Thioflavicoccus mobilis 8321 plasmid pTHIMO01, complete sequence.
type: Entry
definition: Thioflavicoccus mobilis 8321 plasmid pTHIMO01, complete sequence.
sequence version: NC_019941.1
sequence date: 2023-05-03
sequence: sequence
division: CON
label: NC_019941.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02232063
keyword: GSC:MIGS:2.1
keyword: RefSeq
source: Thioflavicoccus mobilis 8321
organism: Thioflavicoccus mobilis 8321
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP003052.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4090915\nSource DNA and organism available from Donald A. Bryant\n(dab14@psu.edu)\nContacts: Donald A. Bryant (dab14@psu.edu)\n Tanja Woyke (microbe@cuba.jgi-psf.org)\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. it is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##MIGS-Data-START##\ninvestigation_type :: bacteria_archaea\nproject_name :: Thioflavicoccus mobilis 8321\ncollection_date :: Missing\nlat_lon :: 41.526 -70.673\ndepth :: Missing\nalt_elev :: Missing\ncountry :: USA\nenvironment :: Marsh, Mat\nnum_replicons :: 2\nref_biomaterial :: ATCC 700959\nbiotic_relationship :: Missing\ntrophic_level :: Missing\nrel_to_oxygen :: Missing\nisol_growth_condt :: 11211246\nsequencing_meth :: WGS\nassembly :: Newbler v. 2.3 (pre-release)\nfinishing_strategy :: Finished\nGOLD Stamp ID :: Gi06843\nType Strain :: Yes\nFunding Program :: DOE-CSP 2010\nGene Calling Method :: GenePrimp 1.4, Prodigal\nIsolation Site :: flat, laminated microbial mat in a salt\n marsh near Woods Hole, Massachusetts, USA.\nCell Shape :: Coccus-shaped\nMotility :: Motile\n##MIGS-Data-END##\n\n##Genome-Assembly-Data-START##\nFinishing Goal :: Finished\nCurrent Finishing Status :: Finished\nAssembly Method :: Newbler v. 2.3\nGenome Coverage :: 30x\nSequencing Technology :: 454/Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annota…

sequence
subclass of: SO_0000155
sequence length: 88600
topology: circular
so has quality: SO_0000988
location: 1..88600
location: region:1-88600:1
RO_0002162: 765912

NC_019941
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02232063
type: BioSample
SIO_000068: biosample

1
title: Complete sequence of plasmid of Thioflavicoccus mobilis 8321
author: Lucas, S.
author: Han, J.
author: Lapidus, A.
author: Cheng, J.-F.
author: Goodwin, L.
author: Pitluck, S.
author: Peters, L.
author: Ovchinnikova, G.
author: Lu, M.
author: Detter, J.C.
author: Han, C.
author: Tapia, R.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Ivanova, N.
author: Pagani, I.
author: Vogl, K.
author: Liu, Z.
author: Imhoff, J.
author: Thiel, V.
author: Frigaard, N.-U.
author: Bryant, D.
author: Woyke, T.
journal: Unpublished

2
title: Direct Submission
author: Lucas, S.
author: Han, J.
author: Lapidus, A.
author: Cheng, J.-F.
author: Goodwin, L.
author: Pitluck, S.
author: Peters, L.
author: Ovchinnikova, G.
author: Lu, M.
author: Detter, J.C.
author: Han, C.
author: Tapia, R.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Ivanova, N.
author: Pagani, I.
author: Vogl, K.
author: Liu, Z.
author: Imhoff, J.
author: Thiel, V.
author: Frigaard, N.-U.
author: Bryant, D.
author: Woyke, T.
journal: Submitted (09-SEP-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88600:1
position: 88600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-88600:1:source
so part of: sequence
organism: Thioflavicoccus mobilis 8321
mol type: genomic DNA
strain: 8321
isolation source: flat, laminated microbial mat in a salt marsh
type material: type strain of Thioflavicoccus mobilis
plasmid: pTHIMO01
country: USA
lat lon: 41.526 N 70.673 W

765912
type: Taxonomy
SIO_000068: taxonomy

THIMO_RS17605
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17605
old locus tag: Thimo_3704
pseudo: true
so part of: sequence
location: complement(29..>247)
location: region:29-247:-1
so has part: feature:29-247:-1:exon
subclass of: SO_0000010

position:29:-1
position: 29
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247:-1
position: 247
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29-247:-1:exon

THIMO_RS17605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17605
old locus tag: Thimo_3704
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011417544.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: THIMO_RS17605
subclass of: SO_0000673
so part of: THIMO_RS17605
location: complement(29..>247)
location: region:29-247:-1
so has part: feature:29-247:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29-247:-1:exon

THIMO_RS17610
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17610
old locus tag: Thimo_3705
so part of: sequence
location: 734..1639
location: region:734-1639:1
so has part: feature:734-1639:1:exon
subclass of: SO_0000010

position:734:1
position: 734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1639:1
position: 1639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734-1639:1:exon

THIMO_RS17610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17610
old locus tag: Thimo_3705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007192777.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MGRPGITREQVFETASAIAHEGTTPTVMAVRKRLGGGSPNNITKWLGEWKAQHETTRVEALPPLPEPVEAAMRQVWGSAWKGAQDQLESEREALSAARKEIERERAEMLAEISRLDGELEAARAETQERDKALDAARRSHDETRAELREARVLVEERSRRIDEQAAEIQEARRQSSEAQAQTKRLEADLAHLNRELGEARQRADQEAKARSKLAGELDRVQADNRRLSDEIKRAGESAKQAKAALDLGGKKIAKLEGALDEERQARASAERETAELRVQVATLTERTARVEELHALIERLK
SIO_010081: THIMO_RS17610
subclass of: SO_0000673
so part of: THIMO_RS17610
location: 734..1639
location: region:734-1639:1
so has part: feature:734-1639:1:exon

WP_015282485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:734-1639:1:exon

THIMO_RS17615
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17615
old locus tag: Thimo_3706
so part of: sequence
location: complement(1680..2726)
location: region:1680-2726:-1
so has part: feature:1680-2726:-1:exon
subclass of: SO_0000010

position:1680:-1
position: 1680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2726:-1
position: 2726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1680-2726:-1:exon

THIMO_RS17615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17615
old locus tag: Thimo_3706
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009147190.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MIQTSTLQITPEILALVAEIDEFKGAWRALGTLAPERLSALRRVATIESIGSSTRIEGSRLSDREVEQLLSNLEIQSFGSRDEQEVAGYAQLMETVFASWQEITVTENHIKQLHRDLLRFSDKDERHRGEYKTTSNSVAAFDAEGNQVGVVFETANPFETPRRMAELVDWLDQAQQGELHPLIAIGIFVVVFLEIHPFQDGNGRLSRVLTTLLLLRAGYAYVPYSSLESVIEQSKEGYYLALRRTQGTICTEAPDWTPWLTFFLKALQRQMRRLRQKVERERLLLAKLPDLAIQILDHARDHGRITIADAVTVTGASRNTLKGHFKTLCERELLVLHGQGRGAWYSLP
SIO_010081: THIMO_RS17615
subclass of: SO_0000673
so part of: THIMO_RS17615
location: complement(1680..2726)
location: region:1680-2726:-1
so has part: feature:1680-2726:-1:exon

WP_015282486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1680-2726:-1:exon

THIMO_RS17620
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17620
old locus tag: Thimo_3707
so part of: sequence
location: 3224..4108
location: region:3224-4108:1
so has part: feature:3224-4108:1:exon
subclass of: SO_0000010

position:3224:1
position: 3224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4108:1
position: 4108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3224-4108:1:exon

THIMO_RS17620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17620
old locus tag: Thimo_3707
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTPNHPWSFRQRLRTRAFGWRGSKLAIERLKDALGEIKTVARTDPETAAEGAVLLMERLWPALQAVDSSSGALGNATSKTVHELIEILLAAPKEGARLERQLDRLWTAIEEDGVDYLSEVRDRWGELCRTPGRASRAADDFLPALRLSWTPEHRGYYRGTMSCLSCLLAAGRHQELLDLIETAPFLWWRYRRYGVRALAAQGRIDEAIAYAERSLGLNDGPSNMARTCEAILLAAGRGEDAYRRFAYTANRAGSHLATFRAIKKKYPDKAPRAILDDLIAQTPGEEGKWFATA
SIO_010081: THIMO_RS17620
subclass of: SO_0000673
so part of: THIMO_RS17620
location: 3224..4108
location: region:3224-4108:1
so has part: feature:3224-4108:1:exon

WP_051022049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3224-4108:1:exon

THIMO_RS18585
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS18585
so part of: sequence
location: 4157..4447
location: region:4157-4447:1
so has part: feature:4157-4447:1:exon
subclass of: SO_0000010

position:4157:1
position: 4157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4447:1
position: 4447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4157-4447:1:exon

THIMO_RS18585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS18585
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDIGTLLRAARDHLDREPAFTLDTATTALSWMAAGHGYDLRAGDIWQAMGYALHAAEALGRVESTRGLIQALAQDQGTDAFVRERLVNGTTDVPGH
SIO_010081: THIMO_RS18585
subclass of: SO_0000673
so part of: THIMO_RS18585
location: 4157..4447
location: region:4157-4447:1
so has part: feature:4157-4447:1:exon

WP_051022051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4157-4447:1:exon

THIMO_RS17625
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17625
old locus tag: Thimo_3710
so part of: sequence
location: 6691..7797
location: region:6691-7797:1
so has part: feature:6691-7797:1:exon
subclass of: SO_0000010

position:6691:1
position: 6691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7797:1
position: 7797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6691-7797:1:exon

THIMO_RS17625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17625
old locus tag: Thimo_3710
inference: COORDINATES: protein motif:HMM:TIGR00238.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KamA family radical SAM protein
translation: MPTLPNESHTSQQNRWPDWKWQLRHRIKDASSLQPYFQPTPEEEQAISNASFPFAITPYYASLIDASDPRDPLRRAIIPSIAEQYLGSMAQADPCEEDAHEVVPRLVHRYPDRALLLPTSECPVYCRYCTRSRWVGSTAPPINEDSLLNATQYLREHSEIRDVLISGGDPLLLSDQRISHILSSLSRIPSIDIIRIGTKTATALPMRFTDNLVSILRNFQPLWLQLHFCHPQELTAEVIAACKKLADAGVPLTAQVVLLRGVNNDTSILQLLFRRLIQLRVRPYYLYQCDPVPNAMHFRTSVQSGLTIMKQLQGRTTGFAIPTYVIDAPNGGGKIPLQSSYITSISDSEVVLRNYEDLPYIYPNTNID
SIO_010081: THIMO_RS17625
subclass of: SO_0000673
so part of: THIMO_RS17625
location: 6691..7797
location: region:6691-7797:1
so has part: feature:6691-7797:1:exon

WP_015282489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6691-7797:1:exon

THIMO_RS19420
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS19420
old locus tag: Thimo_3711
so part of: sequence
location: complement(7826..8827)
location: region:7826-8827:-1
so has part: feature:7826-8827:-1:exon
subclass of: SO_0000010

position:7826:-1
position: 7826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8827:-1
position: 8827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7826-8827:-1:exon

THIMO_RS19420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS19420
old locus tag: Thimo_3711
inference: COORDINATES: protein motif:HMM:NF019121.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-grasp enzyme, D-alanine-D-alanine ligase
translation: MRVVLVENIVQAVLAGESRDIASDREMEVIPGLVADALTTRGHDVSILPANWDLPANIGKVEVDIVLNLAEGFAGSNGHEWLVPAILEQAGVPYTGADAGNILLTRDKLVTKTLLAAHNVTVPRHQIIRRHSDLSVREIGFPIIAKPLREEASIGIGKDSVVVTEAQWKRRVEILLEIYKQPVLCEEYVQGREFSIGVWGNNHVEALPMVEFVFPCVDPLQRFRSFEHKWLGDQEVMVAAEGVADVLREQASTIACLAHRVLNCRDYSRADFRLSADGRLFFLEHNYNPGIGPNTHGLSNTFTRQAELAGFSYEAFLEKLMEIARGRYQGLER
SIO_010081: THIMO_RS19420
subclass of: SO_0000673
so part of: THIMO_RS19420
location: complement(7826..8827)
location: region:7826-8827:-1
so has part: feature:7826-8827:-1:exon

WP_015282490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7826-8827:-1:exon

THIMO_RS19425
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS19425
old locus tag: Thimo_3712
so part of: sequence
location: complement(8827..9915)
location: region:8827-9915:-1
so has part: feature:8827-9915:-1:exon
subclass of: SO_0000010

position:9915:-1
position: 9915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8827-9915:-1:exon

THIMO_RS19425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS19425
old locus tag: Thimo_3712
inference: COORDINATES: protein motif:HMM:NF014476.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ornithine cyclodeaminase, mu-crystallin
translation: MPLDSAITILTAADIVHMLSERHAELKDIVIKVYTEFGRGTIAVPPAAFLRPKANRPERFIALPAYLAYGDAVAGVKWIGSFPRNTDDGLERASAVIVLNSPADGRPLALLEGATISAIRTAMSALVLVETIRKDRNVSRIGVIGCGRIAFAVCRLLATEYGCLKGPLVYDADSKRAQRFAQVLKELEIAADVVSLPSQGEILRDCQVVVFATTATEPHLALPDPNVAGQVILHLSLRDIEPESMWDAINIVDSQEHAFREGTSLGLARRLARGNNMEVVEISDLLAKERRIDVERGTRIIFSPFGLGALDVALAHYVWRRSAILGVGVQVPGFLGTSWNDAKAHGEESASIKQQCGVQESK
SIO_010081: THIMO_RS19425
subclass of: SO_0000673
so part of: THIMO_RS19425
location: complement(8827..9915)
location: region:8827-9915:-1
so has part: feature:8827-9915:-1:exon

WP_015282491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8827-9915:-1:exon

THIMO_RS19430
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
gene: sbnA
locus tag: THIMO_RS19430
old locus tag: Thimo_3713
so part of: sequence
location: complement(9936..10868)
location: region:9936-10868:-1
so has part: feature:9936-10868:-1:exon
subclass of: SO_0000010

position:9936:-1
position: 9936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10868:-1
position: 10868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9936-10868:-1:exon

THIMO_RS19430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
gene: sbnA
locus tag: THIMO_RS19430
old locus tag: Thimo_3713
inference: COORDINATES: protein motif:HMM:TIGR03945.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2,3-diaminopropionate biosynthesis protein SbnA
translation: MVGDTPLLKLNGTRETSHFSMYAKLESCNPTGSAKDRPALGMVFDAIRSKAISKHTIIVESTSGNMGIALAHVCARFDLRFHAVVDWRTPDIALELLEAYGAEIDVVQRYECRENDHVRARIRRVQELLRSEPCAYWPNQYGNPWNPKSHYIGTMPEITRSLGAAPDYLFVPVSTCGTIMGCATWLRDHGCHTRVIAVDVIGSGIFAPSVGTRSIPGMGASGPPELLNSAFVDDFVRVTDNECVISCRELLDNEGLLMGGSSGAVMAAIHKHRAKIASGSRCVLIFPDAGDRYLKTIFDDEWAAGFLRRP
SIO_010081: THIMO_RS19430
subclass of: SO_0000673
so part of: THIMO_RS19430
location: complement(9936..10868)
location: region:9936-10868:-1
so has part: feature:9936-10868:-1:exon

WP_157633892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9936-10868:-1:exon

THIMO_RS17635
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17635
old locus tag: Thimo_3714
so part of: sequence
location: complement(10925..12172)
location: region:10925-12172:-1
so has part: feature:10925-12172:-1:exon
subclass of: SO_0000010

position:10925:-1
position: 10925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12172:-1
position: 12172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10925-12172:-1:exon

THIMO_RS17635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17635
old locus tag: Thimo_3714
EC number: 2.6.1.76
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015802946.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diaminobutyrate--2-oxoglutarate transaminase
translation: MLKAPPSDTSSGKESNVSYYSKLYPAVFASAQDCFLYDSGGHRYIDFFCAAGSLNYGHNPPRAREALLNYLDAKGVIASLDMLTEARTTFVSRFHEAILAPRNFSYRIHVTAPTGADAVEAALKLARKVTGRRTVAYMEGSFHGVTLGALSVTDYPHVRGAAGIPFEHTLRLPFDNPTRDADDNLSIISALLGLSSTELPAALIVETVQAEGGLRAARPEWLIGLQKLLRERGILLIVDDIQVGCGRTGTFFSFDGLPLAPDIVCLSKSLSGIGIPLSAVLLRPELDVWEPGEHTGTFRGNNLGFVAAAAMLDLWLDESFVAHIDDLDTLFSSLSHSLLASHPDKIVGIRGRGLALGLEFQEPTCANAVMRDAFKFGLMIETSGFRGEVLKIYPPLTASEEVMREAFSVLSKILH
SIO_010081: THIMO_RS17635
subclass of: SO_0000673
so part of: THIMO_RS17635
location: complement(10925..12172)
location: region:10925-12172:-1
so has part: feature:10925-12172:-1:exon

WP_015282493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10925-12172:-1:exon

THIMO_RS19435
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS19435
old locus tag: Thimo_3715
pseudo: true
so part of: sequence
location: complement(<12511..>12750)
location: region:12511-12750:-1
so has part: feature:12511-12750:-1:exon
subclass of: SO_0000010

position:12511:-1
position: 12511
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:12750:-1
position: 12750
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12511-12750:-1:exon

THIMO_RS19435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS19435
old locus tag: Thimo_3715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006122509.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
SIO_010081: THIMO_RS19435
subclass of: SO_0000673
so part of: THIMO_RS19435
location: complement(<12511..>12750)
location: region:12511-12750:-1
so has part: feature:12511-12750:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12511-12750:-1:exon

THIMO_RS17645
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17645
old locus tag: Thimo_3716
so part of: sequence
location: 12844..13146
location: region:12844-13146:1
so has part: feature:12844-13146:1:exon
subclass of: SO_0000010

position:12844:1
position: 12844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13146:1
position: 13146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12844-13146:1:exon

THIMO_RS17645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17645
old locus tag: Thimo_3716
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015281876.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATTTRVRRTHADWQAVISRAERSSLSTAAFCAGEGISTASFYLWRKRWRASNPPQGDVGEEAPEFLDLGLLSRPANTEGASWDLELDLGDGVVLRLRRA
SIO_010081: THIMO_RS17645
subclass of: SO_0000673
so part of: THIMO_RS17645
location: 12844..13146
location: region:12844-13146:1
so has part: feature:12844-13146:1:exon

WP_015279038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12844-13146:1:exon

THIMO_RS17650
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
gene: tnpB
locus tag: THIMO_RS17650
old locus tag: Thimo_3717
so part of: sequence
location: 13146..13508
location: region:13146-13508:1
so has part: feature:13146-13508:1:exon
subclass of: SO_0000010

position:13508:1
position: 13508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13146-13508:1:exon

THIMO_RS17650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
gene: tnpB
locus tag: THIMO_RS17650
old locus tag: Thimo_3717
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006119137.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MFFPEGRVRVFLHGRPVDMRKSFTGLIALTQQALAQDPLSGHLFVFVNRRGDYLKVLYWDRSGFCLWCKRLERGRFISDWRKRQDQELDVTGLRLLLEGIEPARRRLRYAREGEKRTAIW
SIO_010081: THIMO_RS17650
subclass of: SO_0000673
so part of: THIMO_RS17650
location: 13146..13508
location: region:13146-13508:1
so has part: feature:13146-13508:1:exon

WP_015279037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13146-13508:1:exon

THIMO_RS17655
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17655
old locus tag: Thimo_3718
pseudo: true
so part of: sequence
location: <13611..15107
location: region:13611-15107:1
so has part: feature:13611-15107:1:exon
subclass of: SO_0000010

position:13611:1
position: 13611
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:15107:1
position: 15107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13611-15107:1:exon

THIMO_RS17655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17655
old locus tag: Thimo_3718
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558016.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family transposase
SIO_010081: THIMO_RS17655
subclass of: SO_0000673
so part of: THIMO_RS17655
location: <13611..15107
location: region:13611-15107:1
so has part: feature:13611-15107:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13611-15107:1:exon

THIMO_RS17665
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17665
old locus tag: Thimo_3720
pseudo: true
so part of: sequence
location: complement(<15132..20630)
location: region:15132-20630:-1
so has part: feature:15132-20630:-1:exon
subclass of: SO_0000010

position:15132:-1
position: 15132
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:20630:-1
position: 20630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15132-20630:-1:exon

THIMO_RS17665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17665
old locus tag: Thimo_3720
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017842785.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: strawberry notch family protein
SIO_010081: THIMO_RS17665
subclass of: SO_0000673
so part of: THIMO_RS17665
location: complement(<15132..20630)
location: region:15132-20630:-1
so has part: feature:15132-20630:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15132-20630:-1:exon

THIMO_RS17670
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17670
old locus tag: Thimo_3721
pseudo: true
so part of: sequence
location: complement(<20833..21720)
location: region:20833-21720:-1
so has part: feature:20833-21720:-1:exon
subclass of: SO_0000010

position:20833:-1
position: 20833
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:21720:-1
position: 21720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20833-21720:-1:exon

THIMO_RS17670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17670
old locus tag: Thimo_3721
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000796541.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
SIO_010081: THIMO_RS17670
subclass of: SO_0000673
so part of: THIMO_RS17670
location: complement(<20833..21720)
location: region:20833-21720:-1
so has part: feature:20833-21720:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20833-21720:-1:exon

THIMO_RS17675
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17675
old locus tag: Thimo_3722
so part of: sequence
location: complement(21720..21884)
location: region:21720-21884:-1
so has part: feature:21720-21884:-1:exon
subclass of: SO_0000010

position:21884:-1
position: 21884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21720-21884:-1:exon

THIMO_RS17675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17675
old locus tag: Thimo_3722
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTQPTDPDILKLNEPGVVIEVDRRTAEDLGAFEEDALDEAEALASAEIDPREVH
SIO_010081: THIMO_RS17675
subclass of: SO_0000673
so part of: THIMO_RS17675
location: complement(21720..21884)
location: region:21720-21884:-1
so has part: feature:21720-21884:-1:exon

WP_015282496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21720-21884:-1:exon

THIMO_RS18590
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS18590
old locus tag: Thimo_3723
so part of: sequence
location: complement(21928..22932)
location: region:21928-22932:-1
so has part: feature:21928-22932:-1:exon
subclass of: SO_0000010

position:21928:-1
position: 21928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22932:-1
position: 22932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21928-22932:-1:exon

THIMO_RS18590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS18590
old locus tag: Thimo_3723
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSATADSLFDDYWFVLARTGRARGPGADGPERLASSAMRQTLLNAVRRKPQVMVKITSFARSKEGLAAHLDYISRNGQNEVFDPAGDAFSGIGGHMGLSARDAIQHYGRELATGPIEEASTGKKKTGRPRKRVSMNLMLSMPAGTETGAFELAVRDFLNEQFQAHDRLFTFHDDRDHYHAHVVVGLQGADGRWLNPRKNDLLAWRETFAASLERQGIAAEATPAYSRGKGKDGYRRDLEELGRRGTRERPSPSPSYEAETEERAIRRRAEAWTRIADHYAAAGDQEAADAIRDYVADHYDYRPEPGAAQDQAQAPTPEPPTRRRKRPRDQDRER
SIO_010081: THIMO_RS18590
subclass of: SO_0000673
so part of: THIMO_RS18590
location: complement(21928..22932)
location: region:21928-22932:-1
so has part: feature:21928-22932:-1:exon

WP_015282497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21928-22932:-1:exon

THIMO_RS17685
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
gene: mobC
locus tag: THIMO_RS17685
old locus tag: Thimo_3724
so part of: sequence
location: complement(22985..23317)
location: region:22985-23317:-1
so has part: feature:22985-23317:-1:exon
subclass of: SO_0000010

position:22985:-1
position: 22985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23317:-1
position: 23317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22985-23317:-1:exon

THIMO_RS17685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
gene: mobC
locus tag: THIMO_RS17685
old locus tag: Thimo_3724
inference: COORDINATES: protein motif:HMM:NF017524.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MASPRICLRIPERLCRLIDARRGGTTLSAWLRDAASHRVTSEVGLGHELIASLAEHNRQLRGLGINLNQLAHAANEGRPVAVNQKMLADIRASLRETRTLLAEIKERLPE
SIO_010081: THIMO_RS17685
subclass of: SO_0000673
so part of: THIMO_RS17685
location: complement(22985..23317)
location: region:22985-23317:-1
so has part: feature:22985-23317:-1:exon

WP_015282498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22985-23317:-1:exon

THIMO_RS18595
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS18595
old locus tag: Thimo_3725
so part of: sequence
location: 23696..24223
location: region:23696-24223:1
so has part: feature:23696-24223:1:exon
subclass of: SO_0000010

position:23696:1
position: 23696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24223:1
position: 24223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23696-24223:1:exon

THIMO_RS18595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS18595
old locus tag: Thimo_3725
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADNKTVSPEETSPVEAAEAALDRLAAKLAPPSIGAQIRRLLPKIENAIEAGATHEQILETLRESGIEMTIATFRSALYRARKKRDREQTGQQRGSRERSSGGGSSGDSSPSDGEQRLKGASKAEPGARSGADARQETRDPLAVPKRPKSFDWDPTARPEVTFINKDDDKVDTDP
SIO_010081: THIMO_RS18595
subclass of: SO_0000673
so part of: THIMO_RS18595
location: 23696..24223
location: region:23696-24223:1
so has part: feature:23696-24223:1:exon

WP_216593941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23696-24223:1:exon

THIMO_RS17695
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17695
old locus tag: Thimo_3726
so part of: sequence
location: 24310..25065
location: region:24310-25065:1
so has part: feature:24310-25065:1:exon
subclass of: SO_0000010

position:24310:1
position: 24310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25065:1
position: 25065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24310-25065:1:exon

THIMO_RS17695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17695
old locus tag: Thimo_3726
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007041943.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-loop NTPase
translation: MATLYVTLQGKGGVGKSYLTAAFAQWLVEQGRSVACIDTDTLNPTLLQYAPLKATHLKLSQNHVIDPRALDTLVGIVAEAPDDGQVVVDVGSNGFETLMAYEVENGVFALLQELGHRVVVQTVIAGGPDAEETVKGTMALLAATDVPVILWLNEHLGPLELYGRPIAEASFLHEAQGRILGTILLPARTKATFGKDTEEMLRQRLTFAEAIEQFDLMPRTRIKRIRDELWAQLDALPLDGAEGEVQASASA
SIO_010081: THIMO_RS17695
subclass of: SO_0000673
so part of: THIMO_RS17695
location: 24310..25065
location: region:24310-25065:1
so has part: feature:24310-25065:1:exon

WP_015282500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24310-25065:1:exon

THIMO_RS17700
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17700
old locus tag: Thimo_3727
so part of: sequence
location: 25062..25616
location: region:25062-25616:1
so has part: feature:25062-25616:1:exon
subclass of: SO_0000010

position:25062:1
position: 25062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25616:1
position: 25616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25062-25616:1:exon

THIMO_RS17700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17700
old locus tag: Thimo_3727
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: conjugal transfer protein TraM
translation: MNEQDDLIGDLIAEVARSHGVAISRDDPIVAVVLLNQIVLRRYLEETVAPAADAIRDATTDAVRQIEQFAEAQATWLEQVSLKDRSSLLEAQTNLQQDWVSRMEALLAEQESALFRVVSRSATLLQRRSASVPAKPATHPDTYRPLRSNRTGFWTGFVVGLLVTCLAAVGWLGIQRTASFAFGG
SIO_010081: THIMO_RS17700
subclass of: SO_0000673
so part of: THIMO_RS17700
location: 25062..25616
location: region:25062-25616:1
so has part: feature:25062-25616:1:exon

WP_015282501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25062-25616:1:exon

THIMO_RS17705
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17705
old locus tag: Thimo_3728
so part of: sequence
location: 25720..25980
location: region:25720-25980:1
so has part: feature:25720-25980:1:exon
subclass of: SO_0000010

position:25720:1
position: 25720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25980:1
position: 25980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25720-25980:1:exon

THIMO_RS17705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17705
old locus tag: Thimo_3728
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013964480.1
GO process: GO:0051983 - regulation of chromosome segregation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system ParD family antitoxin
translation: MQTMNISLPDPLKEFVDGQIAEGRYSSASEYVRELIRADEQRKAQQALESALLEGLSSTETVLSDDDWKAIRAEAMSRLAARRQAS
SIO_010081: THIMO_RS17705
subclass of: SO_0000673
so part of: THIMO_RS17705
location: 25720..25980
location: region:25720-25980:1
so has part: feature:25720-25980:1:exon

WP_015282502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25720-25980:1:exon

THIMO_RS17710
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17710
old locus tag: Thimo_3729
so part of: sequence
location: 25980..26303
location: region:25980-26303:1
so has part: feature:25980-26303:1:exon
subclass of: SO_0000010

position:26303:1
position: 26303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25980-26303:1:exon

THIMO_RS17710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17710
old locus tag: Thimo_3729
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018440969.1
GO function: GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO process: GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MARVYQRATARRDLIQHFVHLAETAGEETADRFLTSARSTFEDLAEQPRIGAPLHLSNPALEHMRKWRVSGFENYLVFYLPRPDGVSVIRVLHAASDWWGLFGIETD
SIO_010081: THIMO_RS17710
subclass of: SO_0000673
so part of: THIMO_RS17710
location: 25980..26303
location: region:25980-26303:1
so has part: feature:25980-26303:1:exon

WP_015282503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25980-26303:1:exon

THIMO_RS17715
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17715
old locus tag: Thimo_3730
pseudo: true
so part of: sequence
location: complement(26531..>28027)
location: region:26531-28027:-1
so has part: feature:26531-28027:-1:exon
subclass of: SO_0000010

position:26531:-1
position: 26531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28027:-1
position: 28027
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26531-28027:-1:exon

THIMO_RS17715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17715
old locus tag: Thimo_3730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558016.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family transposase
SIO_010081: THIMO_RS17715
subclass of: SO_0000673
so part of: THIMO_RS17715
location: complement(26531..>28027)
location: region:26531-28027:-1
so has part: feature:26531-28027:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26531-28027:-1:exon

THIMO_RS17720
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
gene: tnpB
locus tag: THIMO_RS17720
old locus tag: Thimo_3731
so part of: sequence
location: complement(28130..28492)
location: region:28130-28492:-1
so has part: feature:28130-28492:-1:exon
subclass of: SO_0000010

position:28130:-1
position: 28130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28492:-1
position: 28492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28130-28492:-1:exon

THIMO_RS17720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
gene: tnpB
locus tag: THIMO_RS17720
old locus tag: Thimo_3731
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006119137.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MFFPEGRVRVFLHGRPVDMRKSFTGLIALTQQALAQDPLSGHLFVFVNRRGDYLKVLYWDRSGFCLWCKRLERGRFISDWRKRQDQELDVTGLRLLLEGIEPARRRLRYAREGEKRTAIW
SIO_010081: THIMO_RS17720
subclass of: SO_0000673
so part of: THIMO_RS17720
location: complement(28130..28492)
location: region:28130-28492:-1
so has part: feature:28130-28492:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28130-28492:-1:exon

THIMO_RS17725
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17725
old locus tag: Thimo_3732
so part of: sequence
location: complement(28492..28794)
location: region:28492-28794:-1
so has part: feature:28492-28794:-1:exon
subclass of: SO_0000010

position:28794:-1
position: 28794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28492-28794:-1:exon

THIMO_RS17725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17725
old locus tag: Thimo_3732
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015281876.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATTTRVRRTHADWQAVISRAERSSLSTAAFCAGEGISTASFYLWRKRWRASNPPQGDVGEEAPEFLDLGLLSRPANTEGASWDLELDLGDGVVLRLRRA
SIO_010081: THIMO_RS17725
subclass of: SO_0000673
so part of: THIMO_RS17725
location: complement(28492..28794)
location: region:28492-28794:-1
so has part: feature:28492-28794:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28492-28794:-1:exon

THIMO_RS17730
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17730
old locus tag: Thimo_3733
so part of: sequence
location: complement(28882..29382)
location: region:28882-29382:-1
so has part: feature:28882-29382:-1:exon
subclass of: SO_0000010

position:28882:-1
position: 28882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29382:-1
position: 29382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28882-29382:-1:exon

THIMO_RS17730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17730
old locus tag: Thimo_3733
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016487841.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: JAB domain-containing protein
translation: MATRIHPGTALQVQDSNGRYRSASDEDVLNAARSAINRRFRRGRALTSPVDSQEFLAVRLAHLEHEVFAVLWLDNRHRILAFEELFRGTIDGSSVHPREVVKFALCHNAAACIMAHNHSSGVSEPSRADLNTTQRLKDALVLIDVRVLDHIVVGETRTSLAARGLV
SIO_010081: THIMO_RS17730
subclass of: SO_0000673
so part of: THIMO_RS17730
location: complement(28882..29382)
location: region:28882-29382:-1
so has part: feature:28882-29382:-1:exon

WP_015282504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28882-29382:-1:exon

THIMO_RS19445
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS19445
old locus tag: Thimo_3734
so part of: sequence
location: 29944..31734
location: region:29944-31734:1
so has part: feature:29944-31734:1:exon
subclass of: SO_0000010

position:29944:1
position: 29944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31734:1
position: 31734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29944-31734:1:exon

THIMO_RS19445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS19445
old locus tag: Thimo_3734
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: P-loop NTPase fold protein
translation: MPKQLSAAIITNVVKDYVNAEDTAHAIMLDGEWGCGKTYLWKRTIAPAIGEQRCLYISLYGLASFEDIDNALFRELTFLGSTDSGGTLSDMLNKSSAGIGDVRLGGIGSLVAYALQQWKKRTIKHSDKGLICFDDLERWSGPPHTVLSYINRFCEREGQKVLVIGNYKAFMSQVGDAVGTSGFRKTIRFKYKLQIPAEHVLEVAASSCSWFPPDASTYLSEILEAHKLRLTSFIKRFRIHNIRTVATTLHYFLVTQQANKALFRNAKLQAVAFLESLLATMVLLNTEEPDHGLRDILEDPDCDDHTPLLKGFASLQNALGKTEFEQLTRCAIYSQSRVGITSLVSRGTYIAEEFQTTLQQWEALDAYYSYLDETHFYSLDDAQAHDLTKKVTEGVLQRREVTDASLLLSLLDRLLQDIREKAISTDESELLESFRRLFEELVKNGDLEPGDTSVAVSIVNIPSQFAEAIQSLLDQHKSANRQLGARRFWDSLASQSEPEDVAALVALNREEPLFIAPTQVILSRVEALSNPSLAALLSALADRLDAKSAASAREAESEAASQVAAALMEKYGSLVGVREANLRRLSTLLATDGATR
SIO_010081: THIMO_RS19445
subclass of: SO_0000673
so part of: THIMO_RS19445
location: 29944..31734
location: region:29944-31734:1
so has part: feature:29944-31734:1:exon

WP_015282505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29944-31734:1:exon

THIMO_RS19450
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS19450
old locus tag: Thimo_3735
so part of: sequence
location: complement(31724..33106)
location: region:31724-33106:-1
so has part: feature:31724-33106:-1:exon
subclass of: SO_0000010

position:31724:-1
position: 31724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33106:-1
position: 33106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31724-33106:-1:exon

THIMO_RS19450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS19450
old locus tag: Thimo_3735
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MITRVGRVRNARSCASPRQECIDFEPGVNLLVGPPNSGKTKWFETIDYLLGYKQKPGDLFGGAMVADYDSCFLHLLIGDRCYLVSRYISESFSHRRIYLSPVDLSEPATEFALDDWVERIPKLLGLPELVAPSGNPVARPWKRLGFRSLLRHIYRRQRSWGGLVDKQPESEQRLCILYFVGIARRIYTHDAKELAALERERELYGRSPWEKVIRDLWTHLDTEETFDVALDSIKATGEKRRQIQEQFQQLRTNNPSDLDAAFELGRSLGRVEEKENLLNLLCESEQARSLRAIQREIDARKTIRQELPGTAQINEALDVIAIGINEYLSQITDEKSSAWRHGDVSVRVSTSAVHFYVANRPWETVLGGSDSLIFLVAYQYALLRLGQYDHLHYPGFQLIDLPPDFLGEDIRDKENYIVRPFLELLRTGCRKDWQLIISGASFDGLECPRHVLNTRFTITE
SIO_010081: THIMO_RS19450
subclass of: SO_0000673
so part of: THIMO_RS19450
location: complement(31724..33106)
location: region:31724-33106:-1
so has part: feature:31724-33106:-1:exon

WP_157633894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31724-33106:-1:exon

THIMO_RS20180
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS20180
so part of: sequence
location: complement(33144..33641)
location: region:33144-33641:-1
so has part: feature:33144-33641:-1:exon
subclass of: SO_0000010

position:33144:-1
position: 33144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33641:-1
position: 33641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33144-33641:-1:exon

THIMO_RS20180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS20180
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDQAQHPIHHLKSKGFARFWQDLKNVEGTGYEHSICTDVQSMLASVSQVATELAGRAGSHWLDEVSADLPSYVQVYVQWNDAGRNASDQAEKIRRDRLEQILDTNRKWIKEWKRLHRAGNAPASATEREFADRVYGHFADLAEKHPSTFRSLKSAVRSFRASSGH
SIO_010081: THIMO_RS20180
subclass of: SO_0000673
so part of: THIMO_RS20180
location: complement(33144..33641)
location: region:33144-33641:-1
so has part: feature:33144-33641:-1:exon

WP_157633895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33144-33641:-1:exon

THIMO_RS17745
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17745
old locus tag: Thimo_3736
so part of: sequence
location: complement(33971..34960)
location: region:33971-34960:-1
so has part: feature:33971-34960:-1:exon
subclass of: SO_0000010

position:33971:-1
position: 33971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34960:-1
position: 34960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33971-34960:-1:exon

THIMO_RS17745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17745
old locus tag: Thimo_3736
inference: COORDINATES: protein motif:HMM:NF024554.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3991 and TOPRIM domain-containing protein
translation: MTFSHAKKSPRDYGAGYRDELERFKTAINLTEYAASQGYQLDKRASSRNSVVMRHSAGDKVVIARGEDQHWIYFSVRNDSDNGSIIDFIQYRRRCSLADVRRELRPWVGGAVPRPALELYVPEVVPVSRDRAGVIRALAAMKPLVTHRYLEEKRAIPRDLLAHPRFAGKVLVDACSNVIFPHVDRDGPCGYEIKNHRFTGFAPGGEKGLWISGVQRTDTALVLAESGIDALSYAALNPDENARYASFGGTMNPSQPALIRAAIERLAPGVAVQIATDNDEDGAGFAVIIGGLIAETGRSDLAVERAVPIDAKDWNDALLRASGVALATG
SIO_010081: THIMO_RS17745
subclass of: SO_0000673
so part of: THIMO_RS17745
location: complement(33971..34960)
location: region:33971-34960:-1
so has part: feature:33971-34960:-1:exon

WP_015282507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33971-34960:-1:exon

THIMO_RS20295
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS20295
old locus tag: Thimo_3737
so part of: sequence
location: complement(34957..36072)
location: region:34957-36072:-1
so has part: feature:34957-36072:-1:exon
subclass of: SO_0000010

position:34957:-1
position: 34957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36072:-1
position: 36072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34957-36072:-1:exon

THIMO_RS20295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS20295
old locus tag: Thimo_3737
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHLESSAYGRAWECDRRVGVGGGCEGAIQLREDDELTELQIAEAIARRTLGGDSSAHRQGQPEYHHVIGPLEEIARSGYLSGPQRRVLEEARVIVKRLASAAALAKDQARRQEKAREAAVEGRCRQAMGLLGPSLAPDTTRLEASVVDLLALARFGGDACSTGPDILANDSIEALENLLSSRAAGEQRTAADVIFADLLSAHQGLREGISRDWSARSEPIEDLHARFIATLPRLREAILSSPPPYLQVVRRLLAEIAPDNVVPLAPRLSSMTPIPNQTRRRVISAFRFHSQRSPAESAALLTSFAVKRGLSDPRRPPPGSALEQWATAAKAPLWAVQAAASWLDAHATVTDPEEQAAVAAVLEQTGGGGEG
SIO_010081: THIMO_RS20295
subclass of: SO_0000673
so part of: THIMO_RS20295
location: complement(34957..36072)
location: region:34957-36072:-1
so has part: feature:34957-36072:-1:exon

WP_172637486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34957-36072:-1:exon

THIMO_RS18600
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS18600
old locus tag: Thimo_3738
so part of: sequence
location: complement(36300..37307)
location: region:36300-37307:-1
so has part: feature:36300-37307:-1:exon
subclass of: SO_0000010

position:36300:-1
position: 36300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37307:-1
position: 37307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36300-37307:-1:exon

THIMO_RS18600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS18600
old locus tag: Thimo_3738
inference: COORDINATES: protein motif:HMM:TIGR00180.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MDTPAEAGAQEIALSLIDPDPNQPRTSFDELRLENLAASVKAQGVIEPLIVSHHPETAGRYMLIAGERRWRAAGKAGLTLVPVVIRELTGDQRLAVQLVENIDREELSVMEEALAVTRLLDFGRKPKEVADMLGKTAAWVSLRKKIAKHQAILEYFVVQGQTGDAETLAMLVDLEKIDRKAFEDMLQQDQVGRAMVREALDLAKARKEEAVNPKKSPIPKVTDPSESAHGGEEAAAERTGTSARSRSEGEASDPESPAAGTEEETPARSKASRTKRKGDSGSEGGSAAYDEIARALQTTLGLPVTIDAPRDGKSGELRIGFANLLELEGLQQNLT
SIO_010081: THIMO_RS18600
subclass of: SO_0000673
so part of: THIMO_RS18600
location: complement(36300..37307)
location: region:36300-37307:-1
so has part: feature:36300-37307:-1:exon

WP_051022057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36300-37307:-1:exon

THIMO_RS17760
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17760
old locus tag: Thimo_3739
so part of: sequence
location: complement(37340..38098)
location: region:37340-38098:-1
so has part: feature:37340-38098:-1:exon
subclass of: SO_0000010

position:37340:-1
position: 37340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38098:-1
position: 38098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37340-38098:-1:exon

THIMO_RS17760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17760
old locus tag: Thimo_3739
inference: COORDINATES: protein motif:HMM:NF013793.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MQIIAIANQKGGVGKSTLAVHLAWLALEQERPVLLVDMDGQANSSRTFTDEFTGVLASKLFTEAPGTLKGSPQAISDQFSLIPADMAINDVEGLELETIERPAAHIRALPLTAETLVIIDTPPTLGRRLLSALIAADAVVSPVALNGYSIQGITDLQKTIQTVMRRFNPRLKNLGLLANMVNSRSATHAQMLGELRQVLGDKLLSVTLGHRVAISDAIDRGRPVWQGTRGESAQRAAQEMRGVCTAILEKLS
SIO_010081: THIMO_RS17760
subclass of: SO_0000673
so part of: THIMO_RS17760
location: complement(37340..38098)
location: region:37340-38098:-1
so has part: feature:37340-38098:-1:exon

WP_015282510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37340-38098:-1:exon

THIMO_RS17765
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17765
old locus tag: Thimo_3740
so part of: sequence
location: complement(38199..38441)
location: region:38199-38441:-1
so has part: feature:38199-38441:-1:exon
subclass of: SO_0000010

position:38199:-1
position: 38199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38441:-1
position: 38441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38199-38441:-1:exon

THIMO_RS17765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17765
old locus tag: Thimo_3740
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPEKVPMARMQLLLPPDLKAEIEQFAEEQGLSANEAIRLLSRRGLSASGKPAPVEALLEELGYRVRDLEQRVEKAEGSSA
SIO_010081: THIMO_RS17765
subclass of: SO_0000673
so part of: THIMO_RS17765
location: complement(38199..38441)
location: region:38199-38441:-1
so has part: feature:38199-38441:-1:exon

WP_015282511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38199-38441:-1:exon

THIMO_RS17770
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17770
old locus tag: Thimo_3741
so part of: sequence
location: complement(38544..38939)
location: region:38544-38939:-1
so has part: feature:38544-38939:-1:exon
subclass of: SO_0000010

position:38544:-1
position: 38544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38939:-1
position: 38939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38544-38939:-1:exon

THIMO_RS17770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17770
old locus tag: Thimo_3741
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017113439.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFEDADLIHRYTRADALEDGTLVDVTETAKGVGFRIPVALTRTAWSDCVAWTEEDNERVVYQDESGRLWDLLWMAINAARRNTEASRLEFKVLRVPRDSRTGQPVSVTLVLDIGPGDQGEAVITIGFAEDF
SIO_010081: THIMO_RS17770
subclass of: SO_0000673
so part of: THIMO_RS17770
location: complement(38544..38939)
location: region:38544-38939:-1
so has part: feature:38544-38939:-1:exon

WP_015282512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38544-38939:-1:exon

THIMO_RS20185
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS20185
old locus tag: Thimo_3742
so part of: sequence
location: complement(39028..39192)
location: region:39028-39192:-1
so has part: feature:39028-39192:-1:exon
subclass of: SO_0000010

position:39028:-1
position: 39028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39192:-1
position: 39192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39028-39192:-1:exon

THIMO_RS20185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS20185
old locus tag: Thimo_3742
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEQYTDLDGNLITVPELTWLEDGRDNDGNHCARYAIGNEESVWLDWHGQEVERE
SIO_010081: THIMO_RS20185
subclass of: SO_0000673
so part of: THIMO_RS20185
location: complement(39028..39192)
location: region:39028-39192:-1
so has part: feature:39028-39192:-1:exon

WP_015282513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39028-39192:-1:exon

THIMO_RS17775
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
gene: radC
locus tag: THIMO_RS17775
old locus tag: Thimo_3743
so part of: sequence
location: complement(39315..39833)
location: region:39315-39833:-1
so has part: feature:39315-39833:-1:exon
subclass of: SO_0000010

position:39315:-1
position: 39315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39833:-1
position: 39833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39315-39833:-1:exon

THIMO_RS17775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
gene: radC
locus tag: THIMO_RS17775
old locus tag: Thimo_3743
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005965336.1
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RadC
translation: MTQQILSFPANASTNRFADLRPGDLSADEKASLVELALTILARKHRRGSALTSPEATRSYLRLEIGERHHELFGCLFLDNRHRIIAKEELFYGTIDGASVHPRVVVARALELNAAAVVFFHNHPSGVAEPSQSDLRITTRLKDALALVDVRVLDHLVVSVEDSVSLAERGLI
SIO_010081: THIMO_RS17775
subclass of: SO_0000673
so part of: THIMO_RS17775
location: complement(39315..39833)
location: region:39315-39833:-1
so has part: feature:39315-39833:-1:exon

WP_015282514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39315-39833:-1:exon

THIMO_RS17780
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17780
old locus tag: Thimo_3744
so part of: sequence
location: 40440..41600
location: region:40440-41600:1
so has part: feature:40440-41600:1:exon
subclass of: SO_0000010

position:40440:1
position: 40440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41600:1
position: 41600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40440-41600:1:exon

THIMO_RS17780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17780
old locus tag: Thimo_3744
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007290786.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MIPRTIGAKVEAALARQAAVGLIGPRQVGKTTLAHEIAKTQPSIYLDLEAAADRDKLSDPVLFLDRHVDKLVILDEIHRVPALFEALRGIIDAGRRAGHRTGRFLILGSATIDLLRQSGESLAGRITYVDLAPLTADEVDRSDLEQLWLRGGFPDSFLAATDEDSLELRESFVRTYLERDVPMFGPRIPAETLRRLWTMLAHNQGTLLNASRLASGLSVSAPTVTSYIDLLVDLLLVRRLPPFHANVGKRLVKSPKTYVRDSGLTHALLNIETFEDLLGHPVSGPSWEGFVIENLITAAPSRTQASFYRTAAGAEIDLLLELGDKRGTWAVEIKRSLAAKPQRGFYNAVEDIQPTKAFVVHAGDDRYPISESVEAVGLREMIGLLS
SIO_010081: THIMO_RS17780
subclass of: SO_0000673
so part of: THIMO_RS17780
location: 40440..41600
location: region:40440-41600:1
so has part: feature:40440-41600:1:exon

WP_015282515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40440-41600:1:exon

THIMO_RS17785
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17785
old locus tag: Thimo_3745
so part of: sequence
location: complement(41838..42149)
location: region:41838-42149:-1
so has part: feature:41838-42149:-1:exon
subclass of: SO_0000010

position:41838:-1
position: 41838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42149:-1
position: 42149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41838-42149:-1:exon

THIMO_RS17785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17785
old locus tag: Thimo_3745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012972391.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNPYLHPVWSEWIRGAHHGGAQALQNLALHLYNSREWPVNLGYICSMSDDHWEAALAMILDYRENGENNREFMAMCEAIAEERSERTAVEARDDDSGQDMAGS
SIO_010081: THIMO_RS17785
subclass of: SO_0000673
so part of: THIMO_RS17785
location: complement(41838..42149)
location: region:41838-42149:-1
so has part: feature:41838-42149:-1:exon

WP_015282516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41838-42149:-1:exon

THIMO_RS17790
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17790
old locus tag: Thimo_3746
so part of: sequence
location: complement(42206..43876)
location: region:42206-43876:-1
so has part: feature:42206-43876:-1:exon
subclass of: SO_0000010

position:42206:-1
position: 42206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43876:-1
position: 43876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42206-43876:-1:exon

THIMO_RS17790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17790
old locus tag: Thimo_3746
inference: COORDINATES: protein motif:HMM:NF037421.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPD7 domain-containing protein
translation: MADTQSIVLGSDSGTFWQEGDTWTDDPSEAKSFDNPRQAWHQAVRLQSTQADYLEDSPVELHLRDSDEPRLTRRVTSLAAQNNRPALRRQWRTNFGEPLPPDLPSPLQSDEVYRLEDFLSDVDWDALRSRYGSPDKMYAALDSSFRAALKQAAESDREPVSRMLHQLVPRDVSSAMQSDWRRAPFTKQVPVPENSREASGVEHNEISRDRLREHTPVDAPSPPPIPASRTGAAADSRTKSPADQLPDFVRRHFVRSGAEFFYRQTPDKLAFETRGETFHAHDSSVSVATAMVEMAEARGWSALKVKGSKDFRRLVWAAAAKRGLSVNGYAPSAGERAMLEQDQEASRPPQRDALGSRADGRQRERPADPLAGTFVDYGSAPFRNQQGNSPSYFVSLRSESGSVTTHWGLDLERAMDESGADVGDQVRLARLGKQRVQVQEPVRDQRGNVVDHVTRETERNSWSVTVLSRSDRSDDAQRGQRPEADADPIAAKVVELFTAERLGILPPEEQARFRELYAQARSRLDSREISTHDLADQPGRNLVSRDRHRERAAQGR
SIO_010081: THIMO_RS17790
subclass of: SO_0000673
so part of: THIMO_RS17790
location: complement(42206..43876)
location: region:42206-43876:-1
so has part: feature:42206-43876:-1:exon

WP_015282517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42206-43876:-1:exon

THIMO_RS17795
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17795
old locus tag: Thimo_3748
so part of: sequence
location: 44783..45502
location: region:44783-45502:1
so has part: feature:44783-45502:1:exon
subclass of: SO_0000010

position:44783:1
position: 44783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45502:1
position: 45502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44783-45502:1:exon

THIMO_RS17795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17795
old locus tag: Thimo_3748
inference: COORDINATES: protein motif:HMM:NF013235.2
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MDQQRSITVRADGNSIVTKANALIEASYNLTLNEQRIILACAAKLDSRKPMPREAVFVLDADEFVELFGSDPRNAYAEMEEAASKLYERDIRRIEGKTRKRLRWVYMAEYQKGAGRVKLGFSPEIAPYLTMLHKRFTSYRLEEVASLRSTYAIRLFEMLAQYSDTGVFLITVADFKQRLGIEDKYDRFSNLKARVIQPAIKDLQTKTSLDITWQGVKKGKSVERLEFRFEEKRQMQLDI
SIO_010081: THIMO_RS17795
subclass of: SO_0000673
so part of: THIMO_RS17795
location: 44783..45502
location: region:44783-45502:1
so has part: feature:44783-45502:1:exon

WP_015282519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44783-45502:1:exon

THIMO_RS17800
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17800
old locus tag: Thimo_3749
so part of: sequence
location: 45503..46522
location: region:45503-46522:1
so has part: feature:45503-46522:1:exon
subclass of: SO_0000010

position:45503:1
position: 45503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46522:1
position: 46522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45503-46522:1:exon

THIMO_RS17800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17800
old locus tag: Thimo_3749
inference: COORDINATES: protein motif:HMM:NF024039.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MGRAREAMSSTILATAGRIVHRLIERVGLEADAMFLSAGLDPQKLNDPQARYPLERSRQLLHQVNEQIQDPCWGLAAGELWRPTDFHALGYAYLASGTLESALKRMERYFRIVIQGWSVQSSIRDDDFCMTHLIPTDMADLPANHDARLSISLRMCREIYGQEFRFREVRLAHPWQACGYEDFFGCPVRYDADYTGFTIPIDVVRRPLPAKNRDLARANDRILQDLDRRLLDGSMLGRVKNAILDSLPDGKPSAQGIARKLAVSPRTLQRKLQEEGTTFQAVLDGVRKELAEDYLRSGEYDLQTITYLTGFANPPAFSRAFKKWTGRSPSEERESQNYS
SIO_010081: THIMO_RS17800
subclass of: SO_0000673
so part of: THIMO_RS17800
location: 45503..46522
location: region:45503-46522:1
so has part: feature:45503-46522:1:exon

WP_041604717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45503-46522:1:exon

THIMO_RS18605
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS18605
old locus tag: Thimo_3750
so part of: sequence
location: 46672..47307
location: region:46672-47307:1
so has part: feature:46672-47307:1:exon
subclass of: SO_0000010

position:46672:1
position: 46672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47307:1
position: 47307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46672-47307:1:exon

THIMO_RS18605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS18605
old locus tag: Thimo_3750
inference: COORDINATES: protein motif:HMM:NF013618.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MDLITLIATCAPMVAPITMKAIVLEESRGHPYAIHDSKRRRALFPKTREQAIATARELLAAGHRIDAGLAQINSENWEWLGLSPETVFDPCINLAAGERVLVDAYARAPFTVDAAISRYNSGDAERGIRNGYVSRVKAWMPKPPPDRRYEVEDVPLNDYVPTDPVVVGVSLAQDLAADAGPTDQPALAQDPPESNAKPWRFEAVLDGFDGG
SIO_010081: THIMO_RS18605
subclass of: SO_0000673
so part of: THIMO_RS18605
location: 46672..47307
location: region:46672-47307:1
so has part: feature:46672-47307:1:exon

WP_015282521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46672-47307:1:exon

THIMO_RS17810
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17810
old locus tag: Thimo_3751
so part of: sequence
location: 47407..47754
location: region:47407-47754:1
so has part: feature:47407-47754:1:exon
subclass of: SO_0000010

position:47407:1
position: 47407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47754:1
position: 47754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47407-47754:1:exon

THIMO_RS17810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17810
old locus tag: Thimo_3751
inference: COORDINATES: protein motif:HMM:NF016820.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MTQANATDPTTRGIAAVTLLAALALAPEIASANVLDNFGNAILGILNNTFLRAVAIAAVIGAGLMALSGRIQWMAFISVMIAVVIIFGSAGIVDYIRDNSATAALDPAPIVERVA
SIO_010081: THIMO_RS17810
subclass of: SO_0000673
so part of: THIMO_RS17810
location: 47407..47754
location: region:47407-47754:1
so has part: feature:47407-47754:1:exon

WP_015282522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47407-47754:1:exon

THIMO_RS17815
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17815
old locus tag: Thimo_3752
so part of: sequence
location: 47758..48030
location: region:47758-48030:1
so has part: feature:47758-48030:1:exon
subclass of: SO_0000010

position:47758:1
position: 47758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48030:1
position: 48030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47758-48030:1:exon

THIMO_RS17815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17815
old locus tag: Thimo_3752
inference: COORDINATES: protein motif:HMM:NF016957.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB3 family type IV secretion system protein
translation: MSDPLFQGMTRPAMLAGVTYSGVILNMMLVITPFVMLNSLWSLLAAIPIHGAMWLVCKWDPRFFDLVMVWMQTSANARHRYIWKGSTYRP
SIO_010081: THIMO_RS17815
subclass of: SO_0000673
so part of: THIMO_RS17815
location: 47758..48030
location: region:47758-48030:1
so has part: feature:47758-48030:1:exon

WP_015282523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47758-48030:1:exon

THIMO_RS17820
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17820
old locus tag: Thimo_3753
so part of: sequence
location: 48027..50375
location: region:48027-50375:1
so has part: feature:48027-50375:1:exon
subclass of: SO_0000010

position:48027:1
position: 48027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50375:1
position: 50375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48027-50375:1:exon

THIMO_RS17820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17820
old locus tag: Thimo_3753
inference: COORDINATES: protein motif:HMM:TIGR00929.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB4 family type IV secretion/conjugal transfer ATPase
translation: MNALIKIHSEERTAATLVPIQSHLTAGIAKTRDGALVAAFELGGTAFEAKTPEQRDRYKEQLNVALRNSASPRLALWSALTRRRVHPDLAREYPNAFAQGVADAYTGLQEARTLYQNRLWLTLVYRVTGLRTEIAFSKKADKRLVRNLLTAGIDELEEITAKLGQALVDYSPRRLGVYEHADNRFSEIAELYGLLLNHNAERVPLGPYDLSQAVGRNRLLFGREIFEIRRPGNSRFGAALAIKEYVPRTYPEMFTGLMEEPYELNWVQSFAFLEKDKAKDLFATQRRRLVSAGDAAISQVEALEDAMDQLISNRFVLGEHNAALIIYGDDLEALARNVAFGHATLSDPGNVIVREDMALEGQVYATLPGNTKYRPRKAPVTSLNFAAMSPFYAFPTGSPNGHHWGEAVSLFRSTVDTPLWFSPHVGDLGHTSVIGMSGAGKTALLAFLLCQFQRFPVRHVILDKDQGLKLAVLALDGEYLSLKTGEPTGFNPFALPLTASHSNYLHDLVRLLVGGGEGNWDANASREVEEGIRAVYSLRPENRRLGSLAQFLDGTQLGGVAERLRPWVGEGRFAWAFDNREDTLELGRLTGFDVTEFLDHPDLRTPITSYLLYRTEPLIDGTPFALWIDEFWRLLDDPYFEGFVRDKLKTIRKKDGIVITSTQSPADALGSRIASALLEQTPTKIFLPNEYADEKDYRDGFKLTPAEWDLLRPLTKSSRKFLLKQAAGSSLVDFNLAGMDREMAILSGTERLIRIADGLAEANGGDLPEDWLSLLEQKRRSP
SIO_010081: THIMO_RS17820
subclass of: SO_0000673
so part of: THIMO_RS17820
location: 48027..50375
location: region:48027-50375:1
so has part: feature:48027-50375:1:exon

WP_015282524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48027-50375:1:exon

THIMO_RS17825
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17825
old locus tag: Thimo_3754
so part of: sequence
location: 50372..51100
location: region:50372-51100:1
so has part: feature:50372-51100:1:exon
subclass of: SO_0000010

position:50372:1
position: 50372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51100:1
position: 51100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50372-51100:1:exon

THIMO_RS17825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17825
old locus tag: Thimo_3754
inference: COORDINATES: protein motif:HMM:NF019608.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MKKHLLVAVVGAALAGPLSGPAHAAGVPVIDASNLAQAVAQVQALADQLTTLQDQLNTLRDQYTTITNMYNEMRGITGHALMLPNPVDALHDFLPAANLDPDDLLSGPLAALANSLRDANELYSAAELFGGTHLTGAARQYQERSDFIFSYMALAKEAYENIAARRATLEGFATAAGTATTEKAILDLNARIAAENALLLNDLAQLQALQIMAQMQEQNLVHNSQGLHANRPTGVGDLDFGE
SIO_010081: THIMO_RS17825
subclass of: SO_0000673
so part of: THIMO_RS17825
location: 50372..51100
location: region:50372-51100:1
so has part: feature:50372-51100:1:exon

WP_015282525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50372-51100:1:exon

THIMO_RS17830
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17830
old locus tag: Thimo_3755
so part of: sequence
location: 51151..51588
location: region:51151-51588:1
so has part: feature:51151-51588:1:exon
subclass of: SO_0000010

position:51151:1
position: 51151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51588:1
position: 51588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51151-51588:1:exon

THIMO_RS17830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17830
old locus tag: Thimo_3755
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRATALLALGLPVVANAWTVEGVDMDAVPWAELCPSIEAVELTTGAGSCATVHPASHRHAKWDGFDMGVKEPSLNCRKLEREYQRFTSPRPGTTEATKPRDRWGTCIGAFSRALKLRAEEPGRFSEPLDTWRQRYFEGYIHREG
SIO_010081: THIMO_RS17830
subclass of: SO_0000673
so part of: THIMO_RS17830
location: 51151..51588
location: region:51151-51588:1
so has part: feature:51151-51588:1:exon

WP_015282526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51151-51588:1:exon

THIMO_RS17835
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17835
old locus tag: Thimo_3756
so part of: sequence
location: 51595..52707
location: region:51595-52707:1
so has part: feature:51595-52707:1:exon
subclass of: SO_0000010

position:51595:1
position: 51595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52707:1
position: 52707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51595-52707:1:exon

THIMO_RS17835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17835
old locus tag: Thimo_3756
inference: COORDINATES: protein motif:HMM:NF016491.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MDVFTSLFEALDEVLGDYVNEAITAATGYVSGPIAVLGTISFIAMGAVLLRGMSEIPLAKFVQTAALLALVFALAGTAGHYNTYLADHLRSFPDELLATFAGTALGNDAAIGAVLDRIGDQAMTGISAIWSAGGFTDPGPSLFAAVLFVIFLIFGVAAVVALATAKIGLSLVVAVGPLMILGLLFQSTREYFTKWLSYGIQFAFLAMFVGGIAGMADAIVDTYIDALDDSAENVDLVALMAPALMLLLLAKIFAELPHMASSLSGGIGLAVGNTAWRGIQGAMHQAGGKHIDAWRDAARWRRVGRAEALHNRMVETRKAVVDRLVNGAPRVSRADANRPASLSGASAANRDLDREARDHVEARRRRRAGG
SIO_010081: THIMO_RS17835
subclass of: SO_0000673
so part of: THIMO_RS17835
location: 51595..52707
location: region:51595-52707:1
so has part: feature:51595-52707:1:exon

WP_015282527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51595-52707:1:exon

THIMO_RS17840
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17840
old locus tag: Thimo_3757
so part of: sequence
location: 52709..52900
location: region:52709-52900:1
so has part: feature:52709-52900:1:exon
subclass of: SO_0000010

position:52709:1
position: 52709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52900:1
position: 52900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52709-52900:1:exon

THIMO_RS17840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17840
old locus tag: Thimo_3757
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQYPRPLLTALLALLLPALLGACSTVPKAPKCDQSAYRSLNPAHYDPVKESTRADVPFLLPEA
SIO_010081: THIMO_RS17840
subclass of: SO_0000673
so part of: THIMO_RS17840
location: 52709..52900
location: region:52709-52900:1
so has part: feature:52709-52900:1:exon

WP_015282528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52709-52900:1:exon

THIMO_RS17845
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17845
old locus tag: Thimo_3758
so part of: sequence
location: 52935..53582
location: region:52935-53582:1
so has part: feature:52935-53582:1:exon
subclass of: SO_0000010

position:52935:1
position: 52935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53582:1
position: 53582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52935-53582:1:exon

THIMO_RS17845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17845
old locus tag: Thimo_3758
inference: COORDINATES: protein motif:HMM:NF016238.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB8/TrbF family protein
translation: MERFLDWDYDANEAARRQARIAWVVAALCLLLALASVVAVTVLAPLKTVEPVFVRVDSATGAVDVLHRIDEEVGIGRQDLLDKGYLARYVRAREGYFFPTVQEQYRRVMLMSVGDARASYVQGFSKDNPDAPVNLYQDHKTVEVTIKSISFLRKGLAQVRYVAALGDGEETRRQHWISTIAYEYEPDASIPLSVLADNALGFAVTDYRAEPEDAQ
SIO_010081: THIMO_RS17845
subclass of: SO_0000673
so part of: THIMO_RS17845
location: 52935..53582
location: region:52935-53582:1
so has part: feature:52935-53582:1:exon

WP_015282529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52935-53582:1:exon

THIMO_RS17850
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17850
old locus tag: Thimo_3759
so part of: sequence
location: 53579..54391
location: region:53579-54391:1
so has part: feature:53579-54391:1:exon
subclass of: SO_0000010

position:53579:1
position: 53579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54391:1
position: 54391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53579-54391:1:exon

THIMO_RS17850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17850
old locus tag: Thimo_3759
inference: COORDINATES: protein motif:HMM:NF015487.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbG/VirB9 family P-type conjugative transfer protein
translation: MSRIALLYRWAAPMTAAGIALALLVPASCMAATYPKASGVDGRLRYTSYHPDQVYNLQAAIGRALFIQFADGEEMEKFYTGDSDAWEVGKHANMIAIKPTAEIPDTNLIVSTSAGRVYTFDLSLNDRAPMYGIRFSYPEEQHQASETARAKRELSASLDPHAQTRKNFRYAGAGSRAVQPSEVFDNGTHTFMRFPENTIFPSVFAIGPDGGETLVNKTVRGNWLILPAVGREWRLRSGKAVMCVRNDAFAPSGIDNPGETTSRAIERAAR
SIO_010081: THIMO_RS17850
subclass of: SO_0000673
so part of: THIMO_RS17850
location: 53579..54391
location: region:53579-54391:1
so has part: feature:53579-54391:1:exon

WP_015282530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53579-54391:1:exon

THIMO_RS18610
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
gene: virB10
locus tag: THIMO_RS18610
old locus tag: Thimo_3760
so part of: sequence
location: 54388..55557
location: region:54388-55557:1
so has part: feature:54388-55557:1:exon
subclass of: SO_0000010

position:54388:1
position: 54388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55557:1
position: 55557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54388-55557:1:exon

THIMO_RS18610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
gene: virB10
locus tag: THIMO_RS18610
old locus tag: Thimo_3760
inference: COORDINATES: protein motif:HMM:NF038091.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein VirB10
translation: MTGVEATADQGFDQIVERGDVPIARAASPLWKWAFIGTMVTLGVGALAAVFYAELSDPAPVEEGEERRPRLRFNVGDYEVPTFDPPVPEPVVEPAHVEVPEPPVMPYIPEIPPPEPRAGYPIPELPRPIPLEPESEIEPVETPEEIARKRRLAAPLGGSGGSISSVGSEAGEGAERNRGGLDLSVTRAATATARRLSDMTFLLPKGTYIGCILDTAIQSDQAGMVGCTLPRDVYGADGTVVLLDRGSQVLGEYRSATLSYGKRRIFVVWDRVRTPEGVIVDIASPGTGPLGRSGMGGKVDNHYWERVGIPVLMSAVSFGVQSYAREQLTSDQSRFIESTTTDSLSTVLAEFAKIKPTLHRNQGDPINILVARDVDLAPVYQLRRRSDGR
SIO_010081: THIMO_RS18610
subclass of: SO_0000673
so part of: THIMO_RS18610
location: 54388..55557
location: region:54388-55557:1
so has part: feature:54388-55557:1:exon

WP_015282531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54388-55557:1:exon

THIMO_RS17860
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
gene: virB11
locus tag: THIMO_RS17860
old locus tag: Thimo_3761
so part of: sequence
location: 55547..56623
location: region:55547-56623:1
so has part: feature:55547-56623:1:exon
subclass of: SO_0000010

position:55547:1
position: 55547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56623:1
position: 56623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55547-56623:1:exon

THIMO_RS17860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
gene: virB11
locus tag: THIMO_RS17860
old locus tag: Thimo_3761
inference: COORDINATES: protein motif:HMM:TIGR02788.1
GO component: GO:0043684 - type IV secretion system complex [Evidence IEA]
GO process: GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type DNA transfer ATPase VirB11
translation: MAGEHAAHALLHDILGPIRPILAREDVTDLCINGPGLLFVEDAHGWERIPADNLTGTWLSGFAKAVASYMSASIGERSPILSGHLPTGERIQIVLPPASEEPSITIRRPSHVTFSLDELAEKGAFDLIAPHLEKKRTVGKEGAGQGGSIEAVGHRESVRCRLAGWNAEDQASVPGILREIVAHRLNVIISGATGSGKTTLSKAMIAEIPLEERLIAIEDAKELQFPHANTVRLFFSRDGAGVSPVTVKDLLVSCLRMKPDRIMLAELRDDETYFYLRNVGSGHPGSITTIHANSAAAAVEQLMLMVRQSSAGAGLTREDIRGLVFHLVDVIIQMERKRVTEIRFLPEASEGARERLPC
SIO_010081: THIMO_RS17860
subclass of: SO_0000673
so part of: THIMO_RS17860
location: 55547..56623
location: region:55547-56623:1
so has part: feature:55547-56623:1:exon

WP_015282532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55547-56623:1:exon

THIMO_RS17865
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17865
old locus tag: Thimo_3762
so part of: sequence
location: 56617..58536
location: region:56617-58536:1
so has part: feature:56617-58536:1:exon
subclass of: SO_0000010

position:56617:1
position: 56617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58536:1
position: 58536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56617-58536:1:exon

THIMO_RS17865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17865
old locus tag: Thimo_3762
inference: COORDINATES: protein motif:HMM:NF014581.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MLKRPTAAIKWVIALSIPLGLVSFLPVASWVYAELCDYKFMVVVWLSGLQHGLQPDNLLLAGLAGGASAIGIPAFVAFALLPPKPLHGSARLARPGEIGKAKLYKAGAHSILLGRHRGNLLAFNGDLHPFLAAATGTGKGVGFVVPNLLHWQGSAIVLDIKGENYSLTSGYRGRALGQRVFRFDPLEELGRTHGFNVLDYVRDGDLRVTDVQTVASILVPNESHDPYWDNVARDLLIGLTLLALEAGPAMGWPVTIGQVHRLLRSEEESGEYLQALLEELAGRGIEISSLCKRYVLSFCNEPEKPRGSIKSALATKLTLWANPLIDRATSHSDFDLRRFRREPQSLYIAIAPDDLQRLAPLVRLLIEFFLSSNTKAGETPADDQGLSVPVLMLLDEFLSLGRVDKLVHALSYVRGWGIRIATVIQSEAQLQAVYGRELAEAFIDNHRARVYYRPPVHRRDLAEAISKIVGQKTVNQTSFGYGDGRRSKQVSKTGQSILDADEIANLSDDETIVLVEGVRPLVGKKLRYYRDKTFKRRQLQALPLPAPLDIELQDAPRVTIQRENEAEEGAENTIEPAESPERAQPNRYTSAGAVRTAINEIPVPRGQPSPEELEQMAQALAEITYYADPEALAAFAEAA
SIO_010081: THIMO_RS17865
subclass of: SO_0000673
so part of: THIMO_RS17865
location: 56617..58536
location: region:56617-58536:1
so has part: feature:56617-58536:1:exon

WP_015282533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56617-58536:1:exon

THIMO_RS18615
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS18615
old locus tag: Thimo_3763
so part of: sequence
location: 58563..59183
location: region:58563-59183:1
so has part: feature:58563-59183:1:exon
subclass of: SO_0000010

position:58563:1
position: 58563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59183:1
position: 59183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58563-59183:1:exon

THIMO_RS18615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS18615
old locus tag: Thimo_3763
inference: COORDINATES: protein motif:HMM:NF019069.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbM/KikA/MpfK family conjugal transfer protein
translation: MNRTPIVLSLSASLLGAGLGASTPAQALSGDQESACGAILCLVGGSGVAECAPYLARYFAITAPNPAKLFDRRLDFLNLCPASDLPGDVRPLIARYGATCQPATLVNWLNAQIRSCQIRDWDGSDDCRPTGDEWRMCAPFFDHGYTTYEAPTLHEQCREERDGYGYLVETCFYTWTEAGAPTPTETSPTPTGTWPFGRTSRFDLTD
SIO_010081: THIMO_RS18615
subclass of: SO_0000673
so part of: THIMO_RS18615
location: 58563..59183
location: region:58563-59183:1
so has part: feature:58563-59183:1:exon

WP_015282534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58563-59183:1:exon

THIMO_RS17875
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17875
old locus tag: Thimo_3764
so part of: sequence
location: 59194..59484
location: region:59194-59484:1
so has part: feature:59194-59484:1:exon
subclass of: SO_0000010

position:59194:1
position: 59194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59484:1
position: 59484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59194-59484:1:exon

THIMO_RS17875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17875
old locus tag: Thimo_3764
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MENDIEMAKADRSRQRALVNKEKVSAALQELADEHRGNPRSDTARLREVLDDVEEALSAGASHSAVLDTLHNQGFTLTLSSFQSTLARLRRERRTT
SIO_010081: THIMO_RS17875
subclass of: SO_0000673
so part of: THIMO_RS17875
location: 59194..59484
location: region:59194-59484:1
so has part: feature:59194-59484:1:exon

WP_015282535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59194-59484:1:exon

THIMO_RS17880
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17880
old locus tag: Thimo_3765
so part of: sequence
location: 59996..61645
location: region:59996-61645:1
so has part: feature:59996-61645:1:exon
subclass of: SO_0000010

position:59996:1
position: 59996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61645:1
position: 61645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59996-61645:1:exon

THIMO_RS17880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17880
old locus tag: Thimo_3765
inference: COORDINATES: protein motif:HMM:NF025056.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HEAT repeat domain-containing protein
translation: MAQAHAFISYVRENSDAVDMLVEELRSSAVSVWIDRNDISPGEYWKDAIHNAIADGAFFIACFSKELNERKESFMHGELRLAIDRLRNMPRERIWFIPVLLNETEIPSHRISSSETLREINAIRLFPDWQLGIKNILRAMKLEDPTVRRVLHLTNLVRYHERERLYATKQLIELGNAAAEAIPALITALRDEEETVRASAADALGEIGLPAVPALITALRDEEWEVRERAAEALEKIGPAASQAIPALITALRDEEDTVRASAADALGEIGLPAVPALITALRDEEGEVRAFATRALGEIGTPAVPDLITAYHDEEAAVRASAAIALGKIGTAFREPFPGARKTIHYKDDSNVDDDMRCIATEAFEQIGIPADGVVPILITALGHEEWIVRERAAEALGKVGPAASEAIPALIAALRRNYRDFGMIKKIAEALGEIGPAASEAVSDLIVAIRDLSQGIGDPGWEISKGEAREQLSDALGKIGPAAVPALMTALRDDEDEVRESAAGALGEIGPAASEAIPALNEAVQDTKSFVRESAARALMQIQMITA
SIO_010081: THIMO_RS17880
subclass of: SO_0000673
so part of: THIMO_RS17880
location: 59996..61645
location: region:59996-61645:1
so has part: feature:59996-61645:1:exon

WP_015282536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59996-61645:1:exon

THIMO_RS17885
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17885
old locus tag: Thimo_3766
so part of: sequence
location: 62174..63169
location: region:62174-63169:1
so has part: feature:62174-63169:1:exon
subclass of: SO_0000010

position:62174:1
position: 62174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63169:1
position: 63169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62174-63169:1:exon

THIMO_RS17885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17885
old locus tag: Thimo_3766
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018443219.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MANELVSAKSGVLTASGDARGLPSLIVRAGGGAERRYLEFFAAQIRNRNTREAYLRAVRDFLDWAETEARIEDLLDIEPLHVAAWVEIKTQTYEAQSVKQQLAALRHLFDWLVTGHVLHTNPASFVRGPKFSYTKGKTPILTPTEARKLIRSIPTDTLVGLRDRALIGLMIYTFARVSAAVTMNVKDVYRKQESLWVRLHEKGGKHHEMPCQHNLKEWLQEYIEAAGIAEDLNGPLFRTVDRKTKQLGANRLDRQRAWAMVKRRAKKAGIDTPGICNHTFRGTGITAYLENPEAKLEHAQQMAAHSDPKTTRLYDRRSDQVSLDEVERIGI
SIO_010081: THIMO_RS17885
subclass of: SO_0000673
so part of: THIMO_RS17885
location: 62174..63169
location: region:62174-63169:1
so has part: feature:62174-63169:1:exon

WP_015282537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62174-63169:1:exon

THIMO_RS17890
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17890
old locus tag: Thimo_3767
so part of: sequence
location: complement(63209..63877)
location: region:63209-63877:-1
so has part: feature:63209-63877:-1:exon
subclass of: SO_0000010

position:63209:-1
position: 63209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63877:-1
position: 63877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63209-63877:-1:exon

THIMO_RS17890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17890
old locus tag: Thimo_3767
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005963073.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MGEPPEMEQRQPGPRPVLLWHQKGGTGKTTLAVGCAAALAGLGRRVLLLDLDPQANAAAWGERFADALGVQVRCDSGLDLARRLGVDGPGLGAGFDDVLVDCPPTIGEHTLDIITAGDLLLIPARPAWPDIWALERVAVLLDDLRTRGDAPRATVIFNQVRDEDLHPFQAGAAELGFNVSEIAIPADAAWPALFTGGLPPPLIRTLLMEISPHLRPVCSADA
SIO_010081: THIMO_RS17890
subclass of: SO_0000673
so part of: THIMO_RS17890
location: complement(63209..63877)
location: region:63209-63877:-1
so has part: feature:63209-63877:-1:exon

WP_015282538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63209-63877:-1:exon

THIMO_RS18620
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS18620
old locus tag: Thimo_3768
so part of: sequence
location: complement(63911..64438)
location: region:63911-64438:-1
so has part: feature:63911-64438:-1:exon
subclass of: SO_0000010

position:63911:-1
position: 63911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64438:-1
position: 64438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63911-64438:-1:exon

THIMO_RS18620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS18620
old locus tag: Thimo_3768
inference: COORDINATES: protein motif:HMM:NF013122.2
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3'-5' exonuclease
translation: MRTVFLDLETTGLDPRTDEIVEIGILDEDSQILLDTLVRPVRHRSWPGAQRFHGIAPADVQDAPTHEALRPRIIEAVSDALVVIYNAPFDAGFLRFELEASAEVRCAMREFAEVFGEWSDWHGNYRWQKLHVAAAYVGFDWDGASHRAINDCQATRAVWRYLRDPTERAKRDART
SIO_010081: THIMO_RS18620
subclass of: SO_0000673
so part of: THIMO_RS18620
location: complement(63911..64438)
location: region:63911-64438:-1
so has part: feature:63911-64438:-1:exon

WP_015282539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63911-64438:-1:exon

THIMO_RS17900
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17900
old locus tag: Thimo_3769
so part of: sequence
location: 64570..64812
location: region:64570-64812:1
so has part: feature:64570-64812:1:exon
subclass of: SO_0000010

position:64570:1
position: 64570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64812:1
position: 64812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64570-64812:1:exon

THIMO_RS17900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17900
old locus tag: Thimo_3769
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012979572.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WGR domain-containing protein
translation: MTPSATQRSWINPEKARYYQVFLDQDLFGDWTLIKVWGGIGSNHGRMHSSGVASYEAGIELVDEIARRRTRRGYRSAPTD
SIO_010081: THIMO_RS17900
subclass of: SO_0000673
so part of: THIMO_RS17900
location: 64570..64812
location: region:64570-64812:1
so has part: feature:64570-64812:1:exon

WP_015282540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64570-64812:1:exon

THIMO_RS17910
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17910
old locus tag: Thimo_3771
pseudo: true
so part of: sequence
location: complement(65418..>66914)
location: region:65418-66914:-1
so has part: feature:65418-66914:-1:exon
subclass of: SO_0000010

position:65418:-1
position: 65418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66914:-1
position: 66914
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65418-66914:-1:exon

THIMO_RS17910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17910
old locus tag: Thimo_3771
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558016.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family transposase
SIO_010081: THIMO_RS17910
subclass of: SO_0000673
so part of: THIMO_RS17910
location: complement(65418..>66914)
location: region:65418-66914:-1
so has part: feature:65418-66914:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65418-66914:-1:exon

THIMO_RS17915
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
gene: tnpB
locus tag: THIMO_RS17915
old locus tag: Thimo_3772
so part of: sequence
location: complement(67017..67379)
location: region:67017-67379:-1
so has part: feature:67017-67379:-1:exon
subclass of: SO_0000010

position:67017:-1
position: 67017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67379:-1
position: 67379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67017-67379:-1:exon

THIMO_RS17915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
gene: tnpB
locus tag: THIMO_RS17915
old locus tag: Thimo_3772
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006119137.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MFFPEGRVRVFLHGRPVDMRKSFTGLIALTQQALAQDPLSGHLFVFVNRRGDYLKVLYWDRSGFCLWCKRLERGRFISDWRKRQDQELDVTGLRLLLEGIEPARRRLRYAREGEKRTAIW
SIO_010081: THIMO_RS17915
subclass of: SO_0000673
so part of: THIMO_RS17915
location: complement(67017..67379)
location: region:67017-67379:-1
so has part: feature:67017-67379:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67017-67379:-1:exon

THIMO_RS17920
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17920
old locus tag: Thimo_3773
so part of: sequence
location: complement(67379..67681)
location: region:67379-67681:-1
so has part: feature:67379-67681:-1:exon
subclass of: SO_0000010

position:67681:-1
position: 67681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67379-67681:-1:exon

THIMO_RS17920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17920
old locus tag: Thimo_3773
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015281876.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATTTRVRRTHADWQAVISRAERSSLSTAAFCAGEGISTASFYLWRKRWRASNPPQGDVGEEAPEFLDLGLLSRPANTEGASWDLELDLGDGVVLRLRRA
SIO_010081: THIMO_RS17920
subclass of: SO_0000673
so part of: THIMO_RS17920
location: complement(67379..67681)
location: region:67379-67681:-1
so has part: feature:67379-67681:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67379-67681:-1:exon

THIMO_RS17925
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17925
old locus tag: Thimo_3774
so part of: sequence
location: 67696..68994
location: region:67696-68994:1
so has part: feature:67696-68994:1:exon
subclass of: SO_0000010

position:67696:1
position: 67696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68994:1
position: 68994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67696-68994:1:exon

THIMO_RS17925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17925
old locus tag: Thimo_3774
inference: COORDINATES: protein motif:HMM:NF012307.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: reverse transcriptase domain-containing protein
translation: MIDDSSHCPHRARAEKNASPLPVTDGKFDFVHEDAYLPPGADRQDRKIFEKQQEQHFRAIHRKVLQDRWIFSPFLEKSIPKIAGGERIISLATIRDTLVQRRLYEYLYPIVDPLLSDACCAYRRGSGAHNAIKQIRNALDAGYVHVLDADIKSFFDRVDHETLLAIARDLPIDERALRLLQIYLTTPRVTSEDRRKADSAKPRTKYSREPRTLGIPQGGVISGMLANLLLASFDKEMQQGEDILVRYADDFLVCCQTEQAANDADVRAAHALDALGGLELHPDKTAVRDATDGVDFVGFRIGRGFTRVRSANLAKFKKGIREVIDTHKPKTDSNWDLRRLSRRLSYKIQGPIDEIRKHNLAKHPHHRSWIGFYRIVDDEKQIKNLDRWIREQISRYVWQQHHKKVTAKHMREAGLPSLYGTLWKARKPPESA
SIO_010081: THIMO_RS17925
subclass of: SO_0000673
so part of: THIMO_RS17925
location: 67696..68994
location: region:67696-68994:1
so has part: feature:67696-68994:1:exon

WP_015282542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67696-68994:1:exon

THIMO_RS17930
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17930
old locus tag: Thimo_3775
so part of: sequence
location: complement(69180..70223)
location: region:69180-70223:-1
so has part: feature:69180-70223:-1:exon
subclass of: SO_0000010

position:69180:-1
position: 69180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70223:-1
position: 70223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69180-70223:-1:exon

THIMO_RS17930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17930
old locus tag: Thimo_3775
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRVEPSAPSARPREILATFGRAYPHLWSAVDRLRAMRADDFPEWPDWCFLPMQGAYAILSGGGDRRVPLDRIHHVGIVAALAAWRVTQGVYLFDPAVAEAVAATPLDGELPTDLLYRLPEWCVYIETPDRTWEGRALHGFWAHVEWEEGDGANELRLVLDTAETPDLALDPVRGLIPVPLILGEGSLADALDRLAASSRRRLEAMGLQNLAMPPSAPSRLLGETQPLVALVLYLCAENAEIGDGTRRPSVPVPKRTKRGPRLFPPDRLTAWDVGLRLGAALRRAESSDEPGVEQGERARPRAHIRRAHWHTFRVGEGRRGYKVKWMAPTPVNVRDPEALPATLRPVS
SIO_010081: THIMO_RS17930
subclass of: SO_0000673
so part of: THIMO_RS17930
location: complement(69180..70223)
location: region:69180-70223:-1
so has part: feature:69180-70223:-1:exon

WP_015282543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69180-70223:-1:exon

THIMO_RS17935
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17935
old locus tag: Thimo_3776
so part of: sequence
location: complement(70220..70564)
location: region:70220-70564:-1
so has part: feature:70220-70564:-1:exon
subclass of: SO_0000010

position:70220:-1
position: 70220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70564:-1
position: 70564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70220-70564:-1:exon

THIMO_RS17935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17935
old locus tag: Thimo_3776
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEGPLHAKLDPQRFPNMSLPMAAILGFVLERQYTTPALADVQVTPDGHVLGWPSEEECVGHSMHLGVEADLRANLSRLGMAAGLDQQEWTLFAAMVRSQLGIELGELAGKGGS
SIO_010081: THIMO_RS17935
subclass of: SO_0000673
so part of: THIMO_RS17935
location: complement(70220..70564)
location: region:70220-70564:-1
so has part: feature:70220-70564:-1:exon

WP_015282544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70220-70564:-1:exon

THIMO_RS17940
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
gene: brxL
locus tag: THIMO_RS17940
old locus tag: Thimo_3777
so part of: sequence
location: complement(70557..72656)
location: region:70557-72656:-1
so has part: feature:70557-72656:-1:exon
subclass of: SO_0000010

position:70557:-1
position: 70557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72656:-1
position: 72656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70557-72656:-1:exon

THIMO_RS17940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
gene: brxL
locus tag: THIMO_RS17940
old locus tag: Thimo_3777
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013219021.1
GO function: GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
GO process: GO:0030163 - protein catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BREX system Lon protease-like protein BrxL
translation: MDALDTKLNEVFSGRVVRKDLVQQVKKGTNVPTFVLEFLLAKYCASNDPDEIAAGIEATLEYLARHYVRPDESNKAQSTVQQKGTHKYVDKVHVRHVEKEKRHWAAMENFNSQRIAINQKFYKDNDRLLEGGLWAEVTVGYNDVEDDNYAFYVEDLRPIQLSRFDFDRYLEGRARFTRDEWMDIVLRSVGLKPSKLSPRLKLHFIARLLPLVEPNYNFIELGPRGTGKSYFFSEFSPYATLVSGGQATKATLFYNNARGKVGLVGFWDAVAFDEVAGIKIKDQDAIQIMKDYMANGRFSRGVEVIANASMAFVGNIDESIHQLVNSTEHDLFLPLPAALDLAVMDRFYCYLPGWEIPKNSSAYLTGAFGFITDYLAEAFHHLFKQTNRYEYVNSHIRLGPAVEGRDEKGIKKTVAAFLKILHPGGAPEPAELEEYVAYAVEARRRVKEQMNKRKPDDEFARINLSYFGADGSEVVVYCPESKGAPATQSPSRRTLDRGAEARAPTASTVEGPAEIQLTRPAAVPDDEQAAPEHPREPELKEQHFTILYGDTGYTYDSLIGPYLAGARSVTIEDPYIRAPHQIANFVRFCETVSKTPGVRSVTLVTSYDDQTNLADLNDKLGELKQSLMEVDIVLEIRINEKLHDREIRLDNGWIIKLGRGLDFYQKPESWFAIGASDFSLRKCLETKVDIFREAPRSND
SIO_010081: THIMO_RS17940
subclass of: SO_0000673
so part of: THIMO_RS17940
location: complement(70557..72656)
location: region:70557-72656:-1
so has part: feature:70557-72656:-1:exon

WP_015282545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70557-72656:-1:exon

THIMO_RS17945
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17945
old locus tag: Thimo_3778
so part of: sequence
location: complement(72678..75233)
location: region:72678-75233:-1
so has part: feature:72678-75233:-1:exon
subclass of: SO_0000010

position:72678:-1
position: 72678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75233:-1
position: 75233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72678-75233:-1:exon

THIMO_RS17945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17945
old locus tag: Thimo_3778
inference: COORDINATES: protein motif:HMM:NF020249.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PglZ domain-containing protein
translation: MKIRDYIQDQLRERLAAAECLVLYDAQGRYRELALGLAGPDCTVVDTSESSIQGRAEAMAAWLALGDAAPGSRQLLVYVPRKKPLADRECQADPFQTFALGGDTFPRGEGDSYLSLCLQAMPDHEASVYALFEGGAPPTFETVDALDSGATWPKLRTLLEVESPREILVGLLSPTDRQGPALQADQGWLGEYREFAQAALGLSSHIKVGGWADVREELARFVLFSEFVLDLPGDPPGNLPSALAAVPRADPHRRPLIYAVCDYLRDARTHQDVYIELANAVSRELNLPVQMAQTQEFGSRDTFLFEERAYLKRCGVAAGGGDLDTARTIVEQRRRSIWAQSEERGAAWVIADRGLEMLQAVIDLEAELGGLKKGLAALVDFYADRARLADSLHRSFERTVHDAYGQTEGLEDLIESARHRHRAFSDALQKRFMQAVREEGWPVSGFTRHTQVFDQFVAPVLAEQRRIALLMVDALRYELAAELATRLPQGMKARLDKALGQIPTITSVGMAALLPGADGKLALVRENGELVPTIGSKRVNGPTERVDYVRGIYGDRVAAVSLDDLLKAPRYRPKLKETVHLLLVKTTEIDTAGENMSGAALGVMQGVLEKFLRAVKILGEMGFERAVFAADHGFVLLGEQLPGDKVEKPQGEWTLSKVRCLMGSGSGSGSGAPAKGVACLRKEDLGVRGDLTHLAVPESLGAFVTGQTFMHSGVSLPECLVPVVTVDLAAETPAGRSAARLQLQYRGGKTDRITTRRPMIEVVLFLQQDLFGAETLRFSLEAKAGKRLVGQVAASANVDPATGLVVIEPGAAVKIPLRMDEKFEGDFTVVAIDPVTQVTYDTLKLKTDYLD
SIO_010081: THIMO_RS17945
subclass of: SO_0000673
so part of: THIMO_RS17945
location: complement(72678..75233)
location: region:72678-75233:-1
so has part: feature:72678-75233:-1:exon

WP_015282546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72678-75233:-1:exon

THIMO_RS17950
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17950
old locus tag: Thimo_3779
so part of: sequence
location: complement(75230..75727)
location: region:75230-75727:-1
so has part: feature:75230-75727:-1:exon
subclass of: SO_0000010

position:75230:-1
position: 75230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75727:-1
position: 75727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75230-75727:-1:exon

THIMO_RS17950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17950
old locus tag: Thimo_3779
inference: COORDINATES: protein motif:HMM:NF023276.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3368 domain-containing protein
translation: MPDCRVVNASPLITLAKVGQLGLLEEPGFALIIPDPVAREVLRWPAEDPARKALSAGWGGTPVPVAPDVDIMEWGLGPGESGVLTLARSRQCVAVIDDGAARAAAVALGVRLTGTLGLVLRAARLGRIASAAEILEQLIDVGLRLNNDVVRDALAQVTGESWPRR
SIO_010081: THIMO_RS17950
subclass of: SO_0000673
so part of: THIMO_RS17950
location: complement(75230..75727)
location: region:75230-75727:-1
so has part: feature:75230-75727:-1:exon

WP_015282547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75230-75727:-1:exon

THIMO_RS17955
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17955
old locus tag: Thimo_3780
so part of: sequence
location: complement(75720..75971)
location: region:75720-75971:-1
so has part: feature:75720-75971:-1:exon
subclass of: SO_0000010

position:75720:-1
position: 75720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75971:-1
position: 75971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75720-75971:-1:exon

THIMO_RS17955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17955
old locus tag: Thimo_3780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011142654.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UPF0175 family protein
translation: MIQITVDIPEGSLASLHKDPESFAREMRIAAAIQWYERRELSQERAAELAGLSRLAFVEALGRYGVSPFQVTAVELIREAMDA
SIO_010081: THIMO_RS17955
subclass of: SO_0000673
so part of: THIMO_RS17955
location: complement(75720..75971)
location: region:75720-75971:-1
so has part: feature:75720-75971:-1:exon

WP_015282548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75720-75971:-1:exon

THIMO_RS19460
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS19460
old locus tag: Thimo_3781
so part of: sequence
location: complement(76137..78158)
location: region:76137-78158:-1
so has part: feature:76137-78158:-1:exon
subclass of: SO_0000010

position:76137:-1
position: 76137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78158:-1
position: 78158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76137-78158:-1:exon

THIMO_RS19460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS19460
old locus tag: Thimo_3781
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004146425.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLFLRLLGEEDKGAALLEAVRAVAAGEADPRVFDVEPASFEQVPGAPFAYWVRDGIRRMFRLHPAAESDVRRFTKGLCTTDDFRFLRLYWENRGEKQAVRWFHFVNGGSTTRFYQAVNIAINWYKDGLELKAFLDGKIGKENQWSRWINSVTYYFRPGITWPLRTGRFSPQVLPTGTIFSVRSYAAFMPKDALLCALGLMGSSALDFLLKLSLGRSGHPEFVIGVIQQAPFPQLASSECAILADTARTAWSLKRKLDTATLTSHAFLLPALLQVQGKSLDTRCGSWSDRMQQTEQALAEIQSEIDARCFDLYGFDEADRAGVMASDSLGESGQSDDAETGDGDEDESSGPSADPKVLAAEWFDWLVGVAFGRFDLRLATGEREAPPEPEPFDPLPVCSPGMLTSDQGLPLNEPPSGYPIAFPADGILVADADEVQGQVGSDLMSRLRSILRILAVRIEGGDAPGLAAEALEAELCRLLGTKTLRDWLRRPSGFFADHLGRWSKSRRKAPIYWPLSTESGAYTLWIYYPRLTDQTLYTCVNDHIDPKLKEIGADLERLRGNGDLDAKTRKRADALLELQREIQALREELLRVARLPYKPDQNDGVLISAAPLWKLFRHNPWRNALHSCWETLETGGYDWSHLALALWPERVRALCRTDKSVAIAHGLEDLYGG
SIO_010081: THIMO_RS19460
subclass of: SO_0000673
so part of: THIMO_RS19460
location: complement(76137..78158)
location: region:76137-78158:-1
so has part: feature:76137-78158:-1:exon

WP_015282549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76137-78158:-1:exon

THIMO_RS17965
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17965
old locus tag: Thimo_3782
so part of: sequence
location: complement(78170..78892)
location: region:78170-78892:-1
so has part: feature:78170-78892:-1:exon
subclass of: SO_0000010

position:78170:-1
position: 78170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78892:-1
position: 78892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78170-78892:-1:exon

THIMO_RS17965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17965
old locus tag: Thimo_3782
inference: COORDINATES: protein motif:HMM:NF021564.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2290 domain-containing protein
translation: MRGASRITLTPKQCRTQLQNLVDALLVSGLAVDRLVPVVLWSRGGFCRVSWPPCAETDGGQFFKDFYTVETYLGWLATRHYSAVLFDGSLLQMTLDFRNGEFAGHRLAYIPCPFFLGEEGAEMLRSEPILDVIEMYRARGEECLRLRTPIRFDFDPSAAGADHPASHVTLNDQAFRIPACGPLSLWQFIEFVFLRFYPAVWAENDFLAETAANPLPRQITAEHEQSMHLNWRGDSGRIAG
SIO_010081: THIMO_RS17965
subclass of: SO_0000673
so part of: THIMO_RS17965
location: complement(78170..78892)
location: region:78170-78892:-1
so has part: feature:78170-78892:-1:exon

WP_015282550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78170-78892:-1:exon

THIMO_RS17970
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17970
old locus tag: Thimo_3783
so part of: sequence
location: complement(78879..81023)
location: region:78879-81023:-1
so has part: feature:78879-81023:-1:exon
subclass of: SO_0000010

position:78879:-1
position: 78879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81023:-1
position: 81023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78879-81023:-1:exon

THIMO_RS17970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17970
old locus tag: Thimo_3783
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017836440.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding domain-containing protein
translation: MLEIVYGETEQRQVASQLADVLTAMQLDGTFYIGYPVIASADEKVLVDALLLTKQHGLIAFRFSGESPRPDDHQAWTQLEDAQNRLFYAIDANLGRHDELRSGRKLGVTVETVTLFPTSPNPPGGIAGRFAGLDEVRDAVKACRPVEDAYLRPLEAALQRVTTIKPRKKRVAVKKETSRGGILKEIEKGIANLDQWQKRAAIETPDGPQRIRGLAGSGKTIVLALKAAYLHSQHPDWTIAITFFTRSLYQQFEDLIRRFSFEHLNDEPNWERLQILHAWGGRGREGIYSALAEYSHIVPRDFGYGRAKYGMDGAFQGICRELLTQTALEPNPPIYDALLIDEAQDMPPEFFRLVYRFTKEPKRIVWAYDELQTLSEAVMPGTADLFGRNDVGEPLVTIQNEPARPRQDVILPVCYRNTPWALTLAHALGFGIYREPKLVQHFDDPNLWYDIGYEVLDGKLQLGSNVTLRRAIKSSPDFFARLLNPEDAVITKSFADEIEQAEWVAESIKKNLTDDELEPDDILIVLPSALTAKRNAAVIGEALLRRQIRSHLVGDMTSVDEIFRPGSVALANIYRSKGNEAPMVYLVNAHTCYGGPELTRKRNTLFTAITRCRAWVRVSGWGESSQLLMQEIQAVRSQGFKLSFRIPSEPELRELRRIHRDLSPEEKKALERDEKQLGSLLDKVLSGELQLDMLNAEIREKVEKLQELARNAGR
SIO_010081: THIMO_RS17970
subclass of: SO_0000673
so part of: THIMO_RS17970
location: complement(78879..81023)
location: region:78879-81023:-1
so has part: feature:78879-81023:-1:exon

WP_015282551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78879-81023:-1:exon

THIMO_RS17975
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17975
old locus tag: Thimo_3784
so part of: sequence
location: complement(81049..83040)
location: region:81049-83040:-1
so has part: feature:81049-83040:-1:exon
subclass of: SO_0000010

position:81049:-1
position: 81049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83040:-1
position: 83040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81049-83040:-1:exon

THIMO_RS17975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17975
old locus tag: Thimo_3784
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004146424.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SAM-dependent methyltransferase
translation: MAFDTATRNELQKLVGRVRDLLVKEFTAQCQTLYGIQPDGTALALEKLEHRPENEQTLARLLRDRIDHLAAGLSGSKRRAEAIDRLVREQAFTVLNRLCALRMCEERGLVQECVRQGMGSKGFQVFEKSAASLGGDTFSRYRLYLDLLLDELAIELGVLFDRFAPTGLLFPGETALKALLEQVNVQTLSHIWGEDEAIGWVYQYFNDREAIKATKKQSQSPRNSRELAERNQFFTPRYVVEFLTDNSLGRLWYEMRQGRTALAEICRSLVRRPDEVFLGPDDDHAAPPGTSVVPFRAKKDPRDLKILDPACGSGHFLLYAFDLLLVIYREAWADTHSPRSDLTGTTLAEDYASEADLERATPALILRHNLHGIDIDPRAAQIAALALWLRAQRAWRDQRLKPAERPRVVRTHIVCAEPMPGEKETLADFAGQLRPPVLGQLIQVVFERMRLAGEAGCLLRIEEEIRTAVETARAQWLEGGRPEQTELFPELAGPKQQELRFDLSGVTRDAFWDQAEGRILSGLRRYAEEADLGADMGRRMFAEDAAAGFAFIDLCRQHFDVVVMNPPFGAASTGAKNYITKTYPRSKNDLLAACVERGIGWLHPGGLLGAITSRTAFFLTSFRNWRQGVVLGDAKPLVMADLGHGVMDAAMVEAAAYVLRKQG
SIO_010081: THIMO_RS17975
subclass of: SO_0000673
so part of: THIMO_RS17975
location: complement(81049..83040)
location: region:81049-83040:-1
so has part: feature:81049-83040:-1:exon

WP_015282552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81049-83040:-1:exon

THIMO_RS17980
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
gene: brxC
locus tag: THIMO_RS17980
old locus tag: Thimo_3785
so part of: sequence
location: complement(83065..86694)
location: region:83065-86694:-1
so has part: feature:83065-86694:-1:exon
subclass of: SO_0000010

position:83065:-1
position: 83065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86694:-1
position: 86694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83065-86694:-1:exon

THIMO_RS17980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
gene: brxC
locus tag: THIMO_RS17980
old locus tag: Thimo_3785
inference: COORDINATES: protein motif:HMM:NF033441.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BREX system P-loop protein BrxC
translation: MTIRTLFDPSRQIDRRIEKVIQYDAMAPDLLRQEIAEYQVTEKMTSELEKLLDAIDIGMGEGSPEVGVWVSGFYGSGKSSFTKYLGFALDDHNQIDGKPFLNALQDRIGSTTLRQRLATVASRHRPAVIMLDLASEMLAGASMAEISTVLYVKVMQWAGYSRDRKVAYLELMLERDGKLDAFKEKIAQVVPGMTWEQIKNQPLVANQLASQLAAELYPAVYPTPKSFHDQRLDEVIKVDDQAREMVELARRRSGRENVIFILDEVGQYVAARDALILDLDGLAKNLKAIGGGKVWLIATAQQTLTEDDPRAQINTPKLFKLQARFPVPVDLDASDIREICYLRLLGKAAAGKAQLEARYDQLGQQLRFNTQLHNTRYYQRDLDKQAFCRLYPFLPQHFDILLELLGRLAKTMGGIGLRSAIKVIQDVLISPESPAGPLADQPIGTLATTVTFYDALRRDIQTSFRQLVEAIDKVVRVFGADSAEARVAKTIAILQVLDDFPVSRENIAALLHPRDDAPSQLDAVEQAVNALMDEETIPLAEIDGNLRFMSEAVTELEQQRRGLIPILAERNRIQNDLLKELFTPPPKANLHNTRAVHCGIRTQGVAGPVSIAGDKEELQLLVEFVSEGEIESQKGTRVADSTQSAERNTLFLIGIEPKGLQQQIEEIYRGEEIFAQYRNKTVEKEIGEYLNGQQQRAENLRGELAARLRKGLEQGSFVFQGRPHAVASLGSNLEEAAKRQLEEAAKVVFHKYAEAPIQAESALAERFLKTDRLDRIESRNDPLSLVTATGQIKVTHPALKTVVDLLRHIGREEGRVLLDKLNRAPYGWSKDTLRYLVAALLVGGKIKLRVSGEDITVRGPTAIDALKTNAAFNRVGIDLRDGAVDPESLLRSAERILELTGEDVLPLEAEVSKVVTRRFPDLQRDYAYLASELRNLGLAGAETAESIQDSLSEILKGDASDAAARLGPEECPLFKDLLWARDLDKALKGHLPAIVRRASRYIEAIPKLPAVGPLAALQAEVLEDLAGLREVFAQTDFFTKAPDIQSRVSSVEKAIETAATSLVAEYNADLESEKQRLEQSPNWPRIGGDNQEAFAAQLDALQLAVEPSLDGIRACLDARYPLQQRVAEIAQAIARIVEEQTRQASQDDAEDIDTQVGGGTEGTGPKALVVADFSFPAEIASREQLEDLIQRLEALRAELTRYSKIVFKP
SIO_010081: THIMO_RS17980
subclass of: SO_0000673
so part of: THIMO_RS17980
location: complement(83065..86694)
location: region:83065-86694:-1
so has part: feature:83065-86694:-1:exon

WP_015282553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83065-86694:-1:exon

THIMO_RS17985
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17985
old locus tag: Thimo_3786
so part of: sequence
location: complement(86716..87288)
location: region:86716-87288:-1
so has part: feature:86716-87288:-1:exon
subclass of: SO_0000010

position:86716:-1
position: 86716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87288:-1
position: 87288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86716-87288:-1:exon

THIMO_RS17985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17985
old locus tag: Thimo_3786
inference: COORDINATES: protein motif:HMM:NF020329.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1788 domain-containing protein
translation: MPSLDASFKELQLRLRDGSSLRNTGGDPVYYLVYPPSEMLRVKRRLKVWEKQLRIDGWEPRILSLAKVIGDYFETHPLRPFWLSGEAANPDLDAANETLRAALIDSGHVEEQILKSLAAIETKPGALLIVTDIEAIHPYLRIGAVEQRLQGKVPVPIIILYPGVRSGQTSLSFLGIYPDDGNYRSVHVGG
SIO_010081: THIMO_RS17985
subclass of: SO_0000673
so part of: THIMO_RS17985
location: complement(86716..87288)
location: region:86716-87288:-1
so has part: feature:86716-87288:-1:exon

WP_015282554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86716-87288:-1:exon

THIMO_RS17990
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17990
old locus tag: Thimo_3787
so part of: sequence
location: complement(87269..88066)
location: region:87269-88066:-1
so has part: feature:87269-88066:-1:exon
subclass of: SO_0000010

position:87269:-1
position: 87269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88066:-1
position: 88066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87269-88066:-1:exon

THIMO_RS17990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17990
old locus tag: Thimo_3787
inference: COORDINATES: protein motif:HMM:NF020425.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1819 family protein
translation: MSQDAARPYSTELRKGRGAVAETLTLLGAWVPGMPSTELQALAVEQGIFGSSSAKRTQDLVSVVFARRYLADGGKPASYLKYLVERGADRAVLRQLMLVYTARRNPVLRDFISEVFWTAFAAGAAALRIGEAEDFLKRAAVDGRIARPWSEVMRKRIAGDLLSTLADFGLLEDLKRPTKPIRSYRLLPDTVLFLAHEIHFKRFSDNSILESPDWRLFGLAKEDVVQQLDKVSRAGHYILQYSGDLLRISWRYQTMEECLDAIAGR
SIO_010081: THIMO_RS17990
subclass of: SO_0000673
so part of: THIMO_RS17990
location: complement(87269..88066)
location: region:87269-88066:-1
so has part: feature:87269-88066:-1:exon

WP_015282555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87269-88066:-1:exon

THIMO_RS17995
type: Gene
subclass of: SO_0000704
RO_0002162: 765912
locus tag: THIMO_RS17995
old locus tag: Thimo_3788
so part of: sequence
location: complement(88063..88590)
location: region:88063-88590:-1
so has part: feature:88063-88590:-1:exon
subclass of: SO_0000010

position:88063:-1
position: 88063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88590:-1
position: 88590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88063-88590:-1:exon

THIMO_RS17995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 765912
locus tag: THIMO_RS17995
old locus tag: Thimo_3788
inference: COORDINATES: protein motif:HMM:NF033447.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BrxE family protein
translation: MSTNGTIQSAGGPLERLATLRVLVAYLGEKDQFDWWPTAFLTVTGRRFLELNFPRTLLSAGVGCVCQAAKDLHDQRIGHAGAFHLFRLPHGLEQDVHRFLATDGGRDLVGLISGKEQAVAGLNAMAEEEGACSEGPVRVAALSQCTHRPSLRRVAACYRDAFEHGHRTFPYFTPA
SIO_010081: THIMO_RS17995
subclass of: SO_0000673
so part of: THIMO_RS17995
location: complement(88063..88590)
location: region:88063-88590:-1
so has part: feature:88063-88590:-1:exon

WP_015282556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88063-88590:-1:exon