Leuconostoc kimchii IMSNU 11154 plasmid LkipL4701, complete sequence.
type: Entry
definition: Leuconostoc kimchii IMSNU 11154 plasmid LkipL4701, complete sequence.
sequence version: NC_014131.1
sequence date: 2023-04-11
sequence: sequence
division: CON
label: NC_014131.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02603394
keyword: RefSeq
source: Leuconostoc kimchii IMSNU 11154
organism: Leuconostoc kimchii IMSNU 11154
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Leuconostoc.
reference: 1
references: 20494991
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001753.1.\nStrain IMSNU11154 is available from Jongsik Chun (jchun@snu.ac.kr)\nat Institute of Microbiology, Seoul National University.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/11/2023 01:01:14\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,144\nCDSs (total) :: 2,061\nGenes (coding) :: 2,042\nCDSs (with protein) :: 2,042\nGenes (RNA) :: 83\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 68\nncRNAs :: 3\nPseudo Genes (total) :: 19\nCDSs (without protein) :: 19\nPseudo Genes (ambiguous residues) :: 0 of 19\nPseudo Genes (frameshifted) :: 10 of 19\nPseudo Genes (incomplete) :: 7 of 19\nPseudo Genes (internal stop) :: 4 of 19\nPseudo Genes (multiple problems) :: 2 of 19\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 21055
topology: circular
so has quality: SO_0000988
location: 1..21055
location: region:1-21055:1
RO_0002162: 762051

NC_014131
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02603394
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence analysis of Leuconostoc kimchii IMSNU 11154
author: Oh, H.M.
author: Cho, Y.J.
author: Kim, B.K.
author: Roe, J.H.
author: Kang, S.O.
author: Nahm, B.H.
author: Jeong, G.
author: Han, H.U.
author: Chun, J.
journal: J Bacteriol
volume: 192
issue: 14
pages: 3844-3845
year: 2010
pubmed: 20494991

20494991
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Oh, H.-M.
author: Chun, J.
journal: Submitted (21-SEP-2009) Department of Biological Sciences, Institute of Microbiology, Seoul National University, Seoul 151-742, Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21055:1
position: 21055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21055:1:source
so part of: sequence
organism: Leuconostoc kimchii IMSNU 11154
mol type: genomic DNA
strain: IMSNU 11154
type material: type strain of Leuconostoc kimchii
plasmid: LkipL4701

762051
type: Taxonomy
SIO_000068: taxonomy

LKI_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
locus tag: LKI_RS00005
old locus tag: LKI_10306
so part of: sequence
location: join(20549..21055,1..831)
location: region:1-21055:1
so has part: feature:20549-21055:1:exon
so has part: feature:1-831:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:20549-21055:1:exon

position:20549:1
position: 20549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-831:1:exon

position:831:1
position: 831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LKI_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
locus tag: LKI_RS00005
old locus tag: LKI_10306
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012304813.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MKTYDYTIIGSGPSVYRFLVGMQGSKKRILVVESDNFGGICPNAGCEPKIFLEGAIKTALTSRDLLNKGIESPAKLNWNDLILEKKRVFSPVSTNNQHAYEELGADTVRGTASFVDEHTIKVDETLITSDNFIIATGLKPRPMNIPGSHLFLTSDDFFNMEDLPATVAIIGSGYVGMEIATILSAAGSNVTMLQRSDRPLRDFDSRHVDMLIKNMKENLGIDFRFNTQVTKAEKTSNGILVTTDNGQNLEFSTVINATGRIPNINALNLENTKVDFDKDGVIVDKYLRTTASNIYAIGDVIKKDIPRLTLTAQFEGAYLSAYLLGKKKSEIHYPVIGKVTFTFPQLASTGVDIDQARLDPNLTVKDIDISKGDFLYAGTNDYNAHLSLVYDQNQRIIAASEISQTASDDINIFIPIIALDIDQNLWNEKMVMSFPSLAFKLRNIL
SIO_010081: LKI_RS00005
subclass of: SO_0000673
so part of: LKI_RS00005
location: join(20549..21055,1..831)
location: region:1-21055:1
so has part: feature:20549-21055:1:exon
so has part: feature:1-831:1:exon

WP_012304813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20549-21055:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-831:1:exon

LKI_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
locus tag: LKI_RS00010
old locus tag: LKI_10311
so part of: sequence
location: 978..1634
location: region:978-1634:1
so has part: feature:978-1634:1:exon
subclass of: SO_0000010

position:978:1
position: 978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1634:1
position: 1634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978-1634:1:exon

LKI_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
locus tag: LKI_RS00010
old locus tag: LKI_10311
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012304814.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MVLDIIQYKNSLYDELAHFSKGLASNKRLEILDLLLQASKSVDSISRDTGNSVANTSRHLQVLKESHLVASSRNGNQIIYSLASDNVVSLVRTLMKVGERESSEMKYIQKEADNDQYVKTISLEKVRQEIDNIFLLDVRPKDEYIANHILGAINIPLNELIDNINIIPKNKKIIVYCRGRLCANSNFAVKKLNQYGLNAYSLNSSVHDWQEIAHNSDS
SIO_010081: LKI_RS00010
subclass of: SO_0000673
so part of: LKI_RS00010
location: 978..1634
location: region:978-1634:1
so has part: feature:978-1634:1:exon

WP_012304814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:978-1634:1:exon

LKI_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
locus tag: LKI_RS00015
old locus tag: LKI_10316
so part of: sequence
location: 1674..1994
location: region:1674-1994:1
so has part: feature:1674-1994:1:exon
subclass of: SO_0000010

position:1674:1
position: 1674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1994:1
position: 1994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1674-1994:1:exon

LKI_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
locus tag: LKI_RS00015
old locus tag: LKI_10316
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012304815.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin domain-containing protein
translation: MVKEIELTSENYEESVSKGVILVDFRADWCAPCRMMDSVLDKIAEDPIYESIKFGKVNVDNNMELNIRHSISGIPTFLLYKDGKLITREVGLQTKNTVKSMLNNLL
SIO_010081: LKI_RS00015
subclass of: SO_0000673
so part of: LKI_RS00015
location: 1674..1994
location: region:1674-1994:1
so has part: feature:1674-1994:1:exon

WP_012304815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1674-1994:1:exon

LKI_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
locus tag: LKI_RS00020
old locus tag: LKI_10321
so part of: sequence
location: 2119..2499
location: region:2119-2499:1
so has part: feature:2119-2499:1:exon
subclass of: SO_0000010

position:2119:1
position: 2119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2499:1
position: 2499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2119-2499:1:exon

LKI_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
locus tag: LKI_RS00020
old locus tag: LKI_10321
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013975378.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nuclear transport factor 2 family protein
translation: MKNEHQIKLIETYFKMWIERDFSRINDIFADDIFYRECYGACYRNLKEIHLWITQQLKKQVVLNWSINTVNVDNNSFFVTWIFHAKEENEYIFDGISRIEFNGDSKISKIIEYETKHEIFYPFGKE
SIO_010081: LKI_RS00020
subclass of: SO_0000673
so part of: LKI_RS00020
location: 2119..2499
location: region:2119-2499:1
so has part: feature:2119-2499:1:exon

WP_013102081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2119-2499:1:exon

LKI_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
locus tag: LKI_RS00025
old locus tag: LKI_10326
so part of: sequence
location: 2504..3058
location: region:2504-3058:1
so has part: feature:2504-3058:1:exon
subclass of: SO_0000010

position:2504:1
position: 2504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3058:1
position: 3058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2504-3058:1:exon

LKI_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
locus tag: LKI_RS00025
old locus tag: LKI_10326
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015474649.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MKYGYARVSTIDQKLENQIESLKNSGAEIIYKEKFTGTTTERPEFNKVLNELKTDDTLIVTKLDRFARNTKEALDIIQDLFKRNIKVNILNMGIIDNTPTGQLIFTIFSAFAQFERDMIVTRTHEGKEYAKRNDPYFSEGRPQTYTDEQIRLAYDLRQQGMTYKMIARKTGISERTQQRRFKDI
SIO_010081: LKI_RS00025
subclass of: SO_0000673
so part of: LKI_RS00025
location: 2504..3058
location: region:2504-3058:1
so has part: feature:2504-3058:1:exon

WP_013102082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2504-3058:1:exon

LKI_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
locus tag: LKI_RS00030
old locus tag: LKI_10331
so part of: sequence
location: complement(3219..4025)
location: region:3219-4025:-1
so has part: feature:3219-4025:-1:exon
subclass of: SO_0000010

position:3219:-1
position: 3219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4025:-1
position: 4025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3219-4025:-1:exon

LKI_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
locus tag: LKI_RS00030
old locus tag: LKI_10331
inference: COORDINATES: protein motif:HMM:NF033516.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MGLPLVNQFLAQGYALVRILNALKIRSSTYYNWRHWQPSRQEKRRESLKPYILDVWKTFKFYGYRRIAAYSQQTDGAKVSEYMTLQLMRELGIRSRMQKCYRKPKTVVTVDQKPNLIRHLHDLSGVWQTDITYIQLTNHRWVYLATVLDPEKRKVLGYKIGDTMTAELATSALQMALDKHRKPLIIHSDMGSQYTSAEFNIKCQNYGLKHSYSLKGHPYDNGRMEAFHSILKREEVYLKAYQTLTEVQAAIGWYINFFYNRNRISNVA
SIO_010081: LKI_RS00030
subclass of: SO_0000673
so part of: LKI_RS00030
location: complement(3219..4025)
location: region:3219-4025:-1
so has part: feature:3219-4025:-1:exon

WP_167524327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3219-4025:-1:exon

LKI_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
locus tag: LKI_RS00035
old locus tag: LKI_10336
so part of: sequence
location: complement(4071..4313)
location: region:4071-4313:-1
so has part: feature:4071-4313:-1:exon
subclass of: SO_0000010

position:4071:-1
position: 4071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4313:-1
position: 4313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4071-4313:-1:exon

LKI_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
locus tag: LKI_RS00035
old locus tag: LKI_10336
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010277795.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MSIRYSQDFKDSLVKLHQEGRSLKSLADEFGPSKDSIAIWVKQATPVMIQGQSKTLKDVKQLEKRLAILEEENEILSRIA
SIO_010081: LKI_RS00035
subclass of: SO_0000673
so part of: LKI_RS00035
location: complement(4071..4313)
location: region:4071-4313:-1
so has part: feature:4071-4313:-1:exon

WP_012304818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4071-4313:-1:exon

LKI_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
locus tag: LKI_RS00040
old locus tag: LKI_10341
so part of: sequence
location: complement(4445..4630)
location: region:4445-4630:-1
so has part: feature:4445-4630:-1:exon
subclass of: SO_0000010

position:4445:-1
position: 4445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4630:-1
position: 4630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4445-4630:-1:exon

LKI_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
locus tag: LKI_RS00040
old locus tag: LKI_10341
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004903681.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADKNIFEKLFLEAEKTNLQVLMDIALNEKDPDKKELLMAIYTYAIGKKQKELLKNKEFVI
SIO_010081: LKI_RS00040
subclass of: SO_0000673
so part of: LKI_RS00040
location: complement(4445..4630)
location: region:4445-4630:-1
so has part: feature:4445-4630:-1:exon

WP_013102083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4445-4630:-1:exon

LKI_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
gene: mobV
locus tag: LKI_RS00045
old locus tag: LKI_10346
so part of: sequence
location: 5046..6281
location: region:5046-6281:1
so has part: feature:5046-6281:1:exon
subclass of: SO_0000010

position:5046:1
position: 5046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6281:1
position: 6281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5046-6281:1:exon

LKI_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
gene: mobV
locus tag: LKI_RS00045
old locus tag: LKI_10346
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004906025.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobV family relaxase
translation: MAHLKKNTRGAVPGLAVHFERKTDHHTNKEIDVSKSYLNQDLMADGSDMVSRFNARLNDVYCMKRDDVKALATWIVTLPEELTEAPYEQQSAFFEATTNFLNDRYGQKNAVAAVVHYDETTPHLHYAFVPVVFDDKKSRYKVSAKEVLTRHDLQTFHEDLDQDLKKVLPFYEQGILNNKTLPFENVAEIKKYNDQFNALKNELADVEDNIRAKQAVLKITDQALTEVDLAEKQIDAFKQDLSKNIFGKTVLKPDDLDRFKNVLATMKKATLQSQHETEELKQTLGQVQAQLGDVQADYQNLKETHQALQKRQREQQQLDYAMRDMLKNDYGVDKLSHTDMEARSVLYKLDHEELTQNKKVAQSWLKTLTTARADPDTKIAPTRLDRGIEQVKALINRIIELTRDIFKGPSL
SIO_010081: LKI_RS00045
subclass of: SO_0000673
so part of: LKI_RS00045
location: 5046..6281
location: region:5046-6281:1
so has part: feature:5046-6281:1:exon

WP_013102084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5046-6281:1:exon

LKI_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
locus tag: LKI_RS00050
old locus tag: LKI_10351
so part of: sequence
location: 6783..7937
location: region:6783-7937:1
so has part: feature:6783-7937:1:exon
subclass of: SO_0000010

position:6783:1
position: 6783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7937:1
position: 7937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6783-7937:1:exon

LKI_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
locus tag: LKI_RS00050
old locus tag: LKI_10351
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014335299.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RepB family plasmid replication initiator protein
translation: MSIIPESKTRQVHTLNELSKRKVVEHNSLITSIAKMDKTPLKMFELAVSLIDTDNPPQDQTVYLSKQEMFAFFKVNDNDKNSRFKQAIEKMQKQAFFQIKKEQDKGFKFVSIVPIPYVEWTDYSDEVKIEFHREIMPYLINLKTNFTQHALSDIAELNSKYAIILYRWLSMNYNQYDHYSVKGGRREEQVESYRNPKIGIRELREMTDTVNEYQRFDRFESYILKNSLKEINAHTTFNVTHEKVKKGRSIDSIVFHITKKQVADDISYKLDDPTYIDGKIRQEESEKDLVYEAMKSPYTKLLMEHFLLTYIDLTDTTILSGLQKNVYPLYDELKELRGLKGVKEHLAYIRDKQDDYSKKNIAKYLKKSIEQYLPIVKRQDIDHE
SIO_010081: LKI_RS00050
subclass of: SO_0000673
so part of: LKI_RS00050
location: 6783..7937
location: region:6783-7937:1
so has part: feature:6783-7937:1:exon

WP_013102085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6783-7937:1:exon

LKI_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
locus tag: LKI_RS00055
old locus tag: LKI_10356
so part of: sequence
location: 7930..8493
location: region:7930-8493:1
so has part: feature:7930-8493:1:exon
subclass of: SO_0000010

position:7930:1
position: 7930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8493:1
position: 8493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7930-8493:1:exon

LKI_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
locus tag: LKI_RS00055
old locus tag: LKI_10356
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016628117.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSENLKTIRELADELGVSKKKIHYQVSKLDSNLIQRLDGTIYLGKTAISKIKSSIGYSKVSELDTLNIQNRHELDSRLDTEKNELINEKSEQISYLKEQLNKKDGQLAIKDEQIKSLVEIQNQTQNLLDQQQRLALQDKKLLEEYKSEIQSLKALTTEDNKAHAEEHSEDANIGVKDKSKRWWHFGK
SIO_010081: LKI_RS00055
subclass of: SO_0000673
so part of: LKI_RS00055
location: 7930..8493
location: region:7930-8493:1
so has part: feature:7930-8493:1:exon

WP_013102086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7930-8493:1:exon

LKI_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
locus tag: LKI_RS00060
old locus tag: LKI_10361
so part of: sequence
location: 8527..11721
location: region:8527-11721:1
so has part: feature:8527-11721:1:exon
subclass of: SO_0000010

position:8527:1
position: 8527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11721:1
position: 11721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8527-11721:1:exon

LKI_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
locus tag: LKI_RS00060
old locus tag: LKI_10361
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003725277.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helicase-related protein
translation: MKNFDNVNERVIDDLRQEIKSHSKIKIAAASFSIYAYEALKTELEKTDAVQFLFTSNLFTKEKVPNEKREFFIPRLNRESQLYRDGFELKIRNELSQKAIAKEVAEWIEHRVTFKSNISGKQSDNFMIINSKNDTNVYLPIDEFTTSELGVSQGEKLFYNISKFENENTQRFLNAFDQVWNNPDYVDEVTNTVLDNITAAYQENAPEFIYYLALYNIFSEFLSDLDAEYLPDERTGFKESKIWSLLYDFQKDAVVGAISKLEKHNGVILADSVGLGKTFSAIGVIKYYESRNKNVLVLSPKRLKDNWNNYKNNYKNNPLAEDRLRYDVLFHTDMDREQGESNGIDLGKINWGNYDLVVIDESHNFRNGDGTTHKKNDGSENRYQKLMRKIIKTGVKTKVLMLSATPVNTDFSDLRNQLMLSAEGDSDTLTQSLNTKNSVTEIFAQAQRAFKEWSQLDVSNRTTEQLLDMLDFDFFELLDSVTIARSRKHIQKYYDKEAIGNFPKRLTPINKSPKLTDLDISYNQIFLFIDRLNLEVYNPLQYVYPSKISKYIDESRPNAASWGNREKGRNQLMVTNLLKRAESSIYSFRLTSERILSNIDHKLQTIANYEKYKQGIIENIEDDFEEDTFTVGKDLKIDLADMDYRSWREKLLVDQNVFMELLNLIQVITPDHDAKLSELTALIRNKIEHPINANNHKIIIFTAFSDTADYLYNYLSDRLNQVGNLHTALISGSRTATTVSDVGNDFNTLLTLFSPKSKNRDALGLHGEIDVIIATDVISEGQNLQDADYLINYDIHWNPVRIIQRFGRIDRIGSTNDVIQMVNFWPDISLDEYINLKARVENRAKLVAVSSTGEDTIDNTDPDMAYRKKQLETLQNEVVDLEDMSSGVNIMDLGLNEFQLDLQKLREKYGDYEAKPYGIHAITQSDNNHPAGVIFVLKNHNNAMNIDKQNRLHPFYLVYIDENGEVVSSHFNPKKVLDDMRYLSKDRSLPIENLTQSFNIETREGKEMSKYSNLLNQAIDSMINGKKEKDIDSLFTTGGTTALENDISGLNDFELIDFLVVRGE
SIO_010081: LKI_RS00060
subclass of: SO_0000673
so part of: LKI_RS00060
location: 8527..11721
location: region:8527-11721:1
so has part: feature:8527-11721:1:exon

WP_013102087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8527-11721:1:exon

LKI_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
locus tag: LKI_RS00065
old locus tag: LKI_10366
so part of: sequence
location: 11722..12279
location: region:11722-12279:1
so has part: feature:11722-12279:1:exon
subclass of: SO_0000010

position:11722:1
position: 11722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12279:1
position: 12279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11722-12279:1:exon

LKI_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
locus tag: LKI_RS00065
old locus tag: LKI_10366
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003725278.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIVDIPKQAVVNRIIPKDRFNFEDAKKIERIRWVGKLAPNTINLPAKKIQEIEVFSVEMPDFDLNVIKEIVTKIPQEILFIVNGELGIMYYLDQFISKKVADKLQLNGLSIDDVRDNFIRQLLDITDISKSLKQQVEKIQLMHELESEIDRINNKIKRTVQINKKQLLARERYALEQRLAKVKGE
SIO_010081: LKI_RS00065
subclass of: SO_0000673
so part of: LKI_RS00065
location: 11722..12279
location: region:11722-12279:1
so has part: feature:11722-12279:1:exon

WP_013102088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11722-12279:1:exon

LKI_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
locus tag: LKI_RS00070
old locus tag: LKI_10371
so part of: sequence
location: 12283..14142
location: region:12283-14142:1
so has part: feature:12283-14142:1:exon
subclass of: SO_0000010

position:12283:1
position: 12283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14142:1
position: 14142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12283-14142:1:exon

LKI_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
locus tag: LKI_RS00070
old locus tag: LKI_10371
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002410913.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA methyltransferase
translation: MPDIPEKINLSNVNSRQVNPELLNELRDLFFKAEEQKERYDFTWNGKAKSYFEAAAPTTKTLRAQPEESVNFEKSENLFITGDNLEALKLLQESYLGKIDMIYIDPPYNTGKDFVYQDNFKKTQKENDLSEGIIDEEGNRLVKNEKSNGRYHSDWLTMMYPRLKLARNLLSDTGVIFVSIDDNEQANLKLLMDEIFGEDNFVNRFTWVNKKEGRSLKSKGAKSTSELIYAYAKNIQLINEFSANTQDLNKLMPTIYSDTNNKISFDDKGPYLATHELYNGNSAFNEETRPNLVFNIWYREEDKSVVFENPYSQSYVLITPHKNSDGRHKYHAYRWSQEKIKNEIDDLLFVKYNDTYKIFTKRREFANTVIKDLITDIPTNQGTRDLRKLGINEFDFPKPVSLIKFLIQISSQYNSTILDFFAGSGTTAESVMAINQQDQGSRNYILITLDELLDQENKYTTIDQISRERIRRAAKKISDTSGFRALKVDSTGLKEDVFKTAGELDQVDLLQDIDNHSDNRSDYDLLYDVLVDGALEYNRPITIDTMNDEQIIKYDYLGELSGVVCYFGENLTDELTRQIATLKPLIAVFKESTFDKSAQKVNVMEQFRIISPDTKVKVI
SIO_010081: LKI_RS00070
subclass of: SO_0000673
so part of: LKI_RS00070
location: 12283..14142
location: region:12283-14142:1
so has part: feature:12283-14142:1:exon

WP_013102089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12283-14142:1:exon

LKI_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
locus tag: LKI_RS00075
old locus tag: LKI_10376
so part of: sequence
location: 14177..17293
location: region:14177-17293:1
so has part: feature:14177-17293:1:exon
subclass of: SO_0000010

position:14177:1
position: 14177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17293:1
position: 17293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14177-17293:1:exon

LKI_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
locus tag: LKI_RS00075
old locus tag: LKI_10376
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003725281.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
translation: MKLQYKNQPFQLEAVESVIATFEGQPRKNNMSYMMDMGHEKNVSLDIVNGFKNADITLSESDLLKNIQVTQKNNGLVTDTQLVKMAIGGRDKSTKIDNSRDILTLSVEMETGTGKTYTYIKTMLELNKQYGWSKFIIVVPSVAIREGIAKTFESTAEHFKQAYGVGVRYFIYHSSHLDQIEAFASDAGINVMIVNTQAFNARGADARRIDMVLDQFRGRRPIDVISATHPIMIIDEPQSVLGNGSKADLNATRVGLAKFNPLFFINYSATHRDNYNMIYRLDAVDAYQKNLVKKIAVKGIEISGSNASSGYLYIEAIKEQPTLKVRIQFDKLSATGSVVKTSKLLDKGDNIYPISGEIESYKSGFIISEINAVEQFVEFTNGMRLSVGEVVGNTNEEDLRRIQIRETIQSHFAKEEILFKRGIKTLSLFFIDEVSKYKNYDAIDDKGIYATIFEEEYLNIARDRLADSLLDANYRSYLERELKSPEKVHAGYFSIDKKGKAVDSKIKRGSESSDDISAYDLIMKNKERLLSFEEPVRFIFSHSALKEGWDNPNVFQIATLRQSSSDIKKRQEIGRGLRLAVNQNGDRQDAQYLGENEVKQVNVLTVIANESYETFARGLQSEISDAIKNRPKFIEPKLFEGRELVVEDSTGQVTDRILVDNTQAAEIWSSLKSGMLIDKNKQSSDTYKNLSAPEQLAAIQDALDDDLKIFALPIQNLINSVYSPKDLPIDNENKRTTLKLNREKYASTEFKSLWSKINRKSYYTVDFDDQEIIEKSIQLINKNLTVKTLKARITEGNMSANDTGTSFTVNDKRTTDIDRPVNHVKYDLIGEVSQNVGLLRKTVGYILTGIHSGQFAKYQSNPENFIVQISNIINAVKAQNIISHIVYNKLDEVWDEDAIFANNDIQGIMGQNVFDAKKHLYDKVRVDSEVEKRFASELDVEQNVEMYVKLPGGFYINTPVGKYNPDWAIVLNEPDQKHVYFIAETKGVSENIELSLKGVENAKIESARQHFKIISNSEVTYDVVDSYEKMMDKLSSNI
SIO_010081: LKI_RS00075
subclass of: SO_0000673
so part of: LKI_RS00075
location: 14177..17293
location: region:14177-17293:1
so has part: feature:14177-17293:1:exon

WP_013102090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14177-17293:1:exon

LKI_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
gene: trxA
locus tag: LKI_RS00080
old locus tag: LKI_10386
so part of: sequence
location: 18104..18415
location: region:18104-18415:1
so has part: feature:18104-18415:1:exon
subclass of: SO_0000010

position:18104:1
position: 18104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18415:1
position: 18415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18104-18415:1:exon

LKI_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
gene: trxA
locus tag: LKI_RS00080
old locus tag: LKI_10386
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010054034.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin
translation: MVENLTYENFDISTSEGVVLTDFWAEWCAPCRMQSPIIDQLDDEIGNQVKFTKVDVDNNQQVATSLGIRSIPTLVVKKNGEIVEKLVGFHTKDQLKKVLAYYA
SIO_010081: LKI_RS00080
subclass of: SO_0000673
so part of: LKI_RS00080
location: 18104..18415
location: region:18104-18415:1
so has part: feature:18104-18415:1:exon

WP_013102092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18104-18415:1:exon

LKI_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
locus tag: LKI_RS00085
old locus tag: LKI_10391
so part of: sequence
location: 18440..18766
location: region:18440-18766:1
so has part: feature:18440-18766:1:exon
subclass of: SO_0000010

position:18440:1
position: 18440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18766:1
position: 18766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18440-18766:1:exon

LKI_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
locus tag: LKI_RS00085
old locus tag: LKI_10391
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012304810.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin family protein
translation: MEKVFYNSFNELKHKIKNGKYVLVFTADWCGDCKFIEPVLPEIENTFREYQFINIDTDKNMHIARSLNIFGIPSFVVYDSGKEIDRLVNKDRKTKNEIISFIDQAIER
SIO_010081: LKI_RS00085
subclass of: SO_0000673
so part of: LKI_RS00085
location: 18440..18766
location: region:18440-18766:1
so has part: feature:18440-18766:1:exon

WP_012304810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18440-18766:1:exon

LKI_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
gene: trxB
locus tag: LKI_RS00090
old locus tag: LKI_10396
so part of: sequence
location: 18774..19703
location: region:18774-19703:1
so has part: feature:18774-19703:1:exon
subclass of: SO_0000010

position:18774:1
position: 18774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19703:1
position: 19703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18774-19703:1:exon

LKI_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
gene: trxB
locus tag: LKI_RS00090
old locus tag: LKI_10396
EC number: 1.8.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012304811.1
GO function: GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin-disulfide reductase
translation: MLEYDVIVIGAGPGGMTASLYAARANLKVAMIDRGVYGGQMNNTDDIENYPGFPTIKGPDLGEKMYQNTVNAGVEFIFGDVQEVTVDDNQYKHVKTDSEDLVSKVVIIATGSNNRKLGIPGEKEFSGKGVSYCAVCDGAFFKNENVTVVGGGDSAISEGTYLANITDHVGIVHHRDKLRAQKVLQDRAFSNNKIDFTWNSNVVEIVGDDNRVTGIKMVDNQSGKLTTVDTTGVFIYIGNIPNTQMFSNLNITDESGWIITNSEMETNIPGIFAIGDVRLKKLRQITTAVGDGGIAGQNSFEYIEQFNEK
SIO_010081: LKI_RS00090
subclass of: SO_0000673
so part of: LKI_RS00090
location: 18774..19703
location: region:18774-19703:1
so has part: feature:18774-19703:1:exon

WP_012304811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18774-19703:1:exon

LKI_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
locus tag: LKI_RS00095
old locus tag: LKI_10401
so part of: sequence
location: 19713..20372
location: region:19713-20372:1
so has part: feature:19713-20372:1:exon
subclass of: SO_0000010

position:19713:1
position: 19713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20372:1
position: 20372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19713-20372:1:exon

LKI_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
locus tag: LKI_RS00095
old locus tag: LKI_10401
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012304812.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DsbA family oxidoreductase
translation: MEIKYWSDIACPFCYIGSNRMKRAMKELGIYNTTELEFKSFELDPTTSKETTEGYINHFTQGNKSMEDQAKQQMAYIEKMAHDDGLSMDINSVIPTNTVDAHRLIKLANSKHDPVLTENLIRRFYQVYFNDGRSIADHNVLVNAATEVGLYKDEVEVILNSDKYFQEVKADEIEAMQSGIHAAPFFVINNKYGINGAQPYEVFINALKQVQDEEDKAKG
SIO_010081: LKI_RS00095
subclass of: SO_0000673
so part of: LKI_RS00095
location: 19713..20372
location: region:19713-20372:1
so has part: feature:19713-20372:1:exon

WP_012304812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19713-20372:1:exon

LKI_RS11150
type: Gene
subclass of: SO_0000704
RO_0002162: 762051
locus tag: LKI_RS11150
old locus tag: LKI_10406
so part of: sequence
location: 20389..20520
location: region:20389-20520:1
so has part: feature:20389-20520:1:exon
subclass of: SO_0000010

position:20389:1
position: 20389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20520:1
position: 20520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20389-20520:1:exon

LKI_RS11150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 762051
locus tag: LKI_RS11150
old locus tag: LKI_10406
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004909440.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKEQKMTFQTFGVTNDVDVCGPDGCIIADHHKQVTEEENKDK
SIO_010081: LKI_RS11150
subclass of: SO_0000673
so part of: LKI_RS11150
location: 20389..20520
location: region:20389-20520:1
so has part: feature:20389-20520:1:exon

WP_013102093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20389-20520:1:exon