Vibrio rumoiensis strain FERM P-14531 plasmid 2, complete sequence.
type: Entry
definition: Vibrio rumoiensis strain FERM P-14531 plasmid 2, complete sequence.
sequence version: NZ_AP018688.1
sequence date: 2022-12-25
sequence: sequence
division: CON
label: NZ_AP018688.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00080447
keyword: RefSeq
source: Vibrio rumoiensis
organism: Vibrio rumoiensis
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP018688.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Canu v. 1.6; Pilon v. 1.22\nGenome Coverage :: 658x\nSequencing Technology :: Illumina MiSeq; ONT MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/25/2022 02:55:55\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,845\nCDSs (total) :: 3,725\nGenes (coding) :: 3,628\nCDSs (with protein) :: 3,628\nGenes (RNA) :: 120\nrRNAs :: 9, 8, 8 (5S, 16S, 23S)\ncomplete rRNAs :: 9, 8, 8 (5S, 16S, 23S)\ntRNAs :: 91\nncRNAs :: 4\nPseudo Genes (total) :: 97\nCDSs (without protein) :: 97\nPseudo Genes (ambiguous residues) :: 0 of 97\nPseudo Genes (frameshifted) :: 47 of 97\nPseudo Genes (incomplete) :: 59 of 97\nPseudo Genes (internal stop) :: 16 of 97\nPseudo Genes (multiple problems) :: 20 of 97\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 109617
topology: circular
so has quality: SO_0000988
location: 1..109617
location: region:1-109617:1
RO_0002162: 76258

NZ_AP018688
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00080447
type: BioSample
SIO_000068: biosample

1
title: Vibrio rumoiensis whole genome sequence
author: Sawabe, T.
journal: Unpublished

2
title: Direct Submission
author: Sawabe, T.
author: Mino, S.
journal: Submitted (18-MAY-2018) Contact:Tomoo Sawabe Hokkaido University, Faculty of Fisheries Sciences; 3-1-1 Minato-cho, Hakodate, Hokkaido 041-8611, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109617:1
position: 109617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-109617:1:source
so part of: sequence
organism: Vibrio rumoiensis
mol type: genomic DNA
strain: FERM P-14531
isolation source: waste water
type material: type strain of Vibrio rumoiensis
plasmid: 2
collection date: 1999

76258
type: Taxonomy
SIO_000068: taxonomy

VRUMOI_RS18740
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18740
so part of: sequence
location: 512..3241
location: region:512-3241:1
so has part: feature:512-3241:1:exon
subclass of: SO_0000010

position:512:1
position: 512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3241:1
position: 3241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512-3241:1:exon

VRUMOI_RS18740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18740
EC number: 3.6.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001901413.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MALLRYANLGINKPGILLSKAVSGLGDFYKYLDTTRKYLESTKAVKAIGWEKLDDAQSGVWVQLVEPADNCGDFEKNLKLFLDESTGTVYEASPARWKAVGSAARECPNCRSHGKPKMAYTTEEHADEIASELGNGLSSYECPDGYGWHLTGKSQSNVGFNKSNAISVLDRNVENDSLLLDRLPDHDYLVIRPNTYQLKCQINALQSLQDTPSIHHLPLLRLFEGKDYAKWPNVPYDEHLFNDDYYVLTDGEREGTSQQREFVNIALNTPDFAFLEGPPGSGKTTAICELILQFIKRGKRILLCASTHVAVDNVLERMMSEENIYRDMVLPVRIGDKSSVSQKAKPWQLEEFVKTERTRLLKHLQQQPHISVSQKLLKSKVGEGKYIVERLVLEAANLVCGTTIGLLQHPDIKNKQSTSPIFDVMIIDEASKTTFQEFLVPAVLAKRWIMVGDPKQLSPYVDDGATEVNLQPCLQDSYQREACADIFSARQINIQKREVSLVCTDDEKTIEFYHQQAKAKNVLVASSKGTKTDLPYASVVLGSSAFIAQNADHLPLDLTTIRGLPALPKKLEMRLAAHSRLTRTKIKTGSDSWESQLAWRLARMYEQRLNTESNGSSKTANKLEDDIKALLPFDSEKDTFTAIDRVRRIALPSILESLQVGFERTEYQKQGTALSDGLPYSVLNQRQIRLSFQHRMHPDIAEFSRVHIYHEKALQSPDGQAEKRDWGYRKGSHRCIWHDVKGRKGKQGEITAEVEEILKELKRFDSWAKSNPNVEKNHQKPWEVAVLAFYRAQERAIRQALRKWTEIHHGVRHFYRGEKTSPYIDIQICTVDRFQGHEADFVMLSFANNHPTSFLESPNRLNVAITRAKHQLIVYGNRSAMQKASGVLGTFASNSYWSTTIKTESQEAL
SIO_010081: VRUMOI_RS18740
subclass of: SO_0000673
so part of: VRUMOI_RS18740
location: 512..3241
location: region:512-3241:1
so has part: feature:512-3241:1:exon

WP_089138966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512-3241:1:exon

VRUMOI_RS18745
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18745
so part of: sequence
location: 3238..4347
location: region:3238-4347:1
so has part: feature:3238-4347:1:exon
subclass of: SO_0000010

position:3238:1
position: 3238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4347:1
position: 4347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3238-4347:1:exon

VRUMOI_RS18745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017218262.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQDIILKREIKTETWLIQGEIALADSRPEINCVLQFLHDYPNASSAECSEHLFGDKIGRRVVADRLLNICRLYGLAESNRDQYRLTESGLFALEKDQILVPEDGCWSLCVCHEPLLPHPLFTIEAHTEPSAASIGLGKNRNELNERAKRLVEVPQRVKDIRGLKVEPIGGDSEVRVDKIELKGERISPQGKPYYIEWNVTDGNVDVKRGKDLIFSRRVEPISRQQVLKVLLHSEGLLEQWDEQTEILSVVFENTTESERINMKRSVSVKRPSVHKLGSFDAMKLYNISISALTELDARKWAEWRLEKNINIYATNSKYQIWREKALEPFRDWNFTLPDRAELANQFWIEEYQQNQHTWHVIAAHDWNL
SIO_010081: VRUMOI_RS18745
subclass of: SO_0000673
so part of: VRUMOI_RS18745
location: 3238..4347
location: region:3238-4347:1
so has part: feature:3238-4347:1:exon

WP_089138967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3238-4347:1:exon

VRUMOI_RS18750
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18750
so part of: sequence
location: 4360..5892
location: region:4360-5892:1
so has part: feature:4360-5892:1:exon
subclass of: SO_0000010

position:4360:1
position: 4360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5892:1
position: 5892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4360-5892:1:exon

VRUMOI_RS18750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001048895.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipase D-like domain-containing protein
translation: MNLIEKFTKTETKIVDQSNTKLPPVLLPVLPKQVSDPQPINSSLFCNELQSRVVELIDNAEHSVILSTFLLADESVESAVLKAAKRKVRVYILLACETRLDGDVPDDDFGKKCLVQHKEMLNKLSGHVHFASAPHFHAKAVVIDALHETGNAKGLLLTANLTEEALLRNEELGVSLSRDQIADIVKVFRWAIFESAQHHMTSRGEFSAYKSPGNVGYPRGLTEILVTSSEDALIREHALALINKADKELIISSFGWQEDHQLVKAICERAKLGVKVTVLSRQRPAAMPALLAMKQAGVSVMCFKWLHAKAIVVDGTHGMVMSANFQTHGMDQGFELGVKLNGTQVIELMNCLEVFLTNSHNELHMDMSLGMTSGGFEAWENNIFKRYSVSEVDIVELSPIKADCLSDMDKHPKIPNANWREKTSHKIEYKWRIEPPVITNASPEYFKPLSAKDETSKKQESGSPRESYEPKVVRLTKKQLAITVSQESELAMATRLKQSELPNARIVLEA
SIO_010081: VRUMOI_RS18750
subclass of: SO_0000673
so part of: VRUMOI_RS18750
location: 4360..5892
location: region:4360-5892:1
so has part: feature:4360-5892:1:exon

WP_089138968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4360-5892:1:exon

VRUMOI_RS18755
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18755
so part of: sequence
location: 5895..7340
location: region:5895-7340:1
so has part: feature:5895-7340:1:exon
subclass of: SO_0000010

position:5895:1
position: 5895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7340:1
position: 7340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5895-7340:1:exon

VRUMOI_RS18755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000369162.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma 54-interacting transcriptional regulator
translation: MDFKNTLLCWHSKRAGVEVLDEALKRFKNRKVHIDKVIVLTQSAGDSSLYKDHEFGDLQISFRTVGLENPADHNEIYHIIESEIIPELKLEQHLHINVSPGTPAMHAVWLILHARGHFPRETILWSSQYNPDTKRTSIAKVDFSINTYLAEISAISSSEGGYALYDLDPKSKPRQDALQTLKQFSCVPTAPLLVLGERGTGKTRLIETVVGKVKQKQVVTLACGGLDSQVVDSMLFGHVKGAFTGAEKDRNGLLKEANGKVLFLDEIQDLPTSVQRKLVRVLQDNHHSFRPVGSDIEEVSDFELVCASNKSLEQLATILDADFFDRVSMLTITIPPLRACREDILSDWQRIWQEVNVNPNLPAEAPVSNQLIQFFNSAYLPGNLRDLKKLAYMSCAFLSSQTIESAISSSLASLDEPVLQGDSPDTRFAFGDLSKTTKDELTKAFHKEFATAAKKQFGTWVKAGEVLKVDQKTLQKYMRES
SIO_010081: VRUMOI_RS18755
subclass of: SO_0000673
so part of: VRUMOI_RS18755
location: 5895..7340
location: region:5895-7340:1
so has part: feature:5895-7340:1:exon

WP_089138969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5895-7340:1:exon

VRUMOI_RS19340
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19340
so part of: sequence
location: 7553..7702
location: region:7553-7702:1
so has part: feature:7553-7702:1:exon
subclass of: SO_0000010

position:7553:1
position: 7553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7702:1
position: 7702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7553-7702:1:exon

VRUMOI_RS19340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19340
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTFMYFIAAFALIGLAAYYNVDRIEEWGEKHLGIKKRLRNKTCCVLSRD
SIO_010081: VRUMOI_RS19340
subclass of: SO_0000673
so part of: VRUMOI_RS19340
location: 7553..7702
location: region:7553-7702:1
so has part: feature:7553-7702:1:exon

WP_162598465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7553-7702:1:exon

VRUMOI_RS18760
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18760
pseudo: true
so part of: sequence
location: complement(<8480..9168)
location: region:8480-9168:-1
so has part: feature:8480-9168:-1:exon
subclass of: SO_0000010

position:8480:-1
position: 8480
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:9168:-1
position: 9168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8480-9168:-1:exon

VRUMOI_RS18760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611500.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: VRUMOI_RS18760
subclass of: SO_0000673
so part of: VRUMOI_RS18760
location: complement(<8480..9168)
location: region:8480-9168:-1
so has part: feature:8480-9168:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8480-9168:-1:exon

VRUMOI_RS18770
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18770
so part of: sequence
location: 9654..12497
location: region:9654-12497:1
so has part: feature:9654-12497:1:exon
subclass of: SO_0000010

position:9654:1
position: 9654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12497:1
position: 12497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9654-12497:1:exon

VRUMOI_RS18770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18770
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAASNQFKAKLVSDMPQAYIDKYVPRDGYPITQKNKAKIIWVCQCCNSPFNCSFDNLTNIPNPDSPPERCPICRIAQRLCARFVQTQHAANWEILSHKEDETNEPDAKGRAPIYLLRHLACGESKRIKHSSIKALLAPSQSVNGTSLLDCEFCAAKAAECKAEPLKLESGRIAAELEALSREIWGQRASVRPSSEQGQFHITVNAIEGERLDRIAYTNVVVPMGRLKGPLNDLMSEAQLRSLIKDDLRMKELVAEVAEDASNFGALLKYVAYQGRESQRYKGSGDFDGLPAKSGLYFCYIKATGHLSNWQAYHRLKKTNYTLTTQKRSQLLTLVVLKHMFPADASGEAFEWRQDVRGLMDAFDQGLNGREIDIVSEPILLPNGQYKQIWAEYQGFQSHNDCEETKKIDRLKREACFDAGQPLLVVSKMKALSAKQAIHVCKKALEDWGANHPDLADQLRLLYRTPKIADVGDYFCNADRIQTQELTHRLHKVMTDNGRSLVSGQEGRLFLQSGTIKFTCHRCEKESETSVKNMLSLEFRKTEGCEKCRGITTQVRAATVREEKYQQFLSPELRAKIHPDILKQLLQGAIKENIFCPRCDNISETPSTFTRVIERLEAESGFICGYCLTRIEPNTPRILPGNFISEQNVLTSARQWQRTIREIITLVGWGEPDHWYQFVRHDRENTKSSNLLLELTCEHGHVQIDSFEGWRRRAKAIAIGHHRSACRVCSPETQTSAEYKAQISRDSRIERFRTIHPQFKIIFASNNELTVNCGQTSQIGRFQIPHPDFLVYETKINNYLEQYAKHGRCRCLICAAAQGGKLPDTEKNLASLDARLKLRAAWVADFLGYSSIDSARAYASTDVPPTVKIKSGEKIYFQCHNPEHKPVFTGAGNFFNPKRLGYCPKCMKEVKAKLKFDGVSQEPKTWESFCSRLSYYCTHEGREGIAPY
SIO_010081: VRUMOI_RS18770
subclass of: SO_0000673
so part of: VRUMOI_RS18770
location: 9654..12497
location: region:9654-12497:1
so has part: feature:9654-12497:1:exon

WP_089138971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9654-12497:1:exon

VRUMOI_RS18775
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18775
pseudo: true
so part of: sequence
location: <12491..>12637
location: region:12491-12637:1
so has part: feature:12491-12637:1:exon
subclass of: SO_0000010

position:12491:1
position: 12491
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:12637:1
position: 12637
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12491-12637:1:exon

VRUMOI_RS18775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010320052.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA-binding protein
SIO_010081: VRUMOI_RS18775
subclass of: SO_0000673
so part of: VRUMOI_RS18775
location: <12491..>12637
location: region:12491-12637:1
so has part: feature:12491-12637:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12491-12637:1:exon

VRUMOI_RS18780
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18780
so part of: sequence
location: 13313..13657
location: region:13313-13657:1
so has part: feature:13313-13657:1:exon
subclass of: SO_0000010

position:13313:1
position: 13313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13657:1
position: 13657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13313-13657:1:exon

VRUMOI_RS18780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020820691.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGLKESLTSIAIESWRFSKVFERMLEKIEPHEKGRYSNQYKWFQKKLNESLNQANLRLVNLEGQVYDIGMAVTAINIEDFDVEDELIIEQMIEPLIMNEDGIVKPGTVILRKA
SIO_010081: VRUMOI_RS18780
subclass of: SO_0000673
so part of: VRUMOI_RS18780
location: 13313..13657
location: region:13313-13657:1
so has part: feature:13313-13657:1:exon

WP_089138972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13313-13657:1:exon

VRUMOI_RS18785
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18785
so part of: sequence
location: 13659..16157
location: region:13659-16157:1
so has part: feature:13659-16157:1:exon
subclass of: SO_0000010

position:13659:1
position: 13659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16157:1
position: 16157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13659-16157:1:exon

VRUMOI_RS18785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007293166.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp70 family protein
translation: MKHFIGIDLGTTNSAIASFDGVNTRIWKSPIQTDVTPSAIYIDRRGRKLVGQTAYEQAARSPDNAAVLFKRLMGTSNNLQFKAMGESKTPVECSAEVLKTLFGYLTEEIRENKDTGVVITVPAAFNQMQKDATMESASLAGFDNVALMQEPVAAVMSVMKNNSSDGVFLIYDLGGGTLDIAIAESHSGKVNLLSHGGIAMCGGRDFDREILDNIVRPWLHDTFELPDDFVANPNYKTLIRMANHAVERAKIELSSREESIISLTETEARTKDLSGEEIYIDIELTRDMFNTLIEKRVNASIEAAREALSKAHLTPDYINKVAFVGGPTNYKPLRDKVCFELGIEGDNDINPMTAVAEGASIFAESIDWSSQDRSRKSSRGKLSLEGGVNLSFNFHARTPKNMARVLVQLSDSQAQDELEFQVDCIHTGWTSGLLKLTHGAAVNLPLNQMGDNLFKVFVFDNQGKSVDIGQDVITITKTAASVEAIPASHTISIEALNQLGGSSGLVHLVKAGDTLPVKGSANFKAAESLRAGTIASINIKLWEGDIKEPISDNRPIGVLKISGTDFEQGVIPAGADIECEYEILDSGAIKLEVSVPSIGSVFDSGKNFYSRQEGQVDYTSSLELVKSEGELLISRIEELETVIDSDVLQTAKSKAEVAKNLDANTQQAEDTQEAMEQIYEAKKLLSKARDANLPQIRQVEINGLEGFYNDHLYALASESDRSLISRLFSTARNSLSSRNGDFENIIEEIRGKNFKILWNQDWFVVEKFKSMATSAHLFSDKNMFDRLVSEGVDRLEHDDINGVREIVLQLSQIQIGMISDNEILANANIVMG
SIO_010081: VRUMOI_RS18785
subclass of: SO_0000673
so part of: VRUMOI_RS18785
location: 13659..16157
location: region:13659-16157:1
so has part: feature:13659-16157:1:exon

WP_089138973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13659-16157:1:exon

VRUMOI_RS18790
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18790
so part of: sequence
location: 16161..17513
location: region:16161-17513:1
so has part: feature:16161-17513:1:exon
subclass of: SO_0000010

position:16161:1
position: 16161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17513:1
position: 17513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16161-17513:1:exon

VRUMOI_RS18790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18790
inference: COORDINATES: protein motif:HMM:NF012234.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MNELYLPSGYNLPSGHKVTKKLQSGVGWQIFVTSNKSRLLVITGQLVRNNFNNDILSEKSFTSCYIGKELLYLYESEPRYELSHIKYSNVPKDFSEAISFAYAFDATRKIISEIDLSNSIYIEKLSRLLVIGEFTKVTITDDLVLGRWLSGGVSLSAKNIERIKSLSGIGDIGLLNEILLKSGVVKESISLAERDNNFHLIGRSQLQQFLIDHVIDIIENPIFYDKLDIDFPTPFILYGPPGCGKTYAIEQLINYLSLPCFYIESSTVGSPYIHETSRRIAEVFGDAIKQSPSVIVIDEMESFVSCRSNVDAGQYHVEEVNEFLRLIPKAIDNKVLIIGMTNQLNIIDSAIIRKGRFDFCIEVNTPTKREIEELFDHLVFSLPCDLEQGKGDIYDGLYGRQPSDVDFVVKEAKRIAARRRCSLLTTDCFIMAIDKLPELNGKNNNKIGFI
SIO_010081: VRUMOI_RS18790
subclass of: SO_0000673
so part of: VRUMOI_RS18790
location: 16161..17513
location: region:16161-17513:1
so has part: feature:16161-17513:1:exon

WP_089138974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16161-17513:1:exon

VRUMOI_RS18795
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18795
so part of: sequence
location: 17515..19134
location: region:17515-19134:1
so has part: feature:17515-19134:1:exon
subclass of: SO_0000010

position:17515:1
position: 17515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19134:1
position: 19134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17515-19134:1:exon

VRUMOI_RS18795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18795
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNITENPFNLLNASVRDDKSTLIDLAEDYSLVNDDDLGGKYVNDLTSPRRRLSIEISWLLGISENVIKNLINNIDDVEFIISSNGFNALSRANLLASSIERLSKIDKELSIKLITELSKMSESIFSDEIKVLINQERKYSSLLMVESLEDIESELENRKKYYKKASINLLDCFSSSEIVEIITKIIVTETNNGSKYCGELIQEVIGYYELKAQQFLKEEEGNIDILLSTIDDNLKDGLSESVMSIYIEELINVLKNWDLIAQPIQILYMSKGLKHEMSNNLAYKIRNLSLKLFNEYDYVKLTQRLGYTLQQVFEEDFEFKEKADQDLSDINDILHDRELSEEDREKFSKAITYEVEIGMAFKNRFTITPDIIEWKNTITKITDIQYIRWGALSSNSGTEYFIAFGHKDLTQEIKLRKKTIFSEIIDRLMKTAGIHILAKYMEAFKNDENISIGGVIVNDYGVQLRKSKMFSKDESEFVAWHNVEVFSRNGNFVINKIGNRKMNCALPYLNVNNVHILEAIIRMKFKKPGVRLSDALISN
SIO_010081: VRUMOI_RS18795
subclass of: SO_0000673
so part of: VRUMOI_RS18795
location: 17515..19134
location: region:17515-19134:1
so has part: feature:17515-19134:1:exon

WP_089138975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17515-19134:1:exon

VRUMOI_RS19565
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19565
so part of: sequence
location: 19145..19996
location: region:19145-19996:1
so has part: feature:19145-19996:1:exon
subclass of: SO_0000010

position:19145:1
position: 19145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19996:1
position: 19996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19145-19996:1:exon

VRUMOI_RS19565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19565
inference: COORDINATES: protein motif:HMM:NF013625.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidoglycan-binding domain-containing protein
translation: MNNNKPMGFNGISSLVSKLDLTSIDLKKESLNGTSSSNDTSYTNSTTSNVKKGTTENKSKENNGINPWFWFFVLLLILGAMFLAEEYDNTNDYSKNENRVPETKITPTTKKENNTNSKLMVFSMPSPGTNNVLVVSELRWCLREQIILNTYDSEVNFNQASEVIIEKYNQLVNRYNTRCGSYRYYEGQLTKAKIEILAIKDDIQQSTLNKINPLNMNNYNVDLTKYDVLDVQSALKMRGYDVGTVDGIMGNRTRNAIKQFQRDYYLKVDGEISPKLLEYLQIR
SIO_010081: VRUMOI_RS19565
subclass of: SO_0000673
so part of: VRUMOI_RS19565
location: 19145..19996
location: region:19145-19996:1
so has part: feature:19145-19996:1:exon

WP_231897582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19145-19996:1:exon

VRUMOI_RS18805
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18805
so part of: sequence
location: complement(20037..20846)
location: region:20037-20846:-1
so has part: feature:20037-20846:-1:exon
subclass of: SO_0000010

position:20037:-1
position: 20037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20846:-1
position: 20846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20037-20846:-1:exon

VRUMOI_RS18805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18805
inference: COORDINATES: protein motif:HMM:NF023166.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RsiV family protein
translation: MEHLLKSIGFTFLVLLSGSALSDEKVSNVETDFALDKTVIVSKSEINEPHTIHKIKLKYYDMDYYGNNSRFSGAYLKRDDINAFLGKDINSIKGDFFKNYPSGKKFINEFQLYEGFIQDYDESIEAATKNYISFSISQYESTGGAHGVTYTNYINYDFNNNEIITWEDMFDNNYEVNNYIHNLVFSFFNENDLDNKSEGINLFMQVGRFNITPKGLSIHYPSYSIAPYAYGQPHFFISKEKLKKFMAKSKYQYYFSKNPKLNVTITYIL
SIO_010081: VRUMOI_RS18805
subclass of: SO_0000673
so part of: VRUMOI_RS18805
location: complement(20037..20846)
location: region:20037-20846:-1
so has part: feature:20037-20846:-1:exon

WP_162598466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20037-20846:-1:exon

VRUMOI_RS18810
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18810
so part of: sequence
location: 22121..23182
location: region:22121-23182:1
so has part: feature:22121-23182:1:exon
subclass of: SO_0000010

position:22121:1
position: 22121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23182:1
position: 23182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22121-23182:1:exon

VRUMOI_RS18810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18810
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MKDLMTLPSDLDSIRPQQLVQYLSSNSSKAIDHEKVQQLILHFQNQFYSRQGQYSDSTLRRLKSAWAMFVTWCNENGRQSLPSSPDTVEDYLKSTNKSLRGNTLKVNLWAISKTHKISGCPDPTKDIYVEGQLKQIIRNKKYSGESPNQATAFNEFHLNQVIDLWGTSSSPMQKRDLMVLGLAYESLLRESEIVRIKFKHINWSQDGSALITIPYTKTNQLGSDEVVYVSKQVTGFIRKYLAINDLEKQDDSFLIQGFTKSGNIKQQLSPKAVTPKTIERIFAKTAAILGLEDMGLRKFTGHSARVGAAQDLLRDGYTTLQVQQSGRWSTERMVLHYGKGILAADSAMARKRR
SIO_010081: VRUMOI_RS18810
subclass of: SO_0000673
so part of: VRUMOI_RS18810
location: 22121..23182
location: region:22121-23182:1
so has part: feature:22121-23182:1:exon

WP_089138977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22121-23182:1:exon

VRUMOI_RS18815
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18815
so part of: sequence
location: 23575..23832
location: region:23575-23832:1
so has part: feature:23575-23832:1:exon
subclass of: SO_0000010

position:23575:1
position: 23575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23832:1
position: 23832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23575-23832:1:exon

VRUMOI_RS18815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019280871.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin
translation: MNLTNNILTDVSAGLTQLKNNPMGVLEEGHGAPVAILNRNKPAFYAVPAALYEKMVDELENIELMKMAQEAYETGEFVEVDLDSL
SIO_010081: VRUMOI_RS18815
subclass of: SO_0000673
so part of: VRUMOI_RS18815
location: 23575..23832
location: region:23575-23832:1
so has part: feature:23575-23832:1:exon

WP_027695182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23575-23832:1:exon

VRUMOI_RS18820
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18820
so part of: sequence
location: 23819..24115
location: region:23819-24115:1
so has part: feature:23819-24115:1:exon
subclass of: SO_0000010

position:23819:1
position: 23819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24115:1
position: 24115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23819-24115:1:exon

VRUMOI_RS18820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004394065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MTVYKLKFERKAQKLFSKLGEPVKSQFKEKLKKIQVNPHIEANKLHGGLSGCYKIKLKQSGYRLVYKVVDDELIVLILAVGKREKKEAYLMAQRLLNK
SIO_010081: VRUMOI_RS18820
subclass of: SO_0000673
so part of: VRUMOI_RS18820
location: 23819..24115
location: region:23819-24115:1
so has part: feature:23819-24115:1:exon

WP_027695183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23819-24115:1:exon

VRUMOI_RS18825
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
gene: ltrA
locus tag: VRUMOI_RS18825
so part of: sequence
location: complement(24586..25755)
location: region:24586-25755:-1
so has part: feature:24586-25755:-1:exon
subclass of: SO_0000010

position:24586:-1
position: 24586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25755:-1
position: 25755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24586-25755:-1:exon

VRUMOI_RS18825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
gene: ltrA
locus tag: VRUMOI_RS18825
EC number: 2.7.7.49
inference: COORDINATES: protein motif:HMM:TIGR04416.1
GO function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0000373 - Group II intron splicing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron reverse transcriptase/maturase
translation: MCKANKGAAGVDGVRFEDLNSIETSGKLIKTLRAELVEGRYRPLPVKRVQIPKDNGKTRNLGIPSIRDRIVQMACTLVLSPVFEPHFHCNSYGYRPKRSAQDAVICINGYLKQGYQQVYDADLSKFFDTIPHSRLLDKVRSKVTDRAVLRLIKLFLKAPISEPTAKGKSRIVGNPIGTPQGGVISPLLANIYLNDFCRKIATKTPCKIISYADDFVILSKTPFNSAQQDWIKNELEQEGLKLNEDKTHIVDMTQVGNEFDFLGFTFKYIVGFIQHTNYVKIYPSKKSQKKYKDKLRSIVKHRTSLTLDQLVERVNRVVIGWKNYFGKVGYPRQVFFKMDWFLVARFYRWSRSRSQRRSLYLAQDAWDKLHKAGLVYLQPTKMKTAKVSR
SIO_010081: VRUMOI_RS18825
subclass of: SO_0000673
so part of: VRUMOI_RS18825
location: complement(24586..25755)
location: region:24586-25755:-1
so has part: feature:24586-25755:-1:exon

WP_162598467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24586-25755:-1:exon

VRUMOI_RS18830
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18830
so part of: sequence
location: 26117..26725
location: region:26117-26725:1
so has part: feature:26117-26725:1:exon
subclass of: SO_0000010

position:26117:1
position: 26117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26725:1
position: 26725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26117-26725:1:exon

VRUMOI_RS18830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003029810.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MYIFGYLRASAHDQDASRAQQRLKAFALEHNHRVAGWYVENASGASLQRPELMRLLNDAEKGDLILIEQVDRLSRLDDEGWQQLKRMMQEKNLAIISLDLPTSYAALMPHGSDEFTRSMLTAINSMMLDMLAAIARKDYTDRRRRQQEGVKKAKEKGVYRGRIPDQNKHDLIRSLRHQGKSISETARLAGVSERTVTRVSKS
SIO_010081: VRUMOI_RS18830
subclass of: SO_0000673
so part of: VRUMOI_RS18830
location: 26117..26725
location: region:26117-26725:1
so has part: feature:26117-26725:1:exon

WP_040223437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26117-26725:1:exon

VRUMOI_RS18835
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18835
so part of: sequence
location: complement(26722..26907)
location: region:26722-26907:-1
so has part: feature:26722-26907:-1:exon
subclass of: SO_0000010

position:26722:-1
position: 26722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26907:-1
position: 26907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26722-26907:-1:exon

VRUMOI_RS18835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18835
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006118530.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix domain-containing protein
translation: MAEPYLKNRRRFTSSLDNQLVPLFDALAAKTRIPKSRLLDEAIEDLLVKHGVPGKKVDSQN
SIO_010081: VRUMOI_RS18835
subclass of: SO_0000673
so part of: VRUMOI_RS18835
location: complement(26722..26907)
location: region:26722-26907:-1
so has part: feature:26722-26907:-1:exon

WP_024562121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26722-26907:-1:exon

VRUMOI_RS18840
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18840
so part of: sequence
location: complement(27384..28388)
location: region:27384-28388:-1
so has part: feature:27384-28388:-1:exon
subclass of: SO_0000010

position:27384:-1
position: 27384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28388:-1
position: 28388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27384-28388:-1:exon

VRUMOI_RS18840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18840
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229637.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110-like element IS5075 family transposase
translation: MENIALIGIDLGKNSFHIHCQDHRGKAVYRKKFTRPKLIEFLATCPATTIAMEACGGSHFMARKLAELGHFPKLISPQFVRPFVKSNKNDFVDAEAICEAASRPSMRFVQPRTESQQAMRALHRVRESLVQDKVKTTNQMHAFLLEFGISVPRGAAVISRLSTLLEDSSLPLYLSQLLLKLQQHYHYLVEQIKDLESQLKRKLDEDEVGQRLLSIPCVGTLTASTISTEIGDGKQYASSRDFAAATGLVPRQYSTGGRTTLLGISKRGNKKIRTLLVQCARVFIQKLEHQSGKLADWVRELLCRKSNFVVTCALANKLARIAWALTARQQTYEA
SIO_010081: VRUMOI_RS18840
subclass of: SO_0000673
so part of: VRUMOI_RS18840
location: complement(27384..28388)
location: region:27384-28388:-1
so has part: feature:27384-28388:-1:exon

WP_000427614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27384-28388:-1:exon

VRUMOI_RS18845
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18845
pseudo: true
so part of: sequence
location: complement(28467..>29975)
location: region:28467-29975:-1
so has part: feature:28467-29975:-1:exon
subclass of: SO_0000010

position:28467:-1
position: 28467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29975:-1
position: 29975
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28467-29975:-1:exon

VRUMOI_RS18845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18845
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014834018.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3-like element ISPa38 family transposase
SIO_010081: VRUMOI_RS18845
subclass of: SO_0000673
so part of: VRUMOI_RS18845
location: complement(28467..>29975)
location: region:28467-29975:-1
so has part: feature:28467-29975:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28467-29975:-1:exon

VRUMOI_RS18850
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18850
so part of: sequence
location: complement(30228..30788)
location: region:30228-30788:-1
so has part: feature:30228-30788:-1:exon
subclass of: SO_0000010

position:30228:-1
position: 30228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30788:-1
position: 30788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30228-30788:-1:exon

VRUMOI_RS18850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001097412.1
GO function: GO:0020037 - heme binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chlorite dismutase family protein
translation: MDTRLFAFVGGDSGLWRIVGTETIVGKSLPEAKRLNVISASELQPETNAPWVLRGITSNERYVMREEKNEIVVKQQGLARPEATCAALIPIRKNAAWWEFTQDERRSVFEKSKHIQIGLNYLPAVARKLHHCRDLSENEPFDFLNWFEFAPTHEAEFNALLSELRATEEWKYVDREVDIRLVREAA
SIO_010081: VRUMOI_RS18850
subclass of: SO_0000673
so part of: VRUMOI_RS18850
location: complement(30228..30788)
location: region:30228-30788:-1
so has part: feature:30228-30788:-1:exon

WP_002718009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30228-30788:-1:exon

VRUMOI_RS18855
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18855
pseudo: true
so part of: sequence
location: complement(<31166..31603)
location: region:31166-31603:-1
so has part: feature:31166-31603:-1:exon
subclass of: SO_0000010

position:31166:-1
position: 31166
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:31603:-1
position: 31603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31166-31603:-1:exon

VRUMOI_RS18855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014834018.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF4158 domain-containing protein
SIO_010081: VRUMOI_RS18855
subclass of: SO_0000673
so part of: VRUMOI_RS18855
location: complement(<31166..31603)
location: region:31166-31603:-1
so has part: feature:31166-31603:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31166-31603:-1:exon

VRUMOI_RS18860
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18860
so part of: sequence
location: 31762..32052
location: region:31762-32052:1
so has part: feature:31762-32052:1:exon
subclass of: SO_0000010

position:31762:1
position: 31762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32052:1
position: 32052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31762-32052:1:exon

VRUMOI_RS18860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001247892.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase
translation: MRPSVVLDMKRSAVREAVGRFRAANPRVFGSVLHGTDRDGSDLDLLVDALPGATLLDLGDLEEELKSLLGVDVDLLTPGDLPPKFRAKVLAEAQPI
SIO_010081: VRUMOI_RS18860
subclass of: SO_0000673
so part of: VRUMOI_RS18860
location: 31762..32052
location: region:31762-32052:1
so has part: feature:31762-32052:1:exon

WP_001247892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31762-32052:1:exon

VRUMOI_RS18865
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18865
so part of: sequence
location: 32049..32450
location: region:32049-32450:1
so has part: feature:32049-32450:1:exon
subclass of: SO_0000010

position:32049:1
position: 32049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32450:1
position: 32450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32049-32450:1:exon

VRUMOI_RS18865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001293886.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF86 domain-containing protein
translation: MSENRLPDYLDHIQQAATDARSFVEGMAKDDFLADKRTQQAVIMSLIVIGEAATKVMDGYVEFTQAHADVPWRSMRNMRNRMAHGYFDINLDVVWETVQEWLPALLQQLPAVRQDADDEDRNDNCERGISDDC
SIO_010081: VRUMOI_RS18865
subclass of: SO_0000673
so part of: VRUMOI_RS18865
location: 32049..32450
location: region:32049-32450:1
so has part: feature:32049-32450:1:exon

WP_001293886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32049-32450:1:exon

VRUMOI_RS18870
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18870
so part of: sequence
location: 32440..32796
location: region:32440-32796:1
so has part: feature:32440-32796:1:exon
subclass of: SO_0000010

position:32440:1
position: 32440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32796:1
position: 32796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32440-32796:1:exon

VRUMOI_RS18870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003465043.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MTVESRIFSVAEYVQPSEGEPIRSVVLETRDSIIVVWHVHPGQEIAAHIHPHGQDTWTVLSGMADYFQGNGIVRALREGEIAVARPGQVHGARNTGTEPFVLVSVVASANAGFVLAER
SIO_010081: VRUMOI_RS18870
subclass of: SO_0000673
so part of: VRUMOI_RS18870
location: 32440..32796
location: region:32440-32796:1
so has part: feature:32440-32796:1:exon

WP_000215515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32440-32796:1:exon

VRUMOI_RS18875
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18875
so part of: sequence
location: 33051..33377
location: region:33051-33377:1
so has part: feature:33051-33377:1:exon
subclass of: SO_0000010

position:33051:1
position: 33051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33377:1
position: 33377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33051-33377:1:exon

VRUMOI_RS18875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011809177.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRSRRKTPIVGHTTCGSEREDKKLWHQRWRTRERTALTSASPEALSAHLPLLENQASSVWSMGKDGRSYWPVKRQAATADRIANHKGRNPQERASLKKRLLRKWMSK
SIO_010081: VRUMOI_RS18875
subclass of: SO_0000673
so part of: VRUMOI_RS18875
location: 33051..33377
location: region:33051-33377:1
so has part: feature:33051-33377:1:exon

WP_003100858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33051-33377:1:exon

VRUMOI_RS18880
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18880
so part of: sequence
location: 33374..33874
location: region:33374-33874:1
so has part: feature:33374-33874:1:exon
subclass of: SO_0000010

position:33374:1
position: 33374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33874:1
position: 33874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33374-33874:1:exon

VRUMOI_RS18880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003100856.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLSFHQHIALFWMIGAPGVFAPVIENAKRPDAGAVMAWGVAIVAVMILFTPLLLRCPPFRRWYGRTDALSERQRQALAERGLRRYYQTAFDDGYVPRVMPYVWRIIWTVGGLMAVTAVLPTNTGRPAFDALVVFSTWYPIGVMLLVFASRPLGRLIRQRAQERRK
SIO_010081: VRUMOI_RS18880
subclass of: SO_0000673
so part of: VRUMOI_RS18880
location: 33374..33874
location: region:33374-33874:1
so has part: feature:33374-33874:1:exon

WP_003100856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33374-33874:1:exon

VRUMOI_RS18885
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18885
so part of: sequence
location: 33871..34242
location: region:33871-34242:1
so has part: feature:33871-34242:1:exon
subclass of: SO_0000010

position:33871:1
position: 33871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34242:1
position: 34242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33871-34242:1:exon

VRUMOI_RS18885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003100853.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTSTIEALASAWARIAEEAEFPADYEGTATPQAHRASEAIQEQIRERIVATNDMRLFSLLHLLGQASLRMEQALWPEDYERMTREVEEALRQATDANARSYTHEEVMQAMQERIDRARDKPC
SIO_010081: VRUMOI_RS18885
subclass of: SO_0000673
so part of: VRUMOI_RS18885
location: 33871..34242
location: region:33871-34242:1
so has part: feature:33871-34242:1:exon

WP_003100853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33871-34242:1:exon

VRUMOI_RS18890
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18890
so part of: sequence
location: 34236..34793
location: region:34236-34793:1
so has part: feature:34236-34793:1:exon
subclass of: SO_0000010

position:34236:1
position: 34236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34793:1
position: 34793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34236-34793:1:exon

VRUMOI_RS18890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019897068.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLIGYARVSTQDQNLELQREALSKAGCKKVFEDKVSGTRADRPGLAKTLEMLREGDTLVVWKLDRLGRSVKQLVDLVGDLHKHGVQFRSLTDSIDTGTPSGRFFFHVMASLAEMERELTVERTRAGLEVAKQLGRKGGRKPKMTDSKIESAKKLLASGVPPKDVAKNLGVSIPTLYRWVPASTHA
SIO_010081: VRUMOI_RS18890
subclass of: SO_0000673
so part of: VRUMOI_RS18890
location: 34236..34793
location: region:34236-34793:1
so has part: feature:34236-34793:1:exon

WP_003100847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34236-34793:1:exon

VRUMOI_RS18895
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18895
so part of: sequence
location: 34872..35876
location: region:34872-35876:1
so has part: feature:34872-35876:1:exon
subclass of: SO_0000010

position:34872:1
position: 34872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35876:1
position: 35876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34872-35876:1:exon

VRUMOI_RS18895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18895
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229637.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110-like element IS5075 family transposase
translation: MENIALIGIDLGKNSFHIHCQDHRGKAVYRKKFTRPKLIEFLATCPATTIAMEACGGSHFMARKLAELGHFPKLISPQFVRPFVKSNKNDFVDAEAICEAASRPSMRFVQPRTESQQAMRALHRVRESLVQDKVKTTNQMHAFLLEFGISVPRGAAVISRLSTLLEDSSLPLYLSQLLLKLQQHYHYLVEQIKDLESQLKRKLDEDEVGQRLLSIPCVGTLTASTISTEIGDGKQYASSRDFAAATGLVPRQYSTGGRTTLLGISKRGNKKIRTLLVQCARVFIQKLEHQSGKLADWVRDLLCRKSNFVVTCALANKLARIAWALTARQQTYVA
SIO_010081: VRUMOI_RS18895
subclass of: SO_0000673
so part of: VRUMOI_RS18895
location: 34872..35876
location: region:34872-35876:1
so has part: feature:34872-35876:1:exon

WP_032426534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34872-35876:1:exon

VRUMOI_RS18900
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18900
so part of: sequence
location: complement(36244..36552)
location: region:36244-36552:-1
so has part: feature:36244-36552:-1:exon
subclass of: SO_0000010

position:36244:-1
position: 36244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36552:-1
position: 36552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36244-36552:-1:exon

VRUMOI_RS18900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001452736.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLIPAIIAAALLSGCATQNDAVALSNRISDQQKQINALSVRLQSAEHRLSQQESAFRSEQTQNSSYCYLNGVKYSQGSVFAGRICDGSSGSVAWRLYSHR
SIO_010081: VRUMOI_RS18900
subclass of: SO_0000673
so part of: VRUMOI_RS18900
location: complement(36244..36552)
location: region:36244-36552:-1
so has part: feature:36244-36552:-1:exon

WP_000733764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36244-36552:-1:exon

VRUMOI_RS18905
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18905
so part of: sequence
location: complement(36556..36894)
location: region:36556-36894:-1
so has part: feature:36556-36894:-1:exon
subclass of: SO_0000010

position:36556:-1
position: 36556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36894:-1
position: 36894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36556-36894:-1:exon

VRUMOI_RS18905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18905
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKLRTVAKILLMYCIFSSASAFAEGNTKGDPCLAFTCMAGKLQGNEATSGPDCVMGRQSFFEIRIYTPYYNPGATAAARKVFLSTCPMTTISENKNTLELIIQRYGRSFQE
SIO_010081: VRUMOI_RS18905
subclass of: SO_0000673
so part of: VRUMOI_RS18905
location: complement(36556..36894)
location: region:36556-36894:-1
so has part: feature:36556-36894:-1:exon

WP_000040982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36556-36894:-1:exon

VRUMOI_RS18915
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18915
so part of: sequence
location: complement(37409..40387)
location: region:37409-40387:-1
so has part: feature:37409-40387:-1:exon
subclass of: SO_0000010

position:37409:-1
position: 37409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40387:-1
position: 40387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37409-40387:-1:exon

VRUMOI_RS18915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006991878.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3-like element ISShfr9 family transposase
translation: MAIKNEITILTRAEQANLYSPPIFSIEEQRLYFSLNDAELAVFRSIRLRAHRCYFVAILGYFKSKPVILDIAYSQVSKDLMFISKELLGGKGLRPFTPSQKQKDRLYAKVLDLAGYHKWDESQHFNSLFDHLVQVGNAWLEPRYLFDTAIEFLTSHSIAIPRYTVLQRLISRAMQQVRKDLAHQLNQLTSPELHVFLDSITAIDDGLSLNQLRGGAKSLTVPELKKELALYHQLAPWRTQINGVIDGLNLSLKNRQHFGELINYYGSKLKRFKRAQQHLWLLCHLTERIQLALERLTDGFIYHIRKQQEAANTFAQQAVFLSWQSAADNVTKAAELLHLFVDENIDDNQPFSVVRQQALKVMNDRDIQTLCLYLKKQKRTVEEYQWQHYDEQCNLLEQLLRQVFLCLECEAGKGSEAVVAQLQQMQTEIAFGGPLKTMDTSLIPKKHLPWLVKQDNVNPQRYEWLLYRQLTSRLNGRIYLPNVTKYRALEDDLIPQTSQDTLLASSTLDRLKQPAELLLQEKQHRLESALKDVALHIDEGDNRNVIMKNRTGTRWRLPTKSATSLVNNPFFKRMQPVGIADVLRYVERETGFMKCLTHVLPIQKQGFTHQDDLLAILIANATHRGVYGMAQISDRSYEHLSTVQANYIRPETLHDASDVINNAVAALPIFRHYHIQEDQLHASADGQKFETHLETFKTRYSSKYFGTNKGITAMTLVANHSALNARIIGSNEHESHYIYDLLQSNSSEIKPDVLSTDTHGVNHVNFALLDLCGYSFAPRYAQFSSVINDLFDVTENEHGGTNLALKKPIRTNVIETGWQDIRRIVLSLQTKRTTQAMLVRKLSGYPSGHPTLQALTEYNRLVKAQYLLDYIDNASLRQYVQRALNRGEAWHFLRRAIASVNGDQFRGKNESEIAIWNECARLLANAIIYFNSAILSHLLGHFEARGDEEKAGITRAVSPVAWQNINLSGTYNFTNTGKLPNIGEITRPIVDD
SIO_010081: VRUMOI_RS18915
subclass of: SO_0000673
so part of: VRUMOI_RS18915
location: complement(37409..40387)
location: region:37409-40387:-1
so has part: feature:37409-40387:-1:exon

WP_014979375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37409-40387:-1:exon

VRUMOI_RS18925
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18925
so part of: sequence
location: complement(41308..42348)
location: region:41308-42348:-1
so has part: feature:41308-42348:-1:exon
subclass of: SO_0000010

position:41308:-1
position: 41308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42348:-1
position: 42348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41308-42348:-1:exon

VRUMOI_RS18925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017017030.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MEDNLLLAIDLAKNSFQVCYMRNNGEVLLNKAISRNSLIKLLTGKKRFSLVAMEACGGAHYWARLAKGNGHEVKIIQPRSVKGLQLKQKTDKNDAYAVGVAALLPHIFSCNLMSEDEQGLQCLDRARALQLAQRTALSNQMRGFLNEYGIVLPKGIAPLVKRIPEILEDAENGLPDSLRQVLASQADILAMQTEQIEYYDCLIAEHIKQNKICQKLSKLEGVGPIVALGLMIRLGDGKEFTHSRDASACIGLTPKQHSTGGKERIGHISKSCADKRLRSLLYQGAMSIVYKVTLRAPTTEKERWLKSIVERRGKKIAAIAMANKTVRTAVALIKSDSDYQPLPIQA
SIO_010081: VRUMOI_RS18925
subclass of: SO_0000673
so part of: VRUMOI_RS18925
location: complement(41308..42348)
location: region:41308-42348:-1
so has part: feature:41308-42348:-1:exon

WP_089139185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41308-42348:-1:exon

VRUMOI_RS18930
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
gene: ltrA
locus tag: VRUMOI_RS18930
so part of: sequence
location: 42660..44132
location: region:42660-44132:1
so has part: feature:42660-44132:1:exon
subclass of: SO_0000010

position:42660:1
position: 42660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44132:1
position: 44132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42660-44132:1:exon

VRUMOI_RS18930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
gene: ltrA
locus tag: VRUMOI_RS18930
EC number: 2.7.7.49
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004393986.1
GO function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0000373 - Group II intron splicing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron reverse transcriptase/maturase
translation: MISSHEVSAPSGSAQWQSIDWKAVERHVLRLQMRIAKAIREGKHGKAKALQWILTHSKAAKLLAVRRVSQNKGSKTPGIDGDIWNTDARRMAAVSLLSRKGYRAKPLRRIYIPKKNGKLRPLGIPCMIDRAQQALHLLALEPISETIADPNSYGFRPNRSAADAIQQCFKCLCKKGAAQWVLEGDIKACFDKIGHQWLLDNIPTDKRMLKQWLGCGYIDKGLFYKTAEGTPQGGIISPTLMLLTLVGLEKLTKSIARKTGSRVNFIGYADDFVITGSSKEVFVNDIKPQLMTFLQERGLTLSEEKTHVTHINDGFDFLGFNARKYKGKLLIKPSKSNVLSFLRNMRDVIRKHATIPVADLIKMMNPKLRGWANYYRHCVAKQTFGYVGHQVFLALWRWSVRRHPNKGRKWIAHKYFLNYQGQWIFHGWFKKDGLYGVIRLFQIGQVPIKRHVKIMSQANPFDPFWEGFLNERKVKNTGRNSWFEPVATAL
SIO_010081: VRUMOI_RS18930
subclass of: SO_0000673
so part of: VRUMOI_RS18930
location: 42660..44132
location: region:42660-44132:1
so has part: feature:42660-44132:1:exon

WP_089139186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42660-44132:1:exon

VRUMOI_RS18935
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18935
so part of: sequence
location: 44404..47322
location: region:44404-47322:1
so has part: feature:44404-47322:1:exon
subclass of: SO_0000010

position:44404:1
position: 44404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47322:1
position: 47322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44404-47322:1:exon

VRUMOI_RS18935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001138014.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MPRKTLFTLSERETLTAFPQEHHDLVRHYLFNDADLALINQRRGKHNRLGFAIQLCYLRYPGKPIPPDEEPPAHLLSFVSEQLGVPITHWKRYAIRKTTRREHLTELMNWLGMASFTLSHFRLSVQYLLKTSVQTESGMVLAKTLLDYLRTQKVVIPGMEVLERICAEAITLGTKRVYRALTSELSEGQKEQLDRLLLMRNQQSQTFINWLRQPHGFPNAKHVLKHIERIEYIQALSLPDGLEKMVHQNRLRKIAREGGQMTPQHLRDFEPLRRHATLAAVVLDTRATLIDELIDMHDRIMASKENVARRKHAEQFQSSGKQINEQLKVLSQAGRLIQKARESKSDPFDAIETSIGWQVFLDSIKSAEQLSQPEFDHLTLIIDAYPQLRRYTPAFLDALELKAAPVSQSLLDAVNVLRKLNLTKARKLPEDVPTDFIRKRWASLVFTEEEINKKYYELCVLSELKNALRSGDIWVRHSRQFMDFEDYLLPLDKYRALFSQQELGLDIETDGELFLEQKKNQLVTALKRVELHAADNNLPGTIVTASGMRITPLTNSVPDEAEKLIRKVSALMPKVKITELLLEVDRWTDFSRHFTHLKGGQPASDRVMLMTAVLADGINLGLTKMASSCPGTSYAKLSWLQAWHVRDDTYSKALAELTNAQHQHHFSQWWGDGTTSSSDGQRFNAGGRGESKGHFNAKYGSEPGSIFYTHISDHYAPFHTRIINSPARDATYVLDGLLNHESELNIEEHYTDTAGFTDHVFALMPILGFKFAPRIRDLSDKRLYIAGNKSDYPTLGGLIGGDVNFDYIALHWDDILRLSASIGKGVVTASLMLRKLGSYPRQNGLALALRELGRIERTLFTLEWMQDINLRRRVQAGLNKGEAKNALSRAVFFNRLGELRDRSFENQRYRASGLNLVVAAIILWNTEYISQALETLRSRGEIIDDALLSHLSPLGWEHINLTGDYIWPELDN
SIO_010081: VRUMOI_RS18935
subclass of: SO_0000673
so part of: VRUMOI_RS18935
location: 44404..47322
location: region:44404-47322:1
so has part: feature:44404-47322:1:exon

WP_089139187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44404-47322:1:exon

VRUMOI_RS18945
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18945
pseudo: true
so part of: sequence
location: complement(48136..>48867)
location: region:48136-48867:-1
so has part: feature:48136-48867:-1:exon
subclass of: SO_0000010

position:48136:-1
position: 48136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48867:-1
position: 48867
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48136-48867:-1:exon

VRUMOI_RS18945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011787758.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1634 family transposase
SIO_010081: VRUMOI_RS18945
subclass of: SO_0000673
so part of: VRUMOI_RS18945
location: complement(48136..>48867)
location: region:48136-48867:-1
so has part: feature:48136-48867:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48136-48867:-1:exon

VRUMOI_RS18950
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18950
so part of: sequence
location: complement(49053..50459)
location: region:49053-50459:-1
so has part: feature:49053-50459:-1:exon
subclass of: SO_0000010

position:49053:-1
position: 49053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50459:-1
position: 50459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49053-50459:-1:exon

VRUMOI_RS18950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001963166.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MNKKTLPPPPDFDSPEEAKDIIHFLWNKLAELEDRLNQNSRNSSVPSSQQPLHNKAKNTSPNRKKSGKKQGAQPGHKGHRRLLHPVEDSASVEQYLPNKICHCGGCVIPNRKPYKRHQIFDLPDISYTLVEHQIFKGECAWCGDKHQAELPESVPDVQMGPNLHSFIAIQATQHHQSIGKIQSMLKDVFQLNFSTGAISAAQGRVTEYLADTHTQIHETVKASKLIMADETSHQRNNDKRWMWAALSNDVAFFQINSGRNQHAAKRLLGEAVSHLLMTDQYSAYKYIDESKRQLCWAHILRNVIAIEESVCPENQKIGEKLALIAHSVFRCHHRYIEEKITESQYYRRLRRLRKSWLHWLKLGSYQCSKRYRGRCRNLIADDAMVWRFMDDSECPLTNNAAERVLRNYILMRKCCYVTRSYRGDPFRERMFSLIETAKLQQVSAYKWLREIVEHHMLKVDYQAPVFLA
SIO_010081: VRUMOI_RS18950
subclass of: SO_0000673
so part of: VRUMOI_RS18950
location: complement(49053..50459)
location: region:49053-50459:-1
so has part: feature:49053-50459:-1:exon

WP_089139189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49053-50459:-1:exon

VRUMOI_RS18955
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
gene: dhaR
locus tag: VRUMOI_RS18955
so part of: sequence
location: 50674..52599
location: region:50674-52599:1
so has part: feature:50674-52599:1:exon
subclass of: SO_0000010

position:50674:1
position: 50674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52599:1
position: 52599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50674-52599:1:exon

VRUMOI_RS18955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
gene: dhaR
locus tag: VRUMOI_RS18955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017820257.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydroxyacetone kinase operon transcriptional regulator DhaR
translation: MLLIEDTKTKWAFFQKHHWVSPEFSRTPVLESWERCIKQCSPYTWSKPHIASGFTFSSLMKRNEHLIECATTVLEDTYDMLGDEDLLLMVTDGNGCVLSVVGHHSMQQEMQALGIKQGCFLSEGKIGTNAVNLCISTHIPSEVFAAEHFNRHLHSYASVAAPVFDQFGKLRGTTCLLKKAESYKKENLVIIASSAKEVSLQIHIQSEQENINRLTCAHNATLECMDDGLLAWDEESRITMVNHQSERLLNIEASQILDKEVFSVLRFPPNVLNSLESGASINRKLTTVEVRGEFVEAIITLRPLNDGTHLLFLHPIDKIRELAQQQIGGSARYTFSTLPVISRKMKHVITVAKRAIKSKSPILITGEEGVGKATLAMAIHNESTYKEGPIITLNCRSINTEQLVKETLGYDEGQGMPSKFELAHGGTLFLEKVEYLSPDLQAVLLKLLKTGLVSRSDSLRLIPVDFQLITSTASEISEYVTQRSFGRQLYYEISSNELHIPPLRKRKEDIEFLVQQLISHYERRHNVTISIEPVALEALMNFRWSGNNSELRNRTERILLNRSSNLIKLNDIPEDIKLNSRHTAENTPVITLEEAERRAIVQAWNQCDGKMHDMAKALQIGRTTLWRKINKFGLQEQMKLY
SIO_010081: VRUMOI_RS18955
subclass of: SO_0000673
so part of: VRUMOI_RS18955
location: 50674..52599
location: region:50674-52599:1
so has part: feature:50674-52599:1:exon

WP_089139190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50674-52599:1:exon

VRUMOI_RS18960
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
gene: ptsP
locus tag: VRUMOI_RS18960
so part of: sequence
location: complement(52678..55077)
location: region:52678-55077:-1
so has part: feature:52678-55077:-1:exon
subclass of: SO_0000010

position:52678:-1
position: 52678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55077:-1
position: 55077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52678-55077:-1:exon

VRUMOI_RS18960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
gene: ptsP
locus tag: VRUMOI_RS18960
EC number: 2.7.3.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017820258.1
GO function: GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate--protein phosphotransferase
translation: MVGIVVVSHSRRLAEGVAELATQMTQGKAKLAIAAGIDDPENPIGTDAIAVMEAIEQVHDQQGVVVLMDLGSALLSTEMALDLIDDHVRENVTLISAPIVEGTMAASVAAAAGLPLSTVVEEAQNALSVKREHLGDQLLTSAEIAPVSENFEQERTFDWVVQNPNGLHARPAAAIVGALAPFDCQLWLKKGERRVNAKSLNSIAKLGVRSQETITLCALGSQSSEAIKEFEALASEHFGEKEAVEQGIIESEESTDTLLDDMVPNQIEGAVVGLRVNDGIATAPVVLFTHEMPVVPERDFQSEQDEIERVKHAIGVVVQHLQEQAKQPKGEIFSAHSMMLSDPELWASVESRIQTGMIAEQAWIESLQTLADEFRQAESQYMREREADVHDIARQVMVEMTGVTPNAIDIKEPSILLARDLMPSDVAGLDKSKVLGICLSEGGKTSHSAILARAMGIPAIVKAQGCLDAVRAGQVVTIDGFRGHLWFSPSDAVQQELEAQQIEWQNSRQSALASAQQAAVTCDGVHIPVFANIGGPKDIDDALTSGAEGVGLFRTEFLFQNSDELPTEEAQYQVYRDIAAALGDKPLTIRSLDVGGDKPLVAYPMPAEDNPFLGLRGVRLCLQHESLFTAQLRAILRAFHEQPNIQLMIPMVAQVEEVRKVKALLAHQANQLGLDATHLPVGIMIEVPAAVLNADALAQEVDFFSIGTNDLTQYVMAADRGNAAVAELVNYFEPSVLKAIELTCAAGDRAGIPVSMCGEMAGDPNATETLLRVGLRKFSASSSMLPGLKAQIRQLSVDV
SIO_010081: VRUMOI_RS18960
subclass of: SO_0000673
so part of: VRUMOI_RS18960
location: complement(52678..55077)
location: region:52678-55077:-1
so has part: feature:52678-55077:-1:exon

WP_089139191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52678-55077:-1:exon

VRUMOI_RS18965
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
gene: dhaL
locus tag: VRUMOI_RS18965
so part of: sequence
location: complement(55079..55714)
location: region:55079-55714:-1
so has part: feature:55079-55714:-1:exon
subclass of: SO_0000010

position:55079:-1
position: 55079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55714:-1
position: 55714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55079-55714:-1:exon

VRUMOI_RS18965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
gene: dhaL
locus tag: VRUMOI_RS18965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005379705.1
GO function: GO:0004371 - glycerone kinase activity [Evidence IEA]
GO process: GO:0006071 - glycerol metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydroxyacetone kinase subunit DhaL
translation: MQIEKQHIVHWLELCAKTYQENQDFLTDLDRDIGDADHGLNMNRGFKKVAEKLPQFADQNIGSILKNTGMTLLSSVGGASGPLYGTLFIRTAAAVGTREQLTFEELVDALKSGVDGVVSRGKAELGDKTMCDVWLPVLVSVKASLENGMSADHLLNEMVELAETNAVATIEMLAKKGRASYLGERSIGHQDPGATSSLLMIKALQQAIAGN
SIO_010081: VRUMOI_RS18965
subclass of: SO_0000673
so part of: VRUMOI_RS18965
location: complement(55079..55714)
location: region:55079-55714:-1
so has part: feature:55079-55714:-1:exon

WP_005379705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55079-55714:-1:exon

VRUMOI_RS18970
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
gene: dhaK
locus tag: VRUMOI_RS18970
so part of: sequence
location: complement(55730..56788)
location: region:55730-56788:-1
so has part: feature:55730-56788:-1:exon
subclass of: SO_0000010

position:55730:-1
position: 55730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56788:-1
position: 56788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55730-56788:-1:exon

VRUMOI_RS18970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
gene: dhaK
locus tag: VRUMOI_RS18970
EC number: 2.7.1.121
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005379704.1
GO function: GO:0004371 - glycerone kinase activity [Evidence IEA]
GO process: GO:0006071 - glycerol metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydroxyacetone kinase subunit DhaK
translation: MKKLINQVDDVVLQQMEGLALSRPELKANYEPRYMWHEETPGQVALVSGGGCGHEPLHAGFIGKGMLTGACPGEVFTSPTPDQMYECGNQVNTGEGVLFIIKNYTGDVLNFETAVELLHTDGIKVGSVLVDDDVAVKDSLYTAGRRGVAGTVLVEKLVGAAANKGYSLEQCEALARRVNNHCRSFGVALNACVVPAAGKPSFVLEDDEVEFGVGIHGEPGIKRVKYTDVDTLVDEMFTEVAENTPYQRTLRIWNRDEGEWGEVESSIEPFAAEHDYIVMVNGMGGTPTSELYGVYRRLAHNCEQAGFRIVRNMVGNFCTSLDMEGVSITLLKADKEMLELFDAPVDTAAIKW
SIO_010081: VRUMOI_RS18970
subclass of: SO_0000673
so part of: VRUMOI_RS18970
location: complement(55730..56788)
location: region:55730-56788:-1
so has part: feature:55730-56788:-1:exon

WP_027695153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55730-56788:-1:exon

VRUMOI_RS18975
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18975
so part of: sequence
location: 57142..58224
location: region:57142-58224:1
so has part: feature:57142-58224:1:exon
subclass of: SO_0000010

position:57142:1
position: 57142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58224:1
position: 58224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57142-58224:1:exon

VRUMOI_RS18975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005379703.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol dehydrogenase
translation: MDKIIISPSKYVQGEQVLTSIAHYVKTLGERPLVIADEFVTNLVGDDVKQSFADEKLPLTMNIFGGECSRVEIERITDICATQKHDVIVGIGGGKTLDTAKAVAFYTKIPVVVVPTIASTDAPTSALAVIYTPEGEFAEYLMIPKNPDMVIMDTSVIAKAPVRLLVSGMGDALSTYFEARANMTSGKATMAGGLATRSAQALAKLCYETLLEDGVKAKAAVENGVSTKAVENIIEANTYLSGIGFESSGLAGAHAIHNGLTKLEECHHLYHGEKVAFGTLVQLVLENAAMEEINTVLAFCRSVGLPTNLFDMGVKELNHDKLREVAEASTAEGETIHNMPFPVTAENVYSAILTAHQLGQ
SIO_010081: VRUMOI_RS18975
subclass of: SO_0000673
so part of: VRUMOI_RS18975
location: 57142..58224
location: region:57142-58224:1
so has part: feature:57142-58224:1:exon

WP_006742744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57142-58224:1:exon

VRUMOI_RS18980
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18980
so part of: sequence
location: complement(58275..59429)
location: region:58275-59429:-1
so has part: feature:58275-59429:-1:exon
subclass of: SO_0000010

position:58275:-1
position: 58275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59429:-1
position: 59429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58275-59429:-1:exon

VRUMOI_RS18980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18980
EC number: 2.7.13.3
inference: COORDINATES: protein motif:HMM:TIGR01386.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal sensor histidine kinase
translation: MWVFEGKQNVYQNSSLTIPQNRAYSISSPQVLNHECAIEWSEVSLNIRAFAFQAGEYQVVLGMSINHHILFLDKLDWILFWALGLAFVISSALSGWIVKRGLKPIVGLNQHIQQISPEQMGIRLDPDSLPIELRELANKHNAMLDRLQTGFRRLSEFSSDIAHELKTPLTNITTQNQVILGACRTPEEYQDAIASTLEELNRITKTINDLLYIAKAENKLIHRHDEVFAVREEIDRLVAYFEILAEDAEVRIVNSGDGQLYMDKNMFERAVGNLLSNAIRHAYADSTIVIDVQEVDEWVTISVSNQGDSIAEQNLPYLFDRFYRADKSRQHVGSVGAGLGLSITQSIVQAYEGQIKVTSDKDRTRFVLMLPSAGVNGSDKSVEA
SIO_010081: VRUMOI_RS18980
subclass of: SO_0000673
so part of: VRUMOI_RS18980
location: complement(58275..59429)
location: region:58275-59429:-1
so has part: feature:58275-59429:-1:exon

WP_162598464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58275-59429:-1:exon

VRUMOI_RS19345
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19345
pseudo: true
so part of: sequence
location: complement(<59461..60354)
location: region:59461-60354:-1
so has part: feature:59461-60354:-1:exon
subclass of: SO_0000010

position:59461:-1
position: 59461
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:60354:-1
position: 60354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59461-60354:-1:exon

VRUMOI_RS19345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011715680.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1634 family transposase
SIO_010081: VRUMOI_RS19345
subclass of: SO_0000673
so part of: VRUMOI_RS19345
location: complement(<59461..60354)
location: region:59461-60354:-1
so has part: feature:59461-60354:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59461-60354:-1:exon

VRUMOI_RS18985
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18985
so part of: sequence
location: complement(60447..60680)
location: region:60447-60680:-1
so has part: feature:60447-60680:-1:exon
subclass of: SO_0000010

position:60447:-1
position: 60447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60680:-1
position: 60680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60447-60680:-1:exon

VRUMOI_RS18985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18985
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDIMTISVILGAAFAFTFLLEGFIRAIRATFGHLIHLASKLLQLCWTMTKAVAFDFPFYFYGAFNLHSAANFRIKTM
SIO_010081: VRUMOI_RS18985
subclass of: SO_0000673
so part of: VRUMOI_RS18985
location: complement(60447..60680)
location: region:60447-60680:-1
so has part: feature:60447-60680:-1:exon

WP_089139192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60447-60680:-1:exon

VRUMOI_RS18990
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18990
so part of: sequence
location: 61269..61532
location: region:61269-61532:1
so has part: feature:61269-61532:1:exon
subclass of: SO_0000010

position:61269:1
position: 61269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61532:1
position: 61532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61269-61532:1:exon

VRUMOI_RS18990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18990
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFDFLQHLTPALSNVVTIASNLTTDYPITIPVMFLTLLFGRKLISKAAFIITKVVLLPINLAIIFITYLVDQAQLQLDSLVTKSKSH
SIO_010081: VRUMOI_RS18990
subclass of: SO_0000673
so part of: VRUMOI_RS18990
location: 61269..61532
location: region:61269-61532:1
so has part: feature:61269-61532:1:exon

WP_089139193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61269-61532:1:exon

VRUMOI_RS18995
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS18995
so part of: sequence
location: complement(61686..62630)
location: region:61686-62630:-1
so has part: feature:61686-62630:-1:exon
subclass of: SO_0000010

position:61686:-1
position: 61686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62630:-1
position: 62630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61686-62630:-1:exon

VRUMOI_RS18995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS18995
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTHLLRTYTDESLVEKYKNKYHVTVAWTIDFKDELLPSLDVLHKNYAVDPNKLKRGVGSLIVEISSDAIQSEKIAAFVGEVLAVTQILDENGVNAFGFEIETSVIRHQMAVEVSQDLSLKLLTGIDLDIDSLPSEEHTSFGLALSSAAYLFGCNFTTGTDHSWAQPYINESNKFDYNNAISAFSLEKRLRVQLGFGEILITPKTIREYLALPFCRFQREERGYVEGRPFDKVMKIIAKSDAILGDNHDHTISARRSLGENALAIFNQSAHVTTRLSPASVSSKKYYAAGFRMMHSEKMRKQLIDLGYLKAGEQ
SIO_010081: VRUMOI_RS18995
subclass of: SO_0000673
so part of: VRUMOI_RS18995
location: complement(61686..62630)
location: region:61686-62630:-1
so has part: feature:61686-62630:-1:exon

WP_089139194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61686-62630:-1:exon

VRUMOI_RS19000
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19000
pseudo: true
so part of: sequence
location: 62719..63870
location: region:62719-63870:1
so has part: feature:62719-63870:1:exon
subclass of: SO_0000010

position:62719:1
position: 62719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63870:1
position: 63870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62719-63870:1:exon

VRUMOI_RS19000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612151.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: VRUMOI_RS19000
subclass of: SO_0000673
so part of: VRUMOI_RS19000
location: 62719..63870
location: region:62719-63870:1
so has part: feature:62719-63870:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62719-63870:1:exon

VRUMOI_RS19005
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
gene: dcuC
locus tag: VRUMOI_RS19005
so part of: sequence
location: 65057..66418
location: region:65057-66418:1
so has part: feature:65057-66418:1:exon
subclass of: SO_0000010

position:65057:1
position: 65057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66418:1
position: 66418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65057-66418:1:exon

VRUMOI_RS19005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
gene: dcuC
locus tag: VRUMOI_RS19005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009841415.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO process: GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: C4-dicarboxylate transporter DcuC
translation: MVALLALPIVFGAGLLITKKYNTQAVLFGTGLLMMLIGAFSGHVDFVPKGTASSGSVFVDFFLAIKAISSGTLAKLGLIIMAVGGFSKYMGHIGAANALVSIATKPLSMIKNPYIILALSYLLGQSLNVFIPSAVGLAMLLLVALYPVLVGIGCTPASVAAVLATTACLDLGPASGTANKAAEVIGIDAASYFIEHQLFIGVITALVIAALHFVSQKYFDKKDAEKGVEYELQAKEIEVRDAPTWFAFLPILPLFMLLAFSKFAITSVKIDVVTAMFISLAIAMLCDFIYSRDGRKVADSLKVYLKGMGDVFSSVVSLIIAAQTFVVGLTAIGFIDGLLHLSSHLGFGYMMMVLLMIAIIGITSFLSGSGNAAFYSFSNLAPDVAAQVGVSTAALALPMQLSAGIFRSFSPVSGVVIACAGVANIPPTELVKRTFIPMVGGLLTVILVTFLGA
SIO_010081: VRUMOI_RS19005
subclass of: SO_0000673
so part of: VRUMOI_RS19005
location: 65057..66418
location: region:65057-66418:1
so has part: feature:65057-66418:1:exon

WP_027695125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65057-66418:1:exon

VRUMOI_RS19010
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19010
so part of: sequence
location: 66446..67804
location: region:66446-67804:1
so has part: feature:66446-67804:1:exon
subclass of: SO_0000010

position:66446:1
position: 66446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67804:1
position: 67804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66446-67804:1:exon

VRUMOI_RS19010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009841416.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylosuccinate lyase family protein
translation: MLGQNTSVFDSDLYSPLFTQKEMKQVWSDTNLIHCWLRFETAIAKVQAQLGIIPSEAAEAIKQACETIEIDWQRLSADTESVGMAIKPLIDQVCEHGDDQVKQYLHWGCTTQDLLDTSLAMRLKQSLTIIRRQLHELGEQLKSMAIEHKDTVCVARTNSMDALPTTWGLQVSSYLQEISRHIVRLDALHSRATTGMYGGAVGNLSSIGSQGLSVRKALFIELELTQPQGLNNGSLDNIVEVVQFFALIHGSLCRIANDVETMGRASIAELREGEGGGGSSTMPHKANPRASNIIQTLSRMGWMYASSAPNMMDQQDLRAASMRMLNWSLVPESALTVSTSLERAIRLIKHLIVNEQTMKDNFAASRNFIMSEAVMMTLAKKVGRNNSYLALKDAVAQAATTDSLEQALRATSSISDILTDQEIAEACNPQNYLGCNQELIQEAIQQFEQVAP
SIO_010081: VRUMOI_RS19010
subclass of: SO_0000673
so part of: VRUMOI_RS19010
location: 66446..67804
location: region:66446-67804:1
so has part: feature:66446-67804:1:exon

WP_089139918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66446-67804:1:exon

VRUMOI_RS19015
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19015
so part of: sequence
location: 67804..69489
location: region:67804-69489:1
so has part: feature:67804-69489:1:exon
subclass of: SO_0000010

position:69489:1
position: 69489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67804-69489:1:exon

VRUMOI_RS19015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004733414.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent malic enzyme
translation: MSTQNRLFIRQAGNTLLNTPLLNKGSAFTLTERRNFNLTGLLPHNIESIEEQADRAYEQFSSMASGMDQHIYLRNIQDTNETLYYKLLNNHIEEMMPIIYTPTVGEACQNFSQIYRRNRGLFLCYEDKDQLEEMINNAPNSDVRVIVITDGERILGLGDQGIGGMGIPIGKLALYTACGGINPEYTLPIVIDVGTNNSKLLSDPLYMGWRHPRLSTAQYDHFIDDCLKALHKRWPKALIQFEDFAQANAMPILQRYKDKLCCFNDDIQGTASVTVGTLLSAANASGKPLSQQKIAFAGAGSAGCGIAEAIIAQMVKEGISEQQARQQVFMIDRWGMLEQGMSNLLSFQQKLTQPQSIRKQWKIKANQDISLLDVITHAKPDVLIGVTGVAGLFNQQIISALCAGCEHPMVLPLSNPTNRVEATPQDIITWSQGKAIVATGSPFPDVHYQGQTYPIDQCNNSYIFPGVGLGVLVSEATRITNDMLQVASEALAELSPMANGSNRLLPPLQDIQEVSKHIALAVAKKAIEQKVAAPRSEARLSSKLDELFWQAKYAEYRRIAS
SIO_010081: VRUMOI_RS19015
subclass of: SO_0000673
so part of: VRUMOI_RS19015
location: 67804..69489
location: region:67804-69489:1
so has part: feature:67804-69489:1:exon

WP_089139919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67804-69489:1:exon

VRUMOI_RS19020
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19020
so part of: sequence
location: complement(69577..70458)
location: region:69577-70458:-1
so has part: feature:69577-70458:-1:exon
subclass of: SO_0000010

position:69577:-1
position: 69577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70458:-1
position: 70458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69577-70458:-1:exon

VRUMOI_RS19020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008910655.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MurR/RpiR family transcriptional regulator
translation: MTSNIQLTYHGYCQLVSRIEQLTDSEKSLHTYIAEHFGELPYHGIVDLATNADVSKATIGRFLNKLGFTGYAAFKSALKDGLKDNQMSAPIDIYHEERERKPQDTPPLVHEFSSQIQQLINKFTNSINIDCLDKAIDLFMDTERKIYVVGPSSSAAMAMHFSTLIKYMRGDVALLNLDIGELPKRLIDVKKDDVLVVFSYYRFNSVAYDIARWFKKKHASVVLITNASSNPYGKYSDLQFVLPSETQTIFQSRMAGFMFVELILHLSYEKSAGEGNFAILEELFQFFGTFSAD
SIO_010081: VRUMOI_RS19020
subclass of: SO_0000673
so part of: VRUMOI_RS19020
location: complement(69577..70458)
location: region:69577-70458:-1
so has part: feature:69577-70458:-1:exon

WP_089139920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69577-70458:-1:exon

VRUMOI_RS19025
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19025
so part of: sequence
location: complement(71064..72509)
location: region:71064-72509:-1
so has part: feature:71064-72509:-1:exon
subclass of: SO_0000010

position:71064:-1
position: 71064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72509:-1
position: 72509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71064-72509:-1:exon

VRUMOI_RS19025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612081.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MTKKKSKFSSTPPIASDINEANALISELWEQLRHYEDRLKASSANSSKSPSSDGPKTKKAQSPSGRNPRGAKQGHEGHKRQLSELKESDTVVDCYPESTCSCCGDTDLEMSDKPFYRHQVHEIPPPRIDITEYRLYSGKCSQCGEAVKAQKPSDTPQGVMGPNLMSHIAILAGQYHLSVRKIRSLLQDQFGTTFSVGAISEAQSRIASMLTPLHQAIKTNIQSAPLVHVDETSHSRNDEERLRWCWLVSSDDLVYEKILYSRSTHSAKTVLDSDYSGIVVSDQYSGYNWLSSDRHQLCWSHVIRNLQQIADYAGRGHTANIGQRLLLLSKLVFRTRHRWESDHIDEALYLDRLNRIRCRFNHWLDKGASQIPIQRYQGRCRKLKEHSESLWLFLTTPKIPLTNNEAERRLRGFVIQRKISYGTTSDAGDKFRDRLHALIETCKKRQISSLETLTRIVTAVISQQPYPNVFGLSETSFYANA
SIO_010081: VRUMOI_RS19025
subclass of: SO_0000673
so part of: VRUMOI_RS19025
location: complement(71064..72509)
location: region:71064-72509:-1
so has part: feature:71064-72509:-1:exon

WP_089139921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71064-72509:-1:exon

VRUMOI_RS19030
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19030
so part of: sequence
location: 72866..73861
location: region:72866-73861:1
so has part: feature:72866-73861:1:exon
subclass of: SO_0000010

position:72866:1
position: 72866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73861:1
position: 73861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72866-73861:1:exon

VRUMOI_RS19030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005716609.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: substrate-binding domain-containing protein
translation: MKNKRPSLQDIADEVGITKMTVSRCLRDSSKVSPVTYQKIMAAIDKLGYIPNKAPDLLSHAKSHAIGVLVPSLTNQVFADVIRGIESITEPAGYQTMLAHYGYSQEIEEDRISHLLSYHVDGLVLSESQHSERTYRMLQTAGIPVVEIMDLQPSPIHQCVGFDNHKAGYEITRLMIQQGHLNIVYIGARLDIRTQQKLAGYTQAMRESKLEPRKILTDEASSYSLGSKLLHETLKQYPDVDGVFCTNDDLAVGIVFECQRLDISIPEQLAVAGFHGHDVGQAMQPQLASVKTPRLAIGELAAQQLIDRLNGIESQQSCFDLGFEVVKGQTI
SIO_010081: VRUMOI_RS19030
subclass of: SO_0000673
so part of: VRUMOI_RS19030
location: 72866..73861
location: region:72866-73861:1
so has part: feature:72866-73861:1:exon

WP_089139922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72866-73861:1:exon

VRUMOI_RS19035
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19035
pseudo: true
so part of: sequence
location: complement(73951..>74715)
location: region:73951-74715:-1
so has part: feature:73951-74715:-1:exon
subclass of: SO_0000010

position:73951:-1
position: 73951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74715:-1
position: 74715
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73951-74715:-1:exon

VRUMOI_RS19035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019840070.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: VRUMOI_RS19035
subclass of: SO_0000673
so part of: VRUMOI_RS19035
location: complement(73951..>74715)
location: region:73951-74715:-1
so has part: feature:73951-74715:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:73951-74715:-1:exon

VRUMOI_RS19040
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19040
so part of: sequence
location: complement(74726..76135)
location: region:74726-76135:-1
so has part: feature:74726-76135:-1:exon
subclass of: SO_0000010

position:74726:-1
position: 74726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76135:-1
position: 76135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74726-76135:-1:exon

VRUMOI_RS19040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611433.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS4-like element ISPrst1 family transposase
translation: MIVKAAEWAQNNFGNAELGDKRRTKRLVTLVTDLVSNIGMSVVKSSQTSDKIEAAYRFIRNEKIKAQDIETSAFNTTAELVNNYDLLLALEDTTSLNFSYKSVNPELGPLGNSTKARGMMAHSVLLFAPNEQNVVGLIEQQRWCRSLSSHGRGSKHLEYKYEDKESFKWQRASTHVAKRLKSNMSKVISVCDREADIYEYLRYKTQNNHRFVVRSMQSRRLTEENNKLYSFSENLVSVAQRTICISQRGATKTSAARKKRLVNCDIKYSPVTLKVPGNKRGNLEDISLYYVGCHENSTGSKEPLRWHLLTSEKINNADDAKRIIEFYEKRWLIEDYHKAWKSGGTKVESLRMQTKNSLEKMTVILSFIAIRIQQLRYVGLNKDKAKNTSCETLLTPLEWKLLWIKVEGVQPPKLTPNIHWAYISLGKLAGWNNSKLTGRISWITLWEGWFKLQTLVEGYRITQDFIFDL
SIO_010081: VRUMOI_RS19040
subclass of: SO_0000673
so part of: VRUMOI_RS19040
location: complement(74726..76135)
location: region:74726-76135:-1
so has part: feature:74726-76135:-1:exon

WP_110410729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74726-76135:-1:exon

VRUMOI_RS19045
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19045
pseudo: true
so part of: sequence
location: complement(<76228..76815)
location: region:76228-76815:-1
so has part: feature:76228-76815:-1:exon
subclass of: SO_0000010

position:76228:-1
position: 76228
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:76815:-1
position: 76815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76228-76815:-1:exon

VRUMOI_RS19045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019840070.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SLC13 family permease
SIO_010081: VRUMOI_RS19045
subclass of: SO_0000673
so part of: VRUMOI_RS19045
location: complement(<76228..76815)
location: region:76228-76815:-1
so has part: feature:76228-76815:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:76228-76815:-1:exon

VRUMOI_RS19050
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19050
so part of: sequence
location: 76955..77512
location: region:76955-77512:1
so has part: feature:76955-77512:1:exon
subclass of: SO_0000010

position:76955:1
position: 76955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77512:1
position: 77512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76955-77512:1:exon

VRUMOI_RS19050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011848115.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gluconokinase
translation: MSNKGLGKVFLIMGVSSTGKSSIGESLAKQLGAKFIDGDDLHPKSNILKMVSGHPLNDDDRKPWLERIRDAAFSIETKNELGVIVCSALKRQYRDQICEGNKSVNFLHLHGDFELVKQRMLARKGHFMPIELLQSQFDTLEMPASDEHNVFQVDIEGDFNTVITRCLQQIDQIKQKDALATATTA
SIO_010081: VRUMOI_RS19050
subclass of: SO_0000673
so part of: VRUMOI_RS19050
location: 76955..77512
location: region:76955-77512:1
so has part: feature:76955-77512:1:exon

WP_038149440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76955-77512:1:exon

VRUMOI_RS19055
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
gene: edd
locus tag: VRUMOI_RS19055
so part of: sequence
location: 77526..79316
location: region:77526-79316:1
so has part: feature:77526-79316:1:exon
subclass of: SO_0000010

position:77526:1
position: 77526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79316:1
position: 79316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77526-79316:1:exon

VRUMOI_RS19055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
gene: edd
locus tag: VRUMOI_RS19055
EC number: 4.2.1.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005524776.1
GO function: GO:0004456 - phosphogluconate dehydratase activity [Evidence IEA]
GO process: GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphogluconate dehydratase
translation: MMNNTILRVTNNIAERSKATREAYLKHIAELANQGKSRKSLSCGNLAHTVAACGGSKSSILDFTTLNVGIITAYNDMLSAHQPYLTYPDKIKEALANAGHSAQVAGGVPAMCDGVTQGQPGMDLSLFSRDLIAQATAIGLSHNAFDATLLLGVCDKIAPGQIIGALSFGHVPAAFVPSGPMATGISNSEKVQVRQEYAAGNVGVAALQNMECNAYHSPGTCTFYGTANTNQLVFEAMGLMLPGSAFVSPTDPLRDELTKMASLQMVKVAHGSADFRPIGQVVDEKALVNGLVALLASGGSTNHTIHMIAIAKAAGLILTWDDFDHLSDVVPQLTKMYPNGPADINAFQAAGGVPTLMKRLAELDLIHMDATPIYGQMSDYLTSPRLIDGKVVYQPAQDSTDPDVIAVNGHVFSQQGGLKLLDGNLGRGMIKISAVSERDRYIKAPARVFESQHDVEKAYQAGELNQDIIIVVRHNGPAANGMPELHKLMPILGNVMKAGFKTALVTDGRLSGASGKVPAAIHMTPESAKGGPLSRLQDGDIIVLDAQQGTIMCESNLEDRESNVTVNINEHLGAGRELFTIFRQHVSSAEAGASIL
SIO_010081: VRUMOI_RS19055
subclass of: SO_0000673
so part of: VRUMOI_RS19055
location: 77526..79316
location: region:77526-79316:1
so has part: feature:77526-79316:1:exon

WP_162598471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77526-79316:1:exon

VRUMOI_RS19060
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19060
so part of: sequence
location: 79407..80036
location: region:79407-80036:1
so has part: feature:79407-80036:1:exon
subclass of: SO_0000010

position:79407:1
position: 79407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80036:1
position: 80036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79407-80036:1:exon

VRUMOI_RS19060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015878876.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
translation: MNWTISPASVFQSSPIVPVMVIDDLDDALPMAKALADGGISIFEITLRTPVALEAINLISTAMPDALVGAGTVLNSEQYDAAVNAGAQFTISPGYSESLLKHAKQHKVALIPGVATPSEVMTALEHGYDHLKFFPAEANGGAPALKAICAPLTQVKFCPTGGINPKNVRDYRAISNVMTVGGSWMLPADKIKAKDWQGITELVKEALAI
SIO_010081: VRUMOI_RS19060
subclass of: SO_0000673
so part of: VRUMOI_RS19060
location: 79407..80036
location: region:79407-80036:1
so has part: feature:79407-80036:1:exon

WP_089138979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79407-80036:1:exon

VRUMOI_RS19065
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19065
so part of: sequence
location: complement(80206..80673)
location: region:80206-80673:-1
so has part: feature:80206-80673:-1:exon
subclass of: SO_0000010

position:80206:-1
position: 80206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80673:-1
position: 80673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80206-80673:-1:exon

VRUMOI_RS19065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004413661.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Sbal_3080 family lipoprotein
translation: MFKKAVVLSASLFLAACSAPKYTVNPIQENEQRKEITIVKDDATRAIFLDTMQEWCLDNAKRCTLVPDGSHPNPSELTLIYVSRWSWDLSTYISDSRINAYKDERKVGEVEFKAPDTINTDKWGDDRKRILMMLDLLFGKQTATEAHSKIESGEI
SIO_010081: VRUMOI_RS19065
subclass of: SO_0000673
so part of: VRUMOI_RS19065
location: complement(80206..80673)
location: region:80206-80673:-1
so has part: feature:80206-80673:-1:exon

WP_089138943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80206-80673:-1:exon

VRUMOI_RS19070
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19070
so part of: sequence
location: 80910..81485
location: region:80910-81485:1
so has part: feature:80910-81485:1:exon
subclass of: SO_0000010

position:80910:1
position: 80910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81485:1
position: 81485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80910-81485:1:exon

VRUMOI_RS19070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19070
inference: COORDINATES: protein motif:HMM:NF022590.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2913 family protein
translation: MTDSTFHKQLSDVLTNALLHLYLEVTKSQKFFTTQARNQIIIRYIKPLVKDRRYALVKKRLKTISLMKPAGESIEKRLLQIVDSYQSVVNPNDSEKLFRVLTHMEKGGIYSMLTESDDMDDQDILMVSEAKIAESFDADGLMLKPLTLFIKTEHPDVIERELSVLGFFSISASTTPEKTSMYEFTLSPLNT
SIO_010081: VRUMOI_RS19070
subclass of: SO_0000673
so part of: VRUMOI_RS19070
location: 80910..81485
location: region:80910-81485:1
so has part: feature:80910-81485:1:exon

WP_162598468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80910-81485:1:exon

VRUMOI_RS19075
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19075
so part of: sequence
location: complement(81482..82225)
location: region:81482-82225:-1
so has part: feature:81482-82225:-1:exon
subclass of: SO_0000010

position:81482:-1
position: 81482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82225:-1
position: 82225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81482-82225:-1:exon

VRUMOI_RS19075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19075
EC number: 3.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011070739.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SprT family zinc-dependent metalloprotease
translation: MNKPLINDKAAYAEQADLIEGQGYQVHIVRTSRRKTASMKVEDGVVSIVVPKSLARERIQSLVEAKHQWIIEKLAIYQVSQPASEKHYVSGEAFPYLGRNYRLKVLQGELRGAKLLNGRMTVTVPEPETQRHYVRKSLENWYLRQAQKKIREKVERYRSVVGVETGVIRIKEFKSRWGSCTPYGDLEFNWLIVMAPNRIVDYVVIHELCHLIHHDHSPSFWKEVERVMPDYREHKAWLKEHGHRLGF
SIO_010081: VRUMOI_RS19075
subclass of: SO_0000673
so part of: VRUMOI_RS19075
location: complement(81482..82225)
location: region:81482-82225:-1
so has part: feature:81482-82225:-1:exon

WP_089138945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81482-82225:-1:exon

VRUMOI_RS19080
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19080
so part of: sequence
location: complement(82248..85460)
location: region:82248-85460:-1
so has part: feature:82248-85460:-1:exon
subclass of: SO_0000010

position:82248:-1
position: 82248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85460:-1
position: 85460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82248-85460:-1:exon

VRUMOI_RS19080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017015871.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction endonuclease subunit R
translation: MNNEFDKVEAPAIAQLVSQGWQYVRGQDLAPDHLDTDGKAERAYYRDVVLVKRLESAIKRLNPWISDENLRKVSREVTHPHHAGLMEYNHAFYQTMVQYLSVEQDLGKGRKGQTVKLIDFDNPDNNEFLCCNQFKVEGLNQNIIPDIVCFVNGIPLAVIECKSPYIASPMSEGINQLRRYANLRQPEVDEGAEKLFWYNQLMISTCRDKAKVGTISSSSQHYGDWKDAYPYTAEHITQQTLSNKLDNLQAKLEIELPEHALLEDTTPQTELLQAAEAPALYEVNAQNITEPSDHDVTAQQRLLAGMFNKASFLDIVQNFVLFETDDGKMIKKVARYQQYRAVNKVIERLKGGKDRKALSRKDRSGVVWHTQGSGKSLTMVMLAVKMRRDPILKQYKLVFITDRTQLDEQLSNTFRDAQGETVYNAGSVAQLKELLKKDSSDLVTAMVQKFSDLEKEQANSEFVDLNPSDKIIVLADEAHRTQFGGLALTINAALPNAPKIGFTGTPLLKTQKMGQAFGGYIDEYKINQAVEDGATVKLLYEGREVKSEVAGDSLDALFEEYFGDYSKEEQQEIKQKYGVEKAVREAPARIRWVCLDIIKHYKEHIRPDGFKAMIVVGSRHAAALYKQTLDELDGPLSEVIISGKHNEEAYLAKYTDKAHQKQVIANFKKPFGTDAKDTKEADKKFDNTSFLIVKDMLLTGFDAPIAQVMYIDRLLQDHTLMQAIARVNRSYKGKECGYVVDYYGLATQLTQALELFSSEDVEGTYQSLKDEIPKLKAKHTRVMSFFKGMTSDDVDDYVVLLKDEAKRAQFDMAFKQFAKQLNVILPDTAAVPFMADARFLGKVHHAAKNKYRDEGLDMNEIGAKVRALVDEHILSTGVDPKIPPIDLLAVDFKDSIQATKSDESKASEIESAIKHHININLDEDPEYYRSLSLRLRDIIEKTAGRWSEQLELLLEFTGDIEQGHQQAAQDLGLSEVEFAFYGILMTEVTNVSDGDVVDASIHESIKDTTQELVKTLEEATQIVDFFNKQDEIKRMKKIIKRIVLDQPFGDKDLVNILQERFMELAKTKFG
SIO_010081: VRUMOI_RS19080
subclass of: SO_0000673
so part of: VRUMOI_RS19080
location: complement(82248..85460)
location: region:82248-85460:-1
so has part: feature:82248-85460:-1:exon

WP_089138946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82248-85460:-1:exon

VRUMOI_RS19085
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19085
so part of: sequence
location: complement(85606..86265)
location: region:85606-86265:-1
so has part: feature:85606-86265:-1:exon
subclass of: SO_0000010

position:85606:-1
position: 85606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86265:-1
position: 86265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85606-86265:-1:exon

VRUMOI_RS19085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19085
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQTHDTDQLFLQIRTAHRLLAAYYQRLLPTIEQIAKGLELDYCLWQPKDFARPGHRSTNQFDRWHWDLLPALSTYYVFGHFEHSNKVIVGEYLVDFLVNSDTGVTKTNSHGEPDALSLMTSVENAESTLTINVYAPYQAMTGNWANGVWDGCAKANISESPNPQLDSKKAVVSNGFTIPLTDLFNDNAVECLIERTQTFIGAAVDKAKSLVEENQQENS
SIO_010081: VRUMOI_RS19085
subclass of: SO_0000673
so part of: VRUMOI_RS19085
location: complement(85606..86265)
location: region:85606-86265:-1
so has part: feature:85606-86265:-1:exon

WP_089138947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85606-86265:-1:exon

VRUMOI_RS19090
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19090
so part of: sequence
location: complement(86252..87118)
location: region:86252-87118:-1
so has part: feature:86252-87118:-1:exon
subclass of: SO_0000010

position:86252:-1
position: 86252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87118:-1
position: 87118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86252-87118:-1:exon

VRUMOI_RS19090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19090
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKAILNGKAGRIDNQQGESVSWSSVFKAREDLLTSTVFERFAYLSDEIQAYLIAQWFVHCSGHAPSNIGELIDISYWPRFSHEHNNGSNQVEPDLILHFEYANILVEVKPPEGGDQYKWQWQKEIESFLQNSEDECDKPLYFLAIGRIEQVDAIRWAQSLLEQNEPLKGLGALKWQVVTDQLIELVSDKGANFSVSKQDKRIIDDILEGLSLYGLKISPFQWSQFFDTRLPTLSLTHSQLNKGMPASTGKSPKLLADSGITQLNQHNFPRLDLEVFSNLLRPHHANS
SIO_010081: VRUMOI_RS19090
subclass of: SO_0000673
so part of: VRUMOI_RS19090
location: complement(86252..87118)
location: region:86252-87118:-1
so has part: feature:86252-87118:-1:exon

WP_089138948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86252-87118:-1:exon

VRUMOI_RS19095
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19095
so part of: sequence
location: complement(87131..88186)
location: region:87131-88186:-1
so has part: feature:87131-88186:-1:exon
subclass of: SO_0000010

position:87131:-1
position: 87131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88186:-1
position: 88186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87131-88186:-1:exon

VRUMOI_RS19095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004798229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MHYAPPFTLNNQILSRVANISEQLGRLTATQNRAQSLLLRKVNRVRTIQGSLAIEGNQLTEDQITAILEGKRVIAPAREVQEASNALTVYEQLDSFAYQKESSLLQAHKTLMLGLIDSAGQYRNTGVGVIKNQQVIHMAPPADRVPKLMGELFTWLANSDDHPLIKSCVFHYEFEFIHPFADGNGRMGRLWQTLILKQYHEVFTYLPVESLIAAHQTEYYQAIADSTKAADSAPFIAFMLSMIEQALQQLHHTSESVETGVSPQVAPQVTPQVKTLIKVMKVAGETEQAQTSFNRTDLQRLLGLKDKKSFNQRYLQPALSNGLIEMTIPDKPTSRLQQYRLTALGKSIQVG
SIO_010081: VRUMOI_RS19095
subclass of: SO_0000673
so part of: VRUMOI_RS19095
location: complement(87131..88186)
location: region:87131-88186:-1
so has part: feature:87131-88186:-1:exon

WP_089138949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87131-88186:-1:exon

VRUMOI_RS19100
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19100
so part of: sequence
location: complement(88188..89438)
location: region:88188-89438:-1
so has part: feature:88188-89438:-1:exon
subclass of: SO_0000010

position:88188:-1
position: 88188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89438:-1
position: 89438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88188-89438:-1:exon

VRUMOI_RS19100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19100
EC number: 3.1.21.-
inference: COORDINATES: protein motif:HMM:NF013579.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: restriction endonuclease subunit S
translation: MSNVVPEGWAIKTVGELSSVKRGASPRPIKDARWWGGNVGWVRISDVTSSNKYLKKTTQYLSAEGVSKSVKINKGEVVLSICATIGRPIIVSVDACIHDGFVWFDKLSQSIDREFWYYFLTNKEEYFSSQRQSGTQGNLNTAIVSDLNCLLPPLPEQKKIAAILTSVDEVIEKTQAQIDKLKDLKTAMMQELLTCGVGVDGKPHTEFKDSPVGRIPKGWEVKSLDTVVKCVVDCEHKTAPYVEQSEFMVVRTSNVRDGELVFDDMKFTHSDGFNEWTKRTIPTKGDVLFTREAPAGESCLVPDNLKVCMGQRMVLLRPDNDVVESDFFSMFLTSEAAKKSIFEMSIGTTVSRINIEDIKKIPCVVPPKIEQIKIANTISCVQKLLSTKQGKLESLNLTKKALMQDLLTGKVRVKVD
SIO_010081: VRUMOI_RS19100
subclass of: SO_0000673
so part of: VRUMOI_RS19100
location: complement(88188..89438)
location: region:88188-89438:-1
so has part: feature:88188-89438:-1:exon

WP_089138950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88188-89438:-1:exon

VRUMOI_RS19105
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19105
so part of: sequence
location: complement(89431..91209)
location: region:89431-91209:-1
so has part: feature:89431-91209:-1:exon
subclass of: SO_0000010

position:89431:-1
position: 89431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91209:-1
position: 91209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89431-91209:-1:exon

VRUMOI_RS19105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19105
EC number: 2.1.1.72
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009848319.1
GO function: GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction-modification system subunit M
translation: MTTSAKITLQQLESFLWQTADILRGNMDASEYKDYIFGMLFLKRLSDAFEESKQGVVQYYLDKGKTQEQAEELANDEDEYDTTFYVPENARWSALKDLKHNIGETLNKATESIEEFNPSLEGVLVTIDFNIKNKLSDAKLRDLLSHFSQYRLRNEDFERPDMLGAAYEYLIKMFADSAGKKGGEFYTPSEVVKLLVTLLKPRAGMRIYDPTIGSGGMLIQTRGYLESQGENAANLSLYGQEMNLNTWAICKMNMFLHGVQSADIRKGDTLREPKHTQGGELMTFDRVIANPPFSLKKWGKEECDSDGFARFPYGTPPKDAGDLAFVQHMIASTNAEGMVGVVMPHGVLFRGSSEKAIRQGILQDDLLEAVIGLPSGLFYGTGIPACLLVINKNKSAERKGKVLFINAELDYQEGKNQNVLRQQDLDKIVAAFDAYQDIKRYAKVVELAEIEANDFNLNIRRYADTSPPAEIFDVRAILHGGVPVREVEEDYIREEILGDFDVSLVFDIKSDMKGMTNTDERYYAFKPQIESKEALRESILQHAPADTEVDSKVIAQLERWWDKYQVSLHELDQQVQDAEQVMQGYLKELGYE
SIO_010081: VRUMOI_RS19105
subclass of: SO_0000673
so part of: VRUMOI_RS19105
location: complement(89431..91209)
location: region:89431-91209:-1
so has part: feature:89431-91209:-1:exon

WP_089138951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89431-91209:-1:exon

VRUMOI_RS19660
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19660
so part of: sequence
location: complement(91504..91632)
location: region:91504-91632:-1
so has part: feature:91504-91632:-1:exon
subclass of: SO_0000010

position:91504:-1
position: 91504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91632:-1
position: 91632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91504-91632:-1:exon

VRUMOI_RS19660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19660
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MITINLANGFVPLLIALGGLMIGAALMLYYAYKWDQRHSDDD
SIO_010081: VRUMOI_RS19660
subclass of: SO_0000673
so part of: VRUMOI_RS19660
location: complement(91504..91632)
location: region:91504-91632:-1
so has part: feature:91504-91632:-1:exon

WP_264298504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91504-91632:-1:exon

VRUMOI_RS19110
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19110
pseudo: true
so part of: sequence
location: complement(<95030..>95272)
location: region:95030-95272:-1
so has part: feature:95030-95272:-1:exon
subclass of: SO_0000010

position:95030:-1
position: 95030
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:95272:-1
position: 95272
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95030-95272:-1:exon

VRUMOI_RS19110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019824395.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF3387 domain-containing protein
SIO_010081: VRUMOI_RS19110
subclass of: SO_0000673
so part of: VRUMOI_RS19110
location: complement(<95030..>95272)
location: region:95030-95272:-1
so has part: feature:95030-95272:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95030-95272:-1:exon

VRUMOI_RS19115
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19115
so part of: sequence
location: complement(95369..95860)
location: region:95369-95860:-1
so has part: feature:95369-95860:-1:exon
subclass of: SO_0000010

position:95369:-1
position: 95369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95860:-1
position: 95860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95369-95860:-1:exon

VRUMOI_RS19115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19115
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIDTRRNQIKLMSYTDTDAEMLLSELVSIGQRASDMFDQIKEINNEPSAQRVYKQIGLAQHPLLDLYTHARTDTYDLYIRVAEALNYCTHIGELVTFLEEKLIDPDEEVFHSAFAYIEQSGDGGSFRDMLHLFGDVIKMYRTTHRLLKELPATVAAKMELIP
SIO_010081: VRUMOI_RS19115
subclass of: SO_0000673
so part of: VRUMOI_RS19115
location: complement(95369..95860)
location: region:95369-95860:-1
so has part: feature:95369-95860:-1:exon

WP_162598469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95369-95860:-1:exon

VRUMOI_RS19125
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19125
so part of: sequence
location: complement(96419..97489)
location: region:96419-97489:-1
so has part: feature:96419-97489:-1:exon
subclass of: SO_0000010

position:96419:-1
position: 96419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97489:-1
position: 97489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96419-97489:-1:exon

VRUMOI_RS19125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006713543.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MFACSKQTCELTMNSKKLPTHIKKGHQLVFSQQDLTAREANLFGLMIANMRPEDWEGNTPEYTFTAAQLSDWLGLNNRAIGSQLNDVVSRLSSRKIGIIQESKGDTEFEFTPLFKKAKYKDRVLTLVPNDALAKEYVEYNKGFSLINTKSYLGLKREYTKRLYEILSRFKGDKKLNLMEVEALKAYMGILDEKGDIKKNKSSFSNNGVFITRCIRESIIELSNDPKTQKEIMFHESPDGLGIKLHKHGRNVHSVEFLYTWINVKDPVEVLNFEDAKKIITKLETKRLTGDEPLTINELKSLAAAYRVFEEDEQAEKVERAIIKRQSAGEADESEVADKAFLDKIKELQQMNNDVEY
SIO_010081: VRUMOI_RS19125
subclass of: SO_0000673
so part of: VRUMOI_RS19125
location: complement(96419..97489)
location: region:96419-97489:-1
so has part: feature:96419-97489:-1:exon

WP_174208835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96419-97489:-1:exon

VRUMOI_RS19350
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19350
so part of: sequence
location: complement(98253..98390)
location: region:98253-98390:-1
so has part: feature:98253-98390:-1:exon
subclass of: SO_0000010

position:98253:-1
position: 98253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98390:-1
position: 98390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98253-98390:-1:exon

VRUMOI_RS19350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19350
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVIFIFWGISLVIGLLTLFASPLEKKLDKLEKCLLDYANSNNEK
SIO_010081: VRUMOI_RS19350
subclass of: SO_0000673
so part of: VRUMOI_RS19350
location: complement(98253..98390)
location: region:98253-98390:-1
so has part: feature:98253-98390:-1:exon

WP_156888664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98253-98390:-1:exon

VRUMOI_RS19130
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19130
so part of: sequence
location: complement(98457..99713)
location: region:98457-99713:-1
so has part: feature:98457-99713:-1:exon
subclass of: SO_0000010

position:98457:-1
position: 98457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99713:-1
position: 99713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98457-99713:-1:exon

VRUMOI_RS19130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019830223.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Y-family DNA polymerase
translation: MFALVDANAFYCSAEQVFRPDLRGKPIVVLSNNDGCIVAANRQAKDLGIPKFKPFFEVQRLCERKGVVALSSNYELYADLSAKMMTVIGRFAPEQHIYSIDESFLSLRHCQQAIPDLRAHGVLIRKSVWKECRLPVCVGMGPTLTLAKLANHAAKKIQGYQGVCVLDSDAERIHILKHVPVSEVWGIGRRLTTKLNVMGIKSAYDLACFDPMKAQRFFNVELERTVRELNGQACKQWDAIRADKKQIFSTRSVGTRITDLDTLQQALSKHVGIASAKVRKQQSLCKVIMCFASSSPFDAIPVSSKAVHHFPYPTSDTTVITQAVRQLAEQMFKPDVRYYKVGVGLVDLIDGKHAQIDWLNPNPDDPRLMKVLDGLNQRYGRDSLFVAAQGTVEKWAMRRERLTPQYTTKWGDIPVVRC
SIO_010081: VRUMOI_RS19130
subclass of: SO_0000673
so part of: VRUMOI_RS19130
location: complement(98457..99713)
location: region:98457-99713:-1
so has part: feature:98457-99713:-1:exon

WP_089138956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98457-99713:-1:exon

VRUMOI_RS19135
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
gene: umuD
locus tag: VRUMOI_RS19135
so part of: sequence
location: complement(99714..100112)
location: region:99714-100112:-1
so has part: feature:99714-100112:-1:exon
subclass of: SO_0000010

position:99714:-1
position: 99714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100112:-1
position: 100112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99714-100112:-1:exon

VRUMOI_RS19135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
gene: umuD
locus tag: VRUMOI_RS19135
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005419177.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translesion error-prone DNA polymerase V autoproteolytic subunit
translation: MKVTPISVSAGITGFESPASEYSQLGLDLDALLIKHPHATFFSRVSGESMRDDGIFDDDILIVDRAVNVVNNSIIVANFNGEFVCKRINTQRGLLLSSNDDYAPISIHDLDSFSVEGVVICSLRCHIPVSWC
SIO_010081: VRUMOI_RS19135
subclass of: SO_0000673
so part of: VRUMOI_RS19135
location: complement(99714..100112)
location: region:99714-100112:-1
so has part: feature:99714-100112:-1:exon

WP_027695145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99714-100112:-1:exon

VRUMOI_RS19140
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19140
so part of: sequence
location: 100271..100639
location: region:100271-100639:1
so has part: feature:100271-100639:1:exon
subclass of: SO_0000010

position:100271:1
position: 100271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100639:1
position: 100639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100271-100639:1:exon

VRUMOI_RS19140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19140
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVRTVTPLIYLVTFFAYSSEPITFGISDTKKSIMEISAETLNSYHEDSFFKRFFPVTSQINFYHWKATEDDNFIYLPGQTYFPDDPHCCPTGLLLKVDKKSHQLLSVEIPREKNKNYDYRSP
SIO_010081: VRUMOI_RS19140
subclass of: SO_0000673
so part of: VRUMOI_RS19140
location: 100271..100639
location: region:100271-100639:1
so has part: feature:100271-100639:1:exon

WP_089138957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100271-100639:1:exon

VRUMOI_RS19145
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19145
so part of: sequence
location: complement(101229..102296)
location: region:101229-102296:-1
so has part: feature:101229-102296:-1:exon
subclass of: SO_0000010

position:101229:-1
position: 101229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102296:-1
position: 102296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101229-102296:-1:exon

VRUMOI_RS19145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005536335.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MEDQSLYYPVVSDKLPKHIKKGHQLVFSRQDLSAREADLFALMIANMKVTDWDKNTPHYEFTSHQLSEWLGINSKHIGSNLSPVANRLASHKVGIKIETSRGEVEFDYRPLFKNIKYKNGVLTMVPNDMLKAEYIEYNQGFALINTHNFLDLNKEYSKRLYELLSRFKDQGFEMHPQKLNDLKGVFGLLDEAGKLKKDKSSFKNNSVFMKRCIRNSIEELSKHPTIKKELLFLESSNGDKGFELIKKGNRIVEIKFLFRWLKQGNVEELNLHDAKNTIQVLELKRLQHKERLSDEELIKLSMAYRYLGKDEYANKVDQSLAKRQAIIEPQQEEVEVDSVLEKINTLIEINDNPDY
SIO_010081: VRUMOI_RS19145
subclass of: SO_0000673
so part of: VRUMOI_RS19145
location: complement(101229..102296)
location: region:101229-102296:-1
so has part: feature:101229-102296:-1:exon

WP_089138958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101229-102296:-1:exon

VRUMOI_RS19150
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19150
pseudo: true
so part of: sequence
location: <102726..>102818
location: region:102726-102818:1
so has part: feature:102726-102818:1:exon
subclass of: SO_0000010

position:102726:1
position: 102726
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:102818:1
position: 102818
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102726-102818:1:exon

VRUMOI_RS19150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020977920.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: VRUMOI_RS19150
subclass of: SO_0000673
so part of: VRUMOI_RS19150
location: <102726..>102818
location: region:102726-102818:1
so has part: feature:102726-102818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:102726-102818:1:exon

VRUMOI_RS19155
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19155
so part of: sequence
location: complement(103246..104424)
location: region:103246-104424:-1
so has part: feature:103246-104424:-1:exon
subclass of: SO_0000010

position:103246:-1
position: 103246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104424:-1
position: 104424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103246-104424:-1:exon

VRUMOI_RS19155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018404802.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-guided endonuclease TnpB family protein
translation: MLIRKAYKFRLEPTAAQAARLAVLCGHARFVWNQGLRYCVDKLESGEKIPSAFELNKLVTQWKKEEDLTWLKEAYTDNLQQKLKDLHGAWMRCFDKSLAADKPRFKKKGKNQDSIRFVNFNKYCELDGKRVKLPSKLGWLKFRKSQEVQGNIKNCTVSFKSGHWYISFQVEQDIDEPKHNTTSAVGIDMGVAKFITLSDGSHLKPLNAFRKHEKRLAIEQRKLSRKVKFSANWMKQKAKIQKLHTLIANCRKDYLHKASNQISKNHAMIAIEDLRVSNMSKSSKGNAEEHGKNVKAKSGLNKSILDQGWYEFRRQLEYKQLWNGGLVVAVPAQYTSQTCPCCSHVSRENRKTQAHFECVECGYINNADIVGALNILERGHRLLACGESALAA
SIO_010081: VRUMOI_RS19155
subclass of: SO_0000673
so part of: VRUMOI_RS19155
location: complement(103246..104424)
location: region:103246-104424:-1
so has part: feature:103246-104424:-1:exon

WP_089138959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103246-104424:-1:exon

VRUMOI_RS19160
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
gene: tnpA
locus tag: VRUMOI_RS19160
so part of: sequence
location: 104489..104899
location: region:104489-104899:1
so has part: feature:104489-104899:1:exon
subclass of: SO_0000010

position:104489:1
position: 104489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104899:1
position: 104899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104489-104899:1:exon

VRUMOI_RS19160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
gene: tnpA
locus tag: VRUMOI_RS19160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016915975.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MSEEFNKGRHSCYSLHLHLVFVTKYRRKVFGDLHLQSLEATFRELCLGFDAELKEFNGEPDHVHLLISTSPKTPSIAKLVNSLKATSSRRIRREFNDVAGAFGKNVLWSRSYFAGTCGGAPLTVIRQYIEQQDRPH
SIO_010081: VRUMOI_RS19160
subclass of: SO_0000673
so part of: VRUMOI_RS19160
location: 104489..104899
location: region:104489-104899:1
so has part: feature:104489-104899:1:exon

WP_107922914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104489-104899:1:exon

VRUMOI_RS19165
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19165
so part of: sequence
location: 104966..105277
location: region:104966-105277:1
so has part: feature:104966-105277:1:exon
subclass of: SO_0000010

position:104966:1
position: 104966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105277:1
position: 105277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104966-105277:1:exon

VRUMOI_RS19165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19165
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKHLHSQYFVKSIAIKQLKEKVNSLIGLRLPTMPKQGWVRTIREALDMSGAQLGARLGISRNKISILERKEADGSITINQGAVLDNENYLGWFYEKESIKLV
SIO_010081: VRUMOI_RS19165
subclass of: SO_0000673
so part of: VRUMOI_RS19165
location: 104966..105277
location: region:104966-105277:1
so has part: feature:104966-105277:1:exon

WP_089138961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104966-105277:1:exon

VRUMOI_RS19170
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19170
so part of: sequence
location: 105249..105899
location: region:105249-105899:1
so has part: feature:105249-105899:1:exon
subclass of: SO_0000010

position:105249:1
position: 105249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105899:1
position: 105899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105249-105899:1:exon

VRUMOI_RS19170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006248253.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1595 family transposase
translation: MRKSRLSWYKQKRLIELFVAGTTARTASSLVGVNKTTASFYFHRLRMIIFEHQEHMEMFDGEVEADESYFGGQRKGKRGRGAAGKVPVFGLLKRNGKVFTVIIPNAKAETLIPIIREKVKPDSIVYTDTWRSYNALDVSEFKHYRINHSQLFADKTNHINGIENFWSQAKRHMRKFNGVPEEHFYLYLKECEWRFNNSNPKSQLNELTQWVKVSMG
SIO_010081: VRUMOI_RS19170
subclass of: SO_0000673
so part of: VRUMOI_RS19170
location: 105249..105899
location: region:105249-105899:1
so has part: feature:105249-105899:1:exon

WP_089138962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105249-105899:1:exon

VRUMOI_RS19175
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19175
so part of: sequence
location: 105988..106164
location: region:105988-106164:1
so has part: feature:105988-106164:1:exon
subclass of: SO_0000010

position:105988:1
position: 105988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106164:1
position: 106164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105988-106164:1:exon

VRUMOI_RS19175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19175
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEQTIEERAYDLAKNLVDITNQHMFLEMQQLSPEKQNEMIRLLADEIKQSGGRALWKS
SIO_010081: VRUMOI_RS19175
subclass of: SO_0000673
so part of: VRUMOI_RS19175
location: 105988..106164
location: region:105988-106164:1
so has part: feature:105988-106164:1:exon

WP_162598470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105988-106164:1:exon

VRUMOI_RS19180
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19180
so part of: sequence
location: complement(106279..107226)
location: region:106279-107226:-1
so has part: feature:106279-107226:-1:exon
subclass of: SO_0000010

position:106279:-1
position: 106279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107226:-1
position: 107226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106279-107226:-1:exon

VRUMOI_RS19180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012564931.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MNYQQLTEGRRYQISALLERGISVSEIAKTVQCHRSTVYRELKRGRKGRHYCPNEAQMLSIKKRTSARKYRIPQERVDFIRLLLEADWSPEQISSVLTKVGAAVSHEWIYRFVAQDKRLGGKLYRHLRQGHKRYRRGKKEKAPAIKNAVSIDVRPSIVDSKERFGDWEIDTVLGKHGTGAMVTILERKTRFYVVKKVPSKSADDVTKATIELLMPYKEHVHTITADNGREFAGHETIAKELEADVYFAHPYSSWERGANENANGLLRQYVKKGTDLTTVTDSDIEFALSRINYRPRKCLGFKQPAIVFKEMALAA
SIO_010081: VRUMOI_RS19180
subclass of: SO_0000673
so part of: VRUMOI_RS19180
location: complement(106279..107226)
location: region:106279-107226:-1
so has part: feature:106279-107226:-1:exon

WP_041155238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106279-107226:-1:exon

VRUMOI_RS19185
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19185
so part of: sequence
location: complement(107339..108418)
location: region:107339-108418:-1
so has part: feature:107339-108418:-1:exon
subclass of: SO_0000010

position:107339:-1
position: 107339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108418:-1
position: 108418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107339-108418:-1:exon

VRUMOI_RS19185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016800055.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB family protein
translation: MAKKRGAISPLGNTVGSQEAQQGATQVNIDSLSRQLSTEIEKSGQSVEAFLAKQFGIEAVGKSVDWELASGQKATFHELTLSYEQVKNNTFVTFDVNGRDQSLLTKESLQDLDSIQFQQFYPAVGYEVDGKIDVLDGSRRRARFLLEGGKLNQFKILVTKDALSTSDAKALAKQLQTAKEHNLREIGMQCLALKKANVDITQAELAQELGLSQAGVSKAMKAANIDSKLVALFPVTNALSHQDYSILDKVIKAFSDKASLTSFIKTIDKKLVNIQVEYSVEEQKDALLSAIKAELKIAEAKQERDKAEVTPLVEFETKGVFARKRVKGRNFSYEFGRLPKKVQDELDQAITKIISNHNN
SIO_010081: VRUMOI_RS19185
subclass of: SO_0000673
so part of: VRUMOI_RS19185
location: complement(107339..108418)
location: region:107339-108418:-1
so has part: feature:107339-108418:-1:exon

WP_089138964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107339-108418:-1:exon

VRUMOI_RS19190
type: Gene
subclass of: SO_0000704
RO_0002162: 76258
locus tag: VRUMOI_RS19190
so part of: sequence
location: complement(108418..109617)
location: region:108418-109617:-1
so has part: feature:108418-109617:-1:exon
subclass of: SO_0000010

position:109617:-1
position: 109617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108418-109617:-1:exon

VRUMOI_RS19190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 76258
locus tag: VRUMOI_RS19190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006958798.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MDTNHTTQDFQQLKEGADQYIKRRNLRLLANHRKELRNFTRAEASTYLGIDAKTLDKYVASAEIDPRRHDDSQWSIDIEEMYQVRALLPESLRKEIKFERSSKQTAQVIVIQNQKGGVGKTVSAATIASGLATEFHQEYRVGLIDMDGQATLSMYYAPEAAQEGCLSVGDLMMRNFDLDEGETYEQAVSEAFLPTTIPNLRILPASQTDRAIEGWFHEQVFSQQLPSPYSILSTIIDTVKDEFDIIIIDTPPSLGYATYNAYYAATSVVFPLSITENDIDATCSYFSYIPQVWALLKNADHAGYDFMKILLTNHKDSSTTTELMNSLYDHFAPYLYSKEFKNSEAIRQSSSLLSTVFDMSKSEYPKSKSTFQTAQQNSYEVTSQIQRDILSVWREQEQA
SIO_010081: VRUMOI_RS19190
subclass of: SO_0000673
so part of: VRUMOI_RS19190
location: complement(108418..109617)
location: region:108418-109617:-1
so has part: feature:108418-109617:-1:exon

WP_089138965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108418-109617:-1:exon