD4
location: complement(join(1272541..1272904,1275559..1275682,1276773..1276889,1278003..1278156,1281930..1282090,1284802..1284990,1285580..1285821,1286016..1286205,1286717..1286979,1287673..1287893,1288174..1288419,1289321..1289410,1289964..1290108,1293051..1293295))
location: region:1272541-1293295:-1
so has part: feature:1293051-1293295:-1:exon
so has part: feature:1289964-1290108:-1:exon
so has part: feature:1289321-1289410:-1:exon
so has part: feature:1288174-1288419:-1:exon
so has part: feature:1287673-1287893:-1:exon
so has part: feature:1286717-1286979:-1:exon
so has part: feature:1286016-1286205:-1:exon
so has part: feature:1285580-1285821:-1:exon
so has part: feature:1284802-1284990:-1:exon
so has part: feature:1281930-1282090:-1:exon
so has part: feature:1278003-1278156:-1:exon
so has part: feature:1276773-1276889:-1:exon
so has part: feature:1275559-1275682:-1:exon
so has part: feature:1272541-1272904:-1:exon

XP_032823453.1
type: Protein
SIO_000068: ncbiprotein

position:1272541:-1
position: 1272541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293295:-1
position: 1293295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1293051-1293295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1289964-1290108:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1289321-1289410:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288174-1288419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1287673-1287893:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1286717-1286979:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1286016-1286205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1285580-1285821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1284802-1284990:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1281930-1282090:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1278003-1278156:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1276773-1276889:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1275559-1275682:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1272541-1272904:-1:exon

SMYD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: SMYD4
product: SET and MYND domain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032967563.1
SIO_010081: SMYD4
subclass of: SO_0000673
so part of: SMYD4
location: complement(join(1272784..1275274,1275559..1275682,1276773..1276889,1278003..1278156,1281930..1282090,1284802..1284990,1285580..1285821,1286016..1286205,1286717..1286979,1287673..1287893,1288174..1288419,1289321..1289410,1289964..1290108,1293051..1293955))
location: region:1272784-1293955:-1
so has part: feature:1293051-1293955:-1:exon
so has part: feature:1289964-1290108:-1:exon
so has part: feature:1289321-1289410:-1:exon
so has part: feature:1288174-1288419:-1:exon
so has part: feature:1287673-1287893:-1:exon
so has part: feature:1286717-1286979:-1:exon
so has part: feature:1286016-1286205:-1:exon
so has part: feature:1285580-1285821:-1:exon
so has part: feature:1284802-1284990:-1:exon
so has part: feature:1281930-1282090:-1:exon
so has part: feature:1278003-1278156:-1:exon
so has part: feature:1276773-1276889:-1:exon
so has part: feature:1275559-1275682:-1:exon
so has part: feature:1272784-1275274:-1:exon

position:1272784:-1
position: 1272784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1293051-1293955:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1289964-1290108:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1289321-1289410:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288174-1288419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1287673-1287893:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1286717-1286979:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1286016-1286205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1285580-1285821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1284802-1284990:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1281930-1282090:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1278003-1278156:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1276773-1276889:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1275559-1275682:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1272784-1275274:-1:exon

position:1275274:-1
position: 1275274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMYD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: SMYD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SET and MYND domain-containing protein 4 isoform X2
translation: MASPPLLLPRVLSAALEARGSERVDEKGGSRERIDAGRDEREPGGRGSPGDESGERARDERERGDPQPSLSKLVRRCWSQWSEQDEALLRRTCAPLAAAKDPAGALRHRQEGNRFFQQKQNGRAAACYSRSICLATPGSEEQALAFANRSAALFHMQHHQACLDDIDRALANGYPARLTHKLLSRRADALAALEHARQNPGDNPTAAVAAMGNPDVSAAGGCGRDETLAENGGRAGERVSVELRWSERSGRHLVAARDLHPGETLLVEPAFASAVAPDADADRERALSPEERCCHHCLREAEPVLPVPCQRCSYARFCGEPCRDAAVRSRHHGSVECALASRGLLQGLGPFVQASLRTLLIAGPRGVVAAVSGDASGGDEEIARTCADFLRDAPSGAGSDAEKAGTPGVDKTPTVSAAASAVKIAGCGEDAVYRSDYRAVYHLVTHADTRDTAHILPLAWAAAAVCRHLHELGFSFLSGEPGGTAPSPESGRSGAGREDEGATGAGGHVVAPAELQGELLLVGTLLLRHLLQLWCNAYAVTTLSSGTAFPAPAAAVESSEHRRVAVALFPVASLLNHACRPNVSLAFRGAVLTVRAAAPILAGEQLLHCYGPQAERMEGAERRRLLRSEYRFECACAACAEEEERGGPHPHDAFLCESCGSFLKRGGESTPVDEMECSSVRCGRRFSRAPLLASHAELRALVARARSAFEEHGKPEVASKVLAECLRRGRSLLNPLHATLGEASDCLAQVLAAQGRWEDAARHLRSSLVSVEARFGPGSPETAYELFKLTQLLFNGRRAREALEVEERAAALLSLHFGEDHPPVQELRDMRRCLLAFLSRPSAS
SIO_010081: SMYD4
subclass of: SO_0000673
so part of: SMYD4
location: complement(join(1275127..1275274,1275559..1275682,1276773..1276889,1278003..1278156,1281930..1282090,1284802..1284990,1285580..1285821,1286016..1286205,1286717..1286979,1287673..1287893,1288174..1288419,1289321..1289410,1289964..1290108,1293051..1293295))
location: region:1275127-1293295:-1
so has part: feature:1293051-1293295:-1:exon
so has part: feature:1289964-1290108:-1:exon
so has part: feature:1289321-1289410:-1:exon
so has part: feature:1288174-1288419:-1:exon
so has part: feature:1287673-1287893:-1:exon
so has part: feature:1286717-1286979:-1:exon
so has part: feature:1286016-1286205:-1:exon
so has part: feature:1285580-1285821:-1:exon
so has part: feature:1284802-1284990:-1:exon
so has part: feature:1281930-1282090:-1:exon
so has part: feature:1278003-1278156:-1:exon
so has part: feature:1276773-1276889:-1:exon
so has part: feature:1275559-1275682:-1:exon
so has part: feature:1275127-1275274:-1:exon

XP_032823454.1
type: Protein
SIO_000068: ncbiprotein

position:1275127:-1
position: 1275127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1293051-1293295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1289964-1290108:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1289321-1289410:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288174-1288419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1287673-1287893:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1286717-1286979:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1286016-1286205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1285580-1285821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1284802-1284990:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1281930-1282090:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1278003-1278156:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1276773-1276889:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1275559-1275682:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1275127-1275274:-1:exon

HSCB
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: HSCB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1294102..1301551)
location: region:1294102-1301551:-1
so has part: feature:1294102-1301551:-1:exon
subclass of: SO_0000010

116950108
type: Gene
SIO_000068: ncbigene

position:1294102:-1
position: 1294102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301551:-1
position: 1301551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294102-1301551:-1:exon

HSCB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: HSCB
product: HscB mitochondrial iron-sulfur cluster cochaperone, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_032967564.1
SIO_010081: HSCB
subclass of: SO_0000673
so part of: HSCB
location: complement(join(1294102..1295025,1297208..1297255,1298092..1298233,1299071..1299160,1300631..1301551))
location: region:1294102-1301551:-1
so has part: feature:1300631-1301551:-1:exon
so has part: feature:1299071-1299160:-1:exon
so has part: feature:1298092-1298233:-1:exon
so has part: feature:1297208-1297255:-1:exon
so has part: feature:1294102-1295025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300631-1301551:-1:exon

position:1300631:-1
position: 1300631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1299071-1299160:-1:exon

position:1299071:-1
position: 1299071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1299160:-1
position: 1299160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1298092-1298233:-1:exon

position:1298092:-1
position: 1298092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1298233:-1
position: 1298233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1297208-1297255:-1:exon

position:1297208:-1
position: 1297208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1297255:-1
position: 1297255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1294102-1295025:-1:exon

position:1295025:-1
position: 1295025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSCB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: HSCB
product: HscB mitochondrial iron-sulfur cluster cochaperone, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_032967566.1
SIO_010081: HSCB
subclass of: SO_0000673
so part of: HSCB
location: complement(join(1294102..1295025,1297208..1297255,1298092..1298233,1299071..1299160,1299398..1299494,1300631..1300937))
location: region:1294102-1300937:-1
so has part: feature:1300631-1300937:-1:exon
so has part: feature:1299398-1299494:-1:exon
so has part: feature:1299071-1299160:-1:exon
so has part: feature:1298092-1298233:-1:exon
so has part: feature:1297208-1297255:-1:exon
so has part: feature:1294102-1295025:-1:exon

position:1300937:-1
position: 1300937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1300631-1300937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299398-1299494:-1:exon

position:1299398:-1
position: 1299398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1299494:-1
position: 1299494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1299071-1299160:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1298092-1298233:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1297208-1297255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294102-1295025:-1:exon

HSCB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: HSCB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iron-sulfur cluster co-chaperone protein HscB isoform X1
translation: MVPRTSRPFDIEFQSTTASNLTPKILLHHLLLLKPSAAPYSTHNAALRGAAVAGDGQRGTPRENVDVSSSSSSLLRHLRLLHQHLHRLTVGEAEAVSEPREASVRRQPSRGARRRGGAAVLGLPERCRCRLRLLLLPLPLGATPSTGGLALPAAGLRELDLSQQQSALVNKAYNTLLKPLPRGVYLLERHGLSLEDTTEDMDPEFLMEIMEINEDLEDADSLQEIEDISRCNLEKLQELTQEVMQAFDAGNFLLARLLLTKMNYFTNIDEKVKEKRLQYS
SIO_010081: HSCB
subclass of: SO_0000673
so part of: HSCB
location: complement(join(1294931..1295025,1297208..1297255,1298092..1298233,1299071..1299160,1300631..1301098))
location: region:1294931-1301098:-1
so has part: feature:1300631-1301098:-1:exon
so has part: feature:1299071-1299160:-1:exon
so has part: feature:1298092-1298233:-1:exon
so has part: feature:1297208-1297255:-1:exon
so has part: feature:1294931-1295025:-1:exon

XP_032823455.1
type: Protein
SIO_000068: ncbiprotein

position:1294931:-1
position: 1294931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301098:-1
position: 1301098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1300631-1301098:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299071-1299160:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1298092-1298233:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1297208-1297255:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1294931-1295025:-1:exon

HSCB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: HSCB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iron-sulfur cluster co-chaperone protein HscB isoform X2
translation: MARGALRARTSTCPPPPHPSSVIFASCISTSTASPSARPRLCPSPVRRLCGASQVGEPGEEAAPRCWGCRSDVGADSVFFCSRCHSVLPPRPGASLFQLLGCNESFSVNLQKLQQAYLALQRQLHPDNFSQKSQRELDLSQQQSALVNKAYNTLLKPLPRGVYLLERHGLSLEDTTEDMDPEFLMEIMEINEDLEDADSLQEIEDISRCNLEKLQELTQEVMQAFDAGNFLLARLLLTKMNYFTNIDEKVKEKRLQYS
SIO_010081: HSCB
subclass of: SO_0000673
so part of: HSCB
location: complement(join(1294931..1295025,1297208..1297255,1298092..1298233,1299071..1299160,1299398..1299494,1300631..1300935))
location: region:1294931-1300935:-1
so has part: feature:1300631-1300935:-1:exon
so has part: feature:1299398-1299494:-1:exon
so has part: feature:1299071-1299160:-1:exon
so has part: feature:1298092-1298233:-1:exon
so has part: feature:1297208-1297255:-1:exon
so has part: feature:1294931-1295025:-1:exon

XP_032823457.1
type: Protein
SIO_000068: ncbiprotein

position:1300935:-1
position: 1300935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1300631-1300935:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299398-1299494:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1299071-1299160:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1298092-1298233:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1297208-1297255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294931-1295025:-1:exon

LOC116950109
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1303838..1312189)
location: region:1303838-1312189:-1
so has part: feature:1303838-1312189:-1:exon
subclass of: SO_0000010

116950109
type: Gene
SIO_000068: ncbigene

position:1303838:-1
position: 1303838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1312189:-1
position: 1312189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1303838-1312189:-1:exon

LOC116950109
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950109
product: protein DGCR6-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_032967567.1
SIO_010081: LOC116950109
subclass of: SO_0000673
so part of: LOC116950109
location: complement(join(1303838..1305117,1306175..1306315,1306997..1307097,1309835..1309995,1312011..1312189))
location: region:1303838-1312189:-1
so has part: feature:1312011-1312189:-1:exon
so has part: feature:1309835-1309995:-1:exon
so has part: feature:1306997-1307097:-1:exon
so has part: feature:1306175-1306315:-1:exon
so has part: feature:1303838-1305117:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1312011-1312189:-1:exon

position:1312011:-1
position: 1312011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1309835-1309995:-1:exon

position:1309835:-1
position: 1309835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1309995:-1
position: 1309995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1306997-1307097:-1:exon

position:1306997:-1
position: 1306997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1307097:-1
position: 1307097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1306175-1306315:-1:exon

position:1306175:-1
position: 1306175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1306315:-1
position: 1306315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1303838-1305117:-1:exon

position:1305117:-1
position: 1305117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116950109
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950109
product: protein DGCR6-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_032967569.1
SIO_010081: LOC116950109
subclass of: SO_0000673
so part of: LOC116950109
location: complement(join(1303838..1305117,1306175..1306315,1306997..1307097,1309835..1309995,1311771..1311927))
location: region:1303838-1311927:-1
so has part: feature:1311771-1311927:-1:exon
so has part: feature:1309835-1309995:-1:exon
so has part: feature:1306997-1307097:-1:exon
so has part: feature:1306175-1306315:-1:exon
so has part: feature:1303838-1305117:-1:exon

position:1311927:-1
position: 1311927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1311771-1311927:-1:exon

position:1311771:-1
position: 1311771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1309835-1309995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306997-1307097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306175-1306315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1303838-1305117:-1:exon

LOC116950109
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950109
product: protein DGCR6-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032967568.1
SIO_010081: LOC116950109
subclass of: SO_0000673
so part of: LOC116950109
location: complement(join(1303838..1305117,1306175..1306315,1306997..1307097,1309835..1309995,1311705..1311927))
location: region:1303838-1311927:-1
so has part: feature:1311705-1311927:-1:exon
so has part: feature:1309835-1309995:-1:exon
so has part: feature:1306997-1307097:-1:exon
so has part: feature:1306175-1306315:-1:exon
so has part: feature:1303838-1305117:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1311705-1311927:-1:exon

position:1311705:-1
position: 1311705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1309835-1309995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306997-1307097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306175-1306315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1303838-1305117:-1:exon

LOC116950109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein DGCR6-like isoform X1
translation: MEAEEQQARHYQLLGQLQLRLRELPSVYQQRLTYDMLSDLALALIDGTVYEIVQGLKDIQQLTEKNLYSQRLKLHNEHRVLKQDLLRRQQEALQSCKPHNIALLQSAQQREMEALEKRIKAEQKSMDEHVVLELDQKVEDQQSTLEKSGVPGFYVTQNPQEITLQLQLLSLIMKVQECHTEQEGT
SIO_010081: LOC116950109
subclass of: SO_0000673
so part of: LOC116950109
location: complement(join(1305040..1305117,1306175..1306315,1306997..1307097,1309835..1309995,1312011..1312087))
location: region:1305040-1312087:-1
so has part: feature:1312011-1312087:-1:exon
so has part: feature:1309835-1309995:-1:exon
so has part: feature:1306997-1307097:-1:exon
so has part: feature:1306175-1306315:-1:exon
so has part: feature:1305040-1305117:-1:exon

XP_032823458.1
type: Protein
SIO_000068: ncbiprotein

position:1305040:-1
position: 1305040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1312087:-1
position: 1312087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1312011-1312087:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1309835-1309995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306997-1307097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306175-1306315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1305040-1305117:-1:exon

LOC116950109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein DGCR6-like isoform X2
translation: MLSDLALALIDGTVYEIVQGLKDIQQLTEKNLYSQRLKLHNEHRVLKQDLLRRQQEALQSCKPHNIALLQSAQQREMEALEKRIKAEQKSMDEHVVLELDQKVEDQQSTLEKSGVPGFYVTQNPQEITLQLQLLSLIMKVQECHTEQEGT
SIO_010081: LOC116950109
subclass of: SO_0000673
so part of: LOC116950109
location: complement(join(1305040..1305117,1306175..1306315,1306997..1307097,1309835..1309967))
location: region:1305040-1309967:-1
so has part: feature:1309835-1309967:-1:exon
so has part: feature:1306997-1307097:-1:exon
so has part: feature:1306175-1306315:-1:exon
so has part: feature:1305040-1305117:-1:exon

XP_032823459.1
type: Protein
SIO_000068: ncbiprotein

position:1309967:-1
position: 1309967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1309835-1309967:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306997-1307097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306175-1306315:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1305040-1305117:-1:exon

LOC116950109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein DGCR6-like isoform X2
translation: MLSDLALALIDGTVYEIVQGLKDIQQLTEKNLYSQRLKLHNEHRVLKQDLLRRQQEALQSCKPHNIALLQSAQQREMEALEKRIKAEQKSMDEHVVLELDQKVEDQQSTLEKSGVPGFYVTQNPQEITLQLQLLSLIMKVQECHTEQEGT
SIO_010081: LOC116950109
subclass of: SO_0000673
so part of: LOC116950109
location: complement(join(1305040..1305117,1306175..1306315,1306997..1307097,1309835..1309967))
location: region:1305040-1309967:-1
so has part: feature:1309835-1309967:-1:exon
so has part: feature:1306997-1307097:-1:exon
so has part: feature:1306175-1306315:-1:exon
so has part: feature:1305040-1305117:-1:exon

XP_032823460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1309835-1309967:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306997-1307097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306175-1306315:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1305040-1305117:-1:exon

SART3
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: SART3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1312691..1343263
location: region:1312691-1343263:1
so has part: feature:1312691-1343263:1:exon
subclass of: SO_0000010

116950110
type: Gene
SIO_000068: ncbigene

position:1312691:1
position: 1312691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343263:1
position: 1343263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1312691-1343263:1:exon

SART3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: SART3
product: spliceosome associated factor 3, U4/U6 recycling protein
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032967570.1
SIO_010081: SART3
subclass of: SO_0000673
so part of: SART3
location: join(1312691..1313356,1323896..1324022,1324650..1324754,1325436..1325620,1327125..1327230,1329735..1329859,1330993..1331148,1332049..1332187,1332609..1332716,1332924..1333001,1333475..1333533,1334074..1334183,1334748..1334860,1335470..1335546,1336180..1336327,1337981..1338263,1339983..1340263,1340937..1341089,1342340..1342521,1343025..1343114,1343170..1343263)
location: region:1312691-1343263:1
so has part: feature:1312691-1313356:1:exon
so has part: feature:1323896-1324022:1:exon
so has part: feature:1324650-1324754:1:exon
so has part: feature:1325436-1325620:1:exon
so has part: feature:1327125-1327230:1:exon
so has part: feature:1329735-1329859:1:exon
so has part: feature:1330993-1331148:1:exon
so has part: feature:1332049-1332187:1:exon
so has part: feature:1332609-1332716:1:exon
so has part: feature:1332924-1333001:1:exon
so has part: feature:1333475-1333533:1:exon
so has part: feature:1334074-1334183:1:exon
so has part: feature:1334748-1334860:1:exon
so has part: feature:1335470-1335546:1:exon
so has part: feature:1336180-1336327:1:exon
so has part: feature:1337981-1338263:1:exon
so has part: feature:1339983-1340263:1:exon
so has part: feature:1340937-1341089:1:exon
so has part: feature:1342340-1342521:1:exon
so has part: feature:1343025-1343114:1:exon
so has part: feature:1343170-1343263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1312691-1313356:1:exon

position:1313356:1
position: 1313356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1323896-1324022:1:exon

position:1323896:1
position: 1323896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1324022:1
position: 1324022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1324650-1324754:1:exon

position:1324650:1
position: 1324650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1324754:1
position: 1324754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1325436-1325620:1:exon

position:1325436:1
position: 1325436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325620:1
position: 1325620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1327125-1327230:1:exon

position:1327125:1
position: 1327125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1327230:1
position: 1327230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1329735-1329859:1:exon

position:1329735:1
position: 1329735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1329859:1
position: 1329859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1330993-1331148:1:exon

position:1330993:1
position: 1330993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1331148:1
position: 1331148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1332049-1332187:1:exon

position:1332049:1
position: 1332049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1332187:1
position: 1332187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1332609-1332716:1:exon

position:1332609:1
position: 1332609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1332716:1
position: 1332716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1332924-1333001:1:exon

position:1332924:1
position: 1332924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1333001:1
position: 1333001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1333475-1333533:1:exon

position:1333475:1
position: 1333475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1333533:1
position: 1333533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1334074-1334183:1:exon

position:1334074:1
position: 1334074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334183:1
position: 1334183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1334748-1334860:1:exon

position:1334748:1
position: 1334748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334860:1
position: 1334860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1335470-1335546:1:exon

position:1335470:1
position: 1335470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335546:1
position: 1335546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1336180-1336327:1:exon

position:1336180:1
position: 1336180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1336327:1
position: 1336327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1337981-1338263:1:exon

position:1337981:1
position: 1337981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1338263:1
position: 1338263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1339983-1340263:1:exon

position:1339983:1
position: 1339983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1340263:1
position: 1340263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1340937-1341089:1:exon

position:1340937:1
position: 1340937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1341089:1
position: 1341089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1342340-1342521:1:exon

position:1342340:1
position: 1342340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1342521:1
position: 1342521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1343025-1343114:1:exon

position:1343025:1
position: 1343025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343114:1
position: 1343114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1343170-1343263:1:exon

position:1343170:1
position: 1343170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SART3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: SART3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: squamous cell carcinoma antigen recognized by T-cells 3
translation: MAEQEREELPGKEQKQQQQEKEDEQEMEEMEAESGSEAGSAGPAAGPGTDSDSESETDESEKEAEVQRLEEQLSINAHDYNCHTDLIKLLQQLGELERLAKARQKMSELFPLTEELWLDWLKDEIRMGTDEAERDRVSSLFERAVKDYLCPEIWLEYAQYSIGGMGQAGGVERVRAVFERALTAVGLHVTKGSAVWDAYREFENAVLGMMQPVLGVVLSAVQQEQLKAQTERLNTLFRRQLSLPLMDMEACFTEYEEWLESPVEASVRQAYGKALKQLEKYKSFENALLVAEPPKMAEYQAYIECELKEGDPARVQLVFERALADNCLVPDLWAQYTKYLDMQLKIKEVVLPAHRRATRNCPWATSLWKSFLLALERHHAEHDTVREVFDKALESGFMQATDYTELWQTYIDYLRRRVDFTQGSSQELEELRMTFHRAVESIRQEVAQRCAEGGDSSSAILQHWARIEANHCHNVQKARELWDQVMSQGNAKYGNMWLEYYHLERAFGDVQHARRALHRAVQCTSDYPEHICEALLTFEREEGTLEDWDAACQKIETKLKRVSEQRAKAAEKEAQRQKQEEEHSKAKLESKGGKKSQKKEHVSSGKRKAEPEWGHEAAQASKRIREEAGGGVPWEEDDEDEESKGRDAGAMVHASLGLSGAPPPSAAGRASGPGSSARPGPSRAAPGFSKGNAEKKGKAAEQAPTTTKFTPGAESCTVFVSNVAYSLADPDARLREALAPCGTIVEVRPVYSRSHHFRGYCYVQFDTEEGARGALAMDRTSIDGRPMFISPCVDKTKQQEQQPNKAFKYSTDLEKHKLFVSGLPFSCTKEELQEMFGKHGSIRETRMVTTRAGKFKGLAYIEYETVSQAAQAVLNLNGTTVRDSVVSVAISNPPARRRADQQQQQQPAVPARSVYGARGKGRTQLALVPRALQRRGAGGSKSQNGTAAAPAAAGGDATPAAGPMMSNADFARMLLRK
SIO_010081: SART3
subclass of: SO_0000673
so part of: SART3
location: join(1313141..1313356,1323896..1324022,1324650..1324754,1325436..1325620,1327125..1327230,1329735..1329859,1330993..1331148,1332049..1332187,1332609..1332716,1332924..1333001,1333475..1333533,1334074..1334183,1334748..1334860,1335470..1335546,1336180..1336327,1337981..1338263,1339983..1340263,1340937..1341089,1342340..1342521,1343025..1343114,1343170..1343263)
location: region:1313141-1343263:1
so has part: feature:1313141-1313356:1:exon
so has part: feature:1323896-1324022:1:exon
so has part: feature:1324650-1324754:1:exon
so has part: feature:1325436-1325620:1:exon
so has part: feature:1327125-1327230:1:exon
so has part: feature:1329735-1329859:1:exon
so has part: feature:1330993-1331148:1:exon
so has part: feature:1332049-1332187:1:exon
so has part: feature:1332609-1332716:1:exon
so has part: feature:1332924-1333001:1:exon
so has part: feature:1333475-1333533:1:exon
so has part: feature:1334074-1334183:1:exon
so has part: feature:1334748-1334860:1:exon
so has part: feature:1335470-1335546:1:exon
so has part: feature:1336180-1336327:1:exon
so has part: feature:1337981-1338263:1:exon
so has part: feature:1339983-1340263:1:exon
so has part: feature:1340937-1341089:1:exon
so has part: feature:1342340-1342521:1:exon
so has part: feature:1343025-1343114:1:exon
so has part: feature:1343170-1343263:1:exon

XP_032823461.1
type: Protein
SIO_000068: ncbiprotein

position:1313141:1
position: 1313141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1313141-1313356:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1323896-1324022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1324650-1324754:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1325436-1325620:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1327125-1327230:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1329735-1329859:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1330993-1331148:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1332049-1332187:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1332609-1332716:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1332924-1333001:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1333475-1333533:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1334074-1334183:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1334748-1334860:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1335470-1335546:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1336180-1336327:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1337981-1338263:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1339983-1340263:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1340937-1341089:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1342340-1342521:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1343025-1343114:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1343170-1343263:1:exon

VPS9D1
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: VPS9D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1346531..1371723)
location: region:1346531-1371723:-1
so has part: feature:1346531-1371723:-1:exon
subclass of: SO_0000010

116950111
type: Gene
SIO_000068: ncbigene

position:1346531:-1
position: 1346531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1371723:-1
position: 1371723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1346531-1371723:-1:exon

VPS9D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: VPS9D1
product: VPS9 domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_032967571.1
SIO_010081: VPS9D1
subclass of: SO_0000673
so part of: VPS9D1
location: complement(join(1346531..1348063,1349472..1349576,1349955..1350033,1350597..1350856,1351684..1351813,1353574..1353762,1354272..1354630,1356711..1356796,1358895..1358982,1360045..1360097,1360345..1360407,1360672..1360783,1361190..1361412,1362350..1362454,1364020..1364116,1371543..1371723))
location: region:1346531-1371723:-1
so has part: feature:1371543-1371723:-1:exon
so has part: feature:1364020-1364116:-1:exon
so has part: feature:1362350-1362454:-1:exon
so has part: feature:1361190-1361412:-1:exon
so has part: feature:1360672-1360783:-1:exon
so has part: feature:1360345-1360407:-1:exon
so has part: feature:1360045-1360097:-1:exon
so has part: feature:1358895-1358982:-1:exon
so has part: feature:1356711-1356796:-1:exon
so has part: feature:1354272-1354630:-1:exon
so has part: feature:1353574-1353762:-1:exon
so has part: feature:1351684-1351813:-1:exon
so has part: feature:1350597-1350856:-1:exon
so has part: feature:1349955-1350033:-1:exon
so has part: feature:1349472-1349576:-1:exon
so has part: feature:1346531-1348063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1371543-1371723:-1:exon

position:1371543:-1
position: 1371543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1364020-1364116:-1:exon

position:1364020:-1
position: 1364020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1364116:-1
position: 1364116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1362350-1362454:-1:exon

position:1362350:-1
position: 1362350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362454:-1
position: 1362454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1361190-1361412:-1:exon

position:1361190:-1
position: 1361190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361412:-1
position: 1361412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1360672-1360783:-1:exon

position:1360672:-1
position: 1360672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360783:-1
position: 1360783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1360345-1360407:-1:exon

position:1360345:-1
position: 1360345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360407:-1
position: 1360407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1360045-1360097:-1:exon

position:1360045:-1
position: 1360045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360097:-1
position: 1360097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1358895-1358982:-1:exon

position:1358895:-1
position: 1358895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358982:-1
position: 1358982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1356711-1356796:-1:exon

position:1356711:-1
position: 1356711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1356796:-1
position: 1356796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1354272-1354630:-1:exon

position:1354272:-1
position: 1354272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354630:-1
position: 1354630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1353574-1353762:-1:exon

position:1353574:-1
position: 1353574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353762:-1
position: 1353762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1351684-1351813:-1:exon

position:1351684:-1
position: 1351684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1351813:-1
position: 1351813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1350597-1350856:-1:exon

position:1350597:-1
position: 1350597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350856:-1
position: 1350856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1349955-1350033:-1:exon

position:1349955:-1
position: 1349955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350033:-1
position: 1350033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1349472-1349576:-1:exon

position:1349472:-1
position: 1349472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1349576:-1
position: 1349576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1346531-1348063:-1:exon

position:1348063:-1
position: 1348063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS9D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: VPS9D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: VPS9 domain-containing protein 1
translation: MSERDGWPLQGAMRMVKAAVQLDAEGRALDAYRAYLSSIAHVSQALLTVAEERPAANGATAGLSALEDKLLRLVEHSVERARATGTSLPAQRDHCTDGCRDVHVAGSAGERGADADGGCPPSVKTAAQPGPESTVEGDRPLPKPWTNIPCAFPSPTLFQKQQQEASVSFKRKLGPVEEARVQNMKLMAAYRARMSRLDPRHASAKTALNLSLERRMMENLLIAKAQETALQRKMVERRQRLREEADRRLSQNAAPSATEPERRSVLARVLEYEQDNEWPRQWKARLRERPDDSTLVSALISTLLSCGEHPLTQLLQEQQLRVYKKLHPLVSKSTQGQLGDGGDGGSGSGGSGTPEAAAAAPAPSALSPLGPDVASHGADCGITERTKRADDGHAVVVQKLAPESWEERPSVKAGWEASPDSRVEDVRGVSRDGSFEELGVELTGREGELLRGGDEEGGRGNAALRFMEEQALREHLKIIVNDVHTCMDSLLELCVLAFEQLESPAGRDQCLASLEEAFFKPLWPPLLALFRMVHGEEERALATWMAAYALATPGDLGVPPELRLVPGSGRPGGPRDAAATDLSSEGDGRVDFPYGAAVEELRNLAQHCCPQRKLDCIVRTTRQVCECVESFYEHQEAGLSPPSIGADDLLPILAFVVLRSQLPQLISECAALEEFIHEGYLMGEEGYCLTSVQTALNSVTSLPIPCGQTPT
SIO_010081: VPS9D1
subclass of: SO_0000673
so part of: VPS9D1
location: complement(join(1347964..1348063,1349472..1349576,1349955..1350033,1350597..1350856,1351684..1351813,1353574..1353762,1354272..1354630,1356711..1356796,1358895..1358982,1360045..1360097,1360345..1360407,1360672..1360783,1361190..1361412,1362350..1362454,1364020..1364116,1371543..1371629))
location: region:1347964-1371629:-1
so has part: feature:1371543-1371629:-1:exon
so has part: feature:1364020-1364116:-1:exon
so has part: feature:1362350-1362454:-1:exon
so has part: feature:1361190-1361412:-1:exon
so has part: feature:1360672-1360783:-1:exon
so has part: feature:1360345-1360407:-1:exon
so has part: feature:1360045-1360097:-1:exon
so has part: feature:1358895-1358982:-1:exon
so has part: feature:1356711-1356796:-1:exon
so has part: feature:1354272-1354630:-1:exon
so has part: feature:1353574-1353762:-1:exon
so has part: feature:1351684-1351813:-1:exon
so has part: feature:1350597-1350856:-1:exon
so has part: feature:1349955-1350033:-1:exon
so has part: feature:1349472-1349576:-1:exon
so has part: feature:1347964-1348063:-1:exon

XP_032823462.1
type: Protein
SIO_000068: ncbiprotein

position:1347964:-1
position: 1347964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1371629:-1
position: 1371629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1371543-1371629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1364020-1364116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1362350-1362454:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361190-1361412:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1360672-1360783:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1360345-1360407:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1360045-1360097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1358895-1358982:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1356711-1356796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1354272-1354630:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1353574-1353762:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1351684-1351813:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1350597-1350856:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1349955-1350033:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1349472-1349576:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1347964-1348063:-1:exon

LOC116950112
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950112
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1374859..1393153)
location: region:1374859-1393153:-1
so has part: feature:1374859-1393153:-1:exon
subclass of: SO_0000010

116950112
type: Gene
SIO_000068: ncbigene

position:1374859:-1
position: 1374859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1393153:-1
position: 1393153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1374859-1393153:-1:exon

LOC116950112
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950112
product: testin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032967572.1
SIO_010081: LOC116950112
subclass of: SO_0000673
so part of: LOC116950112
location: complement(join(1374859..1378312,1379592..1379750,1380031..1380246,1380543..1380748,1380809..1381257,1381826..1381947,1387252..1387888,1390721..1390806,1393053..1393153))
location: region:1374859-1393153:-1
so has part: feature:1393053-1393153:-1:exon
so has part: feature:1390721-1390806:-1:exon
so has part: feature:1387252-1387888:-1:exon
so has part: feature:1381826-1381947:-1:exon
so has part: feature:1380809-1381257:-1:exon
so has part: feature:1380543-1380748:-1:exon
so has part: feature:1380031-1380246:-1:exon
so has part: feature:1379592-1379750:-1:exon
so has part: feature:1374859-1378312:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1393053-1393153:-1:exon

position:1393053:-1
position: 1393053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1390721-1390806:-1:exon

position:1390721:-1
position: 1390721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1390806:-1
position: 1390806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1387252-1387888:-1:exon

position:1387252:-1
position: 1387252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1387888:-1
position: 1387888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1381826-1381947:-1:exon

position:1381826:-1
position: 1381826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1381947:-1
position: 1381947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1380809-1381257:-1:exon

position:1380809:-1
position: 1380809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1381257:-1
position: 1381257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1380543-1380748:-1:exon

position:1380543:-1
position: 1380543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380748:-1
position: 1380748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1380031-1380246:-1:exon

position:1380031:-1
position: 1380031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380246:-1
position: 1380246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1379592-1379750:-1:exon

position:1379592:-1
position: 1379592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379750:-1
position: 1379750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1374859-1378312:-1:exon

position:1378312:-1
position: 1378312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116950112
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950112
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testin-like
translation: MEREHKKGTISHELGAGAPCLKCREKCDGFELHFWRKICRNCKCGLEEHDIQMEEEAQRKVGRLFEDSRYAGVADRIRSDMETRLLEQQPRRVGGHNHRIVLDDRSPSTQLSFSSLSIGSSSSSSSNFDSGFDSASLASSGSGMPRSAGAGPGDGKVSGSAAGGEPGLPRAPGSAPETATGRDSKTGGSVGGPPGGPGSVQLSGSGTAPPAAGVPSRVPGAAGATVAGGDVRSAVVLEWAPPGLERAVARRYIELLPRDKQPIEGSQGAMYRRRQLARQLPEHDQDPSRCHDLSAAEVKQMEEFVKKYKAEALGVGDVMLPHQVLLIQGGAGGGFTHGMGPGATGSASSAHGSGAGGGGHTSAPPVGGELAGGAADSPSRKRVTASLFIAGRKPGAGAADQSQANNEGLSGQSGAAGLKSGSWNQAAGGGSSQRGGAGGAGASGGFGSATGGGGAGAAGGAGGGAGGGAGGGAGWVGGSAAFAQAAGEASAGERGVGDGAAQAQRDYRCNRCKQPMQQGDPAVFAERAGSEHLWHPGCFCCSACDEILVDLVYFWKRGKLYCGRHYCDTERPRCGGCDELIFSKEYTQAEEQNWHLKHFCCFECDCVLAGEIYVMEQDKPVCKPCYMKKYARSCQSCQGSIEPEAQRVTLGEFSWHADPTCFLCSCCGIPLVGLRFLPHQAMIFCSADCRGKVVG
SIO_010081: LOC116950112
subclass of: SO_0000673
so part of: LOC116950112
location: complement(join(1378121..1378312,1379592..1379750,1380031..1380246,1380543..1380748,1380809..1381257,1381826..1381947,1387252..1387888,1390721..1390806,1393053..1393073))
location: region:1378121-1393073:-1
so has part: feature:1393053-1393073:-1:exon
so has part: feature:1390721-1390806:-1:exon
so has part: feature:1387252-1387888:-1:exon
so has part: feature:1381826-1381947:-1:exon
so has part: feature:1380809-1381257:-1:exon
so has part: feature:1380543-1380748:-1:exon
so has part: feature:1380031-1380246:-1:exon
so has part: feature:1379592-1379750:-1:exon
so has part: feature:1378121-1378312:-1:exon

XP_032823463.1
type: Protein
SIO_000068: ncbiprotein

position:1378121:-1
position: 1378121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1393073:-1
position: 1393073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1393053-1393073:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1390721-1390806:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1387252-1387888:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1381826-1381947:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1380809-1381257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1380543-1380748:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1380031-1380246:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1379592-1379750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1378121-1378312:-1:exon

RNF10
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: RNF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1395963..1420207)
location: region:1395963-1420207:-1
so has part: feature:1395963-1420207:-1:exon
subclass of: SO_0000010

116950113
type: Gene
SIO_000068: ncbigene

position:1395963:-1
position: 1395963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1420207:-1
position: 1420207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1395963-1420207:-1:exon

RNF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: RNF10
product: ring finger protein 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_032967575.1
SIO_010081: RNF10
subclass of: SO_0000673
so part of: RNF10
location: complement(join(1395963..1396286,1397477..1397647,1398709..1398766,1399547..1399647,1401580..1401747,1403559..1403660,1405267..1405384,1406237..1406370,1406938..1407169,1408028..1408168,1409016..1409173,1410557..1410693,1411382..1411566,1413683..1413773,1414199..1414398,1416074..1416264,1419833..1420207))
location: region:1395963-1420207:-1
so has part: feature:1419833-1420207:-1:exon
so has part: feature:1416074-1416264:-1:exon
so has part: feature:1414199-1414398:-1:exon
so has part: feature:1413683-1413773:-1:exon
so has part: feature:1411382-1411566:-1:exon
so has part: feature:1410557-1410693:-1:exon
so has part: feature:1409016-1409173:-1:exon
so has part: feature:1408028-1408168:-1:exon
so has part: feature:1406938-1407169:-1:exon
so has part: feature:1406237-1406370:-1:exon
so has part: feature:1405267-1405384:-1:exon
so has part: feature:1403559-1403660:-1:exon
so has part: feature:1401580-1401747:-1:exon
so has part: feature:1399547-1399647:-1:exon
so has part: feature:1398709-1398766:-1:exon
so has part: feature:1397477-1397647:-1:exon
so has part: feature:1395963-1396286:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1419833-1420207:-1:exon

position:1419833:-1
position: 1419833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1416074-1416264:-1:exon

position:1416074:-1
position: 1416074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416264:-1
position: 1416264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1414199-1414398:-1:exon

position:1414199:-1
position: 1414199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414398:-1
position: 1414398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1413683-1413773:-1:exon

position:1413683:-1
position: 1413683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1413773:-1
position: 1413773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1411382-1411566:-1:exon

position:1411382:-1
position: 1411382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1411566:-1
position: 1411566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1410557-1410693:-1:exon

position:1410557:-1
position: 1410557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410693:-1
position: 1410693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1409016-1409173:-1:exon

position:1409016:-1
position: 1409016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409173:-1
position: 1409173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1408028-1408168:-1:exon

position:1408028:-1
position: 1408028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1408168:-1
position: 1408168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1406938-1407169:-1:exon

position:1406938:-1
position: 1406938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1407169:-1
position: 1407169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1406237-1406370:-1:exon

position:1406237:-1
position: 1406237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1406370:-1
position: 1406370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1405267-1405384:-1:exon

position:1405267:-1
position: 1405267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1405384:-1
position: 1405384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1403559-1403660:-1:exon

position:1403559:-1
position: 1403559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1403660:-1
position: 1403660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1401580-1401747:-1:exon

position:1401580:-1
position: 1401580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1401747:-1
position: 1401747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1399547-1399647:-1:exon

position:1399547:-1
position: 1399547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1399647:-1
position: 1399647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1398709-1398766:-1:exon

position:1398709:-1
position: 1398709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398766:-1
position: 1398766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1397477-1397647:-1:exon

position:1397477:-1
position: 1397477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1397647:-1
position: 1397647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1395963-1396286:-1:exon

position:1396286:-1
position: 1396286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: RNF10
product: ring finger protein 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_032967573.1
SIO_010081: RNF10
subclass of: SO_0000673
so part of: RNF10
location: complement(join(1395963..1396286,1397477..1397647,1398709..1398766,1399547..1399647,1401580..1401747,1403559..1403660,1405267..1405384,1406237..1406370,1406938..1407169,1408028..1408168,1409016..1409173,1410557..1410693,1411382..1411566,1413683..1413773,1414199..1414398,1416074..1416273,1419833..1420207))
location: region:1395963-1420207:-1
so has part: feature:1419833-1420207:-1:exon
so has part: feature:1416074-1416273:-1:exon
so has part: feature:1414199-1414398:-1:exon
so has part: feature:1413683-1413773:-1:exon
so has part: feature:1411382-1411566:-1:exon
so has part: feature:1410557-1410693:-1:exon
so has part: feature:1409016-1409173:-1:exon
so has part: feature:1408028-1408168:-1:exon
so has part: feature:1406938-1407169:-1:exon
so has part: feature:1406237-1406370:-1:exon
so has part: feature:1405267-1405384:-1:exon
so has part: feature:1403559-1403660:-1:exon
so has part: feature:1401580-1401747:-1:exon
so has part: feature:1399547-1399647:-1:exon
so has part: feature:1398709-1398766:-1:exon
so has part: feature:1397477-1397647:-1:exon
so has part: feature:1395963-1396286:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1419833-1420207:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1416074-1416273:-1:exon

position:1416273:-1
position: 1416273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1414199-1414398:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1413683-1413773:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1411382-1411566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1410557-1410693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409016-1409173:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1408028-1408168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406938-1407169:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1406237-1406370:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1405267-1405384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1403559-1403660:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1401580-1401747:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1399547-1399647:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398709-1398766:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1397477-1397647:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1395963-1396286:-1:exon

RNF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: RNF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 10 isoform X2
translation: MTESPDGSHVMERRASARAGHVTPAPPSRDAVRDAKPAGGGGRLRHGRKREVPQPFPKPEVVAGANRRATPQKNKTFDKRPPTRGAGKPAGTFTVGGGREEVMYDQQTELADLARGRKKVNVNHLFNFTLEPRERFSPYHPSTWSRKGGAWWGQKQKPFNKELFLQANCQFVVLDQCDYSVYLADPDTLVDWDLVQQVRLLSHGVLSCPICLYPPTAARITRCGHVFCWPCILHYLALSDEPWRKCPICFEAVHKKHLRSVVTKETHQFAVGDTVTLQLMKREKGSAIALPRSQWFQVDKPLSVIDAQNSHHCKLLLASRADVQTSLSLEQEQLLQQLLEESDTAEACFIQAALSELQNQLKCFEHAGADVGTTLEMQNLSLAEASEPDSHEVKEPTSLTNCNKQAVHRYASAFDEEFEEEVAKEVAEPDGAQEEEVQLEGAAGLAATEQQQQCLQQEGHGCEMLEEEEASSQNNLHHYYYQAEDGQHMYMLPMNRRCLLQEHGGPEGCPDRVTARIMDIESFSMTEYHRKRYNYLDHLPLTCEISFCEVVLHPPLVTQATLQYFTADIERRRVLRQKKARDERRRERKIEMEENKKHGIYPGMRVPLENLRQFPSFGSSPECGPGGPTDDTVVMEMSSPAVLHSPQDSSSNSSTAGSFLSPLAPAFVPGSPSAVESIVEDESHLPSFAQMLKDGKAKSDAWQRNVDKRAPAHAAAVGSGVDSDAESDSEGMPVPSFQNSFSQSLESALLTLEAAAVDETKAAASSDCPAQGKGGKKKKKQMKLLFSSSVFHGKIN
SIO_010081: RNF10
subclass of: SO_0000673
so part of: RNF10
location: complement(join(1396195..1396286,1397477..1397647,1398709..1398766,1399547..1399647,1401580..1401747,1403559..1403660,1405267..1405384,1406237..1406370,1406938..1407169,1408028..1408168,1409016..1409173,1410557..1410693,1411382..1411566,1413683..1413773,1414199..1414398,1416074..1416264,1419833..1419944))
location: region:1396195-1419944:-1
so has part: feature:1419833-1419944:-1:exon
so has part: feature:1416074-1416264:-1:exon
so has part: feature:1414199-1414398:-1:exon
so has part: feature:1413683-1413773:-1:exon
so has part: feature:1411382-1411566:-1:exon
so has part: feature:1410557-1410693:-1:exon
so has part: feature:1409016-1409173:-1:exon
so has part: feature:1408028-1408168:-1:exon
so has part: feature:1406938-1407169:-1:exon
so has part: feature:1406237-1406370:-1:exon
so has part: feature:1405267-1405384:-1:exon
so has part: feature:1403559-1403660:-1:exon
so has part: feature:1401580-1401747:-1:exon
so has part: feature:1399547-1399647:-1:exon
so has part: feature:1398709-1398766:-1:exon
so has part: feature:1397477-1397647:-1:exon
so has part: feature:1396195-1396286:-1:exon

XP_032823466.1
type: Protein
SIO_000068: ncbiprotein

position:1396195:-1
position: 1396195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1419944:-1
position: 1419944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1419833-1419944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1416074-1416264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1414199-1414398:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1413683-1413773:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1411382-1411566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1410557-1410693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409016-1409173:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1408028-1408168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406938-1407169:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1406237-1406370:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1405267-1405384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1403559-1403660:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1401580-1401747:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1399547-1399647:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398709-1398766:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1397477-1397647:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1396195-1396286:-1:exon

RNF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: RNF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 10 isoform X1
translation: MTESPDGSHVMERRASARAGHVTPAPPSRDAVRDAKPDAKAGGGGRLRHGRKREVPQPFPKPEVVAGANRRATPQKNKTFDKRPPTRGAGKPAGTFTVGGGREEVMYDQQTELADLARGRKKVNVNHLFNFTLEPRERFSPYHPSTWSRKGGAWWGQKQKPFNKELFLQANCQFVVLDQCDYSVYLADPDTLVDWDLVQQVRLLSHGVLSCPICLYPPTAARITRCGHVFCWPCILHYLALSDEPWRKCPICFEAVHKKHLRSVVTKETHQFAVGDTVTLQLMKREKGSAIALPRSQWFQVDKPLSVIDAQNSHHCKLLLASRADVQTSLSLEQEQLLQQLLEESDTAEACFIQAALSELQNQLKCFEHAGADVGTTLEMQNLSLAEASEPDSHEVKEPTSLTNCNKQAVHRYASAFDEEFEEEVAKEVAEPDGAQEEEVQLEGAAGLAATEQQQQCLQQEGHGCEMLEEEEASSQNNLHHYYYQAEDGQHMYMLPMNRRCLLQEHGGPEGCPDRVTARIMDIESFSMTEYHRKRYNYLDHLPLTCEISFCEVVLHPPLVTQATLQYFTADIERRRVLRQKKARDERRRERKIEMEENKKHGIYPGMRVPLENLRQFPSFGSSPECGPGGPTDDTVVMEMSSPAVLHSPQDSSSNSSTAGSFLSPLAPAFVPGSPSAVESIVEDESHLPSFAQMLKDGKAKSDAWQRNVDKRAPAHAAAVGSGVDSDAESDSEGMPVPSFQNSFSQSLESALLTLEAAAVDETKAAASSDCPAQGKGGKKKKKQMKLLFSSSVFHGKIN
SIO_010081: RNF10
subclass of: SO_0000673
so part of: RNF10
location: complement(join(1396195..1396286,1397477..1397647,1398709..1398766,1399547..1399647,1401580..1401747,1403559..1403660,1405267..1405384,1406237..1406370,1406938..1407169,1408028..1408168,1409016..1409173,1410557..1410693,1411382..1411566,1413683..1413773,1414199..1414398,1416074..1416273,1419833..1419944))
location: region:1396195-1419944:-1
so has part: feature:1419833-1419944:-1:exon
so has part: feature:1416074-1416273:-1:exon
so has part: feature:1414199-1414398:-1:exon
so has part: feature:1413683-1413773:-1:exon
so has part: feature:1411382-1411566:-1:exon
so has part: feature:1410557-1410693:-1:exon
so has part: feature:1409016-1409173:-1:exon
so has part: feature:1408028-1408168:-1:exon
so has part: feature:1406938-1407169:-1:exon
so has part: feature:1406237-1406370:-1:exon
so has part: feature:1405267-1405384:-1:exon
so has part: feature:1403559-1403660:-1:exon
so has part: feature:1401580-1401747:-1:exon
so has part: feature:1399547-1399647:-1:exon
so has part: feature:1398709-1398766:-1:exon
so has part: feature:1397477-1397647:-1:exon
so has part: feature:1396195-1396286:-1:exon

XP_032823464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1419833-1419944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1416074-1416273:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1414199-1414398:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1413683-1413773:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1411382-1411566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1410557-1410693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409016-1409173:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1408028-1408168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406938-1407169:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1406237-1406370:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1405267-1405384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1403559-1403660:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1401580-1401747:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1399547-1399647:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398709-1398766:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1397477-1397647:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1396195-1396286:-1:exon

LOC116950114
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1423138..1432006
location: region:1423138-1432006:1
so has part: feature:1423138-1432006:1:exon
subclass of: SO_0000010

116950114
type: Gene
SIO_000068: ncbigene

position:1423138:1
position: 1423138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1432006:1
position: 1432006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1423138-1432006:1:exon

LOC116950114
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950114
product: protein enabled homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032967577.1
SIO_010081: LOC116950114
subclass of: SO_0000673
so part of: LOC116950114
location: join(1423138..1423821,1426389..1426611,1427393..1427516,1428901..1429094,1430137..1430201,1430763..1430888,1431454..1432006)
location: region:1423138-1432006:1
so has part: feature:1423138-1423821:1:exon
so has part: feature:1426389-1426611:1:exon
so has part: feature:1427393-1427516:1:exon
so has part: feature:1428901-1429094:1:exon
so has part: feature:1430137-1430201:1:exon
so has part: feature:1430763-1430888:1:exon
so has part: feature:1431454-1432006:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1423138-1423821:1:exon

position:1423821:1
position: 1423821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1426389-1426611:1:exon

position:1426389:1
position: 1426389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1426611:1
position: 1426611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1427393-1427516:1:exon

position:1427393:1
position: 1427393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427516:1
position: 1427516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1428901-1429094:1:exon

position:1428901:1
position: 1428901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429094:1
position: 1429094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1430137-1430201:1:exon

position:1430137:1
position: 1430137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430201:1
position: 1430201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1430763-1430888:1:exon

position:1430763:1
position: 1430763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430888:1
position: 1430888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1431454-1432006:1:exon

position:1431454:1
position: 1431454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116950114
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950114
product: protein enabled homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032967576.1
SIO_010081: LOC116950114
subclass of: SO_0000673
so part of: LOC116950114
location: join(1423139..1423821,1426389..1426611,1427393..1427516,1428901..1429094,1430137..1430201,1430760..1430888,1431454..1432006)
location: region:1423139-1432006:1
so has part: feature:1423139-1423821:1:exon
so has part: feature:1426389-1426611:1:exon
so has part: feature:1427393-1427516:1:exon
so has part: feature:1428901-1429094:1:exon
so has part: feature:1430137-1430201:1:exon
so has part: feature:1430760-1430888:1:exon
so has part: feature:1431454-1432006:1:exon

position:1423139:1
position: 1423139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1423139-1423821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1426389-1426611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427393-1427516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1428901-1429094:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1430137-1430201:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1430760-1430888:1:exon

position:1430760:1
position: 1430760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1431454-1432006:1:exon

LOC116950114
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein enabled homolog isoform X1
translation: MECMDEFDPEVPLRVTYCHTLSQEEFEEQGSAHTSAALAELIRTLAQHPQLHARTLRRRRQEQAEEAGVFSFIKAKFCLLVQGENNECSTVGDEELQREIEALREQMNQAFQYAQEAKDGRRRFSKRLAEKQRNCMPPPPTTPPPTALPPLAPPPTAPPPPAPPLPKAQVPLKERTNPMANAVAQTPELLKSYGLTSLNKKRSVGDAKTSRNAGESLAVCAASNWQDELVSSLRSKRLKTTGAVRSPGGTPVNAAVKGRDSINNHMSPASTIKAALITKFQKVSSPASSDRSWYSLNGSFL
SIO_010081: LOC116950114
subclass of: SO_0000673
so part of: LOC116950114
location: join(1426390..1426611,1427393..1427516,1428901..1429094,1430137..1430201,1430760..1430888,1431454..1431625)
location: region:1426390-1431625:1
so has part: feature:1426390-1426611:1:exon
so has part: feature:1427393-1427516:1:exon
so has part: feature:1428901-1429094:1:exon
so has part: feature:1430137-1430201:1:exon
so has part: feature:1430760-1430888:1:exon
so has part: feature:1431454-1431625:1:exon

XP_032823467.1
type: Protein
SIO_000068: ncbiprotein

position:1426390:1
position: 1426390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431625:1
position: 1431625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1426390-1426611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1427393-1427516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1428901-1429094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1430137-1430201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1430760-1430888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1431454-1431625:1:exon

LOC116950114
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: shootin-1-like isoform X2
translation: MECMDEFDPEVPLRVTYCHTLSQEEFEEQGSAHTSAALAELIRTLAQHPQLHARTLRRRRQEQAEEAGVFSFIKAKFCLLVQGENNECSTVGDEELQREIEALREQMNQAFQYAQEAKDGRRRFSKRLAEKQRNCMPPPPTTPPPTALPPLAPPPTAPPPPAPPLPKAQVPLKERTNPMANAVAQTPELLKSYGLTSLNKKRVGDAKTSRNAGESLAVCAASNWQDELVSSLRSKRLKTTGAVRSPGGTPVNAAVKGRDSINNHMSPASTIKAALITKFQKVSSPASSDRSWYSLNGSFL
SIO_010081: LOC116950114
subclass of: SO_0000673
so part of: LOC116950114
location: join(1426390..1426611,1427393..1427516,1428901..1429094,1430137..1430201,1430763..1430888,1431454..1431625)
location: region:1426390-1431625:1
so has part: feature:1426390-1426611:1:exon
so has part: feature:1427393-1427516:1:exon
so has part: feature:1428901-1429094:1:exon
so has part: feature:1430137-1430201:1:exon
so has part: feature:1430763-1430888:1:exon
so has part: feature:1431454-1431625:1:exon

XP_032823468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1426390-1426611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1427393-1427516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1428901-1429094:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1430137-1430201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1430763-1430888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1431454-1431625:1:exon

SIRT4
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: SIRT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1438318..1447451)
location: region:1438318-1447451:-1
so has part: feature:1438318-1447451:-1:exon
subclass of: SO_0000010

116950115
type: Gene
SIO_000068: ncbigene

position:1438318:-1
position: 1438318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1447451:-1
position: 1447451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1438318-1447451:-1:exon

SIRT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: SIRT4
product: sirtuin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032967578.1
SIO_010081: SIRT4
subclass of: SO_0000673
so part of: SIRT4
location: complement(join(1438318..1440684,1441392..1441550,1443487..1443600,1444521..1444913,1445484..1445563,1447338..1447451))
location: region:1438318-1447451:-1
so has part: feature:1447338-1447451:-1:exon
so has part: feature:1445484-1445563:-1:exon
so has part: feature:1444521-1444913:-1:exon
so has part: feature:1443487-1443600:-1:exon
so has part: feature:1441392-1441550:-1:exon
so has part: feature:1438318-1440684:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1447338-1447451:-1:exon

position:1447338:-1
position: 1447338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1445484-1445563:-1:exon

position:1445484:-1
position: 1445484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445563:-1
position: 1445563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1444521-1444913:-1:exon

position:1444521:-1
position: 1444521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1444913:-1
position: 1444913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1443487-1443600:-1:exon

position:1443487:-1
position: 1443487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1443600:-1
position: 1443600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1441392-1441550:-1:exon

position:1441392:-1
position: 1441392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441550:-1
position: 1441550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1438318-1440684:-1:exon

position:1440684:-1
position: 1440684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SIRT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: SIRT4
product: sirtuin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_032967579.1
SIO_010081: SIRT4
subclass of: SO_0000673
so part of: SIRT4
location: complement(join(1438318..1440684,1441392..1441550,1443487..1443600,1444521..1445047,1445484..1445563,1447263..1447425))
location: region:1438318-1447425:-1
so has part: feature:1447263-1447425:-1:exon
so has part: feature:1445484-1445563:-1:exon
so has part: feature:1444521-1445047:-1:exon
so has part: feature:1443487-1443600:-1:exon
so has part: feature:1441392-1441550:-1:exon
so has part: feature:1438318-1440684:-1:exon

position:1447425:-1
position: 1447425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1447263-1447425:-1:exon

position:1447263:-1
position: 1447263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1445484-1445563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1444521-1445047:-1:exon

position:1445047:-1
position: 1445047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1443487-1443600:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1441392-1441550:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1438318-1440684:-1:exon

SIRT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: SIRT4
product: sirtuin 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032967581.1
SIO_010081: SIRT4
subclass of: SO_0000673
so part of: SIRT4
location: complement(join(1438318..1440684,1441392..1441550,1443487..1443600,1444521..1445047,1445484..1445588,1447338..1447406))
location: region:1438318-1447406:-1
so has part: feature:1447338-1447406:-1:exon
so has part: feature:1445484-1445588:-1:exon
so has part: feature:1444521-1445047:-1:exon
so has part: feature:1443487-1443600:-1:exon
so has part: feature:1441392-1441550:-1:exon
so has part: feature:1438318-1440684:-1:exon

position:1447406:-1
position: 1447406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1447338-1447406:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1445484-1445588:-1:exon

position:1445588:-1
position: 1445588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1444521-1445047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1443487-1443600:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1441392-1441550:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1438318-1440684:-1:exon

SIRT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: SIRT4
product: sirtuin 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032967580.1
SIO_010081: SIRT4
subclass of: SO_0000673
so part of: SIRT4
location: complement(join(1438318..1440684,1441392..1441550,1443487..1443600,1444521..1445047,1445484..1445588,1446661..1446697))
location: region:1438318-1446697:-1
so has part: feature:1446661-1446697:-1:exon
so has part: feature:1445484-1445588:-1:exon
so has part: feature:1444521-1445047:-1:exon
so has part: feature:1443487-1443600:-1:exon
so has part: feature:1441392-1441550:-1:exon
so has part: feature:1438318-1440684:-1:exon

position:1446697:-1
position: 1446697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1446661-1446697:-1:exon

position:1446661:-1
position: 1446661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1445484-1445588:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1444521-1445047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1443487-1443600:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1441392-1441550:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1438318-1440684:-1:exon

SIRT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: SIRT4
product: sirtuin 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_032967582.1
SIO_010081: SIRT4
subclass of: SO_0000673
so part of: SIRT4
location: complement(join(1438318..1440684,1441392..1441550,1443487..1443600,1444521..1445047,1445484..1445563,1446661..1446683))
location: region:1438318-1446683:-1
so has part: feature:1446661-1446683:-1:exon
so has part: feature:1445484-1445563:-1:exon
so has part: feature:1444521-1445047:-1:exon
so has part: feature:1443487-1443600:-1:exon
so has part: feature:1441392-1441550:-1:exon
so has part: feature:1438318-1440684:-1:exon

position:1446683:-1
position: 1446683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1446661-1446683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1445484-1445563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1444521-1445047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1443487-1443600:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1441392-1441550:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1438318-1440684:-1:exon

SIRT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: SIRT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein lipoamidase sirtuin-4, mitochondrial isoform X1
translation: MDGPLTGVATWRRPARGHVLLQCGVTCVVDSRLIELRSCTPVRAVKTPTTFRLNSRQCGQLQDFLANSRRLFVLAGAGLSTESGIPDYRSEGVGLYARTSRRPMQHAEFARSAVARRRYWARNFTGWPRFSSRRPNAAHLALGRWEQQGRLHWLVTQNVDALHAKAGSRRITELHGCSHRVVCLDCKEVTQRTELQQRMLDMNPGWQQQHEQAIAPDGDVLLSDSQVESFRVPPCRSCGGPLKPEVTFFGDNVDRRTVDDVYQRLWESDTVLVAGSSLQVYSGYRFIRAAYEEKIPIAILNIGPTRADALAQLKVSSRCGDILPLMLPGSH
SIO_010081: SIRT4
subclass of: SO_0000673
so part of: SIRT4
location: complement(join(1440526..1440684,1441392..1441550,1443487..1443600,1444521..1444913,1445484..1445563,1447338..1447428))
location: region:1440526-1447428:-1
so has part: feature:1447338-1447428:-1:exon
so has part: feature:1445484-1445563:-1:exon
so has part: feature:1444521-1444913:-1:exon
so has part: feature:1443487-1443600:-1:exon
so has part: feature:1441392-1441550:-1:exon
so has part: feature:1440526-1440684:-1:exon

XP_032823469.1
type: Protein
SIO_000068: ncbiprotein

position:1440526:-1
position: 1440526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1447428:-1
position: 1447428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1447338-1447428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1445484-1445563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1444521-1444913:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1443487-1443600:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1441392-1441550:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1440526-1440684:-1:exon

SIRT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: SIRT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein lipoamidase sirtuin-4, mitochondrial isoform X2
translation: MVWLVLSLARAVKRPDLRPRWCSSPAASPDLAFVPACAPAGTQQCGQLQDFLANSRRLFVLAGAGLSTESGIPDYRSEGVGLYARTSRRPMQHAEFARSAVARRRYWARNFTGWPRFSSRRPNAAHLALGRWEQQGRLHWLVTQNVDALHAKAGSRRITELHGCSHRVVCLDCKEVTQRTELQQRMLDMNPGWQQQHEQAIAPDGDVLLSDSQVESFRVPPCRSCGGPLKPEVTFFGDNVDRRTVDDVYQRLWESDTVLVAGSSLQVYSGYRFIRAAYEEKIPIAILNIGPTRADALAQLKVSSRCGDILPLMLPGSH
SIO_010081: SIRT4
subclass of: SO_0000673
so part of: SIRT4
location: complement(join(1440526..1440684,1441392..1441550,1443487..1443600,1444521..1445045))
location: region:1440526-1445045:-1
so has part: feature:1444521-1445045:-1:exon
so has part: feature:1443487-1443600:-1:exon
so has part: feature:1441392-1441550:-1:exon
so has part: feature:1440526-1440684:-1:exon

XP_032823470.1
type: Protein
SIO_000068: ncbiprotein

position:1445045:-1
position: 1445045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1444521-1445045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1443487-1443600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441392-1441550:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1440526-1440684:-1:exon

SIRT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: SIRT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein lipoamidase sirtuin-4, mitochondrial isoform X2
translation: MVWLVLSLARAVKRPDLRPRWCSSPAASPDLAFVPACAPAGTQQCGQLQDFLANSRRLFVLAGAGLSTESGIPDYRSEGVGLYARTSRRPMQHAEFARSAVARRRYWARNFTGWPRFSSRRPNAAHLALGRWEQQGRLHWLVTQNVDALHAKAGSRRITELHGCSHRVVCLDCKEVTQRTELQQRMLDMNPGWQQQHEQAIAPDGDVLLSDSQVESFRVPPCRSCGGPLKPEVTFFGDNVDRRTVDDVYQRLWESDTVLVAGSSLQVYSGYRFIRAAYEEKIPIAILNIGPTRADALAQLKVSSRCGDILPLMLPGSH
SIO_010081: SIRT4
subclass of: SO_0000673
so part of: SIRT4
location: complement(join(1440526..1440684,1441392..1441550,1443487..1443600,1444521..1445045))
location: region:1440526-1445045:-1
so has part: feature:1444521-1445045:-1:exon
so has part: feature:1443487-1443600:-1:exon
so has part: feature:1441392-1441550:-1:exon
so has part: feature:1440526-1440684:-1:exon

XP_032823471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1444521-1445045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1443487-1443600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441392-1441550:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1440526-1440684:-1:exon

SIRT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: SIRT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein lipoamidase sirtuin-4, mitochondrial isoform X2
translation: MVWLVLSLARAVKRPDLRPRWCSSPAASPDLAFVPACAPAGTQQCGQLQDFLANSRRLFVLAGAGLSTESGIPDYRSEGVGLYARTSRRPMQHAEFARSAVARRRYWARNFTGWPRFSSRRPNAAHLALGRWEQQGRLHWLVTQNVDALHAKAGSRRITELHGCSHRVVCLDCKEVTQRTELQQRMLDMNPGWQQQHEQAIAPDGDVLLSDSQVESFRVPPCRSCGGPLKPEVTFFGDNVDRRTVDDVYQRLWESDTVLVAGSSLQVYSGYRFIRAAYEEKIPIAILNIGPTRADALAQLKVSSRCGDILPLMLPGSH
SIO_010081: SIRT4
subclass of: SO_0000673
so part of: SIRT4
location: complement(join(1440526..1440684,1441392..1441550,1443487..1443600,1444521..1445045))
location: region:1440526-1445045:-1
so has part: feature:1444521-1445045:-1:exon
so has part: feature:1443487-1443600:-1:exon
so has part: feature:1441392-1441550:-1:exon
so has part: feature:1440526-1440684:-1:exon

XP_032823472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1444521-1445045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1443487-1443600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441392-1441550:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1440526-1440684:-1:exon

SIRT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: SIRT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein lipoamidase sirtuin-4, mitochondrial isoform X2
translation: MVWLVLSLARAVKRPDLRPRWCSSPAASPDLAFVPACAPAGTQQCGQLQDFLANSRRLFVLAGAGLSTESGIPDYRSEGVGLYARTSRRPMQHAEFARSAVARRRYWARNFTGWPRFSSRRPNAAHLALGRWEQQGRLHWLVTQNVDALHAKAGSRRITELHGCSHRVVCLDCKEVTQRTELQQRMLDMNPGWQQQHEQAIAPDGDVLLSDSQVESFRVPPCRSCGGPLKPEVTFFGDNVDRRTVDDVYQRLWESDTVLVAGSSLQVYSGYRFIRAAYEEKIPIAILNIGPTRADALAQLKVSSRCGDILPLMLPGSH
SIO_010081: SIRT4
subclass of: SO_0000673
so part of: SIRT4
location: complement(join(1440526..1440684,1441392..1441550,1443487..1443600,1444521..1445045))
location: region:1440526-1445045:-1
so has part: feature:1444521-1445045:-1:exon
so has part: feature:1443487-1443600:-1:exon
so has part: feature:1441392-1441550:-1:exon
so has part: feature:1440526-1440684:-1:exon

XP_032823473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1444521-1445045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1443487-1443600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441392-1441550:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1440526-1440684:-1:exon

NIF3L1
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: NIF3L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1448444..1457110
location: region:1448444-1457110:1
so has part: feature:1448444-1457110:1:exon
subclass of: SO_0000010

116950116
type: Gene
SIO_000068: ncbigene

position:1448444:1
position: 1448444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1457110:1
position: 1457110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1448444-1457110:1:exon

NIF3L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: NIF3L1
product: NGG1 interacting factor 3 like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032967586.1
SIO_010081: NIF3L1
subclass of: SO_0000673
so part of: NIF3L1
location: join(1448444..1448731,1451178..1451418,1451978..1452341,1453086..1453245,1454345..1454480,1455191..1455329,1455667..1455750,1456043..1457110)
location: region:1448444-1457110:1
so has part: feature:1448444-1448731:1:exon
so has part: feature:1451178-1451418:1:exon
so has part: feature:1451978-1452341:1:exon
so has part: feature:1453086-1453245:1:exon
so has part: feature:1454345-1454480:1:exon
so has part: feature:1455191-1455329:1:exon
so has part: feature:1455667-1455750:1:exon
so has part: feature:1456043-1457110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1448444-1448731:1:exon

position:1448731:1
position: 1448731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1451178-1451418:1:exon

position:1451178:1
position: 1451178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451418:1
position: 1451418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1451978-1452341:1:exon

position:1451978:1
position: 1451978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1452341:1
position: 1452341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1453086-1453245:1:exon

position:1453086:1
position: 1453086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453245:1
position: 1453245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1454345-1454480:1:exon

position:1454345:1
position: 1454345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1454480:1
position: 1454480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1455191-1455329:1:exon

position:1455191:1
position: 1455191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1455329:1
position: 1455329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1455667-1455750:1:exon

position:1455667:1
position: 1455667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1455750:1
position: 1455750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1456043-1457110:1:exon

position:1456043:1
position: 1456043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NIF3L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: NIF3L1
product: NGG1 interacting factor 3 like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_032967584.1
SIO_010081: NIF3L1
subclass of: SO_0000673
so part of: NIF3L1
location: join(1448913..1449066,1451178..1451418,1451978..1452341,1453086..1453245,1454345..1454480,1455191..1455329,1455667..1455750,1456043..1457110)
location: region:1448913-1457110:1
so has part: feature:1448913-1449066:1:exon
so has part: feature:1451178-1451418:1:exon
so has part: feature:1451978-1452341:1:exon
so has part: feature:1453086-1453245:1:exon
so has part: feature:1454345-1454480:1:exon
so has part: feature:1455191-1455329:1:exon
so has part: feature:1455667-1455750:1:exon
so has part: feature:1456043-1457110:1:exon

position:1448913:1
position: 1448913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1448913-1449066:1:exon

position:1449066:1
position: 1449066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1451178-1451418:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1451978-1452341:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1453086-1453245:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1454345-1454480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1455191-1455329:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1455667-1455750:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1456043-1457110:1:exon

NIF3L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: NIF3L1
product: NGG1 interacting factor 3 like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_032967585.1
SIO_010081: NIF3L1
subclass of: SO_0000673
so part of: NIF3L1
location: join(1448972..1449244,1451178..1451418,1451978..1452341,1453086..1453245,1454345..1454480,1455191..1455329,1455667..1455750,1456043..1457110)
location: region:1448972-1457110:1
so has part: feature:1448972-1449244:1:exon
so has part: feature:1451178-1451418:1:exon
so has part: feature:1451978-1452341:1:exon
so has part: feature:1453086-1453245:1:exon
so has part: feature:1454345-1454480:1:exon
so has part: feature:1455191-1455329:1:exon
so has part: feature:1455667-1455750:1:exon
so has part: feature:1456043-1457110:1:exon

position:1448972:1
position: 1448972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1448972-1449244:1:exon

position:1449244:1
position: 1449244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1451178-1451418:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1451978-1452341:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1453086-1453245:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1454345-1454480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1455191-1455329:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1455667-1455750:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1456043-1457110:1:exon

NIF3L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: NIF3L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NIF3-like protein 1
translation: MSWVNVLPASKHPFFKTSLGFARRSFSRRLQWPSPQLKSQLTSAHWPTPSPGCSFAGRCWRLVTPCSSSSSTSVAGMELHAVVRTLEELAPPALAESWDNVGLLVEPSPPHCVSTLLLTNDLTEEVLQEAVRLPAQMVLSYHPPVFAPLRSLTMRSWKERLVVTALENRVAVYSPHTCYDALRGGVNDWLAEGLGEGSVTPLKTSEALKHLSQGSVHVTSAAKAADWPSLAAQLKAVSGLVLHTLPLQTTNEGGESAVMLSMNCTEGALPETLACLSNNEHAHRHTEITALRKPPFPGTGMGRLCTLAEPVSTSTLVSRIKQHLLLPHVRLALGAGKSPDSTVRTVALCAGSGGSVLKGVQADLYLTGELSHHEVLDAVSRGVSVILCEHSNTERGFLPRLRLLLLDKLQQKLNIHVSEVDRDPLTVV
SIO_010081: NIF3L1
subclass of: SO_0000673
so part of: NIF3L1
location: join(1451200..1451418,1451978..1452341,1453086..1453245,1454345..1454480,1455191..1455329,1455667..1455750,1456043..1456227)
location: region:1451200-1456227:1
so has part: feature:1451200-1451418:1:exon
so has part: feature:1451978-1452341:1:exon
so has part: feature:1453086-1453245:1:exon
so has part: feature:1454345-1454480:1:exon
so has part: feature:1455191-1455329:1:exon
so has part: feature:1455667-1455750:1:exon
so has part: feature:1456043-1456227:1:exon

XP_032823475.1
type: Protein
SIO_000068: ncbiprotein

position:1451200:1
position: 1451200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456227:1
position: 1456227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1451200-1451418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1451978-1452341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1453086-1453245:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1454345-1454480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1455191-1455329:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1455667-1455750:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1456043-1456227:1:exon

NIF3L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: NIF3L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NIF3-like protein 1
translation: MSWVNVLPASKHPFFKTSLGFARRSFSRRLQWPSPQLKSQLTSAHWPTPSPGCSFAGRCWRLVTPCSSSSSTSVAGMELHAVVRTLEELAPPALAESWDNVGLLVEPSPPHCVSTLLLTNDLTEEVLQEAVRLPAQMVLSYHPPVFAPLRSLTMRSWKERLVVTALENRVAVYSPHTCYDALRGGVNDWLAEGLGEGSVTPLKTSEALKHLSQGSVHVTSAAKAADWPSLAAQLKAVSGLVLHTLPLQTTNEGGESAVMLSMNCTEGALPETLACLSNNEHAHRHTEITALRKPPFPGTGMGRLCTLAEPVSTSTLVSRIKQHLLLPHVRLALGAGKSPDSTVRTVALCAGSGGSVLKGVQADLYLTGELSHHEVLDAVSRGVSVILCEHSNTERGFLPRLRLLLLDKLQQKLNIHVSEVDRDPLTVV
SIO_010081: NIF3L1
subclass of: SO_0000673
so part of: NIF3L1
location: join(1451200..1451418,1451978..1452341,1453086..1453245,1454345..1454480,1455191..1455329,1455667..1455750,1456043..1456227)
location: region:1451200-1456227:1
so has part: feature:1451200-1451418:1:exon
so has part: feature:1451978-1452341:1:exon
so has part: feature:1453086-1453245:1:exon
so has part: feature:1454345-1454480:1:exon
so has part: feature:1455191-1455329:1:exon
so has part: feature:1455667-1455750:1:exon
so has part: feature:1456043-1456227:1:exon

XP_032823476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1451200-1451418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1451978-1452341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1453086-1453245:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1454345-1454480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1455191-1455329:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1455667-1455750:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1456043-1456227:1:exon

NIF3L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: NIF3L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NIF3-like protein 1
translation: MSWVNVLPASKHPFFKTSLGFARRSFSRRLQWPSPQLKSQLTSAHWPTPSPGCSFAGRCWRLVTPCSSSSSTSVAGMELHAVVRTLEELAPPALAESWDNVGLLVEPSPPHCVSTLLLTNDLTEEVLQEAVRLPAQMVLSYHPPVFAPLRSLTMRSWKERLVVTALENRVAVYSPHTCYDALRGGVNDWLAEGLGEGSVTPLKTSEALKHLSQGSVHVTSAAKAADWPSLAAQLKAVSGLVLHTLPLQTTNEGGESAVMLSMNCTEGALPETLACLSNNEHAHRHTEITALRKPPFPGTGMGRLCTLAEPVSTSTLVSRIKQHLLLPHVRLALGAGKSPDSTVRTVALCAGSGGSVLKGVQADLYLTGELSHHEVLDAVSRGVSVILCEHSNTERGFLPRLRLLLLDKLQQKLNIHVSEVDRDPLTVV
SIO_010081: NIF3L1
subclass of: SO_0000673
so part of: NIF3L1
location: join(1451200..1451418,1451978..1452341,1453086..1453245,1454345..1454480,1455191..1455329,1455667..1455750,1456043..1456227)
location: region:1451200-1456227:1
so has part: feature:1451200-1451418:1:exon
so has part: feature:1451978-1452341:1:exon
so has part: feature:1453086-1453245:1:exon
so has part: feature:1454345-1454480:1:exon
so has part: feature:1455191-1455329:1:exon
so has part: feature:1455667-1455750:1:exon
so has part: feature:1456043-1456227:1:exon

XP_032823477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1451200-1451418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1451978-1452341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1453086-1453245:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1454345-1454480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1455191-1455329:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1455667-1455750:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1456043-1456227:1:exon

MRPL16
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: MRPL16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1459619..1464515
location: region:1459619-1464515:1
so has part: feature:1459619-1464515:1:exon
subclass of: SO_0000010

116950117
type: Gene
SIO_000068: ncbigene

position:1459619:1
position: 1459619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1464515:1
position: 1464515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1459619-1464515:1:exon

MRPL16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: MRPL16
product: mitochondrial ribosomal protein L16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_032967587.1
SIO_010081: MRPL16
subclass of: SO_0000673
so part of: MRPL16
location: join(1459619..1459916,1461747..1461818,1462216..1462364,1463850..1464515)
location: region:1459619-1464515:1
so has part: feature:1459619-1459916:1:exon
so has part: feature:1461747-1461818:1:exon
so has part: feature:1462216-1462364:1:exon
so has part: feature:1463850-1464515:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1459619-1459916:1:exon

position:1459916:1
position: 1459916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1461747-1461818:1:exon

position:1461747:1
position: 1461747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1461818:1
position: 1461818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1462216-1462364:1:exon

position:1462216:1
position: 1462216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1462364:1
position: 1462364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1463850-1464515:1:exon

position:1463850:1
position: 1463850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: MRPL16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L16, mitochondrial
translation: MAALLGRALGVLTAGGRGGGGGGCFCSALRAAGVPFRVPAVFTAGLKIFPQPEKFDDVVIPTKNKLKFVSKVPNYKKARKWTKQLSDIRGPARGNTSFTNGKFGIVALGGGYLHWGHMEMMRLAINRKMDSKNMFARWRVRAPYKPLTRKGLGQRMGGGKGAIDHYVTPVKYGQLVVEVGGRAEFTEAEGWLVEMANKLPFPAKAVSSEQLQEMQKTEEWRMENNENPWTFKRIVDNNMLGLRFTLSPYDIRYFGSFWGKFRLPS
SIO_010081: MRPL16
subclass of: SO_0000673
so part of: MRPL16
location: join(1459820..1459916,1461747..1461818,1462216..1462364,1463850..1464329)
location: region:1459820-1464329:1
so has part: feature:1459820-1459916:1:exon
so has part: feature:1461747-1461818:1:exon
so has part: feature:1462216-1462364:1:exon
so has part: feature:1463850-1464329:1:exon

XP_032823478.1
type: Protein
SIO_000068: ncbiprotein

position:1459820:1
position: 1459820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1464329:1
position: 1464329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1459820-1459916:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1461747-1461818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1462216-1462364:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1463850-1464329:1:exon

MRM3
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: MRM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1466780..1475025
location: region:1466780-1475025:1
so has part: feature:1466780-1475025:1:exon
subclass of: SO_0000010

116950119
type: Gene
SIO_000068: ncbigene

position:1466780:1
position: 1466780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1475025:1
position: 1475025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1466780-1475025:1:exon

MRM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: MRM3
product: mitochondrial rRNA methyltransferase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_032967590.1
SIO_010081: MRM3
subclass of: SO_0000673
so part of: MRM3
location: join(1466780..1467161,1469043..1469287,1469672..1469845,1470500..1470662,1473571..1475025)
location: region:1466780-1475025:1
so has part: feature:1466780-1467161:1:exon
so has part: feature:1469043-1469287:1:exon
so has part: feature:1469672-1469845:1:exon
so has part: feature:1470500-1470662:1:exon
so has part: feature:1473571-1475025:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1466780-1467161:1:exon

position:1467161:1
position: 1467161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1469043-1469287:1:exon

position:1469043:1
position: 1469043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469287:1
position: 1469287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1469672-1469845:1:exon

position:1469672:1
position: 1469672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469845:1
position: 1469845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1470500-1470662:1:exon

position:1470500:1
position: 1470500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470662:1
position: 1470662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1473571-1475025:1:exon

position:1473571:1
position: 1473571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: MRM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rRNA methyltransferase 3, mitochondrial
translation: MMTAVTTPALAACWNLAPCRFLLAPPAARWRSLSARTARGWRRPREPESPLGRPQDATPPDQLGPRGAARGRDTWRAERGAVLGVGDLRFERAGPDDKRLRTVVTIAKSRQYREKHGKILLEGTRLIRDALEAGAVLQTIFFDSVTQLQELPLELIARAALIRVRMRDIRLWSDLVTPQGLLAIFRRPDYASDKELRSRAEGSECLPISLVCDNVRDPGNMGTIIRSAAAVGCSKVLLIKGCVDVWEPKVLRAGAGAHFRVPLLPCLRWKDVPEILGVHTVVHVADNRPIGHTLSALDDEDVHDMSGDEGYDDEDDDEDDDEREKEMLRKLSSMPAHAYTRPWAGSGPGGEDGARETALVVSGEAQGLGVEALRLAEGTGGRRLHVGMAAGVESLNVGVAASVLLFEARRQLTMGRREAAAQGGAGSQARRTRR
SIO_010081: MRM3
subclass of: SO_0000673
so part of: MRM3
location: join(1466860..1467161,1469043..1469287,1469672..1469845,1470500..1470662,1473571..1473991)
location: region:1466860-1473991:1
so has part: feature:1466860-1467161:1:exon
so has part: feature:1469043-1469287:1:exon
so has part: feature:1469672-1469845:1:exon
so has part: feature:1470500-1470662:1:exon
so has part: feature:1473571-1473991:1:exon

XP_032823481.1
type: Protein
SIO_000068: ncbiprotein

position:1466860:1
position: 1466860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1473991:1
position: 1473991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1466860-1467161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1469043-1469287:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469672-1469845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1470500-1470662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1473571-1473991:1:exon

LOC116950120
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1475996..1479666)
location: region:1475996-1479666:-1
so has part: feature:1475996-1479666:-1:exon
subclass of: SO_0000011

116950120
type: Gene
SIO_000068: ncbigene

position:1475996:-1
position: 1475996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1479666:-1
position: 1479666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1475996-1479666:-1:exon

LOC116950120
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116950120
product: uncharacterized LOC116950120
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XR_004403966.1
SIO_010081: LOC116950120
subclass of: SO_0000673
so part of: LOC116950120
location: complement(join(1475996..1477122,1477319..1479666))
location: region:1475996-1479666:-1
so has part: feature:1477319-1479666:-1:exon
so has part: feature:1475996-1477122:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1477319-1479666:-1:exon

position:1477319:-1
position: 1477319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1475996-1477122:-1:exon

position:1477122:-1
position: 1477122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116950118
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950118
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1482003..1555429)
location: region:1482003-1555429:-1
so has part: feature:1482003-1555429:-1:exon
subclass of: SO_0000010

116950118
type: Gene
SIO_000068: ncbigene

position:1482003:-1
position: 1482003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1555429:-1
position: 1555429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1482003-1555429:-1:exon

LOC116950118
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950118
product: protein phosphatase 1E-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_032967588.1
SIO_010081: LOC116950118
subclass of: SO_0000673
so part of: LOC116950118
location: complement(join(1482003..1483742,1486200..1486477,1487396..1487489,1489172..1489315,1491451..1491642,1492711..1492910,1496234..1496355,1514152..1514238,1554647..1555429))
location: region:1482003-1555429:-1
so has part: feature:1554647-1555429:-1:exon
so has part: feature:1514152-1514238:-1:exon
so has part: feature:1496234-1496355:-1:exon
so has part: feature:1492711-1492910:-1:exon
so has part: feature:1491451-1491642:-1:exon
so has part: feature:1489172-1489315:-1:exon
so has part: feature:1487396-1487489:-1:exon
so has part: feature:1486200-1486477:-1:exon
so has part: feature:1482003-1483742:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1554647-1555429:-1:exon

position:1554647:-1
position: 1554647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1514152-1514238:-1:exon

position:1514152:-1
position: 1514152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514238:-1
position: 1514238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1496234-1496355:-1:exon

position:1496234:-1
position: 1496234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1496355:-1
position: 1496355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1492711-1492910:-1:exon

position:1492711:-1
position: 1492711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1492910:-1
position: 1492910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1491451-1491642:-1:exon

position:1491451:-1
position: 1491451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1491642:-1
position: 1491642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1489172-1489315:-1:exon

position:1489172:-1
position: 1489172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1489315:-1
position: 1489315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1487396-1487489:-1:exon

position:1487396:-1
position: 1487396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1487489:-1
position: 1487489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1486200-1486477:-1:exon

position:1486200:-1
position: 1486200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1486477:-1
position: 1486477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1482003-1483742:-1:exon

position:1483742:-1
position: 1483742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116950118
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950118
product: protein phosphatase 1E-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_032967589.1
SIO_010081: LOC116950118
subclass of: SO_0000673
so part of: LOC116950118
location: complement(join(1482003..1483742,1486200..1486477,1487396..1487489,1489172..1489315,1491451..1491642,1492711..1492910,1496234..1496355,1554647..1555428))
location: region:1482003-1555428:-1
so has part: feature:1554647-1555428:-1:exon
so has part: feature:1496234-1496355:-1:exon
so has part: feature:1492711-1492910:-1:exon
so has part: feature:1491451-1491642:-1:exon
so has part: feature:1489172-1489315:-1:exon
so has part: feature:1487396-1487489:-1:exon
so has part: feature:1486200-1486477:-1:exon
so has part: feature:1482003-1483742:-1:exon

position:1555428:-1
position: 1555428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1554647-1555428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1496234-1496355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1492711-1492910:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1491451-1491642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1489172-1489315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1487396-1487489:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1486200-1486477:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1482003-1483742:-1:exon

LOC116950118
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950118
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1E-like isoform X2
translation: MADEQSTRKMLSAMLAELRVPPESPGEDAAPPPLRPPSSSLAESEVEGETLELCLQFFSRYNAPYLLAASLARSTAAEVLASDLSSCLCPAQIKEGTEEPLLYDSVKLARLVFAKLREVCVAWQKEPPALSRQRRSFQISLHAIKNTRRKMEDRHVIFQDLNALFTSEEEEDDQAYFAIFDGHGGVDAAIYAATHLHVSLAREGSFRRDPLEALRRAFCQTDQRFVLKARQENWRCGSTGVVTLIRGNELHVAWLGDSQVILVRKGSPVELMSPHKPDREDEKKRIEALGGCVIWFGAWRVNGTLSVSRAIGDMEHKPYVSCDADCATFPLDGSEDYLLLACDGFYDTVQPDEAARIVGEHLRENDGDPAMLAHRLVASARDAGSSDNITVLVVFLRDARDVMQEDTGGADGERDRAVPPGGGGGGSGEDDGGNGQGGGGEGGGGGGGGGGDSGGGGSNDGNGGAGGGAGGGTHGDSDGRNGEGDCARDPCDGGGGGEARQGNGSEFGPENREDSLTERTFLALRSPVWIGEPQRGMDFPARIGDDANGAGASGRDVRPRARGSGVTGWNSVADGAEGDRPCIAGVPDRFLCGARVVDSHGEMSNVGEGLRVNVTASGEMKPKVGTSGQNDMYASPGGAIASSNTVAADESGIAVGCSNWPLADLVGDTKASMSADEIGELKPLSCSLVAPSATQGHNAADRGGLYQVQAAPGQAEVDNRDTDESSTDMNCEKKGRSLPDTTTTTTRHKCSRAGNGGDVLAPYKPAGAIAKVKARGWDSSLSEDFRLKNGGGGDRRSAGPATHPPSREGDATQSWGRPKPVKESLQLCRRRGAGDRTGDQSTFMAVAC
SIO_010081: LOC116950118
subclass of: SO_0000673
so part of: LOC116950118
location: complement(join(1482408..1483742,1486200..1486477,1487396..1487489,1489172..1489315,1491451..1491642,1492711..1492910,1496234..1496355,1554647..1554828))
location: region:1482408-1554828:-1
so has part: feature:1554647-1554828:-1:exon
so has part: feature:1496234-1496355:-1:exon
so has part: feature:1492711-1492910:-1:exon
so has part: feature:1491451-1491642:-1:exon
so has part: feature:1489172-1489315:-1:exon
so has part: feature:1487396-1487489:-1:exon
so has part: feature:1486200-1486477:-1:exon
so has part: feature:1482408-1483742:-1:exon

XP_032823480.1
type: Protein
SIO_000068: ncbiprotein

position:1482408:-1
position: 1482408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1554828:-1
position: 1554828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1554647-1554828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1496234-1496355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1492711-1492910:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1491451-1491642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1489172-1489315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1487396-1487489:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1486200-1486477:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1482408-1483742:-1:exon

LOC116950118
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950118
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116950118 isoform X1
translation: MADEQSTRKMLSAMLAELRVPPESPGEDAAPPPLRPPSSSLAESEVEGETLELCLQFFSRYFVPLPMSRTRSTRLTVSAHPYCVQPTQCSNAPYLLAASLARSTAAEVLASDLSSCLCPAQIKEGTEEPLLYDSVKLARLVFAKLREVCVAWQKEPPALSRQRRSFQISLHAIKNTRRKMEDRHVIFQDLNALFTSEEEEDDQAYFAIFDGHGGVDAAIYAATHLHVSLAREGSFRRDPLEALRRAFCQTDQRFVLKARQENWRCGSTGVVTLIRGNELHVAWLGDSQVILVRKGSPVELMSPHKPDREDEKKRIEALGGCVIWFGAWRVNGTLSVSRAIGDMEHKPYVSCDADCATFPLDGSEDYLLLACDGFYDTVQPDEAARIVGEHLRENDGDPAMLAHRLVASARDAGSSDNITVLVVFLRDARDVMQEDTGGADGERDRAVPPGGGGGGSGEDDGGNGQGGGGEGGGGGGGGGGDSGGGGSNDGNGGAGGGAGGGTHGDSDGRNGEGDCARDPCDGGGGGEARQGNGSEFGPENREDSLTERTFLALRSPVWIGEPQRGMDFPARIGDDANGAGASGRDVRPRARGSGVTGWNSVADGAEGDRPCIAGVPDRFLCGARVVDSHGEMSNVGEGLRVNVTASGEMKPKVGTSGQNDMYASPGGAIASSNTVAADESGIAVGCSNWPLADLVGDTKASMSADEIGELKPLSCSLVAPSATQGHNAADRGGLYQVQAAPGQAEVDNRDTDESSTDMNCEKKGRSLPDTTTTTTRHKCSRAGNGGDVLAPYKPAGAIAKVKARGWDSSLSEDFRLKNGGGGDRRSAGPATHPPSREGDATQSWGRPKPVKESLQLCRRRGAGDRTGDQSTFMAVAC
SIO_010081: LOC116950118
subclass of: SO_0000673
so part of: LOC116950118
location: complement(join(1482408..1483742,1486200..1486477,1487396..1487489,1489172..1489315,1491451..1491642,1492711..1492910,1496234..1496355,1514152..1514238,1554647..1554828))
location: region:1482408-1554828:-1
so has part: feature:1554647-1554828:-1:exon
so has part: feature:1514152-1514238:-1:exon
so has part: feature:1496234-1496355:-1:exon
so has part: feature:1492711-1492910:-1:exon
so has part: feature:1491451-1491642:-1:exon
so has part: feature:1489172-1489315:-1:exon
so has part: feature:1487396-1487489:-1:exon
so has part: feature:1486200-1486477:-1:exon
so has part: feature:1482408-1483742:-1:exon

XP_032823479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1554647-1554828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1514152-1514238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1496234-1496355:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1492711-1492910:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1491451-1491642:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1489172-1489315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1487396-1487489:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1486200-1486477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1482408-1483742:-1:exon

TRIM37
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRIM37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1563124..1608903)
location: region:1563124-1608903:-1
so has part: feature:1563124-1608903:-1:exon
subclass of: SO_0000010

116950121
type: Gene
SIO_000068: ncbigene

position:1563124:-1
position: 1563124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1608903:-1
position: 1608903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1563124-1608903:-1:exon

TRIM37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TRIM37
product: tripartite motif containing 37, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_032967597.1
SIO_010081: TRIM37
subclass of: SO_0000673
so part of: TRIM37
location: complement(join(1563124..1564199,1567633..1567812,1574149..1574249,1576136..1576355,1577419..1577565,1578607..1578711,1579521..1579700,1582069..1582151,1583552..1583691,1584896..1585186,1587704..1587818,1588513..1588692,1589593..1589669,1590634..1590715,1592275..1592325,1593721..1593845,1594628..1594695,1594873..1594996,1596269..1596391,1599599..1599686,1600447..1600563,1602305..1602345,1603191..1603292,1604935..1605131,1608779..1608903))
location: region:1563124-1608903:-1
so has part: feature:1608779-1608903:-1:exon
so has part: feature:1604935-1605131:-1:exon
so has part: feature:1603191-1603292:-1:exon
so has part: feature:1602305-1602345:-1:exon
so has part: feature:1600447-1600563:-1:exon
so has part: feature:1599599-1599686:-1:exon
so has part: feature:1596269-1596391:-1:exon
so has part: feature:1594873-1594996:-1:exon
so has part: feature:1594628-1594695:-1:exon
so has part: feature:1593721-1593845:-1:exon
so has part: feature:1592275-1592325:-1:exon
so has part: feature:1590634-1590715:-1:exon
so has part: feature:1589593-1589669:-1:exon
so has part: feature:1588513-1588692:-1:exon
so has part: feature:1587704-1587818:-1:exon
so has part: feature:1584896-1585186:-1:exon
so has part: feature:1583552-1583691:-1:exon
so has part: feature:1582069-1582151:-1:exon
so has part: feature:1579521-1579700:-1:exon
so has part: feature:1578607-1578711:-1:exon
so has part: feature:1577419-1577565:-1:exon
so has part: feature:1576136-1576355:-1:exon
so has part: feature:1574149-1574249:-1:exon
so has part: feature:1567633-1567812:-1:exon
so has part: feature:1563124-1564199:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1608779-1608903:-1:exon

position:1608779:-1
position: 1608779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1604935-1605131:-1:exon

position:1604935:-1
position: 1604935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1605131:-1
position: 1605131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1603191-1603292:-1:exon

position:1603191:-1
position: 1603191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1603292:-1
position: 1603292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1602305-1602345:-1:exon

position:1602305:-1
position: 1602305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1602345:-1
position: 1602345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1600447-1600563:-1:exon

position:1600447:-1
position: 1600447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1600563:-1
position: 1600563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1599599-1599686:-1:exon

position:1599599:-1
position: 1599599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1599686:-1
position: 1599686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1596269-1596391:-1:exon

position:1596269:-1
position: 1596269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1596391:-1
position: 1596391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1594873-1594996:-1:exon

position:1594873:-1
position: 1594873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594996:-1
position: 1594996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1594628-1594695:-1:exon

position:1594628:-1
position: 1594628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594695:-1
position: 1594695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1593721-1593845:-1:exon

position:1593721:-1
position: 1593721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1593845:-1
position: 1593845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1592275-1592325:-1:exon

position:1592275:-1
position: 1592275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1592325:-1
position: 1592325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1590634-1590715:-1:exon

position:1590634:-1
position: 1590634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590715:-1
position: 1590715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1589593-1589669:-1:exon

position:1589593:-1
position: 1589593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1589669:-1
position: 1589669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1588513-1588692:-1:exon

position:1588513:-1
position: 1588513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1588692:-1
position: 1588692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1587704-1587818:-1:exon

position:1587704:-1
position: 1587704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1587818:-1
position: 1587818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1584896-1585186:-1:exon

position:1584896:-1
position: 1584896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1585186:-1
position: 1585186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1583552-1583691:-1:exon

position:1583552:-1
position: 1583552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1583691:-1
position: 1583691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1582069-1582151:-1:exon

position:1582069:-1
position: 1582069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582151:-1
position: 1582151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1579521-1579700:-1:exon

position:1579521:-1
position: 1579521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1579700:-1
position: 1579700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1578607-1578711:-1:exon

position:1578607:-1
position: 1578607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1578711:-1
position: 1578711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1577419-1577565:-1:exon

position:1577419:-1
position: 1577419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1577565:-1
position: 1577565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1576136-1576355:-1:exon

position:1576136:-1
position: 1576136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1576355:-1
position: 1576355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1574149-1574249:-1:exon

position:1574149:-1
position: 1574149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574249:-1
position: 1574249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1567633-1567812:-1:exon

position:1567633:-1
position: 1567633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567812:-1
position: 1567812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1563124-1564199:-1:exon

position:1564199:-1
position: 1564199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIM37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TRIM37
product: tripartite motif containing 37, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_032967595.1
SIO_010081: TRIM37
subclass of: SO_0000673
so part of: TRIM37
location: complement(join(1563124..1564199,1567633..1567812,1574149..1574249,1576136..1576355,1577419..1577565,1578607..1578711,1579521..1579703,1582069..1582151,1583552..1583691,1584896..1585186,1587704..1587818,1588513..1588692,1589593..1589669,1590634..1590715,1592275..1592325,1593721..1593845,1594628..1594695,1594873..1594996,1596269..1596391,1599599..1599686,1600447..1600563,1602305..1602345,1603191..1603292,1604935..1605131,1608779..1608903))
location: region:1563124-1608903:-1
so has part: feature:1608779-1608903:-1:exon
so has part: feature:1604935-1605131:-1:exon
so has part: feature:1603191-1603292:-1:exon
so has part: feature:1602305-1602345:-1:exon
so has part: feature:1600447-1600563:-1:exon
so has part: feature:1599599-1599686:-1:exon
so has part: feature:1596269-1596391:-1:exon
so has part: feature:1594873-1594996:-1:exon
so has part: feature:1594628-1594695:-1:exon
so has part: feature:1593721-1593845:-1:exon
so has part: feature:1592275-1592325:-1:exon
so has part: feature:1590634-1590715:-1:exon
so has part: feature:1589593-1589669:-1:exon
so has part: feature:1588513-1588692:-1:exon
so has part: feature:1587704-1587818:-1:exon
so has part: feature:1584896-1585186:-1:exon
so has part: feature:1583552-1583691:-1:exon
so has part: feature:1582069-1582151:-1:exon
so has part: feature:1579521-1579703:-1:exon
so has part: feature:1578607-1578711:-1:exon
so has part: feature:1577419-1577565:-1:exon
so has part: feature:1576136-1576355:-1:exon
so has part: feature:1574149-1574249:-1:exon
so has part: feature:1567633-1567812:-1:exon
so has part: feature:1563124-1564199:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1608779-1608903:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1604935-1605131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1603191-1603292:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1602305-1602345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1600447-1600563:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1599599-1599686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1596269-1596391:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1594873-1594996:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1594628-1594695:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1593721-1593845:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1592275-1592325:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1590634-1590715:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1589593-1589669:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1588513-1588692:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1587704-1587818:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1584896-1585186:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1583552-1583691:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1582069-1582151:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1579521-1579703:-1:exon

position:1579703:-1
position: 1579703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1578607-1578711:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1577419-1577565:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1576136-1576355:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1574149-1574249:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1567633-1567812:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1563124-1564199:-1:exon

TRIM37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TRIM37
product: tripartite motif containing 37, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_032967596.1
SIO_010081: TRIM37
subclass of: SO_0000673
so part of: TRIM37
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TRIM37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TRIM37
product: tripartite motif containing 37, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_032967593.1
SIO_010081: TRIM37
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TRIM37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TRIM37
product: tripartite motif containing 37, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_032967592.1
SIO_010081: TRIM37
subclass of: SO_0000673
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TRIM37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TRIM37
product: tripartite motif containing 37, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_032967598.1
SIO_010081: TRIM37
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TRIM37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
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note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
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urn:…
SIO_000300: 5
SIO_000628: feature:1600447-1600563:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1599599-1599686:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1596269-1596391:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1594873-1594996:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1594628-1594695:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1593721-1593845:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1592275-1592325:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1590634-1590715:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1589593-1589669:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1588513-1588692:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1587704-1587818:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1584896-1585186:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1583552-1583694:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1582069-1582151:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1579521-1579703:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1578607-1578711:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1577419-1577565:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1576136-1576355:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1574149-1574249:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1567633-1567812:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1563124-1564199:-1:exon

TRIM37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TRIM37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM37 isoform X5
translation: MKSVNSIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLHELVNCRWAEEVTQQLDTLHMCGLSKQEDGDKDKCELHREKLSVFCWTCKKCICHQCALWGGMHGGHMFKPLSEIYEQHVSQVNEEVGKLRRRLMELISLVQEVEKNVESVRGAKDDRVREIRNAVEMMIARLDTQLKSKLLTLMGQKNSLTKETELLESLLQEVEHQVRSCSKSELIMKSAEILQMFQQVHRRPMASFVTAPVPPDFTSELVPAYDSSTFVLSNFSILRQRADPVYSPPLQVSGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPSKNIIREFASDFEVGECWGYNRFFRLDLLASEGYLNTHNDSVVLRFQLRPPTFHQKCRDQQWYISQLETAQAAYIQQTNDLKERLTIELSRSQSGRAATLPSSHTSPRGGPSRAKQPRPGRQSSHSCAEAAGALASVAAVGIRSPRDGSCSRDSTLPRDGGGALPVEEEDDDKTQHDDSNQEISDGDLDGECLTGEEENNLLGEGSSSSASTAGSSSTEENDIDTETMSGENDVEYGGAMDLEEGELLDEALGAAAGGTCLAEGARGGRARVAVGLAGAAGSLLELEPSLLLQLLDLGESETLWDFPPHPPELHSSRHQRKDREQQRRQQSLLRNSADVFKRLQAQVAEGRGKLPASRTRGRTTTVTARRPPSLQRALDSRESDSRSMQAERHTAQPHSEGIAACGRRRVSPKSSSPPLPCDQDAGSGHGATPGQELQEESACPAPVPVGGYDLAKALSSVPSLEMVRKGLSVGPGQRVRHSGNRRAESETSTAVPTGEGADDHGEHVMAPTSGMCGGLLELGQPQCLSAPERGVSPDLGGSCLAGSDLDSSLEPEEREAAAELREEGSISEDASEDSFVADLDTK
SIO_010081: TRIM37
subclass of: SO_0000673
so part of: TRIM37
location: complement(join(1564141..1564199,1567633..1567812,1574149..1574249,1576136..1576355,1577419..1577565,1578607..1578711,1579521..1579703,1582069..1582151,1583552..1583694,1584896..1585186,1587704..1587818,1588513..1588692,1589593..1589669,1590634..1590715,1592275..1592325,1593721..1593845,1594628..1594695,1594873..1594996,1596269..1596391,1599599..1599686,1600447..1600563,1602305..1602345,1603191..1603292,1608779..1608793))
location: region:1564141-1608793:-1
so has part: feature:1608779-1608793:-1:exon
so has part: feature:1603191-1603292:-1:exon
so has part: feature:1602305-1602345:-1:exon
so has part: feature:1600447-1600563:-1:exon
so has part: feature:1599599-1599686:-1:exon
so has part: feature:1596269-1596391:-1:exon
so has part: feature:1594873-1594996:-1:exon
so has part: feature:1594628-1594695:-1:exon
so has part: feature:1593721-1593845:-1:exon
so has part: feature:1592275-1592325:-1:exon
so has part: feature:1590634-1590715:-1:exon
so has part: feature:1589593-1589669:-1:exon
so has part: feature:1588513-1588692:-1:exon
so has part: feature:1587704-1587818:-1:exon
so has part: feature:1584896-1585186:-1:exon
so has part: feature:1583552-1583694:-1:exon
so has part: feature:1582069-1582151:-1:exon
so has part: feature:1579521-1579703:-1:exon
so has part: feature:1578607-1578711:-1:exon
so has part: feature:1577419-1577565:-1:exon
so has part: feature:1576136-1576355:-1:exon
so has part: feature:1574149-1574249:-1:exon
so has part: feature:1567633-1567812:-1:exon
so has part: feature:1564141-1564199:-1:exon

XP_032823489.1
type: Protein
SIO_000068: ncbiprotein

position:1564141:-1
position: 1564141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1608793:-1
position: 1608793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1608779-1608793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1603191-1603292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1602305-1602345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1600447-1600563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599599-1599686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1596269-1596391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1594873-1594996:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1594628-1594695:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1593721-1593845:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1592275-1592325:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1590634-1590715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1589593-1589669:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1588513-1588692:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1587704-1587818:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1584896-1585186:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1583552-1583694:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1582069-1582151:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1579521-1579703:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1578607-1578711:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1577419-1577565:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1576136-1576355:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1574149-1574249:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1567633-1567812:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1564141-1564199:-1:exon

TRIM37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TRIM37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM37 isoform X4
translation: MDENSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLHELVNCRWAEEVTQQLDTLHMCGLSKQEDGDKDKCELHREKLSVFCWTCKKCICHQCALWGGMHGGHMFKPLSEIYEQHVSQVNEEVGKLRRRLMELISLVQEVEKNVESVRGAKDDRVREIRNAVEMMIARLDTQLKSKLLTLMGQKNSLTKETELLESLLQEVEHQVRSCSKSELIMKSAEILQMFQQVHRRPMASFVTAPVPPDFTSELVPAYDSSTFVLSNFSILRQRADPVYSPPLQVSGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPSKNIIREFASDFEVGECWGYNRFFRLDLLASEGYLNTHNDSVVLRFQLRPPTFHQKCRDQQWYISQLETAQAAYIQQTNDLKERLTIELSRSQSGRAATLPSSHTSPRGGPSRAKQPRPGRQSSHSCAEAAGALASVAAVGIRSPRDGSCSRDSTLPRDGGGALPVEEEDDDKTQHDDSNEISDGDLDGECLTGEEENNLLGEGSSSSASTAGSSSTEENDIDTETMSGENDVEYGGAMDLEEGELLDEALGAAGGTCLAEGARGGRARVAVGLAGAAGSLLELEPSLLLQLLDLGESETLWDFPPHPPELHSSRHQRKDREQQRRQQSLLRNSADVFKRLQAQVAEGRGKLPASRTRGRTTTVTARRPPSLQRALDSRESDSRSMQAERHTAQPHSEGIAACGRRRVSPKSSSPPLPCDQDAGSGHGATPGQELQEESACPAPVPVGGYDLAKALSSVPSLEMVRKGLSVGPGQRVRHSGNRRAESETSTAVPTGEGADDHGEHVMAPTSGMCGGLLELGQPQCLSAPERGVSPDLGGSCLAGSDLDSSLEPEEREAAAELREEGSISEDASEDSFVADLDTK
SIO_010081: TRIM37
subclass of: SO_0000673
so part of: TRIM37
location: complement(join(1564141..1564199,1567633..1567812,1574149..1574249,1576136..1576355,1577419..1577565,1578607..1578711,1579521..1579700,1582069..1582151,1583552..1583691,1584896..1585186,1587704..1587818,1588513..1588692,1589593..1589669,1590634..1590715,1592275..1592325,1593721..1593845,1594628..1594695,1594873..1594996,1596269..1596391,1599599..1599686,1600447..1600563,1602305..1602345,1603191..1603292,1604935..1604955))
location: region:1564141-1604955:-1
so has part: feature:1604935-1604955:-1:exon
so has part: feature:1603191-1603292:-1:exon
so has part: feature:1602305-1602345:-1:exon
so has part: feature:1600447-1600563:-1:exon
so has part: feature:1599599-1599686:-1:exon
so has part: feature:1596269-1596391:-1:exon
so has part: feature:1594873-1594996:-1:exon
so has part: feature:1594628-1594695:-1:exon
so has part: feature:1593721-1593845:-1:exon
so has part: feature:1592275-1592325:-1:exon
so has part: feature:1590634-1590715:-1:exon
so has part: feature:1589593-1589669:-1:exon
so has part: feature:1588513-1588692:-1:exon
so has part: feature:1587704-1587818:-1:exon
so has part: feature:1584896-1585186:-1:exon
so has part: feature:1583552-1583691:-1:exon
so has part: feature:1582069-1582151:-1:exon
so has part: feature:1579521-1579700:-1:exon
so has part: feature:1578607-1578711:-1:exon
so has part: feature:1577419-1577565:-1:exon
so has part: feature:1576136-1576355:-1:exon
so has part: feature:1574149-1574249:-1:exon
so has part: feature:1567633-1567812:-1:exon
so has part: feature:1564141-1564199:-1:exon

XP_032823488.1
type: Protein
SIO_000068: ncbiprotein

position:1604955:-1
position: 1604955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1604935-1604955:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1603191-1603292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1602305-1602345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1600447-1600563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599599-1599686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1596269-1596391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1594873-1594996:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1594628-1594695:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1593721-1593845:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1592275-1592325:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1590634-1590715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1589593-1589669:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1588513-1588692:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1587704-1587818:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1584896-1585186:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1583552-1583691:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1582069-1582151:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1579521-1579700:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1578607-1578711:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1577419-1577565:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1576136-1576355:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1574149-1574249:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1567633-1567812:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1564141-1564199:-1:exon

TRIM37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TRIM37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM37 isoform X2
translation: MDENSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLHELVNCRWAEEVTQQLDTLHMCGLSKQEDGDKDKCELHREKLSVFCWTCKKCICHQCALWGGMHGGHMFKPLSEIYEQHVSQVNEEVGKLRRRLMELISLVQEVEKNVESVRGAKDDRVREIRNAVEMMIARLDTQLKSKLLTLMGQKNSLTKETELLESLLQEVEHQVRSCSKSELIMKSAEILQMFQQVHRRPMASFVTAPVPPDFTSELVPAYDSSTFVLSNFSILRQRADPVYSPPLQVSGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPSKNIIREFASDFEVGECWGYNRFFRLDLLASEGYLNTHNDSVVLRFQLRPPTFHQKCRDQQWYISQLETAQAAYIQQTNDLKERLTIELSRSQSGRAATLPSSHTSPRGGPSRAKQPRPGRQSSHSCAEAAGALASVAAVGIRSPRDGSCSRDSTLPRDGGGALPVEEEDDDKTQHDDSNEISDGDLDGECLTGEEENNLLGEGSSSSASTAGSSSTEENDIDTETMSGENDVEYGGAMDLEEGELLDEALGAAAGGTCLAEGARGGRARVAVGLAGAAGSLLELEPSLLLQLLDLGESETLWDFPPHPPELHSSRHQRKDREQQRRQQSLLRNSADVFKRLQAQVAEGRGKLPASRTRGRTTTVTARRPPSLQRALDSRESDSRSMQAERHTAQPHSEGIAACGRRRVSPKSSSPPLPCDQDAGSGHGATPGQELQEESACPAPVPVGGYDLAKALSSVPSLEMVRKGLSVGPGQRVRHSGNRRAESETSTAVPTGEGADDHGEHVMAPTSGMCGGLLELGQPQCLSAPERGVSPDLGGSCLAGSDLDSSLEPEEREAAAELREEGSISEDASEDSFVADLDTK
SIO_010081: TRIM37
subclass of: SO_0000673
so part of: TRIM37
location: complement(join(1564141..1564199,1567633..1567812,1574149..1574249,1576136..1576355,1577419..1577565,1578607..1578711,1579521..1579703,1582069..1582151,1583552..1583691,1584896..1585186,1587704..1587818,1588513..1588692,1589593..1589669,1590634..1590715,1592275..1592325,1593721..1593845,1594628..1594695,1594873..1594996,1596269..1596391,1599599..1599686,1600447..1600563,1602305..1602345,1603191..1603292,1604935..1604955))
location: region:1564141-1604955:-1
so has part: feature:1604935-1604955:-1:exon
so has part: feature:1603191-1603292:-1:exon
so has part: feature:1602305-1602345:-1:exon
so has part: feature:1600447-1600563:-1:exon
so has part: feature:1599599-1599686:-1:exon
so has part: feature:1596269-1596391:-1:exon
so has part: feature:1594873-1594996:-1:exon
so has part: feature:1594628-1594695:-1:exon
so has part: feature:1593721-1593845:-1:exon
so has part: feature:1592275-1592325:-1:exon
so has part: feature:1590634-1590715:-1:exon
so has part: feature:1589593-1589669:-1:exon
so has part: feature:1588513-1588692:-1:exon
so has part: feature:1587704-1587818:-1:exon
so has part: feature:1584896-1585186:-1:exon
so has part: feature:1583552-1583691:-1:exon
so has part: feature:1582069-1582151:-1:exon
so has part: feature:1579521-1579703:-1:exon
so has part: feature:1578607-1578711:-1:exon
so has part: feature:1577419-1577565:-1:exon
so has part: feature:1576136-1576355:-1:exon
so has part: feature:1574149-1574249:-1:exon
so has part: feature:1567633-1567812:-1:exon
so has part: feature:1564141-1564199:-1:exon

XP_032823486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1604935-1604955:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1603191-1603292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1602305-1602345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1600447-1600563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599599-1599686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1596269-1596391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1594873-1594996:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1594628-1594695:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1593721-1593845:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1592275-1592325:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1590634-1590715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1589593-1589669:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1588513-1588692:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1587704-1587818:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1584896-1585186:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1583552-1583691:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1582069-1582151:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1579521-1579703:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1578607-1578711:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1577419-1577565:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1576136-1576355:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1574149-1574249:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1567633-1567812:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1564141-1564199:-1:exon

TRIM37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TRIM37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM37 isoform X3
translation: MDENSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLHELVNCRWAEEVTQQLDTLHMCGLSKQEDGDKDKCELHREKLSVFCWTCKKCICHQCALWGGMHGGHMFKPLSEIYEQHVSQVNEEVGKLRRRLMELISLVQEVEKNVESVRGAKDDRVREIRNAVEMMIARLDTQLKSKLLTLMGQKNSLTKETELLESLLQEVEHQVRSCSKSELIMKSAEILQMFQQVHRRPMASFVTAPVPPDFTSELVPAYDSSTFVLSNFSILRQRADPVYSPPLQVSGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPSKNIIREFASDFEVGECWGYNRFFRLDLLASEGYLNTHNDSVVLRFQLRPPTFHQKCRDQQWYISQLETAQAAYIQQTNDLKERLTIELSRSQSGRAATLPSSHTSPRGGPSRAKQPRPGRQSSHSCAEAAGALASVAAVGIRSPRDGSCSRDSTLPRDGGGALPVEEEDDDKTQHDDSNQEISDGDLDGECLTGEEENNLLGEGSSSSASTAGSSSTEENDIDTETMSGENDVEYGGAMDLEEGELLDEALGAAGGTCLAEGARGGRARVAVGLAGAAGSLLELEPSLLLQLLDLGESETLWDFPPHPPELHSSRHQRKDREQQRRQQSLLRNSADVFKRLQAQVAEGRGKLPASRTRGRTTTVTARRPPSLQRALDSRESDSRSMQAERHTAQPHSEGIAACGRRRVSPKSSSPPLPCDQDAGSGHGATPGQELQEESACPAPVPVGGYDLAKALSSVPSLEMVRKGLSVGPGQRVRHSGNRRAESETSTAVPTGEGADDHGEHVMAPTSGMCGGLLELGQPQCLSAPERGVSPDLGGSCLAGSDLDSSLEPEEREAAAELREEGSISEDASEDSFVADLDTK
SIO_010081: TRIM37
subclass of: SO_0000673
so part of: TRIM37
location: complement(join(1564141..1564199,1567633..1567812,1574149..1574249,1576136..1576355,1577419..1577565,1578607..1578711,1579521..1579700,1582069..1582151,1583552..1583694,1584896..1585186,1587704..1587818,1588513..1588692,1589593..1589669,1590634..1590715,1592275..1592325,1593721..1593845,1594628..1594695,1594873..1594996,1596269..1596391,1599599..1599686,1600447..1600563,1602305..1602345,1603191..1603292,1604935..1604955))
location: region:1564141-1604955:-1
so has part: feature:1604935-1604955:-1:exon
so has part: feature:1603191-1603292:-1:exon
so has part: feature:1602305-1602345:-1:exon
so has part: feature:1600447-1600563:-1:exon
so has part: feature:1599599-1599686:-1:exon
so has part: feature:1596269-1596391:-1:exon
so has part: feature:1594873-1594996:-1:exon
so has part: feature:1594628-1594695:-1:exon
so has part: feature:1593721-1593845:-1:exon
so has part: feature:1592275-1592325:-1:exon
so has part: feature:1590634-1590715:-1:exon
so has part: feature:1589593-1589669:-1:exon
so has part: feature:1588513-1588692:-1:exon
so has part: feature:1587704-1587818:-1:exon
so has part: feature:1584896-1585186:-1:exon
so has part: feature:1583552-1583694:-1:exon
so has part: feature:1582069-1582151:-1:exon
so has part: feature:1579521-1579700:-1:exon
so has part: feature:1578607-1578711:-1:exon
so has part: feature:1577419-1577565:-1:exon
so has part: feature:1576136-1576355:-1:exon
so has part: feature:1574149-1574249:-1:exon
so has part: feature:1567633-1567812:-1:exon
so has part: feature:1564141-1564199:-1:exon

XP_032823487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1604935-1604955:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1603191-1603292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1602305-1602345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1600447-1600563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599599-1599686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1596269-1596391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1594873-1594996:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1594628-1594695:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1593721-1593845:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1592275-1592325:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1590634-1590715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1589593-1589669:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1588513-1588692:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1587704-1587818:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1584896-1585186:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1583552-1583694:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1582069-1582151:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1579521-1579700:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1578607-1578711:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1577419-1577565:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1576136-1576355:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1574149-1574249:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1567633-1567812:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1564141-1564199:-1:exon

TRIM37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TRIM37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM37 isoform X1
translation: MDENSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLHELVNCRWAEEVTQQLDTLHMCGLSKQEDGDKDKCELHREKLSVFCWTCKKCICHQCALWGGMHGGHMFKPLSEIYEQHVSQVNEEVGKLRRRLMELISLVQEVEKNVESVRGAKDDRVREIRNAVEMMIARLDTQLKSKLLTLMGQKNSLTKETELLESLLQEVEHQVRSCSKSELIMKSAEILQMFQQVHRRPMASFVTAPVPPDFTSELVPAYDSSTFVLSNFSILRQRADPVYSPPLQVSGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPSKNIIREFASDFEVGECWGYNRFFRLDLLASEGYLNTHNDSVVLRFQLRPPTFHQKCRDQQWYISQLETAQAAYIQQTNDLKERLTIELSRSQSGRAATLPSSHTSPRGGPSRAKQPRPGRQSSHSCAEAAGALASVAAVGIRSPRDGSCSRDSTLPRDGGGALPVEEEDDDKTQHDDSNQEISDGDLDGECLTGEEENNLLGEGSSSSASTAGSSSTEENDIDTETMSGENDVEYGGAMDLEEGELLDEALGAAAGGTCLAEGARGGRARVAVGLAGAAGSLLELEPSLLLQLLDLGESETLWDFPPHPPELHSSRHQRKDREQQRRQQSLLRNSADVFKRLQAQVAEGRGKLPASRTRGRTTTVTARRPPSLQRALDSRESDSRSMQAERHTAQPHSEGIAACGRRRVSPKSSSPPLPCDQDAGSGHGATPGQELQEESACPAPVPVGGYDLAKALSSVPSLEMVRKGLSVGPGQRVRHSGNRRAESETSTAVPTGEGADDHGEHVMAPTSGMCGGLLELGQPQCLSAPERGVSPDLGGSCLAGSDLDSSLEPEEREAAAELREEGSISEDASEDSFVADLDTK
SIO_010081: TRIM37
subclass of: SO_0000673
so part of: TRIM37
location: complement(join(1564141..1564199,1567633..1567812,1574149..1574249,1576136..1576355,1577419..1577565,1578607..1578711,1579521..1579703,1582069..1582151,1583552..1583694,1584896..1585186,1587704..1587818,1588513..1588692,1589593..1589669,1590634..1590715,1592275..1592325,1593721..1593845,1594628..1594695,1594873..1594996,1596269..1596391,1599599..1599686,1600447..1600563,1602305..1602345,1603191..1603292,1604935..1604955))
location: region:1564141-1604955:-1
so has part: feature:1604935-1604955:-1:exon
so has part: feature:1603191-1603292:-1:exon
so has part: feature:1602305-1602345:-1:exon
so has part: feature:1600447-1600563:-1:exon
so has part: feature:1599599-1599686:-1:exon
so has part: feature:1596269-1596391:-1:exon
so has part: feature:1594873-1594996:-1:exon
so has part: feature:1594628-1594695:-1:exon
so has part: feature:1593721-1593845:-1:exon
so has part: feature:1592275-1592325:-1:exon
so has part: feature:1590634-1590715:-1:exon
so has part: feature:1589593-1589669:-1:exon
so has part: feature:1588513-1588692:-1:exon
so has part: feature:1587704-1587818:-1:exon
so has part: feature:1584896-1585186:-1:exon
so has part: feature:1583552-1583694:-1:exon
so has part: feature:1582069-1582151:-1:exon
so has part: feature:1579521-1579703:-1:exon
so has part: feature:1578607-1578711:-1:exon
so has part: feature:1577419-1577565:-1:exon
so has part: feature:1576136-1576355:-1:exon
so has part: feature:1574149-1574249:-1:exon
so has part: feature:1567633-1567812:-1:exon
so has part: feature:1564141-1564199:-1:exon

XP_032823483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1604935-1604955:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1603191-1603292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1602305-1602345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1600447-1600563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599599-1599686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1596269-1596391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1594873-1594996:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1594628-1594695:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1593721-1593845:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1592275-1592325:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1590634-1590715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1589593-1589669:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1588513-1588692:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1587704-1587818:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1584896-1585186:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1583552-1583694:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1582069-1582151:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1579521-1579703:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1578607-1578711:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1577419-1577565:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1576136-1576355:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1574149-1574249:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1567633-1567812:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1564141-1564199:-1:exon

TRIM37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TRIM37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM37 isoform X1
translation: MDENSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLHELVNCRWAEEVTQQLDTLHMCGLSKQEDGDKDKCELHREKLSVFCWTCKKCICHQCALWGGMHGGHMFKPLSEIYEQHVSQVNEEVGKLRRRLMELISLVQEVEKNVESVRGAKDDRVREIRNAVEMMIARLDTQLKSKLLTLMGQKNSLTKETELLESLLQEVEHQVRSCSKSELIMKSAEILQMFQQVHRRPMASFVTAPVPPDFTSELVPAYDSSTFVLSNFSILRQRADPVYSPPLQVSGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPSKNIIREFASDFEVGECWGYNRFFRLDLLASEGYLNTHNDSVVLRFQLRPPTFHQKCRDQQWYISQLETAQAAYIQQTNDLKERLTIELSRSQSGRAATLPSSHTSPRGGPSRAKQPRPGRQSSHSCAEAAGALASVAAVGIRSPRDGSCSRDSTLPRDGGGALPVEEEDDDKTQHDDSNQEISDGDLDGECLTGEEENNLLGEGSSSSASTAGSSSTEENDIDTETMSGENDVEYGGAMDLEEGELLDEALGAAAGGTCLAEGARGGRARVAVGLAGAAGSLLELEPSLLLQLLDLGESETLWDFPPHPPELHSSRHQRKDREQQRRQQSLLRNSADVFKRLQAQVAEGRGKLPASRTRGRTTTVTARRPPSLQRALDSRESDSRSMQAERHTAQPHSEGIAACGRRRVSPKSSSPPLPCDQDAGSGHGATPGQELQEESACPAPVPVGGYDLAKALSSVPSLEMVRKGLSVGPGQRVRHSGNRRAESETSTAVPTGEGADDHGEHVMAPTSGMCGGLLELGQPQCLSAPERGVSPDLGGSCLAGSDLDSSLEPEEREAAAELREEGSISEDASEDSFVADLDTK
SIO_010081: TRIM37
subclass of: SO_0000673
so part of: TRIM37
location: complement(join(1564141..1564199,1567633..1567812,1574149..1574249,1576136..1576355,1577419..1577565,1578607..1578711,1579521..1579703,1582069..1582151,1583552..1583694,1584896..1585186,1587704..1587818,1588513..1588692,1589593..1589669,1590634..1590715,1592275..1592325,1593721..1593845,1594628..1594695,1594873..1594996,1596269..1596391,1599599..1599686,1600447..1600563,1602305..1602345,1603191..1603292,1604935..1604955))
location: region:1564141-1604955:-1
so has part: feature:1604935-1604955:-1:exon
so has part: feature:1603191-1603292:-1:exon
so has part: feature:1602305-1602345:-1:exon
so has part: feature:1600447-1600563:-1:exon
so has part: feature:1599599-1599686:-1:exon
so has part: feature:1596269-1596391:-1:exon
so has part: feature:1594873-1594996:-1:exon
so has part: feature:1594628-1594695:-1:exon
so has part: feature:1593721-1593845:-1:exon
so has part: feature:1592275-1592325:-1:exon
so has part: feature:1590634-1590715:-1:exon
so has part: feature:1589593-1589669:-1:exon
so has part: feature:1588513-1588692:-1:exon
so has part: feature:1587704-1587818:-1:exon
so has part: feature:1584896-1585186:-1:exon
so has part: feature:1583552-1583694:-1:exon
so has part: feature:1582069-1582151:-1:exon
so has part: feature:1579521-1579703:-1:exon
so has part: feature:1578607-1578711:-1:exon
so has part: feature:1577419-1577565:-1:exon
so has part: feature:1576136-1576355:-1:exon
so has part: feature:1574149-1574249:-1:exon
so has part: feature:1567633-1567812:-1:exon
so has part: feature:1564141-1564199:-1:exon

XP_032823484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1604935-1604955:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1603191-1603292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1602305-1602345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1600447-1600563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599599-1599686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1596269-1596391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1594873-1594996:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1594628-1594695:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1593721-1593845:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1592275-1592325:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1590634-1590715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1589593-1589669:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1588513-1588692:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1587704-1587818:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1584896-1585186:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1583552-1583694:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1582069-1582151:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1579521-1579703:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1578607-1578711:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1577419-1577565:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1576136-1576355:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1574149-1574249:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1567633-1567812:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1564141-1564199:-1:exon

TRIM37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TRIM37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM37 isoform X1
translation: MDENSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLHELVNCRWAEEVTQQLDTLHMCGLSKQEDGDKDKCELHREKLSVFCWTCKKCICHQCALWGGMHGGHMFKPLSEIYEQHVSQVNEEVGKLRRRLMELISLVQEVEKNVESVRGAKDDRVREIRNAVEMMIARLDTQLKSKLLTLMGQKNSLTKETELLESLLQEVEHQVRSCSKSELIMKSAEILQMFQQVHRRPMASFVTAPVPPDFTSELVPAYDSSTFVLSNFSILRQRADPVYSPPLQVSGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPSKNIIREFASDFEVGECWGYNRFFRLDLLASEGYLNTHNDSVVLRFQLRPPTFHQKCRDQQWYISQLETAQAAYIQQTNDLKERLTIELSRSQSGRAATLPSSHTSPRGGPSRAKQPRPGRQSSHSCAEAAGALASVAAVGIRSPRDGSCSRDSTLPRDGGGALPVEEEDDDKTQHDDSNQEISDGDLDGECLTGEEENNLLGEGSSSSASTAGSSSTEENDIDTETMSGENDVEYGGAMDLEEGELLDEALGAAAGGTCLAEGARGGRARVAVGLAGAAGSLLELEPSLLLQLLDLGESETLWDFPPHPPELHSSRHQRKDREQQRRQQSLLRNSADVFKRLQAQVAEGRGKLPASRTRGRTTTVTARRPPSLQRALDSRESDSRSMQAERHTAQPHSEGIAACGRRRVSPKSSSPPLPCDQDAGSGHGATPGQELQEESACPAPVPVGGYDLAKALSSVPSLEMVRKGLSVGPGQRVRHSGNRRAESETSTAVPTGEGADDHGEHVMAPTSGMCGGLLELGQPQCLSAPERGVSPDLGGSCLAGSDLDSSLEPEEREAAAELREEGSISEDASEDSFVADLDTK
SIO_010081: TRIM37
subclass of: SO_0000673
so part of: TRIM37
location: complement(join(1564141..1564199,1567633..1567812,1574149..1574249,1576136..1576355,1577419..1577565,1578607..1578711,1579521..1579703,1582069..1582151,1583552..1583694,1584896..1585186,1587704..1587818,1588513..1588692,1589593..1589669,1590634..1590715,1592275..1592325,1593721..1593845,1594628..1594695,1594873..1594996,1596269..1596391,1599599..1599686,1600447..1600563,1602305..1602345,1603191..1603292,1604935..1604955))
location: region:1564141-1604955:-1
so has part: feature:1604935-1604955:-1:exon
so has part: feature:1603191-1603292:-1:exon
so has part: feature:1602305-1602345:-1:exon
so has part: feature:1600447-1600563:-1:exon
so has part: feature:1599599-1599686:-1:exon
so has part: feature:1596269-1596391:-1:exon
so has part: feature:1594873-1594996:-1:exon
so has part: feature:1594628-1594695:-1:exon
so has part: feature:1593721-1593845:-1:exon
so has part: feature:1592275-1592325:-1:exon
so has part: feature:1590634-1590715:-1:exon
so has part: feature:1589593-1589669:-1:exon
so has part: feature:1588513-1588692:-1:exon
so has part: feature:1587704-1587818:-1:exon
so has part: feature:1584896-1585186:-1:exon
so has part: feature:1583552-1583694:-1:exon
so has part: feature:1582069-1582151:-1:exon
so has part: feature:1579521-1579703:-1:exon
so has part: feature:1578607-1578711:-1:exon
so has part: feature:1577419-1577565:-1:exon
so has part: feature:1576136-1576355:-1:exon
so has part: feature:1574149-1574249:-1:exon
so has part: feature:1567633-1567812:-1:exon
so has part: feature:1564141-1564199:-1:exon

XP_032823485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1604935-1604955:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1603191-1603292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1602305-1602345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1600447-1600563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599599-1599686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1596269-1596391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1594873-1594996:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1594628-1594695:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1593721-1593845:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1592275-1592325:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1590634-1590715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1589593-1589669:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1588513-1588692:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1587704-1587818:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1584896-1585186:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1583552-1583694:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1582069-1582151:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1579521-1579703:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1578607-1578711:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1577419-1577565:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1576136-1576355:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1574149-1574249:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1567633-1567812:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1564141-1564199:-1:exon

GLOD4
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: GLOD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1611699..1622803
location: region:1611699-1622803:1
so has part: feature:1611699-1622803:1:exon
subclass of: SO_0000010

116950122
type: Gene
SIO_000068: ncbigene

position:1611699:1
position: 1611699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1622803:1
position: 1622803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1611699-1622803:1:exon

GLOD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: GLOD4
product: glyoxalase domain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_032967599.1
SIO_010081: GLOD4
subclass of: SO_0000673
so part of: GLOD4
location: join(1611699..1611877,1614559..1614608,1615474..1615594,1617570..1617714,1618128..1618258,1619139..1619225,1620755..1620868,1621364..1621450,1621657..1622803)
location: region:1611699-1622803:1
so has part: feature:1611699-1611877:1:exon
so has part: feature:1614559-1614608:1:exon
so has part: feature:1615474-1615594:1:exon
so has part: feature:1617570-1617714:1:exon
so has part: feature:1618128-1618258:1:exon
so has part: feature:1619139-1619225:1:exon
so has part: feature:1620755-1620868:1:exon
so has part: feature:1621364-1621450:1:exon
so has part: feature:1621657-1622803:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1611699-1611877:1:exon

position:1611877:1
position: 1611877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1614559-1614608:1:exon

position:1614559:1
position: 1614559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1614608:1
position: 1614608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1615474-1615594:1:exon

position:1615474:1
position: 1615474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1615594:1
position: 1615594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1617570-1617714:1:exon

position:1617570:1
position: 1617570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1617714:1
position: 1617714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1618128-1618258:1:exon

position:1618128:1
position: 1618128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1618258:1
position: 1618258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1619139-1619225:1:exon

position:1619139:1
position: 1619139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1619225:1
position: 1619225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1620755-1620868:1:exon

position:1620755:1
position: 1620755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1620868:1
position: 1620868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1621364-1621450:1:exon

position:1621364:1
position: 1621364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1621450:1
position: 1621450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1621657-1622803:1:exon

position:1621657:1
position: 1621657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GLOD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: GLOD4
product: glyoxalase domain containing 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032967601.1
SIO_010081: GLOD4
subclass of: SO_0000673
so part of: GLOD4
location: join(1611707..1611714,1611772..1611877,1614559..1614608,1615474..1615594,1617570..1617714,1618128..1618258,1619139..1619225,1620755..1620868,1621364..1621450,1621657..1622803)
location: region:1611707-1622803:1
so has part: feature:1611707-1611714:1:exon
so has part: feature:1611772-1611877:1:exon
so has part: feature:1614559-1614608:1:exon
so has part: feature:1615474-1615594:1:exon
so has part: feature:1617570-1617714:1:exon
so has part: feature:1618128-1618258:1:exon
so has part: feature:1619139-1619225:1:exon
so has part: feature:1620755-1620868:1:exon
so has part: feature:1621364-1621450:1:exon
so has part: feature:1621657-1622803:1:exon

position:1611707:1
position: 1611707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1611707-1611714:1:exon

position:1611714:1
position: 1611714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1611772-1611877:1:exon

position:1611772:1
position: 1611772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1614559-1614608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1615474-1615594:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1617570-1617714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1618128-1618258:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1619139-1619225:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1620755-1620868:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1621364-1621450:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1621657-1622803:1:exon

GLOD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: GLOD4
product: glyoxalase domain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032967600.1
SIO_010081: GLOD4
subclass of: SO_0000673
so part of: GLOD4
location: join(1611719..1611724,1611772..1611877,1614559..1614608,1615474..1615594,1617570..1617714,1618128..1618258,1619139..1619225,1620755..1620868,1621364..1621450,1621657..1622803)
location: region:1611719-1622803:1
so has part: feature:1611719-1611724:1:exon
so has part: feature:1611772-1611877:1:exon
so has part: feature:1614559-1614608:1:exon
so has part: feature:1615474-1615594:1:exon
so has part: feature:1617570-1617714:1:exon
so has part: feature:1618128-1618258:1:exon
so has part: feature:1619139-1619225:1:exon
so has part: feature:1620755-1620868:1:exon
so has part: feature:1621364-1621450:1:exon
so has part: feature:1621657-1622803:1:exon

position:1611719:1
position: 1611719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1611719-1611724:1:exon

position:1611724:1
position: 1611724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1611772-1611877:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1614559-1614608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1615474-1615594:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1617570-1617714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1618128-1618258:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1619139-1619225:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1620755-1620868:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1621364-1621450:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1621657-1622803:1:exon

GLOD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: GLOD4
product: glyoxalase domain containing 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_032967603.1
SIO_010081: GLOD4
subclass of: SO_0000673
so part of: GLOD4
location: join(1611756..1611877,1615474..1615594,1617570..1617714,1618128..1618258,1619139..1619225,1620755..1620868,1621364..1621450,1621657..1622803)
location: region:1611756-1622803:1
so has part: feature:1611756-1611877:1:exon
so has part: feature:1615474-1615594:1:exon
so has part: feature:1617570-1617714:1:exon
so has part: feature:1618128-1618258:1:exon
so has part: feature:1619139-1619225:1:exon
so has part: feature:1620755-1620868:1:exon
so has part: feature:1621364-1621450:1:exon
so has part: feature:1621657-1622803:1:exon

position:1611756:1
position: 1611756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1611756-1611877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1615474-1615594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1617570-1617714:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1618128-1618258:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1619139-1619225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1620755-1620868:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1621364-1621450:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1621657-1622803:1:exon

GLOD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: GLOD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glyoxalase domain-containing protein 4 isoform X1
translation: MALRRALHFVFKVGDRAATLSFYRQVLGMQVLRHEEFKEGCKATCNGPYDGTWSKTMIGYGPEDDHFVVELTYNYGIGTYRLGNDFLGMTIQSSKAVKNARQRGWPMKECDDGTFETEAPGGYKFFLIDQDEPNTDPVQKVSLGVSDLQRSLHYWEALCGMKLYKKEEGKALLGFADSQCKLELQAIGGPVDHATAFGRVAFSCPREQLPDIQSLMQGENQKVITPLVSLDTPGKATVEVVIVADPDDHEICFVGDEAFRELSKPDPSGDSLLNQAIAEDKSGEWYAKHKRQKPTA
SIO_010081: GLOD4
subclass of: SO_0000673
so part of: GLOD4
location: join(1611788..1611877,1614559..1614608,1615474..1615594,1617570..1617714,1618128..1618258,1619139..1619225,1620755..1620868,1621364..1621450,1621657..1621722)
location: region:1611788-1621722:1
so has part: feature:1611788-1611877:1:exon
so has part: feature:1614559-1614608:1:exon
so has part: feature:1615474-1615594:1:exon
so has part: feature:1617570-1617714:1:exon
so has part: feature:1618128-1618258:1:exon
so has part: feature:1619139-1619225:1:exon
so has part: feature:1620755-1620868:1:exon
so has part: feature:1621364-1621450:1:exon
so has part: feature:1621657-1621722:1:exon

XP_032823490.1
type: Protein
SIO_000068: ncbiprotein

position:1611788:1
position: 1611788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1621722:1
position: 1621722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1611788-1611877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1614559-1614608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1615474-1615594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1617570-1617714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1618128-1618258:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1619139-1619225:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1620755-1620868:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1621364-1621450:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1621657-1621722:1:exon

GLOD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: GLOD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glyoxalase domain-containing protein 4 isoform X1
translation: MALRRALHFVFKVGDRAATLSFYRQVLGMQVLRHEEFKEGCKATCNGPYDGTWSKTMIGYGPEDDHFVVELTYNYGIGTYRLGNDFLGMTIQSSKAVKNARQRGWPMKECDDGTFETEAPGGYKFFLIDQDEPNTDPVQKVSLGVSDLQRSLHYWEALCGMKLYKKEEGKALLGFADSQCKLELQAIGGPVDHATAFGRVAFSCPREQLPDIQSLMQGENQKVITPLVSLDTPGKATVEVVIVADPDDHEICFVGDEAFRELSKPDPSGDSLLNQAIAEDKSGEWYAKHKRQKPTA
SIO_010081: GLOD4
subclass of: SO_0000673
so part of: GLOD4
location: join(1611788..1611877,1614559..1614608,1615474..1615594,1617570..1617714,1618128..1618258,1619139..1619225,1620755..1620868,1621364..1621450,1621657..1621722)
location: region:1611788-1621722:1
so has part: feature:1611788-1611877:1:exon
so has part: feature:1614559-1614608:1:exon
so has part: feature:1615474-1615594:1:exon
so has part: feature:1617570-1617714:1:exon
so has part: feature:1618128-1618258:1:exon
so has part: feature:1619139-1619225:1:exon
so has part: feature:1620755-1620868:1:exon
so has part: feature:1621364-1621450:1:exon
so has part: feature:1621657-1621722:1:exon

XP_032823491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1611788-1611877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1614559-1614608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1615474-1615594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1617570-1617714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1618128-1618258:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1619139-1619225:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1620755-1620868:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1621364-1621450:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1621657-1621722:1:exon

GLOD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: GLOD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glyoxalase domain-containing protein 4 isoform X1
translation: MALRRALHFVFKVGDRAATLSFYRQVLGMQVLRHEEFKEGCKATCNGPYDGTWSKTMIGYGPEDDHFVVELTYNYGIGTYRLGNDFLGMTIQSSKAVKNARQRGWPMKECDDGTFETEAPGGYKFFLIDQDEPNTDPVQKVSLGVSDLQRSLHYWEALCGMKLYKKEEGKALLGFADSQCKLELQAIGGPVDHATAFGRVAFSCPREQLPDIQSLMQGENQKVITPLVSLDTPGKATVEVVIVADPDDHEICFVGDEAFRELSKPDPSGDSLLNQAIAEDKSGEWYAKHKRQKPTA
SIO_010081: GLOD4
subclass of: SO_0000673
so part of: GLOD4
location: join(1611788..1611877,1614559..1614608,1615474..1615594,1617570..1617714,1618128..1618258,1619139..1619225,1620755..1620868,1621364..1621450,1621657..1621722)
location: region:1611788-1621722:1
so has part: feature:1611788-1611877:1:exon
so has part: feature:1614559-1614608:1:exon
so has part: feature:1615474-1615594:1:exon
so has part: feature:1617570-1617714:1:exon
so has part: feature:1618128-1618258:1:exon
so has part: feature:1619139-1619225:1:exon
so has part: feature:1620755-1620868:1:exon
so has part: feature:1621364-1621450:1:exon
so has part: feature:1621657-1621722:1:exon

XP_032823492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1611788-1611877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1614559-1614608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1615474-1615594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1617570-1617714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1618128-1618258:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1619139-1619225:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1620755-1620868:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1621364-1621450:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1621657-1621722:1:exon

GLOD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: GLOD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glyoxalase domain-containing protein 4 isoform X2
translation: MIGYGPEDDHFVVELTYNYGIGTYRLGNDFLGMTIQSSKAVKNARQRGWPMKECDDGTFETEAPGGYKFFLIDQDEPNTDPVQKVSLGVSDLQRSLHYWEALCGMKLYKKEEGKALLGFADSQCKLELQAIGGPVDHATAFGRVAFSCPREQLPDIQSLMQGENQKVITPLVSLDTPGKATVEVVIVADPDDHEICFVGDEAFRELSKPDPSGDSLLNQAIAEDKSGEWYAKHKRQKPTA
SIO_010081: GLOD4
subclass of: SO_0000673
so part of: GLOD4
location: join(1615502..1615594,1617570..1617714,1618128..1618258,1619139..1619225,1620755..1620868,1621364..1621450,1621657..1621722)
location: region:1615502-1621722:1
so has part: feature:1615502-1615594:1:exon
so has part: feature:1617570-1617714:1:exon
so has part: feature:1618128-1618258:1:exon
so has part: feature:1619139-1619225:1:exon
so has part: feature:1620755-1620868:1:exon
so has part: feature:1621364-1621450:1:exon
so has part: feature:1621657-1621722:1:exon

XP_032823494.1
type: Protein
SIO_000068: ncbiprotein

position:1615502:1
position: 1615502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1615502-1615594:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1617570-1617714:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1618128-1618258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1619139-1619225:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1620755-1620868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1621364-1621450:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1621657-1621722:1:exon

GEMIN4
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: GEMIN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1626824..1634224
location: region:1626824-1634224:1
so has part: feature:1626824-1634224:1:exon
subclass of: SO_0000010

116950123
type: Gene
SIO_000068: ncbigene

position:1626824:1
position: 1626824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1634224:1
position: 1634224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1626824-1634224:1:exon

GEMIN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: GEMIN4
product: gem nuclear organelle associated protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_032967604.1
SIO_010081: GEMIN4
subclass of: SO_0000673
so part of: GEMIN4
location: join(1626824..1627192,1628645..1628740,1630394..1634224)
location: region:1626824-1634224:1
so has part: feature:1626824-1627192:1:exon
so has part: feature:1628645-1628740:1:exon
so has part: feature:1630394-1634224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1626824-1627192:1:exon

position:1627192:1
position: 1627192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1628645-1628740:1:exon

position:1628645:1
position: 1628645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1628740:1
position: 1628740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1630394-1634224:1:exon

position:1630394:1
position: 1630394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GEMIN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: GEMIN4
product: gem nuclear organelle associated protein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_032967606.1
SIO_010081: GEMIN4
subclass of: SO_0000673
so part of: GEMIN4
location: join(1626824..1627192,1628645..1628740,1630397..1634224)
location: region:1626824-1634224:1
so has part: feature:1626824-1627192:1:exon
so has part: feature:1628645-1628740:1:exon
so has part: feature:1630397-1634224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1626824-1627192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1628645-1628740:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1630397-1634224:1:exon

position:1630397:1
position: 1630397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GEMIN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: GEMIN4
product: gem nuclear organelle associated protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_032967605.1
SIO_010081: GEMIN4
subclass of: SO_0000673
so part of: GEMIN4
location: join(1627207..1627338,1628645..1628740,1630394..1634224)
location: region:1627207-1634224:1
so has part: feature:1627207-1627338:1:exon
so has part: feature:1628645-1628740:1:exon
so has part: feature:1630394-1634224:1:exon

position:1627207:1
position: 1627207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1627207-1627338:1:exon

position:1627338:1
position: 1627338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1628645-1628740:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1630394-1634224:1:exon

GEMIN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: GEMIN4
product: gem nuclear organelle associated protein 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_032967607.1
SIO_010081: GEMIN4
subclass of: SO_0000673
so part of: GEMIN4
location: join(1627207..1627338,1628645..1628740,1630397..1634224)
location: region:1627207-1634224:1
so has part: feature:1627207-1627338:1:exon
so has part: feature:1628645-1628740:1:exon
so has part: feature:1630397-1634224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1627207-1627338:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1628645-1628740:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1630397-1634224:1:exon

GEMIN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: GEMIN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gem-associated protein 4 isoform X1
translation: MDTGAPVRGRTKLEEILAAGPMVFCSKMAILQGGLLLAERQLRPKRLEEMDKADWSTIRDAMLGTANEVCSSPEHSDIKKIHWKKKILALLWMKMLRMSPHCKTHNDGLQLDDDDNDDSESDLFFPINHMMPMINRTFLFELVKDLQAAAEFAQLMNLLPADVCARETKHFLAHVLKDAAEADVALLLDVWRGILLHTGCKKTEGELEKAFEDNLKPASPESVDICPAAKRPKKDNDCGVVLEKDIGASSVALVLELSASNYNDIPAYFIESLFKIAGEIVAPVHKYEALANFADTLFKSALHQKGLDLWGLPVEEYVDKVGVLLHLRGFKMSRDHNSTVEQVREVENEVYNNHSGGVLRLDVCQLNRYLKSFCELLEAWKEGLCIIQEDQPVASRAAVESYRMVDSLRRLCSVMSLNVSVSEDPVTTSDAISFEPLPLSNILAQLEPTHTWQVPDNVQLLVATSMVDRKMRRHQDVCELMIARVDWAIKEERWMQCLKKNISRLNTPQLVLALARTFAKVIAQLKGGLASESLLLLKAKRLKESLVSTFSALAPAGCNEVLRTVVEETGGDGLGVERLEALAEDFAMDMNLVFNCITDTSSGDGLSRAICTVGTAALLAPRATVNEICRQAVTNVGAPSIMAQVLLGLPALAMPVKNSRGDSLSMLLDCLSTRTLGQLSTEKEERQFVEFLRALTLSPQQSSNPLISPAEILNTFVLPYLQEQGSILEFALKIFSQILNIEGATKSDQKIEPLAIGGGGGRDDTETITNVQQTVIPSGGVSSSQFSELPVNAAHPQTKSCVQHWLMDCSPFPIIMCLSQQLERRKVCRCPDGLQTGEGEHSVMEIKSHLMEVLAQVCVIVQNAMSVETTDWVRSVDWLDHSVASMDWSVRLHLLPILSPQRKACAPEVLFGVCKLPDARWERCRSEDSSLYGPGTGLLAWIECCRVSDGLAEQMIKSLHVDQTQPEEVNLFSKGFLLVVTQILPECTLTEWRRVVRVMCRLLEARVLHVPVTLEYVQFLPLTDLRPFSVALRVSQLLLRVFQLLCGSSCAGWLSHAGWAHAVSLAAGTFVDMMREFGTRRSNAGPRGKVKHAERAAVNDLSMTVSPEQKIAQKKAKGKVKVEVDAKSKDGKAQGGVSVETETCEGVAGVSSPEGIGFAACQLFCHALHIMAMVKVDHCELLFLAALEILSTVEGARGAADSSCSTLEQANQKQFLEAIAENAAVPEHRATLLQKISQL
SIO_010081: GEMIN4
subclass of: SO_0000673
so part of: GEMIN4
location: join(1628686..1628740,1630394..1634058)
location: region:1628686-1634058:1
so has part: feature:1628686-1628740:1:exon
so has part: feature:1630394-1634058:1:exon

XP_032823495.1
type: Protein
SIO_000068: ncbiprotein

position:1628686:1
position: 1628686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1634058:1
position: 1634058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1628686-1628740:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1630394-1634058:1:exon

GEMIN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: GEMIN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gem-associated protein 4 isoform X1
translation: MDTGAPVRGRTKLEEILAAGPMVFCSKMAILQGGLLLAERQLRPKRLEEMDKADWSTIRDAMLGTANEVCSSPEHSDIKKIHWKKKILALLWMKMLRMSPHCKTHNDGLQLDDDDNDDSESDLFFPINHMMPMINRTFLFELVKDLQAAAEFAQLMNLLPADVCARETKHFLAHVLKDAAEADVALLLDVWRGILLHTGCKKTEGELEKAFEDNLKPASPESVDICPAAKRPKKDNDCGVVLEKDIGASSVALVLELSASNYNDIPAYFIESLFKIAGEIVAPVHKYEALANFADTLFKSALHQKGLDLWGLPVEEYVDKVGVLLHLRGFKMSRDHNSTVEQVREVENEVYNNHSGGVLRLDVCQLNRYLKSFCELLEAWKEGLCIIQEDQPVASRAAVESYRMVDSLRRLCSVMSLNVSVSEDPVTTSDAISFEPLPLSNILAQLEPTHTWQVPDNVQLLVATSMVDRKMRRHQDVCELMIARVDWAIKEERWMQCLKKNISRLNTPQLVLALARTFAKVIAQLKGGLASESLLLLKAKRLKESLVSTFSALAPAGCNEVLRTVVEETGGDGLGVERLEALAEDFAMDMNLVFNCITDTSSGDGLSRAICTVGTAALLAPRATVNEICRQAVTNVGAPSIMAQVLLGLPALAMPVKNSRGDSLSMLLDCLSTRTLGQLSTEKEERQFVEFLRALTLSPQQSSNPLISPAEILNTFVLPYLQEQGSILEFALKIFSQILNIEGATKSDQKIEPLAIGGGGGRDDTETITNVQQTVIPSGGVSSSQFSELPVNAAHPQTKSCVQHWLMDCSPFPIIMCLSQQLERRKVCRCPDGLQTGEGEHSVMEIKSHLMEVLAQVCVIVQNAMSVETTDWVRSVDWLDHSVASMDWSVRLHLLPILSPQRKACAPEVLFGVCKLPDARWERCRSEDSSLYGPGTGLLAWIECCRVSDGLAEQMIKSLHVDQTQPEEVNLFSKGFLLVVTQILPECTLTEWRRVVRVMCRLLEARVLHVPVTLEYVQFLPLTDLRPFSVALRVSQLLLRVFQLLCGSSCAGWLSHAGWAHAVSLAAGTFVDMMREFGTRRSNAGPRGKVKHAERAAVNDLSMTVSPEQKIAQKKAKGKVKVEVDAKSKDGKAQGGVSVETETCEGVAGVSSPEGIGFAACQLFCHALHIMAMVKVDHCELLFLAALEILSTVEGARGAADSSCSTLEQANQKQFLEAIAENAAVPEHRATLLQKISQL
SIO_010081: GEMIN4
subclass of: SO_0000673
so part of: GEMIN4
location: join(1628686..1628740,1630394..1634058)
location: region:1628686-1634058:1
so has part: feature:1628686-1628740:1:exon
so has part: feature:1630394-1634058:1:exon

XP_032823496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1628686-1628740:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1630394-1634058:1:exon

GEMIN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: GEMIN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gem-associated protein 4 isoform X2
translation: MDTGAPVRGRTKLEEILAGPMVFCSKMAILQGGLLLAERQLRPKRLEEMDKADWSTIRDAMLGTANEVCSSPEHSDIKKIHWKKKILALLWMKMLRMSPHCKTHNDGLQLDDDDNDDSESDLFFPINHMMPMINRTFLFELVKDLQAAAEFAQLMNLLPADVCARETKHFLAHVLKDAAEADVALLLDVWRGILLHTGCKKTEGELEKAFEDNLKPASPESVDICPAAKRPKKDNDCGVVLEKDIGASSVALVLELSASNYNDIPAYFIESLFKIAGEIVAPVHKYEALANFADTLFKSALHQKGLDLWGLPVEEYVDKVGVLLHLRGFKMSRDHNSTVEQVREVENEVYNNHSGGVLRLDVCQLNRYLKSFCELLEAWKEGLCIIQEDQPVASRAAVESYRMVDSLRRLCSVMSLNVSVSEDPVTTSDAISFEPLPLSNILAQLEPTHTWQVPDNVQLLVATSMVDRKMRRHQDVCELMIARVDWAIKEERWMQCLKKNISRLNTPQLVLALARTFAKVIAQLKGGLASESLLLLKAKRLKESLVSTFSALAPAGCNEVLRTVVEETGGDGLGVERLEALAEDFAMDMNLVFNCITDTSSGDGLSRAICTVGTAALLAPRATVNEICRQAVTNVGAPSIMAQVLLGLPALAMPVKNSRGDSLSMLLDCLSTRTLGQLSTEKEERQFVEFLRALTLSPQQSSNPLISPAEILNTFVLPYLQEQGSILEFALKIFSQILNIEGATKSDQKIEPLAIGGGGGRDDTETITNVQQTVIPSGGVSSSQFSELPVNAAHPQTKSCVQHWLMDCSPFPIIMCLSQQLERRKVCRCPDGLQTGEGEHSVMEIKSHLMEVLAQVCVIVQNAMSVETTDWVRSVDWLDHSVASMDWSVRLHLLPILSPQRKACAPEVLFGVCKLPDARWERCRSEDSSLYGPGTGLLAWIECCRVSDGLAEQMIKSLHVDQTQPEEVNLFSKGFLLVVTQILPECTLTEWRRVVRVMCRLLEARVLHVPVTLEYVQFLPLTDLRPFSVALRVSQLLLRVFQLLCGSSCAGWLSHAGWAHAVSLAAGTFVDMMREFGTRRSNAGPRGKVKHAERAAVNDLSMTVSPEQKIAQKKAKGKVKVEVDAKSKDGKAQGGVSVETETCEGVAGVSSPEGIGFAACQLFCHALHIMAMVKVDHCELLFLAALEILSTVEGARGAADSSCSTLEQANQKQFLEAIAENAAVPEHRATLLQKISQL
SIO_010081: GEMIN4
subclass of: SO_0000673
so part of: GEMIN4
location: join(1628686..1628740,1630397..1634058)
location: region:1628686-1634058:1
so has part: feature:1628686-1628740:1:exon
so has part: feature:1630397-1634058:1:exon

XP_032823497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1628686-1628740:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1630397-1634058:1:exon

GEMIN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: GEMIN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gem-associated protein 4 isoform X2
translation: MDTGAPVRGRTKLEEILAGPMVFCSKMAILQGGLLLAERQLRPKRLEEMDKADWSTIRDAMLGTANEVCSSPEHSDIKKIHWKKKILALLWMKMLRMSPHCKTHNDGLQLDDDDNDDSESDLFFPINHMMPMINRTFLFELVKDLQAAAEFAQLMNLLPADVCARETKHFLAHVLKDAAEADVALLLDVWRGILLHTGCKKTEGELEKAFEDNLKPASPESVDICPAAKRPKKDNDCGVVLEKDIGASSVALVLELSASNYNDIPAYFIESLFKIAGEIVAPVHKYEALANFADTLFKSALHQKGLDLWGLPVEEYVDKVGVLLHLRGFKMSRDHNSTVEQVREVENEVYNNHSGGVLRLDVCQLNRYLKSFCELLEAWKEGLCIIQEDQPVASRAAVESYRMVDSLRRLCSVMSLNVSVSEDPVTTSDAISFEPLPLSNILAQLEPTHTWQVPDNVQLLVATSMVDRKMRRHQDVCELMIARVDWAIKEERWMQCLKKNISRLNTPQLVLALARTFAKVIAQLKGGLASESLLLLKAKRLKESLVSTFSALAPAGCNEVLRTVVEETGGDGLGVERLEALAEDFAMDMNLVFNCITDTSSGDGLSRAICTVGTAALLAPRATVNEICRQAVTNVGAPSIMAQVLLGLPALAMPVKNSRGDSLSMLLDCLSTRTLGQLSTEKEERQFVEFLRALTLSPQQSSNPLISPAEILNTFVLPYLQEQGSILEFALKIFSQILNIEGATKSDQKIEPLAIGGGGGRDDTETITNVQQTVIPSGGVSSSQFSELPVNAAHPQTKSCVQHWLMDCSPFPIIMCLSQQLERRKVCRCPDGLQTGEGEHSVMEIKSHLMEVLAQVCVIVQNAMSVETTDWVRSVDWLDHSVASMDWSVRLHLLPILSPQRKACAPEVLFGVCKLPDARWERCRSEDSSLYGPGTGLLAWIECCRVSDGLAEQMIKSLHVDQTQPEEVNLFSKGFLLVVTQILPECTLTEWRRVVRVMCRLLEARVLHVPVTLEYVQFLPLTDLRPFSVALRVSQLLLRVFQLLCGSSCAGWLSHAGWAHAVSLAAGTFVDMMREFGTRRSNAGPRGKVKHAERAAVNDLSMTVSPEQKIAQKKAKGKVKVEVDAKSKDGKAQGGVSVETETCEGVAGVSSPEGIGFAACQLFCHALHIMAMVKVDHCELLFLAALEILSTVEGARGAADSSCSTLEQANQKQFLEAIAENAAVPEHRATLLQKISQL
SIO_010081: GEMIN4
subclass of: SO_0000673
so part of: GEMIN4
location: join(1628686..1628740,1630397..1634058)
location: region:1628686-1634058:1
so has part: feature:1628686-1628740:1:exon
so has part: feature:1630397-1634058:1:exon

XP_032823498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1628686-1628740:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1630397-1634058:1:exon

RNF26
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: RNF26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1641978..1644557
location: region:1641978-1644557:1
so has part: feature:1641978-1644557:1:exon
subclass of: SO_0000010

116950309
type: Gene
SIO_000068: ncbigene

position:1641978:1
position: 1641978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1644557:1
position: 1644557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1641978-1644557:1:exon

RNF26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: RNF26
product: ring finger protein 26
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032968032.1
SIO_010081: RNF26
subclass of: SO_0000673
so part of: RNF26
location: 1641978..1644557
location: region:1641978-1644557:1
so has part: feature:1641978-1644557:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1641978-1644557:1:exon

RNF26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: RNF26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF26
translation: MMVLLLEALFSTGALLLRVYEAACFVLEVHFALVSALLLVLRALLGLPGAALGLVTSGAAELLAASCRAACGGLALLRGLGLECLGALVAAPGATADAALAAARLPASAALGLAGALRAAAEALGNAGAALVAAAGSAANAVGGAVAANTAAVTNAVDAVASGAAASAMCAATNTADAALSAAAHSAGAVAAALSGAVAATAGAVTATAGAFASLLSAAGSVVGWSVEVAAGAVAYALGLATGALGAASAVATASLAAAVDFWLFALRLPLQLLSISAGAVATAVALQGLLVSAALIGLGVWYLSPRPRRRAAAYARVPRARILSAALRVASANLAALIRAALRRTAPGRHRQRLDVYPAPAPLAALQPPAARRGAPWGGDPGPARVDAPRPEPLPTEPVPDQRREEAAAAAVVEARERQRGEAARNGSGEAAGVRPLWEQQEFLRQEQEEEEDNHKSCVICQDQAKGTVLLPCRHLCLCSACARTIMRGPFNQQKCPLCRKMIVHTMDVFM
SIO_010081: RNF26
subclass of: SO_0000673
so part of: RNF26
location: 1641978..1643516
location: region:1641978-1643516:1
so has part: feature:1641978-1643516:1:exon

XP_032823923.1
type: Protein
SIO_000068: ncbiprotein

position:1643516:1
position: 1643516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1641978-1643516:1:exon

POLDIP2
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: POLDIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1651903..1676226)
location: region:1651903-1676226:-1
so has part: feature:1651903-1676226:-1:exon
subclass of: SO_0000010

116950124
type: Gene
SIO_000068: ncbigene

position:1651903:-1
position: 1651903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1676226:-1
position: 1676226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1651903-1676226:-1:exon

POLDIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: POLDIP2
product: DNA polymerase delta interacting protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_032967611.1
SIO_010081: POLDIP2
subclass of: SO_0000673
so part of: POLDIP2
location: complement(join(1651903..1652903,1658874..1658953,1660515..1660640,1661304..1661330,1663411..1663547,1664329..1664436,1664880..1664949,1666205..1666307,1667098..1667195,1669450..1669528,1675936..1676225))
location: region:1651903-1676225:-1
so has part: feature:1675936-1676225:-1:exon
so has part: feature:1669450-1669528:-1:exon
so has part: feature:1667098-1667195:-1:exon
so has part: feature:1666205-1666307:-1:exon
so has part: feature:1664880-1664949:-1:exon
so has part: feature:1664329-1664436:-1:exon
so has part: feature:1663411-1663547:-1:exon
so has part: feature:1661304-1661330:-1:exon
so has part: feature:1660515-1660640:-1:exon
so has part: feature:1658874-1658953:-1:exon
so has part: feature:1651903-1652903:-1:exon

position:1676225:-1
position: 1676225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1675936-1676225:-1:exon

position:1675936:-1
position: 1675936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1669450-1669528:-1:exon

position:1669450:-1
position: 1669450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1669528:-1
position: 1669528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1667098-1667195:-1:exon

position:1667098:-1
position: 1667098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1667195:-1
position: 1667195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1666205-1666307:-1:exon

position:1666205:-1
position: 1666205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1666307:-1
position: 1666307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1664880-1664949:-1:exon

position:1664880:-1
position: 1664880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664949:-1
position: 1664949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1664329-1664436:-1:exon

position:1664329:-1
position: 1664329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664436:-1
position: 1664436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1663411-1663547:-1:exon

position:1663411:-1
position: 1663411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1663547:-1
position: 1663547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1661304-1661330:-1:exon

position:1661304:-1
position: 1661304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1661330:-1
position: 1661330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1660515-1660640:-1:exon

position:1660515:-1
position: 1660515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1660640:-1
position: 1660640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1658874-1658953:-1:exon

position:1658874:-1
position: 1658874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1658953:-1
position: 1658953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1651903-1652903:-1:exon

position:1652903:-1
position: 1652903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLDIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: POLDIP2
product: DNA polymerase delta interacting protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_032967608.1
SIO_010081: POLDIP2
subclass of: SO_0000673
so part of: POLDIP2
location: complement(join(1651903..1652903,1658874..1658953,1660515..1660640,1661304..1661330,1663411..1663547,1664329..1664436,1664880..1664949,1666205..1666310,1667086..1667195,1669450..1669528,1675936..1676225))
location: region:1651903-1676225:-1
so has part: feature:1675936-1676225:-1:exon
so has part: feature:1669450-1669528:-1:exon
so has part: feature:1667086-1667195:-1:exon
so has part: feature:1666205-1666310:-1:exon
so has part: feature:1664880-1664949:-1:exon
so has part: feature:1664329-1664436:-1:exon
so has part: feature:1663411-1663547:-1:exon
so has part: feature:1661304-1661330:-1:exon
so has part: feature:1660515-1660640:-1:exon
so has part: feature:1658874-1658953:-1:exon
so has part: feature:1651903-1652903:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1675936-1676225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1669450-1669528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1667086-1667195:-1:exon

position:1667086:-1
position: 1667086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1666205-1666310:-1:exon

position:1666310:-1
position: 1666310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1664880-1664949:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1664329-1664436:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1663411-1663547:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1661304-1661330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1660515-1660640:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1658874-1658953:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1651903-1652903:-1:exon

POLDIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: POLDIP2
product: DNA polymerase delta interacting protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_032967610.1
SIO_010081: POLDIP2
subclass of: SO_0000673
so part of: POLDIP2
location: complement(join(1651903..1652903,1658874..1658953,1660515..1660640,1661304..1661330,1663411..1663547,1664329..1664436,1664880..1664949,1666205..1666310,1667098..1667195,1669450..1669528,1675936..1676223))
location: region:1651903-1676223:-1
so has part: feature:1675936-1676223:-1:exon
so has part: feature:1669450-1669528:-1:exon
so has part: feature:1667098-1667195:-1:exon
so has part: feature:1666205-1666310:-1:exon
so has part: feature:1664880-1664949:-1:exon
so has part: feature:1664329-1664436:-1:exon
so has part: feature:1663411-1663547:-1:exon
so has part: feature:1661304-1661330:-1:exon
so has part: feature:1660515-1660640:-1:exon
so has part: feature:1658874-1658953:-1:exon
so has part: feature:1651903-1652903:-1:exon

position:1676223:-1
position: 1676223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1675936-1676223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1669450-1669528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1667098-1667195:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1666205-1666310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1664880-1664949:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1664329-1664436:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1663411-1663547:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1661304-1661330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1660515-1660640:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1658874-1658953:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1651903-1652903:-1:exon

POLDIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: POLDIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polymerase delta-interacting protein 2 isoform X4
translation: MALRTFSYLRRQPGHGLLASLVAGGGPGPFLPRQGPRPPQSHEARACSGCALLLQARRYYSSRNRAEGKVLETVGILEAPRQGKYDTGQLFLHRVFGYRGVVLFPWQARLYDRDAAGNDDESKSEPPGGQQTGKEMKGKTHTYYQVLIDARDCPHISAQTEGVTFLANHEDSRALYAIPGLDYVSHEDVLPYNSMDKNPIQHELFDRFLNYDATKVPVFTACDTLHAWQQKNHPWLELSDVHRETTEGIRVTVTPFYMGARETQNALVYWWRYCIRLENLGEQTVQLRERHWRIFSLSGTLETVRGRGVVGREPILSKEQPAFQYSSHVSLQASSGHMWGTFRFEKPDSSQFDTRIPPFSLESKKDDDNKPTPQGYNW
SIO_010081: POLDIP2
subclass of: SO_0000673
so part of: POLDIP2
location: complement(join(1652783..1652903,1658874..1658953,1660515..1660640,1661304..1661330,1663411..1663547,1664329..1664436,1664880..1664949,1666205..1666307,1667098..1667195,1669450..1669528,1675936..1676123))
location: region:1652783-1676123:-1
so has part: feature:1675936-1676123:-1:exon
so has part: feature:1669450-1669528:-1:exon
so has part: feature:1667098-1667195:-1:exon
so has part: feature:1666205-1666307:-1:exon
so has part: feature:1664880-1664949:-1:exon
so has part: feature:1664329-1664436:-1:exon
so has part: feature:1663411-1663547:-1:exon
so has part: feature:1661304-1661330:-1:exon
so has part: feature:1660515-1660640:-1:exon
so has part: feature:1658874-1658953:-1:exon
so has part: feature:1652783-1652903:-1:exon

XP_032823502.1
type: Protein
SIO_000068: ncbiprotein

position:1652783:-1
position: 1652783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1676123:-1
position: 1676123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1675936-1676123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1669450-1669528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1667098-1667195:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1666205-1666307:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1664880-1664949:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1664329-1664436:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1663411-1663547:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1661304-1661330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1660515-1660640:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1658874-1658953:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1652783-1652903:-1:exon

POLDIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: POLDIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polymerase delta-interacting protein 2 isoform X3
translation: MALRTFSYLRRQPGHGLLASLVAGGGPGPFLPRQGPRPPQSHEARACSGCALLLQARRYYSSRNRAEGKVLETVGILEAPRQGKYDTGQLFLHRVFGYRGVVLFPWQARLYDRDAAGNDDESSKSEPPGGQQTGKEMKGKTHTYYQVLIDARDCPHISAQTEGVTFLANHEDSRALYAIPGLDYVSHEDVLPYNSMDKNPIQHELFDRFLNYDATKVPVFTACDTLHAWQQKNHPWLELSDVHRETTEGIRVTVTPFYMGARETQNALVYWWRYCIRLENLGEQTVQLRERHWRIFSLSGTLETVRGRGVVGREPILSKEQPAFQYSSHVSLQASSGHMWGTFRFEKPDSSQFDTRIPPFSLESKKDDDNKPTPQGYNW
SIO_010081: POLDIP2
subclass of: SO_0000673
so part of: POLDIP2
location: complement(join(1652783..1652903,1658874..1658953,1660515..1660640,1661304..1661330,1663411..1663547,1664329..1664436,1664880..1664949,1666205..1666310,1667098..1667195,1669450..1669528,1675936..1676123))
location: region:1652783-1676123:-1
so has part: feature:1675936-1676123:-1:exon
so has part: feature:1669450-1669528:-1:exon
so has part: feature:1667098-1667195:-1:exon
so has part: feature:1666205-1666310:-1:exon
so has part: feature:1664880-1664949:-1:exon
so has part: feature:1664329-1664436:-1:exon
so has part: feature:1663411-1663547:-1:exon
so has part: feature:1661304-1661330:-1:exon
so has part: feature:1660515-1660640:-1:exon
so has part: feature:1658874-1658953:-1:exon
so has part: feature:1652783-1652903:-1:exon

XP_032823501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1675936-1676123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1669450-1669528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1667098-1667195:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1666205-1666310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1664880-1664949:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1664329-1664436:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1663411-1663547:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1661304-1661330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1660515-1660640:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1658874-1658953:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1652783-1652903:-1:exon

POLDIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: POLDIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polymerase delta-interacting protein 2 isoform X1
translation: MALRTFSYLRRQPGHGLLASLVAGGGPGPFLPRQGPRPPQSHEARACSGCALLLQARRYYSSRNRAEGKVLETVGILEAPRQGKYDTGQLFLHRVFGYRGVVLFPWQARLYDRDAAGNDDERHVSISKSEPPGGQQTGKEMKGKTHTYYQVLIDARDCPHISAQTEGVTFLANHEDSRALYAIPGLDYVSHEDVLPYNSMDKNPIQHELFDRFLNYDATKVPVFTACDTLHAWQQKNHPWLELSDVHRETTEGIRVTVTPFYMGARETQNALVYWWRYCIRLENLGEQTVQLRERHWRIFSLSGTLETVRGRGVVGREPILSKEQPAFQYSSHVSLQASSGHMWGTFRFEKPDSSQFDTRIPPFSLESKKDDDNKPTPQGYNW
SIO_010081: POLDIP2
subclass of: SO_0000673
so part of: POLDIP2
location: complement(join(1652783..1652903,1658874..1658953,1660515..1660640,1661304..1661330,1663411..1663547,1664329..1664436,1664880..1664949,1666205..1666310,1667086..1667195,1669450..1669528,1675936..1676123))
location: region:1652783-1676123:-1
so has part: feature:1675936-1676123:-1:exon
so has part: feature:1669450-1669528:-1:exon
so has part: feature:1667086-1667195:-1:exon
so has part: feature:1666205-1666310:-1:exon
so has part: feature:1664880-1664949:-1:exon
so has part: feature:1664329-1664436:-1:exon
so has part: feature:1663411-1663547:-1:exon
so has part: feature:1661304-1661330:-1:exon
so has part: feature:1660515-1660640:-1:exon
so has part: feature:1658874-1658953:-1:exon
so has part: feature:1652783-1652903:-1:exon

XP_032823499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1675936-1676123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1669450-1669528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1667086-1667195:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1666205-1666310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1664880-1664949:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1664329-1664436:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1663411-1663547:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1661304-1661330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1660515-1660640:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1658874-1658953:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1652783-1652903:-1:exon

POLDIP2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7757
gene: POLDIP2
product: DNA polymerase delta interacting protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004403967.1
SIO_010081: POLDIP2
so part of: POLDIP2
location: complement(join(1653135..1653747,1655701..1655885,1658874..1658953,1660515..1660640,1661304..1661330,1663411..1663547,1664329..1664436,1664880..1664949,1666205..1666310,1667086..1667195,1669450..1669528,1675936..1676226))
location: region:1653135-1676226:-1
so has part: feature:1675936-1676226:-1:exon
so has part: feature:1669450-1669528:-1:exon
so has part: feature:1667086-1667195:-1:exon
so has part: feature:1666205-1666310:-1:exon
so has part: feature:1664880-1664949:-1:exon
so has part: feature:1664329-1664436:-1:exon
so has part: feature:1663411-1663547:-1:exon
so has part: feature:1661304-1661330:-1:exon
so has part: feature:1660515-1660640:-1:exon
so has part: feature:1658874-1658953:-1:exon
so has part: feature:1655701-1655885:-1:exon
so has part: feature:1653135-1653747:-1:exon

position:1653135:-1
position: 1653135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1675936-1676226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1669450-1669528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1667086-1667195:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1666205-1666310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1664880-1664949:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1664329-1664436:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1663411-1663547:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1661304-1661330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1660515-1660640:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1658874-1658953:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1655701-1655885:-1:exon

position:1655701:-1
position: 1655701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1655885:-1
position: 1655885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1653135-1653747:-1:exon

position:1653747:-1
position: 1653747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLDIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: POLDIP2
product: DNA polymerase delta interacting protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_032967609.1
SIO_010081: POLDIP2
subclass of: SO_0000673
so part of: POLDIP2
location: complement(join(1654992..1655885,1658874..1658953,1660515..1660640,1661304..1661330,1663411..1663547,1664329..1664436,1664880..1664949,1666205..1666310,1667086..1667195,1669450..1669528,1675936..1676226))
location: region:1654992-1676226:-1
so has part: feature:1675936-1676226:-1:exon
so has part: feature:1669450-1669528:-1:exon
so has part: feature:1667086-1667195:-1:exon
so has part: feature:1666205-1666310:-1:exon
so has part: feature:1664880-1664949:-1:exon
so has part: feature:1664329-1664436:-1:exon
so has part: feature:1663411-1663547:-1:exon
so has part: feature:1661304-1661330:-1:exon
so has part: feature:1660515-1660640:-1:exon
so has part: feature:1658874-1658953:-1:exon
so has part: feature:1654992-1655885:-1:exon

position:1654992:-1
position: 1654992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1675936-1676226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1669450-1669528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1667086-1667195:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1666205-1666310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1664880-1664949:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1664329-1664436:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1663411-1663547:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1661304-1661330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1660515-1660640:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1658874-1658953:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1654992-1655885:-1:exon

POLDIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: POLDIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polymerase delta-interacting protein 2 isoform X2
translation: MALRTFSYLRRQPGHGLLASLVAGGGPGPFLPRQGPRPPQSHEARACSGCALLLQARRYYSSRNRAEGKVLETVGILEAPRQGKYDTGQLFLHRVFGYRGVVLFPWQARLYDRDAAGNDDERHVSISKSEPPGGQQTGKEMKGKTHTYYQVLIDARDCPHISAQTEGVTFLANHEDSRALYAIPGLDYVSHEDVLPYNSMDKNPIQHELFDRFLNYDATKVPVFTACDTLHAWQQKNHPWLELSDVHRETTEGIRVTVTPFYMGARETQNALVYWWRYCIRLENLGEQTVQLRERHWRIFSLSGTLETVRGRGVVGREPILSKEQPAFQYSSHVSLQASSGHMWGSFVFERDNGSSFEGQIPNFDLDSQTDAYFGPFANLV
SIO_010081: POLDIP2
subclass of: SO_0000673
so part of: POLDIP2
location: complement(join(1655771..1655885,1658874..1658953,1660515..1660640,1661304..1661330,1663411..1663547,1664329..1664436,1664880..1664949,1666205..1666310,1667086..1667195,1669450..1669528,1675936..1676123))
location: region:1655771-1676123:-1
so has part: feature:1675936-1676123:-1:exon
so has part: feature:1669450-1669528:-1:exon
so has part: feature:1667086-1667195:-1:exon
so has part: feature:1666205-1666310:-1:exon
so has part: feature:1664880-1664949:-1:exon
so has part: feature:1664329-1664436:-1:exon
so has part: feature:1663411-1663547:-1:exon
so has part: feature:1661304-1661330:-1:exon
so has part: feature:1660515-1660640:-1:exon
so has part: feature:1658874-1658953:-1:exon
so has part: feature:1655771-1655885:-1:exon

XP_032823500.1
type: Protein
SIO_000068: ncbiprotein

position:1655771:-1
position: 1655771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1675936-1676123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1669450-1669528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1667086-1667195:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1666205-1666310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1664880-1664949:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1664329-1664436:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1663411-1663547:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1661304-1661330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1660515-1660640:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1658874-1658953:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1655771-1655885:-1:exon

TMEM199
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TMEM199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1679920..1692677
location: region:1679920-1692677:1
so has part: feature:1679920-1692677:1:exon
subclass of: SO_0000010

116950126
type: Gene
SIO_000068: ncbigene

position:1679920:1
position: 1679920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692677:1
position: 1692677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1679920-1692677:1:exon

TMEM199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TMEM199
product: transmembrane protein 199, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032967615.1
SIO_010081: TMEM199
subclass of: SO_0000673
so part of: TMEM199
location: join(1679920..1680006,1681043..1681403,1683186..1683259,1683671..1683760,1684897..1684939,1685652..1685764,1689831..1692677)
location: region:1679920-1692677:1
so has part: feature:1679920-1680006:1:exon
so has part: feature:1681043-1681403:1:exon
so has part: feature:1683186-1683259:1:exon
so has part: feature:1683671-1683760:1:exon
so has part: feature:1684897-1684939:1:exon
so has part: feature:1685652-1685764:1:exon
so has part: feature:1689831-1692677:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1679920-1680006:1:exon

position:1680006:1
position: 1680006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1681043-1681403:1:exon

position:1681043:1
position: 1681043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1681403:1
position: 1681403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1683186-1683259:1:exon

position:1683186:1
position: 1683186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1683259:1
position: 1683259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1683671-1683760:1:exon

position:1683671:1
position: 1683671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1683760:1
position: 1683760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1684897-1684939:1:exon

position:1684897:1
position: 1684897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684939:1
position: 1684939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1685652-1685764:1:exon

position:1685652:1
position: 1685652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1685764:1
position: 1685764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1689831-1692677:1:exon

position:1689831:1
position: 1689831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TMEM199
product: transmembrane protein 199, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_032967612.1
SIO_010081: TMEM199
subclass of: SO_0000673
so part of: TMEM199
location: join(1679999..1680133,1681043..1681403,1683186..1683259,1683671..1683760,1684897..1684939,1685652..1685764,1689831..1692677)
location: region:1679999-1692677:1
so has part: feature:1679999-1680133:1:exon
so has part: feature:1681043-1681403:1:exon
so has part: feature:1683186-1683259:1:exon
so has part: feature:1683671-1683760:1:exon
so has part: feature:1684897-1684939:1:exon
so has part: feature:1685652-1685764:1:exon
so has part: feature:1689831-1692677:1:exon

position:1679999:1
position: 1679999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1679999-1680133:1:exon

position:1680133:1
position: 1680133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1681043-1681403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683186-1683259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1683671-1683760:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1684897-1684939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1685652-1685764:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1689831-1692677:1:exon

TMEM199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TMEM199
product: transmembrane protein 199, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_032967617.1
SIO_010081: TMEM199
subclass of: SO_0000673
so part of: TMEM199
location: join(1680348..1680366,1681043..1681403,1683186..1683259,1683671..1683760,1684897..1684939,1685652..1685764,1689831..1692677)
location: region:1680348-1692677:1
so has part: feature:1680348-1680366:1:exon
so has part: feature:1681043-1681403:1:exon
so has part: feature:1683186-1683259:1:exon
so has part: feature:1683671-1683760:1:exon
so has part: feature:1684897-1684939:1:exon
so has part: feature:1685652-1685764:1:exon
so has part: feature:1689831-1692677:1:exon

position:1680348:1
position: 1680348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1680348-1680366:1:exon

position:1680366:1
position: 1680366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1681043-1681403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683186-1683259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1683671-1683760:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1684897-1684939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1685652-1685764:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1689831-1692677:1:exon

TMEM199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TMEM199
product: transmembrane protein 199, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_032967613.1
SIO_010081: TMEM199
subclass of: SO_0000673
so part of: TMEM199
location: join(1680356..1680491,1681043..1681403,1683186..1683259,1683671..1683760,1684897..1684939,1685652..1685764,1689831..1692677)
location: region:1680356-1692677:1
so has part: feature:1680356-1680491:1:exon
so has part: feature:1681043-1681403:1:exon
so has part: feature:1683186-1683259:1:exon
so has part: feature:1683671-1683760:1:exon
so has part: feature:1684897-1684939:1:exon
so has part: feature:1685652-1685764:1:exon
so has part: feature:1689831-1692677:1:exon

position:1680356:1
position: 1680356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1680356-1680491:1:exon

position:1680491:1
position: 1680491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1681043-1681403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683186-1683259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1683671-1683760:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1684897-1684939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1685652-1685764:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1689831-1692677:1:exon

TMEM199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: TMEM199
product: transmembrane protein 199, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_032967614.1
SIO_010081: TMEM199
subclass of: SO_0000673
so part of: TMEM199
location: join(1680373..1680523,1681043..1681403,1683186..1683259,1683671..1683760,1684897..1684939,1685652..1685764,1689831..1692677)
location: region:1680373-1692677:1
so has part: feature:1680373-1680523:1:exon
so has part: feature:1681043-1681403:1:exon
so has part: feature:1683186-1683259:1:exon
so has part: feature:1683671-1683760:1:exon
so has part: feature:1684897-1684939:1:exon
so has part: feature:1685652-1685764:1:exon
so has part: feature:1689831-1692677:1:exon

position:1680373:1
position: 1680373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1680373-1680523:1:exon

position:1680523:1
position: 1680523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1681043-1681403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683186-1683259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1683671-1683760:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1684897-1684939:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1685652-1685764:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1689831-1692677:1:exon

TMEM199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TMEM199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 199
translation: MATAVKMTARVRDAFSSALRDESLAGELRAELEAALREQDGAVPFTTLRHLHGASRSQQEPLYLHELLEGSELYFPEPEKPARNPELVARLEKLKAQQDNAEYRRMVRNVDCKRLNQYGSIEDIGKEMKSVKAMVVTMFNFLITVVAAYVCVYLASQYVLPNTTSRVLAGVIAASVVGLAELYALVKTVEGEMGNL
SIO_010081: TMEM199
subclass of: SO_0000673
so part of: TMEM199
location: join(1681229..1681403,1683186..1683259,1683671..1683760,1684897..1684939,1685652..1685764,1689831..1689926)
location: region:1681229-1689926:1
so has part: feature:1681229-1681403:1:exon
so has part: feature:1683186-1683259:1:exon
so has part: feature:1683671-1683760:1:exon
so has part: feature:1684897-1684939:1:exon
so has part: feature:1685652-1685764:1:exon
so has part: feature:1689831-1689926:1:exon

XP_032823503.1
type: Protein
SIO_000068: ncbiprotein

position:1681229:1
position: 1681229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1689926:1
position: 1689926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1681229-1681403:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683186-1683259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683671-1683760:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1684897-1684939:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1685652-1685764:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1689831-1689926:1:exon

TMEM199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TMEM199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 199
translation: MATAVKMTARVRDAFSSALRDESLAGELRAELEAALREQDGAVPFTTLRHLHGASRSQQEPLYLHELLEGSELYFPEPEKPARNPELVARLEKLKAQQDNAEYRRMVRNVDCKRLNQYGSIEDIGKEMKSVKAMVVTMFNFLITVVAAYVCVYLASQYVLPNTTSRVLAGVIAASVVGLAELYALVKTVEGEMGNL
SIO_010081: TMEM199
subclass of: SO_0000673
so part of: TMEM199
location: join(1681229..1681403,1683186..1683259,1683671..1683760,1684897..1684939,1685652..1685764,1689831..1689926)
location: region:1681229-1689926:1
so has part: feature:1681229-1681403:1:exon
so has part: feature:1683186-1683259:1:exon
so has part: feature:1683671-1683760:1:exon
so has part: feature:1684897-1684939:1:exon
so has part: feature:1685652-1685764:1:exon
so has part: feature:1689831-1689926:1:exon

XP_032823504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1681229-1681403:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683186-1683259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683671-1683760:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1684897-1684939:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1685652-1685764:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1689831-1689926:1:exon

TMEM199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TMEM199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 199
translation: MATAVKMTARVRDAFSSALRDESLAGELRAELEAALREQDGAVPFTTLRHLHGASRSQQEPLYLHELLEGSELYFPEPEKPARNPELVARLEKLKAQQDNAEYRRMVRNVDCKRLNQYGSIEDIGKEMKSVKAMVVTMFNFLITVVAAYVCVYLASQYVLPNTTSRVLAGVIAASVVGLAELYALVKTVEGEMGNL
SIO_010081: TMEM199
subclass of: SO_0000673
so part of: TMEM199
location: join(1681229..1681403,1683186..1683259,1683671..1683760,1684897..1684939,1685652..1685764,1689831..1689926)
location: region:1681229-1689926:1
so has part: feature:1681229-1681403:1:exon
so has part: feature:1683186-1683259:1:exon
so has part: feature:1683671-1683760:1:exon
so has part: feature:1684897-1684939:1:exon
so has part: feature:1685652-1685764:1:exon
so has part: feature:1689831-1689926:1:exon

XP_032823505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1681229-1681403:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683186-1683259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683671-1683760:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1684897-1684939:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1685652-1685764:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1689831-1689926:1:exon

TMEM199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TMEM199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 199
translation: MATAVKMTARVRDAFSSALRDESLAGELRAELEAALREQDGAVPFTTLRHLHGASRSQQEPLYLHELLEGSELYFPEPEKPARNPELVARLEKLKAQQDNAEYRRMVRNVDCKRLNQYGSIEDIGKEMKSVKAMVVTMFNFLITVVAAYVCVYLASQYVLPNTTSRVLAGVIAASVVGLAELYALVKTVEGEMGNL
SIO_010081: TMEM199
subclass of: SO_0000673
so part of: TMEM199
location: join(1681229..1681403,1683186..1683259,1683671..1683760,1684897..1684939,1685652..1685764,1689831..1689926)
location: region:1681229-1689926:1
so has part: feature:1681229-1681403:1:exon
so has part: feature:1683186-1683259:1:exon
so has part: feature:1683671-1683760:1:exon
so has part: feature:1684897-1684939:1:exon
so has part: feature:1685652-1685764:1:exon
so has part: feature:1689831-1689926:1:exon

XP_032823506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1681229-1681403:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683186-1683259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683671-1683760:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1684897-1684939:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1685652-1685764:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1689831-1689926:1:exon

TMEM199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: TMEM199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 199
translation: MATAVKMTARVRDAFSSALRDESLAGELRAELEAALREQDGAVPFTTLRHLHGASRSQQEPLYLHELLEGSELYFPEPEKPARNPELVARLEKLKAQQDNAEYRRMVRNVDCKRLNQYGSIEDIGKEMKSVKAMVVTMFNFLITVVAAYVCVYLASQYVLPNTTSRVLAGVIAASVVGLAELYALVKTVEGEMGNL
SIO_010081: TMEM199
subclass of: SO_0000673
so part of: TMEM199
location: join(1681229..1681403,1683186..1683259,1683671..1683760,1684897..1684939,1685652..1685764,1689831..1689926)
location: region:1681229-1689926:1
so has part: feature:1681229-1681403:1:exon
so has part: feature:1683186-1683259:1:exon
so has part: feature:1683671-1683760:1:exon
so has part: feature:1684897-1684939:1:exon
so has part: feature:1685652-1685764:1:exon
so has part: feature:1689831-1689926:1:exon

XP_032823508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1681229-1681403:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683186-1683259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683671-1683760:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1684897-1684939:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1685652-1685764:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1689831-1689926:1:exon

AKAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: AKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1696751..1740638
location: region:1696751-1740638:1
so has part: feature:1696751-1740638:1:exon
subclass of: SO_0000010

116950128
type: Gene
SIO_000068: ncbigene

position:1696751:1
position: 1696751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1740638:1
position: 1740638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1696751-1740638:1:exon

AKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: AKAP1
product: A-kinase anchoring protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_032967620.1
SIO_010081: AKAP1
subclass of: SO_0000673
so part of: AKAP1
location: join(1696751..1696952,1709761..1712528,1713534..1713631,1715473..1715599,1718216..1718340,1718826..1719000,1731788..1731935,1732533..1732600,1733595..1733668,1735782..1735847,1737041..1740638)
location: region:1696751-1740638:1
so has part: feature:1696751-1696952:1:exon
so has part: feature:1709761-1712528:1:exon
so has part: feature:1713534-1713631:1:exon
so has part: feature:1715473-1715599:1:exon
so has part: feature:1718216-1718340:1:exon
so has part: feature:1718826-1719000:1:exon
so has part: feature:1731788-1731935:1:exon
so has part: feature:1732533-1732600:1:exon
so has part: feature:1733595-1733668:1:exon
so has part: feature:1735782-1735847:1:exon
so has part: feature:1737041-1740638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1696751-1696952:1:exon

position:1696952:1
position: 1696952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1709761-1712528:1:exon

position:1709761:1
position: 1709761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1712528:1
position: 1712528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1713534-1713631:1:exon

position:1713534:1
position: 1713534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1713631:1
position: 1713631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1715473-1715599:1:exon

position:1715473:1
position: 1715473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1715599:1
position: 1715599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1718216-1718340:1:exon

position:1718216:1
position: 1718216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1718340:1
position: 1718340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1718826-1719000:1:exon

position:1718826:1
position: 1718826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1719000:1
position: 1719000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1731788-1731935:1:exon

position:1731788:1
position: 1731788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1731935:1
position: 1731935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1732533-1732600:1:exon

position:1732533:1
position: 1732533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1732600:1
position: 1732600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1733595-1733668:1:exon

position:1733595:1
position: 1733595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1733668:1
position: 1733668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1735782-1735847:1:exon

position:1735782:1
position: 1735782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1735847:1
position: 1735847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1737041-1740638:1:exon

position:1737041:1
position: 1737041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: AKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A-kinase anchor protein 1, mitochondrial
translation: MLWRALHRYYPYALPGVAAVAAWAWYSWRRKAACKATSTGNSTKRTQSCDGVAAPADSSRVCANPDDELNVCAAPDVDPLGPREYPATYPPGSAGCLSAEACVGPSVGDADGVLSAKFGAVLPDKRDGLTCGAGETTASPGETAEVPVAARAATDLSAGACESLSERETPVERPEDKSCDALPSSDAHDTPSSLAASSNRNLLAEPLAAPHSTSERETFATADTSDISSAADSISPLSAGASTDRSIMDIGDALGLVNNSGALLSNERKDLSSSDLRNGPDAVGSVPKAVAVVNQSPAKLDSPVAVETIASLTPLHARGSSASPEAGDASTSTNASGGKRDVIADARRTSEPARAHGSRRVGAADSTVAANAGRPSAVATICSRDVPSSIVKAPRATLVSRDVGESAPTLERSELRCQNGKECEAKAAAADGAASTNGSRASAGKMVRERNVSDGVLLDESVGGGAALRKAGRAATGGCDDGKAPKGEALERGESCEVGEEGRANDCGERYDPEGSDKVDPLCLKMEMGGKISRENYLGGSGKDDKNDDRFIQEAEPLDLKDTHAVRCSPLETASRSNDSQPTPGTNSVAVAGGVKCDLEIPGSFERKAKIPALCREEPESSPPDKTTRAEEARHNGGDAADCKAPEERFASGFVEKLIRDARVSFANVLLEGSDESENRPVLSSRLSAEAAPFMPTSAEATVAEAVPRGGVESPPAHAASEGRRARGREPAAGASPSDAKGKGDKKTAEAESLVKSNLSAEAAPFTPTPVENLPAGKRSVGEETSEGEATSENALYVGDLWKNLNFGVNMKELENSPNEGKSGSKFFPLSCPEGKWLMKDRTAEKSPKRKAVKVAVEFLDKNSAGGGRVPAALPVDVCTRGDPKEAAVDAEENMTNGLSTGSENSESTVMLDDSYGEAVSDGNCPCVTGSGDDGEMVIWEFHVSKILVGRLIGKQGKFINYLKEGSGAKIYIIQLAFTSDFQVVHIEGTDKQVDAALKLIRKKFKNLNMKNIAAPVLPPIGHVVVPVAPVPIPQGISVDVTVPWFDAYGNLFLQQYTHPTFHALDSLDQALNACYSQPNLPTPPPLSVNSVCAALLESHWYRAQIVEYYPESNEVEVKCLDYGGYYKILDSDLRQLRTDFLTLPFQASLVFFANIAPPPDHTCYSEEALLAVNKLTLGAHLIAEVTQFDTVSQMPFVNLWLIKDGRSQMINKMLVDAGHARWLS
SIO_010081: AKAP1
subclass of: SO_0000673
so part of: AKAP1
location: join(1709789..1712528,1713534..1713631,1715473..1715599,1718216..1718340,1718826..1719000,1731788..1731935,1732533..1732600,1733595..1733668,1735782..1735847,1737041..1737097)
location: region:1709789-1737097:1
so has part: feature:1709789-1712528:1:exon
so has part: feature:1713534-1713631:1:exon
so has part: feature:1715473-1715599:1:exon
so has part: feature:1718216-1718340:1:exon
so has part: feature:1718826-1719000:1:exon
so has part: feature:1731788-1731935:1:exon
so has part: feature:1732533-1732600:1:exon
so has part: feature:1733595-1733668:1:exon
so has part: feature:1735782-1735847:1:exon
so has part: feature:1737041-1737097:1:exon

XP_032823511.1
type: Protein
SIO_000068: ncbiprotein

position:1709789:1
position: 1709789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1737097:1
position: 1737097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1709789-1712528:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1713534-1713631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1715473-1715599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1718216-1718340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1718826-1719000:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1731788-1731935:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1732533-1732600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1733595-1733668:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1735782-1735847:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1737041-1737097:1:exon

LOC116950327
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950327
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 1724850..1725066
location: region:1724850-1725066:1
so has part: feature:1724850-1725066:1:exon

116950327
type: Gene
SIO_000068: ncbigene

position:1724850:1
position: 1724850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1725066:1
position: 1725066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1724850-1725066:1:exon

LOC116950327
type: Exon
subclass of: SO_0000147
RO_0002162: 7757
gene: LOC116950327
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116950327
subclass of: SO_0000673
so part of: LOC116950327
location: 1724850..1725066
location: region:1724850-1725066:1
so has part: feature:1724850-1725066:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1724850-1725066:1:exon

LOC116950130
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116950130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1745429..1751695)
location: region:1745429-1751695:-1
so has part: feature:1745429-1751695:-1:exon
subclass of: SO_0000010

116950130
type: Gene
SIO_000068: ncbigene

position:1745429:-1
position: 1745429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1751695:-1
position: 1751695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1745429-1751695:-1:exon

LOC116950130
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116950130
product: putative methyltransferase DDB_G0268948
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032967625.1
SIO_010081: LOC116950130
subclass of: SO_0000673
so part of: LOC116950130
location: complement(join(1745429..1745700,1747139..1747276,1748312..1748412,1749470..1749683,1751027..1751695))
location: region:1745429-1751695:-1
so has part: feature:1751027-1751695:-1:exon
so has part: feature:1749470-1749683:-1:exon
so has part: feature:1748312-1748412:-1:exon
so has part: feature:1747139-1747276:-1:exon
so has part: feature:1745429-1745700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1751027-1751695:-1:exon

position:1751027:-1
position: 1751027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1749470-1749683:-1:exon

position:1749470:-1
position: 1749470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1749683:-1
position: 1749683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1748312-1748412:-1:exon

position:1748312:-1
position: 1748312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1748412:-1
position: 1748412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1747139-1747276:-1:exon

position:1747139:-1
position: 1747139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747276:-1
position: 1747276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1745429-1745700:-1:exon

position:1745700:-1
position: 1745700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116950130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116950130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative methyltransferase DDB_G0268948
translation: MPQTGGVPSLAVDVGCGSGQCTRLLSRCCPRVVGVDVSEAMIREATRVNRTENIAYTVGTAEKLPFLDGSVGLLCATSAANVFNLPDFVREAARVLQPGGCLAVYAMLYPMRLKYGGVSSELTAILQEMLEELRPYEHERMRHLRNGYADIYTGITFADKERKEGIELSVQMTLQDLLRFIGCFSEYQALRKENPKRGDTFMQSLGQRLQEARGRTAPDTELELNADTAVLLACKTPTA
SIO_010081: LOC116950130
subclass of: SO_0000673
so part of: LOC116950130
location: complement(join(1745604..1745700,1747139..1747276,1748312..1748412,1749470..1749683,1751027..1751196))
location: region:1745604-1751196:-1
so has part: feature:1751027-1751196:-1:exon
so has part: feature:1749470-1749683:-1:exon
so has part: feature:1748312-1748412:-1:exon
so has part: feature:1747139-1747276:-1:exon
so has part: feature:1745604-1745700:-1:exon

XP_032823516.1
type: Protein
SIO_000068: ncbiprotein

position:1745604:-1
position: 1745604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1751196:-1
position: 1751196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1751027-1751196:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1749470-1749683:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1748312-1748412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1747139-1747276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1745604-1745700:-1:exon

USP32
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: USP32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1785296..1869122
location: region:1785296-1869122:1
so has part: feature:1785296-1869122:1:exon
subclass of: SO_0000010

116950127
type: Gene
SIO_000068: ncbigene

position:1785296:1
position: 1785296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1869122:1
position: 1869122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1785296-1869122:1:exon

USP32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: USP32
product: ubiquitin specific peptidase 32, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032967618.1
SIO_010081: USP32
subclass of: SO_0000673
so part of: USP32
location: join(1785296..1785607,1792751..1792875,1795200..1795305,1795769..1795890,1799272..1799431,1820138..1820269,1821434..1821541,1823932..1824047,1825441..1825503,1826564..1826647,1827720..1827781,1828921..1829023,1830852..1831014,1831736..1831950,1832396..1832536,1833437..1833554,1834259..1834413,1836764..1836845,1842666..1842743,1843298..1843436,1844162..1844267,1844606..1844779,1845006..1845180,1846743..1846894,1848303..1848432,1849388..1849629,1851035..1851219,1852556..1852642,1853856..1853979,1854386..1854577,1855728..1856067,1856800..1857530,1859631..1859825,1860974..1861066,1861477..1869122)
location: region:1785296-1869122:1
so has part: feature:1785296-1785607:1:exon
so has part: feature:1792751-1792875:1:exon
so has part: feature:1795200-1795305:1:exon
so has part: feature:1795769-1795890:1:exon
so has part: feature:1799272-1799431:1:exon
so has part: feature:1820138-1820269:1:exon
so has part: feature:1821434-1821541:1:exon
so has part: feature:1823932-1824047:1:exon
so has part: feature:1825441-1825503:1:exon
so has part: feature:1826564-1826647:1:exon
so has part: feature:1827720-1827781:1:exon
so has part: feature:1828921-1829023:1:exon
so has part: feature:1830852-1831014:1:exon
so has part: feature:1831736-1831950:1:exon
so has part: feature:1832396-1832536:1:exon
so has part: feature:1833437-1833554:1:exon
so has part: feature:1834259-1834413:1:exon
so has part: feature:1836764-1836845:1:exon
so has part: feature:1842666-1842743:1:exon
so has part: feature:1843298-1843436:1:exon
so has part: feature:1844162-1844267:1:exon
so has part: feature:1844606-1844779:1:exon
so has part: feature:1845006-1845180:1:exon
so has part: feature:1846743-1846894:1:exon
so has part: feature:1848303-1848432:1:exon
so has part: feature:1849388-1849629:1:exon
so has part: feature:1851035-1851219:1:exon
so has part: feature:1852556-1852642:1:exon
so has part: feature:1853856-1853979:1:exon
so has part: feature:1854386-1854577:1:exon
so has part: feature:1855728-1856067:1:exon
so has part: feature:1856800-1857530:1:exon
so has part: feature:1859631-1859825:1:exon
so has part: feature:1860974-1861066:1:exon
so has part: feature:1861477-1869122:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1785296-1785607:1:exon

position:1785607:1
position: 1785607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1792751-1792875:1:exon

position:1792751:1
position: 1792751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1792875:1
position: 1792875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1795200-1795305:1:exon

position:1795200:1
position: 1795200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1795305:1
position: 1795305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1795769-1795890:1:exon

position:1795769:1
position: 1795769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1795890:1
position: 1795890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1799272-1799431:1:exon

position:1799272:1
position: 1799272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1799431:1
position: 1799431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1820138-1820269:1:exon

position:1820138:1
position: 1820138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1820269:1
position: 1820269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1821434-1821541:1:exon

position:1821434:1
position: 1821434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1821541:1
position: 1821541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1823932-1824047:1:exon

position:1823932:1
position: 1823932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1824047:1
position: 1824047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1825441-1825503:1:exon

position:1825441:1
position: 1825441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1825503:1
position: 1825503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1826564-1826647:1:exon

position:1826564:1
position: 1826564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1826647:1
position: 1826647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1827720-1827781:1:exon

position:1827720:1
position: 1827720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1827781:1
position: 1827781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1828921-1829023:1:exon

position:1828921:1
position: 1828921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1829023:1
position: 1829023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1830852-1831014:1:exon

position:1830852:1
position: 1830852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition