Runella slithyformis DSM 19594 plasmid pRUNSL04, complete sequence.
type: Entry
definition: Runella slithyformis DSM 19594 plasmid pRUNSL04, complete sequence.
sequence version: NC_015705.1
sequence date: 2022-10-06
sequence: sequence
division: CON
label: NC_015705.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02232050
keyword: GSC:MIGS:2.1
keyword: RefSeq
source: Runella slithyformis DSM 19594
organism: Runella slithyformis DSM 19594
taxonomy: Bacteria; Bacteroidota; Cytophagia; Cytophagales; Spirosomaceae; Runella.
reference: 1
references: 22768358
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP002863.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4087357\nSource DNA and organism available from Hans-Peter Klenk at the\nGerman Collection of Microorganisms and Cell Cultures (DSMZ)\n(hans-peter.klenk@dsmz.de)\nContacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)\n David Bruce (microbe@cuba.jgi-psf.org)\nWhole genome sequencing and draft assembly at JGI-PGF\nFinishing done by JGI-LANL\nAnnotation by JGI-ORNL and JGI-PGF\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##MIGS-Data-START##\ninvestigation_type :: bacteria_archaea\nproject_name :: Runella slithyformis LSU4, DSM 19594\ncollection_date :: Missing\nlat_lon :: 30.46788 -91.129604\ndepth :: Missing\nalt_elev :: Missing\ncountry :: USA\nenvironment :: Fresh water, Host\nnum_replicons :: 6\nref_biomaterial :: DSM 19594, ATCC 29530, LMG 11500, NCIMB\n 11436\nbiotic_relationship :: Free living\ntrophic_level :: Missing\nrel_to_oxygen :: Missing\nisol_growth_condt :: Missing\nsequencing_meth :: WGS\nassembly :: Newbler v. 2.3 (pre-release)\nfinishing_strategy :: Finished\nGOLD Stamp ID :: Gi04364\nType Strain :: Yes\nFunding Program :: DOE-GEBA 2009\nGene Calling Method :: Prodigal 1.4, GenePRIMP\nIsolation Site :: Fresh water lake; USA, Louisiana, Baton\n Rouge\nIsolation Comments :: isolated by JM Larkin for Louisiana State\n Univ\nCell Shape :: Rod-shaped\nMotility :: Nonmotile\nTemperature Range :: Psychrophil…

sequence
subclass of: SO_0000155
sequence length: 44754
topology: circular
so has quality: SO_0000988
location: 1..44754
location: region:1-44754:1
RO_0002162: 761193

NC_015705
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02232050
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4(T))
author: Copeland, A.
author: Zhang, X.
author: Misra, M.
author: Lapidus, A.
author: Nolan, M.
author: Lucas, S.
author: Deshpande, S.
author: Cheng, J.F.
author: Tapia, R.
author: Goodwin, L.A.
author: Pitluck, S.
author: Liolios, K.
author: Pagani, I.
author: Ivanova, N.
author: Mikhailova, N.
author: Pati, A.
author: Chen, A.
author: Palaniappan, K.
author: Land, M.
author: Hauser, L.
author: Pan, C.
author: Jeffries, C.D.
author: Detter, J.C.
author: Brambilla, E.M.
author: Rohde, M.
author: Djao, O.D.
author: Goker, M.
author: Sikorski, J.
author: Tindall, B.J.
author: Woyke, T.
author: Bristow, J.
author: Eisen, J.A.
author: Markowitz, V.
author: Hugenholtz, P.
author: Kyrpides, N.C.
author: Klenk, H.P.
author: Mavromatis, K.
journal: Stand Genomic Sci
volume: 6
issue: 2
pages: 145-154
year: 2012
pubmed: 22768358

22768358
type: PubMed
SIO_000068: pubmed

2
title: The complete genome of plasmid 4 of Runella slithyformis DSM 19594
author: Lucas, S.
author: Han, J.
author: Lapidus, A.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Peters, L.
author: Kyrpides, N.
author: Mavromatis, K.
author: Ivanova, N.
author: Ovchinnikova, G.
author: Zhang, X.
author: Misra, M.
author: Detter, J.C.
author: Tapia, R.
author: Han, C.
author: Land, M.
author: Hauser, L.
author: Markowitz, V.
author: Cheng, J.-F.
author: Hugenholtz, P.
author: Woyke, T.
author: Wu, D.
author: Tindall, B.
author: Faehrich, R.
author: Brambilla, E.
author: Klenk, H.-P.
author: Eisen, J.A.
journal: Unpublished

3
title: Direct Submission
author: Lucas, S.
author: Han, J.
author: Lapidus, A.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Peters, L.
author: Kyrpides, N.
author: Mavromatis, K.
author: Ivanova, N.
author: Ovchinnikova, G.
author: Zhang, X.
author: Misra, M.
author: Detter, J.C.
author: Tapia, R.
author: Han, C.
author: Land, M.
author: Hauser, L.
author: Markowitz, V.
author: Cheng, J.-F.
author: Hugenholtz, P.
author: Woyke, T.
author: Wu, D.
author: Tindall, B.
author: Faehrich, R.
author: Brambilla, E.
author: Klenk, H.-P.
author: Eisen, J.A.
journal: Submitted (08-JUN-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44754:1
position: 44754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-44754:1:source
so part of: sequence
organism: Runella slithyformis DSM 19594
mol type: genomic DNA
strain: DSM 19594
isolation source: fresh water lake
culture collection: DSM:19594
type material: type strain of Runella slithyformis
plasmid: pRUNSL04
country: USA
lat lon: 30.46788 N 91.129604 W
collected by: JM Larkin

761193
type: Taxonomy
SIO_000068: taxonomy

RUNSL_RS28865
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28865
old locus tag: Runsl_5768
so part of: sequence
location: complement(296..1468)
location: region:296-1468:-1
so has part: feature:296-1468:-1:exon
subclass of: SO_0000010

position:296:-1
position: 296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1468:-1
position: 1468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296-1468:-1:exon

RUNSL_RS28865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28865
old locus tag: Runsl_5768
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013930358.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MIERQQTNYLLNLLEHFPVVSIIGPRQVGKTTLVKLIQTKLQKESIYLDLQKDSDSDRLENAERFLKSQLDRCVIIDEIQLKPKLFSLIRALVDEYRIPARFIILGSASPMLLKNSAESLAGRVASVELAPFTLPEVTKNGISLDDHWFYGGYPEPLLKPKSFFTSTWLTEYIETFVYRDLTILGFDVAPKTLSRLLSMLATTQGGILNMSDFGRSIGVSHNTVKRYLDLLEGGFITSRLEPYYTNIGKRLIKAPKIYIRDSGILHKLLRINSHYDLLGHMILGHSWEGYVIEQIRRVTGKEWEFYFYRTHSGAEADLVLISPNGKKTCIEIKYSSSPKVSKGFHETIKDLAPDFKYIIIPEGEQYVKDEDIIVCSMYEFLEKELDRIQA
SIO_010081: RUNSL_RS28865
subclass of: SO_0000673
so part of: RUNSL_RS28865
location: complement(296..1468)
location: region:296-1468:-1
so has part: feature:296-1468:-1:exon

WP_013931292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296-1468:-1:exon

RUNSL_RS28870
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28870
old locus tag: Runsl_5769
so part of: sequence
location: complement(2100..2879)
location: region:2100-2879:-1
so has part: feature:2100-2879:-1:exon
subclass of: SO_0000010

position:2100:-1
position: 2100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2879:-1
position: 2879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2100-2879:-1:exon

RUNSL_RS28870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28870
old locus tag: Runsl_5769
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009579784.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyl transferase AbiEii/AbiGii toxin family protein
translation: MITLEAIKKYYPAHLHGFERELLREYLQCQILQILFDSPLGKHFAFLGGTCLRLVHENKRFSEDLDFDNFAVSAAQFDQVAEIVEKELKGSGYEVEIQIVGKGAYRCNVKFPRLFYQHGLSGYREEKLLIQLDSEAQNFPFEKETYILNRFGIFSQINITPLNLMFSQKCYAILNRPPNKGRDFFDVVFLLGLNVKPNYAYLEQKVGITTAAQLKERLLAHCEKLNMEEQGRDVAAFLFPPNDIRMVTLFPQIIKQAII
SIO_010081: RUNSL_RS28870
subclass of: SO_0000673
so part of: RUNSL_RS28870
location: complement(2100..2879)
location: region:2100-2879:-1
so has part: feature:2100-2879:-1:exon

WP_013931293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2100-2879:-1:exon

RUNSL_RS29970
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS29970
old locus tag: Runsl_5770
so part of: sequence
location: complement(2876..3490)
location: region:2876-3490:-1
so has part: feature:2876-3490:-1:exon
subclass of: SO_0000010

position:2876:-1
position: 2876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3490:-1
position: 3490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2876-3490:-1:exon

RUNSL_RS29970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS29970
old locus tag: Runsl_5770
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNFISFQKAFQERDVIPVNDILKQFPDFDTRRLVEWQDKQYLQKLINKYYTWPQKPISESRLFFTANRLCSNSYVSLWSALRWYGFIPEGVYQVFSVSSKQTRRFETVLGRFNYHHLKPDLLFGYEPQRLENRDFLMAEPEKALLDTFYLNPSLKGELDLEAMRLNLDLITERCSAEKLTTYADAIGNKRVSRLTSILLRQLPQ
SIO_010081: RUNSL_RS29970
subclass of: SO_0000673
so part of: RUNSL_RS29970
location: complement(2876..3490)
location: region:2876-3490:-1
so has part: feature:2876-3490:-1:exon

WP_013931294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2876-3490:-1:exon

RUNSL_RS28880
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28880
old locus tag: Runsl_5771
so part of: sequence
location: complement(3572..3844)
location: region:3572-3844:-1
so has part: feature:3572-3844:-1:exon
subclass of: SO_0000010

position:3572:-1
position: 3572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3844:-1
position: 3844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3572-3844:-1:exon

RUNSL_RS28880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28880
old locus tag: Runsl_5771
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLKRWKLYVKPRPSPSSNCSARKRRNLKTDQVTKIVNEAIRKSRLANPGGVVRETQVYYLSGKVTTISTKAELEAYLLTTKTELLRLLQ
SIO_010081: RUNSL_RS28880
subclass of: SO_0000673
so part of: RUNSL_RS28880
location: complement(3572..3844)
location: region:3572-3844:-1
so has part: feature:3572-3844:-1:exon

WP_013931295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3572-3844:-1:exon

RUNSL_RS29975
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS29975
so part of: sequence
location: 4073..4588
location: region:4073-4588:1
so has part: feature:4073-4588:1:exon
subclass of: SO_0000010

position:4073:1
position: 4073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4588:1
position: 4588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4073-4588:1:exon

RUNSL_RS29975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS29975
inference: COORDINATES: protein motif:HMM:NF012385.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-54 factor interaction domain-containing protein
translation: MKPVYQRAYRIVQADGITTLIPGATGTGKEHLARYIHTNSARHAAAFVSVNCSAFTDSLLESRLFGHKKGSFTGADADHQGFFEQAEGGTLFLDEIGDIPSYMPQTLLRVLQEKEILPMGGKAKKVNVRVIAATHPNLHECCEKGTFRWALILPPYRGRNSAAELSRTGKD
SIO_010081: RUNSL_RS29975
subclass of: SO_0000673
so part of: RUNSL_RS29975
location: 4073..4588
location: region:4073-4588:1
so has part: feature:4073-4588:1:exon

WP_169705262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4073-4588:1:exon

RUNSL_RS31175
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS31175
so part of: sequence
location: 4779..4958
location: region:4779-4958:1
so has part: feature:4779-4958:1:exon
subclass of: SO_0000010

position:4779:1
position: 4779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4958:1
position: 4958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4779-4958:1:exon

RUNSL_RS31175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS31175
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPEWFLQAASPKSLRWKDVEKAHLQKVLQLVNGNQRKALQLFGYDSMNTLVAKIKEYFI
SIO_010081: RUNSL_RS31175
subclass of: SO_0000673
so part of: RUNSL_RS31175
location: 4779..4958
location: region:4779-4958:1
so has part: feature:4779-4958:1:exon

WP_169705264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4779-4958:1:exon

RUNSL_RS28890
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28890
old locus tag: Runsl_5773
so part of: sequence
location: 5120..5719
location: region:5120-5719:1
so has part: feature:5120-5719:1:exon
subclass of: SO_0000010

position:5120:1
position: 5120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5719:1
position: 5719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5120-5719:1:exon

RUNSL_RS28890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28890
old locus tag: Runsl_5773
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019990976.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKIITIAHQKGGVGKTTLALNLGYCLQNSVRVAILDSDPQGSISGLGELVGLKGIDLLPIDEIANAGTNYDVAIIDTPPYLSNKLPEFFQLSDFVLVPTKAGVLDVMAIKATIALLKQAQTKRPNLKAAIVLNMIQHRTSLTDDIKQLLEQYEMPILNTMISQRVSYARSPITGGVFETDDDKAQQEIFNLTKEILEYL
SIO_010081: RUNSL_RS28890
subclass of: SO_0000673
so part of: RUNSL_RS28890
location: 5120..5719
location: region:5120-5719:1
so has part: feature:5120-5719:1:exon

WP_013931296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5120-5719:1:exon

RUNSL_RS28895
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28895
old locus tag: Runsl_5774
so part of: sequence
location: 5774..6055
location: region:5774-6055:1
so has part: feature:5774-6055:1:exon
subclass of: SO_0000010

position:5774:1
position: 5774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6055:1
position: 6055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5774-6055:1:exon

RUNSL_RS28895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28895
old locus tag: Runsl_5774
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKDNFKNQLASLGGKLKEKEDTTPLQEITPIQNRSKSEAEKTPKAEETKFTVHIPTDLMDTIKELGFKKKKKIKALFVEALEEYAQKHKLSE
SIO_010081: RUNSL_RS28895
subclass of: SO_0000673
so part of: RUNSL_RS28895
location: 5774..6055
location: region:5774-6055:1
so has part: feature:5774-6055:1:exon

WP_013931297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5774-6055:1:exon

RUNSL_RS28900
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28900
old locus tag: Runsl_5775
so part of: sequence
location: 6701..8065
location: region:6701-8065:1
so has part: feature:6701-8065:1:exon
subclass of: SO_0000010

position:6701:1
position: 6701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8065:1
position: 8065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6701-8065:1:exon

RUNSL_RS28900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28900
old locus tag: Runsl_5775
inference: COORDINATES: protein motif:HMM:NF013235.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MSKKIRKSYVKEDVRFIKKANELVEARYKFDIWETRIFAITLSMIHPSDADFKEYKINVGQVIEEFGLSKGGEIYQFLREAALNLQKKIIAIQSERDGLKTELTIPLFTGIERVIDERAKKDAEKSIWVTFEPRLKPFLLELKARYLIYDIRSILSIKSVHSIRIYELLKQYEKIGSRTFDIDELKLILGIAPEEYALYGHFKDKVILKAQEDLNANRDTDIKFSFEEIKQGRKVVKIKFNILTHLPERKQLLDLPLFSTEEGTVQNELSILTADLIPDQTLQQWLSKYTYDDVKTGIVYTLNRLKAGEKIKNIPAYMAKMISTKGIIDPIEVKRQHRTKLATQQQQQANEIVVLENELEKVRIGHYEKQKLIVGDIFEQTPEIRLQIIEGLKYSRDWDRKKDDQENLNREHIQTLIFMKAMQKFPEQFIVINKDFEQKEAELKSKLRSLGWLG
SIO_010081: RUNSL_RS28900
subclass of: SO_0000673
so part of: RUNSL_RS28900
location: 6701..8065
location: region:6701-8065:1
so has part: feature:6701-8065:1:exon

WP_013931298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6701-8065:1:exon

RUNSL_RS31275
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS31275
so part of: sequence
location: complement(8119..8379)
location: region:8119-8379:-1
so has part: feature:8119-8379:-1:exon
subclass of: SO_0000010

position:8119:-1
position: 8119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8379:-1
position: 8379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8119-8379:-1:exon

RUNSL_RS31275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS31275
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: FAD/NAD(P)-binding oxidoreductase
translation: MVRSGVFDIQKTERSEASMMPKGVTWIKEAVESFEPENNAVNTGGGVYTYDYLVVCPGIQLNWSAVVPNYYNDFLSNFRQHKLRGS
SIO_010081: RUNSL_RS31275
subclass of: SO_0000673
so part of: RUNSL_RS31275
location: complement(8119..8379)
location: region:8119-8379:-1
so has part: feature:8119-8379:-1:exon

WP_212634846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8119-8379:-1:exon

RUNSL_RS28910
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28910
old locus tag: Runsl_5777
so part of: sequence
location: complement(8648..8962)
location: region:8648-8962:-1
so has part: feature:8648-8962:-1:exon
subclass of: SO_0000010

position:8648:-1
position: 8648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8962:-1
position: 8962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8648-8962:-1:exon

RUNSL_RS28910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28910
old locus tag: Runsl_5777
inference: COORDINATES: protein motif:HMM:NF017935.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF983 domain-containing protein
translation: MFHWKKFDKMHTSCPVCGERYTPEPGFYVGAMYISYALYVAFIVTNFVGFVLIFGIDPIRLLYFLVPALILLMPLFFRVARRIWINIFIKYDPQKARKVHQQPA
SIO_010081: RUNSL_RS28910
subclass of: SO_0000673
so part of: RUNSL_RS28910
location: complement(8648..8962)
location: region:8648-8962:-1
so has part: feature:8648-8962:-1:exon

WP_262504829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8648-8962:-1:exon

RUNSL_RS28915
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28915
old locus tag: Runsl_5778
so part of: sequence
location: complement(9109..9612)
location: region:9109-9612:-1
so has part: feature:9109-9612:-1:exon
subclass of: SO_0000010

position:9109:-1
position: 9109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9612:-1
position: 9612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9109-9612:-1:exon

RUNSL_RS28915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28915
old locus tag: Runsl_5778
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009284343.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YeeE/YedE thiosulfate transporter family protein
translation: MSFIKVSPDFVQEEQPFVCEAPNDMVKPESWADNFKYLVVGILFGIVFVKAEIISWFRIQEMFRLQSFHMYGVIGSAVVVGMISVFLIKKFNIKTVSGEEVQFHPKKFQRGQIYGGFIFGLGWAITGACPGPLFAQIGSGYVVVLATLLSAIAGTWTYGYFKDRLPN
SIO_010081: RUNSL_RS28915
subclass of: SO_0000673
so part of: RUNSL_RS28915
location: complement(9109..9612)
location: region:9109-9612:-1
so has part: feature:9109-9612:-1:exon

WP_013931300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9109-9612:-1:exon

RUNSL_RS28920
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28920
old locus tag: Runsl_5779
so part of: sequence
location: complement(9643..10218)
location: region:9643-10218:-1
so has part: feature:9643-10218:-1:exon
subclass of: SO_0000010

position:9643:-1
position: 9643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10218:-1
position: 10218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9643-10218:-1:exon

RUNSL_RS28920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28920
old locus tag: Runsl_5779
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015029969.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YeeE/YedE thiosulfate transporter family protein
translation: MDSFFEIIRRPWPWYVAGPLIGLTVPTLLLIGNKSFGISSSLRHICAACLPANISFFKYDWKKEIWNLVFVLGVFFGGMIAMNFPENPNSFQLSEATISDLKALGIQDFSGLMPADMFSTHVLFSSKGLILFVVGGFLVGFGTRYAGGCTSGHAIMGLSNLQVPSLIATCCFMAGGFVMTHLLMPVIFKLF
SIO_010081: RUNSL_RS28920
subclass of: SO_0000673
so part of: RUNSL_RS28920
location: complement(9643..10218)
location: region:9643-10218:-1
so has part: feature:9643-10218:-1:exon

WP_013931301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9643-10218:-1:exon

RUNSL_RS28925
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28925
old locus tag: Runsl_5780
so part of: sequence
location: complement(10230..11630)
location: region:10230-11630:-1
so has part: feature:10230-11630:-1:exon
subclass of: SO_0000010

position:10230:-1
position: 10230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11630:-1
position: 11630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10230-11630:-1:exon

RUNSL_RS28925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28925
old locus tag: Runsl_5780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015029968.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OprD family outer membrane porin
translation: MKVKICASIWVLWFVLTTGHTQGIHAYNGADKDTGTIKHFFENGRFYGHVRSYNSATVNQKDLSNYYAWGLGGGIGYETPVFLRHFQLGLSGFFILNIASSNLAKADAQTGQVNRYEIGLFDIEHPDYRKDLNRLEELFLKTRFGKKSVLTVGRQIPQSPFINPQDGRMSPTLIEGAVLDINEGKHWKLHGEYLWRISPRSTVRWMDIGESIGMYPTGVDMTGKPSQYKNQVQSDYVGILGATYQTKNWNVQLWDTYMDNVINTAFVKIEWQSTPAGGRNWMAGAQVIRQNAVGNGGNTDPMKAYTQPGSGALVFSGRIGKRSPKFDWFLNATRITSEGRYLMPREWGREPFYTFLPRERNEGFGDLTAATLNTFYKLQKNIKVEVSGGYFRLPDAKNVALNKYGMPGYSQINLGITYQFEDRLKGLSALLLVVRKDEQSNTYNNYRYIFNKVNMTHFNFILNYLY
SIO_010081: RUNSL_RS28925
subclass of: SO_0000673
so part of: RUNSL_RS28925
location: complement(10230..11630)
location: region:10230-11630:-1
so has part: feature:10230-11630:-1:exon

WP_229599842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10230-11630:-1:exon

RUNSL_RS28930
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28930
old locus tag: Runsl_5781
so part of: sequence
location: complement(11730..13406)
location: region:11730-13406:-1
so has part: feature:11730-13406:-1:exon
subclass of: SO_0000010

position:11730:-1
position: 11730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13406:-1
position: 13406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11730-13406:-1:exon

RUNSL_RS28930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28930
old locus tag: Runsl_5781
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015029967.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional metallophosphatase/5'-nucleotidase
translation: MPSRRDFLQSGLLATAAMENSMPSFAASQPDTSVTSESATLKNGVITFLQTTDVHCQLHAHDELFWENDQLTFRKAGGYAHVATALDALRKENPANTLTIDTGDMFQGSLLSVKTTGRAFVPLLNALSYDMYLPGNWEVVYYKKNMQKLLGGLLAPKVCTNMYHDLGDGKKGELIFQPYQIVNRLGIKIGFLGYIDPLVPLRQSPLYSKGILYTKPEENLKEYVELLKEQEQCDFIIILSHLGLSQQIALGNHPDCKSVDYIFGADTHERVRKPIQAEYTKIVEPGAFGSFVGRLDLKVENGKIVKESYQLIEVNPQKYPAKKEITALIEELEKPYKEEINKVIGYSTLPLYRNFVVENTIDTMIVDALKWKVNADVVLSNGFRFCPPRTAGKDGKIAITEGYLYDMLPVDSTIRTGTATGAQLLEWLEKELQNVFAQDASKRFGGWLIRFKGMQVEFKAFERVGRRVQKVVIAGQLLDPQKEYTLCACERDGDPEDMLCRMRGIKNAQNTAFTLHSMMKEYLKEFSPVTPALRHDAKVLDAPQTLLSQVYGVDYTFV
SIO_010081: RUNSL_RS28930
subclass of: SO_0000673
so part of: RUNSL_RS28930
location: complement(11730..13406)
location: region:11730-13406:-1
so has part: feature:11730-13406:-1:exon

WP_013931303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11730-13406:-1:exon

RUNSL_RS28935
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28935
old locus tag: Runsl_5782
so part of: sequence
location: complement(13418..13834)
location: region:13418-13834:-1
so has part: feature:13418-13834:-1:exon
subclass of: SO_0000010

position:13418:-1
position: 13418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13834:-1
position: 13834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13418-13834:-1:exon

RUNSL_RS28935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28935
old locus tag: Runsl_5782
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015029966.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DsrE family protein
translation: MKAHLLIFSFLTFVFVTGSFAQTKEHRIVFHLATSDTLAQKALVKQVANVLEYWNTAKIEVVVHNNGINFMKQDEARFAKEIAALKQRGVVFAVCENTMKQRKIEKSQILPSAVFVPVGLAEIVLRQEEGWSYIKAGF
SIO_010081: RUNSL_RS28935
subclass of: SO_0000673
so part of: RUNSL_RS28935
location: complement(13418..13834)
location: region:13418-13834:-1
so has part: feature:13418-13834:-1:exon

WP_013931304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13418-13834:-1:exon

RUNSL_RS28940
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28940
old locus tag: Runsl_5783
so part of: sequence
location: complement(13831..14913)
location: region:13831-14913:-1
so has part: feature:13831-14913:-1:exon
subclass of: SO_0000010

position:13831:-1
position: 13831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14913:-1
position: 14913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13831-14913:-1:exon

RUNSL_RS28940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28940
old locus tag: Runsl_5783
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012931370.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: c-type cytochrome
translation: MNSDHPVKKLLFSLRVLMGLLIAAMGLLVVFVYFYLFGLPDFKSEEPVTEKKGYVPPDSNFVGLWTAPADWRMAQLEPEEQKAVNYGKELISHTAEYLGPNGSVKHISNGMNCQNCHLQAGTQPWGNNYFAVQATYPKFRERSGTKENQIKRINDCLERSLNGKALDSASREMKSIVAYIKWLGTGVPQKTTPKGSGIFKIKGLKRACDPIAGKIVYEQKCQSCHQPNGEGVAAADGKSYTYPPLWGKNSYNVGAGLYRISNFAGYVKYNMPFGVTYQNPQLTDEEAWDVAAYVNSMPRPIKDLSKDWPNIAGKPFDHPFGPYADPFSEKQHKYGPYKPIKEWKEKHKDLKIKNPSLAQR
SIO_010081: RUNSL_RS28940
subclass of: SO_0000673
so part of: RUNSL_RS28940
location: complement(13831..14913)
location: region:13831-14913:-1
so has part: feature:13831-14913:-1:exon

WP_013931305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13831-14913:-1:exon

RUNSL_RS28945
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28945
old locus tag: Runsl_5785
so part of: sequence
location: complement(15086..15331)
location: region:15086-15331:-1
so has part: feature:15086-15331:-1:exon
subclass of: SO_0000010

position:15086:-1
position: 15086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15331:-1
position: 15331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15086-15331:-1:exon

RUNSL_RS28945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28945
old locus tag: Runsl_5785
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015027252.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQLINNRKLWLMASLTLGLAPFLPEPHLFGKIRWIMGGAVGMKPMDWFDFVLHGTPWVLLIRALTVTFLWKKAPIKSRKQ
SIO_010081: RUNSL_RS28945
subclass of: SO_0000673
so part of: RUNSL_RS28945
location: complement(15086..15331)
location: region:15086-15331:-1
so has part: feature:15086-15331:-1:exon

WP_013931307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15086-15331:-1:exon

RUNSL_RS28950
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28950
old locus tag: Runsl_5786
so part of: sequence
location: complement(15343..15960)
location: region:15343-15960:-1
so has part: feature:15343-15960:-1:exon
subclass of: SO_0000010

position:15343:-1
position: 15343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15960:-1
position: 15960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15343-15960:-1:exon

RUNSL_RS28950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28950
old locus tag: Runsl_5786
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013305007.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MNPETKKHWETVYETKNPDQVSWTQEVPKTSLDFIHSFKLPKTAKIIDIGGGDSKLVDFLVNEGFENVTVLDISANALDKAKKRLGDKANTINWVVSDITEFEPNTTFDVWHDRATFHFLTTTEQVAKYMETARKSVNGYLTIGTFSENGPTKCSGLTIKQYTEESLTTELENGFEKIRCLTEDHTTPFQTTQNFLFCSFKRQVI
SIO_010081: RUNSL_RS28950
subclass of: SO_0000673
so part of: RUNSL_RS28950
location: complement(15343..15960)
location: region:15343-15960:-1
so has part: feature:15343-15960:-1:exon

WP_013931308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15343-15960:-1:exon

RUNSL_RS28955
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28955
old locus tag: Runsl_5787
so part of: sequence
location: complement(16020..16616)
location: region:16020-16616:-1
so has part: feature:16020-16616:-1:exon
subclass of: SO_0000010

position:16020:-1
position: 16020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16616:-1
position: 16616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16020-16616:-1:exon

RUNSL_RS28955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28955
old locus tag: Runsl_5787
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015029964.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MKEFWDRRYKEPDFAYGTRPNEFFQENLDKLPVGKILLPAEGEGRNAVYAARKGWDVTAFDFSIQAMLKTFQLAERYDVSLQYTVQDVANFSAKGFEYDAVGLFYAHFPLEVRPAFYQKITQSLKKSGCVLLEAFHKNQKYYTSGGPKDETLLFSVEELRKEFVGLNILTLQDKIIELDEGPYHQGKAHVVRMIATKP
SIO_010081: RUNSL_RS28955
subclass of: SO_0000673
so part of: RUNSL_RS28955
location: complement(16020..16616)
location: region:16020-16616:-1
so has part: feature:16020-16616:-1:exon

WP_013931309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16020-16616:-1:exon

RUNSL_RS28960
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
gene: trxA
locus tag: RUNSL_RS28960
old locus tag: Runsl_5788
so part of: sequence
location: complement(16613..16933)
location: region:16613-16933:-1
so has part: feature:16613-16933:-1:exon
subclass of: SO_0000010

position:16613:-1
position: 16613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16933:-1
position: 16933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16613-16933:-1:exon

RUNSL_RS28960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
gene: trxA
locus tag: RUNSL_RS28960
old locus tag: Runsl_5788
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020597655.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin
translation: METTPKRETFADIINAETPTLVDFFAEWCGPCKMMSPILKEFAGQMGDRVRVIKIDVDQNPNAAQAYRIQGVPTLILFQKGEIKWRQSGVVHKHQLEQIVSQFTNA
SIO_010081: RUNSL_RS28960
subclass of: SO_0000673
so part of: RUNSL_RS28960
location: complement(16613..16933)
location: region:16613-16933:-1
so has part: feature:16613-16933:-1:exon

WP_013931310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16613-16933:-1:exon

RUNSL_RS28965
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28965
old locus tag: Runsl_5789
so part of: sequence
location: complement(17094..18515)
location: region:17094-18515:-1
so has part: feature:17094-18515:-1:exon
subclass of: SO_0000010

position:17094:-1
position: 17094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18515:-1
position: 18515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17094-18515:-1:exon

RUNSL_RS28965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28965
old locus tag: Runsl_5789
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009183243.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MKVEQIYTGCLAEAAYYIESEGEAAIIDPLRDTKPYIDRATKEGANIKYVFETHFHADFVSGHLDLSAKTGATIVFGPTAKPAYTAYTAQDGEDFQVGKIKIRAIHTPGHTMESTCFLLMDETGKETAIFTGDTLFIGDVGRPDLAQHVISDLTEEKLAGHLYESLRNKIIPLPNELIVYPGHGAGSACGKKMSKETTDTLGNQKLFNYALNLKLTKEQFIKETLTGLVPPPSYFPQNVLMNIKGYESLDEVMQRGSQALSPEAFEAAANETEALVLDVREAQTFAKGFIPNAINIGIEGQFASWVGTLIPDLKQPILLVTEAGKEEETITRLARVGYDNCIGYLQGGIQAWKDAGKEADTVTSISAEAFSNVLAADPTIAAFDVRKKSEYDSEHVIGVENLPLDFLNDNMAQINPDKTYFLHCAGGYRSMIAVSILKARGFENLIDVAGGFAAIKAVGKLPLTEYVCPSTML
SIO_010081: RUNSL_RS28965
subclass of: SO_0000673
so part of: RUNSL_RS28965
location: complement(17094..18515)
location: region:17094-18515:-1
so has part: feature:17094-18515:-1:exon

WP_013931311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17094-18515:-1:exon

RUNSL_RS28970
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28970
old locus tag: Runsl_5790
so part of: sequence
location: complement(18705..18959)
location: region:18705-18959:-1
so has part: feature:18705-18959:-1:exon
subclass of: SO_0000010

position:18705:-1
position: 18705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18959:-1
position: 18959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18705-18959:-1:exon

RUNSL_RS28970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28970
old locus tag: Runsl_5790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008637793.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF202 domain-containing protein
translation: MEKKPDFDEKIEEELILRDYLAIERTRLANETALLAYLRTGLFLLSVGLTFFQLKEFKAISLIGWVCLPLSFISVSFGVYRFIR
SIO_010081: RUNSL_RS28970
subclass of: SO_0000673
so part of: RUNSL_RS28970
location: complement(18705..18959)
location: region:18705-18959:-1
so has part: feature:18705-18959:-1:exon

WP_013931312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18705-18959:-1:exon

RUNSL_RS28975
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28975
old locus tag: Runsl_5791
so part of: sequence
location: complement(19219..20634)
location: region:19219-20634:-1
so has part: feature:19219-20634:-1:exon
subclass of: SO_0000010

position:19219:-1
position: 19219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20634:-1
position: 20634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19219-20634:-1:exon

RUNSL_RS28975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28975
old locus tag: Runsl_5791
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020604924.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MFFQHIYDKTLAQASYLIGCQKTGEAIVIDPKRDVDTYLEIAKQNGLRITHVTETHIHADFLSGARELAAITGATMYLSDEGGEGWEYEFDHVGLKNGAVIIVGNLTLEVIHTPGHTPESISFLLTDKPASLQPVMLFTGDFVFVGDIGRPDLLEKAAGMLGTQDAGALQMYHSIQKFNTLPDFLQVWPGHGAGSACGKALGAVPSSTVGYEKIRNWAFQYDDDQEGFIKYLLTDQPEPPKYFATMKKLNKVNRPLLTAVPTQKKLTGEEVKEAMAQGIKLIDTRNKVEFAAGFLPDSLNIQGNNAFATWMGWFINYEEPFMLVAAETQIEDLTRKLMRIGLDNVYGYISDVTSAGVELAKSEVIEMDEFKTYLNREDVQVIDLRGVAEYNAGHIEGAENVFIGTLPTNLEKISRDKQVVIHCQGGDRAAIGYSILAKNGFKNVKNYSGGIIEWVNKGNPLETELVEAAVC
SIO_010081: RUNSL_RS28975
subclass of: SO_0000673
so part of: RUNSL_RS28975
location: complement(19219..20634)
location: region:19219-20634:-1
so has part: feature:19219-20634:-1:exon

WP_013931313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19219-20634:-1:exon

RUNSL_RS28980
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28980
old locus tag: Runsl_5792
so part of: sequence
location: complement(20736..21542)
location: region:20736-21542:-1
so has part: feature:20736-21542:-1:exon
subclass of: SO_0000010

position:20736:-1
position: 20736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21542:-1
position: 21542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20736-21542:-1:exon

RUNSL_RS28980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28980
old locus tag: Runsl_5792
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015029959.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfite exporter TauE/SafE family protein
translation: MNSTEIFGFSASIFIGISLGLIGGGGSILTLPVLVYLLGINPVLSTAYSLFVVGTTSLVGSFNFMRKGLVNYKAALVFAIPSFITVFLTRKYLVPAIPNSLFTVAGFEVTKNIGIMLFFALVMLAASYSMIKGNKKKEEKDSGELQFNYPIIGLEGAVVGVLTGIVGAGGGFLIIPALVLLARLPMKMAVGTSLLIIAAKSLIGFVGDISNASVDWTFLLEFTALSVVGIFVGSYLSRFIAGEKLKKAFGWFVLVMGVYIISKEIFFK
SIO_010081: RUNSL_RS28980
subclass of: SO_0000673
so part of: RUNSL_RS28980
location: complement(20736..21542)
location: region:20736-21542:-1
so has part: feature:20736-21542:-1:exon

WP_013931314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20736-21542:-1:exon

RUNSL_RS30465
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS30465
old locus tag: Runsl_5793
pseudo: true
so part of: sequence
location: complement(21617..>22133)
location: region:21617-22133:-1
so has part: feature:21617-22133:-1:exon
subclass of: SO_0000010

position:21617:-1
position: 21617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22133:-1
position: 22133
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21617-22133:-1:exon

RUNSL_RS30465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS30465
old locus tag: Runsl_5793
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009284348.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Crp/Fnr family transcriptional regulator
SIO_010081: RUNSL_RS30465
subclass of: SO_0000673
so part of: RUNSL_RS30465
location: complement(21617..>22133)
location: region:21617-22133:-1
so has part: feature:21617-22133:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21617-22133:-1:exon

RUNSL_RS31665
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS31665
pseudo: true
so part of: sequence
location: complement(<22315..22692)
location: region:22315-22692:-1
so has part: feature:22315-22692:-1:exon
subclass of: SO_0000010

position:22315:-1
position: 22315
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:22692:-1
position: 22692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22315-22692:-1:exon

RUNSL_RS31665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS31665
inference: COORDINATES: protein motif:HMM:NF024751.2
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: RUNSL_RS31665
subclass of: SO_0000673
so part of: RUNSL_RS31665
location: complement(<22315..22692)
location: region:22315-22692:-1
so has part: feature:22315-22692:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22315-22692:-1:exon

RUNSL_RS28995
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS28995
old locus tag: Runsl_5795
so part of: sequence
location: complement(22784..23182)
location: region:22784-23182:-1
so has part: feature:22784-23182:-1:exon
subclass of: SO_0000010

position:22784:-1
position: 22784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23182:-1
position: 23182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22784-23182:-1:exon

RUNSL_RS28995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS28995
old locus tag: Runsl_5795
inference: COORDINATES: protein motif:HMM:NF024776.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSRKEKHIELTETERLTLREGSKYHSKPEFRVKCQGLLLNHTGMGFKTIATHLGISHNTVGNWVKACETIGIAGLCRKNGQGRKLILSVSNTAHTDLLGKTVEAHRQNVKAIRADLIKEPATPMSTDTVKRF
SIO_010081: RUNSL_RS28995
subclass of: SO_0000673
so part of: RUNSL_RS28995
location: complement(22784..23182)
location: region:22784-23182:-1
so has part: feature:22784-23182:-1:exon

WP_013931315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22784-23182:-1:exon

RUNSL_RS29000
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS29000
old locus tag: Runsl_5796
so part of: sequence
location: complement(23413..24210)
location: region:23413-24210:-1
so has part: feature:23413-24210:-1:exon
subclass of: SO_0000010

position:23413:-1
position: 23413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24210:-1
position: 24210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23413-24210:-1:exon

RUNSL_RS29000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS29000
old locus tag: Runsl_5796
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF4249 domain-containing protein
translation: MKIRQIISAILIGGLFSCEKEITLDLNTANKKFVIEGEITPNEKATVRIIKTVDFTQPNNFPSVRGANVRLSDGSGNTEQLVETGAGVYQSQKIVGAEGKTYSLTVIIEGSTFTAQTTMPTNIKLTGIKVQKSSFSPPGSTSDSYIIYPQFIDPAAFGNSYRFIQTRNGERDKSIIVANDNIGNGLPNSRPILSADFEIVLGDNVTLEMHCIDKPIYDYFFSLNSVQGNGPGGGTVPANPVTNIKGGALGYFSAHTLQRMSIEVK
SIO_010081: RUNSL_RS29000
subclass of: SO_0000673
so part of: RUNSL_RS29000
location: complement(23413..24210)
location: region:23413-24210:-1
so has part: feature:23413-24210:-1:exon

WP_013931316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23413-24210:-1:exon

RUNSL_RS29005
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS29005
old locus tag: Runsl_5797
so part of: sequence
location: complement(24322..26631)
location: region:24322-26631:-1
so has part: feature:24322-26631:-1:exon
subclass of: SO_0000010

position:24322:-1
position: 24322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26631:-1
position: 26631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24322-26631:-1:exon

RUNSL_RS29005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS29005
old locus tag: Runsl_5797
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013666971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent receptor
translation: MAKLKFIVFCVLMSSFKLFAQEKFTISGTLRDKASGEELIGATVVVKEIPNTGKAANEYGFYSITLPKGSYTLKGTYIGYEEMTKTVNLDKNLKIDWELESGKMLEAVVIKATKEDDNITKTSMGTEKLDIKEIAKLPVIFGEKDVLKTIQLLPGVKTAGEGNSGFFVRGGAADQNLILLDEAPVYNASHLLGFFSTFNSDAIKDATIIKGNSPANFGGRLSSVLDVRMREGNDKAFQTSGGIGVISSRLAIEGPIQKEKSSFMISGRRTYADVFLKASPDFSDTQLYFYDLNAKANYRINENNRVYVSGYFGRDRLGFGDAFGIDWGNKTGTLRWNSIINSKWFSNTSLIYSDYSYEFKVSGGDNSFVNQSKIKDWNLKQEFQFFPSTKNSWRFGFNSIRHTITPGSLINETNANENDIKEGRNALENAVYVQNTYSVSPKFSMDYGLRLSSWSILGGTTYNIYDRGVKTDSVVLADGAFGKTYFNVEPRLAFNFILNEKSSLKAGYARNTQNLHLLSNSTSSNPTDQWVGSSYNIKPGISDQVSLGYFRNFAENKYEFSAETYYKSLQNQIDYKNGADIQTAPDVESELLYGKGRAYGLELLLKKKSGKFTGWVSYTLSKTERQIDGINEGNWYSARQDRTHDLAIVGMYQLSTRWSLSGNFIFYTGDAVTFPSGKYEVAGNTAFYYTERNASRMPNYHRLDVSATYENPRKGRYQTSWNFSLYNAYGRQNAYTINFEDDENDPSRTRAVQTSLFRWVPSVTYNFKF
SIO_010081: RUNSL_RS29005
subclass of: SO_0000673
so part of: RUNSL_RS29005
location: complement(24322..26631)
location: region:24322-26631:-1
so has part: feature:24322-26631:-1:exon

WP_013931317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24322-26631:-1:exon

RUNSL_RS29010
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS29010
old locus tag: Runsl_5798
so part of: sequence
location: complement(26859..29990)
location: region:26859-29990:-1
so has part: feature:26859-29990:-1:exon
subclass of: SO_0000010

position:26859:-1
position: 26859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29990:-1
position: 29990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26859-29990:-1:exon

RUNSL_RS29010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS29010
old locus tag: Runsl_5798
inference: COORDINATES: protein motif:HMM:NF013069.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter permease subunit
translation: MTLTELAIKRPSLLIVLFLVLALGGIMSYNRLGYEILPRFTPQLLTITTVYPGAAPNEIESQVTKKIEDQLSNQNGIVSINSSSFEGLSLVSLELSNDASLKAVKQDVIAKINSLQSLLPNDAQTPTVSELSFNDLPVLRISATADLTATQFFSELKNRIIPQLSQLDGVGSVELLGGEEREIRVNINQDKISAYGISILQVNQAINNANLDFPTGKIEAGKTQTVIRLTGKFNKIEQLKDLIVATSRMGGTIKLQDIAEVIDSKKDIRNINRLNGKEAVGVQVRKRTDANSVAVSKAVRDKIAELENKYSNINLKFVVAIDTSSFSLEAAEAVQHDLLIAILLVALVMLIFLHSIRNSFIVMVAVPCSLVTAFIIMYLAGYTFNLMTLLAMSLVIGILVDDSIVVLENIYRHLEMGKDARTAAIDGRNEIGFTALSITLVDVVVFVPFLLLTNTTGKLLAPFAAVVVVSTLMSLFVSFTVTPWLASRFAKAEDVKTKKGVWGRFVRSLEIGIEHLSHFYAAALSRCLQHKTITILFIVAMIMGAGQLVRFGFIGDEFVKQGDQREFIIKLEYDKSITFQQNNLTTKQVEDFLREKPYVKSVFANVGGSSDLINLGNSNNQSEINVKIYPNEIVEKATDQAATECQMALQRQFPQIKITSAKPSFLGGNEDDPIEIIFSGENPDSVLAVVKSVEKTVRKIPGAIDTKVSIKEGFPEVNVSLDRDKMAKLGLDINLVGATMQSALAGNDKAKFRDGFDEYDIKVQLDKFDRRNEADVAALSFINNKGQTIRLDQFASLSYGISASKLERKNRRSSVTFKSQVLGTPSGNVADAIQAEMDKMNLPKNIEYSWAGEIKRSKDSTDTLLAVLGIAIILIYLIMVALYDSFIYPFVVLFSIPVALIGALLALALAKSSFSLFTGLGIIMMLGLVAKNGILIVDFTNQLKEKGLNTIDALMESGKTRLRPILMTTLALVFGMIPIAIAKGAGAEWKNGLGWVLIGGLTSSMLLTLIIVPVVYLTVDNIKAWFGKLGANKKKIERMSVAK
SIO_010081: RUNSL_RS29010
subclass of: SO_0000673
so part of: RUNSL_RS29010
location: complement(26859..29990)
location: region:26859-29990:-1
so has part: feature:26859-29990:-1:exon

WP_013931318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26859-29990:-1:exon

RUNSL_RS29015
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS29015
old locus tag: Runsl_5799
so part of: sequence
location: complement(30013..31077)
location: region:30013-31077:-1
so has part: feature:30013-31077:-1:exon
subclass of: SO_0000010

position:30013:-1
position: 30013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31077:-1
position: 31077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30013-31077:-1:exon

RUNSL_RS29015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS29015
old locus tag: Runsl_5799
inference: COORDINATES: protein motif:HMM:TIGR01730.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
translation: MKKSSIVITISIVCAFTIFTFLKLSKNKEELSSQVYKADTAKAVLITWEKVDKKMINPSFIFSGSYEPYKEVQILPERGGKVVADHIELGSFIAKGKLIAALDSDELKLQIADNQTQYDDARRTFERNKVLSEGEALTKTAFEKSELALKGLQNRMEVLKKQMTYMNIYAPMSGYITVKNFELGSIISPGMPIAMLTDISSVNLTILVPENAITQFVKGNSIDVSCDAYPDRPLKGFIDYIAVKADDSKNFLVKIKVINNTSQLIRGGMFGKAFFKSMQPVGALTVSRNAIVGSTRKPQVYVIKNNIAVLTDITLGQILEDRLEVVKGLSAGDLVANSGLVNLANGIKVQQTAQ
SIO_010081: RUNSL_RS29015
subclass of: SO_0000673
so part of: RUNSL_RS29015
location: complement(30013..31077)
location: region:30013-31077:-1
so has part: feature:30013-31077:-1:exon

WP_013931319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30013-31077:-1:exon

RUNSL_RS29020
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS29020
old locus tag: Runsl_5800
so part of: sequence
location: complement(31088..32455)
location: region:31088-32455:-1
so has part: feature:31088-32455:-1:exon
subclass of: SO_0000010

position:31088:-1
position: 31088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32455:-1
position: 32455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31088-32455:-1:exon

RUNSL_RS29020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS29020
old locus tag: Runsl_5800
inference: COORDINATES: protein motif:HMM:NF014385.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TolC family protein
translation: MCKKTGTTIGRLVVLAAVFNIFSPWAVAQTTDTLTLSQCVEIALKNNQNIKNKRLDELINQTKIDETRADLYPQLKAKGSYQYYPSVPKSLVSSAILGGPPSEFTYSEFQVPQNIHFAADFSWQVYNPAILAALKISKISKVMSATATKEKLEAVVYDVSATFLNIQINELQADLTRSNIANLKKNVALTTQLFNQGLALRSDADNLNVSIVNLETVLSNQLNGLNQLYYLLKVYMGLPPSFVLCIEKYVQDDKIYIPALETDSSAYAKRSSYLSLKQTGDLLQLQRQSIKAGFLPTVNLIGSFGYSGLNTEFNFLKSYNSKWYPINLIQLNLEIPIFDGYKKRSQLLRNKFELDQNQNTLNYLRNTLQMEQMNAVSTYEKYVKDVEYQIKNLSLANKLYNQKQLEYRNSTASLNDIIAVENTLKSAQANYLNALIKLKLAELDLRKINGQLIKN
SIO_010081: RUNSL_RS29020
subclass of: SO_0000673
so part of: RUNSL_RS29020
location: complement(31088..32455)
location: region:31088-32455:-1
so has part: feature:31088-32455:-1:exon

WP_013931320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31088-32455:-1:exon

RUNSL_RS29025
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS29025
old locus tag: Runsl_5801
so part of: sequence
location: complement(32549..33481)
location: region:32549-33481:-1
so has part: feature:32549-33481:-1:exon
subclass of: SO_0000010

position:32549:-1
position: 32549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33481:-1
position: 33481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32549-33481:-1:exon

RUNSL_RS29025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS29025
old locus tag: Runsl_5801
inference: COORDINATES: protein motif:HMM:NF024242.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MKKNIPTIDPQLFVKDYFDHSLMEEDGFNISNITPKEQNCFFYISPIEAGTKYINFPVESIKTTYYEVIFVTNGYYVVTDNLNELTQTEGQIRFVSPGKISSIQKLSNDIEGYYCLFDQAFIDTYSGVANLLNSFTFFDLDALPVISLSDQQAQFFALVFKKMNFDFVENYKITKPIICQYLVAIFKESSLYYEKISLENKKLTSADRIGQGFIRLVNKHYLSKRTLAEYATLLNITTKHLTKSVKQATGETPMDFIYKMLILEAKVLLKETALTVAEIAYQLSFDDAAHFGRFFKQHTGNTPVEFRNKT
SIO_010081: RUNSL_RS29025
subclass of: SO_0000673
so part of: RUNSL_RS29025
location: complement(32549..33481)
location: region:32549-33481:-1
so has part: feature:32549-33481:-1:exon

WP_013931321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32549-33481:-1:exon

RUNSL_RS29030
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS29030
old locus tag: Runsl_5802
so part of: sequence
location: complement(33492..34256)
location: region:33492-34256:-1
so has part: feature:33492-34256:-1:exon
subclass of: SO_0000010

position:33492:-1
position: 33492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34256:-1
position: 34256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33492-34256:-1:exon

RUNSL_RS29030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS29030
old locus tag: Runsl_5802
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007808742.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LytTR family DNA-binding domain-containing protein
translation: MKILIIEDEKLTAKDLARTIIGLNPDAEIIAMLPSVEEGVAFLQTSPQIDLIFSDIQLGDGLSFEIFEKTQNQTPVIFCTAFNEYALEAFKTVGIDYLLKPFSKATVGKALEKYQLLKERLTPPKDEMKGLMNLLKAQLQPVKTPSVIIQQGDKIIPLDTAQVALFVVENDGVFAYTFESRKWLVSQALDHLEQSLSPTFFRANRQFLVNRRAVKDASQHFNRKIAINLTVPFTEQIVVGKLKVTAFVEWLANI
SIO_010081: RUNSL_RS29030
subclass of: SO_0000673
so part of: RUNSL_RS29030
location: complement(33492..34256)
location: region:33492-34256:-1
so has part: feature:33492-34256:-1:exon

WP_013931322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33492-34256:-1:exon

RUNSL_RS29035
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS29035
old locus tag: Runsl_5803
so part of: sequence
location: complement(34253..35260)
location: region:34253-35260:-1
so has part: feature:34253-35260:-1:exon
subclass of: SO_0000010

position:34253:-1
position: 34253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35260:-1
position: 35260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34253-35260:-1:exon

RUNSL_RS29035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS29035
old locus tag: Runsl_5803
inference: COORDINATES: protein motif:HMM:NF018305.2
GO component: GO:0016021 - integral component of membrane [Evidence IEA]
GO function: GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine kinase
translation: MKQKLLLYAVISTPIFGLYAVSHPLIFGVLPFKVLLLPFLGININVFITWLTNIYLTIHFSHLSIWRKVSFSYACILLIHGILGGIQYFFLTDKISFVPKEAVSALNNNFLYPILTSSAINVIIIIICQATEASYRRNEAELKAKELELLHSQAQKKLLVQQLQPHFLFNALSVLKSLIGENTAQAEEYTVKLADFLRYSVQSHQNEVVTLADELRFVGDFVELQKVRFENSFMYVVALPDEVLKHNVPIFALQTLVENTFKHNYFTEQKPLVIKISCLDNSITVWNNKMPVKTTDRTQTGLANLNSRYELITGKGIEINEGTDFFEVRIPLVNA
SIO_010081: RUNSL_RS29035
subclass of: SO_0000673
so part of: RUNSL_RS29035
location: complement(34253..35260)
location: region:34253-35260:-1
so has part: feature:34253-35260:-1:exon

WP_169705268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34253-35260:-1:exon

RUNSL_RS29040
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS29040
old locus tag: Runsl_5807
so part of: sequence
location: complement(35734..37254)
location: region:35734-37254:-1
so has part: feature:35734-37254:-1:exon
subclass of: SO_0000010

position:35734:-1
position: 35734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37254:-1
position: 37254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35734-37254:-1:exon

RUNSL_RS29040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS29040
old locus tag: Runsl_5807
inference: COORDINATES: protein motif:HMM:NF012371.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine hydrolase domain-containing protein
translation: MKKTITFCTIFWLVAQVSFAQTNSFFVKDSLGAYIQKSMAQWNIPGLALAITQGDVIIYSKAFGVLKKGATEPVNSQTLFPIGSMGKSFTAFSLAMLDHQQKLSLDDKVKKWLPWFSMKDKDYEKELRVKDILSHRTGMETFQGDLLWTESSLSNRAIIEKWGKFKPSFPIRSNFGYCNIGYMIAGEVIKANTGLSWQQYTQQNILNPLGMKNSFVEMASLKNKPNVAVGHTITNNQLEQIPEGTGVMQAFGGMYSNLEDIARWLMLHTNDGRIDGKQLFPERLIWNVRNPFSIVGKQFFPQGNMLTVNYGLGWDMVNYYNQEIVSHGGAYSGFLSMMGFVPNKKMGFVILTNSDSHEFTEALRWTIIDSFLGVKTKNYSEEMFAYIRHRNTEEKKIMASWKDSVNVLNAHKISLKPFEGRYQNDIYGNIELKQQENKLLMKMEHHPSISATLSYMSNDRFLCEYNHPMFGTAVIPFSRVNGNATGLTLSVHPSLEYTTYSFIKIK
SIO_010081: RUNSL_RS29040
subclass of: SO_0000673
so part of: RUNSL_RS29040
location: complement(35734..37254)
location: region:35734-37254:-1
so has part: feature:35734-37254:-1:exon

WP_013931326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35734-37254:-1:exon

RUNSL_RS31670
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS31670
old locus tag: Runsl_5808
so part of: sequence
location: complement(37399..37560)
location: region:37399-37560:-1
so has part: feature:37399-37560:-1:exon
subclass of: SO_0000010

position:37399:-1
position: 37399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37560:-1
position: 37560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37399-37560:-1:exon

RUNSL_RS31670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS31670
old locus tag: Runsl_5808
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDIDFVPHIGVGNTLNASQYKDWVDTWNTENFEIKGRNKRLSIVCYENDVVTQ
SIO_010081: RUNSL_RS31670
subclass of: SO_0000673
so part of: RUNSL_RS31670
location: complement(37399..37560)
location: region:37399-37560:-1
so has part: feature:37399-37560:-1:exon

WP_013931327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37399-37560:-1:exon

RUNSL_RS29985
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS29985
old locus tag: Runsl_5810
so part of: sequence
location: complement(38040..41777)
location: region:38040-41777:-1
so has part: feature:38040-41777:-1:exon
subclass of: SO_0000010

position:38040:-1
position: 38040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41777:-1
position: 41777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38040-41777:-1:exon

RUNSL_RS29985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS29985
old locus tag: Runsl_5810
inference: COORDINATES: protein motif:HMM:NF012961.2
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 9 protein
translation: MSSKQQLCRQLGAWLFCLLLGQNLWAAPSRTVPNLRVDQFGYFLNSRKVAVIIDPQAGRNAATERFSPGTGAGQYQVRRWDNDAIVFSGTLQVWNNGNTQAQSGDKGWWFDFSSVNQAGSYYVFDVGNNVGSYRFEIGDQVYQQVLKAAVRTYFYQRINHAKQTPFTDSKWTDIASHEGSNQDRAATSRFAKGDATTARDLHGGWMDAGDMNKYVTFAEEPVAILLEAYRANPTVFGDNFNIPESGNGVPDLLDEVKWELDFMKRMQDATGTGGLFLKVGVDNYNEAVAPPSNDRRPRYYLPECTSSTISGAVMFSVGASVMRQIPALQSYAQDLMARAERAWARAKVTTNNFTNFQEDCDDQNIKSGDADRKAKDQKQSLVAAAMYLFEITGKAEYKAYAERNYNLSEPVSNEWWGPYAMHIQASYLRFAQLSNVTPSIATAIRGMKAQQNPTLSLNDYNAKRDLYRAFMADAQYHWGSNQVRGNAGVANMDFLTFNVNPLQKDQYREVAESYLHWFHGVNAQGKVMLSNMYAYGAENSLNELFHVWYYDGTDWDNALTSSKGPVPGYVPVGPQNMVRYQGTVSWLRNEPLQKRFDDWNATYPENSWEFTEPAIYNNAPYISLLSRLLTPTSDPSDTEAPTAPTHLTASDLSPFSVKLSWTASLDNRGVTGYEIYQNGEKIGETNQPWFNITTLNPATAYQFTVKAFDFSRNVSPAGNVVTLTTPAPGSYDYSIYGDALRNTISEWSWSIVSNLNNTSLVKEGTKSLKVDVNAAWGALSLRNSEILQTSNYPGGLQFWLYSTTDKTVRVVVNQTDTGPTSNVYRILPTPNEWMLVRIPWSEWNSPTQIQRISFMDGSGGAQSFILDDIRLIAGNTPPDTQAPTVPSNLNVSNITQTSLRLTWTASTDNVGVTAYEVYQNGSLLDGNVTGSNPKAVFGYHFITQQVTDITYNISGLTCGTAYIYTVRAKDAAGNISGNSNTVNVSTSACPGGGTGANEVIYNEALDSKWREWSWSVNRDYNNASPVKIDTKSLRISYTGGWGAWSVIRSSHILPTAQTTIKFWIYATTNKTIAVFTNGEDNSQESLNFTFKPTPEAWQEITVTMPNLGNPAKIKRLTIQSQASGTNQVFLDNIRIETPMPTARLGVESGVLSPEPVEIPAKGRMVVSPNPASEPFQVTVWTPDDDRRANLELYTLAGMNVFSRTVEANTGRNDYTLDIETLSAGMYLVVWQNGSKRLSEKVLIIK
SIO_010081: RUNSL_RS29985
subclass of: SO_0000673
so part of: RUNSL_RS29985
location: complement(38040..41777)
location: region:38040-41777:-1
so has part: feature:38040-41777:-1:exon

WP_013931329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38040-41777:-1:exon

RUNSL_RS29990
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS29990
old locus tag: Runsl_5811
so part of: sequence
location: complement(41870..43144)
location: region:41870-43144:-1
so has part: feature:41870-43144:-1:exon
subclass of: SO_0000010

position:41870:-1
position: 41870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43144:-1
position: 43144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41870-43144:-1:exon

RUNSL_RS29990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS29990
old locus tag: Runsl_5811
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTTQSLLPAVLVLSMFSACNKANDPLVKIELNHEFKSSTEDWIGGFANHSNESNIEELYEFEFSHAALPKPLNTSKKALMRSGKNYSDDLFMFIKKKLRGLTSNKMSEVDVELGFANNVPKNMFGVGGSPGENVYIKAGTFTIEPNKVLDKTDNHYTINIHKGNQAQEEAYMKLVAVVLWDSVQAQETFNASIESAKAPKEANESHLLLGNTSDENQDWMILRLAPKNANLSNGGYSDIQSGIGTNADRQADKLQIFNGHSDLDETGKLNLYSGVVGVNLISGNRVLIGHGTSFSSGWYGVWRVCGLFLHNKILSPGIPNEAGSDFQLQANRSDSQIDRSLLTVGISGKMAVNGNAPAAQLHILPHPNTPAFQVDKAGNNPAFTIDIDDRDLITDYHNLIFGGNGMGNLNRPNTGGILMGNVR
SIO_010081: RUNSL_RS29990
subclass of: SO_0000673
so part of: RUNSL_RS29990
location: complement(41870..43144)
location: region:41870-43144:-1
so has part: feature:41870-43144:-1:exon

WP_013931330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41870-43144:-1:exon

RUNSL_RS29060
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS29060
old locus tag: Runsl_5812
so part of: sequence
location: complement(43342..43635)
location: region:43342-43635:-1
so has part: feature:43342-43635:-1:exon
subclass of: SO_0000010

position:43342:-1
position: 43342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43635:-1
position: 43635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43342-43635:-1:exon

RUNSL_RS29060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS29060
old locus tag: Runsl_5812
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQITPSFRCPQDLSVASKLWVGIEKPADQGVELTIFDDRQRIVFHQYHTKGNAMLVQRFDIKNLYDGEYALYIRSGKEIVKKIFTVKTSEMTQVVLK
SIO_010081: RUNSL_RS29060
subclass of: SO_0000673
so part of: RUNSL_RS29060
location: complement(43342..43635)
location: region:43342-43635:-1
so has part: feature:43342-43635:-1:exon

WP_013931331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43342-43635:-1:exon

RUNSL_RS29065
type: Gene
subclass of: SO_0000704
RO_0002162: 761193
locus tag: RUNSL_RS29065
old locus tag: Runsl_5813
so part of: sequence
location: 43853..44455
location: region:43853-44455:1
so has part: feature:43853-44455:1:exon
subclass of: SO_0000010

position:43853:1
position: 43853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44455:1
position: 44455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43853-44455:1:exon

RUNSL_RS29065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 761193
locus tag: RUNSL_RS29065
old locus tag: Runsl_5813
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015026390.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLFGYARVSTKDQNLELQWDALTKAGCEMIFQEKASGVKADRPELEKMMVQLRKGDVVCIYKLDRLGRSLKNLLELVAEFEKRGVGLRSLTDSIDTTTPQGRLVLNIFASLAEFERDLIRERTKAGLEAARARGRKGGRRSGLSPEAQKKAMLAEMYYKEEKLGVDEISKTVGISKMTLYKYLRLRGVKISAYQKTEVNK
SIO_010081: RUNSL_RS29065
subclass of: SO_0000673
so part of: RUNSL_RS29065
location: 43853..44455
location: region:43853-44455:1
so has part: feature:43853-44455:1:exon

WP_013931332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43853-44455:1:exon