Petromyzon marinus isolate kPetMar1 chromosome 24, kPetMar1.pri, whole genome shotgun sequence.
type: Entry
definition: Petromyzon marinus isolate kPetMar1 chromosome 24, kPetMar1.pri, whole genome shotgun sequence.
sequence version: NC_046092.1
sequence date: 2020-03-20
sequence: sequence
division: CON
label: NC_046092.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA611764
dblink: SAMN12629506
keyword: WGS
keyword: RefSeq
source: Petromyzon marinus (sea lamprey)
organism: Petromyzon marinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021464.1.\nAssembly name: kPetMar1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/24. The original whole-genome shotgun project has the\naccession JAAIYE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-DEC-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_dups v. github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n scaff10x v. 4.1.0; Bionano Solve DLS v.\n 3.2.1; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. smrtlink_6.0.0.47841;\n longranger align v. 2.2.2; freebayes\n Illumina polishing v. 1.3.1; gEVAL manual\n curation v. 2019-12-09; VGP assembly\n pipeline individual v. 1.6\nAssembly Name :: kPetMar1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 62.36x\nSequencing Technology :: PacBio Sequel I CLR; llumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Petromyzon marinus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 14075897
topology: linear
so has quality: SO_0000987
location: 1..14075897
location: region:1-14075897:1
RO_0002162: 7757

NC_046092
type: RefSeq
SIO_000068: refseq

PRJNA611764
type: BioProject
SIO_000068: bioproject

SAMN12629506
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14075897:1
position: 14075897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-14075897:1:source
so part of: sequence
organism: Petromyzon marinus
mol type: genomic DNA
isolate: kPetMar1
chromosome: 24
sex: male
tissue type: sperm
dev stage: adult
country: USA: Great Lakes Fisheries Commission
lat lon: 42.2821 N 83.74847 W
collection date: 12-Jun-2018
collected by: Jeremiah Smith

7757
type: Taxonomy
SIO_000068: taxonomy

NME6
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: NME6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(57253..72206)
location: region:57253-72206:-1
so has part: feature:57253-72206:-1:exon
subclass of: SO_0000010

116945460
type: Gene
SIO_000068: ncbigene

position:57253:-1
position: 57253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72206:-1
position: 72206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57253-72206:-1:exon

NME6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: NME6
product: NME/NM23 nucleoside diphosphate kinase 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_032959769.1
SIO_010081: NME6
subclass of: SO_0000673
so part of: NME6
location: complement(join(57253..57460,57944..58104,61183..61222,69332..69434,70587..70692,71941..72206))
location: region:57253-72206:-1
so has part: feature:71941-72206:-1:exon
so has part: feature:70587-70692:-1:exon
so has part: feature:69332-69434:-1:exon
so has part: feature:61183-61222:-1:exon
so has part: feature:57944-58104:-1:exon
so has part: feature:57253-57460:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71941-72206:-1:exon

position:71941:-1
position: 71941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:70587-70692:-1:exon

position:70587:-1
position: 70587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70692:-1
position: 70692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:69332-69434:-1:exon

position:69332:-1
position: 69332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69434:-1
position: 69434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:61183-61222:-1:exon

position:61183:-1
position: 61183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61222:-1
position: 61222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:57944-58104:-1:exon

position:57944:-1
position: 57944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58104:-1
position: 58104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:57253-57460:-1:exon

position:57460:-1
position: 57460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NME6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: NME6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoside diphosphate kinase 6
translation: MAGRGLQLTLALLKPDALAHGIAWEAVHQDVLKNKFLIVKSKELRLKRSDSERFYAAHKGKFFFQRLVEFMASGPIRVYVLAHHDAVRGWRELMGPTKVFRAVHTAPESIRACYGLTDTRNTTHGSDSSASALQEISFFFPEFDVACWCNTWEPAFRAGCVSYHPKLCVHLPLHA
SIO_010081: NME6
subclass of: SO_0000673
so part of: NME6
location: complement(join(57312..57460,57944..58104,61183..61222,69332..69434,70587..70661))
location: region:57312-70661:-1
so has part: feature:70587-70661:-1:exon
so has part: feature:69332-69434:-1:exon
so has part: feature:61183-61222:-1:exon
so has part: feature:57944-58104:-1:exon
so has part: feature:57312-57460:-1:exon

XP_032815660.1
type: Protein
SIO_000068: ncbiprotein

position:57312:-1
position: 57312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70661:-1
position: 70661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70587-70661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69332-69434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61183-61222:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:57944-58104:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:57312-57460:-1:exon

LOC116945461
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945461
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(80913..83402)
location: region:80913-83402:-1
so has part: feature:80913-83402:-1:exon
subclass of: SO_0000010

116945461
type: Gene
SIO_000068: ncbigene

position:80913:-1
position: 80913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83402:-1
position: 83402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80913-83402:-1:exon

LOC116945461
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945461
product: uncharacterized LOC116945461
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032959770.1
SIO_010081: LOC116945461
subclass of: SO_0000673
so part of: LOC116945461
location: complement(join(80913..82694,82867..83402))
location: region:80913-83402:-1
so has part: feature:82867-83402:-1:exon
so has part: feature:80913-82694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82867-83402:-1:exon

position:82867:-1
position: 82867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:80913-82694:-1:exon

position:82694:-1
position: 82694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945461
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945461
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116945461
translation: MNAAAVFPWDLLGPSPVGVEPLRAAALRLAPRPPPPDGGSGASPAAFPRHVGPQGGRGEKRKLRKALVEKDRRHRMNESFHELKQLMLRFCDGGAEAATKKQQQQAQACASQQQQQDRRLEKADVLEGAVAFIRSSILAVQDRGLEALTVQPQQPGAAALQQQLEAATKPPGAARTRVPTPASSPASPDLATAQVARGPHGCEQQQRRRHGRGGAVKVLKAELGVGVWRPW
SIO_010081: LOC116945461
subclass of: SO_0000673
so part of: LOC116945461
location: complement(join(82185..82694,82867..83052))
location: region:82185-83052:-1
so has part: feature:82867-83052:-1:exon
so has part: feature:82185-82694:-1:exon

XP_032815661.1
type: Protein
SIO_000068: ncbiprotein

position:82185:-1
position: 82185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83052:-1
position: 83052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82867-83052:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82185-82694:-1:exon

LOC116945462
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 97578..99447
location: region:97578-99447:1
so has part: feature:97578-99447:1:exon
subclass of: SO_0000010

116945462
type: Gene
SIO_000068: ncbigene

position:97578:1
position: 97578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99447:1
position: 99447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97578-99447:1:exon

LOC116945462
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945462
product: uncharacterized LOC116945462
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032959771.1
SIO_010081: LOC116945462
subclass of: SO_0000673
so part of: LOC116945462
location: join(97578..98302,98475..99447)
location: region:97578-99447:1
so has part: feature:97578-98302:1:exon
so has part: feature:98475-99447:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:97578-98302:1:exon

position:98302:1
position: 98302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:98475-99447:1:exon

position:98475:1
position: 98475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945462
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116945462
translation: MNAAAVFPWDLLGPSPVGVEPLRAAALRLAPRPPPPDGGSGASPAAFPRHVGPQRGRGEKRKLRKALVEKDRRHRMNESFHELKQLMLRLCDGGAEAATKKQQQQAQACASQQQQDRRLEKADVLEGAVAFIRSSILAVQDRGLDALTVQPQQPGVAALQQQLEAATKPPGAARTRVPTPASSPASPDLATEQVARGPHGCEQQQRQRHGRGGAVKVLKAELGVGVWRPW
SIO_010081: LOC116945462
subclass of: SO_0000673
so part of: LOC116945462
location: join(98117..98302,98475..98981)
location: region:98117-98981:1
so has part: feature:98117-98302:1:exon
so has part: feature:98475-98981:1:exon

XP_032815662.1
type: Protein
SIO_000068: ncbiprotein

position:98117:1
position: 98117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98981:1
position: 98981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98117-98302:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98475-98981:1:exon

RNF141
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: RNF141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 111363..157218
location: region:111363-157218:1
so has part: feature:111363-157218:1:exon
subclass of: SO_0000010

116945464
type: Gene
SIO_000068: ncbigene

position:111363:1
position: 111363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157218:1
position: 157218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111363-157218:1:exon

RNF141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: RNF141
product: ring finger protein 141, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_032959773.1
SIO_010081: RNF141
subclass of: SO_0000673
so part of: RNF141
location: join(111363..111513,133575..133757,138885..138993,141329..141538,143788..143891,144560..144667,155138..157218)
location: region:111363-157218:1
so has part: feature:111363-111513:1:exon
so has part: feature:133575-133757:1:exon
so has part: feature:138885-138993:1:exon
so has part: feature:141329-141538:1:exon
so has part: feature:143788-143891:1:exon
so has part: feature:144560-144667:1:exon
so has part: feature:155138-157218:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111363-111513:1:exon

position:111513:1
position: 111513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133575-133757:1:exon

position:133575:1
position: 133575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133757:1
position: 133757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:138885-138993:1:exon

position:138885:1
position: 138885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138993:1
position: 138993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:141329-141538:1:exon

position:141329:1
position: 141329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141538:1
position: 141538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:143788-143891:1:exon

position:143788:1
position: 143788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143891:1
position: 143891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:144560-144667:1:exon

position:144560:1
position: 144560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144667:1
position: 144667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:155138-157218:1:exon

position:155138:1
position: 155138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: RNF141
product: ring finger protein 141, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_032959774.1
SIO_010081: RNF141
subclass of: SO_0000673
so part of: RNF141
location: join(111363..111513,133575..133757,138885..138993,141329..141403,143788..143891,144560..144667,155138..157218)
location: region:111363-157218:1
so has part: feature:111363-111513:1:exon
so has part: feature:133575-133757:1:exon
so has part: feature:138885-138993:1:exon
so has part: feature:141329-141403:1:exon
so has part: feature:143788-143891:1:exon
so has part: feature:144560-144667:1:exon
so has part: feature:155138-157218:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111363-111513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133575-133757:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138885-138993:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141329-141403:1:exon

position:141403:1
position: 141403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:143788-143891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:144560-144667:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155138-157218:1:exon

RNF141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: RNF141
product: ring finger protein 141, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_032959775.1
SIO_010081: RNF141
subclass of: SO_0000673
so part of: RNF141
location: join(111363..111513,133575..133757,138885..138993,143788..143891,144560..144667,155138..157218)
location: region:111363-157218:1
so has part: feature:111363-111513:1:exon
so has part: feature:133575-133757:1:exon
so has part: feature:138885-138993:1:exon
so has part: feature:143788-143891:1:exon
so has part: feature:144560-144667:1:exon
so has part: feature:155138-157218:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111363-111513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133575-133757:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138885-138993:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:143788-143891:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144560-144667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:155138-157218:1:exon

RNF141
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 7757
gene: RNF141
product: ring finger protein 141, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XR_004403332.1
SIO_010081: RNF141
so part of: RNF141
location: join(111363..111513,133575..133757,138885..138993,141329..141538,143788..143891,144560..144667,154441..154589,155138..155254)
location: region:111363-155254:1
so has part: feature:111363-111513:1:exon
so has part: feature:133575-133757:1:exon
so has part: feature:138885-138993:1:exon
so has part: feature:141329-141538:1:exon
so has part: feature:143788-143891:1:exon
so has part: feature:144560-144667:1:exon
so has part: feature:154441-154589:1:exon
so has part: feature:155138-155254:1:exon

position:155254:1
position: 155254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111363-111513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133575-133757:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138885-138993:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141329-141538:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143788-143891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:144560-144667:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:154441-154589:1:exon

position:154441:1
position: 154441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154589:1
position: 154589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:155138-155254:1:exon

RNF141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: RNF141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 141 isoform X1
translation: MGQQVSQGGAARLSEKMLKQAWLLREIASLPYEDFLGRIGDINDTARRLTGGQDKHLLFEVQPGSDATPLWKITVRVLCTKVTRSTGLIEASRIMNLHQFTLLYHEVMGQAHCAAAMDAAAATAEPVPLRLPHLTSDLAPEQGIADAVKPMTEDAEDLSKAEEAGSIADCEMENGGACHASLWMGRIKQLTDEEECCICMDGRSDVILPCTHSFCHSCIDRWSGQNRNCPICRLKVEGPEESWLLPDAPTDEDVANYILTLADAAGTSHQP
SIO_010081: RNF141
subclass of: SO_0000673
so part of: RNF141
location: join(133624..133757,138885..138993,141329..141538,143788..143891,144560..144667,155138..155288)
location: region:133624-155288:1
so has part: feature:133624-133757:1:exon
so has part: feature:138885-138993:1:exon
so has part: feature:141329-141538:1:exon
so has part: feature:143788-143891:1:exon
so has part: feature:144560-144667:1:exon
so has part: feature:155138-155288:1:exon

XP_032815664.1
type: Protein
SIO_000068: ncbiprotein

position:133624:1
position: 133624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155288:1
position: 155288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133624-133757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138885-138993:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141329-141538:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:143788-143891:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144560-144667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:155138-155288:1:exon

RNF141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: RNF141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 141 isoform X2
translation: MGQQVSQGGAARLSEKMLKQAWLLREIASLPYEDFLGRIGDINDTARRLTGGQDKHLLFEVQPGSDATPLWKITVRVLCTKVTRSTGLIEASRIMNLHQFTLLYHETEDAEDLSKAEEAGSIADCEMENGGACHASLWMGRIKQLTDEEECCICMDGRSDVILPCTHSFCHSCIDRWSGQNRNCPICRLKVEGPEESWLLPDAPTDEDVANYILTLADAAGTSHQP
SIO_010081: RNF141
subclass of: SO_0000673
so part of: RNF141
location: join(133624..133757,138885..138993,141329..141403,143788..143891,144560..144667,155138..155288)
location: region:133624-155288:1
so has part: feature:133624-133757:1:exon
so has part: feature:138885-138993:1:exon
so has part: feature:141329-141403:1:exon
so has part: feature:143788-143891:1:exon
so has part: feature:144560-144667:1:exon
so has part: feature:155138-155288:1:exon

XP_032815665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133624-133757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138885-138993:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141329-141403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:143788-143891:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144560-144667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:155138-155288:1:exon

RNF141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: RNF141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 141 isoform X3
translation: MGQQVSQGGAARLSEKMLKQAWLLREIASLPYEDFLGRIGDINDTARRLTGGQDKHLLFEVQPGSDATPLWKITVRVLCTKTEDAEDLSKAEEAGSIADCEMENGGACHASLWMGRIKQLTDEEECCICMDGRSDVILPCTHSFCHSCIDRWSGQNRNCPICRLKVEGPEESWLLPDAPTDEDVANYILTLADAAGTSHQP
SIO_010081: RNF141
subclass of: SO_0000673
so part of: RNF141
location: join(133624..133757,138885..138993,143788..143891,144560..144667,155138..155288)
location: region:133624-155288:1
so has part: feature:133624-133757:1:exon
so has part: feature:138885-138993:1:exon
so has part: feature:143788-143891:1:exon
so has part: feature:144560-144667:1:exon
so has part: feature:155138-155288:1:exon

XP_032815666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133624-133757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138885-138993:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143788-143891:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144560-144667:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:155138-155288:1:exon

LOC116945463
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945463
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(157961..190401)
location: region:157961-190401:-1
so has part: feature:157961-190401:-1:exon
subclass of: SO_0000010

116945463
type: Gene
SIO_000068: ncbigene

position:157961:-1
position: 157961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190401:-1
position: 190401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157961-190401:-1:exon

LOC116945463
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945463
product: AMP deaminase 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032959772.1
SIO_010081: LOC116945463
subclass of: SO_0000673
so part of: LOC116945463
location: complement(join(157961..158575,160477..160587,165184..165357,166384..166504,167756..167919,175035..175161,175458..175621,176506..176637,177959..178153,179011..179140,180499..180715,181866..182031,183698..183962,185461..185695,190241..190401))
location: region:157961-190401:-1
so has part: feature:190241-190401:-1:exon
so has part: feature:185461-185695:-1:exon
so has part: feature:183698-183962:-1:exon
so has part: feature:181866-182031:-1:exon
so has part: feature:180499-180715:-1:exon
so has part: feature:179011-179140:-1:exon
so has part: feature:177959-178153:-1:exon
so has part: feature:176506-176637:-1:exon
so has part: feature:175458-175621:-1:exon
so has part: feature:175035-175161:-1:exon
so has part: feature:167756-167919:-1:exon
so has part: feature:166384-166504:-1:exon
so has part: feature:165184-165357:-1:exon
so has part: feature:160477-160587:-1:exon
so has part: feature:157961-158575:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190241-190401:-1:exon

position:190241:-1
position: 190241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185461-185695:-1:exon

position:185461:-1
position: 185461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185695:-1
position: 185695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:183698-183962:-1:exon

position:183698:-1
position: 183698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183962:-1
position: 183962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:181866-182031:-1:exon

position:181866:-1
position: 181866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182031:-1
position: 182031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:180499-180715:-1:exon

position:180499:-1
position: 180499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180715:-1
position: 180715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:179011-179140:-1:exon

position:179011:-1
position: 179011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179140:-1
position: 179140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:177959-178153:-1:exon

position:177959:-1
position: 177959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178153:-1
position: 178153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:176506-176637:-1:exon

position:176506:-1
position: 176506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176637:-1
position: 176637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:175458-175621:-1:exon

position:175458:-1
position: 175458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175621:-1
position: 175621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:175035-175161:-1:exon

position:175035:-1
position: 175035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175161:-1
position: 175161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:167756-167919:-1:exon

position:167756:-1
position: 167756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167919:-1
position: 167919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:166384-166504:-1:exon

position:166384:-1
position: 166384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166504:-1
position: 166504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:165184-165357:-1:exon

position:165184:-1
position: 165184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165357:-1
position: 165357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:160477-160587:-1:exon

position:160477:-1
position: 160477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160587:-1
position: 160587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:157961-158575:-1:exon

position:158575:-1
position: 158575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945463
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945463
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMP deaminase 1-like
translation: MFHSAGDEGVAREPHKAFPKAESQKLGQQMRARAEHIFASAFGAEDTKEEISIFDVPEHCPIGHREAKERQLLKESDPDVVGKRKKRLLRTHTISVTIVGADGVARPVSPSNFPHSPISPFPHSPVSSAAHSPGTSPHSPANDVPQMLAMQPAYSDVPDFQRMIVMGDYAAGVCLEDLAEAGQGLYRALLIREKYMRLSFQRFPCTTSRYLRTIEGEAWHDSDQVLPVFTAPPKKGEDPLSLEGIPGDLGYKVTSRDGVVHVSSGGAGDNEALHSLPYLDIDTFIDDMNFLLTLIADGPTKTFCHRRLNFLGSKFNLHEMLNEMAEMKELKEVAHRDFYNVRKVDTHIHAAACMNQKHLLRFIKHSYLVDPERVVRVKDGVPVTLRQLFESLKLHPNDLTVDSLDVHAGRQTFHRFDKFNSKYNPVGASELRDLYIKTDNHIKGEYFATIIKEVASDLEESRYQHAEPRLSVYGSKRDEWHKLADWFIQHRVYSPNLKWMIQMPRIYDIFRAKNLVLNFGTMLDNIFLPLFEATINPNQHKHLHVFLKHVTGFDSVDDESKHSGHMFSSKSPKPQEWDVQKNPSYTYYMYYMYANVMVLNNLRRERGMNTFLFRPHCGEAGAVTHLLAAFMLADNISHGLNLKKSPVLQYLYYLAQLPIAMSPLSNNSLFLEYAKNPLLEFLQKGLCISLSTDDPMQFHFTKEPLMEEYAIAAQVFKLSTCDMCEIARNSVLQSAYSHEEKKHFLGNNYLQDGPAGNNILKTNVAHIRLAYRYETWCYELDLIMDAMKATSE
SIO_010081: LOC116945463
subclass of: SO_0000673
so part of: LOC116945463
location: complement(join(158414..158575,160477..160587,165184..165357,166384..166504,167756..167919,175035..175161,175458..175621,176506..176637,177959..178153,179011..179140,180499..180715,181866..182031,183698..183962,185461..185695,190241..190256))
location: region:158414-190256:-1
so has part: feature:190241-190256:-1:exon
so has part: feature:185461-185695:-1:exon
so has part: feature:183698-183962:-1:exon
so has part: feature:181866-182031:-1:exon
so has part: feature:180499-180715:-1:exon
so has part: feature:179011-179140:-1:exon
so has part: feature:177959-178153:-1:exon
so has part: feature:176506-176637:-1:exon
so has part: feature:175458-175621:-1:exon
so has part: feature:175035-175161:-1:exon
so has part: feature:167756-167919:-1:exon
so has part: feature:166384-166504:-1:exon
so has part: feature:165184-165357:-1:exon
so has part: feature:160477-160587:-1:exon
so has part: feature:158414-158575:-1:exon

XP_032815663.1
type: Protein
SIO_000068: ncbiprotein

position:158414:-1
position: 158414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190256:-1
position: 190256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190241-190256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185461-185695:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183698-183962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:181866-182031:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180499-180715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:179011-179140:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:177959-178153:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176506-176637:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:175458-175621:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:175035-175161:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:167756-167919:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:166384-166504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:165184-165357:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:160477-160587:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:158414-158575:-1:exon

LOC116945466
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(205732..251258)
location: region:205732-251258:-1
so has part: feature:205732-251258:-1:exon
subclass of: SO_0000010

116945466
type: Gene
SIO_000068: ncbigene

position:205732:-1
position: 205732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251258:-1
position: 251258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205732-251258:-1:exon

LOC116945466
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945466
product: GTPase HRas-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 127 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032959784.1
SIO_010081: LOC116945466
subclass of: SO_0000673
so part of: LOC116945466
location: complement(join(205732..213690,214782..214904,218365..218524,219692..219870,220565..220720,250152..250380))
location: region:205732-250380:-1
so has part: feature:250152-250380:-1:exon
so has part: feature:220565-220720:-1:exon
so has part: feature:219692-219870:-1:exon
so has part: feature:218365-218524:-1:exon
so has part: feature:214782-214904:-1:exon
so has part: feature:205732-213690:-1:exon

position:250380:-1
position: 250380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250152-250380:-1:exon

position:250152:-1
position: 250152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:220565-220720:-1:exon

position:220565:-1
position: 220565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220720:-1
position: 220720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:219692-219870:-1:exon

position:219692:-1
position: 219692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219870:-1
position: 219870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:218365-218524:-1:exon

position:218365:-1
position: 218365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218524:-1
position: 218524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:214782-214904:-1:exon

position:214782:-1
position: 214782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214904:-1
position: 214904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:205732-213690:-1:exon

position:213690:-1
position: 213690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945466
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945466
product: GTPase HRas-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 125 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_032959782.1
SIO_010081: LOC116945466
subclass of: SO_0000673
so part of: LOC116945466
location: complement(join(205886..213690,214782..214904,218365..218524,219692..219870,220565..220720,229521..229646,250402..250529,251150..251258))
location: region:205886-251258:-1
so has part: feature:251150-251258:-1:exon
so has part: feature:250402-250529:-1:exon
so has part: feature:229521-229646:-1:exon
so has part: feature:220565-220720:-1:exon
so has part: feature:219692-219870:-1:exon
so has part: feature:218365-218524:-1:exon
so has part: feature:214782-214904:-1:exon
so has part: feature:205886-213690:-1:exon

position:205886:-1
position: 205886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251150-251258:-1:exon

position:251150:-1
position: 251150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:250402-250529:-1:exon

position:250402:-1
position: 250402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250529:-1
position: 250529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:229521-229646:-1:exon

position:229521:-1
position: 229521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229646:-1
position: 229646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:220565-220720:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219692-219870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:218365-218524:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:214782-214904:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205886-213690:-1:exon

LOC116945466
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945466
product: GTPase HRas-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 125 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_032959783.1
SIO_010081: LOC116945466
subclass of: SO_0000673
so part of: LOC116945466
location: complement(join(205886..213690,214782..214904,218365..218524,219692..219870,220565..220720,250402..250545))
location: region:205886-250545:-1
so has part: feature:250402-250545:-1:exon
so has part: feature:220565-220720:-1:exon
so has part: feature:219692-219870:-1:exon
so has part: feature:218365-218524:-1:exon
so has part: feature:214782-214904:-1:exon
so has part: feature:205886-213690:-1:exon

position:250545:-1
position: 250545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250402-250545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220565-220720:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:219692-219870:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218365-218524:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214782-214904:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205886-213690:-1:exon

LOC116945466
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945466
product: GTPase HRas-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 125 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_032959781.1
SIO_010081: LOC116945466
subclass of: SO_0000673
so part of: LOC116945466
location: complement(join(205886..213690,214782..214904,218365..218524,219692..219870,220565..220720,229521..229646,250402..250545))
location: region:205886-250545:-1
so has part: feature:250402-250545:-1:exon
so has part: feature:229521-229646:-1:exon
so has part: feature:220565-220720:-1:exon
so has part: feature:219692-219870:-1:exon
so has part: feature:218365-218524:-1:exon
so has part: feature:214782-214904:-1:exon
so has part: feature:205886-213690:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250402-250545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:229521-229646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:220565-220720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219692-219870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218365-218524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:214782-214904:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205886-213690:-1:exon

LOC116945466
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase HRas-like
translation: MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDSETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLPARTVDTKQAQDLARSYGIPYVETSAKTRQGVEDAFYTLVREIRDHKLRKMNNANNKDECSVCSCVLS
SIO_010081: LOC116945466
subclass of: SO_0000673
so part of: LOC116945466
location: complement(join(214788..214904,218365..218524,219692..219870,220565..220675))
location: region:214788-220675:-1
so has part: feature:220565-220675:-1:exon
so has part: feature:219692-219870:-1:exon
so has part: feature:218365-218524:-1:exon
so has part: feature:214788-214904:-1:exon

XP_032815672.1
type: Protein
SIO_000068: ncbiprotein

position:214788:-1
position: 214788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220675:-1
position: 220675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220565-220675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219692-219870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218365-218524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214788-214904:-1:exon

LOC116945466
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase HRas-like
translation: MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDSETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLPARTVDTKQAQDLARSYGIPYVETSAKTRQGVEDAFYTLVREIRDHKLRKMNNANNKDECSVCSCVLS
SIO_010081: LOC116945466
subclass of: SO_0000673
so part of: LOC116945466
location: complement(join(214788..214904,218365..218524,219692..219870,220565..220675))
location: region:214788-220675:-1
so has part: feature:220565-220675:-1:exon
so has part: feature:219692-219870:-1:exon
so has part: feature:218365-218524:-1:exon
so has part: feature:214788-214904:-1:exon

XP_032815673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220565-220675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219692-219870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218365-218524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214788-214904:-1:exon

LOC116945466
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase HRas-like
translation: MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDSETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLPARTVDTKQAQDLARSYGIPYVETSAKTRQGVEDAFYTLVREIRDHKLRKMNNANNKDECSVCSCVLS
SIO_010081: LOC116945466
subclass of: SO_0000673
so part of: LOC116945466
location: complement(join(214788..214904,218365..218524,219692..219870,220565..220675))
location: region:214788-220675:-1
so has part: feature:220565-220675:-1:exon
so has part: feature:219692-219870:-1:exon
so has part: feature:218365-218524:-1:exon
so has part: feature:214788-214904:-1:exon

XP_032815674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220565-220675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219692-219870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218365-218524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214788-214904:-1:exon

LOC116945466
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase HRas-like
translation: MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDSETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLPARTVDTKQAQDLARSYGIPYVETSAKTRQGVEDAFYTLVREIRDHKLRKMNNANNKDECSVCSCVLS
SIO_010081: LOC116945466
subclass of: SO_0000673
so part of: LOC116945466
location: complement(join(214788..214904,218365..218524,219692..219870,220565..220675))
location: region:214788-220675:-1
so has part: feature:220565-220675:-1:exon
so has part: feature:219692-219870:-1:exon
so has part: feature:218365-218524:-1:exon
so has part: feature:214788-214904:-1:exon

XP_032815675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220565-220675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219692-219870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218365-218524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214788-214904:-1:exon

LRRC56
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LRRC56
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 251562..318815
location: region:251562-318815:1
so has part: feature:251562-318815:1:exon
subclass of: SO_0000010

116945465
type: Gene
SIO_000068: ncbigene

position:251562:1
position: 251562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318815:1
position: 318815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251562-318815:1:exon

LRRC56
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LRRC56
product: leucine rich repeat containing 56, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_032959777.1
SIO_010081: LRRC56
subclass of: SO_0000673
so part of: LRRC56
location: join(251562..251765,254530..254701,276626..276713,279143..279203,281015..281111,288408..288605,291111..291294,293402..293623,306417..306481,309196..309407,310655..310863,311092..311304,316587..316800,317521..318815)
location: region:251562-318815:1
so has part: feature:251562-251765:1:exon
so has part: feature:254530-254701:1:exon
so has part: feature:276626-276713:1:exon
so has part: feature:279143-279203:1:exon
so has part: feature:281015-281111:1:exon
so has part: feature:288408-288605:1:exon
so has part: feature:291111-291294:1:exon
so has part: feature:293402-293623:1:exon
so has part: feature:306417-306481:1:exon
so has part: feature:309196-309407:1:exon
so has part: feature:310655-310863:1:exon
so has part: feature:311092-311304:1:exon
so has part: feature:316587-316800:1:exon
so has part: feature:317521-318815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:251562-251765:1:exon

position:251765:1
position: 251765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:254530-254701:1:exon

position:254530:1
position: 254530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254701:1
position: 254701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:276626-276713:1:exon

position:276626:1
position: 276626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276713:1
position: 276713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:279143-279203:1:exon

position:279143:1
position: 279143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279203:1
position: 279203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:281015-281111:1:exon

position:281015:1
position: 281015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281111:1
position: 281111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:288408-288605:1:exon

position:288408:1
position: 288408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288605:1
position: 288605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:291111-291294:1:exon

position:291111:1
position: 291111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291294:1
position: 291294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:293402-293623:1:exon

position:293402:1
position: 293402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293623:1
position: 293623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:306417-306481:1:exon

position:306417:1
position: 306417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306481:1
position: 306481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:309196-309407:1:exon

position:309196:1
position: 309196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309407:1
position: 309407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:310655-310863:1:exon

position:310655:1
position: 310655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310863:1
position: 310863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:311092-311304:1:exon

position:311092:1
position: 311092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311304:1
position: 311304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:316587-316800:1:exon

position:316587:1
position: 316587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316800:1
position: 316800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:317521-318815:1:exon

position:317521:1
position: 317521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LRRC56
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LRRC56
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 56 isoform X1
translation: MTSRRRDGVTSSRDASMDACSRSAPLSRQPGSARVWIVDDRSGSAGEVNPDPLCAASLEPVEAAVECFTPTHLQALTGQENLQEVSTLEMCVDTRESSLGNFGAHLPGLLHLKLNNSTISCIRDLGGSLRHLQVLWMCRCSLVDLHGLSSLPSLRELYIAYNGAHELGPLSLLEELEVLDLEGNGVEDMAQVHALALCPHLACLTLEGNPVCSRASPNAPQDPSYEYRRAVLDLLPQLSVLDDRPANERHALPAAATTGTDWLLVRDAIVDDATTLCLGHGLGGRESPVSPLGRPGTARPRSARPRSACASLLWGNEGGPTRPRTAILQDSVGSRPQTPASRVSSPHSDDASDLTHGGSGVICGNPVKALRARRNKLNTTSSEAVSKQETAEPSSRDGTRSPGDSATMAGALPALCHIPDPPDSRPSPLCAFEQDVLLALSAWREEFSRNMKTFAQKHEPQVLSITYGGDVKRSSSRSNRSSIGEAEGDQQDSVSGEDSVSEGGSDRGVSPAPLCPLGGSDLSPTSSLAARVSVGTSKFPSPPTLHRHPRLPPNRQLVALRMPGARRSFSRDASIPNAALYAKNAPSATGRVTVSDKCRVTSTTQAGAAFPRTPQPQSLSALPLQPATSPPAKQFGVVVPRHTGEPLTLVDSGTRSTHTIRSLSSVYTPLAAVRGMHRPVVRGGGQESRGDTRVRTGDPPHPPGQRVFRLGGARLTPLLPSKAQLPTGH
SIO_010081: LRRC56
subclass of: SO_0000673
so part of: LRRC56
location: join(251719..251765,254530..254701,276626..276713,279143..279203,281015..281111,288408..288605,291111..291294,293402..293623,306417..306481,309196..309407,310655..310863,311092..311304,316587..316800,317521..317728)
location: region:251719-317728:1
so has part: feature:251719-251765:1:exon
so has part: feature:254530-254701:1:exon
so has part: feature:276626-276713:1:exon
so has part: feature:279143-279203:1:exon
so has part: feature:281015-281111:1:exon
so has part: feature:288408-288605:1:exon
so has part: feature:291111-291294:1:exon
so has part: feature:293402-293623:1:exon
so has part: feature:306417-306481:1:exon
so has part: feature:309196-309407:1:exon
so has part: feature:310655-310863:1:exon
so has part: feature:311092-311304:1:exon
so has part: feature:316587-316800:1:exon
so has part: feature:317521-317728:1:exon

XP_032815668.1
type: Protein
SIO_000068: ncbiprotein

position:251719:1
position: 251719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317728:1
position: 317728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251719-251765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254530-254701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276626-276713:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279143-279203:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281015-281111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:288408-288605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291111-291294:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:293402-293623:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:306417-306481:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:309196-309407:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310655-310863:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:311092-311304:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:316587-316800:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:317521-317728:1:exon

LRRC56
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LRRC56
product: leucine rich repeat containing 56, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_032959778.1
SIO_010081: LRRC56
subclass of: SO_0000673
so part of: LRRC56
location: join(253017..253327,254530..254701,276626..276713,279143..279203,281015..281111,288408..288605,291111..291294,293402..293623,306417..306481,309196..309407,310655..310863,311092..311304,316587..316800,317521..318815)
location: region:253017-318815:1
so has part: feature:253017-253327:1:exon
so has part: feature:254530-254701:1:exon
so has part: feature:276626-276713:1:exon
so has part: feature:279143-279203:1:exon
so has part: feature:281015-281111:1:exon
so has part: feature:288408-288605:1:exon
so has part: feature:291111-291294:1:exon
so has part: feature:293402-293623:1:exon
so has part: feature:306417-306481:1:exon
so has part: feature:309196-309407:1:exon
so has part: feature:310655-310863:1:exon
so has part: feature:311092-311304:1:exon
so has part: feature:316587-316800:1:exon
so has part: feature:317521-318815:1:exon

position:253017:1
position: 253017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253017-253327:1:exon

position:253327:1
position: 253327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:254530-254701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276626-276713:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279143-279203:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281015-281111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:288408-288605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291111-291294:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:293402-293623:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:306417-306481:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:309196-309407:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310655-310863:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:311092-311304:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:316587-316800:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:317521-318815:1:exon

LRRC56
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LRRC56
product: leucine rich repeat containing 56, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032959780.1
SIO_010081: LRRC56
subclass of: SO_0000673
so part of: LRRC56
location: join(253339..254701,259928..260045,276626..276713,279143..279203,281015..281111,288408..288605,291111..291294,293402..293623,306417..306481,309196..309407,310655..310863,311092..311304,316587..316800,317521..318815)
location: region:253339-318815:1
so has part: feature:253339-254701:1:exon
so has part: feature:259928-260045:1:exon
so has part: feature:276626-276713:1:exon
so has part: feature:279143-279203:1:exon
so has part: feature:281015-281111:1:exon
so has part: feature:288408-288605:1:exon
so has part: feature:291111-291294:1:exon
so has part: feature:293402-293623:1:exon
so has part: feature:306417-306481:1:exon
so has part: feature:309196-309407:1:exon
so has part: feature:310655-310863:1:exon
so has part: feature:311092-311304:1:exon
so has part: feature:316587-316800:1:exon
so has part: feature:317521-318815:1:exon

position:253339:1
position: 253339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253339-254701:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:259928-260045:1:exon

position:259928:1
position: 259928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260045:1
position: 260045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:276626-276713:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279143-279203:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281015-281111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:288408-288605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291111-291294:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:293402-293623:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:306417-306481:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:309196-309407:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310655-310863:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:311092-311304:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:316587-316800:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:317521-318815:1:exon

LRRC56
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LRRC56
product: leucine rich repeat containing 56, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032959779.1
SIO_010081: LRRC56
subclass of: SO_0000673
so part of: LRRC56
location: join(253339..254701,265220..265478,276626..276713,279143..279203,281015..281111,288408..288605,291111..291294,293402..293623,306417..306481,309196..309407,310655..310863,311092..311304,316587..316800,317521..318815)
location: region:253339-318815:1
so has part: feature:253339-254701:1:exon
so has part: feature:265220-265478:1:exon
so has part: feature:276626-276713:1:exon
so has part: feature:279143-279203:1:exon
so has part: feature:281015-281111:1:exon
so has part: feature:288408-288605:1:exon
so has part: feature:291111-291294:1:exon
so has part: feature:293402-293623:1:exon
so has part: feature:306417-306481:1:exon
so has part: feature:309196-309407:1:exon
so has part: feature:310655-310863:1:exon
so has part: feature:311092-311304:1:exon
so has part: feature:316587-316800:1:exon
so has part: feature:317521-318815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:253339-254701:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265220-265478:1:exon

position:265220:1
position: 265220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265478:1
position: 265478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:276626-276713:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279143-279203:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281015-281111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:288408-288605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291111-291294:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:293402-293623:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:306417-306481:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:309196-309407:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310655-310863:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:311092-311304:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:316587-316800:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:317521-318815:1:exon

LRRC56
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LRRC56
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 56 isoform X2
translation: MDACSRSAPLSRQPGSARVWIVDDRSGSAGEVNPDPLCAASLEPVEAAVECFTPTHLQALTGQENLQEVSTLEMCVDTRESSLGNFGAHLPGLLHLKLNNSTISCIRDLGGSLRHLQVLWMCRCSLVDLHGLSSLPSLRELYIAYNGAHELGPLSLLEELEVLDLEGNGVEDMAQVHALALCPHLACLTLEGNPVCSRASPNAPQDPSYEYRRAVLDLLPQLSVLDDRPANERHALPAAATTGTDWLLVRDAIVDDATTLCLGHGLGGRESPVSPLGRPGTARPRSARPRSACASLLWGNEGGPTRPRTAILQDSVGSRPQTPASRVSSPHSDDASDLTHGGSGVICGNPVKALRARRNKLNTTSSEAVSKQETAEPSSRDGTRSPGDSATMAGALPALCHIPDPPDSRPSPLCAFEQDVLLALSAWREEFSRNMKTFAQKHEPQVLSITYGGDVKRSSSRSNRSSIGEAEGDQQDSVSGEDSVSEGGSDRGVSPAPLCPLGGSDLSPTSSLAARVSVGTSKFPSPPTLHRHPRLPPNRQLVALRMPGARRSFSRDASIPNAALYAKNAPSATGRVTVSDKCRVTSTTQAGAAFPRTPQPQSLSALPLQPATSPPAKQFGVVVPRHTGEPLTLVDSGTRSTHTIRSLSSVYTPLAAVRGMHRPVVRGGGQESRGDTRVRTGDPPHPPGQRVFRLGGARLTPLLPSKAQLPTGH
SIO_010081: LRRC56
subclass of: SO_0000673
so part of: LRRC56
location: join(254531..254701,276626..276713,279143..279203,281015..281111,288408..288605,291111..291294,293402..293623,306417..306481,309196..309407,310655..310863,311092..311304,316587..316800,317521..317728)
location: region:254531-317728:1
so has part: feature:254531-254701:1:exon
so has part: feature:276626-276713:1:exon
so has part: feature:279143-279203:1:exon
so has part: feature:281015-281111:1:exon
so has part: feature:288408-288605:1:exon
so has part: feature:291111-291294:1:exon
so has part: feature:293402-293623:1:exon
so has part: feature:306417-306481:1:exon
so has part: feature:309196-309407:1:exon
so has part: feature:310655-310863:1:exon
so has part: feature:311092-311304:1:exon
so has part: feature:316587-316800:1:exon
so has part: feature:317521-317728:1:exon

XP_032815669.1
type: Protein
SIO_000068: ncbiprotein

position:254531:1
position: 254531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254531-254701:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276626-276713:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279143-279203:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:281015-281111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288408-288605:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291111-291294:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:293402-293623:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306417-306481:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:309196-309407:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310655-310863:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:311092-311304:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:316587-316800:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317521-317728:1:exon

LRRC56
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LRRC56
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 56 isoform X3
translation: MRCRARQALTGQENLQEVSTLEMCVDTRESSLGNFGAHLPGLLHLKLNNSTISCIRDLGGSLRHLQVLWMCRCSLVDLHGLSSLPSLRELYIAYNGAHELGPLSLLEELEVLDLEGNGVEDMAQVHALALCPHLACLTLEGNPVCSRASPNAPQDPSYEYRRAVLDLLPQLSVLDDRPANERHALPAAATTGTDWLLVRDAIVDDATTLCLGHGLGGRESPVSPLGRPGTARPRSARPRSACASLLWGNEGGPTRPRTAILQDSVGSRPQTPASRVSSPHSDDASDLTHGGSGVICGNPVKALRARRNKLNTTSSEAVSKQETAEPSSRDGTRSPGDSATMAGALPALCHIPDPPDSRPSPLCAFEQDVLLALSAWREEFSRNMKTFAQKHEPQVLSITYGGDVKRSSSRSNRSSIGEAEGDQQDSVSGEDSVSEGGSDRGVSPAPLCPLGGSDLSPTSSLAARVSVGTSKFPSPPTLHRHPRLPPNRQLVALRMPGARRSFSRDASIPNAALYAKNAPSATGRVTVSDKCRVTSTTQAGAAFPRTPQPQSLSALPLQPATSPPAKQFGVVVPRHTGEPLTLVDSGTRSTHTIRSLSSVYTPLAAVRGMHRPVVRGGGQESRGDTRVRTGDPPHPPGQRVFRLGGARLTPLLPSKAQLPTGH
SIO_010081: LRRC56
subclass of: SO_0000673
so part of: LRRC56
location: join(265461..265478,276626..276713,279143..279203,281015..281111,288408..288605,291111..291294,293402..293623,306417..306481,309196..309407,310655..310863,311092..311304,316587..316800,317521..317728)
location: region:265461-317728:1
so has part: feature:265461-265478:1:exon
so has part: feature:276626-276713:1:exon
so has part: feature:279143-279203:1:exon
so has part: feature:281015-281111:1:exon
so has part: feature:288408-288605:1:exon
so has part: feature:291111-291294:1:exon
so has part: feature:293402-293623:1:exon
so has part: feature:306417-306481:1:exon
so has part: feature:309196-309407:1:exon
so has part: feature:310655-310863:1:exon
so has part: feature:311092-311304:1:exon
so has part: feature:316587-316800:1:exon
so has part: feature:317521-317728:1:exon

XP_032815670.1
type: Protein
SIO_000068: ncbiprotein

position:265461:1
position: 265461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265461-265478:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276626-276713:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279143-279203:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:281015-281111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288408-288605:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291111-291294:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:293402-293623:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306417-306481:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:309196-309407:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310655-310863:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:311092-311304:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:316587-316800:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317521-317728:1:exon

LRRC56
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LRRC56
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 56 isoform X4
translation: MCVDTRESSLGNFGAHLPGLLHLKLNNSTISCIRDLGGSLRHLQVLWMCRCSLVDLHGLSSLPSLRELYIAYNGAHELGPLSLLEELEVLDLEGNGVEDMAQVHALALCPHLACLTLEGNPVCSRASPNAPQDPSYEYRRAVLDLLPQLSVLDDRPANERHALPAAATTGTDWLLVRDAIVDDATTLCLGHGLGGRESPVSPLGRPGTARPRSARPRSACASLLWGNEGGPTRPRTAILQDSVGSRPQTPASRVSSPHSDDASDLTHGGSGVICGNPVKALRARRNKLNTTSSEAVSKQETAEPSSRDGTRSPGDSATMAGALPALCHIPDPPDSRPSPLCAFEQDVLLALSAWREEFSRNMKTFAQKHEPQVLSITYGGDVKRSSSRSNRSSIGEAEGDQQDSVSGEDSVSEGGSDRGVSPAPLCPLGGSDLSPTSSLAARVSVGTSKFPSPPTLHRHPRLPPNRQLVALRMPGARRSFSRDASIPNAALYAKNAPSATGRVTVSDKCRVTSTTQAGAAFPRTPQPQSLSALPLQPATSPPAKQFGVVVPRHTGEPLTLVDSGTRSTHTIRSLSSVYTPLAAVRGMHRPVVRGGGQESRGDTRVRTGDPPHPPGQRVFRLGGARLTPLLPSKAQLPTGH
SIO_010081: LRRC56
subclass of: SO_0000673
so part of: LRRC56
location: join(276674..276713,279143..279203,281015..281111,288408..288605,291111..291294,293402..293623,306417..306481,309196..309407,310655..310863,311092..311304,316587..316800,317521..317728)
location: region:276674-317728:1
so has part: feature:276674-276713:1:exon
so has part: feature:279143-279203:1:exon
so has part: feature:281015-281111:1:exon
so has part: feature:288408-288605:1:exon
so has part: feature:291111-291294:1:exon
so has part: feature:293402-293623:1:exon
so has part: feature:306417-306481:1:exon
so has part: feature:309196-309407:1:exon
so has part: feature:310655-310863:1:exon
so has part: feature:311092-311304:1:exon
so has part: feature:316587-316800:1:exon
so has part: feature:317521-317728:1:exon

XP_032815671.1
type: Protein
SIO_000068: ncbiprotein

position:276674:1
position: 276674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276674-276713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279143-279203:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:281015-281111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288408-288605:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:291111-291294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293402-293623:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306417-306481:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:309196-309407:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310655-310863:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:311092-311304:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:316587-316800:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:317521-317728:1:exon

LOC116945467
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945467
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(352061..384063)
location: region:352061-384063:-1
so has part: feature:352061-384063:-1:exon
subclass of: SO_0000010

116945467
type: Gene
SIO_000068: ncbigene

position:352061:-1
position: 352061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384063:-1
position: 384063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352061-384063:-1:exon

LOC116945467
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945467
product: lamin-B2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032959785.1
SIO_010081: LOC116945467
subclass of: SO_0000673
so part of: LOC116945467
location: complement(join(352061..353507,356522..356694,357846..357965,363448..363652,365079..365259,368897..369069,371044..371120,373287..373388,373570..373704,383321..384063))
location: region:352061-384063:-1
so has part: feature:383321-384063:-1:exon
so has part: feature:373570-373704:-1:exon
so has part: feature:373287-373388:-1:exon
so has part: feature:371044-371120:-1:exon
so has part: feature:368897-369069:-1:exon
so has part: feature:365079-365259:-1:exon
so has part: feature:363448-363652:-1:exon
so has part: feature:357846-357965:-1:exon
so has part: feature:356522-356694:-1:exon
so has part: feature:352061-353507:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:383321-384063:-1:exon

position:383321:-1
position: 383321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:373570-373704:-1:exon

position:373570:-1
position: 373570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373704:-1
position: 373704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:373287-373388:-1:exon

position:373287:-1
position: 373287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373388:-1
position: 373388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:371044-371120:-1:exon

position:371044:-1
position: 371044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371120:-1
position: 371120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:368897-369069:-1:exon

position:368897:-1
position: 368897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369069:-1
position: 369069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:365079-365259:-1:exon

position:365079:-1
position: 365079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365259:-1
position: 365259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:363448-363652:-1:exon

position:363448:-1
position: 363448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363652:-1
position: 363652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:357846-357965:-1:exon

position:357846:-1
position: 357846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357965:-1
position: 357965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:356522-356694:-1:exon

position:356522:-1
position: 356522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356694:-1
position: 356694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:352061-353507:-1:exon

position:353507:-1
position: 353507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945467
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945467
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lamin-B2-like
translation: MDEAGSVLSETQSTRNVETSRRDALEQQCAGHTRRKVLAQRAHSARASEERLCQVEAERDALGARLREAELQTEALSCSLLQQEEERRFQSTMVEEERQGNRAREQQLEMRVQALRDLLLVQAVEVEAARESLAHSPLRILVPEFGLSVPTRATSASVSYSRFRLTREHPCGPPLQASVSTGGPRTGCPRDAASTPGWPSKRAATRRPLTMPALAEAPAAPWGSLLRRDGDATRGEGGGVESGASAPAHPNSKFPWSWLQVVEVGPSGRFVQVLNSSARHSEELGGCLLQQLQTGGGGGCQPRGTPIAIYRFPHELRLPPGVAITVWAGASGVSACPPTDLLWAEWPRFKTGSHIATALCRPNGQLITWHCAQRRPASCVEGTSPRGLVPSTQEAPAAQILGVDAIGSEKQRDEPRSTEAARRAAPRSARATTATMAVPPLRAQTPQGRH
SIO_010081: LOC116945467
subclass of: SO_0000673
so part of: LOC116945467
location: complement(join(353423..353507,356522..356694,357846..357965,363448..363652,365079..365259,368897..369069,371044..371120,373287..373388,373570..373704,383321..383422))
location: region:353423-383422:-1
so has part: feature:383321-383422:-1:exon
so has part: feature:373570-373704:-1:exon
so has part: feature:373287-373388:-1:exon
so has part: feature:371044-371120:-1:exon
so has part: feature:368897-369069:-1:exon
so has part: feature:365079-365259:-1:exon
so has part: feature:363448-363652:-1:exon
so has part: feature:357846-357965:-1:exon
so has part: feature:356522-356694:-1:exon
so has part: feature:353423-353507:-1:exon

XP_032815676.1
type: Protein
SIO_000068: ncbiprotein

position:353423:-1
position: 353423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383422:-1
position: 383422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383321-383422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373570-373704:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373287-373388:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:371044-371120:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:368897-369069:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:365079-365259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:363448-363652:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357846-357965:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356522-356694:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:353423-353507:-1:exon

LOC116945468
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945468
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 500205..533603
location: region:500205-533603:1
so has part: feature:500205-533603:1:exon
subclass of: SO_0000010

116945468
type: Gene
SIO_000068: ncbigene

position:500205:1
position: 500205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533603:1
position: 533603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500205-533603:1:exon

LOC116945468
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945468
product: ras association domain-containing protein 8-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032959787.1
SIO_010081: LOC116945468
subclass of: SO_0000673
so part of: LOC116945468
location: join(500205..500536,528155..528539,529081..530021,530795..530933,531679..533603)
location: region:500205-533603:1
so has part: feature:500205-500536:1:exon
so has part: feature:528155-528539:1:exon
so has part: feature:529081-530021:1:exon
so has part: feature:530795-530933:1:exon
so has part: feature:531679-533603:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:500205-500536:1:exon

position:500536:1
position: 500536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:528155-528539:1:exon

position:528155:1
position: 528155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528539:1
position: 528539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:529081-530021:1:exon

position:529081:1
position: 529081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530021:1
position: 530021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:530795-530933:1:exon

position:530795:1
position: 530795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530933:1
position: 530933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:531679-533603:1:exon

position:531679:1
position: 531679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945468
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945468
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras association domain-containing protein 8-like
translation: MELKVWVEGVPRVVCGVTDATTCHDVVIALAQALGRTGRYTLIERWRDTERHLCPGESLAAALAAWGQHSADVQLLLRRTGPGREQDPGPGRAFPHQSLPHQGRPRPAEAGARATVVAPEPESDSLRRREVMRKSLTFTPGIRKLLEKAGGGRGHGEPAGGPGAPAPPARPDELKRLVRLQNERLRDVETRIDASDAELRRWEERDARSVGADDEDDDDDDDGREDGGAVAAVAKEAAQLEAEIARNEREEAALEAEWRRETEREAELAQRLSEARERARTAGEAARHRTEEARRLEAEVAAVQQRGAERGAADLRARLAEVEREARSLDGSLVVVHCSLEEAARSLRDKEGEAERLGRELRQLHLQQFIAQTGSRVTVLSEPPDDATAVAVDAGSVSREPRLVPPAPHVLHTSLLSSFNPESIYV
SIO_010081: LOC116945468
subclass of: SO_0000673
so part of: LOC116945468
location: join(528437..528539,529081..530021,530795..530933,531679..531776)
location: region:528437-531776:1
so has part: feature:528437-528539:1:exon
so has part: feature:529081-530021:1:exon
so has part: feature:530795-530933:1:exon
so has part: feature:531679-531776:1:exon

XP_032815678.1
type: Protein
SIO_000068: ncbiprotein

position:528437:1
position: 528437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531776:1
position: 531776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528437-528539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529081-530021:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:530795-530933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:531679-531776:1:exon

LOC116945469
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 581151..621410
location: region:581151-621410:1
so has part: feature:581151-621410:1:exon
subclass of: SO_0000010

116945469
type: Gene
SIO_000068: ncbigene

position:581151:1
position: 581151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621410:1
position: 621410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581151-621410:1:exon

LOC116945469
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945469
product: PHD and RING finger domain-containing protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_032959788.1
SIO_010081: LOC116945469
subclass of: SO_0000673
so part of: LOC116945469
location: join(581151..581385,583241..583329,588695..588787,591988..592196,593614..593697,595159..595307,595683..595774,597119..597219,597992..598088,599483..599601,600634..600797,601742..601855,604515..604696,607595..612364,613240..613388,614548..614943,616701..616829,620168..621410)
location: region:581151-621410:1
so has part: feature:581151-581385:1:exon
so has part: feature:583241-583329:1:exon
so has part: feature:588695-588787:1:exon
so has part: feature:591988-592196:1:exon
so has part: feature:593614-593697:1:exon
so has part: feature:595159-595307:1:exon
so has part: feature:595683-595774:1:exon
so has part: feature:597119-597219:1:exon
so has part: feature:597992-598088:1:exon
so has part: feature:599483-599601:1:exon
so has part: feature:600634-600797:1:exon
so has part: feature:601742-601855:1:exon
so has part: feature:604515-604696:1:exon
so has part: feature:607595-612364:1:exon
so has part: feature:613240-613388:1:exon
so has part: feature:614548-614943:1:exon
so has part: feature:616701-616829:1:exon
so has part: feature:620168-621410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:581151-581385:1:exon

position:581385:1
position: 581385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:583241-583329:1:exon

position:583241:1
position: 583241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583329:1
position: 583329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:588695-588787:1:exon

position:588695:1
position: 588695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588787:1
position: 588787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:591988-592196:1:exon

position:591988:1
position: 591988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592196:1
position: 592196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:593614-593697:1:exon

position:593614:1
position: 593614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593697:1
position: 593697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:595159-595307:1:exon

position:595159:1
position: 595159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595307:1
position: 595307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:595683-595774:1:exon

position:595683:1
position: 595683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595774:1
position: 595774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:597119-597219:1:exon

position:597119:1
position: 597119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597219:1
position: 597219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:597992-598088:1:exon

position:597992:1
position: 597992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598088:1
position: 598088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:599483-599601:1:exon

position:599483:1
position: 599483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599601:1
position: 599601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:600634-600797:1:exon

position:600634:1
position: 600634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600797:1
position: 600797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:601742-601855:1:exon

position:601742:1
position: 601742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601855:1
position: 601855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:604515-604696:1:exon

position:604515:1
position: 604515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604696:1
position: 604696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:607595-612364:1:exon

position:607595:1
position: 607595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612364:1
position: 612364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:613240-613388:1:exon

position:613240:1
position: 613240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613388:1
position: 613388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:614548-614943:1:exon

position:614548:1
position: 614548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614943:1
position: 614943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:616701-616829:1:exon

position:616701:1
position: 616701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616829:1
position: 616829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:620168-621410:1:exon

position:620168:1
position: 620168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945469
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945469
product: PHD and RING finger domain-containing protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_032959789.1
SIO_010081: LOC116945469
subclass of: SO_0000673
so part of: LOC116945469
location: join(581151..581385,583241..583329,588695..588787,591988..592196,593614..593697,595159..595307,595683..595774,597119..597219,597992..598088,599483..599601,600634..600797,601742..601855,604515..604696,607595..612364,613240..613388,614548..614934,616701..616829,620168..621410)
location: region:581151-621410:1
so has part: feature:581151-581385:1:exon
so has part: feature:583241-583329:1:exon
so has part: feature:588695-588787:1:exon
so has part: feature:591988-592196:1:exon
so has part: feature:593614-593697:1:exon
so has part: feature:595159-595307:1:exon
so has part: feature:595683-595774:1:exon
so has part: feature:597119-597219:1:exon
so has part: feature:597992-598088:1:exon
so has part: feature:599483-599601:1:exon
so has part: feature:600634-600797:1:exon
so has part: feature:601742-601855:1:exon
so has part: feature:604515-604696:1:exon
so has part: feature:607595-612364:1:exon
so has part: feature:613240-613388:1:exon
so has part: feature:614548-614934:1:exon
so has part: feature:616701-616829:1:exon
so has part: feature:620168-621410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:581151-581385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:583241-583329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588695-588787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:591988-592196:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:593614-593697:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:595159-595307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:595683-595774:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597119-597219:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:597992-598088:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:599483-599601:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:600634-600797:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:601742-601855:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:604515-604696:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:607595-612364:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:613240-613388:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614548-614934:1:exon

position:614934:1
position: 614934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:616701-616829:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:620168-621410:1:exon

LOC116945469
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945469
product: PHD and RING finger domain-containing protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_032959790.1
SIO_010081: LOC116945469
subclass of: SO_0000673
so part of: LOC116945469
location: join(581151..581271,583241..583329,588695..588787,591988..592196,593614..593697,595159..595307,595683..595774,597119..597219,597992..598088,599483..599601,600634..600797,601742..601855,604515..604696,607595..612364,613240..613388,614548..614943,616701..616829,620168..621410)
location: region:581151-621410:1
so has part: feature:581151-581271:1:exon
so has part: feature:583241-583329:1:exon
so has part: feature:588695-588787:1:exon
so has part: feature:591988-592196:1:exon
so has part: feature:593614-593697:1:exon
so has part: feature:595159-595307:1:exon
so has part: feature:595683-595774:1:exon
so has part: feature:597119-597219:1:exon
so has part: feature:597992-598088:1:exon
so has part: feature:599483-599601:1:exon
so has part: feature:600634-600797:1:exon
so has part: feature:601742-601855:1:exon
so has part: feature:604515-604696:1:exon
so has part: feature:607595-612364:1:exon
so has part: feature:613240-613388:1:exon
so has part: feature:614548-614943:1:exon
so has part: feature:616701-616829:1:exon
so has part: feature:620168-621410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:581151-581271:1:exon

position:581271:1
position: 581271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:583241-583329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588695-588787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:591988-592196:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:593614-593697:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:595159-595307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:595683-595774:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597119-597219:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:597992-598088:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:599483-599601:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:600634-600797:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:601742-601855:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:604515-604696:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:607595-612364:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:613240-613388:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614548-614943:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:616701-616829:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:620168-621410:1:exon

LOC116945469
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD and RING finger domain-containing protein 1-like isoform X1
translation: MSLVPSPGSTMDEDESHSEQGDRDDGIPHSQSSGESSDDDDDDCSDDEDCFLMDDWALCDSSGSRCQTSLSTAQSAPSSPGAGGSPRPGGLSSDEEGDSCPICLNGFRVQAVGIPESCQHAFCLDCLLEWAKNVNSCPVDRKPFKVISALSCFGGDVVRTIAVPNRKQKAHLWDDDGGSGGADEEETPCRACGLSDREERMLLCDACDAGFHMECLVPPLDSIPVEEWFCPTCLPRAPSIVSVAPGPMRVIARTRQSERVRARVNRSRLSFSQQRFMELFSPDPQLVQDLVAATVAGLNRRATPRHVSGRPKRGRRVNSPREPRASTSARRCHRRKGELMKRVRKMVKRTPGGSTGPPIGPVAAVGATLPLQRFSGPRRSDIGAPSFMLFEDPDQFDPFESAESPAEESAVDSKRRVLSRLAVHSHRPVARPIMAGAASEGPLRESPALQRVPCSPPVPESQPEPDLLGSILAGQAVLLMDSSKLLITRHGALQPRTPTGVTVSPSRPCGGASGAPVRGGDRPGARSCGTAGGNGGGGGGGGSGVPPHSSSSSSSSMPASSQQGGLVDAMTTHSNVSGSASSGIPAANGGGDPGRLRCSAAGPPSLPPPLLQAPWHGGGERCEGAGEKRPASARNKRHFKINRSFGLGEQGSEQDASVEDAGAVPWRPEAAELPFARIPSGKAAAVGALPVSSPGTSSSFTSTQGRVPHLGKIEIKLTGNSRGWQEQPASAPKRSPMRRPCPPSSSVPPTVATLLAHQAYDPSDPTDDEGANSEEGRARARVGRANSDGDGVGGTAAVEDDTYDPFRPTDSNPSSPPSPNSPSPEDGNSDGTDDLPATPGAGLPSPGECSSSDSEVLPDGEAPLVPSQDSPPPDPSRDSSRDSSWGTSRDGKEAAWKDGGDERSNPRQECGAAGGSDDSQERSPPCSGGEGYSKEQSMVECGKEARVGADTDTNLDEIPTTKSNVKDENTPRISASDGGETKSAGIGNMLEEGALPFKSELREDITGEGQLSVEDVTDGVHLEGKKGENQTQDLGMVSSTNQLSNKDLSTIIIGQAASEQCEPGKAVNDLGTDWQSVKSEAVPVDQGEAAQIGMQDCKDEDKTEGVMGTLEMSEEQGLPARVRSEVHVGTLPAKRSDGAREEVKTSRHASSAASAKQSRSGKRKSSEEPKDGCGEDGARAQRVLKEGHKCLPVPNTNAEPLEMGEIVDPADAFDGDPRAHAASAASRNASGPAQDEDLLSLHAGSEEDGFYAAEAGEGGGAGGKAQRGGDTRFARRKDRNYRHMGKRRSQQDECPREEKQGEQQRRRRSDSRSRRKQRKQRRRSRESGEGGSASGSSCRSEHRQRQKHSRASRSSSARREHERDRERDRERDRERDRERDREKEREKEREKDRERDRERVRERATRVKEHSRNEGSGDSVKDREKKRREREKKLKVKSHDRRREPSNPRDRWHEHSNSPEHRHERSSSRERQREPPSPRKRRRDRSDSHELRRERSHSRERWREPSSPRERRRERSGSRNADNAEEPCRHRSPKSPPPHTRPRERDRRKERAARSPLGVMPTVPPAAATPTDGSDGGGGSGSVRVKPKEDKRYERQLFGRGSMDHLKITIFSEVRSASVSSHVSAGQKGEGEWPQRQQSETEKRAKAKRAKAAPEPRGDGKSKSDVKRSKRASADGAEGGTRRKRSSKAGKSDVIASPKRTFVNPESAAPVSELVRHENDVDQADPLMKFEIKVQPKQDSVRLWPEDEEVEESHVTFKSAVSAADSPVCAEDHESSKSSKMCPDYVKTRDAPKQGSTQEAPGLEPEEQEEGELEAEVVEGPVEPESRAPCPQEPLPSSPIEKQKRRDRVRIRRWHPVDEASSGGVGVTLLEPQLPLSLPIALDDGALTDIESDAMSVDVAGETSPVCGDASPGLEEALLGPRVMSPRRVVGSPGLGFASPGRTVPLANFGMASPVSKAVSPGPGVMPFSHGLSLPGLEVSLPGLEPSSPASGEASPDVEA…
SIO_010081: LOC116945469
subclass of: SO_0000673
so part of: LOC116945469
location: join(581381..581385,583241..583329,588695..588787,591988..592196,593614..593697,595159..595307,595683..595774,597119..597219,597992..598088,599483..599601,600634..600797,601742..601855,604515..604696,607595..612364,613240..613388,614548..614943,616701..616829,620168..620359)
location: region:581381-620359:1
so has part: feature:581381-581385:1:exon
so has part: feature:583241-583329:1:exon
so has part: feature:588695-588787:1:exon
so has part: feature:591988-592196:1:exon
so has part: feature:593614-593697:1:exon
so has part: feature:595159-595307:1:exon
so has part: feature:595683-595774:1:exon
so has part: feature:597119-597219:1:exon
so has part: feature:597992-598088:1:exon
so has part: feature:599483-599601:1:exon
so has part: feature:600634-600797:1:exon
so has part: feature:601742-601855:1:exon
so has part: feature:604515-604696:1:exon
so has part: feature:607595-612364:1:exon
so has part: feature:613240-613388:1:exon
so has part: feature:614548-614943:1:exon
so has part: feature:616701-616829:1:exon
so has part: feature:620168-620359:1:exon

XP_032815679.1
type: Protein
SIO_000068: ncbiprotein

position:581381:1
position: 581381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620359:1
position: 620359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581381-581385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:583241-583329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588695-588787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:591988-592196:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:593614-593697:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:595159-595307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:595683-595774:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597119-597219:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:597992-598088:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:599483-599601:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:600634-600797:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:601742-601855:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:604515-604696:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:607595-612364:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:613240-613388:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614548-614943:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:616701-616829:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:620168-620359:1:exon

LOC116945469
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD and RING finger domain-containing protein 1-like isoform X2
translation: MSLVPSPGSTMDEDESHSEQGDRDDGIPHSQSSGESSDDDDDDCSDDEDCFLMDDWALCDSSGSRCQTSLSTAQSAPSSPGAGGSPRPGGLSSDEEGDSCPICLNGFRVQAVGIPESCQHAFCLDCLLEWAKNVNSCPVDRKPFKVISALSCFGGDVVRTIAVPNRKQKAHLWDDDGGSGGADEEETPCRACGLSDREERMLLCDACDAGFHMECLVPPLDSIPVEEWFCPTCLPRAPSIVSVAPGPMRVIARTRQSERVRARVNRSRLSFSQQRFMELFSPDPQLVQDLVAATVAGLNRRATPRHVSGRPKRGRRVNSPREPRASTSARRCHRRKGELMKRVRKMVKRTPGGSTGPPIGPVAAVGATLPLQRFSGPRRSDIGAPSFMLFEDPDQFDPFESAESPAEESAVDSKRRVLSRLAVHSHRPVARPIMAGAASEGPLRESPALQRVPCSPPVPESQPEPDLLGSILAGQAVLLMDSSKLLITRHGALQPRTPTGVTVSPSRPCGGASGAPVRGGDRPGARSCGTAGGNGGGGGGGGSGVPPHSSSSSSSSMPASSQQGGLVDAMTTHSNVSGSASSGIPAANGGGDPGRLRCSAAGPPSLPPPLLQAPWHGGGERCEGAGEKRPASARNKRHFKINRSFGLGEQGSEQDASVEDAGAVPWRPEAAELPFARIPSGKAAAVGALPVSSPGTSSSFTSTQGRVPHLGKIEIKLTGNSRGWQEQPASAPKRSPMRRPCPPSSSVPPTVATLLAHQAYDPSDPTDDEGANSEEGRARARVGRANSDGDGVGGTAAVEDDTYDPFRPTDSNPSSPPSPNSPSPEDGNSDGTDDLPATPGAGLPSPGECSSSDSEVLPDGEAPLVPSQDSPPPDPSRDSSRDSSWGTSRDGKEAAWKDGGDERSNPRQECGAAGGSDDSQERSPPCSGGEGYSKEQSMVECGKEARVGADTDTNLDEIPTTKSNVKDENTPRISASDGGETKSAGIGNMLEEGALPFKSELREDITGEGQLSVEDVTDGVHLEGKKGENQTQDLGMVSSTNQLSNKDLSTIIIGQAASEQCEPGKAVNDLGTDWQSVKSEAVPVDQGEAAQIGMQDCKDEDKTEGVMGTLEMSEEQGLPARVRSEVHVGTLPAKRSDGAREEVKTSRHASSAASAKQSRSGKRKSSEEPKDGCGEDGARAQRVLKEGHKCLPVPNTNAEPLEMGEIVDPADAFDGDPRAHAASAASRNASGPAQDEDLLSLHAGSEEDGFYAAEAGEGGGAGGKAQRGGDTRFARRKDRNYRHMGKRRSQQDECPREEKQGEQQRRRRSDSRSRRKQRKQRRRSRESGEGGSASGSSCRSEHRQRQKHSRASRSSSARREHERDRERDRERDRERDRERDREKEREKEREKDRERDRERVRERATRVKEHSRNEGSGDSVKDREKKRREREKKLKVKSHDRRREPSNPRDRWHEHSNSPEHRHERSSSRERQREPPSPRKRRRDRSDSHELRRERSHSRERWREPSSPRERRRERSGSRNADNAEEPCRHRSPKSPPPHTRPRERDRRKERAARSPLGVMPTVPPAAATPTDGSDGGGGSGSVRVKPKEDKRYERQLFGRGSMDHLKITIFSEVRSASVSSHVSAGQKGEGEWPQRQQSETEKRAKAKRAKAAPEPRGDGKSKSDVKRSKRASADGAEGGTRRKRSSKAGKSDVIASPKRTFVNPESAAPVSELVRHENDVDQADPLMKFEIKVQPKQDSVRLWPEDEEVEESHVTFKSAVSAADSPVCAEDHESSKSSKMCPDYVKTRDAPKQGSTQEAPGLEPEEQEEGELEAEVVEGPVEPESRAPCPQEPLPSSPIEKQKRRDRVRIRRWHPVDEASSGGVGVTLLEPQLPLSLPIALDDGALTDIESDAMSVDVAGETSPVCGDASPGLEEALLGPRVMSPRRVVGSPGLGFASPGRTVPLANFGMASPVSKAVSPGPGVMPFSHGLSLPGLEVSLPGLEPSSPASGEASPDVEA…
SIO_010081: LOC116945469
subclass of: SO_0000673
so part of: LOC116945469
location: join(581381..581385,583241..583329,588695..588787,591988..592196,593614..593697,595159..595307,595683..595774,597119..597219,597992..598088,599483..599601,600634..600797,601742..601855,604515..604696,607595..612364,613240..613388,614548..614934,616701..616829,620168..620359)
location: region:581381-620359:1
so has part: feature:581381-581385:1:exon
so has part: feature:583241-583329:1:exon
so has part: feature:588695-588787:1:exon
so has part: feature:591988-592196:1:exon
so has part: feature:593614-593697:1:exon
so has part: feature:595159-595307:1:exon
so has part: feature:595683-595774:1:exon
so has part: feature:597119-597219:1:exon
so has part: feature:597992-598088:1:exon
so has part: feature:599483-599601:1:exon
so has part: feature:600634-600797:1:exon
so has part: feature:601742-601855:1:exon
so has part: feature:604515-604696:1:exon
so has part: feature:607595-612364:1:exon
so has part: feature:613240-613388:1:exon
so has part: feature:614548-614934:1:exon
so has part: feature:616701-616829:1:exon
so has part: feature:620168-620359:1:exon

XP_032815680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:581381-581385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:583241-583329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588695-588787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:591988-592196:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:593614-593697:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:595159-595307:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:595683-595774:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597119-597219:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:597992-598088:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:599483-599601:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:600634-600797:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:601742-601855:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:604515-604696:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:607595-612364:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:613240-613388:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614548-614934:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:616701-616829:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:620168-620359:1:exon

LOC116945469
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD and RING finger domain-containing protein 1-like isoform X3
translation: MDEDESHSEQGDRDDGIPHSQSSGESSDDDDDDCSDDEDCFLMDDWALCDSSGSRCQTSLSTAQSAPSSPGAGGSPRPGGLSSDEEGDSCPICLNGFRVQAVGIPESCQHAFCLDCLLEWAKNVNSCPVDRKPFKVISALSCFGGDVVRTIAVPNRKQKAHLWDDDGGSGGADEEETPCRACGLSDREERMLLCDACDAGFHMECLVPPLDSIPVEEWFCPTCLPRAPSIVSVAPGPMRVIARTRQSERVRARVNRSRLSFSQQRFMELFSPDPQLVQDLVAATVAGLNRRATPRHVSGRPKRGRRVNSPREPRASTSARRCHRRKGELMKRVRKMVKRTPGGSTGPPIGPVAAVGATLPLQRFSGPRRSDIGAPSFMLFEDPDQFDPFESAESPAEESAVDSKRRVLSRLAVHSHRPVARPIMAGAASEGPLRESPALQRVPCSPPVPESQPEPDLLGSILAGQAVLLMDSSKLLITRHGALQPRTPTGVTVSPSRPCGGASGAPVRGGDRPGARSCGTAGGNGGGGGGGGSGVPPHSSSSSSSSMPASSQQGGLVDAMTTHSNVSGSASSGIPAANGGGDPGRLRCSAAGPPSLPPPLLQAPWHGGGERCEGAGEKRPASARNKRHFKINRSFGLGEQGSEQDASVEDAGAVPWRPEAAELPFARIPSGKAAAVGALPVSSPGTSSSFTSTQGRVPHLGKIEIKLTGNSRGWQEQPASAPKRSPMRRPCPPSSSVPPTVATLLAHQAYDPSDPTDDEGANSEEGRARARVGRANSDGDGVGGTAAVEDDTYDPFRPTDSNPSSPPSPNSPSPEDGNSDGTDDLPATPGAGLPSPGECSSSDSEVLPDGEAPLVPSQDSPPPDPSRDSSRDSSWGTSRDGKEAAWKDGGDERSNPRQECGAAGGSDDSQERSPPCSGGEGYSKEQSMVECGKEARVGADTDTNLDEIPTTKSNVKDENTPRISASDGGETKSAGIGNMLEEGALPFKSELREDITGEGQLSVEDVTDGVHLEGKKGENQTQDLGMVSSTNQLSNKDLSTIIIGQAASEQCEPGKAVNDLGTDWQSVKSEAVPVDQGEAAQIGMQDCKDEDKTEGVMGTLEMSEEQGLPARVRSEVHVGTLPAKRSDGAREEVKTSRHASSAASAKQSRSGKRKSSEEPKDGCGEDGARAQRVLKEGHKCLPVPNTNAEPLEMGEIVDPADAFDGDPRAHAASAASRNASGPAQDEDLLSLHAGSEEDGFYAAEAGEGGGAGGKAQRGGDTRFARRKDRNYRHMGKRRSQQDECPREEKQGEQQRRRRSDSRSRRKQRKQRRRSRESGEGGSASGSSCRSEHRQRQKHSRASRSSSARREHERDRERDRERDRERDRERDREKEREKEREKDRERDRERVRERATRVKEHSRNEGSGDSVKDREKKRREREKKLKVKSHDRRREPSNPRDRWHEHSNSPEHRHERSSSRERQREPPSPRKRRRDRSDSHELRRERSHSRERWREPSSPRERRRERSGSRNADNAEEPCRHRSPKSPPPHTRPRERDRRKERAARSPLGVMPTVPPAAATPTDGSDGGGGSGSVRVKPKEDKRYERQLFGRGSMDHLKITIFSEVRSASVSSHVSAGQKGEGEWPQRQQSETEKRAKAKRAKAAPEPRGDGKSKSDVKRSKRASADGAEGGTRRKRSSKAGKSDVIASPKRTFVNPESAAPVSELVRHENDVDQADPLMKFEIKVQPKQDSVRLWPEDEEVEESHVTFKSAVSAADSPVCAEDHESSKSSKMCPDYVKTRDAPKQGSTQEAPGLEPEEQEEGELEAEVVEGPVEPESRAPCPQEPLPSSPIEKQKRRDRVRIRRWHPVDEASSGGVGVTLLEPQLPLSLPIALDDGALTDIESDAMSVDVAGETSPVCGDASPGLEEALLGPRVMSPRRVVGSPGLGFASPGRTVPLANFGMASPVSKAVSPGPGVMPFSHGLSLPGLEVSLPGLEPSSPASGEASPDVEAPSPGPGEASP…
SIO_010081: LOC116945469
subclass of: SO_0000673
so part of: LOC116945469
location: join(583266..583329,588695..588787,591988..592196,593614..593697,595159..595307,595683..595774,597119..597219,597992..598088,599483..599601,600634..600797,601742..601855,604515..604696,607595..612364,613240..613388,614548..614943,616701..616829,620168..620359)
location: region:583266-620359:1
so has part: feature:583266-583329:1:exon
so has part: feature:588695-588787:1:exon
so has part: feature:591988-592196:1:exon
so has part: feature:593614-593697:1:exon
so has part: feature:595159-595307:1:exon
so has part: feature:595683-595774:1:exon
so has part: feature:597119-597219:1:exon
so has part: feature:597992-598088:1:exon
so has part: feature:599483-599601:1:exon
so has part: feature:600634-600797:1:exon
so has part: feature:601742-601855:1:exon
so has part: feature:604515-604696:1:exon
so has part: feature:607595-612364:1:exon
so has part: feature:613240-613388:1:exon
so has part: feature:614548-614943:1:exon
so has part: feature:616701-616829:1:exon
so has part: feature:620168-620359:1:exon

XP_032815681.1
type: Protein
SIO_000068: ncbiprotein

position:583266:1
position: 583266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583266-583329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:588695-588787:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:591988-592196:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:593614-593697:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:595159-595307:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:595683-595774:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:597119-597219:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597992-598088:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:599483-599601:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:600634-600797:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:601742-601855:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:604515-604696:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:607595-612364:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:613240-613388:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:614548-614943:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:616701-616829:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:620168-620359:1:exon

LOC116945428
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945428
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 633451..658002
location: region:633451-658002:1
so has part: feature:633451-658002:1:exon
subclass of: SO_0000010

116945428
type: Gene
SIO_000068: ncbigene

position:633451:1
position: 633451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658002:1
position: 658002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633451-658002:1:exon

LOC116945428
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945428
product: keratin, type 1 cytoskeletal 11-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032959741.1
SIO_010081: LOC116945428
subclass of: SO_0000673
so part of: LOC116945428
location: join(633451..634395,635944..636028,637220..637376,639247..639255,640759..640914,650138..650263,651646..651864,653335..653367,657899..658002)
location: region:633451-658002:1
so has part: feature:633451-634395:1:exon
so has part: feature:635944-636028:1:exon
so has part: feature:637220-637376:1:exon
so has part: feature:639247-639255:1:exon
so has part: feature:640759-640914:1:exon
so has part: feature:650138-650263:1:exon
so has part: feature:651646-651864:1:exon
so has part: feature:653335-653367:1:exon
so has part: feature:657899-658002:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:633451-634395:1:exon

position:634395:1
position: 634395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:635944-636028:1:exon

position:635944:1
position: 635944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636028:1
position: 636028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:637220-637376:1:exon

position:637220:1
position: 637220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637376:1
position: 637376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:639247-639255:1:exon

position:639247:1
position: 639247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639255:1
position: 639255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:640759-640914:1:exon

position:640759:1
position: 640759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640914:1
position: 640914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:650138-650263:1:exon

position:650138:1
position: 650138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650263:1
position: 650263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:651646-651864:1:exon

position:651646:1
position: 651646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651864:1
position: 651864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:653335-653367:1:exon

position:653335:1
position: 653335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653367:1
position: 653367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:657899-658002:1:exon

position:657899:1
position: 657899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945428
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945428
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: keratin, type 1 cytoskeletal 11-like
translation: MRQQLPPHRFSPRHQHHAARGASCSYIRPCLFIQPCSAAAVAVVVVAAVVRLKMSSYTRGFSSMSLGGSRARGGLASSYSGARAAGVALPEPAGRWPGTPLRDAHGEREEMQELNKRLAGYLHKVKELEAANATTEANIQELLRVRGAIVQDHGARFAAIADLRSKMLAQVLENARIGLDVDNARLAADDFRCKWETEVALRSSVEADIGNLHMLLDEYTGSRDAMASEAQSMHEELAYMKRNHRERLALSKAQVEGSSVSIQVDSAKGVDLTKMLGDMREQYESLIARSRGQAEEAFRKQLESVKVQSFQQDQAASAAKAELAEVRRTMQGLTVELESLMALLGSLEEQLRQTEHDNARELSSHGDQIGALQGRLHSVHGATNAQLRDYSELLNMKMKLEQEIGTYRRLLEGEESSPVIPAEATKEEVKKRKKVVITQTIVDGEVINTSEEVSESNEKS
SIO_010081: LOC116945428
subclass of: SO_0000673
so part of: LOC116945428
location: join(633898..634395,635944..636028,637220..637376,639247..639255,640759..640914,650138..650263,651646..651864,653335..653367,657899..658002)
location: region:633898-658002:1
so has part: feature:633898-634395:1:exon
so has part: feature:635944-636028:1:exon
so has part: feature:637220-637376:1:exon
so has part: feature:639247-639255:1:exon
so has part: feature:640759-640914:1:exon
so has part: feature:650138-650263:1:exon
so has part: feature:651646-651864:1:exon
so has part: feature:653335-653367:1:exon
so has part: feature:657899-658002:1:exon

XP_032815632.1
type: Protein
SIO_000068: ncbiprotein

position:633898:1
position: 633898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633898-634395:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:635944-636028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:637220-637376:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639247-639255:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:640759-640914:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:650138-650263:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651646-651864:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653335-653367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:657899-658002:1:exon

LOC116945470
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945470
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 669443..756501
location: region:669443-756501:1
so has part: feature:669443-756501:1:exon
subclass of: SO_0000010

116945470
type: Gene
SIO_000068: ncbigene

position:669443:1
position: 669443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756501:1
position: 756501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669443-756501:1:exon

LOC116945470
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945470
product: mitochondrial glutamate carrier 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032959792.1
SIO_010081: LOC116945470
subclass of: SO_0000673
so part of: LOC116945470
location: join(669443..669568,672673..672813,727047..727221,728005..728130,729314..729369,741592..741682,746120..746238,750903..751140,751285..751439,752605..752680,752795..756501)
location: region:669443-756501:1
so has part: feature:669443-669568:1:exon
so has part: feature:672673-672813:1:exon
so has part: feature:727047-727221:1:exon
so has part: feature:728005-728130:1:exon
so has part: feature:729314-729369:1:exon
so has part: feature:741592-741682:1:exon
so has part: feature:746120-746238:1:exon
so has part: feature:750903-751140:1:exon
so has part: feature:751285-751439:1:exon
so has part: feature:752605-752680:1:exon
so has part: feature:752795-756501:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:669443-669568:1:exon

position:669568:1
position: 669568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:672673-672813:1:exon

position:672673:1
position: 672673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672813:1
position: 672813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:727047-727221:1:exon

position:727047:1
position: 727047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727221:1
position: 727221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:728005-728130:1:exon

position:728005:1
position: 728005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728130:1
position: 728130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:729314-729369:1:exon

position:729314:1
position: 729314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729369:1
position: 729369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:741592-741682:1:exon

position:741592:1
position: 741592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741682:1
position: 741682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:746120-746238:1:exon

position:746120:1
position: 746120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746238:1
position: 746238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:750903-751140:1:exon

position:750903:1
position: 750903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751140:1
position: 751140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:751285-751439:1:exon

position:751285:1
position: 751285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751439:1
position: 751439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:752605-752680:1:exon

position:752605:1
position: 752605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752680:1
position: 752680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:752795-756501:1:exon

position:752795:1
position: 752795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945470
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945470
product: mitochondrial glutamate carrier 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_032959791.1
SIO_010081: LOC116945470
subclass of: SO_0000673
so part of: LOC116945470
location: join(698653..699090,727047..727221,728005..728130,729314..729369,741592..741682,746120..746238,750903..751140,751285..751439,752605..752680,752795..756501)
location: region:698653-756501:1
so has part: feature:698653-699090:1:exon
so has part: feature:727047-727221:1:exon
so has part: feature:728005-728130:1:exon
so has part: feature:729314-729369:1:exon
so has part: feature:741592-741682:1:exon
so has part: feature:746120-746238:1:exon
so has part: feature:750903-751140:1:exon
so has part: feature:751285-751439:1:exon
so has part: feature:752605-752680:1:exon
so has part: feature:752795-756501:1:exon

position:698653:1
position: 698653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:698653-699090:1:exon

position:699090:1
position: 699090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:727047-727221:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:728005-728130:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:729314-729369:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741592-741682:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:746120-746238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:750903-751140:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:751285-751439:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:752605-752680:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:752795-756501:1:exon

LOC116945470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945470
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial glutamate carrier 1-like
translation: MAEKPLSLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQEGQRMYRNMFDCLIKTVRSDGYFGMYRGAAVNLTLVTPEKAIKLAANDFFRNMLSKDGKKLTLFREMLAGCGAGTCQVIITTPMEMLKIQLQDAGRLAAQKSLFGSAPAGSAGKREAASGAKPPMPGPVPGPVPPSRGFSSGTPLGASRSALQITRDLLRAQGIAGLYKGLGATLLRDVPFSIIYFPLFANLNSLGVTTPGERAPFYHSFASGCIAGSMAAVAVNPCDVIKTRLQSLQRGVNEDTYTGIVDCTKKILAKEGGRAFFKGGGCRALVIAPLFGIVQVIYFFGVGEMIIDYFH
SIO_010081: LOC116945470
subclass of: SO_0000673
so part of: LOC116945470
location: join(727202..727221,728005..728130,729314..729369,741592..741682,746120..746238,750903..751140,751285..751439,752605..752680,752795..752936)
location: region:727202-752936:1
so has part: feature:727202-727221:1:exon
so has part: feature:728005-728130:1:exon
so has part: feature:729314-729369:1:exon
so has part: feature:741592-741682:1:exon
so has part: feature:746120-746238:1:exon
so has part: feature:750903-751140:1:exon
so has part: feature:751285-751439:1:exon
so has part: feature:752605-752680:1:exon
so has part: feature:752795-752936:1:exon

XP_032815682.1
type: Protein
SIO_000068: ncbiprotein

position:727202:1
position: 727202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752936:1
position: 752936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727202-727221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:728005-728130:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729314-729369:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:741592-741682:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:746120-746238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:750903-751140:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:751285-751439:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:752605-752680:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:752795-752936:1:exon

LOC116945470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945470
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial glutamate carrier 1-like
translation: MAEKPLSLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQEGQRMYRNMFDCLIKTVRSDGYFGMYRGAAVNLTLVTPEKAIKLAANDFFRNMLSKDGKKLTLFREMLAGCGAGTCQVIITTPMEMLKIQLQDAGRLAAQKSLFGSAPAGSAGKREAASGAKPPMPGPVPGPVPPSRGFSSGTPLGASRSALQITRDLLRAQGIAGLYKGLGATLLRDVPFSIIYFPLFANLNSLGVTTPGERAPFYHSFASGCIAGSMAAVAVNPCDVIKTRLQSLQRGVNEDTYTGIVDCTKKILAKEGGRAFFKGGGCRALVIAPLFGIVQVIYFFGVGEMIIDYFH
SIO_010081: LOC116945470
subclass of: SO_0000673
so part of: LOC116945470
location: join(727202..727221,728005..728130,729314..729369,741592..741682,746120..746238,750903..751140,751285..751439,752605..752680,752795..752936)
location: region:727202-752936:1
so has part: feature:727202-727221:1:exon
so has part: feature:728005-728130:1:exon
so has part: feature:729314-729369:1:exon
so has part: feature:741592-741682:1:exon
so has part: feature:746120-746238:1:exon
so has part: feature:750903-751140:1:exon
so has part: feature:751285-751439:1:exon
so has part: feature:752605-752680:1:exon
so has part: feature:752795-752936:1:exon

XP_032815683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:727202-727221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:728005-728130:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729314-729369:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:741592-741682:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:746120-746238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:750903-751140:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:751285-751439:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:752605-752680:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:752795-752936:1:exon

LOC116945430
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945430
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 767408..768127
location: region:767408-768127:1
so has part: feature:767408-768127:1:exon
subclass of: SO_0000010

116945430
type: Gene
SIO_000068: ncbigene

position:767408:1
position: 767408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768127:1
position: 768127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:767408-768127:1:exon

LOC116945430
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945430
product: 300 kDa antigen AG231-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_032959742.1
SIO_010081: LOC116945430
subclass of: SO_0000673
so part of: LOC116945430
location: 767408..768127
location: region:767408-768127:1
so has part: feature:767408-768127:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:767408-768127:1:exon

LOC116945430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945430
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 300 kDa antigen AG231-like
translation: MEIHGAAFLVGLVSQTRRLCRVTTECRVTTECPVTTERRVTTECPVTTECPVTTERRVTTECRVTTECRVTTERRVTTECRVTTECHANRVTTERRVTTECPVTTECRVTTECHANRVTTECPVTTERRVTTECPVTTECPVTTERRVTTECRVTTECRVTTERRVTTECRVTTECHTNRVTTERRVTTECPVTTECRVTTECRVTTECPVTTECPVTTECRVTTECPVTTERRVTTER
SIO_010081: LOC116945430
subclass of: SO_0000673
so part of: LOC116945430
location: 767408..768127
location: region:767408-768127:1
so has part: feature:767408-768127:1:exon

XP_032815633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:767408-768127:1:exon

LOC116945471
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945471
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(773501..786011)
location: region:773501-786011:-1
so has part: feature:773501-786011:-1:exon
subclass of: SO_0000010

116945471
type: Gene
SIO_000068: ncbigene

position:773501:-1
position: 773501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786011:-1
position: 786011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:773501-786011:-1:exon

LOC116945471
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945471
product: V-type proton ATPase subunit E 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032959794.1
SIO_010081: LOC116945471
subclass of: SO_0000673
so part of: LOC116945471
location: complement(join(773501..774455,775016..775103,775324..775418,777341..777409,778902..778991,779535..779601,780199..780308,780765..780873,785738..786011))
location: region:773501-786011:-1
so has part: feature:785738-786011:-1:exon
so has part: feature:780765-780873:-1:exon
so has part: feature:780199-780308:-1:exon
so has part: feature:779535-779601:-1:exon
so has part: feature:778902-778991:-1:exon
so has part: feature:777341-777409:-1:exon
so has part: feature:775324-775418:-1:exon
so has part: feature:775016-775103:-1:exon
so has part: feature:773501-774455:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:785738-786011:-1:exon

position:785738:-1
position: 785738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:780765-780873:-1:exon

position:780765:-1
position: 780765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780873:-1
position: 780873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:780199-780308:-1:exon

position:780199:-1
position: 780199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780308:-1
position: 780308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:779535-779601:-1:exon

position:779535:-1
position: 779535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779601:-1
position: 779601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:778902-778991:-1:exon

position:778902:-1
position: 778902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778991:-1
position: 778991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:777341-777409:-1:exon

position:777341:-1
position: 777341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777409:-1
position: 777409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:775324-775418:-1:exon

position:775324:-1
position: 775324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775418:-1
position: 775418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:775016-775103:-1:exon

position:775016:-1
position: 775016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775103:-1
position: 775103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:773501-774455:-1:exon

position:774455:-1
position: 774455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945471
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945471
product: V-type proton ATPase subunit E 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_032959793.1
SIO_010081: LOC116945471
subclass of: SO_0000673
so part of: LOC116945471
location: complement(join(773501..774455,775016..775103,775324..775418,777341..777409,778902..778991,779535..779601,780199..780308,780765..780830,785738..785984))
location: region:773501-785984:-1
so has part: feature:785738-785984:-1:exon
so has part: feature:780765-780830:-1:exon
so has part: feature:780199-780308:-1:exon
so has part: feature:779535-779601:-1:exon
so has part: feature:778902-778991:-1:exon
so has part: feature:777341-777409:-1:exon
so has part: feature:775324-775418:-1:exon
so has part: feature:775016-775103:-1:exon
so has part: feature:773501-774455:-1:exon

position:785984:-1
position: 785984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785738-785984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:780765-780830:-1:exon

position:780830:-1
position: 780830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:780199-780308:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:779535-779601:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778902-778991:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:777341-777409:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:775324-775418:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:775016-775103:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:773501-774455:-1:exon

LOC116945471
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945471
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-type proton ATPase subunit E 1-like isoform X1
translation: MPLTDGDVLKQVKHMVAFIEQEATEKVEEIDSKAEEEFNLEKGRLMQSHRSKIMEHYDKKDKQLEMQKKIQISNLMNQSRLKVLETRNDLLKELLNEARGRLVQLTRNATVYRTIMDGLVLQGLLQLLEPVVIVRCRQSDLALVKSSVTKNIPTYRAATKKEICITVDEQLFLPLDICGGVELYNANAKIKVSNTLDSRLEFMSHQMMPEIRVYLYGKNSNRKFND
SIO_010081: LOC116945471
subclass of: SO_0000673
so part of: LOC116945471
location: complement(join(774393..774455,775016..775103,775324..775418,777341..777409,778902..778991,779535..779601,780199..780308,780765..780830,785738..785770))
location: region:774393-785770:-1
so has part: feature:785738-785770:-1:exon
so has part: feature:780765-780830:-1:exon
so has part: feature:780199-780308:-1:exon
so has part: feature:779535-779601:-1:exon
so has part: feature:778902-778991:-1:exon
so has part: feature:777341-777409:-1:exon
so has part: feature:775324-775418:-1:exon
so has part: feature:775016-775103:-1:exon
so has part: feature:774393-774455:-1:exon

XP_032815684.1
type: Protein
SIO_000068: ncbiprotein

position:774393:-1
position: 774393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785770:-1
position: 785770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785738-785770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:780765-780830:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:780199-780308:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:779535-779601:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778902-778991:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:777341-777409:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:775324-775418:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:775016-775103:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:774393-774455:-1:exon

LOC116945471
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945471
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-type proton ATPase subunit E 1-like isoform X2
translation: MVAFIEQEATEKVEEIDSKAEEEFNLEKGRLMQSHRSKIMEHYDKKDKQLEMQKKIQISNLMNQSRLKVLETRNDLLKELLNEARGRLVQLTRNATVYRTIMDGLVLQGLLQLLEPVVIVRCRQSDLALVKSSVTKNIPTYRAATKKEICITVDEQLFLPLDICGGVELYNANAKIKVSNTLDSRLEFMSHQMMPEIRVYLYGKNSNRKFND
SIO_010081: LOC116945471
subclass of: SO_0000673
so part of: LOC116945471
location: complement(join(774393..774455,775016..775103,775324..775418,777341..777409,778902..778991,779535..779601,780199..780308,780765..780821))
location: region:774393-780821:-1
so has part: feature:780765-780821:-1:exon
so has part: feature:780199-780308:-1:exon
so has part: feature:779535-779601:-1:exon
so has part: feature:778902-778991:-1:exon
so has part: feature:777341-777409:-1:exon
so has part: feature:775324-775418:-1:exon
so has part: feature:775016-775103:-1:exon
so has part: feature:774393-774455:-1:exon

XP_032815685.1
type: Protein
SIO_000068: ncbiprotein

position:780821:-1
position: 780821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:780765-780821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:780199-780308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779535-779601:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:778902-778991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:777341-777409:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:775324-775418:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:775016-775103:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:774393-774455:-1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 805725..805796
location: region:805725-805796:1
so has part: feature:805725-805796:1:exon
subclass of: SO_0000663

116945685
type: Gene
SIO_000068: ncbigene

position:805725:1
position: 805725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805796:1
position: 805796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:805725-805796:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:805757..805759,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 805725..805796
location: region:805725-805796:1
so has part: feature:805725-805796:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:805725-805796:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 806725..806796
location: region:806725-806796:1
so has part: feature:806725-806796:1:exon
subclass of: SO_0000663

116945696
type: Gene
SIO_000068: ncbigene

position:806725:1
position: 806725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806796:1
position: 806796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806725-806796:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:806757..806759,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 806725..806796
location: region:806725-806796:1
so has part: feature:806725-806796:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:806725-806796:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 807227..807298
location: region:807227-807298:1
so has part: feature:807227-807298:1:exon
subclass of: SO_0000663

116945708
type: Gene
SIO_000068: ncbigene

position:807227:1
position: 807227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807298:1
position: 807298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807227-807298:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:807259..807261,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 807227..807298
location: region:807227-807298:1
so has part: feature:807227-807298:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:807227-807298:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 808242..808313
location: region:808242-808313:1
so has part: feature:808242-808313:1:exon
subclass of: SO_0000663

116945720
type: Gene
SIO_000068: ncbigene

position:808242:1
position: 808242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808313:1
position: 808313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808242-808313:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:808274..808276,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 808242..808313
location: region:808242-808313:1
so has part: feature:808242-808313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:808242-808313:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 808747..808818
location: region:808747-808818:1
so has part: feature:808747-808818:1:exon
subclass of: SO_0000663

116945724
type: Gene
SIO_000068: ncbigene

position:808747:1
position: 808747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808818:1
position: 808818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808747-808818:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:808779..808781,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 808747..808818
location: region:808747-808818:1
so has part: feature:808747-808818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:808747-808818:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 809249..809320
location: region:809249-809320:1
so has part: feature:809249-809320:1:exon
subclass of: SO_0000663

116945686
type: Gene
SIO_000068: ncbigene

position:809249:1
position: 809249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809320:1
position: 809320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809249-809320:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:809281..809283,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 809249..809320
location: region:809249-809320:1
so has part: feature:809249-809320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:809249-809320:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 810778..810849
location: region:810778-810849:1
so has part: feature:810778-810849:1:exon
subclass of: SO_0000663

116945687
type: Gene
SIO_000068: ncbigene

position:810778:1
position: 810778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810849:1
position: 810849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:810778-810849:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:810810..810812,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 810778..810849
location: region:810778-810849:1
so has part: feature:810778-810849:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:810778-810849:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 811291..811362
location: region:811291-811362:1
so has part: feature:811291-811362:1:exon
subclass of: SO_0000663

116945688
type: Gene
SIO_000068: ncbigene

position:811291:1
position: 811291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811362:1
position: 811362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811291-811362:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:811323..811325,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 811291..811362
location: region:811291-811362:1
so has part: feature:811291-811362:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:811291-811362:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 811796..811867
location: region:811796-811867:1
so has part: feature:811796-811867:1:exon
subclass of: SO_0000663

116945689
type: Gene
SIO_000068: ncbigene

position:811796:1
position: 811796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811867:1
position: 811867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811796-811867:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:811828..811830,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 811796..811867
location: region:811796-811867:1
so has part: feature:811796-811867:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:811796-811867:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 812302..812373
location: region:812302-812373:1
so has part: feature:812302-812373:1:exon
subclass of: SO_0000663

116945690
type: Gene
SIO_000068: ncbigene

position:812302:1
position: 812302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812373:1
position: 812373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812302-812373:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:812334..812336,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 812302..812373
location: region:812302-812373:1
so has part: feature:812302-812373:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:812302-812373:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 812804..812875
location: region:812804-812875:1
so has part: feature:812804-812875:1:exon
subclass of: SO_0000663

116945691
type: Gene
SIO_000068: ncbigene

position:812804:1
position: 812804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812875:1
position: 812875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812804-812875:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:812836..812838,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 812804..812875
location: region:812804-812875:1
so has part: feature:812804-812875:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:812804-812875:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 813309..813380
location: region:813309-813380:1
so has part: feature:813309-813380:1:exon
subclass of: SO_0000663

116945692
type: Gene
SIO_000068: ncbigene

position:813309:1
position: 813309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813380:1
position: 813380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813309-813380:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:813341..813343,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 813309..813380
location: region:813309-813380:1
so has part: feature:813309-813380:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:813309-813380:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 813817..813888
location: region:813817-813888:1
so has part: feature:813817-813888:1:exon
subclass of: SO_0000663

116945693
type: Gene
SIO_000068: ncbigene

position:813817:1
position: 813817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813888:1
position: 813888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813817-813888:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:813849..813851,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 813817..813888
location: region:813817-813888:1
so has part: feature:813817-813888:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:813817-813888:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 814323..814394
location: region:814323-814394:1
so has part: feature:814323-814394:1:exon
subclass of: SO_0000663

116945694
type: Gene
SIO_000068: ncbigene

position:814323:1
position: 814323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814394:1
position: 814394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:814323-814394:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:814355..814357,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 814323..814394
location: region:814323-814394:1
so has part: feature:814323-814394:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:814323-814394:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 814828..814899
location: region:814828-814899:1
so has part: feature:814828-814899:1:exon
subclass of: SO_0000663

116945695
type: Gene
SIO_000068: ncbigene

position:814828:1
position: 814828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814899:1
position: 814899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:814828-814899:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:814860..814862,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 814828..814899
location: region:814828-814899:1
so has part: feature:814828-814899:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:814828-814899:1:exon

LOC116945472
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945472
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 815074..818069
location: region:815074-818069:1
so has part: feature:815074-818069:1:exon
subclass of: SO_0000011

116945472
type: Gene
SIO_000068: ncbigene

position:815074:1
position: 815074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:818069:1
position: 818069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:815074-818069:1:exon

LOC116945472
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116945472
product: uncharacterized LOC116945472
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004403333.1
SIO_010081: LOC116945472
subclass of: SO_0000673
so part of: LOC116945472
location: join(815074..815377,817924..818069)
location: region:815074-818069:1
so has part: feature:815074-815377:1:exon
so has part: feature:817924-818069:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:815074-815377:1:exon

position:815377:1
position: 815377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:817924-818069:1:exon

position:817924:1
position: 817924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 815334..815405
location: region:815334-815405:1
so has part: feature:815334-815405:1:exon
subclass of: SO_0000663

116945697
type: Gene
SIO_000068: ncbigene

position:815334:1
position: 815334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815405:1
position: 815405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:815334-815405:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:815366..815368,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 815334..815405
location: region:815334-815405:1
so has part: feature:815334-815405:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:815334-815405:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 816354..816425
location: region:816354-816425:1
so has part: feature:816354-816425:1:exon
subclass of: SO_0000663

116945698
type: Gene
SIO_000068: ncbigene

position:816354:1
position: 816354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816425:1
position: 816425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:816354-816425:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:816386..816388,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 816354..816425
location: region:816354-816425:1
so has part: feature:816354-816425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:816354-816425:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 816863..816934
location: region:816863-816934:1
so has part: feature:816863-816934:1:exon
subclass of: SO_0000663

116945699
type: Gene
SIO_000068: ncbigene

position:816863:1
position: 816863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816934:1
position: 816934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:816863-816934:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:816895..816897,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 816863..816934
location: region:816863-816934:1
so has part: feature:816863-816934:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:816863-816934:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 817369..817440
location: region:817369-817440:1
so has part: feature:817369-817440:1:exon
subclass of: SO_0000663

116945700
type: Gene
SIO_000068: ncbigene

position:817369:1
position: 817369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817440:1
position: 817440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817369-817440:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:817401..817403,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 817369..817440
location: region:817369-817440:1
so has part: feature:817369-817440:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:817369-817440:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 818899..818970
location: region:818899-818970:1
so has part: feature:818899-818970:1:exon
subclass of: SO_0000663

116945701
type: Gene
SIO_000068: ncbigene

position:818899:1
position: 818899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:818970:1
position: 818970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:818899-818970:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:818931..818933,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 818899..818970
location: region:818899-818970:1
so has part: feature:818899-818970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:818899-818970:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 819406..819477
location: region:819406-819477:1
so has part: feature:819406-819477:1:exon
subclass of: SO_0000663

116945703
type: Gene
SIO_000068: ncbigene

position:819406:1
position: 819406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819477:1
position: 819477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819406-819477:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:819438..819440,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 819406..819477
location: region:819406-819477:1
so has part: feature:819406-819477:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:819406-819477:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 819911..819982
location: region:819911-819982:1
so has part: feature:819911-819982:1:exon
subclass of: SO_0000663

116945704
type: Gene
SIO_000068: ncbigene

position:819911:1
position: 819911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819982:1
position: 819982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819911-819982:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:819943..819945,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 819911..819982
location: region:819911-819982:1
so has part: feature:819911-819982:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:819911-819982:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 820414..820485
location: region:820414-820485:1
so has part: feature:820414-820485:1:exon
subclass of: SO_0000663

116945705
type: Gene
SIO_000068: ncbigene

position:820414:1
position: 820414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820485:1
position: 820485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:820414-820485:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:820446..820448,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 820414..820485
location: region:820414-820485:1
so has part: feature:820414-820485:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:820414-820485:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 820919..820990
location: region:820919-820990:1
so has part: feature:820919-820990:1:exon
subclass of: SO_0000663

116945706
type: Gene
SIO_000068: ncbigene

position:820919:1
position: 820919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820990:1
position: 820990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:820919-820990:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:820951..820953,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 820919..820990
location: region:820919-820990:1
so has part: feature:820919-820990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:820919-820990:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 821425..821496
location: region:821425-821496:1
so has part: feature:821425-821496:1:exon
subclass of: SO_0000663

116945707
type: Gene
SIO_000068: ncbigene

position:821425:1
position: 821425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821496:1
position: 821496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821425-821496:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:821457..821459,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 821425..821496
location: region:821425-821496:1
so has part: feature:821425-821496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:821425-821496:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 821931..822002
location: region:821931-822002:1
so has part: feature:821931-822002:1:exon
subclass of: SO_0000663

116945709
type: Gene
SIO_000068: ncbigene

position:821931:1
position: 821931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822002:1
position: 822002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821931-822002:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:821963..821965,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 821931..822002
location: region:821931-822002:1
so has part: feature:821931-822002:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:821931-822002:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 822432..822503
location: region:822432-822503:1
so has part: feature:822432-822503:1:exon
subclass of: SO_0000663

116945710
type: Gene
SIO_000068: ncbigene

position:822432:1
position: 822432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822503:1
position: 822503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822432-822503:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:822464..822466,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 822432..822503
location: region:822432-822503:1
so has part: feature:822432-822503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:822432-822503:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 822938..823009
location: region:822938-823009:1
so has part: feature:822938-823009:1:exon
subclass of: SO_0000663

116945711
type: Gene
SIO_000068: ncbigene

position:822938:1
position: 822938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823009:1
position: 823009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822938-823009:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:822970..822972,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 822938..823009
location: region:822938-823009:1
so has part: feature:822938-823009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:822938-823009:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 823444..823515
location: region:823444-823515:1
so has part: feature:823444-823515:1:exon
subclass of: SO_0000663

116945712
type: Gene
SIO_000068: ncbigene

position:823444:1
position: 823444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823515:1
position: 823515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823444-823515:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:823476..823478,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 823444..823515
location: region:823444-823515:1
so has part: feature:823444-823515:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:823444-823515:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 823949..824020
location: region:823949-824020:1
so has part: feature:823949-824020:1:exon
subclass of: SO_0000663

116945713
type: Gene
SIO_000068: ncbigene

position:823949:1
position: 823949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824020:1
position: 824020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823949-824020:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:823981..823983,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 823949..824020
location: region:823949-824020:1
so has part: feature:823949-824020:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:823949-824020:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 824454..824525
location: region:824454-824525:1
so has part: feature:824454-824525:1:exon
subclass of: SO_0000663

116945714
type: Gene
SIO_000068: ncbigene

position:824454:1
position: 824454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824525:1
position: 824525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824454-824525:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:824486..824488,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 824454..824525
location: region:824454-824525:1
so has part: feature:824454-824525:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:824454-824525:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 824963..825034
location: region:824963-825034:1
so has part: feature:824963-825034:1:exon
subclass of: SO_0000663

116945715
type: Gene
SIO_000068: ncbigene

position:824963:1
position: 824963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825034:1
position: 825034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824963-825034:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:824995..824997,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 824963..825034
location: region:824963-825034:1
so has part: feature:824963-825034:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:824963-825034:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 825974..826045
location: region:825974-826045:1
so has part: feature:825974-826045:1:exon
subclass of: SO_0000663

116945716
type: Gene
SIO_000068: ncbigene

position:825974:1
position: 825974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826045:1
position: 826045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825974-826045:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:826006..826008,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 825974..826045
location: region:825974-826045:1
so has part: feature:825974-826045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:825974-826045:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 826989..827060
location: region:826989-827060:1
so has part: feature:826989-827060:1:exon
subclass of: SO_0000663

116945717
type: Gene
SIO_000068: ncbigene

position:826989:1
position: 826989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827060:1
position: 827060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826989-827060:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:827021..827023,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 826989..827060
location: region:826989-827060:1
so has part: feature:826989-827060:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:826989-827060:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 827494..827565
location: region:827494-827565:1
so has part: feature:827494-827565:1:exon
subclass of: SO_0000663

116945719
type: Gene
SIO_000068: ncbigene

position:827494:1
position: 827494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827565:1
position: 827565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:827494-827565:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:827526..827528,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 827494..827565
location: region:827494-827565:1
so has part: feature:827494-827565:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:827494-827565:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 827999..828070
location: region:827999-828070:1
so has part: feature:827999-828070:1:exon
subclass of: SO_0000663

116945721
type: Gene
SIO_000068: ncbigene

position:827999:1
position: 827999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828070:1
position: 828070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:827999-828070:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:828031..828033,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 827999..828070
location: region:827999-828070:1
so has part: feature:827999-828070:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:827999-828070:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 829018..829089
location: region:829018-829089:1
so has part: feature:829018-829089:1:exon
subclass of: SO_0000663

116945722
type: Gene
SIO_000068: ncbigene

position:829018:1
position: 829018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829089:1
position: 829089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829018-829089:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:829050..829052,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 829018..829089
location: region:829018-829089:1
so has part: feature:829018-829089:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:829018-829089:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 829522..829593
location: region:829522-829593:1
so has part: feature:829522-829593:1:exon
subclass of: SO_0000663

116945723
type: Gene
SIO_000068: ncbigene

position:829522:1
position: 829522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829593:1
position: 829593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829522-829593:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 7757
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:829554..829556,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 829522..829593
location: region:829522-829593:1
so has part: feature:829522-829593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:829522-829593:1:exon

LOC116945473
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945473
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 859801..869385
location: region:859801-869385:1
so has part: feature:859801-869385:1:exon
subclass of: SO_0000010

116945473
type: Gene
SIO_000068: ncbigene

position:859801:1
position: 859801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869385:1
position: 869385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:859801-869385:1:exon

LOC116945473
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945473
product: uncharacterized LOC116945473
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032959796.1
SIO_010081: LOC116945473
subclass of: SO_0000673
so part of: LOC116945473
location: join(859801..860345,860603..860731,861637..861682,863794..863872,865584..865671,869229..869385)
location: region:859801-869385:1
so has part: feature:859801-860345:1:exon
so has part: feature:860603-860731:1:exon
so has part: feature:861637-861682:1:exon
so has part: feature:863794-863872:1:exon
so has part: feature:865584-865671:1:exon
so has part: feature:869229-869385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:859801-860345:1:exon

position:860345:1
position: 860345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:860603-860731:1:exon

position:860603:1
position: 860603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860731:1
position: 860731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:861637-861682:1:exon

position:861637:1
position: 861637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861682:1
position: 861682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:863794-863872:1:exon

position:863794:1
position: 863794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:863872:1
position: 863872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:865584-865671:1:exon

position:865584:1
position: 865584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865671:1
position: 865671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:869229-869385:1:exon

position:869229:1
position: 869229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945473
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945473
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116945473
translation: MFQMLNSDWFMMNLVAKSGNQELFNTSLYTGYFPWLNIIIQCDRYFYQPGQTVQCILFGVYGNRLPYLGRFNISLQSSLGDVKKTWQNVQGEKGIVSLQYSLSETALEGYWYLQVEAEEHGTNSYWNAFEVRNYVDIVLIDVPRYFDLSGSDDLSGVISAWYQGKTFKGTATVTIGPYYNSNAWITKDVNVDGNGYFTFRRSELTQLFFANTSEIYYPTISVVITDDATGMYVELFSRCM
SIO_010081: LOC116945473
subclass of: SO_0000673
so part of: LOC116945473
location: join(860118..860345,860603..860731,861637..861682,863794..863872,865584..865671,869229..869381)
location: region:860118-869381:1
so has part: feature:860118-860345:1:exon
so has part: feature:860603-860731:1:exon
so has part: feature:861637-861682:1:exon
so has part: feature:863794-863872:1:exon
so has part: feature:865584-865671:1:exon
so has part: feature:869229-869381:1:exon

XP_032815687.1
type: Protein
SIO_000068: ncbiprotein

position:860118:1
position: 860118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869381:1
position: 869381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:860118-860345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:860603-860731:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:861637-861682:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:863794-863872:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:865584-865671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:869229-869381:1:exon

LOC116945453
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945453
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 870808..879198
location: region:870808-879198:1
so has part: feature:870808-879198:1:exon
subclass of: SO_0000011

116945453
type: Gene
SIO_000068: ncbigene

position:870808:1
position: 870808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879198:1
position: 879198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:870808-879198:1:exon

LOC116945453
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116945453
product: uncharacterized LOC116945453
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004403328.1
SIO_010081: LOC116945453
subclass of: SO_0000673
so part of: LOC116945453
location: join(870808..870916,877500..877730,879104..879198)
location: region:870808-879198:1
so has part: feature:870808-870916:1:exon
so has part: feature:877500-877730:1:exon
so has part: feature:879104-879198:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:870808-870916:1:exon

position:870916:1
position: 870916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:877500-877730:1:exon

position:877500:1
position: 877500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877730:1
position: 877730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:879104-879198:1:exon

position:879104:1
position: 879104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945454
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 914038..916003
location: region:914038-916003:1
so has part: feature:914038-916003:1:exon
subclass of: SO_0000010

116945454
type: Gene
SIO_000068: ncbigene

position:914038:1
position: 914038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916003:1
position: 916003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914038-916003:1:exon

LOC116945454
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945454
product: cell wall protein AWA1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032959764.1
SIO_010081: LOC116945454
subclass of: SO_0000673
so part of: LOC116945454
location: join(914038..914171,914299..914401,915000..916003)
location: region:914038-916003:1
so has part: feature:914038-914171:1:exon
so has part: feature:914299-914401:1:exon
so has part: feature:915000-916003:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:914038-914171:1:exon

position:914171:1
position: 914171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:914299-914401:1:exon

position:914299:1
position: 914299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914401:1
position: 914401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:915000-916003:1:exon

position:915000:1
position: 915000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945454
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell wall protein AWA1-like
translation: MALMEMNLLSGFLGDDRIALTDNLKLVETSPGKIHLYFVNLNENTTCVNITQYRIAPVAKTMEALVSISDYYEPRTRVEMQYKSLTLSSITLQSFCGENCTIFQSNVRAAAISTTAATQTTVKASATTAATQTTVKASATTAATQTTVKASATTAATQTTVKAGGSTAASQTTVQVIGATTATQSTVKASNTTAAIKTTVKASGTTAATQTTVKPSGATTTTQTTVIASNTTAAIETTVKASGISSCGMNPFPWILLASAFCLSWMGL
SIO_010081: LOC116945454
subclass of: SO_0000673
so part of: LOC116945454
location: join(914052..914171,914299..914401,915000..915583)
location: region:914052-915583:1
so has part: feature:914052-914171:1:exon
so has part: feature:914299-914401:1:exon
so has part: feature:915000-915583:1:exon

XP_032815655.1
type: Protein
SIO_000068: ncbiprotein

position:914052:1
position: 914052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915583:1
position: 915583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914052-914171:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:914299-914401:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:915000-915583:1:exon

LOC116945475
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945475
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 917393..923722
location: region:917393-923722:1
so has part: feature:917393-923722:1:exon
subclass of: SO_0000010

116945475
type: Gene
SIO_000068: ncbigene

position:917393:1
position: 917393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923722:1
position: 923722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917393-923722:1:exon

LOC116945475
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945475
product: CD109 antigen-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032959798.1
SIO_010081: LOC116945475
subclass of: SO_0000673
so part of: LOC116945475
location: join(917393..919675,920252..920428,923420..923722)
location: region:917393-923722:1
so has part: feature:917393-919675:1:exon
so has part: feature:920252-920428:1:exon
so has part: feature:923420-923722:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:917393-919675:1:exon

position:919675:1
position: 919675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:920252-920428:1:exon

position:920252:1
position: 920252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920428:1
position: 920428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:923420-923722:1:exon

position:923420:1
position: 923420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945475
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD109 antigen-like
translation: MSDKWCNLKCRVFPIMQYPGFPQTYSESALLSLYDNTNFTRSFVFNFPPNIVQGSSSAVLYIYGDIVGPSLTGLDQLIQMPYGCGEQNMINFAPGIYIRKYLDVSRQTTPDIAAKSLNYMNSGYERELMYRRSDGSFSAFGNSDQQGSTW
SIO_010081: LOC116945475
subclass of: SO_0000673
so part of: LOC116945475
location: join(919486..919675,920252..920428,923420..923505)
location: region:919486-923505:1
so has part: feature:919486-919675:1:exon
so has part: feature:920252-920428:1:exon
so has part: feature:923420-923505:1:exon

XP_032815689.1
type: Protein
SIO_000068: ncbiprotein

position:919486:1
position: 919486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923505:1
position: 923505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:919486-919675:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:920252-920428:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:923420-923505:1:exon

LOC116945474
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 923977..927608
location: region:923977-927608:1
so has part: feature:923977-927608:1:exon
subclass of: SO_0000010

116945474
type: Gene
SIO_000068: ncbigene

position:923977:1
position: 923977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927608:1
position: 927608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:923977-927608:1:exon

LOC116945474
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945474
product: CD109 antigen-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032959797.1
SIO_010081: LOC116945474
subclass of: SO_0000673
so part of: LOC116945474
location: join(923977..924264,926742..926913,927321..927608)
location: region:923977-927608:1
so has part: feature:923977-924264:1:exon
so has part: feature:926742-926913:1:exon
so has part: feature:927321-927608:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:923977-924264:1:exon

position:924264:1
position: 924264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:926742-926913:1:exon

position:926742:1
position: 926742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926913:1
position: 926913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:927321-927608:1:exon

position:927321:1
position: 927321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945474
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD109 antigen-like
translation: MCPALSFQIPRLTAFVLRTFLQARSYIPVDSNVIDTARNFLLNSLAPSGQFTEHGYVIHRELQGGSASHISLTAYTLLAFLEDSPNNKVNISSAIHFLEANVSGGGVAASLPLALTAYALSLAKSSHADTALTLLNNRSTLIENGLKFWSDSASSEQSYYWQPSAITIETTAYALLAHLHQNKIAEAVPIMNWLSQQRNHLGGYASTQVTTLPGEHSSTELLESDTIHNLYFKFFFV
SIO_010081: LOC116945474
subclass of: SO_0000673
so part of: LOC116945474
location: join(924010..924264,926742..926913,927321..927607)
location: region:924010-927607:1
so has part: feature:924010-924264:1:exon
so has part: feature:926742-926913:1:exon
so has part: feature:927321-927607:1:exon

XP_032815688.1
type: Protein
SIO_000068: ncbiprotein

position:924010:1
position: 924010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927607:1
position: 927607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:924010-924264:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:926742-926913:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927321-927607:1:exon

LOC116945476
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945476
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 928841..936597
location: region:928841-936597:1
so has part: feature:928841-936597:1:exon
subclass of: SO_0000010

116945476
type: Gene
SIO_000068: ncbigene

position:928841:1
position: 928841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936597:1
position: 936597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928841-936597:1:exon

LOC116945476
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945476
product: CD109 antigen-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032959800.1
SIO_010081: LOC116945476
subclass of: SO_0000673
so part of: LOC116945476
location: join(928841..929577,930049..930114,930584..930735,932006..932150,932275..932377,935699..936597)
location: region:928841-936597:1
so has part: feature:928841-929577:1:exon
so has part: feature:930049-930114:1:exon
so has part: feature:930584-930735:1:exon
so has part: feature:932006-932150:1:exon
so has part: feature:932275-932377:1:exon
so has part: feature:935699-936597:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:928841-929577:1:exon

position:929577:1
position: 929577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:930049-930114:1:exon

position:930049:1
position: 930049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930114:1
position: 930114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:930584-930735:1:exon

position:930584:1
position: 930584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930735:1
position: 930735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:932006-932150:1:exon

position:932006:1
position: 932006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932150:1
position: 932150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:932275-932377:1:exon

position:932275:1
position: 932275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932377:1
position: 932377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:935699-936597:1:exon

position:935699:1
position: 935699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945476
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945476
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD109 antigen-like isoform X2
translation: MNATDKRIVKISTSSNLNVTLSGTGSGQVIAQLNVFYNLRDSPVVRRARSAAPSPSYELDVYFEDTGVNGSIGEQVVLTACTRWMGQDASGMALMETNLLSGFLGDDKIALTDNLKLVETSTGKIHLYFVNLNENSTCVNITQHRVAPVAKTMEALVSISDYYEPRTRVEMQYKSLKLSNITLQSLCGENCTFQSNVLAAANETTLNASSTTAATQTTVKASGIMSGSGMNPSLWFLMPAAFCLSWMGL
SIO_010081: LOC116945476
subclass of: SO_0000673
so part of: LOC116945476
location: join(929548..929577,930049..930114,930584..930735,932006..932150,932275..932377,935699..935952)
location: region:929548-935952:1
so has part: feature:929548-929577:1:exon
so has part: feature:930049-930114:1:exon
so has part: feature:930584-930735:1:exon
so has part: feature:932006-932150:1:exon
so has part: feature:932275-932377:1:exon
so has part: feature:935699-935952:1:exon

XP_032815691.1
type: Protein
SIO_000068: ncbiprotein

position:929548:1
position: 929548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935952:1
position: 935952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929548-929577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:930049-930114:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:930584-930735:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:932006-932150:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:932275-932377:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:935699-935952:1:exon

LOC116945476
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945476
product: CD109 antigen-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032959799.1
SIO_010081: LOC116945476
subclass of: SO_0000673
so part of: LOC116945476
location: join(929800..930114,930584..930735,932006..932150,932275..932377,935699..936597)
location: region:929800-936597:1
so has part: feature:929800-930114:1:exon
so has part: feature:930584-930735:1:exon
so has part: feature:932006-932150:1:exon
so has part: feature:932275-932377:1:exon
so has part: feature:935699-936597:1:exon

position:929800:1
position: 929800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929800-930114:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:930584-930735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:932006-932150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:932275-932377:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:935699-936597:1:exon

LOC116945476
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945476
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD109 antigen-like isoform X1
translation: MRDSDDFGNFYPPVQRPSLMIDSCVFNGISFLLFQQISTSSNLNVTLSGTGSGQVIAQLNVFYNLRDSPVVRRARSAAPSPSYELDVYFEDTGVNGSIGEQVVLTACTRWMGQDASGMALMETNLLSGFLGDDKIALTDNLKLVETSTGKIHLYFVNLNENSTCVNITQHRVAPVAKTMEALVSISDYYEPRTRVEMQYKSLKLSNITLQSLCGENCTFQSNVLAAANETTLNASSTTAATQTTVKASGIMSGSGMNPSLWFLMPAAFCLSWMGL
SIO_010081: LOC116945476
subclass of: SO_0000673
so part of: LOC116945476
location: join(929941..930114,930584..930735,932006..932150,932275..932377,935699..935952)
location: region:929941-935952:1
so has part: feature:929941-930114:1:exon
so has part: feature:930584-930735:1:exon
so has part: feature:932006-932150:1:exon
so has part: feature:932275-932377:1:exon
so has part: feature:935699-935952:1:exon

XP_032815690.1
type: Protein
SIO_000068: ncbiprotein

position:929941:1
position: 929941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929941-930114:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:930584-930735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:932006-932150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:932275-932377:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:935699-935952:1:exon

LOC116945477
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945477
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(969563..1012775)
location: region:969563-1012775:-1
so has part: feature:969563-1012775:-1:exon
subclass of: SO_0000010

116945477
type: Gene
SIO_000068: ncbigene

position:969563:-1
position: 969563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012775:-1
position: 1012775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969563-1012775:-1:exon

LOC116945477
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945477
product: sodium-coupled monocarboxylate transporter 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032959801.1
SIO_010081: LOC116945477
subclass of: SO_0000673
so part of: LOC116945477
location: complement(join(969563..970398,971602..971690,972210..972328,973244..973434,976747..976833,987378..987445,992776..992888,993887..993975,997356..997485,1004062..1004202,1008028..1008182,1008590..1008657,1010148..1010199,1010391..1010456,1011813..1012775))
location: region:969563-1012775:-1
so has part: feature:1011813-1012775:-1:exon
so has part: feature:1010391-1010456:-1:exon
so has part: feature:1010148-1010199:-1:exon
so has part: feature:1008590-1008657:-1:exon
so has part: feature:1008028-1008182:-1:exon
so has part: feature:1004062-1004202:-1:exon
so has part: feature:997356-997485:-1:exon
so has part: feature:993887-993975:-1:exon
so has part: feature:992776-992888:-1:exon
so has part: feature:987378-987445:-1:exon
so has part: feature:976747-976833:-1:exon
so has part: feature:973244-973434:-1:exon
so has part: feature:972210-972328:-1:exon
so has part: feature:971602-971690:-1:exon
so has part: feature:969563-970398:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1011813-1012775:-1:exon

position:1011813:-1
position: 1011813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1010391-1010456:-1:exon

position:1010391:-1
position: 1010391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010456:-1
position: 1010456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1010148-1010199:-1:exon

position:1010148:-1
position: 1010148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010199:-1
position: 1010199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1008590-1008657:-1:exon

position:1008590:-1
position: 1008590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008657:-1
position: 1008657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1008028-1008182:-1:exon

position:1008028:-1
position: 1008028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008182:-1
position: 1008182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1004062-1004202:-1:exon

position:1004062:-1
position: 1004062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004202:-1
position: 1004202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:997356-997485:-1:exon

position:997356:-1
position: 997356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997485:-1
position: 997485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:993887-993975:-1:exon

position:993887:-1
position: 993887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993975:-1
position: 993975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:992776-992888:-1:exon

position:992776:-1
position: 992776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992888:-1
position: 992888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:987378-987445:-1:exon

position:987378:-1
position: 987378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987445:-1
position: 987445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:976747-976833:-1:exon

position:976747:-1
position: 976747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976833:-1
position: 976833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:973244-973434:-1:exon

position:973244:-1
position: 973244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973434:-1
position: 973434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:972210-972328:-1:exon

position:972210:-1
position: 972210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972328:-1
position: 972328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:971602-971690:-1:exon

position:971602:-1
position: 971602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971690:-1
position: 971690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:969563-970398:-1:exon

position:970398:-1
position: 970398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945477
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945477
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-coupled monocarboxylate transporter 1-like
translation: MHLTEIHTELGMLMCLKTLLFKEKTPKGLAIVNELLANCAMDAVSGKIVGTFGVWDYVLFALMLLVSAAIGVYYATQERSNADFLMGGRQLSPVPVSVSLTASFMSAIAVLGTPVEIYRYGISFGYMGLTYVLMVVVSAEVFLPVFYELGITSTYEYLELRFNKIIRLFGTVFYIVQTVLYTGIVIYAPALALNQVTGFNLWGSIMATGIVCTFYTTLGGLKAVVWTDVFQIGVMVAGYLAVIIQGTILQGGFSVTWERSQQGGRLDPLSFHPDPRFRHTFWSVLVGGTFVWTTIYGVNQSQVQRYLACKTQRQAKLALYLNLLGLWIILACSVLCGLVMYAQYADCDPLTAGLVSASDQLMPFLVMDILSDFPGVPGLFVSSAFSGTLSTVSSSINALAAVTLEDLIKPRFMNLPEKRLSLVSKGLSVSYGVICIAMAVAASGMGSILQAALMVFGILGGPMLGVFILGILFPCSNDYGAAAGLTAGFLLALWVGVGAQFYPPPVDKTLPLPLNTSGCLWLNQTDSFLNQTIITLLAPTSNGLPPDQPAIASTWYSLSYLYYSAVGTLGVVIVGMFVSVLTGGRKGKEVSPSLLVRSCLPCSWRKSHSDIAVVEKVASAAVPSKPLGKCHTASMGTTNPSFDIGEAM
SIO_010081: LOC116945477
subclass of: SO_0000673
so part of: LOC116945477
location: complement(join(970288..970398,971602..971690,972210..972328,973244..973434,976747..976833,987378..987445,992776..992888,993887..993975,997356..997485,1004062..1004202,1008028..1008182,1008590..1008657,1010148..1010199,1010391..1010456,1011813..1012280))
location: region:970288-1012280:-1
so has part: feature:1011813-1012280:-1:exon
so has part: feature:1010391-1010456:-1:exon
so has part: feature:1010148-1010199:-1:exon
so has part: feature:1008590-1008657:-1:exon
so has part: feature:1008028-1008182:-1:exon
so has part: feature:1004062-1004202:-1:exon
so has part: feature:997356-997485:-1:exon
so has part: feature:993887-993975:-1:exon
so has part: feature:992776-992888:-1:exon
so has part: feature:987378-987445:-1:exon
so has part: feature:976747-976833:-1:exon
so has part: feature:973244-973434:-1:exon
so has part: feature:972210-972328:-1:exon
so has part: feature:971602-971690:-1:exon
so has part: feature:970288-970398:-1:exon

XP_032815692.1
type: Protein
SIO_000068: ncbiprotein

position:970288:-1
position: 970288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012280:-1
position: 1012280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1011813-1012280:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1010391-1010456:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1010148-1010199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1008590-1008657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1008028-1008182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1004062-1004202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:997356-997485:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:993887-993975:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:992776-992888:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987378-987445:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:976747-976833:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:973244-973434:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:972210-972328:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:971602-971690:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:970288-970398:-1:exon

LOC116945478
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945478
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1009391..1079266
location: region:1009391-1079266:1
so has part: feature:1009391-1079266:1:exon
subclass of: SO_0000010

116945478
type: Gene
SIO_000068: ncbigene

position:1009391:1
position: 1009391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079266:1
position: 1079266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009391-1079266:1:exon

LOC116945478
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945478
product: synaptotagmin-1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032959805.1
SIO_010081: LOC116945478
subclass of: SO_0000673
so part of: LOC116945478
location: join(1009391..1009493,1034559..1034717,1060767..1060941,1061819..1061979,1062443..1062553,1063613..1063780,1064765..1064932,1075082..1075199,1076903..1077036,1078679..1079266)
location: region:1009391-1079266:1
so has part: feature:1009391-1009493:1:exon
so has part: feature:1034559-1034717:1:exon
so has part: feature:1060767-1060941:1:exon
so has part: feature:1061819-1061979:1:exon
so has part: feature:1062443-1062553:1:exon
so has part: feature:1063613-1063780:1:exon
so has part: feature:1064765-1064932:1:exon
so has part: feature:1075082-1075199:1:exon
so has part: feature:1076903-1077036:1:exon
so has part: feature:1078679-1079266:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1009391-1009493:1:exon

position:1009493:1
position: 1009493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1034559-1034717:1:exon

position:1034559:1
position: 1034559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034717:1
position: 1034717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1060767-1060941:1:exon

position:1060767:1
position: 1060767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060941:1
position: 1060941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1061819-1061979:1:exon

position:1061819:1
position: 1061819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061979:1
position: 1061979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1062443-1062553:1:exon

position:1062443:1
position: 1062443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1062553:1
position: 1062553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1063613-1063780:1:exon

position:1063613:1
position: 1063613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063780:1
position: 1063780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1064765-1064932:1:exon

position:1064765:1
position: 1064765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064932:1
position: 1064932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1075082-1075199:1:exon

position:1075082:1
position: 1075082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075199:1
position: 1075199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1076903-1077036:1:exon

position:1076903:1
position: 1076903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077036:1
position: 1077036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1078679-1079266:1:exon

position:1078679:1
position: 1078679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945478
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945478
product: synaptotagmin-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032959804.1
SIO_010081: LOC116945478
subclass of: SO_0000673
so part of: LOC116945478
location: join(1033932..1034717,1060767..1060941,1061819..1061979,1062443..1062553,1063613..1063780,1064765..1064932,1075082..1075199,1076903..1077036,1078679..1079266)
location: region:1033932-1079266:1
so has part: feature:1033932-1034717:1:exon
so has part: feature:1060767-1060941:1:exon
so has part: feature:1061819-1061979:1:exon
so has part: feature:1062443-1062553:1:exon
so has part: feature:1063613-1063780:1:exon
so has part: feature:1064765-1064932:1:exon
so has part: feature:1075082-1075199:1:exon
so has part: feature:1076903-1077036:1:exon
so has part: feature:1078679-1079266:1:exon

position:1033932:1
position: 1033932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1033932-1034717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1060767-1060941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1061819-1061979:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1062443-1062553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1063613-1063780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1064765-1064932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1075082-1075199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1076903-1077036:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1078679-1079266:1:exon

LOC116945431
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945431
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1055407..1057018)
location: region:1055407-1057018:-1
so has part: feature:1055407-1057018:-1:exon
subclass of: SO_0000010

116945431
type: Gene
SIO_000068: ncbigene

position:1055407:-1
position: 1055407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1057018:-1
position: 1057018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055407-1057018:-1:exon

LOC116945431
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945431
product: zinc finger MYM-type protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032959743.1
SIO_010081: LOC116945431
subclass of: SO_0000673
so part of: LOC116945431
location: complement(1055407..1057018)
location: region:1055407-1057018:-1
so has part: feature:1055407-1057018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1055407-1057018:-1:exon

LOC116945431
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945431
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 1-like
translation: MLKYPSKFVGGAARRPTASLFVQFDWLEYSFISESVYCFYCYLLLPLPTDNVASAFIYSASFSTWNKIGGKNCSLLKHQGGHKSAHNIAVKKARDLLNAWQHVITGDAGLARQNAKTIDGNRKRLDASVDVMHVCMNQGIAMRGHDESPGSLNRGNFLEILNMLRKRDALLAAITWENAPQNATMTSPDVQKDLIHAHAQLVRRRLDTEIGDAYYCIMADESRDVSKKEQLVFVNHFVEVSTGILRERLVDIQHVPDTCAPTLCSAIVNLLSSRERPIETCRGQGYDGASSMSGEIAGLQTLIKAMNDMAYYTHCWAHKLQLALVTACTNGVTDIAVFFDLVQDIIHTATSSCKRNDQLLAEHKKLVDDLVDELAVSTGRGQNQETALSAAGNMRWSSFWRLLHRLIEMFNATAVIQNVEEDGAKAE
SIO_010081: LOC116945431
subclass of: SO_0000673
so part of: LOC116945431
location: complement(1055407..1056690)
location: region:1055407-1056690:-1
so has part: feature:1055407-1056690:-1:exon

XP_032815634.1
type: Protein
SIO_000068: ncbiprotein

position:1056690:-1
position: 1056690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055407-1056690:-1:exon

LOC116945478
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945478
product: synaptotagmin-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_032959803.1
SIO_010081: LOC116945478
subclass of: SO_0000673
so part of: LOC116945478
location: join(1058513..1058918,1060767..1060941,1061819..1061979,1062443..1062553,1063613..1063780,1064765..1064932,1075082..1075199,1076903..1077036,1078679..1079266)
location: region:1058513-1079266:1
so has part: feature:1058513-1058918:1:exon
so has part: feature:1060767-1060941:1:exon
so has part: feature:1061819-1061979:1:exon
so has part: feature:1062443-1062553:1:exon
so has part: feature:1063613-1063780:1:exon
so has part: feature:1064765-1064932:1:exon
so has part: feature:1075082-1075199:1:exon
so has part: feature:1076903-1077036:1:exon
so has part: feature:1078679-1079266:1:exon

position:1058513:1
position: 1058513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058513-1058918:1:exon

position:1058918:1
position: 1058918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1060767-1060941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1061819-1061979:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1062443-1062553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1063613-1063780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1064765-1064932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1075082-1075199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1076903-1077036:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1078679-1079266:1:exon

LOC116945478
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945478
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-1-like
translation: MLLDDDIFISTTNTSSQENVISTEAPQPNTFSLVQNTMLPPIKNGSPFKIPFPYWMLITSAAVAALFSLVCCCCIWKSCCSKKKEKEKNTLKLKEPKKPKMFKNKVQPDLEDIDPGFIEDIYKENTLGRLQFSLDYNLKTSQFTVGILQATDLAAMDIGGMSDPYVRVYLLPHKKKKFETSVHRKTLNPIFEEKFTFTVPFEELVERVLVMVVYDFDRFSRHDIIGELRIPLSSVDLSHSVEEWRDLQKTEKDDQDRLGDICFSLRYIPSTGKLTIVILEAKNLKVMDVSGASDPYVKIQVMEGGIRLKKKKTTVKKKALNPYFNEAFSFDIPFENIEKIQLVFSVMDYDSLSRNDAIGKVYVGCGAAGAGHRHWSDMLANPRRPITQWHTLQPVEEVKASLGKLDTPLP
SIO_010081: LOC116945478
subclass of: SO_0000673
so part of: LOC116945478
location: join(1060788..1060941,1061819..1061979,1062443..1062553,1063613..1063780,1064765..1064932,1075082..1075199,1076903..1077036,1078679..1078897)
location: region:1060788-1078897:1
so has part: feature:1060788-1060941:1:exon
so has part: feature:1061819-1061979:1:exon
so has part: feature:1062443-1062553:1:exon
so has part: feature:1063613-1063780:1:exon
so has part: feature:1064765-1064932:1:exon
so has part: feature:1075082-1075199:1:exon
so has part: feature:1076903-1077036:1:exon
so has part: feature:1078679-1078897:1:exon

XP_032815694.1
type: Protein
SIO_000068: ncbiprotein

position:1060788:1
position: 1060788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078897:1
position: 1078897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1060788-1060941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061819-1061979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062443-1062553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1063613-1063780:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1064765-1064932:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1075082-1075199:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1076903-1077036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1078679-1078897:1:exon

LOC116945478
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945478
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-1-like
translation: MLLDDDIFISTTNTSSQENVISTEAPQPNTFSLVQNTMLPPIKNGSPFKIPFPYWMLITSAAVAALFSLVCCCCIWKSCCSKKKEKEKNTLKLKEPKKPKMFKNKVQPDLEDIDPGFIEDIYKENTLGRLQFSLDYNLKTSQFTVGILQATDLAAMDIGGMSDPYVRVYLLPHKKKKFETSVHRKTLNPIFEEKFTFTVPFEELVERVLVMVVYDFDRFSRHDIIGELRIPLSSVDLSHSVEEWRDLQKTEKDDQDRLGDICFSLRYIPSTGKLTIVILEAKNLKVMDVSGASDPYVKIQVMEGGIRLKKKKTTVKKKALNPYFNEAFSFDIPFENIEKIQLVFSVMDYDSLSRNDAIGKVYVGCGAAGAGHRHWSDMLANPRRPITQWHTLQPVEEVKASLGKLDTPLP
SIO_010081: LOC116945478
subclass of: SO_0000673
so part of: LOC116945478
location: join(1060788..1060941,1061819..1061979,1062443..1062553,1063613..1063780,1064765..1064932,1075082..1075199,1076903..1077036,1078679..1078897)
location: region:1060788-1078897:1
so has part: feature:1060788-1060941:1:exon
so has part: feature:1061819-1061979:1:exon
so has part: feature:1062443-1062553:1:exon
so has part: feature:1063613-1063780:1:exon
so has part: feature:1064765-1064932:1:exon
so has part: feature:1075082-1075199:1:exon
so has part: feature:1076903-1077036:1:exon
so has part: feature:1078679-1078897:1:exon

XP_032815695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1060788-1060941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061819-1061979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062443-1062553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1063613-1063780:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1064765-1064932:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1075082-1075199:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1076903-1077036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1078679-1078897:1:exon

LOC116945478
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945478
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-1-like
translation: MLLDDDIFISTTNTSSQENVISTEAPQPNTFSLVQNTMLPPIKNGSPFKIPFPYWMLITSAAVAALFSLVCCCCIWKSCCSKKKEKEKNTLKLKEPKKPKMFKNKVQPDLEDIDPGFIEDIYKENTLGRLQFSLDYNLKTSQFTVGILQATDLAAMDIGGMSDPYVRVYLLPHKKKKFETSVHRKTLNPIFEEKFTFTVPFEELVERVLVMVVYDFDRFSRHDIIGELRIPLSSVDLSHSVEEWRDLQKTEKDDQDRLGDICFSLRYIPSTGKLTIVILEAKNLKVMDVSGASDPYVKIQVMEGGIRLKKKKTTVKKKALNPYFNEAFSFDIPFENIEKIQLVFSVMDYDSLSRNDAIGKVYVGCGAAGAGHRHWSDMLANPRRPITQWHTLQPVEEVKASLGKLDTPLP
SIO_010081: LOC116945478
subclass of: SO_0000673
so part of: LOC116945478
location: join(1060788..1060941,1061819..1061979,1062443..1062553,1063613..1063780,1064765..1064932,1075082..1075199,1076903..1077036,1078679..1078897)
location: region:1060788-1078897:1
so has part: feature:1060788-1060941:1:exon
so has part: feature:1061819-1061979:1:exon
so has part: feature:1062443-1062553:1:exon
so has part: feature:1063613-1063780:1:exon
so has part: feature:1064765-1064932:1:exon
so has part: feature:1075082-1075199:1:exon
so has part: feature:1076903-1077036:1:exon
so has part: feature:1078679-1078897:1:exon

XP_032815696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1060788-1060941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061819-1061979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062443-1062553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1063613-1063780:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1064765-1064932:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1075082-1075199:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1076903-1077036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1078679-1078897:1:exon

LOC116945479
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945479
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1079317..1111589
location: region:1079317-1111589:1
so has part: feature:1079317-1111589:1:exon
subclass of: SO_0000010

116945479
type: Gene
SIO_000068: ncbigene

position:1079317:1
position: 1079317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1111589:1
position: 1111589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1079317-1111589:1:exon

LOC116945479
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945479
product: toll-like receptor 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032959807.1
SIO_010081: LOC116945479
subclass of: SO_0000673
so part of: LOC116945479
location: join(1079317..1082404,1084937..1085028,1085339..1085633,1110682..1111589)
location: region:1079317-1111589:1
so has part: feature:1079317-1082404:1:exon
so has part: feature:1084937-1085028:1:exon
so has part: feature:1085339-1085633:1:exon
so has part: feature:1110682-1111589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1079317-1082404:1:exon

position:1082404:1
position: 1082404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1084937-1085028:1:exon

position:1084937:1
position: 1084937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085028:1
position: 1085028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1085339-1085633:1:exon

position:1085339:1
position: 1085339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085633:1
position: 1085633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1110682-1111589:1:exon

position:1110682:1
position: 1110682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945479
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945479
product: toll-like receptor 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032959806.1
SIO_010081: LOC116945479
subclass of: SO_0000673
so part of: LOC116945479
location: join(1079317..1082404,1085339..1085633,1110682..1111589)
location: region:1079317-1111589:1
so has part: feature:1079317-1082404:1:exon
so has part: feature:1085339-1085633:1:exon
so has part: feature:1110682-1111589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1079317-1082404:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1085339-1085633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1110682-1111589:1:exon

LOC116945479
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945479
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll-like receptor 7
translation: MKTDLKWRDMKLIFFLCLLNGVPAAGKHPEIRRWWPSTLPCDVKVSQKTNTSDADIKLSCDNRNLYNVPKNIPANTTILILSDNNIKLVQREHFFDCKVSLKELDLSGNCWRMYHQNLPSTHCNHTFTIEEDAFVDLLNLTSLSLNRNSLILIPKKLPSSLKSLWLEFNHITTLRSGDFSGLHNLQNLHLCCNCYLSNACYKSFNISQDVFTLPNLTFIDLSNNNLTDVKLNLSTTIRNLVIGNNDIRKLRRQYFHGMMHLESLDVALNCPRCITASFPCKQCPNNEPLDIDTFIFSDMPLLTHIDLASTSLKKIPPQLFENNTHMTYLDLSYNYLGGEIENGIFLNYLQRIEHLNLSFNYYFEKYPVELKLSSNFANLTYLK
SIO_010081: LOC116945479
subclass of: SO_0000673
so part of: LOC116945479
location: join(1085340..1085633,1110682..1111539)
location: region:1085340-1111539:1
so has part: feature:1085340-1085633:1:exon
so has part: feature:1110682-1111539:1:exon

XP_032815697.1
type: Protein
SIO_000068: ncbiprotein

position:1085340:1
position: 1085340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1111539:1
position: 1111539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1085340-1085633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1110682-1111539:1:exon

LOC116945479
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945479
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll-like receptor 7
translation: MKTDLKWRDMKLIFFLCLLNGVPAAGKHPEIRRWWPSTLPCDVKVSQKTNTSDADIKLSCDNRNLYNVPKNIPANTTILILSDNNIKLVQREHFFDCKVSLKELDLSGNCWRMYHQNLPSTHCNHTFTIEEDAFVDLLNLTSLSLNRNSLILIPKKLPSSLKSLWLEFNHITTLRSGDFSGLHNLQNLHLCCNCYLSNACYKSFNISQDVFTLPNLTFIDLSNNNLTDVKLNLSTTIRNLVIGNNDIRKLRRQYFHGMMHLESLDVALNCPRCITASFPCKQCPNNEPLDIDTFIFSDMPLLTHIDLASTSLKKIPPQLFENNTHMTYLDLSYNYLGGEIENGIFLNYLQRIEHLNLSFNYYFEKYPVELKLSSNFANLTYLK
SIO_010081: LOC116945479
subclass of: SO_0000673
so part of: LOC116945479
location: join(1085340..1085633,1110682..1111539)
location: region:1085340-1111539:1
so has part: feature:1085340-1085633:1:exon
so has part: feature:1110682-1111539:1:exon

XP_032815698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1085340-1085633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1110682-1111539:1:exon

LOC116945480
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945480
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1111744..1112784
location: region:1111744-1112784:1
so has part: feature:1111744-1112784:1:exon
subclass of: SO_0000010

116945480
type: Gene
SIO_000068: ncbigene

position:1111744:1
position: 1111744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112784:1
position: 1112784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1111744-1112784:1:exon

LOC116945480
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945480
product: toll-like receptor 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032959808.1
SIO_010081: LOC116945480
subclass of: SO_0000673
so part of: LOC116945480
location: 1111744..1112784
location: region:1111744-1112784:1
so has part: feature:1111744-1112784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1111744-1112784:1:exon

LOC116945480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945480
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll-like receptor 8
translation: MYNKVLDLGNNSIFFIQKNYFHDMGNIECLVLSRNCINQALNGTEFSNLPKLKYLDLSYNRISLVFNTAFSELPYLEVLDLSYNQYYFSLDGLVHSINFISGMSALTELRLVGNGIRSLSTDSPLYSNTLKTLNFQGNRLDILWEDGKHFNLFENFTQLQNLDISHNKIRFILKNSVFVHLKKTESVKH
SIO_010081: LOC116945480
subclass of: SO_0000673
so part of: LOC116945480
location: 1111849..1112418
location: region:1111849-1112418:1
so has part: feature:1111849-1112418:1:exon

XP_032815699.1
type: Protein
SIO_000068: ncbiprotein

position:1111849:1
position: 1111849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112418:1
position: 1112418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1111849-1112418:1:exon

LOC116945481
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945481
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1137470..1148485)
location: region:1137470-1148485:-1
so has part: feature:1137470-1148485:-1:exon
subclass of: SO_0000010

116945481
type: Gene
SIO_000068: ncbigene

position:1137470:-1
position: 1137470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148485:-1
position: 1148485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1137470-1148485:-1:exon

LOC116945481
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945481
product: CD109 antigen-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032959809.1
SIO_010081: LOC116945481
subclass of: SO_0000673
so part of: LOC116945481
location: complement(join(1137470..1139555,1143236..1143338,1143463..1143607,1144663..1144814,1145668..1145733,1146302..1146454,1148287..1148485))
location: region:1137470-1148485:-1
so has part: feature:1148287-1148485:-1:exon
so has part: feature:1146302-1146454:-1:exon
so has part: feature:1145668-1145733:-1:exon
so has part: feature:1144663-1144814:-1:exon
so has part: feature:1143463-1143607:-1:exon
so has part: feature:1143236-1143338:-1:exon
so has part: feature:1137470-1139555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1148287-1148485:-1:exon

position:1148287:-1
position: 1148287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1146302-1146454:-1:exon

position:1146302:-1
position: 1146302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146454:-1
position: 1146454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1145668-1145733:-1:exon

position:1145668:-1
position: 1145668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145733:-1
position: 1145733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1144663-1144814:-1:exon

position:1144663:-1
position: 1144663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144814:-1
position: 1144814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1143463-1143607:-1:exon

position:1143463:-1
position: 1143463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143607:-1
position: 1143607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1143236-1143338:-1:exon

position:1143236:-1
position: 1143236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143338:-1
position: 1143338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1137470-1139555:-1:exon

position:1139555:-1
position: 1139555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945481
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945481
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD109 antigen-like
translation: MNWLSQQRNHLGGYASTQDTIVALQALSEFAVLQFGKVSGSLTVSTALPSSSITVQLSGMNATDKRIVKISTSSNLNVTLSGTGNGQVIAQLNVFYNLRDSPVVRRARSAAPSPSYELDVYFEDTGVNGSIGEQVVLTACTRWMGQDASGMALMETNLLSGFLGDDKIALTDNLKLVETSTGKIHLYFVNLNENSTCVNITQHRVAPVAKTMEALVSISDYYEPRTRVEMQYKSLKLSNITLQSLCGENCTFQSNVLANTTTAKASGIMSGSGMNPFLWFLMPAAFYLSWMGL
SIO_010081: LOC116945481
subclass of: SO_0000673
so part of: LOC116945481
location: complement(join(1139347..1139555,1143236..1143338,1143463..1143607,1144663..1144814,1145668..1145733,1146302..1146454,1148287..1148340))
location: region:1139347-1148340:-1
so has part: feature:1148287-1148340:-1:exon
so has part: feature:1146302-1146454:-1:exon
so has part: feature:1145668-1145733:-1:exon
so has part: feature:1144663-1144814:-1:exon
so has part: feature:1143463-1143607:-1:exon
so has part: feature:1143236-1143338:-1:exon
so has part: feature:1139347-1139555:-1:exon

XP_032815700.1
type: Protein
SIO_000068: ncbiprotein

position:1139347:-1
position: 1139347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148340:-1
position: 1148340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1148287-1148340:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1146302-1146454:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1145668-1145733:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144663-1144814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1143463-1143607:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1143236-1143338:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1139347-1139555:-1:exon

LOC116945482
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945482
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1155066..1164725)
location: region:1155066-1164725:-1
so has part: feature:1155066-1164725:-1:exon
subclass of: SO_0000010

116945482
type: Gene
SIO_000068: ncbigene

position:1155066:-1
position: 1155066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164725:-1
position: 1164725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1155066-1164725:-1:exon

LOC116945482
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945482
product: CD109 antigen-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032959810.1
SIO_010081: LOC116945482
subclass of: SO_0000673
so part of: LOC116945482
location: complement(join(1155066..1155168,1156816..1156992,1164221..1164725))
location: region:1155066-1164725:-1
so has part: feature:1164221-1164725:-1:exon
so has part: feature:1156816-1156992:-1:exon
so has part: feature:1155066-1155168:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1164221-1164725:-1:exon

position:1164221:-1
position: 1164221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1156816-1156992:-1:exon

position:1156816:-1
position: 1156816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156992:-1
position: 1156992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1155066-1155168:-1:exon

position:1155168:-1
position: 1155168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945482
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945482
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD109 antigen-like
translation: MSDKWYNRLCRAFPIMQYPGFPQTYSESALLSLYENKKFTRSFVFNFPPNIVQGSSSAVLYIYGDIIGPSLTGLDQLIQMPYGCGEQNMINFAPGIYIRIYLDVSRQTTPDIAAKSLNYMNSGYERELMYRRSDGSFSAFGNSDQQGSTW
SIO_010081: LOC116945482
subclass of: SO_0000673
so part of: LOC116945482
location: complement(join(1155083..1155168,1156816..1156992,1164221..1164410))
location: region:1155083-1164410:-1
so has part: feature:1164221-1164410:-1:exon
so has part: feature:1156816-1156992:-1:exon
so has part: feature:1155083-1155168:-1:exon

XP_032815701.1
type: Protein
SIO_000068: ncbiprotein

position:1155083:-1
position: 1155083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164410:-1
position: 1164410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164221-1164410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1156816-1156992:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1155083-1155168:-1:exon

LOC116945455
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945455
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1166406..1173098)
location: region:1166406-1173098:-1
so has part: feature:1166406-1173098:-1:exon
subclass of: SO_0000011

116945455
type: Gene
SIO_000068: ncbigene

position:1166406:-1
position: 1166406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173098:-1
position: 1173098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1166406-1173098:-1:exon

LOC116945455
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116945455
product: uncharacterized LOC116945455
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004403329.1
SIO_010081: LOC116945455
subclass of: SO_0000673
so part of: LOC116945455
location: complement(join(1166406..1166667,1167523..1167636,1172422..1172539,1172836..1173098))
location: region:1166406-1173098:-1
so has part: feature:1172836-1173098:-1:exon
so has part: feature:1172422-1172539:-1:exon
so has part: feature:1167523-1167636:-1:exon
so has part: feature:1166406-1166667:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1172836-1173098:-1:exon

position:1172836:-1
position: 1172836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1172422-1172539:-1:exon

position:1172422:-1
position: 1172422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172539:-1
position: 1172539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1167523-1167636:-1:exon

position:1167523:-1
position: 1167523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167636:-1
position: 1167636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1166406-1166667:-1:exon

position:1166667:-1
position: 1166667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945483
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1190117..1221908)
location: region:1190117-1221908:-1
so has part: feature:1190117-1221908:-1:exon
subclass of: SO_0000010

116945483
type: Gene
SIO_000068: ncbigene

position:1190117:-1
position: 1190117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221908:-1
position: 1221908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1190117-1221908:-1:exon

LOC116945483
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945483
product: uncharacterized LOC116945483
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032959812.1
SIO_010081: LOC116945483
subclass of: SO_0000673
so part of: LOC116945483
location: complement(join(1190117..1190310,1192150..1192251,1193630..1193860,1194770..1194876,1196341..1196458,1200153..1200240,1201815..1201893,1204010..1204055,1204957..1205085,1205345..1205563,1205993..1206021,1211309..1211478,1220340..1221908))
location: region:1190117-1221908:-1
so has part: feature:1220340-1221908:-1:exon
so has part: feature:1211309-1211478:-1:exon
so has part: feature:1205993-1206021:-1:exon
so has part: feature:1205345-1205563:-1:exon
so has part: feature:1204957-1205085:-1:exon
so has part: feature:1204010-1204055:-1:exon
so has part: feature:1201815-1201893:-1:exon
so has part: feature:1200153-1200240:-1:exon
so has part: feature:1196341-1196458:-1:exon
so has part: feature:1194770-1194876:-1:exon
so has part: feature:1193630-1193860:-1:exon
so has part: feature:1192150-1192251:-1:exon
so has part: feature:1190117-1190310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1220340-1221908:-1:exon

position:1220340:-1
position: 1220340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1211309-1211478:-1:exon

position:1211309:-1
position: 1211309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211478:-1
position: 1211478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1205993-1206021:-1:exon

position:1205993:-1
position: 1205993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206021:-1
position: 1206021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1205345-1205563:-1:exon

position:1205345:-1
position: 1205345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205563:-1
position: 1205563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1204957-1205085:-1:exon

position:1204957:-1
position: 1204957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205085:-1
position: 1205085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1204010-1204055:-1:exon

position:1204010:-1
position: 1204010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204055:-1
position: 1204055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1201815-1201893:-1:exon

position:1201815:-1
position: 1201815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201893:-1
position: 1201893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1200153-1200240:-1:exon

position:1200153:-1
position: 1200153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200240:-1
position: 1200240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1196341-1196458:-1:exon

position:1196341:-1
position: 1196341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196458:-1
position: 1196458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1194770-1194876:-1:exon

position:1194770:-1
position: 1194770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1194876:-1
position: 1194876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1193630-1193860:-1:exon

position:1193630:-1
position: 1193630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193860:-1
position: 1193860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1192150-1192251:-1:exon

position:1192150:-1
position: 1192150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1192251:-1
position: 1192251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1190117-1190310:-1:exon

position:1190310:-1
position: 1190310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945483
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116945483
translation: MKLFILLLTATVAQSATYLATFPYWYWYAQTRSDLAMGFSLLPGPGNETLVNVTFDIPSRGIKKELDNLSVGTTTMVTFPSMLNRDWFMMNLVAKSGNQELFSTSLYTGYYPRLNIIIQCDRYFYQPGQTVQCILFGVYGNRLPYLGRFNISLQSSLGDVKKTWQNVQGEKGIVSLQYSLSETALEGYWYLQVEAEEHATNSYWNAFEVRNYVDIVLIDVPRYFDLSGSDDLSGVISAWYQGKTFKGTATVTIGPYYNSNAWITKDVNVDGNGYFTFRRSELTQLFFANTSEIYYSPISVVITDDATGMRMEKNTWVIFSKNRVEIYFYGYWRFIPGINFKSHIRLYLVDGLPLTSKDRETKLTVSVKQYISGIEQMSCPGINNGSQILDQTDANYTVPTNGIVFIDVPTSKEANFLTVEARFGEVVVCNSISAWVSFQNGSFLHVTASETNVKVGSPVSFTLKSSDSSITKVSYQVMLFCTLSYVFSYKQSNISILCGLQQQSTLGQHYLLQ
SIO_010081: LOC116945483
subclass of: SO_0000673
so part of: LOC116945483
location: complement(join(1190131..1190310,1192150..1192251,1193630..1193860,1194770..1194876,1196341..1196458,1200153..1200240,1201815..1201893,1204010..1204055,1204957..1205085,1205345..1205563,1205993..1206021,1211309..1211478,1220340..1220383))
location: region:1190131-1220383:-1
so has part: feature:1220340-1220383:-1:exon
so has part: feature:1211309-1211478:-1:exon
so has part: feature:1205993-1206021:-1:exon
so has part: feature:1205345-1205563:-1:exon
so has part: feature:1204957-1205085:-1:exon
so has part: feature:1204010-1204055:-1:exon
so has part: feature:1201815-1201893:-1:exon
so has part: feature:1200153-1200240:-1:exon
so has part: feature:1196341-1196458:-1:exon
so has part: feature:1194770-1194876:-1:exon
so has part: feature:1193630-1193860:-1:exon
so has part: feature:1192150-1192251:-1:exon
so has part: feature:1190131-1190310:-1:exon

XP_032815703.1
type: Protein
SIO_000068: ncbiprotein

position:1190131:-1
position: 1190131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1220383:-1
position: 1220383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1220340-1220383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1211309-1211478:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1205993-1206021:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1205345-1205563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1204957-1205085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1204010-1204055:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1201815-1201893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1200153-1200240:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1196341-1196458:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1194770-1194876:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1193630-1193860:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1192150-1192251:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1190131-1190310:-1:exon

PGGHG
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: PGGHG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1239864..1295989)
location: region:1239864-1295989:-1
so has part: feature:1239864-1295989:-1:exon
subclass of: SO_0000010

116945484
type: Gene
SIO_000068: ncbigene

position:1239864:-1
position: 1239864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295989:-1
position: 1295989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239864-1295989:-1:exon

PGGHG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: PGGHG
product: protein-glucosylgalactosylhydroxylysine glucosidase, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_032959823.1
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1239864..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287949,1295893..1295989))
location: region:1239864-1295989:-1
so has part: feature:1295893-1295989:-1:exon
so has part: feature:1287659-1287949:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1239864-1240472:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1295893-1295989:-1:exon

position:1295893:-1
position: 1295893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1287659-1287949:-1:exon

position:1287659:-1
position: 1287659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287949:-1
position: 1287949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1279798-1280008:-1:exon

position:1279798:-1
position: 1279798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280008:-1
position: 1280008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1277283-1277718:-1:exon

position:1277283:-1
position: 1277283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277718:-1
position: 1277718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1276876-1276995:-1:exon

position:1276876:-1
position: 1276876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276995:-1
position: 1276995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1275343-1275474:-1:exon

position:1275343:-1
position: 1275343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1275474:-1
position: 1275474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1273518-1273629:-1:exon

position:1273518:-1
position: 1273518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273629:-1
position: 1273629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1272066-1272138:-1:exon

position:1272066:-1
position: 1272066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1272138:-1
position: 1272138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1269206-1269342:-1:exon

position:1269206:-1
position: 1269206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1269342:-1
position: 1269342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1267541-1267674:-1:exon

position:1267541:-1
position: 1267541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267674:-1
position: 1267674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1265678-1265773:-1:exon

position:1265678:-1
position: 1265678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1265773:-1
position: 1265773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1246054-1246151:-1:exon

position:1246054:-1
position: 1246054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1246151:-1
position: 1246151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1243520-1243731:-1:exon

position:1243520:-1
position: 1243520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243731:-1
position: 1243731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1239864-1240472:-1:exon

position:1240472:-1
position: 1240472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PGGHG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: PGGHG
product: protein-glucosylgalactosylhydroxylysine glucosidase, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_032959822.1
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1239864..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287949,1291986..1292044,1295893..1295972))
location: region:1239864-1295972:-1
so has part: feature:1295893-1295972:-1:exon
so has part: feature:1291986-1292044:-1:exon
so has part: feature:1287659-1287949:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1239864-1240472:-1:exon

position:1295972:-1
position: 1295972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295893-1295972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1291986-1292044:-1:exon

position:1291986:-1
position: 1291986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292044:-1
position: 1292044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1287659-1287949:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1239864-1240472:-1:exon

PGGHG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: PGGHG
product: protein-glucosylgalactosylhydroxylysine glucosidase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032959814.1
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1239864..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287949,1289933..1292044,1294828..1294957,1295893..1295960))
location: region:1239864-1295960:-1
so has part: feature:1295893-1295960:-1:exon
so has part: feature:1294828-1294957:-1:exon
so has part: feature:1289933-1292044:-1:exon
so has part: feature:1287659-1287949:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1239864-1240472:-1:exon

position:1295960:-1
position: 1295960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295893-1295960:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1294828-1294957:-1:exon

position:1294828:-1
position: 1294828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1294957:-1
position: 1294957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1289933-1292044:-1:exon

position:1289933:-1
position: 1289933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1287659-1287949:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1239864-1240472:-1:exon

PGGHG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: PGGHG
product: protein-glucosylgalactosylhydroxylysine glucosidase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032959816.1
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1239864..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287949,1289933..1292044,1294842..1294926,1295893..1295946))
location: region:1239864-1295946:-1
so has part: feature:1295893-1295946:-1:exon
so has part: feature:1294842-1294926:-1:exon
so has part: feature:1289933-1292044:-1:exon
so has part: feature:1287659-1287949:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1239864-1240472:-1:exon

position:1295946:-1
position: 1295946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295893-1295946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1294842-1294926:-1:exon

position:1294842:-1
position: 1294842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1294926:-1
position: 1294926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1289933-1292044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1287659-1287949:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1239864-1240472:-1:exon

PGGHG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: PGGHG
product: protein-glucosylgalactosylhydroxylysine glucosidase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032959817.1
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1239864..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287949,1289933..1292044,1294828..1294926,1295893..1295946))
location: region:1239864-1295946:-1
so has part: feature:1295893-1295946:-1:exon
so has part: feature:1294828-1294926:-1:exon
so has part: feature:1289933-1292044:-1:exon
so has part: feature:1287659-1287949:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1239864-1240472:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1295893-1295946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1294828-1294926:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1289933-1292044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1287659-1287949:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1239864-1240472:-1:exon

PGGHG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: PGGHG
product: protein-glucosylgalactosylhydroxylysine glucosidase, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032959818.1
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1239864..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287949,1289933..1292044,1295893..1295944))
location: region:1239864-1295944:-1
so has part: feature:1295893-1295944:-1:exon
so has part: feature:1289933-1292044:-1:exon
so has part: feature:1287659-1287949:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1239864-1240472:-1:exon

position:1295944:-1
position: 1295944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295893-1295944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1289933-1292044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287659-1287949:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1239864-1240472:-1:exon

PGGHG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: PGGHG
product: protein-glucosylgalactosylhydroxylysine glucosidase, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032959819.1
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1239864..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287949,1289933..1290217,1291986..1292044,1295893..1295938))
location: region:1239864-1295938:-1
so has part: feature:1295893-1295938:-1:exon
so has part: feature:1291986-1292044:-1:exon
so has part: feature:1289933-1290217:-1:exon
so has part: feature:1287659-1287949:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1239864-1240472:-1:exon

position:1295938:-1
position: 1295938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295893-1295938:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1291986-1292044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1289933-1290217:-1:exon

position:1290217:-1
position: 1290217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1287659-1287949:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1239864-1240472:-1:exon

PGGHG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: PGGHG
product: protein-glucosylgalactosylhydroxylysine glucosidase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032959815.1
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1239864..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287949,1289933..1290217,1291986..1292044,1294842..1295120))
location: region:1239864-1295120:-1
so has part: feature:1294842-1295120:-1:exon
so has part: feature:1291986-1292044:-1:exon
so has part: feature:1289933-1290217:-1:exon
so has part: feature:1287659-1287949:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1239864-1240472:-1:exon

position:1295120:-1
position: 1295120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294842-1295120:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1291986-1292044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1289933-1290217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1287659-1287949:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1239864-1240472:-1:exon

PGGHG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: PGGHG
product: protein-glucosylgalactosylhydroxylysine glucosidase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032959813.1
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1239864..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287949,1289933..1290217,1291986..1292044,1294828..1295120))
location: region:1239864-1295120:-1
so has part: feature:1294828-1295120:-1:exon
so has part: feature:1291986-1292044:-1:exon
so has part: feature:1289933-1290217:-1:exon
so has part: feature:1287659-1287949:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1239864-1240472:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294828-1295120:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1291986-1292044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1289933-1290217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1287659-1287949:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1239864-1240472:-1:exon

PGGHG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: PGGHG
product: protein-glucosylgalactosylhydroxylysine glucosidase, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_032959821.1
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1239864..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287949,1291986..1292044,1294842..1295119))
location: region:1239864-1295119:-1
so has part: feature:1294842-1295119:-1:exon
so has part: feature:1291986-1292044:-1:exon
so has part: feature:1287659-1287949:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1239864-1240472:-1:exon

position:1295119:-1
position: 1295119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294842-1295119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1291986-1292044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287659-1287949:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1239864-1240472:-1:exon

PGGHG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: PGGHG
product: protein-glucosylgalactosylhydroxylysine glucosidase, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032959820.1
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1239864..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287949,1291986..1292044,1294828..1295119))
location: region:1239864-1295119:-1
so has part: feature:1294828-1295119:-1:exon
so has part: feature:1291986-1292044:-1:exon
so has part: feature:1287659-1287949:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1239864-1240472:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294828-1295119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1291986-1292044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287659-1287949:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1239864-1240472:-1:exon

PGGHG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: PGGHG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-glucosylgalactosylhydroxylysine glucosidase isoform X1
translation: MFLKGYALTQAFVVCVGLSMETPRKDPAVFVASQLPSDARFMAVLANGYLGTQVYGRSLHMGDVYNGNGTQSHRAHIPSTLNVLLSNTGPGELLYGLNTRKGVFECVLKSEHMLVVQRMYAHRSRRNLLVHSVHMQRTGPDLSPLHLNLSSSFTPFSEDIDFKEGSAFLEARYIYGEIHAPEGKECSKTTVHMVWTPVPTCLELPAGQIVKKWTFLTALSTDESEAKAEYRAGLRAAETRELYHTHKAAWSQLWAASCIDMTGDFYLTQVLYACMFYMLSALPSASTLDYPFFGVSPGGLSNGERNEDYLGHIFWDQETWMYPVALLFHPRVARTMLEYRVARLGAARENSRAAGHRGAKYPWESAVAGHEVCPEDIYGQQEIHINGDVSFAFQQYFLVTQDLNFFSQLGGWDVVKSIAEYWKSRVEWNKSEKCYDINNVMPPDEYHNGVKNSVYTNVVAKYSLDFASDLGELLKVPVPPKWKDISSKLKIPIDHEKNYHPEYDGYNLGESVKQADVILLGFPLGFPMSAQMRKNDLELYEEVTDHDGPAMTWSMFAVGWLEMNDSKKAKEMITRCYQNIHEPFKVWSENPDGSGAVNFLTGMGGFLQANLFGYFGIRITKEGLKFNPNIPENVSEGVVTGLAYLGNKITFSATVANVVLTVTAIDEASHTQLEVVVSSTEKVFPLLLKKPVAFPTSSGRIQMLH
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1240420..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287949,1289933..1289945))
location: region:1240420-1289945:-1
so has part: feature:1289933-1289945:-1:exon
so has part: feature:1287659-1287949:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1240420-1240472:-1:exon

XP_032815704.1
type: Protein
SIO_000068: ncbiprotein

position:1240420:-1
position: 1240420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1289945:-1
position: 1289945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1289933-1289945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287659-1287949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1240420-1240472:-1:exon

PGGHG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: PGGHG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-glucosylgalactosylhydroxylysine glucosidase isoform X1
translation: MFLKGYALTQAFVVCVGLSMETPRKDPAVFVASQLPSDARFMAVLANGYLGTQVYGRSLHMGDVYNGNGTQSHRAHIPSTLNVLLSNTGPGELLYGLNTRKGVFECVLKSEHMLVVQRMYAHRSRRNLLVHSVHMQRTGPDLSPLHLNLSSSFTPFSEDIDFKEGSAFLEARYIYGEIHAPEGKECSKTTVHMVWTPVPTCLELPAGQIVKKWTFLTALSTDESEAKAEYRAGLRAAETRELYHTHKAAWSQLWAASCIDMTGDFYLTQVLYACMFYMLSALPSASTLDYPFFGVSPGGLSNGERNEDYLGHIFWDQETWMYPVALLFHPRVARTMLEYRVARLGAARENSRAAGHRGAKYPWESAVAGHEVCPEDIYGQQEIHINGDVSFAFQQYFLVTQDLNFFSQLGGWDVVKSIAEYWKSRVEWNKSEKCYDINNVMPPDEYHNGVKNSVYTNVVAKYSLDFASDLGELLKVPVPPKWKDISSKLKIPIDHEKNYHPEYDGYNLGESVKQADVILLGFPLGFPMSAQMRKNDLELYEEVTDHDGPAMTWSMFAVGWLEMNDSKKAKEMITRCYQNIHEPFKVWSENPDGSGAVNFLTGMGGFLQANLFGYFGIRITKEGLKFNPNIPENVSEGVVTGLAYLGNKITFSATVANVVLTVTAIDEASHTQLEVVVSSTEKVFPLLLKKPVAFPTSSGRIQMLH
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1240420..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287949,1289933..1289945))
location: region:1240420-1289945:-1
so has part: feature:1289933-1289945:-1:exon
so has part: feature:1287659-1287949:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1240420-1240472:-1:exon

XP_032815705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1289933-1289945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287659-1287949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1240420-1240472:-1:exon

PGGHG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: PGGHG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-glucosylgalactosylhydroxylysine glucosidase isoform X1
translation: MFLKGYALTQAFVVCVGLSMETPRKDPAVFVASQLPSDARFMAVLANGYLGTQVYGRSLHMGDVYNGNGTQSHRAHIPSTLNVLLSNTGPGELLYGLNTRKGVFECVLKSEHMLVVQRMYAHRSRRNLLVHSVHMQRTGPDLSPLHLNLSSSFTPFSEDIDFKEGSAFLEARYIYGEIHAPEGKECSKTTVHMVWTPVPTCLELPAGQIVKKWTFLTALSTDESEAKAEYRAGLRAAETRELYHTHKAAWSQLWAASCIDMTGDFYLTQVLYACMFYMLSALPSASTLDYPFFGVSPGGLSNGERNEDYLGHIFWDQETWMYPVALLFHPRVARTMLEYRVARLGAARENSRAAGHRGAKYPWESAVAGHEVCPEDIYGQQEIHINGDVSFAFQQYFLVTQDLNFFSQLGGWDVVKSIAEYWKSRVEWNKSEKCYDINNVMPPDEYHNGVKNSVYTNVVAKYSLDFASDLGELLKVPVPPKWKDISSKLKIPIDHEKNYHPEYDGYNLGESVKQADVILLGFPLGFPMSAQMRKNDLELYEEVTDHDGPAMTWSMFAVGWLEMNDSKKAKEMITRCYQNIHEPFKVWSENPDGSGAVNFLTGMGGFLQANLFGYFGIRITKEGLKFNPNIPENVSEGVVTGLAYLGNKITFSATVANVVLTVTAIDEASHTQLEVVVSSTEKVFPLLLKKPVAFPTSSGRIQMLH
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1240420..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287949,1289933..1289945))
location: region:1240420-1289945:-1
so has part: feature:1289933-1289945:-1:exon
so has part: feature:1287659-1287949:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1240420-1240472:-1:exon

XP_032815706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1289933-1289945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287659-1287949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1240420-1240472:-1:exon

PGGHG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: PGGHG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-glucosylgalactosylhydroxylysine glucosidase isoform X1
translation: MFLKGYALTQAFVVCVGLSMETPRKDPAVFVASQLPSDARFMAVLANGYLGTQVYGRSLHMGDVYNGNGTQSHRAHIPSTLNVLLSNTGPGELLYGLNTRKGVFECVLKSEHMLVVQRMYAHRSRRNLLVHSVHMQRTGPDLSPLHLNLSSSFTPFSEDIDFKEGSAFLEARYIYGEIHAPEGKECSKTTVHMVWTPVPTCLELPAGQIVKKWTFLTALSTDESEAKAEYRAGLRAAETRELYHTHKAAWSQLWAASCIDMTGDFYLTQVLYACMFYMLSALPSASTLDYPFFGVSPGGLSNGERNEDYLGHIFWDQETWMYPVALLFHPRVARTMLEYRVARLGAARENSRAAGHRGAKYPWESAVAGHEVCPEDIYGQQEIHINGDVSFAFQQYFLVTQDLNFFSQLGGWDVVKSIAEYWKSRVEWNKSEKCYDINNVMPPDEYHNGVKNSVYTNVVAKYSLDFASDLGELLKVPVPPKWKDISSKLKIPIDHEKNYHPEYDGYNLGESVKQADVILLGFPLGFPMSAQMRKNDLELYEEVTDHDGPAMTWSMFAVGWLEMNDSKKAKEMITRCYQNIHEPFKVWSENPDGSGAVNFLTGMGGFLQANLFGYFGIRITKEGLKFNPNIPENVSEGVVTGLAYLGNKITFSATVANVVLTVTAIDEASHTQLEVVVSSTEKVFPLLLKKPVAFPTSSGRIQMLH
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1240420..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287949,1289933..1289945))
location: region:1240420-1289945:-1
so has part: feature:1289933-1289945:-1:exon
so has part: feature:1287659-1287949:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1240420-1240472:-1:exon

XP_032815707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1289933-1289945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287659-1287949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1240420-1240472:-1:exon

PGGHG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: PGGHG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-glucosylgalactosylhydroxylysine glucosidase isoform X1
translation: MFLKGYALTQAFVVCVGLSMETPRKDPAVFVASQLPSDARFMAVLANGYLGTQVYGRSLHMGDVYNGNGTQSHRAHIPSTLNVLLSNTGPGELLYGLNTRKGVFECVLKSEHMLVVQRMYAHRSRRNLLVHSVHMQRTGPDLSPLHLNLSSSFTPFSEDIDFKEGSAFLEARYIYGEIHAPEGKECSKTTVHMVWTPVPTCLELPAGQIVKKWTFLTALSTDESEAKAEYRAGLRAAETRELYHTHKAAWSQLWAASCIDMTGDFYLTQVLYACMFYMLSALPSASTLDYPFFGVSPGGLSNGERNEDYLGHIFWDQETWMYPVALLFHPRVARTMLEYRVARLGAARENSRAAGHRGAKYPWESAVAGHEVCPEDIYGQQEIHINGDVSFAFQQYFLVTQDLNFFSQLGGWDVVKSIAEYWKSRVEWNKSEKCYDINNVMPPDEYHNGVKNSVYTNVVAKYSLDFASDLGELLKVPVPPKWKDISSKLKIPIDHEKNYHPEYDGYNLGESVKQADVILLGFPLGFPMSAQMRKNDLELYEEVTDHDGPAMTWSMFAVGWLEMNDSKKAKEMITRCYQNIHEPFKVWSENPDGSGAVNFLTGMGGFLQANLFGYFGIRITKEGLKFNPNIPENVSEGVVTGLAYLGNKITFSATVANVVLTVTAIDEASHTQLEVVVSSTEKVFPLLLKKPVAFPTSSGRIQMLH
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1240420..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287949,1289933..1289945))
location: region:1240420-1289945:-1
so has part: feature:1289933-1289945:-1:exon
so has part: feature:1287659-1287949:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1240420-1240472:-1:exon

XP_032815708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1289933-1289945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287659-1287949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1240420-1240472:-1:exon

PGGHG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: PGGHG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-glucosylgalactosylhydroxylysine glucosidase isoform X1
translation: MFLKGYALTQAFVVCVGLSMETPRKDPAVFVASQLPSDARFMAVLANGYLGTQVYGRSLHMGDVYNGNGTQSHRAHIPSTLNVLLSNTGPGELLYGLNTRKGVFECVLKSEHMLVVQRMYAHRSRRNLLVHSVHMQRTGPDLSPLHLNLSSSFTPFSEDIDFKEGSAFLEARYIYGEIHAPEGKECSKTTVHMVWTPVPTCLELPAGQIVKKWTFLTALSTDESEAKAEYRAGLRAAETRELYHTHKAAWSQLWAASCIDMTGDFYLTQVLYACMFYMLSALPSASTLDYPFFGVSPGGLSNGERNEDYLGHIFWDQETWMYPVALLFHPRVARTMLEYRVARLGAARENSRAAGHRGAKYPWESAVAGHEVCPEDIYGQQEIHINGDVSFAFQQYFLVTQDLNFFSQLGGWDVVKSIAEYWKSRVEWNKSEKCYDINNVMPPDEYHNGVKNSVYTNVVAKYSLDFASDLGELLKVPVPPKWKDISSKLKIPIDHEKNYHPEYDGYNLGESVKQADVILLGFPLGFPMSAQMRKNDLELYEEVTDHDGPAMTWSMFAVGWLEMNDSKKAKEMITRCYQNIHEPFKVWSENPDGSGAVNFLTGMGGFLQANLFGYFGIRITKEGLKFNPNIPENVSEGVVTGLAYLGNKITFSATVANVVLTVTAIDEASHTQLEVVVSSTEKVFPLLLKKPVAFPTSSGRIQMLH
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1240420..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287949,1289933..1289945))
location: region:1240420-1289945:-1
so has part: feature:1289933-1289945:-1:exon
so has part: feature:1287659-1287949:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1240420-1240472:-1:exon

XP_032815709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1289933-1289945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287659-1287949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1240420-1240472:-1:exon

PGGHG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: PGGHG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-glucosylgalactosylhydroxylysine glucosidase isoform X1
translation: MFLKGYALTQAFVVCVGLSMETPRKDPAVFVASQLPSDARFMAVLANGYLGTQVYGRSLHMGDVYNGNGTQSHRAHIPSTLNVLLSNTGPGELLYGLNTRKGVFECVLKSEHMLVVQRMYAHRSRRNLLVHSVHMQRTGPDLSPLHLNLSSSFTPFSEDIDFKEGSAFLEARYIYGEIHAPEGKECSKTTVHMVWTPVPTCLELPAGQIVKKWTFLTALSTDESEAKAEYRAGLRAAETRELYHTHKAAWSQLWAASCIDMTGDFYLTQVLYACMFYMLSALPSASTLDYPFFGVSPGGLSNGERNEDYLGHIFWDQETWMYPVALLFHPRVARTMLEYRVARLGAARENSRAAGHRGAKYPWESAVAGHEVCPEDIYGQQEIHINGDVSFAFQQYFLVTQDLNFFSQLGGWDVVKSIAEYWKSRVEWNKSEKCYDINNVMPPDEYHNGVKNSVYTNVVAKYSLDFASDLGELLKVPVPPKWKDISSKLKIPIDHEKNYHPEYDGYNLGESVKQADVILLGFPLGFPMSAQMRKNDLELYEEVTDHDGPAMTWSMFAVGWLEMNDSKKAKEMITRCYQNIHEPFKVWSENPDGSGAVNFLTGMGGFLQANLFGYFGIRITKEGLKFNPNIPENVSEGVVTGLAYLGNKITFSATVANVVLTVTAIDEASHTQLEVVVSSTEKVFPLLLKKPVAFPTSSGRIQMLH
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1240420..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287949,1289933..1289945))
location: region:1240420-1289945:-1
so has part: feature:1289933-1289945:-1:exon
so has part: feature:1287659-1287949:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1240420-1240472:-1:exon

XP_032815710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1289933-1289945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287659-1287949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1240420-1240472:-1:exon

PGGHG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: PGGHG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-glucosylgalactosylhydroxylysine glucosidase isoform X2
translation: METPRKDPAVFVASQLPSDARFMAVLANGYLGTQVYGRSLHMGDVYNGNGTQSHRAHIPSTLNVLLSNTGPGELLYGLNTRKGVFECVLKSEHMLVVQRMYAHRSRRNLLVHSVHMQRTGPDLSPLHLNLSSSFTPFSEDIDFKEGSAFLEARYIYGEIHAPEGKECSKTTVHMVWTPVPTCLELPAGQIVKKWTFLTALSTDESEAKAEYRAGLRAAETRELYHTHKAAWSQLWAASCIDMTGDFYLTQVLYACMFYMLSALPSASTLDYPFFGVSPGGLSNGERNEDYLGHIFWDQETWMYPVALLFHPRVARTMLEYRVARLGAARENSRAAGHRGAKYPWESAVAGHEVCPEDIYGQQEIHINGDVSFAFQQYFLVTQDLNFFSQLGGWDVVKSIAEYWKSRVEWNKSEKCYDINNVMPPDEYHNGVKNSVYTNVVAKYSLDFASDLGELLKVPVPPKWKDISSKLKIPIDHEKNYHPEYDGYNLGESVKQADVILLGFPLGFPMSAQMRKNDLELYEEVTDHDGPAMTWSMFAVGWLEMNDSKKAKEMITRCYQNIHEPFKVWSENPDGSGAVNFLTGMGGFLQANLFGYFGIRITKEGLKFNPNIPENVSEGVVTGLAYLGNKITFSATVANVVLTVTAIDEASHTQLEVVVSSTEKVFPLLLKKPVAFPTSSGRIQMLH
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1240420..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287905))
location: region:1240420-1287905:-1
so has part: feature:1287659-1287905:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1240420-1240472:-1:exon

XP_032815711.1
type: Protein
SIO_000068: ncbiprotein

position:1287905:-1
position: 1287905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1287659-1287905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1240420-1240472:-1:exon

PGGHG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: PGGHG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-glucosylgalactosylhydroxylysine glucosidase isoform X2
translation: METPRKDPAVFVASQLPSDARFMAVLANGYLGTQVYGRSLHMGDVYNGNGTQSHRAHIPSTLNVLLSNTGPGELLYGLNTRKGVFECVLKSEHMLVVQRMYAHRSRRNLLVHSVHMQRTGPDLSPLHLNLSSSFTPFSEDIDFKEGSAFLEARYIYGEIHAPEGKECSKTTVHMVWTPVPTCLELPAGQIVKKWTFLTALSTDESEAKAEYRAGLRAAETRELYHTHKAAWSQLWAASCIDMTGDFYLTQVLYACMFYMLSALPSASTLDYPFFGVSPGGLSNGERNEDYLGHIFWDQETWMYPVALLFHPRVARTMLEYRVARLGAARENSRAAGHRGAKYPWESAVAGHEVCPEDIYGQQEIHINGDVSFAFQQYFLVTQDLNFFSQLGGWDVVKSIAEYWKSRVEWNKSEKCYDINNVMPPDEYHNGVKNSVYTNVVAKYSLDFASDLGELLKVPVPPKWKDISSKLKIPIDHEKNYHPEYDGYNLGESVKQADVILLGFPLGFPMSAQMRKNDLELYEEVTDHDGPAMTWSMFAVGWLEMNDSKKAKEMITRCYQNIHEPFKVWSENPDGSGAVNFLTGMGGFLQANLFGYFGIRITKEGLKFNPNIPENVSEGVVTGLAYLGNKITFSATVANVVLTVTAIDEASHTQLEVVVSSTEKVFPLLLKKPVAFPTSSGRIQMLH
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1240420..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287905))
location: region:1240420-1287905:-1
so has part: feature:1287659-1287905:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1240420-1240472:-1:exon

XP_032815712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1287659-1287905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1240420-1240472:-1:exon

PGGHG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: PGGHG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-glucosylgalactosylhydroxylysine glucosidase isoform X2
translation: METPRKDPAVFVASQLPSDARFMAVLANGYLGTQVYGRSLHMGDVYNGNGTQSHRAHIPSTLNVLLSNTGPGELLYGLNTRKGVFECVLKSEHMLVVQRMYAHRSRRNLLVHSVHMQRTGPDLSPLHLNLSSSFTPFSEDIDFKEGSAFLEARYIYGEIHAPEGKECSKTTVHMVWTPVPTCLELPAGQIVKKWTFLTALSTDESEAKAEYRAGLRAAETRELYHTHKAAWSQLWAASCIDMTGDFYLTQVLYACMFYMLSALPSASTLDYPFFGVSPGGLSNGERNEDYLGHIFWDQETWMYPVALLFHPRVARTMLEYRVARLGAARENSRAAGHRGAKYPWESAVAGHEVCPEDIYGQQEIHINGDVSFAFQQYFLVTQDLNFFSQLGGWDVVKSIAEYWKSRVEWNKSEKCYDINNVMPPDEYHNGVKNSVYTNVVAKYSLDFASDLGELLKVPVPPKWKDISSKLKIPIDHEKNYHPEYDGYNLGESVKQADVILLGFPLGFPMSAQMRKNDLELYEEVTDHDGPAMTWSMFAVGWLEMNDSKKAKEMITRCYQNIHEPFKVWSENPDGSGAVNFLTGMGGFLQANLFGYFGIRITKEGLKFNPNIPENVSEGVVTGLAYLGNKITFSATVANVVLTVTAIDEASHTQLEVVVSSTEKVFPLLLKKPVAFPTSSGRIQMLH
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1240420..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287905))
location: region:1240420-1287905:-1
so has part: feature:1287659-1287905:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1240420-1240472:-1:exon

XP_032815713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1287659-1287905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1240420-1240472:-1:exon

PGGHG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: PGGHG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-glucosylgalactosylhydroxylysine glucosidase isoform X2
translation: METPRKDPAVFVASQLPSDARFMAVLANGYLGTQVYGRSLHMGDVYNGNGTQSHRAHIPSTLNVLLSNTGPGELLYGLNTRKGVFECVLKSEHMLVVQRMYAHRSRRNLLVHSVHMQRTGPDLSPLHLNLSSSFTPFSEDIDFKEGSAFLEARYIYGEIHAPEGKECSKTTVHMVWTPVPTCLELPAGQIVKKWTFLTALSTDESEAKAEYRAGLRAAETRELYHTHKAAWSQLWAASCIDMTGDFYLTQVLYACMFYMLSALPSASTLDYPFFGVSPGGLSNGERNEDYLGHIFWDQETWMYPVALLFHPRVARTMLEYRVARLGAARENSRAAGHRGAKYPWESAVAGHEVCPEDIYGQQEIHINGDVSFAFQQYFLVTQDLNFFSQLGGWDVVKSIAEYWKSRVEWNKSEKCYDINNVMPPDEYHNGVKNSVYTNVVAKYSLDFASDLGELLKVPVPPKWKDISSKLKIPIDHEKNYHPEYDGYNLGESVKQADVILLGFPLGFPMSAQMRKNDLELYEEVTDHDGPAMTWSMFAVGWLEMNDSKKAKEMITRCYQNIHEPFKVWSENPDGSGAVNFLTGMGGFLQANLFGYFGIRITKEGLKFNPNIPENVSEGVVTGLAYLGNKITFSATVANVVLTVTAIDEASHTQLEVVVSSTEKVFPLLLKKPVAFPTSSGRIQMLH
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: complement(join(1240420..1240472,1243520..1243731,1246054..1246151,1265678..1265773,1267541..1267674,1269206..1269342,1272066..1272138,1273518..1273629,1275343..1275474,1276876..1276995,1277283..1277718,1279798..1280008,1287659..1287905))
location: region:1240420-1287905:-1
so has part: feature:1287659-1287905:-1:exon
so has part: feature:1279798-1280008:-1:exon
so has part: feature:1277283-1277718:-1:exon
so has part: feature:1276876-1276995:-1:exon
so has part: feature:1275343-1275474:-1:exon
so has part: feature:1273518-1273629:-1:exon
so has part: feature:1272066-1272138:-1:exon
so has part: feature:1269206-1269342:-1:exon
so has part: feature:1267541-1267674:-1:exon
so has part: feature:1265678-1265773:-1:exon
so has part: feature:1246054-1246151:-1:exon
so has part: feature:1243520-1243731:-1:exon
so has part: feature:1240420-1240472:-1:exon

XP_032815714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1287659-1287905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1279798-1280008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1277283-1277718:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1276876-1276995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1275343-1275474:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1273518-1273629:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1272066-1272138:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1269206-1269342:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1267541-1267674:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1265678-1265773:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1246054-1246151:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1243520-1243731:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1240420-1240472:-1:exon

LOC116945486
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945486
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1351820..1376650
location: region:1351820-1376650:1
so has part: feature:1351820-1376650:1:exon
subclass of: SO_0000010

116945486
type: Gene
SIO_000068: ncbigene

position:1351820:1
position: 1351820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376650:1
position: 1376650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1351820-1376650:1:exon

LOC116945486
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945486
product: alpha-N-acetylneuraminide alpha-2,8-sialyltransferase-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032959827.1
SIO_010081: LOC116945486
subclass of: SO_0000673
so part of: LOC116945486
location: join(1351820..1352422,1361598..1361720,1364450..1364542,1366335..1366421,1367032..1367173,1368696..1368808,1369764..1369856,1372319..1372433,1372950..1376650)
location: region:1351820-1376650:1
so has part: feature:1351820-1352422:1:exon
so has part: feature:1361598-1361720:1:exon
so has part: feature:1364450-1364542:1:exon
so has part: feature:1366335-1366421:1:exon
so has part: feature:1367032-1367173:1:exon
so has part: feature:1368696-1368808:1:exon
so has part: feature:1369764-1369856:1:exon
so has part: feature:1372319-1372433:1:exon
so has part: feature:1372950-1376650:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1351820-1352422:1:exon

position:1352422:1
position: 1352422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1361598-1361720:1:exon

position:1361598:1
position: 1361598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1361720:1
position: 1361720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1364450-1364542:1:exon

position:1364450:1
position: 1364450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1364542:1
position: 1364542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1366335-1366421:1:exon

position:1366335:1
position: 1366335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1366421:1
position: 1366421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1367032-1367173:1:exon

position:1367032:1
position: 1367032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1367173:1
position: 1367173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1368696-1368808:1:exon

position:1368696:1
position: 1368696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1368808:1
position: 1368808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1369764-1369856:1:exon

position:1369764:1
position: 1369764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1369856:1
position: 1369856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1372319-1372433:1:exon

position:1372319:1
position: 1372319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1372433:1
position: 1372433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1372950-1376650:1:exon

position:1372950:1
position: 1372950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945486
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945486
product: alpha-N-acetylneuraminide alpha-2,8-sialyltransferase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032959824.1
SIO_010081: LOC116945486
subclass of: SO_0000673
so part of: LOC116945486
location: join(1351822..1352422,1352871..1353013,1361598..1361720,1364450..1364542,1366335..1366421,1367032..1367173,1368696..1368808,1369764..1369856,1372319..1372433,1372950..1376649)
location: region:1351822-1376649:1
so has part: feature:1351822-1352422:1:exon
so has part: feature:1352871-1353013:1:exon
so has part: feature:1361598-1361720:1:exon
so has part: feature:1364450-1364542:1:exon
so has part: feature:1366335-1366421:1:exon
so has part: feature:1367032-1367173:1:exon
so has part: feature:1368696-1368808:1:exon
so has part: feature:1369764-1369856:1:exon
so has part: feature:1372319-1372433:1:exon
so has part: feature:1372950-1376649:1:exon

position:1351822:1
position: 1351822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376649:1
position: 1376649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1351822-1352422:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1352871-1353013:1:exon

position:1352871:1
position: 1352871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1353013:1
position: 1353013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1361598-1361720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1364450-1364542:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1366335-1366421:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1367032-1367173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1368696-1368808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369764-1369856:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1372319-1372433:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1372950-1376649:1:exon

LOC116945486
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945486
product: alpha-N-acetylneuraminide alpha-2,8-sialyltransferase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032959825.1
SIO_010081: LOC116945486
subclass of: SO_0000673
so part of: LOC116945486
location: join(1352403..1352530,1352871..1353013,1361598..1361720,1364450..1364542,1366335..1366421,1367032..1367173,1368696..1368808,1369764..1369856,1372319..1372433,1372950..1376649)
location: region:1352403-1376649:1
so has part: feature:1352403-1352530:1:exon
so has part: feature:1352871-1353013:1:exon
so has part: feature:1361598-1361720:1:exon
so has part: feature:1364450-1364542:1:exon
so has part: feature:1366335-1366421:1:exon
so has part: feature:1367032-1367173:1:exon
so has part: feature:1368696-1368808:1:exon
so has part: feature:1369764-1369856:1:exon
so has part: feature:1372319-1372433:1:exon
so has part: feature:1372950-1376649:1:exon

position:1352403:1
position: 1352403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1352403-1352530:1:exon

position:1352530:1
position: 1352530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1352871-1353013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1361598-1361720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1364450-1364542:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1366335-1366421:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1367032-1367173:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1368696-1368808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369764-1369856:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1372319-1372433:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1372950-1376649:1:exon

LOC116945486
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945486
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylneuraminide alpha-2,8-sialyltransferase-like isoform X1
translation: MARLHVRLLLSVGLTLLVLVLMKEIIRLELTPSRHMKSHNMNVSTLKLFSNHTSENQNVATENRPPRRHMRPRNSVRRAKKIVRVQSVTSCTRPEFILKPIALPKSSLDNSLLKEAISVNKNRWKANASKKETYKTYMKCFTDGSSNIVVTQNNSPLGSNISYVIGNAQLTVGTELTNIIPMTFPGPEMKMKTCAVVGNSGFLLNSKCGKEIDKSDFIMRCNLPNISKKYSMDVGEKTNLVFVKPSLIVNKYSGLRDSRINFVEDMQNYGSDFLFTAFNHLTHTNLAYKAFYTMDDFATGQSILFLNPNYSRGLRALWNHQGLASKYLSAGLHMTSAALEACEEVHLFGFWPMEIASVSRRGRRGRRSRTSIVTVQQSYFEQSSQESKVKEVFDLKMEFAHLLRLHTNGIIRLQLGACAV
SIO_010081: LOC116945486
subclass of: SO_0000673
so part of: LOC116945486
location: join(1352913..1353013,1361598..1361720,1364450..1364542,1366335..1366421,1367032..1367173,1368696..1368808,1369764..1369856,1372319..1372433,1372950..1373345)
location: region:1352913-1373345:1
so has part: feature:1352913-1353013:1:exon
so has part: feature:1361598-1361720:1:exon
so has part: feature:1364450-1364542:1:exon
so has part: feature:1366335-1366421:1:exon
so has part: feature:1367032-1367173:1:exon
so has part: feature:1368696-1368808:1:exon
so has part: feature:1369764-1369856:1:exon
so has part: feature:1372319-1372433:1:exon
so has part: feature:1372950-1373345:1:exon

XP_032815715.1
type: Protein
SIO_000068: ncbiprotein

position:1352913:1
position: 1352913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373345:1
position: 1373345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1352913-1353013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1361598-1361720:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1364450-1364542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1366335-1366421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1367032-1367173:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1368696-1368808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1369764-1369856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1372319-1372433:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1372950-1373345:1:exon

LOC116945486
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945486
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylneuraminide alpha-2,8-sialyltransferase-like isoform X1
translation: MARLHVRLLLSVGLTLLVLVLMKEIIRLELTPSRHMKSHNMNVSTLKLFSNHTSENQNVATENRPPRRHMRPRNSVRRAKKIVRVQSVTSCTRPEFILKPIALPKSSLDNSLLKEAISVNKNRWKANASKKETYKTYMKCFTDGSSNIVVTQNNSPLGSNISYVIGNAQLTVGTELTNIIPMTFPGPEMKMKTCAVVGNSGFLLNSKCGKEIDKSDFIMRCNLPNISKKYSMDVGEKTNLVFVKPSLIVNKYSGLRDSRINFVEDMQNYGSDFLFTAFNHLTHTNLAYKAFYTMDDFATGQSILFLNPNYSRGLRALWNHQGLASKYLSAGLHMTSAALEACEEVHLFGFWPMEIASVSRRGRRGRRSRTSIVTVQQSYFEQSSQESKVKEVFDLKMEFAHLLRLHTNGIIRLQLGACAV
SIO_010081: LOC116945486
subclass of: SO_0000673
so part of: LOC116945486
location: join(1352913..1353013,1361598..1361720,1364450..1364542,1366335..1366421,1367032..1367173,1368696..1368808,1369764..1369856,1372319..1372433,1372950..1373345)
location: region:1352913-1373345:1
so has part: feature:1352913-1353013:1:exon
so has part: feature:1361598-1361720:1:exon
so has part: feature:1364450-1364542:1:exon
so has part: feature:1366335-1366421:1:exon
so has part: feature:1367032-1367173:1:exon
so has part: feature:1368696-1368808:1:exon
so has part: feature:1369764-1369856:1:exon
so has part: feature:1372319-1372433:1:exon
so has part: feature:1372950-1373345:1:exon

XP_032815716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1352913-1353013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1361598-1361720:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1364450-1364542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1366335-1366421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1367032-1367173:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1368696-1368808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1369764-1369856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1372319-1372433:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1372950-1373345:1:exon

LOC116945486
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945486
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylneuraminide alpha-2,8-sialyltransferase-like isoform X2
translation: MKSHNMNVSTLKLFSNHTSENQNVATENRPPRRHMRPRNSVRRAKKIVRVQSVTSCTRPEFILKPIALPKSSLDNSLLKEAISVNKNRWKANASKKETYKTYMKCFTDGSSNIVVTQNNSPLGSNISYVIGNAQLTVGTELTNIIPMTFPGPEMKMKTCAVVGNSGFLLNSKCGKEIDKSDFIMRCNLPNISKKYSMDVGEKTNLVFVKPSLIVNKYSGLRDSRINFVEDMQNYGSDFLFTAFNHLTHTNLAYKAFYTMDDFATGQSILFLNPNYSRGLRALWNHQGLASKYLSAGLHMTSAALEACEEVHLFGFWPMEIASVSRRGRRGRRSRTSIVTVQQSYFEQSSQESKVKEVFDLKMEFAHLLRLHTNGIIRLQLGACAV
SIO_010081: LOC116945486
subclass of: SO_0000673
so part of: LOC116945486
location: join(1361602..1361720,1364450..1364542,1366335..1366421,1367032..1367173,1368696..1368808,1369764..1369856,1372319..1372433,1372950..1373345)
location: region:1361602-1373345:1
so has part: feature:1361602-1361720:1:exon
so has part: feature:1364450-1364542:1:exon
so has part: feature:1366335-1366421:1:exon
so has part: feature:1367032-1367173:1:exon
so has part: feature:1368696-1368808:1:exon
so has part: feature:1369764-1369856:1:exon
so has part: feature:1372319-1372433:1:exon
so has part: feature:1372950-1373345:1:exon

XP_032815718.1
type: Protein
SIO_000068: ncbiprotein

position:1361602:1
position: 1361602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1361602-1361720:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1364450-1364542:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1366335-1366421:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1367032-1367173:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1368696-1368808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1369764-1369856:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1372319-1372433:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1372950-1373345:1:exon

LOC116945487
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945487
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1378973..1396394)
location: region:1378973-1396394:-1
so has part: feature:1378973-1396394:-1:exon
subclass of: SO_0000010

116945487
type: Gene
SIO_000068: ncbigene

position:1378973:-1
position: 1378973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1396394:-1
position: 1396394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378973-1396394:-1:exon

LOC116945487
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945487
product: receptor expression-enhancing protein 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_032959828.1
SIO_010081: LOC116945487
subclass of: SO_0000673
so part of: LOC116945487
location: complement(join(1378973..1380213,1382515..1382683,1383300..1383438,1385811..1385904,1396200..1396394))
location: region:1378973-1396394:-1
so has part: feature:1396200-1396394:-1:exon
so has part: feature:1385811-1385904:-1:exon
so has part: feature:1383300-1383438:-1:exon
so has part: feature:1382515-1382683:-1:exon
so has part: feature:1378973-1380213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1396200-1396394:-1:exon

position:1396200:-1
position: 1396200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1385811-1385904:-1:exon

position:1385811:-1
position: 1385811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1385904:-1
position: 1385904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1383300-1383438:-1:exon

position:1383300:-1
position: 1383300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383438:-1
position: 1383438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1382515-1382683:-1:exon

position:1382515:-1
position: 1382515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382683:-1
position: 1382683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1378973-1380213:-1:exon

position:1380213:-1
position: 1380213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945487
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945487
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 5-like
translation: MAQLKEMFDNFVKEKNVFTEALDLVEKKTGVSKSILALGLSVFIGIYLIVGYGASLLCNFIGFLYPAYYSIKAIESVNKDDDTQWLIYWVVYGFFCVVEFFSDIFLYWVPFYYFIKCVFLVWCMAPVKYNGAQKIYTLLIRPWFLKHEGKLDDIANNLGKKAKEAADAITKDATKAATNIAAHVLKGEKDS
SIO_010081: LOC116945487
subclass of: SO_0000673
so part of: LOC116945487
location: complement(join(1380155..1380213,1382515..1382683,1383300..1383438,1385811..1385904,1396200..1396314))
location: region:1380155-1396314:-1
so has part: feature:1396200-1396314:-1:exon
so has part: feature:1385811-1385904:-1:exon
so has part: feature:1383300-1383438:-1:exon
so has part: feature:1382515-1382683:-1:exon
so has part: feature:1380155-1380213:-1:exon

XP_032815719.1
type: Protein
SIO_000068: ncbiprotein

position:1380155:-1
position: 1380155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1396314:-1
position: 1396314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1396200-1396314:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1385811-1385904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383300-1383438:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1382515-1382683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1380155-1380213:-1:exon

LOC116945488
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945488
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1430670..1555106
location: region:1430670-1555106:1
so has part: feature:1430670-1555106:1:exon
subclass of: SO_0000010

116945488
type: Gene
SIO_000068: ncbigene

position:1430670:1
position: 1430670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1555106:1
position: 1555106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1430670-1555106:1:exon

LOC116945488
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945488
product: ATP-binding cassette sub-family C member 8-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_032959829.1
SIO_010081: LOC116945488
subclass of: SO_0000673
so part of: LOC116945488
location: join(1430670..1430804,1433196..1433364,1434468..1434609,1451250..1451371,1453742..1453908,1456474..1456716,1457920..1458102,1463867..1464031,1464800..1464955,1467004..1467138,1470457..1470619,1473258..1473298,1474017..1474159,1486124..1486223,1492990..1493100,1497554..1497629,1498344..1498449,1498611..1498649,1501148..1501186,1506373..1506474,1509274..1509358,1511802..1511882,1513875..1514012,1514500..1514625,1514944..1515052,1518506..1518768,1523777..1523946,1525219..1525288,1527838..1527995,1529357..1529449,1530618..1530720,1532911..1533024,1535247..1535367,1537400..1537530,1538572..1538650,1539859..1539967,1541642..1541744,1544042..1544175,1549064..1549126,1554283..1555106)
location: region:1430670-1555106:1
so has part: feature:1430670-1430804:1:exon
so has part: feature:1433196-1433364:1:exon
so has part: feature:1434468-1434609:1:exon
so has part: feature:1451250-1451371:1:exon
so has part: feature:1453742-1453908:1:exon
so has part: feature:1456474-1456716:1:exon
so has part: feature:1457920-1458102:1:exon
so has part: feature:1463867-1464031:1:exon
so has part: feature:1464800-1464955:1:exon
so has part: feature:1467004-1467138:1:exon
so has part: feature:1470457-1470619:1:exon
so has part: feature:1473258-1473298:1:exon
so has part: feature:1474017-1474159:1:exon
so has part: feature:1486124-1486223:1:exon
so has part: feature:1492990-1493100:1:exon
so has part: feature:1497554-1497629:1:exon
so has part: feature:1498344-1498449:1:exon
so has part: feature:1498611-1498649:1:exon
so has part: feature:1501148-1501186:1:exon
so has part: feature:1506373-1506474:1:exon
so has part: feature:1509274-1509358:1:exon
so has part: feature:1511802-1511882:1:exon
so has part: feature:1513875-1514012:1:exon
so has part: feature:1514500-1514625:1:exon
so has part: feature:1514944-1515052:1:exon
so has part: feature:1518506-1518768:1:exon
so has part: feature:1523777-1523946:1:exon
so has part: feature:1525219-1525288:1:exon
so has part: feature:1527838-1527995:1:exon
so has part: feature:1529357-1529449:1:exon
so has part: feature:1530618-1530720:1:exon
so has part: feature:1532911-1533024:1:exon
so has part: feature:1535247-1535367:1:exon
so has part: feature:1537400-1537530:1:exon
so has part: feature:1538572-1538650:1:exon
so has part: feature:1539859-1539967:1:exon
so has part: feature:1541642-1541744:1:exon
so has part: feature:1544042-1544175:1:exon
so has part: feature:1549064-1549126:1:exon
so has part: feature:1554283-1555106:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1430670-1430804:1:exon

position:1430804:1
position: 1430804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1433196-1433364:1:exon

position:1433196:1
position: 1433196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1433364:1
position: 1433364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1434468-1434609:1:exon

position:1434468:1
position: 1434468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434609:1
position: 1434609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1451250-1451371:1:exon

position:1451250:1
position: 1451250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451371:1
position: 1451371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1453742-1453908:1:exon

position:1453742:1
position: 1453742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453908:1
position: 1453908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1456474-1456716:1:exon

position:1456474:1
position: 1456474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456716:1
position: 1456716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1457920-1458102:1:exon

position:1457920:1
position: 1457920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1458102:1
position: 1458102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1463867-1464031:1:exon

position:1463867:1
position: 1463867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1464031:1
position: 1464031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1464800-1464955:1:exon

position:1464800:1
position: 1464800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1464955:1
position: 1464955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1467004-1467138:1:exon

position:1467004:1
position: 1467004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1467138:1
position: 1467138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1470457-1470619:1:exon

position:1470457:1
position: 1470457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470619:1
position: 1470619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1473258-1473298:1:exon

position:1473258:1
position: 1473258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1473298:1
position: 1473298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1474017-1474159:1:exon

position:1474017:1
position: 1474017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1474159:1
position: 1474159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1486124-1486223:1:exon

position:1486124:1
position: 1486124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1486223:1
position: 1486223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1492990-1493100:1:exon

position:1492990:1
position: 1492990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1493100:1
position: 1493100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1497554-1497629:1:exon

position:1497554:1
position: 1497554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1497629:1
position: 1497629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1498344-1498449:1:exon

position:1498344:1
position: 1498344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498449:1
position: 1498449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1498611-1498649:1:exon

position:1498611:1
position: 1498611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498649:1
position: 1498649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1501148-1501186:1:exon

position:1501148:1
position: 1501148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1501186:1
position: 1501186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1506373-1506474:1:exon

position:1506373:1
position: 1506373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1506474:1
position: 1506474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1509274-1509358:1:exon

position:1509274:1
position: 1509274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1509358:1
position: 1509358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1511802-1511882:1:exon

position:1511802:1
position: 1511802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1511882:1
position: 1511882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1513875-1514012:1:exon

position:1513875:1
position: 1513875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514012:1
position: 1514012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1514500-1514625:1:exon

position:1514500:1
position: 1514500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514625:1
position: 1514625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1514944-1515052:1:exon

position:1514944:1
position: 1514944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515052:1
position: 1515052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1518506-1518768:1:exon

position:1518506:1
position: 1518506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1518768:1
position: 1518768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1523777-1523946:1:exon

position:1523777:1
position: 1523777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1523946:1
position: 1523946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1525219-1525288:1:exon

position:1525219:1
position: 1525219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1525288:1
position: 1525288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1527838-1527995:1:exon

position:1527838:1
position: 1527838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1527995:1
position: 1527995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1529357-1529449:1:exon

position:1529357:1
position: 1529357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529449:1
position: 1529449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1530618-1530720:1:exon

position:1530618:1
position: 1530618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1530720:1
position: 1530720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1532911-1533024:1:exon

position:1532911:1
position: 1532911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1533024:1
position: 1533024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1535247-1535367:1:exon

position:1535247:1
position: 1535247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1535367:1
position: 1535367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1537400-1537530:1:exon

position:1537400:1
position: 1537400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1537530:1
position: 1537530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1538572-1538650:1:exon

position:1538572:1
position: 1538572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1538650:1
position: 1538650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1539859-1539967:1:exon

position:1539859:1
position: 1539859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1539967:1
position: 1539967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1541642-1541744:1:exon

position:1541642:1
position: 1541642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1541744:1
position: 1541744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1544042-1544175:1:exon

position:1544042:1
position: 1544042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1544175:1
position: 1544175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1549064-1549126:1:exon

position:1549064:1
position: 1549064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1549126:1
position: 1549126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1554283-1555106:1:exon

position:1554283:1
position: 1554283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945488
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945488
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ATP-binding cassette sub-family C member 8-like
translation: MNTMNRVKLGRSSPAMALAFCGSDSSNVSAYSVDRGVLSNGCFVDALNLVPHVFLLFITFPILFIGWGSQSSKVQIHHNTWLHFPGHNLRWIFTFVLLFVHVCEIAEGVVSDGFMESRHLHLYMPAIMAFIAATTSIVYYHNIETSNFPKLLLALLVYWLLAFTMKTIKLVKFCEHGVGFNQLRFCITGLLVLIYGMLLSVELNVIRMRKYVGFRNPKKVKPPEDLQDLGVRFLQPFVNLLSKATYWWMNAFITSAHRRPIDLKSIGKLPIAMRALTNYIRFRNAYEEQKLSAGEAQPPSIWRSLYRAFGRPILLSSTYRYLSDLLGFAGPLCIWGIVHHLSNKDKKLHPQDKFFGVYFISSREFLANAYVLAVLLFLALILQRTFLQASYYVAIETGINLRGAIQTTIYNKILRLSTSNMSMGEMTIGQICNLVAIDTNQLMWFMFLCPNLWAMPVQIVMGVILLYNQLGVSALIGATVIALLAPAQYYIATKLADVQKCTLEYSNERLMKTSEMLKGIKLLKLYAWENIFCSSVETLREKELKSLKTFAIYTSLSIFMNAGIPIAAVLATFVAHAHIEEAELTPSVAFASLSLFHILVTPLFLLSTVVRFTVKALVSVQKLKEFLRSDEIREEGSRAAWDAPPESNKEDMPLRAINRKAGGKRYWSSLDGQSWRQPSLGEGDDVALKVTSGVFNWTGSGIPTLSNINIQVPHGQMTMIVGQVGCGKSSLLLATLGEMQTMSGAVNWNSRVGSPSTPDGRRSPLDCDGSSEERDSRKRGPVAYAAQKPWLLNATVEENITFGSPFIKQRYIAVIDACSLQPDIDILPQGDQTMIGERGINLSGGQRQRISVARAIYQETNMVFLDDPFSALDVHLSDHLMQEGILKLLRDDKRTVVLVTHKLQYLPHADWIIAMKDGTVLREGTLKDIQNNDPELYEHWKTLMNRQDQEFEKETISESKTALERKNLRRAMYSREAQLKTQQDEEEEEEEEVESDDEDDVSSVFRQRAKLPWGAFLRYLTSGGAPLLLLLILSQLLKHSAMVAIDFWLSEWTSDAYNCTGAAQQSNCSQGNGTQAALQGCRILCIYPMVFGLLCCSGIALCFITSLTVEWTGLKTARNVHNNMLKRIVLAPMRYFDTTPLGHILNRFSADTNIMDQQIPTTLESLMRSALLCLSALGIIAYVTPIFLIALVPLAIAYYFIQKYFRVASRDLQELDDSTQLPLFSHFSETVEGITTIRAFRHEVRFRQRLLELTDANNISYLFLSAANRWLEVRLDYIGACIVLIASVASITDSWNNTLSSARVGLCLTYALMVSNYLNWVVRNLADIEVQMGAIKRVNNLLQIETESYDGLLSQAQVPDNWPQSGEIKIEELSVRYDSTLKPVLKHVNATIQPSQKVGICGRTGSGKSSLSLAFFRMVDTFEGRIIIDNIDIAKIPLHTLRSRLSIILQDPILFSGSIRFNLDPEAACGDGVLWEALDIAQLKHVVRXLPGGLDAMVTENGENFSVGQRQLFCLARAFVRKTSIFIMDEATASIDMATESILQKVVMTAFANRTVVIIAHRVHTILTADLVMVLKRGSVLEYDTPSTLLAHDSMFASFVRADK
SIO_010081: LOC116945488
subclass of: SO_0000673
so part of: LOC116945488
location: join(1430778..1430804,1433196..1433364,1434468..1434609,1451250..1451371,1453742..1453908,1456474..1456716,1457920..1458102,1463867..1464031,1464800..1464955,1467004..1467138,1470457..1470619,1473258..1473298,1474017..1474159,1486124..1486223,1492990..1493100,1497554..1497629,1498344..1498449,1498611..1498649,1501148..1501186,1506373..1506474,1509274..1509358,1511802..1511882,1513875..1514012,1514500..1514625,1514944..1515052,1518506..1518768,1523777..1523946,1525219..1525288,1527838..1527995,1529357..1529449,1530618..1530720,1532911..1533024,1535247..1535367,1537400..1537530,1538572..1538650,1539859..1539967,1541642..1541744,1544042..1544175,1549064..1549126,1554283..1554417)
location: region:1430778-1554417:1
so has part: feature:1430778-1430804:1:exon
so has part: feature:1433196-1433364:1:exon
so has part: feature:1434468-1434609:1:exon
so has part: feature:1451250-1451371:1:exon
so has part: feature:1453742-1453908:1:exon
so has part: feature:1456474-1456716:1:exon
so has part: feature:1457920-1458102:1:exon
so has part: feature:1463867-1464031:1:exon
so has part: feature:1464800-1464955:1:exon
so has part: feature:1467004-1467138:1:exon
so has part: feature:1470457-1470619:1:exon
so has part: feature:1473258-1473298:1:exon
so has part: feature:1474017-1474159:1:exon
so has part: feature:1486124-1486223:1:exon
so has part: feature:1492990-1493100:1:exon
so has part: feature:1497554-1497629:1:exon
so has part: feature:1498344-1498449:1:exon
so has part: feature:1498611-1498649:1:exon
so has part: feature:1501148-1501186:1:exon
so has part: feature:1506373-1506474:1:exon
so has part: feature:1509274-1509358:1:exon
so has part: feature:1511802-1511882:1:exon
so has part: feature:1513875-1514012:1:exon
so has part: feature:1514500-1514625:1:exon
so has part: feature:1514944-1515052:1:exon
so has part: feature:1518506-1518768:1:exon
so has part: feature:1523777-1523946:1:exon
so has part: feature:1525219-1525288:1:exon
so has part: feature:1527838-1527995:1:exon
so has part: feature:1529357-1529449:1:exon
so has part: feature:1530618-1530720:1:exon
so has part: feature:1532911-1533024:1:exon
so has part: feature:1535247-1535367:1:exon
so has part: feature:1537400-1537530:1:exon
so has part: feature:1538572-1538650:1:exon
so has part: feature:1539859-1539967:1:exon
so has part: feature:1541642-1541744:1:exon
so has part: feature:1544042-1544175:1:exon
so has part: feature:1549064-1549126:1:exon
so has part: feature:1554283-1554417:1:exon

XP_032815720.1
type: Protein
SIO_000068: ncbiprotein

position:1430778:1
position: 1430778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1554417:1
position: 1554417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1430778-1430804:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1433196-1433364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1434468-1434609:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1451250-1451371:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1453742-1453908:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1456474-1456716:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1457920-1458102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1463867-1464031:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1464800-1464955:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1467004-1467138:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1470457-1470619:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1473258-1473298:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1474017-1474159:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1486124-1486223:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1492990-1493100:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1497554-1497629:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1498344-1498449:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1498611-1498649:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1501148-1501186:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1506373-1506474:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1509274-1509358:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1511802-1511882:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1513875-1514012:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1514500-1514625:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1514944-1515052:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1518506-1518768:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1523777-1523946:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1525219-1525288:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1527838-1527995:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1529357-1529449:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1530618-1530720:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1532911-1533024:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1535247-1535367:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1537400-1537530:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1538572-1538650:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1539859-1539967:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1541642-1541744:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1544042-1544175:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1549064-1549126:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1554283-1554417:1:exon

LOC116945489
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945489
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1583752..1608520)
location: region:1583752-1608520:-1
so has part: feature:1583752-1608520:-1:exon
subclass of: SO_0000010

116945489
type: Gene
SIO_000068: ncbigene

position:1583752:-1
position: 1583752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1608520:-1
position: 1608520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1583752-1608520:-1:exon

LOC116945489
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945489
product: tumor susceptibility gene 101 protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_032959830.1
SIO_010081: LOC116945489
subclass of: SO_0000673
so part of: LOC116945489
location: complement(join(1583752..1585113,1586593..1586832,1589402..1589604,1590850..1590965,1592496..1592544,1594252..1594408,1595362..1595525,1596759..1596824,1598568..1598652,1608288..1608520))
location: region:1583752-1608520:-1
so has part: feature:1608288-1608520:-1:exon
so has part: feature:1598568-1598652:-1:exon
so has part: feature:1596759-1596824:-1:exon
so has part: feature:1595362-1595525:-1:exon
so has part: feature:1594252-1594408:-1:exon
so has part: feature:1592496-1592544:-1:exon
so has part: feature:1590850-1590965:-1:exon
so has part: feature:1589402-1589604:-1:exon
so has part: feature:1586593-1586832:-1:exon
so has part: feature:1583752-1585113:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1608288-1608520:-1:exon

position:1608288:-1
position: 1608288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1598568-1598652:-1:exon

position:1598568:-1
position: 1598568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1598652:-1
position: 1598652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1596759-1596824:-1:exon

position:1596759:-1
position: 1596759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1596824:-1
position: 1596824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1595362-1595525:-1:exon

position:1595362:-1
position: 1595362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1595525:-1
position: 1595525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1594252-1594408:-1:exon

position:1594252:-1
position: 1594252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594408:-1
position: 1594408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1592496-1592544:-1:exon

position:1592496:-1
position: 1592496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1592544:-1
position: 1592544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1590850-1590965:-1:exon

position:1590850:-1
position: 1590850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590965:-1
position: 1590965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1589402-1589604:-1:exon

position:1589402:-1
position: 1589402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1589604:-1
position: 1589604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1586593-1586832:-1:exon

position:1586593:-1
position: 1586593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1586832:-1
position: 1586832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1583752-1585113:-1:exon

position:1585113:-1
position: 1585113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945489
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945489
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor susceptibility gene 101 protein-like
translation: MALPTEASVKKLLGKYKYKDMTTKDVMNVIAVYKDLKPVVDMHVFNDGTARELVSLNGTIPVNYRGSIYNIPVQLWLFDTHPYNPPICFVKPTSTMLIKQGKHVDANGRVYLPYLHEWKANASDLVGLIQVMLVVFGEEPPVFSRTSAGQAVAPMGPFNHGYPSYPAAGPPMGSYVPGGGTYPYQPTANTNYPPYPFSGGSAYPAPPPAQPQISQPHYGSQPVPGTSAMSRDGVISEEHIRASLVSAITDKLRWRLNEEVSRAQAELEALQRTEEELRNGQRSLQDMAGRITREIGDVDQNIDLLKKKDEEITSALEKMESQSESSNIDEAVVTTAPLYKQILNLYAEENAIEDTIFYLGEALRQGVIDLDVFLKHVRLLARKQFQLRALMQKARKTACLTDHY
SIO_010081: LOC116945489
subclass of: SO_0000673
so part of: LOC116945489
location: complement(join(1585024..1585113,1586593..1586832,1589402..1589604,1590850..1590965,1592496..1592544,1594252..1594408,1595362..1595525,1596759..1596824,1598568..1598652,1608288..1608332))
location: region:1585024-1608332:-1
so has part: feature:1608288-1608332:-1:exon
so has part: feature:1598568-1598652:-1:exon
so has part: feature:1596759-1596824:-1:exon
so has part: feature:1595362-1595525:-1:exon
so has part: feature:1594252-1594408:-1:exon
so has part: feature:1592496-1592544:-1:exon
so has part: feature:1590850-1590965:-1:exon
so has part: feature:1589402-1589604:-1:exon
so has part: feature:1586593-1586832:-1:exon
so has part: feature:1585024-1585113:-1:exon

XP_032815721.1
type: Protein
SIO_000068: ncbiprotein

position:1585024:-1
position: 1585024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1608332:-1
position: 1608332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1608288-1608332:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1598568-1598652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1596759-1596824:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1595362-1595525:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594252-1594408:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1592496-1592544:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1590850-1590965:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1589402-1589604:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1586593-1586832:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1585024-1585113:-1:exon

LOC116945490
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945490
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1610545..1614041)
location: region:1610545-1614041:-1
so has part: feature:1610545-1614041:-1:exon
subclass of: SO_0000011

116945490
type: Gene
SIO_000068: ncbigene

position:1610545:-1
position: 1610545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1614041:-1
position: 1614041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1610545-1614041:-1:exon

LOC116945490
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116945490
product: uncharacterized LOC116945490
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XR_004403334.1
SIO_010081: LOC116945490
subclass of: SO_0000673
so part of: LOC116945490
location: complement(join(1610545..1611124,1612534..1612655,1613815..1614041))
location: region:1610545-1614041:-1
so has part: feature:1613815-1614041:-1:exon
so has part: feature:1612534-1612655:-1:exon
so has part: feature:1610545-1611124:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1613815-1614041:-1:exon

position:1613815:-1
position: 1613815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1612534-1612655:-1:exon

position:1612534:-1
position: 1612534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1612655:-1
position: 1612655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1610545-1611124:-1:exon

position:1611124:-1
position: 1611124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945432
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945432
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1618339..1686553)
location: region:1618339-1686553:-1
so has part: feature:1618339-1686553:-1:exon
subclass of: SO_0000010

116945432
type: Gene
SIO_000068: ncbigene

position:1618339:-1
position: 1618339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1686553:-1
position: 1686553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1618339-1686553:-1:exon

LOC116945432
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945432
product: ceruloplasmin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032959744.1
SIO_010081: LOC116945432
subclass of: SO_0000673
so part of: LOC116945432
location: complement(join(1618339..1619341,1620418..1620586,1635635..1635774,1638456..1638678,1652295..1652491,1655710..1655926,1657098..1657305,1660640..1660853,1662402..1662654,1664341..1664517,1667365..1667677,1673674..1673821,1675833..1676080,1676751..1676957,1677378..1677380,1678718..1679030,1681833..1682012,1683451..1683660,1684607..1684851,1686353..1686553))
location: region:1618339-1686553:-1
so has part: feature:1686353-1686553:-1:exon
so has part: feature:1684607-1684851:-1:exon
so has part: feature:1683451-1683660:-1:exon
so has part: feature:1681833-1682012:-1:exon
so has part: feature:1678718-1679030:-1:exon
so has part: feature:1677378-1677380:-1:exon
so has part: feature:1676751-1676957:-1:exon
so has part: feature:1675833-1676080:-1:exon
so has part: feature:1673674-1673821:-1:exon
so has part: feature:1667365-1667677:-1:exon
so has part: feature:1664341-1664517:-1:exon
so has part: feature:1662402-1662654:-1:exon
so has part: feature:1660640-1660853:-1:exon
so has part: feature:1657098-1657305:-1:exon
so has part: feature:1655710-1655926:-1:exon
so has part: feature:1652295-1652491:-1:exon
so has part: feature:1638456-1638678:-1:exon
so has part: feature:1635635-1635774:-1:exon
so has part: feature:1620418-1620586:-1:exon
so has part: feature:1618339-1619341:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1686353-1686553:-1:exon

position:1686353:-1
position: 1686353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1684607-1684851:-1:exon

position:1684607:-1
position: 1684607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1684851:-1
position: 1684851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1683451-1683660:-1:exon

position:1683451:-1
position: 1683451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1683660:-1
position: 1683660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1681833-1682012:-1:exon

position:1681833:-1
position: 1681833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1682012:-1
position: 1682012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1678718-1679030:-1:exon

position:1678718:-1
position: 1678718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1679030:-1
position: 1679030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1677378-1677380:-1:exon

position:1677378:-1
position: 1677378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1677380:-1
position: 1677380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1676751-1676957:-1:exon

position:1676751:-1
position: 1676751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1676957:-1
position: 1676957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1675833-1676080:-1:exon

position:1675833:-1
position: 1675833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1676080:-1
position: 1676080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1673674-1673821:-1:exon

position:1673674:-1
position: 1673674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1673821:-1
position: 1673821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1667365-1667677:-1:exon

position:1667365:-1
position: 1667365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1667677:-1
position: 1667677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1664341-1664517:-1:exon

position:1664341:-1
position: 1664341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664517:-1
position: 1664517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1662402-1662654:-1:exon

position:1662402:-1
position: 1662402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1662654:-1
position: 1662654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1660640-1660853:-1:exon

position:1660640:-1
position: 1660640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1660853:-1
position: 1660853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1657098-1657305:-1:exon

position:1657098:-1
position: 1657098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1657305:-1
position: 1657305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1655710-1655926:-1:exon

position:1655710:-1
position: 1655710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1655926:-1
position: 1655926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1652295-1652491:-1:exon

position:1652295:-1
position: 1652295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1652491:-1
position: 1652491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1638456-1638678:-1:exon

position:1638456:-1
position: 1638456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1638678:-1
position: 1638678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1635635-1635774:-1:exon

position:1635635:-1
position: 1635635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1635774:-1
position: 1635774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1620418-1620586:-1:exon

position:1620418:-1
position: 1620418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1620586:-1
position: 1620586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1618339-1619341:-1:exon

position:1619341:-1
position: 1619341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945432
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945432
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceruloplasmin-like
translation: MLLCSVCLETMHLAGMWWCVFYLNVAFTCAMMREYYIAAKEIYWDYAPSGRNLIKNISISDDEQAILTLQRGPERIGRIYKKAVYIQYTDGSFTQEIPKDPWLGYLGPTMKAEVHDVIAVYFKNLASRPYSMHPHGVFYSKASEGANYPDGQEFGSKGEFVLPGQTHTYHWVVRDETSPGSDDPNCFTWIYHSHVNEPKDVNSGLIGALLTCRKGILLLGTAERQDVGEDFILMFTIVDENNSWYLEDNIRETIADPRSLDRSDLHFQRSNFKTSINGYMYGNLPGLNMCSEVNVSWHIFGLGSEVDIHTAHFRGQALTSKHHRVDTVGLFPATFVTALMVPTNPGRWLLACDVNEHFAGERVLLTVAIHCQMLSQSQYLASLGEPRAAWTGGMQAAFNVLECQGSNQSVWHSDGEERTFFIAAEEVDWDYGPSGINNATGEDLTQPGSQLSGLTSEPPRPSPRSCMYARHCHSSCGNFVRDCSSDSEKYFTKGPSRIGGVYRKILYTEYTDASFTARRQRTPKQRHMGMLGPVLRAEVGDELVVTFKNMGSRGYNIHPHGVFASSEHVAKGNYGEMDPLKAWAICWRWVSACCLLPSPLVRGFPTPTCTLFYFTELHKVAAVPAGGMHTYRWAVPQGAGPTQADEPCITYLYTSSVDHVRDGHSGLVGPLLICRNGSLDQHGDQSGTDEEVFLLFDVVNEGLSWYLPWNKQRNNVTAPDDDSSFREANLRHSKQGDVTFGNEGALTHCALTRASLEAINGFMFGNLPGLEVCVGKRVSWHVLAVGSQADLHTAYFTGQTLLFDLRRVDTIALFPHLSYTALMLTDTTGGFELMCRTNEHFNEGMRAKFRVSECGMPPGPVFVPQRERTYYLAIREEVWDYAPNRSWEMKMHNTTNPALSPANKFLGSGETRIGSRYKKVRFVEFTDDSFKNPKVRTTEEEHLAALGKVSLWVNKHNTWKMYKREDTHKVDCQTYQGEWRGVILRHGNVPCLVVELRAGPLLKGQVGELLVVVLWNRASRPYSIHSHGVISDVPGGLPLKPGARKTYRWQIPDRSGPSQADTNCITWIYYSAVDFVRVSAKHQDVTSRDHTYSICSPLRIVRLESHFDPNSGLVGPLVVCRSGLLDDSGHRNDVAHEFALLFMVYDENLSWYLRDNIDNFTGNPGAVDVADKDFRESNLMHSINGMTFGNLNGLNMGLKERVDWYLMGLGGELDMHTIHFHGQTFRYKVAGKDTVSDVYDVFAGTFVTVEMTTDNPGTWLLHCHVHDHIEAGMVAFFQIKTKPLVTANPTEKTAIGQHSSASSHTGLYSLALSQLCVKLLVASHLLHIYVHESS
SIO_010081: LOC116945432
subclass of: SO_0000673
so part of: LOC116945432
location: complement(join(1619190..1619341,1620418..1620586,1635635..1635774,1638456..1638678,1652295..1652491,1655710..1655926,1657098..1657305,1660640..1660853,1662402..1662654,1664341..1664517,1667365..1667677,1673674..1673821,1675833..1676080,1676751..1676957,1677378..1677380,1678718..1679030,1681833..1682012,1683451..1683660,1684607..1684851,1686353..1686540))
location: region:1619190-1686540:-1
so has part: feature:1686353-1686540:-1:exon
so has part: feature:1684607-1684851:-1:exon
so has part: feature:1683451-1683660:-1:exon
so has part: feature:1681833-1682012:-1:exon
so has part: feature:1678718-1679030:-1:exon
so has part: feature:1677378-1677380:-1:exon
so has part: feature:1676751-1676957:-1:exon
so has part: feature:1675833-1676080:-1:exon
so has part: feature:1673674-1673821:-1:exon
so has part: feature:1667365-1667677:-1:exon
so has part: feature:1664341-1664517:-1:exon
so has part: feature:1662402-1662654:-1:exon
so has part: feature:1660640-1660853:-1:exon
so has part: feature:1657098-1657305:-1:exon
so has part: feature:1655710-1655926:-1:exon
so has part: feature:1652295-1652491:-1:exon
so has part: feature:1638456-1638678:-1:exon
so has part: feature:1635635-1635774:-1:exon
so has part: feature:1620418-1620586:-1:exon
so has part: feature:1619190-1619341:-1:exon

XP_032815635.1
type: Protein
SIO_000068: ncbiprotein

position:1619190:-1
position: 1619190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1686540:-1
position: 1686540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1686353-1686540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1684607-1684851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683451-1683660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1681833-1682012:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1678718-1679030:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1677378-1677380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1676751-1676957:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1675833-1676080:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1673674-1673821:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1667365-1667677:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1664341-1664517:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1662402-1662654:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1660640-1660853:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1657098-1657305:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1655710-1655926:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1652295-1652491:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1638456-1638678:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1635635-1635774:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1620418-1620586:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1619190-1619341:-1:exon

LOC116945491
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945491
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1697541..1713906)
location: region:1697541-1713906:-1
so has part: feature:1697541-1713906:-1:exon
subclass of: SO_0000010

116945491
type: Gene
SIO_000068: ncbigene

position:1697541:-1
position: 1697541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1713906:-1
position: 1713906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1697541-1713906:-1:exon

LOC116945491
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945491
product: SH3 domain-binding glutamic acid-rich-like protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_032959831.1
SIO_010081: LOC116945491
subclass of: SO_0000673
so part of: LOC116945491
location: complement(join(1697541..1698742,1700738..1700905,1713643..1713906))
location: region:1697541-1713906:-1
so has part: feature:1713643-1713906:-1:exon
so has part: feature:1700738-1700905:-1:exon
so has part: feature:1697541-1698742:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1713643-1713906:-1:exon

position:1713643:-1
position: 1713643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1700738-1700905:-1:exon

position:1700738:-1
position: 1700738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1700905:-1
position: 1700905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1697541-1698742:-1:exon

position:1698742:-1
position: 1698742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945491
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945491
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain-binding glutamic acid-rich-like protein 3
translation: MVVKVYYTSVAASREVKSNQSEVQRVLEAKGLKFEMVDIAANDEHRQNMRKLSGNPTAMPPQLFNENAYCGDYEKFAEAVELDSIETFLKLK
SIO_010081: LOC116945491
subclass of: SO_0000673
so part of: LOC116945491
location: complement(join(1698677..1698742,1700738..1700905,1713643..1713687))
location: region:1698677-1713687:-1
so has part: feature:1713643-1713687:-1:exon
so has part: feature:1700738-1700905:-1:exon
so has part: feature:1698677-1698742:-1:exon

XP_032815722.1
type: Protein
SIO_000068: ncbiprotein

position:1698677:-1
position: 1698677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1713687:-1
position: 1713687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1713643-1713687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1700738-1700905:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1698677-1698742:-1:exon

LOC116945492
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945492
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1720023..1739326
location: region:1720023-1739326:1
so has part: feature:1720023-1739326:1:exon
subclass of: SO_0000010

116945492
type: Gene
SIO_000068: ncbigene

position:1720023:1
position: 1720023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1739326:1
position: 1739326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1720023-1739326:1:exon

LOC116945492
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945492
product: DNA fragmentation factor subunit beta-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_032959832.1
SIO_010081: LOC116945492
subclass of: SO_0000673
so part of: LOC116945492
location: join(1720023..1720385,1722791..1722920,1724821..1725000,1726418..1726497,1731069..1731239,1732884..1732984,1737873..1739326)
location: region:1720023-1739326:1
so has part: feature:1720023-1720385:1:exon
so has part: feature:1722791-1722920:1:exon
so has part: feature:1724821-1725000:1:exon
so has part: feature:1726418-1726497:1:exon
so has part: feature:1731069-1731239:1:exon
so has part: feature:1732884-1732984:1:exon
so has part: feature:1737873-1739326:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1720023-1720385:1:exon

position:1720385:1
position: 1720385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1722791-1722920:1:exon

position:1722791:1
position: 1722791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1722920:1
position: 1722920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1724821-1725000:1:exon

position:1724821:1
position: 1724821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1725000:1
position: 1725000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1726418-1726497:1:exon

position:1726418:1
position: 1726418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1726497:1
position: 1726497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1731069-1731239:1:exon

position:1731069:1
position: 1731069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1731239:1
position: 1731239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1732884-1732984:1:exon

position:1732884:1
position: 1732884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1732984:1
position: 1732984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1737873-1739326:1:exon

position:1737873:1
position: 1737873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945492
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945492
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA fragmentation factor subunit beta-like
translation: MEGESPRMFRVRIPSDAQRFGVVAVSLCQLVTKAAIKLKLAERSVGPLRVCLEEDGTEVVDEEYFSVLDRNTCLVILKRNERWTGVGVHAVSHAMVHFERCTRDVLEIFRKDPNGKYRNILKNFLNSIEDCSERESRQDDPKWFEGVDNRFKHKREEMRYRCKTRMRGYLSDAVAYKKKVPLEHQKRYEELLQLLRNELKTECFNEDYFDRSAAVVVRLCDNNGQFSCQGAYNKQDCQYQHKINPYANWESRIQFSVWNLDHRIEKSREVLPSLKTALEKSNGRQINWRYFYGLLFTRENLKLVDIVCHDKTCHKLKCKKLKFYMQ
SIO_010081: LOC116945492
subclass of: SO_0000673
so part of: LOC116945492
location: join(1720260..1720385,1722791..1722920,1724821..1725000,1726418..1726497,1731069..1731239,1732884..1732984,1737873..1738065)
location: region:1720260-1738065:1
so has part: feature:1720260-1720385:1:exon
so has part: feature:1722791-1722920:1:exon
so has part: feature:1724821-1725000:1:exon
so has part: feature:1726418-1726497:1:exon
so has part: feature:1731069-1731239:1:exon
so has part: feature:1732884-1732984:1:exon
so has part: feature:1737873-1738065:1:exon

XP_032815723.1
type: Protein
SIO_000068: ncbiprotein

position:1720260:1
position: 1720260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1738065:1
position: 1738065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1720260-1720385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1722791-1722920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1724821-1725000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1726418-1726497:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1731069-1731239:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1732884-1732984:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1737873-1738065:1:exon

LOC116945493
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945493
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1748398..1790143)
location: region:1748398-1790143:-1
so has part: feature:1748398-1790143:-1:exon
subclass of: SO_0000010

116945493
type: Gene
SIO_000068: ncbigene

position:1748398:-1
position: 1748398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1790143:-1
position: 1790143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1748398-1790143:-1:exon

LOC116945493
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945493
product: beta-parvin-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_032959835.1
SIO_010081: LOC116945493
subclass of: SO_0000673
so part of: LOC116945493
location: complement(join(1748398..1749978,1755667..1755739,1757907..1758008,1759388..1759456,1760906..1760967,1761086..1761105,1761436..1761494,1762094..1762209,1764606..1764746,1766011..1766113,1766798..1766868,1769676..1769765,1789752..1790143))
location: region:1748398-1790143:-1
so has part: feature:1789752-1790143:-1:exon
so has part: feature:1769676-1769765:-1:exon
so has part: feature:1766798-1766868:-1:exon
so has part: feature:1766011-1766113:-1:exon
so has part: feature:1764606-1764746:-1:exon
so has part: feature:1762094-1762209:-1:exon
so has part: feature:1761436-1761494:-1:exon
so has part: feature:1761086-1761105:-1:exon
so has part: feature:1760906-1760967:-1:exon
so has part: feature:1759388-1759456:-1:exon
so has part: feature:1757907-1758008:-1:exon
so has part: feature:1755667-1755739:-1:exon
so has part: feature:1748398-1749978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1789752-1790143:-1:exon

position:1789752:-1
position: 1789752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1769676-1769765:-1:exon

position:1769676:-1
position: 1769676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1769765:-1
position: 1769765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1766798-1766868:-1:exon

position:1766798:-1
position: 1766798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1766868:-1
position: 1766868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1766011-1766113:-1:exon

position:1766011:-1
position: 1766011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1766113:-1
position: 1766113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1764606-1764746:-1:exon

position:1764606:-1
position: 1764606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1764746:-1
position: 1764746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1762094-1762209:-1:exon

position:1762094:-1
position: 1762094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1762209:-1
position: 1762209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1761436-1761494:-1:exon

position:1761436:-1
position: 1761436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1761494:-1
position: 1761494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1761086-1761105:-1:exon

position:1761086:-1
position: 1761086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1761105:-1
position: 1761105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1760906-1760967:-1:exon

position:1760906:-1
position: 1760906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1760967:-1
position: 1760967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1759388-1759456:-1:exon

position:1759388:-1
position: 1759388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1759456:-1
position: 1759456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1757907-1758008:-1:exon

position:1757907:-1
position: 1757907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1758008:-1
position: 1758008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1755667-1755739:-1:exon

position:1755667:-1
position: 1755667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1755739:-1
position: 1755739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1748398-1749978:-1:exon

position:1749978:-1
position: 1749978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945493
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945493
product: beta-parvin-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032959834.1
SIO_010081: LOC116945493
subclass of: SO_0000673
so part of: LOC116945493
location: complement(join(1748398..1749978,1755667..1755739,1757907..1758008,1759388..1759456,1760906..1760967,1761086..1761105,1761436..1761494,1762094..1762209,1764606..1764746,1766011..1766113,1766798..1766868,1769676..1769765,1770033..1770216))
location: region:1748398-1770216:-1
so has part: feature:1770033-1770216:-1:exon
so has part: feature:1769676-1769765:-1:exon
so has part: feature:1766798-1766868:-1:exon
so has part: feature:1766011-1766113:-1:exon
so has part: feature:1764606-1764746:-1:exon
so has part: feature:1762094-1762209:-1:exon
so has part: feature:1761436-1761494:-1:exon
so has part: feature:1761086-1761105:-1:exon
so has part: feature:1760906-1760967:-1:exon
so has part: feature:1759388-1759456:-1:exon
so has part: feature:1757907-1758008:-1:exon
so has part: feature:1755667-1755739:-1:exon
so has part: feature:1748398-1749978:-1:exon

position:1770216:-1
position: 1770216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1770033-1770216:-1:exon

position:1770033:-1
position: 1770033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1769676-1769765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1766798-1766868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1766011-1766113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1764606-1764746:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1762094-1762209:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1761436-1761494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1761086-1761105:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1760906-1760967:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1759388-1759456:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1757907-1758008:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1755667-1755739:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1748398-1749978:-1:exon

LOC116945493
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945493
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-parvin-like isoform X2
translation: MATSPVKSPTGSLKGKKDDSFLGKFGTLTRKKKSKEVSELQEEGKNAINSPLSPTPLDLYPEDTMLEENEERSIIDPNYKDEPKLQELIRVLIDWINDVLVDERIIVKNLEEDLYDGQVLQKLLEALGQQKLNVAEVTQSEIGQKQKLQTVLLAVNHILKPQQWSIKWSVDLIHSKNLVAILHLLVALAIHYRAPIRLPEHVTIQLLVVQKRGGSLQTRQVQEKITTTTESMTGRFERDAFDTLFDHAPDKLNVVKKSLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLYGFYLTPDSFDQKVHNVTFAFELMQDGGLAKPKARPEDVVNLDLKSTLRVLYNLFTKYKHLD
SIO_010081: LOC116945493
subclass of: SO_0000673
so part of: LOC116945493
location: complement(join(1749902..1749978,1755667..1755739,1757907..1758008,1759388..1759456,1760906..1760967,1761086..1761105,1761436..1761494,1762094..1762209,1764606..1764746,1766011..1766113,1766798..1766868,1769676..1769765,1789752..1789860))
location: region:1749902-1789860:-1
so has part: feature:1789752-1789860:-1:exon
so has part: feature:1769676-1769765:-1:exon
so has part: feature:1766798-1766868:-1:exon
so has part: feature:1766011-1766113:-1:exon
so has part: feature:1764606-1764746:-1:exon
so has part: feature:1762094-1762209:-1:exon
so has part: feature:1761436-1761494:-1:exon
so has part: feature:1761086-1761105:-1:exon
so has part: feature:1760906-1760967:-1:exon
so has part: feature:1759388-1759456:-1:exon
so has part: feature:1757907-1758008:-1:exon
so has part: feature:1755667-1755739:-1:exon
so has part: feature:1749902-1749978:-1:exon

XP_032815726.1
type: Protein
SIO_000068: ncbiprotein

position:1749902:-1
position: 1749902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1789860:-1
position: 1789860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1789752-1789860:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1769676-1769765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1766798-1766868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1766011-1766113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1764606-1764746:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1762094-1762209:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1761436-1761494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1761086-1761105:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1760906-1760967:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1759388-1759456:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1757907-1758008:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1755667-1755739:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1749902-1749978:-1:exon

LOC116945493
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945493
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-parvin-like isoform X1
translation: MCPHYRGKISCLDSAGLQACAVAADDDARYDDNDDIIFALQPADQSRTALGYDQNNVSELQEEGKNAINSPLSPTPLDLYPEDTMLEENEERSIIDPNYKDEPKLQELIRVLIDWINDVLVDERIIVKNLEEDLYDGQVLQKLLEALGQQKLNVAEVTQSEIGQKQKLQTVLLAVNHILKPQQWSIKWSVDLIHSKNLVAILHLLVALAIHYRAPIRLPEHVTIQLLVVQKRGGSLQTRQVQEKITTTTESMTGRFERDAFDTLFDHAPDKLNVVKKSLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLYGFYLTPDSFDQKVHNVTFAFELMQDGGLAKPKARPEDVVNLDLKSTLRVLYNLFTKYKHLD
SIO_010081: LOC116945493
subclass of: SO_0000673
so part of: LOC116945493
location: complement(join(1749902..1749978,1755667..1755739,1757907..1758008,1759388..1759456,1760906..1760967,1761086..1761105,1761436..1761494,1762094..1762209,1764606..1764746,1766011..1766113,1766798..1766868,1769676..1769765,1770033..1770201))
location: region:1749902-1770201:-1
so has part: feature:1770033-1770201:-1:exon
so has part: feature:1769676-1769765:-1:exon
so has part: feature:1766798-1766868:-1:exon
so has part: feature:1766011-1766113:-1:exon
so has part: feature:1764606-1764746:-1:exon
so has part: feature:1762094-1762209:-1:exon
so has part: feature:1761436-1761494:-1:exon
so has part: feature:1761086-1761105:-1:exon
so has part: feature:1760906-1760967:-1:exon
so has part: feature:1759388-1759456:-1:exon
so has part: feature:1757907-1758008:-1:exon
so has part: feature:1755667-1755739:-1:exon
so has part: feature:1749902-1749978:-1:exon

XP_032815725.1
type: Protein
SIO_000068: ncbiprotein

position:1770201:-1
position: 1770201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1770033-1770201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1769676-1769765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1766798-1766868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1766011-1766113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1764606-1764746:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1762094-1762209:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1761436-1761494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1761086-1761105:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1760906-1760967:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1759388-1759456:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1757907-1758008:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1755667-1755739:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1749902-1749978:-1:exon

LOC116945494
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945494
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1802476..1808809)
location: region:1802476-1808809:-1
so has part: feature:1802476-1808809:-1:exon
subclass of: SO_0000010

116945494
type: Gene
SIO_000068: ncbigene

position:1802476:-1
position: 1802476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808809:-1
position: 1808809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1802476-1808809:-1:exon

LOC116945494
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945494
product: uncharacterized LOC116945494
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032959836.1
SIO_010081: LOC116945494
subclass of: SO_0000673
so part of: LOC116945494
location: complement(join(1802476..1802695,1802920..1803005,1804888..1805216,1805625..1805977,1808687..1808809))
location: region:1802476-1808809:-1
so has part: feature:1808687-1808809:-1:exon
so has part: feature:1805625-1805977:-1:exon
so has part: feature:1804888-1805216:-1:exon
so has part: feature:1802920-1803005:-1:exon
so has part: feature:1802476-1802695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1808687-1808809:-1:exon

position:1808687:-1
position: 1808687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1805625-1805977:-1:exon

position:1805625:-1
position: 1805625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1805977:-1
position: 1805977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1804888-1805216:-1:exon

position:1804888:-1
position: 1804888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1805216:-1
position: 1805216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1802920-1803005:-1:exon

position:1802920:-1
position: 1802920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1803005:-1
position: 1803005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1802476-1802695:-1:exon

position:1802695:-1
position: 1802695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945494
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945494
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116945494
translation: METSPRQVDIDHIPTATRYNLSPDDGLLEKEESSLFCCGVFSGKGSRRSAADKALFKAQGKLAKTQVRARQVLQQLWRDAAAVDAAKKRKEEEEKEKGSMEDVKKALSRWRCTMDLPVKGRRPETTAPRGIDRDKLFELVDEAMSFLPVPTADALLFERNSNSVRTSLASISMCLSSGRSIYKSNSSSAASSEGSSGYLPQSESDMLTDSTPIDTDDDGLLYDDPCAPPPLKMVSQPRGGDASPMYDKQQRPGFVQQKDGHRFINVAPCNERPPHPDPAACEM
SIO_010081: LOC116945494
subclass of: SO_0000673
so part of: LOC116945494
location: complement(join(1802629..1802695,1802920..1803005,1804888..1805216,1805625..1805977,1808687..1808703))
location: region:1802629-1808703:-1
so has part: feature:1808687-1808703:-1:exon
so has part: feature:1805625-1805977:-1:exon
so has part: feature:1804888-1805216:-1:exon
so has part: feature:1802920-1803005:-1:exon
so has part: feature:1802629-1802695:-1:exon

XP_032815727.1
type: Protein
SIO_000068: ncbiprotein

position:1802629:-1
position: 1802629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808703:-1
position: 1808703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1808687-1808703:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1805625-1805977:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1804888-1805216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1802920-1803005:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1802629-1802695:-1:exon

LOC116945495
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945495
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1805826..1815117
location: region:1805826-1815117:1
so has part: feature:1805826-1815117:1:exon
subclass of: SO_0000011

116945495
type: Gene
SIO_000068: ncbigene

position:1805826:1
position: 1805826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1815117:1
position: 1815117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1805826-1815117:1:exon

LOC116945495
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116945495
product: uncharacterized LOC116945495
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004403335.1
SIO_010081: LOC116945495
subclass of: SO_0000673
so part of: LOC116945495
location: join(1805826..1805934,1808670..1808789,1814912..1815117)
location: region:1805826-1815117:1
so has part: feature:1805826-1805934:1:exon
so has part: feature:1808670-1808789:1:exon
so has part: feature:1814912-1815117:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1805826-1805934:1:exon

position:1805934:1
position: 1805934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1808670-1808789:1:exon

position:1808670:1
position: 1808670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1808789:1
position: 1808789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1814912-1815117:1:exon

position:1814912:1
position: 1814912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945496
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1812688..1814068
location: region:1812688-1814068:1
so has part: feature:1812688-1814068:1:exon
subclass of: SO_0000011

116945496
type: Gene
SIO_000068: ncbigene

position:1812688:1
position: 1812688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1814068:1
position: 1814068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1812688-1814068:1:exon

LOC116945496
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116945496
product: uncharacterized LOC116945496
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004403336.1
SIO_010081: LOC116945496
subclass of: SO_0000673
so part of: LOC116945496
location: join(1812688..1813007,1813055..1814068)
location: region:1812688-1814068:1
so has part: feature:1812688-1813007:1:exon
so has part: feature:1813055-1814068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1812688-1813007:1:exon

position:1813007:1
position: 1813007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1813055-1814068:1:exon

position:1813055:1
position: 1813055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945456
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945456
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1839122..1839648)
location: region:1839122-1839648:-1
so has part: feature:1839122-1839648:-1:exon
subclass of: SO_0000011

116945456
type: Gene
SIO_000068: ncbigene

position:1839122:-1
position: 1839122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1839648:-1
position: 1839648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1839122-1839648:-1:exon

LOC116945456
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116945456
product: uncharacterized LOC116945456
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_004403330.1
SIO_010081: LOC116945456
subclass of: SO_0000673
so part of: LOC116945456
location: complement(join(1839122..1839337,1839587..1839648))
location: region:1839122-1839648:-1
so has part: feature:1839587-1839648:-1:exon
so has part: feature:1839122-1839337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1839587-1839648:-1:exon

position:1839587:-1
position: 1839587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1839122-1839337:-1:exon

position:1839337:-1
position: 1839337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945497
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945497
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1844917..1870685)
location: region:1844917-1870685:-1
so has part: feature:1844917-1870685:-1:exon
subclass of: SO_0000010

116945497
type: Gene
SIO_000068: ncbigene

position:1844917:-1
position: 1844917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1870685:-1
position: 1870685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1844917-1870685:-1:exon

LOC116945497
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945497
product: uncharacterized LOC116945497
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032959837.1
SIO_010081: LOC116945497
subclass of: SO_0000673
so part of: LOC116945497
location: complement(join(1844917..1845256,1846658..1846735,1849081..1849110,1850052..1850105,1861081..1861113,1864082..1864150,1867762..1868002,1870479..1870685))
location: region:1844917-1870685:-1
so has part: feature:1870479-1870685:-1:exon
so has part: feature:1867762-1868002:-1:exon
so has part: feature:1864082-1864150:-1:exon
so has part: feature:1861081-1861113:-1:exon
so has part: feature:1850052-1850105:-1:exon
so has part: feature:1849081-1849110:-1:exon
so has part: feature:1846658-1846735:-1:exon
so has part: feature:1844917-1845256:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1870479-1870685:-1:exon

position:1870479:-1
position: 1870479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1867762-1868002:-1:exon

position:1867762:-1
position: 1867762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1868002:-1
position: 1868002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1864082-1864150:-1:exon

position:1864082:-1
position: 1864082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1864150:-1
position: 1864150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1861081-1861113:-1:exon

position:1861081:-1
position: 1861081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1861113:-1
position: 1861113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1850052-1850105:-1:exon

position:1850052:-1
position: 1850052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1850105:-1
position: 1850105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1849081-1849110:-1:exon

position:1849081:-1
position: 1849081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1849110:-1
position: 1849110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1846658-1846735:-1:exon

position:1846658:-1
position: 1846658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1846735:-1
position: 1846735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1844917-1845256:-1:exon

position:1845256:-1
position: 1845256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945497
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945497
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116945497
translation: MAPQRSSCLVTAVLPTLLLLLLVARPCEPCFKCTEAIAVPLKALLNRMEIDRPFIRTKTYKGVQNIISKLLGEHSKRLIYLYEQVEQTMGSKFVEMNNRIGDVSGQLSQKHYAIYWRELIKLWKDFQEALKISKEPSCPVCEPTYVSALRCESCQKENKEVCLSYCERTILEKQRRAPLEVLDDVDPDVIPEPDYDPEFEPTKTSVIALIVIVPAMLCLIVFCIGEPLACSSR
SIO_010081: LOC116945497
subclass of: SO_0000673
so part of: LOC116945497
location: complement(join(1845057..1845256,1846658..1846735,1849081..1849110,1850052..1850105,1861081..1861113,1864082..1864150,1867762..1867999))
location: region:1845057-1867999:-1
so has part: feature:1867762-1867999:-1:exon
so has part: feature:1864082-1864150:-1:exon
so has part: feature:1861081-1861113:-1:exon
so has part: feature:1850052-1850105:-1:exon
so has part: feature:1849081-1849110:-1:exon
so has part: feature:1846658-1846735:-1:exon
so has part: feature:1845057-1845256:-1:exon

XP_032815728.1
type: Protein
SIO_000068: ncbiprotein

position:1845057:-1
position: 1845057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1867999:-1
position: 1867999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1867762-1867999:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1864082-1864150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1861081-1861113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1850052-1850105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1849081-1849110:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1846658-1846735:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1845057-1845256:-1:exon

LOC116945498
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945498
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1876161..1877732)
location: region:1876161-1877732:-1
so has part: feature:1876161-1877732:-1:exon
subclass of: SO_0000011

116945498
type: Gene
SIO_000068: ncbigene

position:1876161:-1
position: 1876161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1877732:-1
position: 1877732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1876161-1877732:-1:exon

LOC116945498
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116945498
product: uncharacterized LOC116945498
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XR_004403337.1
SIO_010081: LOC116945498
subclass of: SO_0000673
so part of: LOC116945498
location: complement(join(1876161..1877110,1877559..1877732))
location: region:1876161-1877732:-1
so has part: feature:1877559-1877732:-1:exon
so has part: feature:1876161-1877110:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1877559-1877732:-1:exon

position:1877559:-1
position: 1877559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1876161-1877110:-1:exon

position:1877110:-1
position: 1877110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945499
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945499
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1904158..1923005
location: region:1904158-1923005:1
so has part: feature:1904158-1923005:1:exon
subclass of: SO_0000011

116945499
type: Gene
SIO_000068: ncbigene

position:1904158:1
position: 1904158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1923005:1
position: 1923005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1904158-1923005:1:exon

LOC116945499
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116945499
product: uncharacterized LOC116945499
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004403338.1
SIO_010081: LOC116945499
subclass of: SO_0000673
so part of: LOC116945499
location: join(1904158..1904630,1920752..1920832,1921522..1921607,1921831..1923005)
location: region:1904158-1923005:1
so has part: feature:1904158-1904630:1:exon
so has part: feature:1920752-1920832:1:exon
so has part: feature:1921522-1921607:1:exon
so has part: feature:1921831-1923005:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1904158-1904630:1:exon

position:1904630:1
position: 1904630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1920752-1920832:1:exon

position:1920752:1
position: 1920752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1920832:1
position: 1920832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1921522-1921607:1:exon

position:1921522:1
position: 1921522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1921607:1
position: 1921607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1921831-1923005:1:exon

position:1921831:1
position: 1921831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945500
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1925887..1929743)
location: region:1925887-1929743:-1
so has part: feature:1925887-1929743:-1:exon
subclass of: SO_0000010

116945500
type: Gene
SIO_000068: ncbigene

position:1925887:-1
position: 1925887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1929743:-1
position: 1929743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1925887-1929743:-1:exon

LOC116945500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945500
product: uncharacterized LOC116945500
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032959838.1
SIO_010081: LOC116945500
subclass of: SO_0000673
so part of: LOC116945500
location: complement(join(1925887..1926272,1926678..1927039,1929621..1929743))
location: region:1925887-1929743:-1
so has part: feature:1929621-1929743:-1:exon
so has part: feature:1926678-1927039:-1:exon
so has part: feature:1925887-1926272:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1929621-1929743:-1:exon

position:1929621:-1
position: 1929621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1926678-1927039:-1:exon

position:1926678:-1
position: 1926678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1927039:-1
position: 1927039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1925887-1926272:-1:exon

position:1926272:-1
position: 1926272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116945500
translation: METSPRQVDIDHIPTATRYNLSPDDGLLEKEESSLFCCGVFSGKGSRRSAADKALFKAQGKLAQTQVRARQVLEQLWRDAAAVDAAKKRKEEEKEKKKGSVEEGDIKKALNRWRCTMDLSVKGRRPETTAPRGIDRDKLIELVDEAMSFLPVHTADVLLFERNSNSVRTSLASISMCLGSGRSIYKSNSSSGASSGGSSGYLPQSESDMLTDSTPIDTDDDGLLYDNPCAPPPLKMVNIRSVWR
SIO_010081: LOC116945500
subclass of: SO_0000673
so part of: LOC116945500
location: complement(join(1925917..1926272,1926678..1927039,1929621..1929637))
location: region:1925917-1929637:-1
so has part: feature:1929621-1929637:-1:exon
so has part: feature:1926678-1927039:-1:exon
so has part: feature:1925917-1926272:-1:exon

XP_032815729.1
type: Protein
SIO_000068: ncbiprotein

position:1925917:-1
position: 1925917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1929637:-1
position: 1929637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1929621-1929637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1926678-1927039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1925917-1926272:-1:exon

LOC116945503
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945503
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1926858..1935991
location: region:1926858-1935991:1
so has part: feature:1926858-1935991:1:exon
subclass of: SO_0000011

116945503
type: Gene
SIO_000068: ncbigene

position:1926858:1
position: 1926858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1935991:1
position: 1935991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1926858-1935991:1:exon

LOC116945503
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116945503
product: uncharacterized LOC116945503
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004403340.1
SIO_010081: LOC116945503
subclass of: SO_0000673
so part of: LOC116945503
location: join(1926858..1926996,1929604..1929723,1934358..1935991)
location: region:1926858-1935991:1
so has part: feature:1926858-1926996:1:exon
so has part: feature:1929604-1929723:1:exon
so has part: feature:1934358-1935991:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1926858-1926996:1:exon

position:1926996:1
position: 1926996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1929604-1929723:1:exon

position:1929604:1
position: 1929604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1929723:1
position: 1929723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1934358-1935991:1:exon

position:1934358:1
position: 1934358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945502
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1931921..1934301
location: region:1931921-1934301:1
so has part: feature:1931921-1934301:1:exon
subclass of: SO_0000011

116945502
type: Gene
SIO_000068: ncbigene

position:1931921:1
position: 1931921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1934301:1
position: 1934301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1931921-1934301:1:exon

LOC116945502
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116945502
product: uncharacterized LOC116945502
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004403339.1
SIO_010081: LOC116945502
subclass of: SO_0000673
so part of: LOC116945502
location: join(1931921..1932438,1932485..1934301)
location: region:1931921-1934301:1
so has part: feature:1931921-1932438:1:exon
so has part: feature:1932485-1934301:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1931921-1932438:1:exon

position:1932438:1
position: 1932438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1932485-1934301:1:exon

position:1932485:1
position: 1932485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945504
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945504
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1971297..1978738)
location: region:1971297-1978738:-1
so has part: feature:1971297-1978738:-1:exon
subclass of: SO_0000010

116945504
type: Gene
SIO_000068: ncbigene

position:1971297:-1
position: 1971297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1978738:-1
position: 1978738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1971297-1978738:-1:exon

LOC116945504
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945504
product: uncharacterized LOC116945504
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032959839.1
SIO_010081: LOC116945504
subclass of: SO_0000673
so part of: LOC116945504
location: complement(join(1971297..1971927,1972152..1972237,1974298..1974626,1975037..1975395,1978616..1978738))
location: region:1971297-1978738:-1
so has part: feature:1978616-1978738:-1:exon
so has part: feature:1975037-1975395:-1:exon
so has part: feature:1974298-1974626:-1:exon
so has part: feature:1972152-1972237:-1:exon
so has part: feature:1971297-1971927:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1978616-1978738:-1:exon

position:1978616:-1
position: 1978616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1975037-1975395:-1:exon

position:1975037:-1
position: 1975037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1975395:-1
position: 1975395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1974298-1974626:-1:exon

position:1974298:-1
position: 1974298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1974626:-1
position: 1974626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1972152-1972237:-1:exon

position:1972152:-1
position: 1972152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1972237:-1
position: 1972237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1971297-1971927:-1:exon

position:1971927:-1
position: 1971927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945504
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945504
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116945504
translation: METSPRQVDIDHIPTATRYNLSPDDGLLEKEESSLFCCGVFSGKGSRRSAADKALFKAQGKLAKTQVRARQVLQQLWRDAAAVDAAKKRKEEEEKEKKKGSMEDVKKALSRWRCTMDLPVKGRRPETTAPRGIDRDKLFELVDEAMSFLPVPTADALLFERNSNSVRTSLASISMCLSSGRSIYKSNSSTGASSGGSSGYLPQSESDMLTDSTPIDTDDDGLLYDDPCAPPPLKMVSQPRGGDASPMYDNQHPPGFVQQKDGHRFINVAPCNERPPHPDPAACEM
SIO_010081: LOC116945504
subclass of: SO_0000673
so part of: LOC116945504
location: complement(join(1971861..1971927,1972152..1972237,1974298..1974626,1975037..1975395,1978616..1978632))
location: region:1971861-1978632:-1
so has part: feature:1978616-1978632:-1:exon
so has part: feature:1975037-1975395:-1:exon
so has part: feature:1974298-1974626:-1:exon
so has part: feature:1972152-1972237:-1:exon
so has part: feature:1971861-1971927:-1:exon

XP_032815730.1
type: Protein
SIO_000068: ncbiprotein

position:1971861:-1
position: 1971861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1978632:-1
position: 1978632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1978616-1978632:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1975037-1975395:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1974298-1974626:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1972152-1972237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1971861-1971927:-1:exon

LOC116945505
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945505
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1975244..1982844
location: region:1975244-1982844:1
so has part: feature:1975244-1982844:1:exon
subclass of: SO_0000011

116945505
type: Gene
SIO_000068: ncbigene

position:1975244:1
position: 1975244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1982844:1
position: 1982844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1975244-1982844:1:exon

LOC116945505
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116945505
product: uncharacterized LOC116945505
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004403341.1
SIO_010081: LOC116945505
subclass of: SO_0000673
so part of: LOC116945505
location: join(1975244..1975352,1978599..1978718,1982701..1982844)
location: region:1975244-1982844:1
so has part: feature:1975244-1975352:1:exon
so has part: feature:1978599-1978718:1:exon
so has part: feature:1982701-1982844:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1975244-1975352:1:exon

position:1975352:1
position: 1975352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1978599-1978718:1:exon

position:1978599:1
position: 1978599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1978718:1
position: 1978718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1982701-1982844:1:exon

position:1982701:1
position: 1982701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945506
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945506
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1989986..2018191)
location: region:1989986-2018191:-1
so has part: feature:1989986-2018191:-1:exon
subclass of: SO_0000010

116945506
type: Gene
SIO_000068: ncbigene

position:1989986:-1
position: 1989986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2018191:-1
position: 2018191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1989986-2018191:-1:exon

LOC116945506
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945506
product: uncharacterized oxidoreductase YjmC-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032959841.1
SIO_010081: LOC116945506
subclass of: SO_0000673
so part of: LOC116945506
location: complement(join(1989986..1990565,1994186..1994296,1995360..1995455,1997882..1998000,1999314..1999449,1999963..2000061,2003515..2003568,2005201..2005262,2006392..2006580,2007285..2007433,2018054..2018191))
location: region:1989986-2018191:-1
so has part: feature:2018054-2018191:-1:exon
so has part: feature:2007285-2007433:-1:exon
so has part: feature:2006392-2006580:-1:exon
so has part: feature:2005201-2005262:-1:exon
so has part: feature:2003515-2003568:-1:exon
so has part: feature:1999963-2000061:-1:exon
so has part: feature:1999314-1999449:-1:exon
so has part: feature:1997882-1998000:-1:exon
so has part: feature:1995360-1995455:-1:exon
so has part: feature:1994186-1994296:-1:exon
so has part: feature:1989986-1990565:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2018054-2018191:-1:exon

position:2018054:-1
position: 2018054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2007285-2007433:-1:exon

position:2007285:-1
position: 2007285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2007433:-1
position: 2007433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2006392-2006580:-1:exon

position:2006392:-1
position: 2006392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2006580:-1
position: 2006580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2005201-2005262:-1:exon

position:2005201:-1
position: 2005201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2005262:-1
position: 2005262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2003515-2003568:-1:exon

position:2003515:-1
position: 2003515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2003568:-1
position: 2003568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1999963-2000061:-1:exon

position:1999963:-1
position: 1999963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2000061:-1
position: 2000061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1999314-1999449:-1:exon

position:1999314:-1
position: 1999314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1999449:-1
position: 1999449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1997882-1998000:-1:exon

position:1997882:-1
position: 1997882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1998000:-1
position: 1998000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1995360-1995455:-1:exon

position:1995360:-1
position: 1995360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1995455:-1
position: 1995455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1994186-1994296:-1:exon

position:1994186:-1
position: 1994186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1994296:-1
position: 1994296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1989986-1990565:-1:exon

position:1990565:-1
position: 1990565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945506
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945506
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized oxidoreductase YjmC-like
translation: MSRCLIPKADVKSFIQQCMVAVKTKPAHAKALADVLVEGDYRGHYSHGLNRMDMYVKDIKSGICEKDGEPTIEKETAATALVNGNNLLGPVVGNFCMDLAMKKATESGVGWVVARGSNHYGIAGFYSMQALEQGMMGMSFTNTSPLVVPTRGMECTLGTNPISVAAPAGKDDSFVLDMATSAVALGKVELHARNQQTIPEGWGCDAKGAVTQDPQKVLDGGGLLALGGAEATGGYKGYGLGMMVEVFCGIMGGATYSNNIRTWRETSRVADLGQCFVAVNLSCFAPGFESRMADLLSIHRHLPPAPGATSVLVPGDPERQHIAECESKGGIPYSVHVVSHMNNVAKELGVAPLPVSVMDK
SIO_010081: LOC116945506
subclass of: SO_0000673
so part of: LOC116945506
location: complement(join(1990506..1990565,1994186..1994296,1995360..1995455,1997882..1998000,1999314..1999449,1999963..2000061,2003515..2003568,2005201..2005262,2006392..2006580,2007285..2007433,2018054..2018061))
location: region:1990506-2018061:-1
so has part: feature:2018054-2018061:-1:exon
so has part: feature:2007285-2007433:-1:exon
so has part: feature:2006392-2006580:-1:exon
so has part: feature:2005201-2005262:-1:exon
so has part: feature:2003515-2003568:-1:exon
so has part: feature:1999963-2000061:-1:exon
so has part: feature:1999314-1999449:-1:exon
so has part: feature:1997882-1998000:-1:exon
so has part: feature:1995360-1995455:-1:exon
so has part: feature:1994186-1994296:-1:exon
so has part: feature:1990506-1990565:-1:exon

XP_032815732.1
type: Protein
SIO_000068: ncbiprotein

position:1990506:-1
position: 1990506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2018061:-1
position: 2018061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2018054-2018061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2007285-2007433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2006392-2006580:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2005201-2005262:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2003515-2003568:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1999963-2000061:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1999314-1999449:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1997882-1998000:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1995360-1995455:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1994186-1994296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1990506-1990565:-1:exon

LOC116945507
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945507
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2028906..2034030
location: region:2028906-2034030:1
so has part: feature:2028906-2034030:1:exon
subclass of: SO_0000011

116945507
type: Gene
SIO_000068: ncbigene

position:2028906:1
position: 2028906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2034030:1
position: 2034030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2028906-2034030:1:exon

LOC116945507
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: lncRNA
gene: LOC116945507
product: uncharacterized LOC116945507
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004403342.1
SIO_010081: LOC116945507
subclass of: SO_0000673
so part of: LOC116945507
location: join(2028906..2029294,2033573..2034030)
location: region:2028906-2034030:1
so has part: feature:2028906-2029294:1:exon
so has part: feature:2033573-2034030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2028906-2029294:1:exon

position:2029294:1
position: 2029294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2033573-2034030:1:exon

position:2033573:1
position: 2033573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945508
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2044950..2053030
location: region:2044950-2053030:1
so has part: feature:2044950-2053030:1:exon
subclass of: SO_0000010

116945508
type: Gene
SIO_000068: ncbigene

position:2044950:1
position: 2044950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2053030:1
position: 2053030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2044950-2053030:1:exon

LOC116945508
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945508
product: insulin-like growth factor II
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_032959842.1
SIO_010081: LOC116945508
subclass of: SO_0000673
so part of: LOC116945508
location: join(2044950..2045172,2046459..2046633,2048927..2049075,2051931..2053030)
location: region:2044950-2053030:1
so has part: feature:2044950-2045172:1:exon
so has part: feature:2046459-2046633:1:exon
so has part: feature:2048927-2049075:1:exon
so has part: feature:2051931-2053030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2044950-2045172:1:exon

position:2045172:1
position: 2045172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2046459-2046633:1:exon

position:2046459:1
position: 2046459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2046633:1
position: 2046633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2048927-2049075:1:exon

position:2048927:1
position: 2048927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2049075:1
position: 2049075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2051931-2053030:1:exon

position:2051931:1
position: 2051931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116945508
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-like growth factor II
translation: MEYKGLASCSLCRFTFRTTRTAAVGCTAARPLTLLAPLLLMLLLGAGNSRPVRASETLCGSELVDALQFVCGDRGFYFVRHPSSRSHGRPKKGIVEECCFSKCDLRLLEMYCAKPAKSERDVRPPSFKDLFKKSMTNKYSNHAAWPEKSHEYGKVLPRSLPAPSELRALREAKRNRQLVTTHRPLVPRQARPARAR
SIO_010081: LOC116945508
subclass of: SO_0000673
so part of: LOC116945508
location: join(2045113..2045172,2046459..2046633,2048927..2049075,2051931..2052137)
location: region:2045113-2052137:1
so has part: feature:2045113-2045172:1:exon
so has part: feature:2046459-2046633:1:exon
so has part: feature:2048927-2049075:1:exon
so has part: feature:2051931-2052137:1:exon

XP_032815733.1
type: Protein
SIO_000068: ncbiprotein

position:2045113:1
position: 2045113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2052137:1
position: 2052137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2045113-2045172:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2046459-2046633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2048927-2049075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2051931-2052137:1:exon

LOC116945509
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2525416..2528785)
location: region:2525416-2528785:-1
so has part: feature:2525416-2528785:-1:exon
subclass of: SO_0000010

116945509
type: Gene
SIO_000068: ncbigene

position:2525416:-1
position: 2525416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2528785:-1
position: 2528785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2525416-2528785:-1:exon

LOC116945509
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945509
product: achaete-scute homolog 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_032959844.1
SIO_010081: LOC116945509
subclass of: SO_0000673
so part of: LOC116945509
location: complement(join(2525416..2526926,2527709..2528785))
location: region:2525416-2528785:-1
so has part: feature:2527709-2528785:-1:exon
so has part: feature:2525416-2526926:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2527709-2528785:-1:exon

position:2527709:-1
position: 2527709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2525416-2526926:-1:exon

position:2526926:-1
position: 2526926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945509
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: achaete-scute homolog 2-like
translation: MMSPVLSRAPFSPHAACLFVCGGGGGGGGPKACQLSSPAPIDVLGGIGSFKQEQQQQQQLAASPQPQPQQPQPQQPPPRSPSPELLRCRRRLGLTAAAAAAGGGVVPHHHHHHHNHHNHNHHHHHNNNHHQQQQQHRAPPVAVARRNERERNRVRLVNMGFAALRERVPPAGAAAAAAAAAAAAATASRRVSKVETLRAAVEYIRALQALLREHDSAVAPSLRAASPATLLMGVGGGGGGGGSAPGSSSCSSSCSLACSVSAGGAGAAAACSSCAASLASCSPGGSSLSDETSSSSSSSSSSSDEPLSPEEQELLDFASWF
SIO_010081: LOC116945509
subclass of: SO_0000673
so part of: LOC116945509
location: complement(2527724..2528689)
location: region:2527724-2528689:-1
so has part: feature:2527724-2528689:-1:exon

XP_032815735.1
type: Protein
SIO_000068: ncbiprotein

position:2527724:-1
position: 2527724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2528689:-1
position: 2528689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2527724-2528689:-1:exon

LOC116945510
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2549759..2619497)
location: region:2549759-2619497:-1
so has part: feature:2549759-2619497:-1:exon
subclass of: SO_0000010

116945510
type: Gene
SIO_000068: ncbigene

position:2549759:-1
position: 2549759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2619497:-1
position: 2619497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2549759-2619497:-1:exon

LOC116945510
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: LOC116945510
product: protein MRVI1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032959845.1
SIO_010081: LOC116945510
subclass of: SO_0000673
so part of: LOC116945510
location: complement(join(2549759..2551520,2553219..2553319,2555959..2556066,2556531..2556586,2561378..2561531,2562085..2562216,2563475..2563615,2564085..2564112,2564837..2564945,2565544..2565640,2568879..2569334,2583205..2583242,2591503..2591595,2595012..2595080,2595796..2595975,2596889..2596962,2599908..2600014,2605090..2605215,2606908..2606989,2612543..2612666,2615356..2615500,2618017..2619497))
location: region:2549759-2619497:-1
so has part: feature:2618017-2619497:-1:exon
so has part: feature:2615356-2615500:-1:exon
so has part: feature:2612543-2612666:-1:exon
so has part: feature:2606908-2606989:-1:exon
so has part: feature:2605090-2605215:-1:exon
so has part: feature:2599908-2600014:-1:exon
so has part: feature:2596889-2596962:-1:exon
so has part: feature:2595796-2595975:-1:exon
so has part: feature:2595012-2595080:-1:exon
so has part: feature:2591503-2591595:-1:exon
so has part: feature:2583205-2583242:-1:exon
so has part: feature:2568879-2569334:-1:exon
so has part: feature:2565544-2565640:-1:exon
so has part: feature:2564837-2564945:-1:exon
so has part: feature:2564085-2564112:-1:exon
so has part: feature:2563475-2563615:-1:exon
so has part: feature:2562085-2562216:-1:exon
so has part: feature:2561378-2561531:-1:exon
so has part: feature:2556531-2556586:-1:exon
so has part: feature:2555959-2556066:-1:exon
so has part: feature:2553219-2553319:-1:exon
so has part: feature:2549759-2551520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2618017-2619497:-1:exon

position:2618017:-1
position: 2618017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2615356-2615500:-1:exon

position:2615356:-1
position: 2615356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2615500:-1
position: 2615500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2612543-2612666:-1:exon

position:2612543:-1
position: 2612543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2612666:-1
position: 2612666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2606908-2606989:-1:exon

position:2606908:-1
position: 2606908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2606989:-1
position: 2606989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2605090-2605215:-1:exon

position:2605090:-1
position: 2605090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2605215:-1
position: 2605215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2599908-2600014:-1:exon

position:2599908:-1
position: 2599908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2600014:-1
position: 2600014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2596889-2596962:-1:exon

position:2596889:-1
position: 2596889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2596962:-1
position: 2596962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2595796-2595975:-1:exon

position:2595796:-1
position: 2595796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2595975:-1
position: 2595975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2595012-2595080:-1:exon

position:2595012:-1
position: 2595012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2595080:-1
position: 2595080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2591503-2591595:-1:exon

position:2591503:-1
position: 2591503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2591595:-1
position: 2591595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2583205-2583242:-1:exon

position:2583205:-1
position: 2583205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2583242:-1
position: 2583242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2568879-2569334:-1:exon

position:2568879:-1
position: 2568879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2569334:-1
position: 2569334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2565544-2565640:-1:exon

position:2565544:-1
position: 2565544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2565640:-1
position: 2565640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2564837-2564945:-1:exon

position:2564837:-1
position: 2564837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2564945:-1
position: 2564945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2564085-2564112:-1:exon

position:2564085:-1
position: 2564085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2564112:-1
position: 2564112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2563475-2563615:-1:exon

position:2563475:-1
position: 2563475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2563615:-1
position: 2563615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2562085-2562216:-1:exon

position:2562085:-1
position: 2562085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2562216:-1
position: 2562216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2561378-2561531:-1:exon

position:2561378:-1
position: 2561378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2561531:-1
position: 2561531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2556531-2556586:-1:exon

position:2556531:-1
position: 2556531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2556586:-1
position: 2556586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2555959-2556066:-1:exon

position:2555959:-1
position: 2555959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2556066:-1
position: 2556066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2553219-2553319:-1:exon

position:2553219:-1
position: 2553219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2553319:-1
position: 2553319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2549759-2551520:-1:exon

position:2551520:-1
position: 2551520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116945510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: LOC116945510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MRVI1-like
translation: MSFTQSATWYKIGGVGNDNGWTHRRRRALPGHEGSPSSSISSLIAERSLRTHRQAATTAAAASSSVAAAAAKKAEGGAGWEVATDKSSLSIQLQKSQPDVVLSLQSRCVVPGRVEGFAAGCAHHSCCPLELRDCSGLASHVGPRPWDTPLIDALTLELLQTHPQLRPSHPRLHPRRPPSPWGRHATTPWPYQHVGTQTEHREGHHAPKSRRVSAATQTSEVMDKPCYCLHPGLWLPPSPSSGAIGVSHSSGLDRIDGAEGAACAARSRLPPGTATPSSPSDASDASPGIDTSGKVQIMPHSFNHRRSIRLSRSSTSSSITSVDEDGRVLDLLRDELPEPLLAEEEHRRNLQLLEDASRASQRFLARPGRRSRHSLSEAASSPGLSPRSTPFPLPSCGTSLAGTPPALPPPLPARVPPLCAPAPCLDSTADAGASAEGGIKKGPKPLVETGGDKEGNVAHATATVQPSLAADKLPGPGPSVQPRGPGEDAAPQTAARMGGPARGSADGGGGGGGPGSVAAGSARETAAQGAKQLTADPSAPGNLKPPSSPRQHKPLLKSNSVTFKFPESSASSPNGDSQATNGLNDGPLLSIKQHKLIKLREGKKQNWCRTVGDQKMPELAEAAERKSDTEDDNEGEVVEASKDAQKPPAKPVVSDKLLHSLQLHRSQASRPSLSEQEVETAFVRLSLAFRNDMFSLEKRLRLEERARNLAEENVSREIDAVSSTVQTFAPLCQDSQTRDTYQQLQQNLQVLRKATMRASSCSEKLGAVNQEGRLCRAMEVMVQHVENLKRLYAREHAELEDVRKLLQHNSRSMHSGSGDSSDEGMARGNRSMSIIGSLGKPTARRRVSVSVIPKFFNFPSGGGNQLASSSGAQPILEARINEVKNQEASIIAPEKIIPAFLAPKETSQPSGRMLVGLTRAALKESPPLIPQGAQGVKIVGARPLNPLAQEKVEEETFVRS
SIO_010081: LOC116945510
subclass of: SO_0000673
so part of: LOC116945510
location: complement(join(2551367..2551520,2553219..2553319,2555959..2556066,2556531..2556586,2561378..2561531,2562085..2562216,2563475..2563615,2564085..2564112,2564837..2564945,2565544..2565640,2568879..2569334,2583205..2583242,2591503..2591595,2595012..2595080,2595796..2595975,2596889..2596962,2599908..2600014,2605090..2605215,2606908..2606989,2612543..2612666,2615356..2615500,2618017..2618325))
location: region:2551367-2618325:-1
so has part: feature:2618017-2618325:-1:exon
so has part: feature:2615356-2615500:-1:exon
so has part: feature:2612543-2612666:-1:exon
so has part: feature:2606908-2606989:-1:exon
so has part: feature:2605090-2605215:-1:exon
so has part: feature:2599908-2600014:-1:exon
so has part: feature:2596889-2596962:-1:exon
so has part: feature:2595796-2595975:-1:exon
so has part: feature:2595012-2595080:-1:exon
so has part: feature:2591503-2591595:-1:exon
so has part: feature:2583205-2583242:-1:exon
so has part: feature:2568879-2569334:-1:exon
so has part: feature:2565544-2565640:-1:exon
so has part: feature:2564837-2564945:-1:exon
so has part: feature:2564085-2564112:-1:exon
so has part: feature:2563475-2563615:-1:exon
so has part: feature:2562085-2562216:-1:exon
so has part: feature:2561378-2561531:-1:exon
so has part: feature:2556531-2556586:-1:exon
so has part: feature:2555959-2556066:-1:exon
so has part: feature:2553219-2553319:-1:exon
so has part: feature:2551367-2551520:-1:exon

XP_032815736.1
type: Protein
SIO_000068: ncbiprotein

position:2551367:-1
position: 2551367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2618325:-1
position: 2618325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2618017-2618325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2615356-2615500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2612543-2612666:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2606908-2606989:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2605090-2605215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2599908-2600014:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2596889-2596962:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2595796-2595975:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2595012-2595080:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2591503-2591595:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2583205-2583242:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2568879-2569334:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2565544-2565640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2564837-2564945:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2564085-2564112:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2563475-2563615:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2562085-2562216:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2561378-2561531:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2556531-2556586:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2555959-2556066:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2553219-2553319:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2551367-2551520:-1:exon

LOC116945683
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: LOC116945683
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2666575..2666679)
location: region:2666575-2666679:-1
so has part: feature:2666575-2666679:-1:exon
subclass of: SO_0000623

116945683
type: Gene
SIO_000068: ncbigene

position:2666575:-1
position: 2666575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2666679:-1
position: 2666679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2666575-2666679:-1:exon

LOC116945683
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 7757
nc RNA class: snRNA
gene: LOC116945683
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004403359.1
SIO_010081: LOC116945683
subclass of: SO_0000673
so part of: LOC116945683
location: complement(2666575..2666679)
location: region:2666575-2666679:-1
so has part: feature:2666575-2666679:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2666575-2666679:-1:exon

USP47
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: USP47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2693809..2786497)
location: region:2693809-2786497:-1
so has part: feature:2693809-2786497:-1:exon
subclass of: SO_0000010

116945511
type: Gene
SIO_000068: ncbigene

position:2693809:-1
position: 2693809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2786497:-1
position: 2786497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2693809-2786497:-1:exon

USP47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: USP47
product: ubiquitin specific peptidase 47, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_032959850.1
SIO_010081: USP47
subclass of: SO_0000673
so part of: USP47
location: complement(join(2693809..2695262,2696470..2696600,2698207..2698254,2699370..2699500,2700007..2700125,2700798..2700913,2702284..2702364,2706587..2706762,2710387..2711560,2712482..2712601,2713172..2713287,2715065..2715272,2727642..2727746,2728631..2728743,2728918..2728973,2729949..2730025,2731075..2731209,2735503..2735670,2736006..2736161,2737473..2737568,2738630..2738779,2740875..2740954,2741988..2742133,2743534..2743630,2747896..2748052,2750581..2750706,2752505..2752693,2786275..2786497))
location: region:2693809-2786497:-1
so has part: feature:2786275-2786497:-1:exon
so has part: feature:2752505-2752693:-1:exon
so has part: feature:2750581-2750706:-1:exon
so has part: feature:2747896-2748052:-1:exon
so has part: feature:2743534-2743630:-1:exon
so has part: feature:2741988-2742133:-1:exon
so has part: feature:2740875-2740954:-1:exon
so has part: feature:2738630-2738779:-1:exon
so has part: feature:2737473-2737568:-1:exon
so has part: feature:2736006-2736161:-1:exon
so has part: feature:2735503-2735670:-1:exon
so has part: feature:2731075-2731209:-1:exon
so has part: feature:2729949-2730025:-1:exon
so has part: feature:2728918-2728973:-1:exon
so has part: feature:2728631-2728743:-1:exon
so has part: feature:2727642-2727746:-1:exon
so has part: feature:2715065-2715272:-1:exon
so has part: feature:2713172-2713287:-1:exon
so has part: feature:2712482-2712601:-1:exon
so has part: feature:2710387-2711560:-1:exon
so has part: feature:2706587-2706762:-1:exon
so has part: feature:2702284-2702364:-1:exon
so has part: feature:2700798-2700913:-1:exon
so has part: feature:2700007-2700125:-1:exon
so has part: feature:2699370-2699500:-1:exon
so has part: feature:2698207-2698254:-1:exon
so has part: feature:2696470-2696600:-1:exon
so has part: feature:2693809-2695262:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2786275-2786497:-1:exon

position:2786275:-1
position: 2786275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2752505-2752693:-1:exon

position:2752505:-1
position: 2752505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2752693:-1
position: 2752693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2750581-2750706:-1:exon

position:2750581:-1
position: 2750581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2750706:-1
position: 2750706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2747896-2748052:-1:exon

position:2747896:-1
position: 2747896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2748052:-1
position: 2748052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2743534-2743630:-1:exon

position:2743534:-1
position: 2743534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2743630:-1
position: 2743630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2741988-2742133:-1:exon

position:2741988:-1
position: 2741988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2742133:-1
position: 2742133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2740875-2740954:-1:exon

position:2740875:-1
position: 2740875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2740954:-1
position: 2740954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2738630-2738779:-1:exon

position:2738630:-1
position: 2738630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2738779:-1
position: 2738779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2737473-2737568:-1:exon

position:2737473:-1
position: 2737473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2737568:-1
position: 2737568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2736006-2736161:-1:exon

position:2736006:-1
position: 2736006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2736161:-1
position: 2736161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2735503-2735670:-1:exon

position:2735503:-1
position: 2735503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2735670:-1
position: 2735670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2731075-2731209:-1:exon

position:2731075:-1
position: 2731075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2731209:-1
position: 2731209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2729949-2730025:-1:exon

position:2729949:-1
position: 2729949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2730025:-1
position: 2730025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2728918-2728973:-1:exon

position:2728918:-1
position: 2728918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2728973:-1
position: 2728973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2728631-2728743:-1:exon

position:2728631:-1
position: 2728631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2728743:-1
position: 2728743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2727642-2727746:-1:exon

position:2727642:-1
position: 2727642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2727746:-1
position: 2727746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2715065-2715272:-1:exon

position:2715065:-1
position: 2715065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2715272:-1
position: 2715272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2713172-2713287:-1:exon

position:2713172:-1
position: 2713172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2713287:-1
position: 2713287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2712482-2712601:-1:exon

position:2712482:-1
position: 2712482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2712601:-1
position: 2712601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2710387-2711560:-1:exon

position:2710387:-1
position: 2710387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2711560:-1
position: 2711560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2706587-2706762:-1:exon

position:2706587:-1
position: 2706587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2706762:-1
position: 2706762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2702284-2702364:-1:exon

position:2702284:-1
position: 2702284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2702364:-1
position: 2702364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2700798-2700913:-1:exon

position:2700798:-1
position: 2700798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2700913:-1
position: 2700913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2700007-2700125:-1:exon

position:2700007:-1
position: 2700007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2700125:-1
position: 2700125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2699370-2699500:-1:exon

position:2699370:-1
position: 2699370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2699500:-1
position: 2699500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2698207-2698254:-1:exon

position:2698207:-1
position: 2698207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2698254:-1
position: 2698254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2696470-2696600:-1:exon

position:2696470:-1
position: 2696470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2696600:-1
position: 2696600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2693809-2695262:-1:exon

position:2695262:-1
position: 2695262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

USP47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: USP47
product: ubiquitin specific peptidase 47, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_032959849.1
SIO_010081: USP47
subclass of: SO_0000673
so part of: USP47
location: complement(join(2693809..2695262,2696470..2696600,2698207..2698254,2699370..2699500,2700007..2700125,2700798..2700913,2702284..2702364,2706587..2706762,2710387..2711560,2712482..2712601,2713172..2713287,2715065..2715272,2727642..2727746,2728631..2728743,2728918..2728973,2729949..2730025,2731075..2731209,2735503..2735670,2736006..2736161,2737473..2737568,2738630..2738779,2740875..2740954,2741988..2742133,2743534..2743630,2747896..2748052,2750581..2750706,2752505..2752696,2786275..2786497))
location: region:2693809-2786497:-1
so has part: feature:2786275-2786497:-1:exon
so has part: feature:2752505-2752696:-1:exon
so has part: feature:2750581-2750706:-1:exon
so has part: feature:2747896-2748052:-1:exon
so has part: feature:2743534-2743630:-1:exon
so has part: feature:2741988-2742133:-1:exon
so has part: feature:2740875-2740954:-1:exon
so has part: feature:2738630-2738779:-1:exon
so has part: feature:2737473-2737568:-1:exon
so has part: feature:2736006-2736161:-1:exon
so has part: feature:2735503-2735670:-1:exon
so has part: feature:2731075-2731209:-1:exon
so has part: feature:2729949-2730025:-1:exon
so has part: feature:2728918-2728973:-1:exon
so has part: feature:2728631-2728743:-1:exon
so has part: feature:2727642-2727746:-1:exon
so has part: feature:2715065-2715272:-1:exon
so has part: feature:2713172-2713287:-1:exon
so has part: feature:2712482-2712601:-1:exon
so has part: feature:2710387-2711560:-1:exon
so has part: feature:2706587-2706762:-1:exon
so has part: feature:2702284-2702364:-1:exon
so has part: feature:2700798-2700913:-1:exon
so has part: feature:2700007-2700125:-1:exon
so has part: feature:2699370-2699500:-1:exon
so has part: feature:2698207-2698254:-1:exon
so has part: feature:2696470-2696600:-1:exon
so has part: feature:2693809-2695262:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2786275-2786497:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2752505-2752696:-1:exon

position:2752696:-1
position: 2752696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2750581-2750706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2747896-2748052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2743534-2743630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741988-2742133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2740875-2740954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2738630-2738779:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2737473-2737568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2736006-2736161:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2735503-2735670:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2731075-2731209:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2729949-2730025:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2728918-2728973:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2728631-2728743:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2727642-2727746:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2715065-2715272:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2713172-2713287:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2712482-2712601:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2710387-2711560:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2706587-2706762:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2702284-2702364:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2700798-2700913:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2700007-2700125:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2699370-2699500:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2698207-2698254:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2696470-2696600:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2693809-2695262:-1:exon

USP47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: USP47
product: ubiquitin specific peptidase 47, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032959847.1
SIO_010081: USP47
subclass of: SO_0000673
so part of: USP47
location: complement(join(2693809..2695262,2696470..2696600,2698207..2698254,2699370..2699500,2700007..2700125,2700798..2700913,2702284..2702364,2706587..2706762,2710387..2711560,2712482..2712601,2713172..2713287,2715065..2715272,2727642..2727746,2728631..2728743,2728918..2728973,2729949..2730025,2731075..2731209,2735503..2735670,2736006..2736161,2737473..2737568,2738630..2738779,2740875..2740954,2741988..2742133,2743534..2743630,2747896..2748052,2750581..2750706,2752505..2752696,2757589..2757657,2786275..2786497))
location: region:2693809-2786497:-1
so has part: feature:2786275-2786497:-1:exon
so has part: feature:2757589-2757657:-1:exon
so has part: feature:2752505-2752696:-1:exon
so has part: feature:2750581-2750706:-1:exon
so has part: feature:2747896-2748052:-1:exon
so has part: feature:2743534-2743630:-1:exon
so has part: feature:2741988-2742133:-1:exon
so has part: feature:2740875-2740954:-1:exon
so has part: feature:2738630-2738779:-1:exon
so has part: feature:2737473-2737568:-1:exon
so has part: feature:2736006-2736161:-1:exon
so has part: feature:2735503-2735670:-1:exon
so has part: feature:2731075-2731209:-1:exon
so has part: feature:2729949-2730025:-1:exon
so has part: feature:2728918-2728973:-1:exon
so has part: feature:2728631-2728743:-1:exon
so has part: feature:2727642-2727746:-1:exon
so has part: feature:2715065-2715272:-1:exon
so has part: feature:2713172-2713287:-1:exon
so has part: feature:2712482-2712601:-1:exon
so has part: feature:2710387-2711560:-1:exon
so has part: feature:2706587-2706762:-1:exon
so has part: feature:2702284-2702364:-1:exon
so has part: feature:2700798-2700913:-1:exon
so has part: feature:2700007-2700125:-1:exon
so has part: feature:2699370-2699500:-1:exon
so has part: feature:2698207-2698254:-1:exon
so has part: feature:2696470-2696600:-1:exon
so has part: feature:2693809-2695262:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2786275-2786497:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2757589-2757657:-1:exon

position:2757589:-1
position: 2757589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2757657:-1
position: 2757657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2752505-2752696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2750581-2750706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2747896-2748052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2743534-2743630:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2741988-2742133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2740875-2740954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2738630-2738779:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2737473-2737568:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2736006-2736161:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2735503-2735670:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2731075-2731209:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2729949-2730025:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2728918-2728973:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2728631-2728743:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2727642-2727746:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2715065-2715272:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2713172-2713287:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2712482-2712601:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2710387-2711560:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2706587-2706762:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2702284-2702364:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2700798-2700913:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2700007-2700125:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2699370-2699500:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2698207-2698254:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2696470-2696600:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2693809-2695262:-1:exon

USP47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: USP47
product: ubiquitin specific peptidase 47, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_032959846.1
SIO_010081: USP47
subclass of: SO_0000673
so part of: USP47
location: complement(join(2693809..2695262,2696470..2696600,2698207..2698254,2699370..2699500,2700007..2700125,2700798..2700913,2702284..2702364,2706587..2706762,2710387..2711560,2712482..2712601,2713172..2713287,2715065..2715272,2727642..2727746,2728631..2728743,2728918..2728973,2729949..2730025,2731075..2731209,2735503..2735670,2736006..2736161,2737473..2737568,2738630..2738779,2740875..2740954,2741988..2742133,2743534..2743630,2747896..2748052,2750581..2750706,2752505..2752696,2766348..2767139))
location: region:2693809-2767139:-1
so has part: feature:2766348-2767139:-1:exon
so has part: feature:2752505-2752696:-1:exon
so has part: feature:2750581-2750706:-1:exon
so has part: feature:2747896-2748052:-1:exon
so has part: feature:2743534-2743630:-1:exon
so has part: feature:2741988-2742133:-1:exon
so has part: feature:2740875-2740954:-1:exon
so has part: feature:2738630-2738779:-1:exon
so has part: feature:2737473-2737568:-1:exon
so has part: feature:2736006-2736161:-1:exon
so has part: feature:2735503-2735670:-1:exon
so has part: feature:2731075-2731209:-1:exon
so has part: feature:2729949-2730025:-1:exon
so has part: feature:2728918-2728973:-1:exon
so has part: feature:2728631-2728743:-1:exon
so has part: feature:2727642-2727746:-1:exon
so has part: feature:2715065-2715272:-1:exon
so has part: feature:2713172-2713287:-1:exon
so has part: feature:2712482-2712601:-1:exon
so has part: feature:2710387-2711560:-1:exon
so has part: feature:2706587-2706762:-1:exon
so has part: feature:2702284-2702364:-1:exon
so has part: feature:2700798-2700913:-1:exon
so has part: feature:2700007-2700125:-1:exon
so has part: feature:2699370-2699500:-1:exon
so has part: feature:2698207-2698254:-1:exon
so has part: feature:2696470-2696600:-1:exon
so has part: feature:2693809-2695262:-1:exon

position:2767139:-1
position: 2767139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2766348-2767139:-1:exon

position:2766348:-1
position: 2766348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2752505-2752696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2750581-2750706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2747896-2748052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2743534-2743630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741988-2742133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2740875-2740954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2738630-2738779:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2737473-2737568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2736006-2736161:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2735503-2735670:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2731075-2731209:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2729949-2730025:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2728918-2728973:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2728631-2728743:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2727642-2727746:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2715065-2715272:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2713172-2713287:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2712482-2712601:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2710387-2711560:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2706587-2706762:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2702284-2702364:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2700798-2700913:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2700007-2700125:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2699370-2699500:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2698207-2698254:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2696470-2696600:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2693809-2695262:-1:exon

USP47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: USP47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 47 isoform X4
translation: MSLGEENQLVPKQANAAEEARVLCIVTDTTRSDTQRITVNLPSSTPLRELQAHVAAEASYQAATFLLVWKHDEHAKEPLNGESEESLKDAGFAEGKKNYLHLTDKNGIQPLPAPQPPPDDTGGTKEPGGGGDVDENGLEKVTSSPPSESVATCANDPAGPAYGVLCKSETGYVGLVNQAMTCYLNSLLQTLYMTPEFRNALYKWEFDGSEEEGDKSIPFQLQRLFVQLQTSRKRAVETTDLTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKNTEQANLINVLYQGQLKDYVRCLECGHESSRLDTYLDIPLAIRPFGSNQAYSSVEEALQAFVQPETLDGTNQYFCERCSKKCDAHKGLEFLYFPYLLSLQLKRFDFDYSTLHRIKLNDRMTFPDHLDLNAFIEAPDEEKCGQADSCADSGAENEGSCHSDQLLTDFSYADAVDEGIDLENTSMGERNCKPVLAKQGPWVYELFSIMVHSGSAAGGHYYAYIKSFSDGQWYSFNDQHVNRITQDDIRKTYGGATGNRSYYSSTFSSSTNAYMLIYRQIQPSKNAKFMEVTNFPQHIHHLMNGEKEREENEKRQREIERNTCKIKLFCLHPVKNTMVESKLEVHKDRTLEQATHLAHKLLDLDDVLPVERCRLVKYDEFHDSLERSYEGEEGTQMGTLLGGVKSSYVFDLLLETRREDQDFQPYKPGGVTVKVHVVDLLTEAVSPGVSIRAYLSQSVSEFKALIAQATGLNVEGMRVVLERYYNDLRLLSVPNKSLKSEGFFRSNKVFVESSGSPDSQLSFPQSLLWRLLDRHGNTIRLLVALPDGPAAATATRAGAAAAAAAAAAAAAAAAAAEGQAERAARGRDSERSERGSRNRAVEAILEESTERLRSLSLEQERRAARRRENGDADAAAGSSPPPPRRGGDGLRPGVADGAAAPSDGEIRGRVGPPDSDSETNNEQSAGSLCDSDATTGSPSQDVDSSASAGSRENEDGRATPPEAGPELERDPDSRCHSDERSDSELNNERSTSSVDSDLLSSSHSSDTLCNVAAAAAAAAAAAAEAAAGTPSAGTHDDDAAASSSSSSSAVPVAGMVLPNGLDAYTGITSSRRSKSLAGVDTAKAKKEGRERRERGSGSESEGEDEGKEREGGAGAAQAYTFFRAEEGPAEEGTAGDRFRCLTVHVDKRMTLAAFKRHLEPVVGVSSSQFKVFRVYANNQEFESVRLNETLSSFSDDNRVTIRLGRALRKGEYRVKVYQLLLKEPEPCKFLLDTVFAKGMSVRQSKEELLPQLQQQCALHLNIDRFRLRKKTWKNPGTIFLDTQTYEDDIPIFSNWEVFLELLEAPERMVCMSQLAVLARRWKPSTLLLEPFEEVVLESNSVDELKEKLGKLGQMSPEDVEFAKGRGTFPCDISVLEIHQDLDWNPKVTTLNVWPLYICDDGAVVFYRNRDEAIQELSDEQRSELQKKESMRLQRTGGQQVPYSPRKEKALKIYVDGGVTRE
SIO_010081: USP47
subclass of: SO_0000673
so part of: USP47
location: complement(join(2695097..2695262,2696470..2696600,2698207..2698254,2699370..2699500,2700007..2700125,2700798..2700913,2702284..2702364,2706587..2706762,2710387..2711560,2712482..2712601,2713172..2713287,2715065..2715272,2727642..2727746,2728631..2728743,2728918..2728973,2729949..2730025,2731075..2731209,2735503..2735670,2736006..2736161,2737473..2737568,2738630..2738779,2740875..2740954,2741988..2742133,2743534..2743630,2747896..2748052,2750581..2750706,2752505..2752693,2786275..2786313))
location: region:2695097-2786313:-1
so has part: feature:2786275-2786313:-1:exon
so has part: feature:2752505-2752693:-1:exon
so has part: feature:2750581-2750706:-1:exon
so has part: feature:2747896-2748052:-1:exon
so has part: feature:2743534-2743630:-1:exon
so has part: feature:2741988-2742133:-1:exon
so has part: feature:2740875-2740954:-1:exon
so has part: feature:2738630-2738779:-1:exon
so has part: feature:2737473-2737568:-1:exon
so has part: feature:2736006-2736161:-1:exon
so has part: feature:2735503-2735670:-1:exon
so has part: feature:2731075-2731209:-1:exon
so has part: feature:2729949-2730025:-1:exon
so has part: feature:2728918-2728973:-1:exon
so has part: feature:2728631-2728743:-1:exon
so has part: feature:2727642-2727746:-1:exon
so has part: feature:2715065-2715272:-1:exon
so has part: feature:2713172-2713287:-1:exon
so has part: feature:2712482-2712601:-1:exon
so has part: feature:2710387-2711560:-1:exon
so has part: feature:2706587-2706762:-1:exon
so has part: feature:2702284-2702364:-1:exon
so has part: feature:2700798-2700913:-1:exon
so has part: feature:2700007-2700125:-1:exon
so has part: feature:2699370-2699500:-1:exon
so has part: feature:2698207-2698254:-1:exon
so has part: feature:2696470-2696600:-1:exon
so has part: feature:2695097-2695262:-1:exon

XP_032815741.1
type: Protein
SIO_000068: ncbiprotein

position:2695097:-1
position: 2695097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2786313:-1
position: 2786313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2786275-2786313:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2752505-2752693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2750581-2750706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2747896-2748052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2743534-2743630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741988-2742133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2740875-2740954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2738630-2738779:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2737473-2737568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2736006-2736161:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2735503-2735670:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2731075-2731209:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2729949-2730025:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2728918-2728973:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2728631-2728743:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2727642-2727746:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2715065-2715272:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2713172-2713287:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2712482-2712601:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2710387-2711560:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2706587-2706762:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2702284-2702364:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2700798-2700913:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2700007-2700125:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2699370-2699500:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2698207-2698254:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2696470-2696600:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2695097-2695262:-1:exon

USP47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: USP47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 47 isoform X3
translation: MSLGEENQLVPKQKANAAEEARVLCIVTDTTRSDTQRITVNLPSSTPLRELQAHVAAEASYQAATFLLVWKHDEHAKEPLNGESEESLKDAGFAEGKKNYLHLTDKNGIQPLPAPQPPPDDTGGTKEPGGGGDVDENGLEKVTSSPPSESVATCANDPAGPAYGVLCKSETGYVGLVNQAMTCYLNSLLQTLYMTPEFRNALYKWEFDGSEEEGDKSIPFQLQRLFVQLQTSRKRAVETTDLTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKNTEQANLINVLYQGQLKDYVRCLECGHESSRLDTYLDIPLAIRPFGSNQAYSSVEEALQAFVQPETLDGTNQYFCERCSKKCDAHKGLEFLYFPYLLSLQLKRFDFDYSTLHRIKLNDRMTFPDHLDLNAFIEAPDEEKCGQADSCADSGAENEGSCHSDQLLTDFSYADAVDEGIDLENTSMGERNCKPVLAKQGPWVYELFSIMVHSGSAAGGHYYAYIKSFSDGQWYSFNDQHVNRITQDDIRKTYGGATGNRSYYSSTFSSSTNAYMLIYRQIQPSKNAKFMEVTNFPQHIHHLMNGEKEREENEKRQREIERNTCKIKLFCLHPVKNTMVESKLEVHKDRTLEQATHLAHKLLDLDDVLPVERCRLVKYDEFHDSLERSYEGEEGTQMGTLLGGVKSSYVFDLLLETRREDQDFQPYKPGGVTVKVHVVDLLTEAVSPGVSIRAYLSQSVSEFKALIAQATGLNVEGMRVVLERYYNDLRLLSVPNKSLKSEGFFRSNKVFVESSGSPDSQLSFPQSLLWRLLDRHGNTIRLLVALPDGPAAATATRAGAAAAAAAAAAAAAAAAAAEGQAERAARGRDSERSERGSRNRAVEAILEESTERLRSLSLEQERRAARRRENGDADAAAGSSPPPPRRGGDGLRPGVADGAAAPSDGEIRGRVGPPDSDSETNNEQSAGSLCDSDATTGSPSQDVDSSASAGSRENEDGRATPPEAGPELERDPDSRCHSDERSDSELNNERSTSSVDSDLLSSSHSSDTLCNVAAAAAAAAAAAAEAAAGTPSAGTHDDDAAASSSSSSSAVPVAGMVLPNGLDAYTGITSSRRSKSLAGVDTAKAKKEGRERRERGSGSESEGEDEGKEREGGAGAAQAYTFFRAEEGPAEEGTAGDRFRCLTVHVDKRMTLAAFKRHLEPVVGVSSSQFKVFRVYANNQEFESVRLNETLSSFSDDNRVTIRLGRALRKGEYRVKVYQLLLKEPEPCKFLLDTVFAKGMSVRQSKEELLPQLQQQCALHLNIDRFRLRKKTWKNPGTIFLDTQTYEDDIPIFSNWEVFLELLEAPERMVCMSQLAVLARRWKPSTLLLEPFEEVVLESNSVDELKEKLGKLGQMSPEDVEFAKGRGTFPCDISVLEIHQDLDWNPKVTTLNVWPLYICDDGAVVFYRNRDEAIQELSDEQRSELQKKESMRLQRTGGQQVPYSPRKEKALKIYVDGGVTRE
SIO_010081: USP47
subclass of: SO_0000673
so part of: USP47
location: complement(join(2695097..2695262,2696470..2696600,2698207..2698254,2699370..2699500,2700007..2700125,2700798..2700913,2702284..2702364,2706587..2706762,2710387..2711560,2712482..2712601,2713172..2713287,2715065..2715272,2727642..2727746,2728631..2728743,2728918..2728973,2729949..2730025,2731075..2731209,2735503..2735670,2736006..2736161,2737473..2737568,2738630..2738779,2740875..2740954,2741988..2742133,2743534..2743630,2747896..2748052,2750581..2750706,2752505..2752696,2786275..2786313))
location: region:2695097-2786313:-1
so has part: feature:2786275-2786313:-1:exon
so has part: feature:2752505-2752696:-1:exon
so has part: feature:2750581-2750706:-1:exon
so has part: feature:2747896-2748052:-1:exon
so has part: feature:2743534-2743630:-1:exon
so has part: feature:2741988-2742133:-1:exon
so has part: feature:2740875-2740954:-1:exon
so has part: feature:2738630-2738779:-1:exon
so has part: feature:2737473-2737568:-1:exon
so has part: feature:2736006-2736161:-1:exon
so has part: feature:2735503-2735670:-1:exon
so has part: feature:2731075-2731209:-1:exon
so has part: feature:2729949-2730025:-1:exon
so has part: feature:2728918-2728973:-1:exon
so has part: feature:2728631-2728743:-1:exon
so has part: feature:2727642-2727746:-1:exon
so has part: feature:2715065-2715272:-1:exon
so has part: feature:2713172-2713287:-1:exon
so has part: feature:2712482-2712601:-1:exon
so has part: feature:2710387-2711560:-1:exon
so has part: feature:2706587-2706762:-1:exon
so has part: feature:2702284-2702364:-1:exon
so has part: feature:2700798-2700913:-1:exon
so has part: feature:2700007-2700125:-1:exon
so has part: feature:2699370-2699500:-1:exon
so has part: feature:2698207-2698254:-1:exon
so has part: feature:2696470-2696600:-1:exon
so has part: feature:2695097-2695262:-1:exon

XP_032815740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2786275-2786313:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2752505-2752696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2750581-2750706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2747896-2748052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2743534-2743630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741988-2742133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2740875-2740954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2738630-2738779:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2737473-2737568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2736006-2736161:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2735503-2735670:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2731075-2731209:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2729949-2730025:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2728918-2728973:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2728631-2728743:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2727642-2727746:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2715065-2715272:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2713172-2713287:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2712482-2712601:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2710387-2711560:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2706587-2706762:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2702284-2702364:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2700798-2700913:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2700007-2700125:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2699370-2699500:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2698207-2698254:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2696470-2696600:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2695097-2695262:-1:exon

USP47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: USP47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 47 isoform X2
translation: MSLGEENQLVPKQAASWGCKQILLEELKRKLSHKAEKANAAEEARVLCIVTDTTRSDTQRITVNLPSSTPLRELQAHVAAEASYQAATFLLVWKHDEHAKEPLNGESEESLKDAGFAEGKKNYLHLTDKNGIQPLPAPQPPPDDTGGTKEPGGGGDVDENGLEKVTSSPPSESVATCANDPAGPAYGVLCKSETGYVGLVNQAMTCYLNSLLQTLYMTPEFRNALYKWEFDGSEEEGDKSIPFQLQRLFVQLQTSRKRAVETTDLTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKNTEQANLINVLYQGQLKDYVRCLECGHESSRLDTYLDIPLAIRPFGSNQAYSSVEEALQAFVQPETLDGTNQYFCERCSKKCDAHKGLEFLYFPYLLSLQLKRFDFDYSTLHRIKLNDRMTFPDHLDLNAFIEAPDEEKCGQADSCADSGAENEGSCHSDQLLTDFSYADAVDEGIDLENTSMGERNCKPVLAKQGPWVYELFSIMVHSGSAAGGHYYAYIKSFSDGQWYSFNDQHVNRITQDDIRKTYGGATGNRSYYSSTFSSSTNAYMLIYRQIQPSKNAKFMEVTNFPQHIHHLMNGEKEREENEKRQREIERNTCKIKLFCLHPVKNTMVESKLEVHKDRTLEQATHLAHKLLDLDDVLPVERCRLVKYDEFHDSLERSYEGEEGTQMGTLLGGVKSSYVFDLLLETRREDQDFQPYKPGGVTVKVHVVDLLTEAVSPGVSIRAYLSQSVSEFKALIAQATGLNVEGMRVVLERYYNDLRLLSVPNKSLKSEGFFRSNKVFVESSGSPDSQLSFPQSLLWRLLDRHGNTIRLLVALPDGPAAATATRAGAAAAAAAAAAAAAAAAAAEGQAERAARGRDSERSERGSRNRAVEAILEESTERLRSLSLEQERRAARRRENGDADAAAGSSPPPPRRGGDGLRPGVADGAAAPSDGEIRGRVGPPDSDSETNNEQSAGSLCDSDATTGSPSQDVDSSASAGSRENEDGRATPPEAGPELERDPDSRCHSDERSDSELNNERSTSSVDSDLLSSSHSSDTLCNVAAAAAAAAAAAAEAAAGTPSAGTHDDDAAASSSSSSSAVPVAGMVLPNGLDAYTGITSSRRSKSLAGVDTAKAKKEGRERRERGSGSESEGEDEGKEREGGAGAAQAYTFFRAEEGPAEEGTAGDRFRCLTVHVDKRMTLAAFKRHLEPVVGVSSSQFKVFRVYANNQEFESVRLNETLSSFSDDNRVTIRLGRALRKGEYRVKVYQLLLKEPEPCKFLLDTVFAKGMSVRQSKEELLPQLQQQCALHLNIDRFRLRKKTWKNPGTIFLDTQTYEDDIPIFSNWEVFLELLEAPERMVCMSQLAVLARRWKPSTLLLEPFEEVVLESNSVDELKEKLGKLGQMSPEDVEFAKGRGTFPCDISVLEIHQDLDWNPKVTTLNVWPLYICDDGAVVFYRNRDEAIQELSDEQRSELQKKESMRLQRTGGQQVPYSPRKEKALKIYVDGGVTRE
SIO_010081: USP47
subclass of: SO_0000673
so part of: USP47
location: complement(join(2695097..2695262,2696470..2696600,2698207..2698254,2699370..2699500,2700007..2700125,2700798..2700913,2702284..2702364,2706587..2706762,2710387..2711560,2712482..2712601,2713172..2713287,2715065..2715272,2727642..2727746,2728631..2728743,2728918..2728973,2729949..2730025,2731075..2731209,2735503..2735670,2736006..2736161,2737473..2737568,2738630..2738779,2740875..2740954,2741988..2742133,2743534..2743630,2747896..2748052,2750581..2750706,2752505..2752696,2757589..2757657,2786275..2786313))
location: region:2695097-2786313:-1
so has part: feature:2786275-2786313:-1:exon
so has part: feature:2757589-2757657:-1:exon
so has part: feature:2752505-2752696:-1:exon
so has part: feature:2750581-2750706:-1:exon
so has part: feature:2747896-2748052:-1:exon
so has part: feature:2743534-2743630:-1:exon
so has part: feature:2741988-2742133:-1:exon
so has part: feature:2740875-2740954:-1:exon
so has part: feature:2738630-2738779:-1:exon
so has part: feature:2737473-2737568:-1:exon
so has part: feature:2736006-2736161:-1:exon
so has part: feature:2735503-2735670:-1:exon
so has part: feature:2731075-2731209:-1:exon
so has part: feature:2729949-2730025:-1:exon
so has part: feature:2728918-2728973:-1:exon
so has part: feature:2728631-2728743:-1:exon
so has part: feature:2727642-2727746:-1:exon
so has part: feature:2715065-2715272:-1:exon
so has part: feature:2713172-2713287:-1:exon
so has part: feature:2712482-2712601:-1:exon
so has part: feature:2710387-2711560:-1:exon
so has part: feature:2706587-2706762:-1:exon
so has part: feature:2702284-2702364:-1:exon
so has part: feature:2700798-2700913:-1:exon
so has part: feature:2700007-2700125:-1:exon
so has part: feature:2699370-2699500:-1:exon
so has part: feature:2698207-2698254:-1:exon
so has part: feature:2696470-2696600:-1:exon
so has part: feature:2695097-2695262:-1:exon

XP_032815738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2786275-2786313:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2757589-2757657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2752505-2752696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2750581-2750706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2747896-2748052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2743534-2743630:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2741988-2742133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2740875-2740954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2738630-2738779:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2737473-2737568:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2736006-2736161:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2735503-2735670:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2731075-2731209:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2729949-2730025:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2728918-2728973:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2728631-2728743:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2727642-2727746:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2715065-2715272:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2713172-2713287:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2712482-2712601:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2710387-2711560:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2706587-2706762:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2702284-2702364:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2700798-2700913:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2700007-2700125:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2699370-2699500:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2698207-2698254:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2696470-2696600:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2695097-2695262:-1:exon

USP47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: USP47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 47 isoform X1
translation: MQTSMDRWRSQLNKRHLSVYKTILTVVRVSRLSKRLHSKKANAAEEARVLCIVTDTTRSDTQRITVNLPSSTPLRELQAHVAAEASYQAATFLLVWKHDEHAKEPLNGESEESLKDAGFAEGKKNYLHLTDKNGIQPLPAPQPPPDDTGGTKEPGGGGDVDENGLEKVTSSPPSESVATCANDPAGPAYGVLCKSETGYVGLVNQAMTCYLNSLLQTLYMTPEFRNALYKWEFDGSEEEGDKSIPFQLQRLFVQLQTSRKRAVETTDLTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKNTEQANLINVLYQGQLKDYVRCLECGHESSRLDTYLDIPLAIRPFGSNQAYSSVEEALQAFVQPETLDGTNQYFCERCSKKCDAHKGLEFLYFPYLLSLQLKRFDFDYSTLHRIKLNDRMTFPDHLDLNAFIEAPDEEKCGQADSCADSGAENEGSCHSDQLLTDFSYADAVDEGIDLENTSMGERNCKPVLAKQGPWVYELFSIMVHSGSAAGGHYYAYIKSFSDGQWYSFNDQHVNRITQDDIRKTYGGATGNRSYYSSTFSSSTNAYMLIYRQIQPSKNAKFMEVTNFPQHIHHLMNGEKEREENEKRQREIERNTCKIKLFCLHPVKNTMVESKLEVHKDRTLEQATHLAHKLLDLDDVLPVERCRLVKYDEFHDSLERSYEGEEGTQMGTLLGGVKSSYVFDLLLETRREDQDFQPYKPGGVTVKVHVVDLLTEAVSPGVSIRAYLSQSVSEFKALIAQATGLNVEGMRVVLERYYNDLRLLSVPNKSLKSEGFFRSNKVFVESSGSPDSQLSFPQSLLWRLLDRHGNTIRLLVALPDGPAAATATRAGAAAAAAAAAAAAAAAAAAEGQAERAARGRDSERSERGSRNRAVEAILEESTERLRSLSLEQERRAARRRENGDADAAAGSSPPPPRRGGDGLRPGVADGAAAPSDGEIRGRVGPPDSDSETNNEQSAGSLCDSDATTGSPSQDVDSSASAGSRENEDGRATPPEAGPELERDPDSRCHSDERSDSELNNERSTSSVDSDLLSSSHSSDTLCNVAAAAAAAAAAAAEAAAGTPSAGTHDDDAAASSSSSSSAVPVAGMVLPNGLDAYTGITSSRRSKSLAGVDTAKAKKEGRERRERGSGSESEGEDEGKEREGGAGAAQAYTFFRAEEGPAEEGTAGDRFRCLTVHVDKRMTLAAFKRHLEPVVGVSSSQFKVFRVYANNQEFESVRLNETLSSFSDDNRVTIRLGRALRKGEYRVKVYQLLLKEPEPCKFLLDTVFAKGMSVRQSKEELLPQLQQQCALHLNIDRFRLRKKTWKNPGTIFLDTQTYEDDIPIFSNWEVFLELLEAPERMVCMSQLAVLARRWKPSTLLLEPFEEVVLESNSVDELKEKLGKLGQMSPEDVEFAKGRGTFPCDISVLEIHQDLDWNPKVTTLNVWPLYICDDGAVVFYRNRDEAIQELSDEQRSELQKKESMRLQRTGGQQVPYSPRKEKALKIYVDGGVTRE
SIO_010081: USP47
subclass of: SO_0000673
so part of: USP47
location: complement(join(2695097..2695262,2696470..2696600,2698207..2698254,2699370..2699500,2700007..2700125,2700798..2700913,2702284..2702364,2706587..2706762,2710387..2711560,2712482..2712601,2713172..2713287,2715065..2715272,2727642..2727746,2728631..2728743,2728918..2728973,2729949..2730025,2731075..2731209,2735503..2735670,2736006..2736161,2737473..2737568,2738630..2738779,2740875..2740954,2741988..2742133,2743534..2743630,2747896..2748052,2750581..2750706,2752505..2752696,2766348..2766464))
location: region:2695097-2766464:-1
so has part: feature:2766348-2766464:-1:exon
so has part: feature:2752505-2752696:-1:exon
so has part: feature:2750581-2750706:-1:exon
so has part: feature:2747896-2748052:-1:exon
so has part: feature:2743534-2743630:-1:exon
so has part: feature:2741988-2742133:-1:exon
so has part: feature:2740875-2740954:-1:exon
so has part: feature:2738630-2738779:-1:exon
so has part: feature:2737473-2737568:-1:exon
so has part: feature:2736006-2736161:-1:exon
so has part: feature:2735503-2735670:-1:exon
so has part: feature:2731075-2731209:-1:exon
so has part: feature:2729949-2730025:-1:exon
so has part: feature:2728918-2728973:-1:exon
so has part: feature:2728631-2728743:-1:exon
so has part: feature:2727642-2727746:-1:exon
so has part: feature:2715065-2715272:-1:exon
so has part: feature:2713172-2713287:-1:exon
so has part: feature:2712482-2712601:-1:exon
so has part: feature:2710387-2711560:-1:exon
so has part: feature:2706587-2706762:-1:exon
so has part: feature:2702284-2702364:-1:exon
so has part: feature:2700798-2700913:-1:exon
so has part: feature:2700007-2700125:-1:exon
so has part: feature:2699370-2699500:-1:exon
so has part: feature:2698207-2698254:-1:exon
so has part: feature:2696470-2696600:-1:exon
so has part: feature:2695097-2695262:-1:exon

XP_032815737.1
type: Protein
SIO_000068: ncbiprotein

position:2766464:-1
position: 2766464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2766348-2766464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2752505-2752696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2750581-2750706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2747896-2748052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2743534-2743630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2741988-2742133:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2740875-2740954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2738630-2738779:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2737473-2737568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2736006-2736161:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2735503-2735670:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2731075-2731209:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2729949-2730025:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2728918-2728973:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2728631-2728743:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2727642-2727746:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2715065-2715272:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2713172-2713287:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2712482-2712601:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2710387-2711560:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2706587-2706762:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2702284-2702364:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2700798-2700913:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2700007-2700125:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2699370-2699500:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2698207-2698254:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2696470-2696600:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2695097-2695262:-1:exon

RPL10A
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: RPL10A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2789872..2797663
location: region:2789872-2797663:1
so has part: feature:2789872-2797663:1:exon
subclass of: SO_0000010

116945512
type: Gene
SIO_000068: ncbigene

position:2789872:1
position: 2789872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2797663:1
position: 2797663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2789872-2797663:1:exon

RPL10A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: RPL10A
product: ribosomal protein L10a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96 ESTs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_032959851.1
SIO_010081: RPL10A
subclass of: SO_0000673
so part of: RPL10A
location: join(2789872..2790015,2791962..2792033,2793220..2793300,2794589..2794737,2796605..2796777,2797393..2797663)
location: region:2789872-2797663:1
so has part: feature:2789872-2790015:1:exon
so has part: feature:2791962-2792033:1:exon
so has part: feature:2793220-2793300:1:exon
so has part: feature:2794589-2794737:1:exon
so has part: feature:2796605-2796777:1:exon
so has part: feature:2797393-2797663:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2789872-2790015:1:exon

position:2790015:1
position: 2790015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2791962-2792033:1:exon

position:2791962:1
position: 2791962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2792033:1
position: 2792033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2793220-2793300:1:exon

position:2793220:1
position: 2793220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2793300:1
position: 2793300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2794589-2794737:1:exon

position:2794589:1
position: 2794589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2794737:1
position: 2794737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2796605-2796777:1:exon

position:2796605:1
position: 2796605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2796777:1
position: 2796777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2797393-2797663:1:exon

position:2797393:1
position: 2797393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL10A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: RPL10A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L10a
translation: MSKVSRDTLHEAVRELLLGSQKNRKRFRETVELQISLKNYDPQKDKRFSGTVRLKNTPRPKFSVCLLGDQQHCDEAEAANIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMASKVDEVKSTIKFQMKKVLCLAVAVGHVKMTEDELVSNLHLAINFLVSLLKKNWQNVRALYLKSTMGRPQRLY
SIO_010081: RPL10A
subclass of: SO_0000673
so part of: RPL10A
location: join(2790011..2790015,2791962..2792033,2793220..2793300,2794589..2794737,2796605..2796777,2797393..2797563)
location: region:2790011-2797563:1
so has part: feature:2790011-2790015:1:exon
so has part: feature:2791962-2792033:1:exon
so has part: feature:2793220-2793300:1:exon
so has part: feature:2794589-2794737:1:exon
so has part: feature:2796605-2796777:1:exon
so has part: feature:2797393-2797563:1:exon

XP_032815742.1
type: Protein
SIO_000068: ncbiprotein

position:2790011:1
position: 2790011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2797563:1
position: 2797563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2790011-2790015:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2791962-2792033:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2793220-2793300:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2794589-2794737:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2796605-2796777:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2797393-2797563:1:exon

PSMD13
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: PSMD13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2799323..2813016)
location: region:2799323-2813016:-1
so has part: feature:2799323-2813016:-1:exon
subclass of: SO_0000010

116945513
type: Gene
SIO_000068: ncbigene

position:2799323:-1
position: 2799323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2813016:-1
position: 2813016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2799323-2813016:-1:exon

PSMD13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: PSMD13
product: proteasome 26S subunit, non-ATPase 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_032959852.1
SIO_010081: PSMD13
subclass of: SO_0000673
so part of: PSMD13
location: complement(join(2799323..2800178,2801406..2801522,2801877..2801957,2804662..2804724,2805257..2805382,2806262..2806341,2806674..2806845,2807415..2807501,2808120..2808163,2809824..2809879,2810005..2810039,2811218..2811296,2812805..2813016))
location: region:2799323-2813016:-1
so has part: feature:2812805-2813016:-1:exon
so has part: feature:2811218-2811296:-1:exon
so has part: feature:2810005-2810039:-1:exon
so has part: feature:2809824-2809879:-1:exon
so has part: feature:2808120-2808163:-1:exon
so has part: feature:2807415-2807501:-1:exon
so has part: feature:2806674-2806845:-1:exon
so has part: feature:2806262-2806341:-1:exon
so has part: feature:2805257-2805382:-1:exon
so has part: feature:2804662-2804724:-1:exon
so has part: feature:2801877-2801957:-1:exon
so has part: feature:2801406-2801522:-1:exon
so has part: feature:2799323-2800178:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2812805-2813016:-1:exon

position:2812805:-1
position: 2812805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2811218-2811296:-1:exon

position:2811218:-1
position: 2811218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2811296:-1
position: 2811296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2810005-2810039:-1:exon

position:2810005:-1
position: 2810005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2810039:-1
position: 2810039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2809824-2809879:-1:exon

position:2809824:-1
position: 2809824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2809879:-1
position: 2809879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2808120-2808163:-1:exon

position:2808120:-1
position: 2808120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2808163:-1
position: 2808163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2807415-2807501:-1:exon

position:2807415:-1
position: 2807415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2807501:-1
position: 2807501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2806674-2806845:-1:exon

position:2806674:-1
position: 2806674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2806845:-1
position: 2806845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2806262-2806341:-1:exon

position:2806262:-1
position: 2806262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2806341:-1
position: 2806341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2805257-2805382:-1:exon

position:2805257:-1
position: 2805257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2805382:-1
position: 2805382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2804662-2804724:-1:exon

position:2804662:-1
position: 2804662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2804724:-1
position: 2804724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2801877-2801957:-1:exon

position:2801877:-1
position: 2801877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2801957:-1
position: 2801957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2801406-2801522:-1:exon

position:2801406:-1
position: 2801406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2801522:-1
position: 2801522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2799323-2800178:-1:exon

position:2800178:-1
position: 2800178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMD13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: PSMD13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome non-ATPase regulatory subunit 13
translation: MRDVTAFLKQQQCKSAPELAAEWQRLEELYNKKLWHQLTLHITTFVQHPSFSEGDGLLKMYENFLCDFEHRVNPLSLVEIILHIIKQITDPNEALQFLEKTKEKVKGNDEAVILCKTSIGVLKMQQNELQDTKKLVEEVGETLDSLPGVTSVHSRFYDLSSRYYQLMGDHASYYKDALRYLGCIDIKDILVTEQQERAFTLGLAGLLGEGVYNFGELLMHPVLESVRKTDKQWLIDTLYAFNSGNVEEFQALKPKWGTQPDLAANESKLLKKIQLLCIMEMTFTRPANNRQLTFQEISTKAKLPVNEVELLVMKALSAGLAKGSIDEVDKKVHMNWVQPRVLNLQQIAGMKERLDSWCDNVKNMAVLVEDRAHDILT
SIO_010081: PSMD13
subclass of: SO_0000673
so part of: PSMD13
location: complement(join(2800083..2800178,2801406..2801522,2801877..2801957,2804662..2804724,2805257..2805382,2806262..2806341,2806674..2806845,2807415..2807501,2808120..2808163,2809824..2809879,2810005..2810039,2811218..2811296,2812805..2812902))
location: region:2800083-2812902:-1
so has part: feature:2812805-2812902:-1:exon
so has part: feature:2811218-2811296:-1:exon
so has part: feature:2810005-2810039:-1:exon
so has part: feature:2809824-2809879:-1:exon
so has part: feature:2808120-2808163:-1:exon
so has part: feature:2807415-2807501:-1:exon
so has part: feature:2806674-2806845:-1:exon
so has part: feature:2806262-2806341:-1:exon
so has part: feature:2805257-2805382:-1:exon
so has part: feature:2804662-2804724:-1:exon
so has part: feature:2801877-2801957:-1:exon
so has part: feature:2801406-2801522:-1:exon
so has part: feature:2800083-2800178:-1:exon

XP_032815743.1
type: Protein
SIO_000068: ncbiprotein

position:2800083:-1
position: 2800083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2812902:-1
position: 2812902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2812805-2812902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2811218-2811296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2810005-2810039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2809824-2809879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2808120-2808163:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2807415-2807501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2806674-2806845:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2806262-2806341:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2805257-2805382:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2804662-2804724:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2801877-2801957:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2801406-2801522:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2800083-2800178:-1:exon

SINHCAF
type: Gene
subclass of: SO_0000704
RO_0002162: 7757
gene: SINHCAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2815158..2837428)
location: region:2815158-2837428:-1
so has part: feature:2815158-2837428:-1:exon
subclass of: SO_0000010

116945514
type: Gene
SIO_000068: ncbigene

position:2815158:-1
position: 2815158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2837428:-1
position: 2837428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2815158-2837428:-1:exon

SINHCAF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: SINHCAF
product: SIN3-HDAC complex associated factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032959853.1
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: complement(join(2815158..2821211,2823575..2823725,2824918..2825044,2827156..2827255,2828160..2828360,2837117..2837428))
location: region:2815158-2837428:-1
so has part: feature:2837117-2837428:-1:exon
so has part: feature:2828160-2828360:-1:exon
so has part: feature:2827156-2827255:-1:exon
so has part: feature:2824918-2825044:-1:exon
so has part: feature:2823575-2823725:-1:exon
so has part: feature:2815158-2821211:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2837117-2837428:-1:exon

position:2837117:-1
position: 2837117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2828160-2828360:-1:exon

position:2828160:-1
position: 2828160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2828360:-1
position: 2828360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2827156-2827255:-1:exon

position:2827156:-1
position: 2827156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2827255:-1
position: 2827255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2824918-2825044:-1:exon

position:2824918:-1
position: 2824918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2825044:-1
position: 2825044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2823575-2823725:-1:exon

position:2823575:-1
position: 2823575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2823725:-1
position: 2823725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2815158-2821211:-1:exon

position:2821211:-1
position: 2821211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SINHCAF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: SINHCAF
product: SIN3-HDAC complex associated factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_032959855.1
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: complement(join(2815158..2821211,2823575..2823725,2824918..2825044,2827156..2827255,2828160..2828364,2837117..2837426))
location: region:2815158-2837426:-1
so has part: feature:2837117-2837426:-1:exon
so has part: feature:2828160-2828364:-1:exon
so has part: feature:2827156-2827255:-1:exon
so has part: feature:2824918-2825044:-1:exon
so has part: feature:2823575-2823725:-1:exon
so has part: feature:2815158-2821211:-1:exon

position:2837426:-1
position: 2837426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2837117-2837426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2828160-2828364:-1:exon

position:2828364:-1
position: 2828364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2827156-2827255:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2824918-2825044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2823575-2823725:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2815158-2821211:-1:exon

SINHCAF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 7757
gene: SINHCAF
product: SIN3-HDAC complex associated factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032959854.1
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: complement(join(2815158..2821211,2823575..2823725,2824918..2825044,2827156..2827255,2828160..2828364,2828534..2830835))
location: region:2815158-2830835:-1
so has part: feature:2828534-2830835:-1:exon
so has part: feature:2828160-2828364:-1:exon
so has part: feature:2827156-2827255:-1:exon
so has part: feature:2824918-2825044:-1:exon
so has part: feature:2823575-2823725:-1:exon
so has part: feature:2815158-2821211:-1:exon

position:2830835:-1
position: 2830835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2828534-2830835:-1:exon

position:2828534:-1
position: 2828534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2828160-2828364:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2827156-2827255:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2824918-2825044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2823575-2823725:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2815158-2821211:-1:exon

SINHCAF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: SINHCAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SIN3-HDAC complex-associated factor isoform X1
translation: MLSGCAGACAPTCIELASQVGVVVLRSAGRTTPRQAPSSVSSQLAPPRLLSLRLRRPRSDCYCCDADDDDSGRASSTEACRRAVWIAGPPCPPPHHPPLHTTMFGFHRPKMYRSTDGCCICKAKSSSSRFTDSRRYQGDFKSCFGLTEARTGDICNACVLLVKRWKKLPAGSTRNWNHVVDARAGPGLKVAMKPKKMKSPFVGPKSVGQIHRIKQQLKRQSSDAHSTASSASPSQSPSYSPHSDEGSDVELGHSSTPDPALACLDRSYWKRQKVCCGIVYMGLCGEVLIDPHLFKPCCGDRPPAMPPPATPVIAAAVATAAAITGSPAAAAAAALAANPVTPQLRDDEEDW
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: complement(join(2820968..2821211,2823575..2823725,2824918..2825044,2827156..2827255,2828160..2828360,2837117..2837349))
location: region:2820968-2837349:-1
so has part: feature:2837117-2837349:-1:exon
so has part: feature:2828160-2828360:-1:exon
so has part: feature:2827156-2827255:-1:exon
so has part: feature:2824918-2825044:-1:exon
so has part: feature:2823575-2823725:-1:exon
so has part: feature:2820968-2821211:-1:exon

XP_032815744.1
type: Protein
SIO_000068: ncbiprotein

position:2820968:-1
position: 2820968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2837349:-1
position: 2837349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2837117-2837349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2828160-2828360:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2827156-2827255:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2824918-2825044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2823575-2823725:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2820968-2821211:-1:exon

SINHCAF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 7757
gene: SINHCAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SIN3-HDAC complex-associated factor isoform X2
translation: MGIGYYAIERLELRRACGNEHHTTRDASGCDPGRACRRAVWIAGPPCPPPHHPPLHTTMFGFHRPKMYRSTDGCCICKAKSSSSRFTDSRRYQGDFKSCFGLTEARTGDICNACVLLVKRWKKLPAGSTRNWNHVVDARAGPGLKVAMKPKKMKSPFVGPKSVGQIHRIKQQLKRQSSDAHSTASSASPSQSPSYSPHSDEGSDVELGHSSTPDPALACLDRSYWKRQKVCCGIVYMGLCGEVLIDPHLFKPCCGDRPPAMPPPATPVIAAAVATAAAITGSPAAAAAAALAANPVTPQLRDDEEDW
SIO_010081: SINHCAF
subclass of: SO_0000673
so part of: SINHCAF
location: complement(join(2820968..2821211,2823575..2823725,2824918..2825044,2827156..2827255,2828160..2828364,2828534..2828630))
location: region:2820968-2828630:-1
so has part: feature:2828534-2828630:-1:exon
so has part: feature:2828160-2828364:-1:exon
so has part: feature:2827156-2827255:-1:exon
so has part: feature:2824918-2825044:-1:exon
so has part: feature:2823575-2823725:-1:exon
so has part: feature:2820968-2821211:-1:exon

XP_032815745.1
type: Protein
SIO_000068: ncbiprotein

position:2828630:-1
position: 2828630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2828534-2828630:-1:exon