Rissa tridactyla isolate bRisTri1 chromosome 29, bRisTri1.patW.cur.20221130, whole genome shotgun sequence.
type: Entry
definition: Rissa tridactyla isolate bRisTri1 chromosome 29, bRisTri1.patW.cur.20221130, whole genome shotgun sequence.
sequence version: NC_071494.1
sequence date: 2023-03-15
sequence: sequence
division: CON
label: NC_071494.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA940128
dblink: SAMN32104255
keyword: WGS
keyword: RefSeq
source: Rissa tridactyla (black-legged kittiwake)
organism: Rissa tridactyla
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Laridae; Rissa.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM053013.1.\nAssembly name: bRisTri1.patW.cur.20221130\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2023/02/09. The original whole-genome shotgun project has the\naccession JAPUFG000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 30-NOV-2022\nAssembly Method :: hifiasm v. 0.16.1+galaxy2; Bionano Solve\n v. 3.7.0+galaxy0; SALSA2 v. 2.3+galaxy2\nAssembly Name :: bRisTri1.patW.cur.20221130\nDiploid :: Paternal Haplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 33.0x\nSequencing Technology :: PacBio Sequel II HiFi; Bionano DLS; Arima\n Hi-C v2\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_028500815.1-RS_2023_03\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 03/08/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 383819
topology: linear
so has quality: SO_0000987
location: 1..383819
location: region:1-383819:1
RO_0002162: 75485

NC_071494
type: RefSeq
SIO_000068: refseq

PRJNA940128
type: BioProject
SIO_000068: bioproject

SAMN32104255
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383819:1
position: 383819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-383819:1:source
so part of: sequence
organism: Rissa tridactyla
mol type: genomic DNA
isolate: bRisTri1
chromosome: 29
sex: female
tissue type: blood
dev stage: adult
country: USA: Middleton Island, Alaska
lat lon: 59.43 N 146.34 W
collection date: 2008/2010
collected by: Kyle Elliott

75485
type: Taxonomy
SIO_000068: taxonomy

LOC128901836
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: LOC128901836
note: small nucleolar RNA SNORA57; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 73570..73704
location: region:73570-73704:1
so has part: feature:73570-73704:1:exon
subclass of: SO_0000578

128901836
type: Gene
SIO_000068: ncbigene

position:73570:1
position: 73570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73704:1
position: 73704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73570-73704:1:exon

LOC128901836
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 75485
nc RNA class: snoRNA
gene: LOC128901836
product: small nucleolar RNA SNORA57
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00191
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_008463536.1
SIO_010081: LOC128901836
subclass of: SO_0000673
so part of: LOC128901836
location: 73570..73704
location: region:73570-73704:1
so has part: feature:73570-73704:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:73570-73704:1:exon

LOC128901814
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: LOC128901814
note: ubiquinol-cytochrome-c reductase complex assembly factor 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 74115..75414
location: region:74115-75414:1
so has part: feature:74115-75414:1:exon
subclass of: SO_0000010

128901814
type: Gene
SIO_000068: ncbigene

position:74115:1
position: 74115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75414:1
position: 75414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74115-75414:1:exon

LOC128901814
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: LOC128901814
product: ubiquinol-cytochrome-c reductase complex assembly factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_054183970.1
SIO_010081: LOC128901814
subclass of: SO_0000673
so part of: LOC128901814
location: join(74115..74331,74414..74908,75272..75414)
location: region:74115-75414:1
so has part: feature:74115-74331:1:exon
so has part: feature:74414-74908:1:exon
so has part: feature:75272-75414:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74115-74331:1:exon

position:74331:1
position: 74331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:74414-74908:1:exon

position:74414:1
position: 74414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74908:1
position: 74908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:75272-75414:1:exon

position:75272:1
position: 75272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128901814
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: LOC128901814
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2 isoform X1
translation: MVAKAQASPEVAGSVARAAQSGPRRRGHGGGAALGAGAAAGRRAGGGRAAAVGGGGRGRGAAPTDAEGAARGEPRAPGAAAAAERAGDGGAAGGGRDRRERGAAAGAVAEVTAAHRDTPFPPPPVISPLTPGTIAPGGSCTRTARRCCARPLFRAAPRPRRVTSAAAMEPRGAGEAVAAPARPLFGGCWSCRVLSGSALLLAALWIYQGPRRSMKRGVPPSLAAIAQITFAISVGAWGVVILVDPVGKQLRKEP
SIO_010081: LOC128901814
subclass of: SO_0000673
so part of: LOC128901814
location: join(74130..74331,74414..74908,75272..75339)
location: region:74130-75339:1
so has part: feature:74130-74331:1:exon
so has part: feature:74414-74908:1:exon
so has part: feature:75272-75339:1:exon

XP_054039945.1
type: Protein
SIO_000068: ncbiprotein

position:74130:1
position: 74130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75339:1
position: 75339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74130-74331:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:74414-74908:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:75272-75339:1:exon

LOC128901814
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: LOC128901814
product: ubiquinol-cytochrome-c reductase complex assembly factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_054183971.1
SIO_010081: LOC128901814
subclass of: SO_0000673
so part of: LOC128901814
location: join(74184..74331,74414..74583,75272..75341)
location: region:74184-75341:1
so has part: feature:74184-74331:1:exon
so has part: feature:74414-74583:1:exon
so has part: feature:75272-75341:1:exon

position:74184:1
position: 74184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75341:1
position: 75341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74184-74331:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:74414-74583:1:exon

position:74583:1
position: 74583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:75272-75341:1:exon

LOC128901814
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: LOC128901814
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquinol-cytochrome-c reductase complex assembly factor 3 isoform X2
translation: MEAARRWARALLRGAVPVAAGLLLWVAVGAGEERRQQTLKALPEVSPELLAQRRRQNELVMAALREAAETDENVARRPVPWRK
SIO_010081: LOC128901814
subclass of: SO_0000673
so part of: LOC128901814
location: join(74212..74331,74414..74545)
location: region:74212-74545:1
so has part: feature:74212-74331:1:exon
so has part: feature:74414-74545:1:exon

XP_054039946.1
type: Protein
SIO_000068: ncbiprotein

position:74212:1
position: 74212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74545:1
position: 74545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74212-74331:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:74414-74545:1:exon

UBXN1
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: UBXN1
note: UBX domain protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(75571..78739)
location: region:75571-78739:-1
so has part: feature:75571-78739:-1:exon
subclass of: SO_0000010

128901808
type: Gene
SIO_000068: ncbigene

position:75571:-1
position: 75571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78739:-1
position: 78739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75571-78739:-1:exon

UBXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: UBXN1
product: UBX domain protein 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_054183964.1
SIO_010081: UBXN1
subclass of: SO_0000673
so part of: UBXN1
location: complement(join(75571..75707,76072..76289,76596..76682,76901..76952,77340..77483,77866..78024,78129..78182,78438..78739))
location: region:75571-78739:-1
so has part: feature:78438-78739:-1:exon
so has part: feature:78129-78182:-1:exon
so has part: feature:77866-78024:-1:exon
so has part: feature:77340-77483:-1:exon
so has part: feature:76901-76952:-1:exon
so has part: feature:76596-76682:-1:exon
so has part: feature:76072-76289:-1:exon
so has part: feature:75571-75707:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78438-78739:-1:exon

position:78438:-1
position: 78438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:78129-78182:-1:exon

position:78129:-1
position: 78129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78182:-1
position: 78182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:77866-78024:-1:exon

position:77866:-1
position: 77866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78024:-1
position: 78024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:77340-77483:-1:exon

position:77340:-1
position: 77340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77483:-1
position: 77483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:76901-76952:-1:exon

position:76901:-1
position: 76901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76952:-1
position: 76952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:76596-76682:-1:exon

position:76596:-1
position: 76596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76682:-1
position: 76682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:76072-76289:-1:exon

position:76072:-1
position: 76072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76289:-1
position: 76289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:75571-75707:-1:exon

position:75707:-1
position: 75707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: UBXN1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: UBX domain-containing protein 1
translation: MARRELEALLEMGFGPRRAQRALELTGHRGIEPAMDWLVAHEDDPDLEDLEEDVPPPGGGDAGGDPGGDTTGGDTTGGPRPAAQDEEAQRLLELAGQERARRRRGQELGRLRQRLREEETRRAAAQRCRERAEERLARQRVREKIERDKAERAQKFGPAPAPPEPPPPGPRPPPQRDYEQSRIQVRLPDGRALTQSFRAREPLAAVRLFVQLQRDGGGAGGGRRRHPPSAEPFCLRTAFPPRRFTEEDMEKPLQELGLVPSAVLIVAKVEGS
SIO_010081: UBXN1
subclass of: SO_0000673
so part of: UBXN1
location: complement(join(75658..75707,76072..76289,76596..76682,76901..76952,77340..77483,77866..78024,78129..78182,78438..78493))
location: region:75658-78493:-1
so has part: feature:78438-78493:-1:exon
so has part: feature:78129-78182:-1:exon
so has part: feature:77866-78024:-1:exon
so has part: feature:77340-77483:-1:exon
so has part: feature:76901-76952:-1:exon
so has part: feature:76596-76682:-1:exon
so has part: feature:76072-76289:-1:exon
so has part: feature:75658-75707:-1:exon

XP_054039939.1
type: Protein
SIO_000068: ncbiprotein

position:75658:-1
position: 75658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78493:-1
position: 78493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78438-78493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78129-78182:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77866-78024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77340-77483:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:76901-76952:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:76596-76682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:76072-76289:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:75658-75707:-1:exon

BSCL2
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: BSCL2
note: BSCL2 lipid droplet biogenesis associated, seipin; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<79744..82900)
location: region:79744-82900:-1
so has part: feature:79744-82900:-1:exon
subclass of: SO_0000010

128901817
type: Gene
SIO_000068: ncbigene

position:79744:-1
position: 79744
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:82900:-1
position: 82900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79744-82900:-1:exon

BSCL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: BSCL2
product: BSCL2 lipid droplet biogenesis associated, seipin
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
transcript id: XM_054183975.1
SIO_010081: BSCL2
subclass of: SO_0000673
so part of: BSCL2
location: complement(join(<79744..79889,80228..80326,80421..80556,80788..80937,81264..81345,82518..82900))
location: region:79744-82900:-1
so has part: feature:82518-82900:-1:exon
so has part: feature:81264-81345:-1:exon
so has part: feature:80788-80937:-1:exon
so has part: feature:80421-80556:-1:exon
so has part: feature:80228-80326:-1:exon
so has part: feature:79744-79889:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82518-82900:-1:exon

position:82518:-1
position: 82518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:81264-81345:-1:exon

position:81264:-1
position: 81264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81345:-1
position: 81345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80788-80937:-1:exon

position:80788:-1
position: 80788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80937:-1
position: 80937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:80421-80556:-1:exon

position:80421:-1
position: 80421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80556:-1
position: 80556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:80228-80326:-1:exon

position:80228:-1
position: 80228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80326:-1
position: 80326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:79744-79889:-1:exon

position:79889:-1
position: 79889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BSCL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: BSCL2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: seipin
translation: MGPPPRRGASSSSSAVGPAVGPCPMAPWGRLWRGARRALLRGGVLACAALLLLWAAIFLYGSFYFSCLPPAALLRPVHFAFRTDCASPGPELCSFPTANVSLLGANRQAVLLYGQLYRISLELELPESPPNRALGMFMVNISCYGPAGRPLGPPPPAPYAMLHYRSPLLRTLHTVAFAGLFLAGFAEQTQTLEVELCSQYREDPYVPTAGAVLQIQSKRVQFYGARLRVHAEFSGIRYLLHHFPLTSALLGVAGNFTFLTLLLLAGTLRWGRGGLWGGSRPSPPS
SIO_010081: BSCL2
subclass of: SO_0000673
so part of: BSCL2
location: complement(join(<79744..79889,80228..80326,80421..80556,80788..80937,81264..81345,82518..82762))
location: region:79744-82762:-1
so has part: feature:82518-82762:-1:exon
so has part: feature:81264-81345:-1:exon
so has part: feature:80788-80937:-1:exon
so has part: feature:80421-80556:-1:exon
so has part: feature:80228-80326:-1:exon
so has part: feature:79744-79889:-1:exon

XP_054039950.1
type: Protein
SIO_000068: ncbiprotein

position:82762:-1
position: 82762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82518-82762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:81264-81345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80788-80937:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80421-80556:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:80228-80326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:79744-79889:-1:exon

HNRNPUL2
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: HNRNPUL2
note: heterogeneous nuclear ribonucleoprotein U like 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<83408..93486)
location: region:83408-93486:-1
so has part: feature:83408-93486:-1:exon
subclass of: SO_0000010

128901795
type: Gene
SIO_000068: ncbigene

position:83408:-1
position: 83408
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:93486:-1
position: 93486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83408-93486:-1:exon

HNRNPUL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: HNRNPUL2
product: heterogeneous nuclear ribonucleoprotein U like 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_054183943.1
SIO_010081: HNRNPUL2
subclass of: SO_0000673
so part of: HNRNPUL2
location: complement(join(<83408..83440,83529..83636,84337..84413,84795..84995,85078..85246,85955..86083,86776..86898,87553..87819,88605..88717,88806..88896,89493..89631,90933..91009,91145..91294,92557..93486))
location: region:83408-93486:-1
so has part: feature:92557-93486:-1:exon
so has part: feature:91145-91294:-1:exon
so has part: feature:90933-91009:-1:exon
so has part: feature:89493-89631:-1:exon
so has part: feature:88806-88896:-1:exon
so has part: feature:88605-88717:-1:exon
so has part: feature:87553-87819:-1:exon
so has part: feature:86776-86898:-1:exon
so has part: feature:85955-86083:-1:exon
so has part: feature:85078-85246:-1:exon
so has part: feature:84795-84995:-1:exon
so has part: feature:84337-84413:-1:exon
so has part: feature:83529-83636:-1:exon
so has part: feature:83408-83440:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92557-93486:-1:exon

position:92557:-1
position: 92557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:91145-91294:-1:exon

position:91145:-1
position: 91145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91294:-1
position: 91294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:90933-91009:-1:exon

position:90933:-1
position: 90933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91009:-1
position: 91009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:89493-89631:-1:exon

position:89493:-1
position: 89493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89631:-1
position: 89631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:88806-88896:-1:exon

position:88806:-1
position: 88806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88896:-1
position: 88896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:88605-88717:-1:exon

position:88605:-1
position: 88605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88717:-1
position: 88717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:87553-87819:-1:exon

position:87553:-1
position: 87553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87819:-1
position: 87819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:86776-86898:-1:exon

position:86776:-1
position: 86776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86898:-1
position: 86898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:85955-86083:-1:exon

position:85955:-1
position: 85955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86083:-1
position: 86083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:85078-85246:-1:exon

position:85078:-1
position: 85078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85246:-1
position: 85246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:84795-84995:-1:exon

position:84795:-1
position: 84795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84995:-1
position: 84995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:84337-84413:-1:exon

position:84337:-1
position: 84337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84413:-1
position: 84413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:83529-83636:-1:exon

position:83529:-1
position: 83529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83636:-1
position: 83636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:83408-83440:-1:exon

position:83440:-1
position: 83440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HNRNPUL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: HNRNPUL2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein U-like protein 2
translation: MDVKRLKVTELRAELGRRGLDSRGLKVELAQRLQEALDAEMLAAGPEEGGPAGPGACSGEAGPAGGPAAHRHGEEEEEEEEEEEEEEEEEEEDEEALLADEEEAAGGAPAAPGEAEAALPGPPEEEEEEEAAAAEEPAVEEPPQQEPEQQQQQQQQPPAAEPEPVAEAEGPESGGGVNGAERPQEEGPSGDEAAAAEAKEEGAQAGEEEEEKAKAGGADGERRGVKRQRDEKDEHGRDEHGRAYYEFREEAYNSRSKSPPPPEEEPREGEEDENLVILDTYTSDLHFRATRDRYGGQPLFFERFPSLWSGARGTHGVTXGRVCFEAKVTQHLPLKEGSPEVPLFRVGWSVDFSHSQLGEDEFSYGYDGRGLKVENGHFEEFGESFGESDVIGCFADFSGEELVELSFSKNGRELGPAFRVGKGALGGRPLLPHVLCKNVAVELNFGQKEQPFFPPPHGFLFLHALPPEERVRTALPPKTTQECEVVLMVGLPGAGKTQWAQQHSREHREKRYNILGTESVLHHMRPGGREEPVLDAQGRDQLAQRAAQCLSKLVQIAPRARRNFILDQCNVYNSGQRRKLLAFKGFWRRAVVIVANEEEWGRRLGLRRAAEGEDVPDSVMLEMKANYSLPEKSEYLDEVAFGELPKEEAQPLVAKYKEEARKLLPPAEKRQNRRNNRNKRNRNNRNRGQAYVGGQRRGYDNRVYGQQQYWGQPGNRGGYRNFYDRYRGDYDRFYGREYEYNRYRDYYRQYNREWQNYYQDRDRY
SIO_010081: HNRNPUL2
subclass of: SO_0000673
so part of: HNRNPUL2
location: complement(join(<83408..83440,83529..83636,84337..84413,84795..84995,85078..85246,85955..86083,86776..86898,87553..87819,88605..88717,88806..88896,89493..89631,90933..91009,91145..91294,92557..93172))
location: region:83408-93172:-1
so has part: feature:92557-93172:-1:exon
so has part: feature:91145-91294:-1:exon
so has part: feature:90933-91009:-1:exon
so has part: feature:89493-89631:-1:exon
so has part: feature:88806-88896:-1:exon
so has part: feature:88605-88717:-1:exon
so has part: feature:87553-87819:-1:exon
so has part: feature:86776-86898:-1:exon
so has part: feature:85955-86083:-1:exon
so has part: feature:85078-85246:-1:exon
so has part: feature:84795-84995:-1:exon
so has part: feature:84337-84413:-1:exon
so has part: feature:83529-83636:-1:exon
so has part: feature:83408-83440:-1:exon

XP_054039918.1
type: Protein
SIO_000068: ncbiprotein

position:93172:-1
position: 93172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92557-93172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91145-91294:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90933-91009:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89493-89631:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88806-88896:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88605-88717:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87553-87819:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:86776-86898:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85955-86083:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:85078-85246:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84795-84995:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:84337-84413:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:83529-83636:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83408-83440:-1:exon

LOC128901840
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: LOC128901840
note: U2 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(94600..94790)
location: region:94600-94790:-1
so has part: feature:94600-94790:-1:exon
subclass of: SO_0000623

128901840
type: Gene
SIO_000068: ncbigene

position:94600:-1
position: 94600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94790:-1
position: 94790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94600-94790:-1:exon

LOC128901840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 75485
nc RNA class: snRNA
gene: LOC128901840
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_008463540.1
SIO_010081: LOC128901840
subclass of: SO_0000673
so part of: LOC128901840
location: complement(94600..94790)
location: region:94600-94790:-1
so has part: feature:94600-94790:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:94600-94790:-1:exon

TAF6L
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: TAF6L
note: TATA-box binding protein associated factor 6 like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 95291..101815
location: region:95291-101815:1
so has part: feature:95291-101815:1:exon
subclass of: SO_0000010

128901824
type: Gene
SIO_000068: ncbigene

position:95291:1
position: 95291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101815:1
position: 101815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95291-101815:1:exon

TAF6L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: TAF6L
product: TATA-box binding protein associated factor 6 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_054183987.1
SIO_010081: TAF6L
subclass of: SO_0000673
so part of: TAF6L
location: join(95291..95656,95747..95833,96302..96452,96530..96580,96677..96771,96872..96937,97023..97243,99476..99608,99677..99805,100906..101815)
location: region:95291-101815:1
so has part: feature:95291-95656:1:exon
so has part: feature:95747-95833:1:exon
so has part: feature:96302-96452:1:exon
so has part: feature:96530-96580:1:exon
so has part: feature:96677-96771:1:exon
so has part: feature:96872-96937:1:exon
so has part: feature:97023-97243:1:exon
so has part: feature:99476-99608:1:exon
so has part: feature:99677-99805:1:exon
so has part: feature:100906-101815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95291-95656:1:exon

position:95656:1
position: 95656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:95747-95833:1:exon

position:95747:1
position: 95747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95833:1
position: 95833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:96302-96452:1:exon

position:96302:1
position: 96302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96452:1
position: 96452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:96530-96580:1:exon

position:96530:1
position: 96530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96580:1
position: 96580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:96677-96771:1:exon

position:96677:1
position: 96677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96771:1
position: 96771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:96872-96937:1:exon

position:96872:1
position: 96872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96937:1
position: 96937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:97023-97243:1:exon

position:97023:1
position: 97023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97243:1
position: 97243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:99476-99608:1:exon

position:99476:1
position: 99476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99608:1
position: 99608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:99677-99805:1:exon

position:99677:1
position: 99677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99805:1
position: 99805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:100906-101815:1:exon

position:100906:1
position: 100906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TAF6L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: TAF6L
product: TATA-box binding protein associated factor 6 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_054183986.1
SIO_010081: TAF6L
subclass of: SO_0000673
so part of: TAF6L
location: join(95294..95656,95747..95833,96302..96452,96530..96580,96677..96771,96872..96946,97023..97243,99476..99608,99677..99805,100906..101815)
location: region:95294-101815:1
so has part: feature:95294-95656:1:exon
so has part: feature:95747-95833:1:exon
so has part: feature:96302-96452:1:exon
so has part: feature:96530-96580:1:exon
so has part: feature:96677-96771:1:exon
so has part: feature:96872-96946:1:exon
so has part: feature:97023-97243:1:exon
so has part: feature:99476-99608:1:exon
so has part: feature:99677-99805:1:exon
so has part: feature:100906-101815:1:exon

position:95294:1
position: 95294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95294-95656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95747-95833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96302-96452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96530-96580:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96677-96771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96872-96946:1:exon

position:96946:1
position: 96946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:97023-97243:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99476-99608:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:99677-99805:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:100906-101815:1:exon

TAF6L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: TAF6L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1
translation: MAEREERRFVELPRESVRLMAESAGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTRRRKLTVEDFNRALRWSNVEAVCGYGSQDALPFRAIKEGELYFQEDREVNLVELALATNIPKGCAETAVRVHVSYLDGKGNLEPQGAVPSAVSTLTDDLLKYYQHVTRAVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLNRLLHIARSLIQNPFLCLGSYVRSLVGSVMYCALEPLAASINPLNDHWTLRDYAAMLLSRVFWTHGDLASGLYPQILLSLQKVLADPVRPLCSHYGAVAGLHALGWQAVERVLYPHLPTYWANLQAVLDDYSVSNAQVKADGHKVYGAILVAVERLLKMKAQQTPASGTSQRPEGSPRRSPRPEPPPEPGLGLGRPLLQLGGGGGPPASSPPASPTPSLRDMYRELYDFFGDSLATRFGTGLPPAAIPPPSTPEGTRKEPAAAFGGEGVTRKMPQLTANATVSPREEESPRCEPPAARPALHRPASLPRPRGAPRQPGGHRPGAREVFQKCRFAPRGAPRFSFIIAGRQAGRRCQGRMFQTSFPQHHGPGHVS
SIO_010081: TAF6L
subclass of: SO_0000673
so part of: TAF6L
location: join(95510..95656,95747..95833,96302..96452,96530..96580,96677..96771,96872..96946,97023..97243,99476..99608,99677..99805,100906..101577)
location: region:95510-101577:1
so has part: feature:95510-95656:1:exon
so has part: feature:95747-95833:1:exon
so has part: feature:96302-96452:1:exon
so has part: feature:96530-96580:1:exon
so has part: feature:96677-96771:1:exon
so has part: feature:96872-96946:1:exon
so has part: feature:97023-97243:1:exon
so has part: feature:99476-99608:1:exon
so has part: feature:99677-99805:1:exon
so has part: feature:100906-101577:1:exon

XP_054039961.1
type: Protein
SIO_000068: ncbiprotein

position:95510:1
position: 95510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101577:1
position: 101577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95510-95656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95747-95833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96302-96452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96530-96580:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96677-96771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96872-96946:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:97023-97243:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99476-99608:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:99677-99805:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:100906-101577:1:exon

TAF6L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: TAF6L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X2
translation: MAEREERRFVELPRESVRLMAESAGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTRRRKLTVEDFNRALRWSNVEAVCGYGSQDALPFRAIKEGELYFQEDREVNLVELALATNIPKGCAETAVRVHVSYLDGKGNLEPQGAVPSAVSTLTDDLLKYYQHVTRAVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVKSVSHDLEQLNRLLHIARSLIQNPFLCLGSYVRSLVGSVMYCALEPLAASINPLNDHWTLRDYAAMLLSRVFWTHGDLASGLYPQILLSLQKVLADPVRPLCSHYGAVAGLHALGWQAVERVLYPHLPTYWANLQAVLDDYSVSNAQVKADGHKVYGAILVAVERLLKMKAQQTPASGTSQRPEGSPRRSPRPEPPPEPGLGLGRPLLQLGGGGGPPASSPPASPTPSLRDMYRELYDFFGDSLATRFGTGLPPAAIPPPSTPEGTRKEPAAAFGGEGVTRKMPQLTANATVSPREEESPRCEPPAARPALHRPASLPRPRGAPRQPGGHRPGAREVFQKCRFAPRGAPRFSFIIAGRQAGRRCQGRMFQTSFPQHHGPGHVS
SIO_010081: TAF6L
subclass of: SO_0000673
so part of: TAF6L
location: join(95510..95656,95747..95833,96302..96452,96530..96580,96677..96771,96872..96937,97023..97243,99476..99608,99677..99805,100906..101577)
location: region:95510-101577:1
so has part: feature:95510-95656:1:exon
so has part: feature:95747-95833:1:exon
so has part: feature:96302-96452:1:exon
so has part: feature:96530-96580:1:exon
so has part: feature:96677-96771:1:exon
so has part: feature:96872-96937:1:exon
so has part: feature:97023-97243:1:exon
so has part: feature:99476-99608:1:exon
so has part: feature:99677-99805:1:exon
so has part: feature:100906-101577:1:exon

XP_054039962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95510-95656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95747-95833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96302-96452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96530-96580:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96677-96771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96872-96937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:97023-97243:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99476-99608:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:99677-99805:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:100906-101577:1:exon

TMEM179B
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: TMEM179B
note: transmembrane protein 179B; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 102125..104580
location: region:102125-104580:1
so has part: feature:102125-104580:1:exon
subclass of: SO_0000010

128901812
type: Gene
SIO_000068: ncbigene

position:102125:1
position: 102125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104580:1
position: 104580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102125-104580:1:exon

TMEM179B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: TMEM179B
product: transmembrane protein 179B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_054183968.1
SIO_010081: TMEM179B
subclass of: SO_0000673
so part of: TMEM179B
location: join(102125..102532,102975..103162,103270..103404,103501..103576,104106..104580)
location: region:102125-104580:1
so has part: feature:102125-102532:1:exon
so has part: feature:102975-103162:1:exon
so has part: feature:103270-103404:1:exon
so has part: feature:103501-103576:1:exon
so has part: feature:104106-104580:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:102125-102532:1:exon

position:102532:1
position: 102532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:102975-103162:1:exon

position:102975:1
position: 102975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103162:1
position: 103162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:103270-103404:1:exon

position:103270:1
position: 103270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103404:1
position: 103404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:103501-103576:1:exon

position:103501:1
position: 103501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103576:1
position: 103576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:104106-104580:1:exon

position:104106:1
position: 104106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM179B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: TMEM179B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 179B
translation: MAVSVLLLAELALHGAAFLCGIVCASALTVAQGEFGGQCLLYGVVSWNGTALVPRSFSHVSLCYFVSGVSIVVALYSFSSLLHGAYSCCTGESQRDRTWLSIALVIAFVVLFFLLVSACVLRVGTDALCTSLLQTQSLASCREAEQKPWVSYSPSRFYSNLYSAQASAWVSVFLWCLLTTRLLLQRRRDAPFPLLRRHDPEWSAETEAIFGGRPVRP
SIO_010081: TMEM179B
subclass of: SO_0000673
so part of: TMEM179B
location: join(102437..102532,102975..103162,103270..103404,103501..103576,104106..104264)
location: region:102437-104264:1
so has part: feature:102437-102532:1:exon
so has part: feature:102975-103162:1:exon
so has part: feature:103270-103404:1:exon
so has part: feature:103501-103576:1:exon
so has part: feature:104106-104264:1:exon

XP_054039943.1
type: Protein
SIO_000068: ncbiprotein

position:102437:1
position: 102437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104264:1
position: 104264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102437-102532:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102975-103162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103270-103404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103501-103576:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104106-104264:1:exon

LOC128901838
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: LOC128901838
note: U2 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(105754..105944)
location: region:105754-105944:-1
so has part: feature:105754-105944:-1:exon
subclass of: SO_0000623

128901838
type: Gene
SIO_000068: ncbigene

position:105754:-1
position: 105754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105944:-1
position: 105944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105754-105944:-1:exon

LOC128901838
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 75485
nc RNA class: snRNA
gene: LOC128901838
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_008463538.1
SIO_010081: LOC128901838
subclass of: SO_0000673
so part of: LOC128901838
location: complement(105754..105944)
location: region:105754-105944:-1
so has part: feature:105754-105944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:105754-105944:-1:exon

LOC128901823
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: LOC128901823
note: uncharacterized LOC128901823; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 106797..109507
location: region:106797-109507:1
so has part: feature:106797-109507:1:exon
subclass of: SO_0000011

128901823
type: Gene
SIO_000068: ncbigene

position:106797:1
position: 106797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109507:1
position: 109507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106797-109507:1:exon

LOC128901823
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 75485
nc RNA class: lncRNA
gene: LOC128901823
product: uncharacterized LOC128901823, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008463530.1
SIO_010081: LOC128901823
subclass of: SO_0000673
so part of: LOC128901823
location: join(106797..106861,107308..107341,107582..107624,107933..108047,108259..108408,108517..108542,108819..108852,109073..109099,109420..109507)
location: region:106797-109507:1
so has part: feature:106797-106861:1:exon
so has part: feature:107308-107341:1:exon
so has part: feature:107582-107624:1:exon
so has part: feature:107933-108047:1:exon
so has part: feature:108259-108408:1:exon
so has part: feature:108517-108542:1:exon
so has part: feature:108819-108852:1:exon
so has part: feature:109073-109099:1:exon
so has part: feature:109420-109507:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106797-106861:1:exon

position:106861:1
position: 106861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:107308-107341:1:exon

position:107308:1
position: 107308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107341:1
position: 107341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107582-107624:1:exon

position:107582:1
position: 107582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107624:1
position: 107624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:107933-108047:1:exon

position:107933:1
position: 107933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108047:1
position: 108047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:108259-108408:1:exon

position:108259:1
position: 108259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108408:1
position: 108408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:108517-108542:1:exon

position:108517:1
position: 108517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108542:1
position: 108542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:108819-108852:1:exon

position:108819:1
position: 108819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108852:1
position: 108852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:109073-109099:1:exon

position:109073:1
position: 109073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109099:1
position: 109099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:109420-109507:1:exon

position:109420:1
position: 109420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128901823
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 75485
nc RNA class: lncRNA
gene: LOC128901823
product: uncharacterized LOC128901823, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008463529.1
SIO_010081: LOC128901823
subclass of: SO_0000673
so part of: LOC128901823
location: join(106797..106861,107308..107341,107582..107624,107933..108047,108259..108351,108517..108542,108819..108852,109073..109099,109420..109504)
location: region:106797-109504:1
so has part: feature:106797-106861:1:exon
so has part: feature:107308-107341:1:exon
so has part: feature:107582-107624:1:exon
so has part: feature:107933-108047:1:exon
so has part: feature:108259-108351:1:exon
so has part: feature:108517-108542:1:exon
so has part: feature:108819-108852:1:exon
so has part: feature:109073-109099:1:exon
so has part: feature:109420-109504:1:exon

position:109504:1
position: 109504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106797-106861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107308-107341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107582-107624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107933-108047:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108259-108351:1:exon

position:108351:1
position: 108351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:108517-108542:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108819-108852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:109073-109099:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109420-109504:1:exon

LOC128901823
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 75485
nc RNA class: lncRNA
gene: LOC128901823
product: uncharacterized LOC128901823, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008463531.1
SIO_010081: LOC128901823
subclass of: SO_0000673
so part of: LOC128901823
location: join(106797..106861,107308..107341,107582..107624,107933..108047,108259..108351,108517..108542,108819..108852,109420..109479)
location: region:106797-109479:1
so has part: feature:106797-106861:1:exon
so has part: feature:107308-107341:1:exon
so has part: feature:107582-107624:1:exon
so has part: feature:107933-108047:1:exon
so has part: feature:108259-108351:1:exon
so has part: feature:108517-108542:1:exon
so has part: feature:108819-108852:1:exon
so has part: feature:109420-109479:1:exon

position:109479:1
position: 109479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106797-106861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107308-107341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107582-107624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107933-108047:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108259-108351:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108517-108542:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108819-108852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:109420-109479:1:exon

LOC128901835
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: LOC128901835
note: small nucleolar RNA SNORD22; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 108291..108419
location: region:108291-108419:1
so has part: feature:108291-108419:1:exon
subclass of: SO_0000578

128901835
type: Gene
SIO_000068: ncbigene

position:108291:1
position: 108291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108419:1
position: 108419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108291-108419:1:exon

LOC128901835
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 75485
nc RNA class: snoRNA
gene: LOC128901835
product: small nucleolar RNA SNORD22
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00099
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_008463535.1
SIO_010081: LOC128901835
subclass of: SO_0000673
so part of: LOC128901835
location: 108291..108419
location: region:108291-108419:1
so has part: feature:108291-108419:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108291-108419:1:exon

WDR74
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: WDR74
note: WD repeat domain 74; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 109869..113446
location: region:109869-113446:1
so has part: feature:109869-113446:1:exon
subclass of: SO_0000010

128901804
type: Gene
SIO_000068: ncbigene

position:109869:1
position: 109869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113446:1
position: 113446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109869-113446:1:exon

WDR74
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: WDR74
product: WD repeat domain 74
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_054183958.1
SIO_010081: WDR74
subclass of: SO_0000673
so part of: WDR74
location: join(109869..110034,110462..110568,110642..110763,110862..110925,111011..111160,111254..111355,111442..111542,112112..112167,112307..112450,113034..113090,113184..113446)
location: region:109869-113446:1
so has part: feature:109869-110034:1:exon
so has part: feature:110462-110568:1:exon
so has part: feature:110642-110763:1:exon
so has part: feature:110862-110925:1:exon
so has part: feature:111011-111160:1:exon
so has part: feature:111254-111355:1:exon
so has part: feature:111442-111542:1:exon
so has part: feature:112112-112167:1:exon
so has part: feature:112307-112450:1:exon
so has part: feature:113034-113090:1:exon
so has part: feature:113184-113446:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109869-110034:1:exon

position:110034:1
position: 110034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:110462-110568:1:exon

position:110462:1
position: 110462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110568:1
position: 110568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:110642-110763:1:exon

position:110642:1
position: 110642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110763:1
position: 110763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:110862-110925:1:exon

position:110862:1
position: 110862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110925:1
position: 110925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:111011-111160:1:exon

position:111011:1
position: 111011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111160:1
position: 111160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:111254-111355:1:exon

position:111254:1
position: 111254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111355:1
position: 111355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:111442-111542:1:exon

position:111442:1
position: 111442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111542:1
position: 111542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:112112-112167:1:exon

position:112112:1
position: 112112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112167:1
position: 112167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:112307-112450:1:exon

position:112307:1
position: 112307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112450:1
position: 112450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:113034-113090:1:exon

position:113034:1
position: 113034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113090:1
position: 113090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:113184-113446:1:exon

position:113184:1
position: 113184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDR74
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: WDR74
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: WD repeat-containing protein 74
translation: MRVRLETVSHPEPYAAGSGANPEHGEASDRDKMASPARGSHVWVGAETGALKGVNLKKKQATNYASSSGLSRGDGVCAMCWGDPSESEILVGCLDRSVKLFSAEKRKFTESRLCPGGDGPFCGLAVSGSAIITCVESGLIKVWCDDETENAQLELAAGAGLCRMRQDPTRPQRLGTGGKENGLKVWDLQRPQEPVFRAKNVRNDWLDLRVPIWDRDLQFLPGSEKIVTCTAHHQVRLYDPSSPQRRPVLETTFGEAPLTALAVVPGGTSVVVGSARGDVAVIDLRQGRVLKCLKGFAGGVRGLQCHPTLPLVASCGLDRFLRVHHLGDKRLRHKVYLKSRLTCLLLSTQRDWEAEEEPPPPARGEGRGGGTRCGTPWRPSPPPAKRGKKRKILGP
SIO_010081: WDR74
subclass of: SO_0000673
so part of: WDR74
location: join(109878..110034,110462..110568,110642..110763,110862..110925,111011..111160,111254..111355,111442..111542,112112..112167,112307..112450,113034..113090,113184..113312)
location: region:109878-113312:1
so has part: feature:109878-110034:1:exon
so has part: feature:110462-110568:1:exon
so has part: feature:110642-110763:1:exon
so has part: feature:110862-110925:1:exon
so has part: feature:111011-111160:1:exon
so has part: feature:111254-111355:1:exon
so has part: feature:111442-111542:1:exon
so has part: feature:112112-112167:1:exon
so has part: feature:112307-112450:1:exon
so has part: feature:113034-113090:1:exon
so has part: feature:113184-113312:1:exon

XP_054039933.1
type: Protein
SIO_000068: ncbiprotein

position:109878:1
position: 109878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113312:1
position: 113312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109878-110034:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:110462-110568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:110642-110763:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:110862-110925:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:111011-111160:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111254-111355:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111442-111542:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:112112-112167:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112307-112450:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:113034-113090:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:113184-113312:1:exon

FAU
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: FAU
note: FAU ubiquitin like and ribosomal protein S30 fusion; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(114009..127096)
location: region:114009-127096:-1
so has part: feature:114009-127096:-1:exon
subclass of: SO_0000010

128901802
type: Gene
SIO_000068: ncbigene

position:114009:-1
position: 114009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127096:-1
position: 127096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114009-127096:-1:exon

FAU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: FAU
product: FAU ubiquitin like and ribosomal protein S30 fusion, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054183951.1
SIO_010081: FAU
subclass of: SO_0000673
so part of: FAU
location: complement(join(114009..114188,114303..114358,114454..114598,114696..114776,118654..118780,119419..119493,119593..119777,120425..120693,121565..121691,123359..123523,123633..123740,123821..124013,124546..124713,124800..124918,125607..125732,126176..126474,126985..127096))
location: region:114009-127096:-1
so has part: feature:126985-127096:-1:exon
so has part: feature:126176-126474:-1:exon
so has part: feature:125607-125732:-1:exon
so has part: feature:124800-124918:-1:exon
so has part: feature:124546-124713:-1:exon
so has part: feature:123821-124013:-1:exon
so has part: feature:123633-123740:-1:exon
so has part: feature:123359-123523:-1:exon
so has part: feature:121565-121691:-1:exon
so has part: feature:120425-120693:-1:exon
so has part: feature:119593-119777:-1:exon
so has part: feature:119419-119493:-1:exon
so has part: feature:118654-118780:-1:exon
so has part: feature:114696-114776:-1:exon
so has part: feature:114454-114598:-1:exon
so has part: feature:114303-114358:-1:exon
so has part: feature:114009-114188:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126985-127096:-1:exon

position:126985:-1
position: 126985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:126176-126474:-1:exon

position:126176:-1
position: 126176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126474:-1
position: 126474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:125607-125732:-1:exon

position:125607:-1
position: 125607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125732:-1
position: 125732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:124800-124918:-1:exon

position:124800:-1
position: 124800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124918:-1
position: 124918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:124546-124713:-1:exon

position:124546:-1
position: 124546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124713:-1
position: 124713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:123821-124013:-1:exon

position:123821:-1
position: 123821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124013:-1
position: 124013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:123633-123740:-1:exon

position:123633:-1
position: 123633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123740:-1
position: 123740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:123359-123523:-1:exon

position:123359:-1
position: 123359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123523:-1
position: 123523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:121565-121691:-1:exon

position:121565:-1
position: 121565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121691:-1
position: 121691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:120425-120693:-1:exon

position:120425:-1
position: 120425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120693:-1
position: 120693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:119593-119777:-1:exon

position:119593:-1
position: 119593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119777:-1
position: 119777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:119419-119493:-1:exon

position:119419:-1
position: 119419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119493:-1
position: 119493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:118654-118780:-1:exon

position:118654:-1
position: 118654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118780:-1
position: 118780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:114696-114776:-1:exon

position:114696:-1
position: 114696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114776:-1
position: 114776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:114454-114598:-1:exon

position:114454:-1
position: 114454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114598:-1
position: 114598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:114303-114358:-1:exon

position:114303:-1
position: 114303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114358:-1
position: 114358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:114009-114188:-1:exon

position:114188:-1
position: 114188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: FAU
product: FAU ubiquitin like and ribosomal protein S30 fusion, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054183950.1
SIO_010081: FAU
subclass of: SO_0000673
so part of: FAU
location: complement(join(114009..114188,114303..114358,114454..114598,114696..114776,118654..118780,119419..119493,119593..119777,120425..120693,121565..121691,123359..123523,123633..123740,123821..124013,124546..124713,124800..124918,125607..125732,126176..126474,126973..127096))
location: region:114009-127096:-1
so has part: feature:126973-127096:-1:exon
so has part: feature:126176-126474:-1:exon
so has part: feature:125607-125732:-1:exon
so has part: feature:124800-124918:-1:exon
so has part: feature:124546-124713:-1:exon
so has part: feature:123821-124013:-1:exon
so has part: feature:123633-123740:-1:exon
so has part: feature:123359-123523:-1:exon
so has part: feature:121565-121691:-1:exon
so has part: feature:120425-120693:-1:exon
so has part: feature:119593-119777:-1:exon
so has part: feature:119419-119493:-1:exon
so has part: feature:118654-118780:-1:exon
so has part: feature:114696-114776:-1:exon
so has part: feature:114454-114598:-1:exon
so has part: feature:114303-114358:-1:exon
so has part: feature:114009-114188:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126973-127096:-1:exon

position:126973:-1
position: 126973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:126176-126474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125607-125732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:124800-124918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:124546-124713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:123821-124013:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123633-123740:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:123359-123523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121565-121691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:120425-120693:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:119593-119777:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:119419-119493:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:118654-118780:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:114696-114776:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:114454-114598:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:114303-114358:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:114009-114188:-1:exon

FAU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: FAU
product: FAU ubiquitin like and ribosomal protein S30 fusion, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054183953.1
SIO_010081: FAU
subclass of: SO_0000673
so part of: FAU
location: complement(join(114009..114188,114303..114358,114454..114598,114696..114776,115923..116035))
location: region:114009-116035:-1
so has part: feature:115923-116035:-1:exon
so has part: feature:114696-114776:-1:exon
so has part: feature:114454-114598:-1:exon
so has part: feature:114303-114358:-1:exon
so has part: feature:114009-114188:-1:exon

position:116035:-1
position: 116035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115923-116035:-1:exon

position:115923:-1
position: 115923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:114696-114776:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114454-114598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114303-114358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114009-114188:-1:exon

FAU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: FAU
product: FAU ubiquitin like and ribosomal protein S30 fusion, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054183954.1
SIO_010081: FAU
subclass of: SO_0000673
so part of: FAU
location: complement(join(114009..114188,114303..114358,114454..114598,114696..114776,115918..115990))
location: region:114009-115990:-1
so has part: feature:115918-115990:-1:exon
so has part: feature:114696-114776:-1:exon
so has part: feature:114454-114598:-1:exon
so has part: feature:114303-114358:-1:exon
so has part: feature:114009-114188:-1:exon

position:115990:-1
position: 115990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115918-115990:-1:exon

position:115918:-1
position: 115918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:114696-114776:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114454-114598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114303-114358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114009-114188:-1:exon

FAU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: FAU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAU ubiquitin-like and ribosomal protein S30 isoform X2
translation: MAAEGPEAPASPGRGGTEGALGDGGDGGTGPPAPVAELPPPAPSPAEEEPSDAAVPPPVPQSCNGAAIAPPEPEEPPPAAPEEPPPPRDPEPPAEEPPLTYPLDFEKFWLAARNNPHDFTAWTELLQYVEQENHLFAARKAFDAFFAHYPYCYGYWKKYADMERRFDCSRETEEVFERGLQSIPLSMDLWIHYISYLQSTLDMNLPESIQKIRGVFEAAVAAAGMDFRSDKLWELYVEWEREQGDLRAVTGIYDRVLSMPTQLYNHHWEKFKEHVLHNPPKDILSPEELLWVQSKLATDPVPKPPEPEATEAPPGEDLPPGVEGKAAAAAADAQEDLDQEKIRELVISMRQQIYAQNEAEVSKRWNFEDGIKRPYFHVKPLERAQLRNWRDYLDYEMAAGSHERTIVLFERCVIACALYEEFWIKYTKYLENHTVAGARSVFQRACGYHLPRKPNIHLLWAAFEEKQGNLDEARRILRCFEEVVPGLAMVRLRRVSLERRQGNLEEAEALLLEAMRANEGLPLASFYAVKLARQACKVQKNLGKARKVLVEALEKDPDNARLHANLLEMEFGADVRQNEGNTMSCFERALRSPLPDEAKLIFSQRRVEFLEDFGSSIHSLLTAYDEHQKILKQHAARKRAPENGSDEPDDKRLRPDEASGLLGPLNFSGTGGDMGSNPSAYNYWYQVTMQLFIRAQSLHTIEVSGAETIAQIKAQVAALAGVPPEDQVLSFGGTPLDDDTVLGQSPLPEFATLELSTRLLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS
SIO_010081: FAU
subclass of: SO_0000673
so part of: FAU
location: complement(join(114063..114188,114303..114358,114454..114598,114696..114776,118654..118780,119419..119493,119593..119777,120425..120693,121565..121691,123359..123523,123633..123740,123821..124013,124546..124713,124800..124918,125607..125732,126176..126474,126985..127081))
location: region:114063-127081:-1
so has part: feature:126985-127081:-1:exon
so has part: feature:126176-126474:-1:exon
so has part: feature:125607-125732:-1:exon
so has part: feature:124800-124918:-1:exon
so has part: feature:124546-124713:-1:exon
so has part: feature:123821-124013:-1:exon
so has part: feature:123633-123740:-1:exon
so has part: feature:123359-123523:-1:exon
so has part: feature:121565-121691:-1:exon
so has part: feature:120425-120693:-1:exon
so has part: feature:119593-119777:-1:exon
so has part: feature:119419-119493:-1:exon
so has part: feature:118654-118780:-1:exon
so has part: feature:114696-114776:-1:exon
so has part: feature:114454-114598:-1:exon
so has part: feature:114303-114358:-1:exon
so has part: feature:114063-114188:-1:exon

XP_054039926.1
type: Protein
SIO_000068: ncbiprotein

position:114063:-1
position: 114063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127081:-1
position: 127081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126985-127081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126176-126474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125607-125732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:124800-124918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:124546-124713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:123821-124013:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123633-123740:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:123359-123523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121565-121691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:120425-120693:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:119593-119777:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:119419-119493:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:118654-118780:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:114696-114776:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:114454-114598:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:114303-114358:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:114063-114188:-1:exon

FAU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: FAU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAU ubiquitin-like and ribosomal protein S30 isoform X1
translation: MAAEGPEAPASPGRGGTEGALGDGGDGGTGPPGEAGAPVAELPPPAPSPAEEEPSDAAVPPPVPQSCNGAAIAPPEPEEPPPAAPEEPPPPRDPEPPAEEPPLTYPLDFEKFWLAARNNPHDFTAWTELLQYVEQENHLFAARKAFDAFFAHYPYCYGYWKKYADMERRFDCSRETEEVFERGLQSIPLSMDLWIHYISYLQSTLDMNLPESIQKIRGVFEAAVAAAGMDFRSDKLWELYVEWEREQGDLRAVTGIYDRVLSMPTQLYNHHWEKFKEHVLHNPPKDILSPEELLWVQSKLATDPVPKPPEPEATEAPPGEDLPPGVEGKAAAAAADAQEDLDQEKIRELVISMRQQIYAQNEAEVSKRWNFEDGIKRPYFHVKPLERAQLRNWRDYLDYEMAAGSHERTIVLFERCVIACALYEEFWIKYTKYLENHTVAGARSVFQRACGYHLPRKPNIHLLWAAFEEKQGNLDEARRILRCFEEVVPGLAMVRLRRVSLERRQGNLEEAEALLLEAMRANEGLPLASFYAVKLARQACKVQKNLGKARKVLVEALEKDPDNARLHANLLEMEFGADVRQNEGNTMSCFERALRSPLPDEAKLIFSQRRVEFLEDFGSSIHSLLTAYDEHQKILKQHAARKRAPENGSDEPDDKRLRPDEASGLLGPLNFSGTGGDMGSNPSAYNYWYQVTMQLFIRAQSLHTIEVSGAETIAQIKAQVAALAGVPPEDQVLSFGGTPLDDDTVLGQSPLPEFATLELSTRLLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS
SIO_010081: FAU
subclass of: SO_0000673
so part of: FAU
location: complement(join(114063..114188,114303..114358,114454..114598,114696..114776,118654..118780,119419..119493,119593..119777,120425..120693,121565..121691,123359..123523,123633..123740,123821..124013,124546..124713,124800..124918,125607..125732,126176..126474,126973..127081))
location: region:114063-127081:-1
so has part: feature:126973-127081:-1:exon
so has part: feature:126176-126474:-1:exon
so has part: feature:125607-125732:-1:exon
so has part: feature:124800-124918:-1:exon
so has part: feature:124546-124713:-1:exon
so has part: feature:123821-124013:-1:exon
so has part: feature:123633-123740:-1:exon
so has part: feature:123359-123523:-1:exon
so has part: feature:121565-121691:-1:exon
so has part: feature:120425-120693:-1:exon
so has part: feature:119593-119777:-1:exon
so has part: feature:119419-119493:-1:exon
so has part: feature:118654-118780:-1:exon
so has part: feature:114696-114776:-1:exon
so has part: feature:114454-114598:-1:exon
so has part: feature:114303-114358:-1:exon
so has part: feature:114063-114188:-1:exon

XP_054039925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126973-127081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126176-126474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125607-125732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:124800-124918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:124546-124713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:123821-124013:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123633-123740:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:123359-123523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121565-121691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:120425-120693:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:119593-119777:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:119419-119493:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:118654-118780:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:114696-114776:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:114454-114598:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:114303-114358:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:114063-114188:-1:exon

FAU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: FAU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAU ubiquitin-like and ribosomal protein S30 isoform X4
translation: MQLFIRAQSLHTIEVSGAETIAQIKAQVAALAGVPPEDQVLSFGGTPLDDDTVLGQSPLPEFATLELSTRLLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS
SIO_010081: FAU
subclass of: SO_0000673
so part of: FAU
location: complement(join(114063..114188,114303..114358,114454..114598,114696..114770))
location: region:114063-114770:-1
so has part: feature:114696-114770:-1:exon
so has part: feature:114454-114598:-1:exon
so has part: feature:114303-114358:-1:exon
so has part: feature:114063-114188:-1:exon

XP_054039928.1
type: Protein
SIO_000068: ncbiprotein

position:114770:-1
position: 114770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114696-114770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114454-114598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114303-114358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114063-114188:-1:exon

FAU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: FAU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAU ubiquitin-like and ribosomal protein S30 isoform X4
translation: MQLFIRAQSLHTIEVSGAETIAQIKAQVAALAGVPPEDQVLSFGGTPLDDDTVLGQSPLPEFATLELSTRLLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS
SIO_010081: FAU
subclass of: SO_0000673
so part of: FAU
location: complement(join(114063..114188,114303..114358,114454..114598,114696..114770))
location: region:114063-114770:-1
so has part: feature:114696-114770:-1:exon
so has part: feature:114454-114598:-1:exon
so has part: feature:114303-114358:-1:exon
so has part: feature:114063-114188:-1:exon

XP_054039929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114696-114770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114454-114598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114303-114358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114063-114188:-1:exon

MRPL49
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: MRPL49
note: mitochondrial ribosomal protein L49; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 116064..117982
location: region:116064-117982:1
so has part: feature:116064-117982:1:exon
subclass of: SO_0000010

128901807
type: Gene
SIO_000068: ncbigene

position:116064:1
position: 116064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117982:1
position: 117982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116064-117982:1:exon

MRPL49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: MRPL49
product: mitochondrial ribosomal protein L49
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_054183963.1
SIO_010081: MRPL49
subclass of: SO_0000673
so part of: MRPL49
location: join(116064..116118,116772..116929,117469..117592,117698..117982)
location: region:116064-117982:1
so has part: feature:116064-116118:1:exon
so has part: feature:116772-116929:1:exon
so has part: feature:117469-117592:1:exon
so has part: feature:117698-117982:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:116064-116118:1:exon

position:116118:1
position: 116118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:116772-116929:1:exon

position:116772:1
position: 116772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116929:1
position: 116929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:117469-117592:1:exon

position:117469:1
position: 117469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117592:1
position: 117592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:117698-117982:1:exon

position:117698:1
position: 117698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: MRPL49
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: 39S ribosomal protein L49, mitochondrial
translation: MAAMAAXGRRLRALGRAVGPAEAPPDPHPPQLEESTADYAFVERLLPPTRIPDPPPHPTYPTPSGWSPPKGPPPALPYFVRRSRLHNLPVYRRLVKGNRRLTELRHVEGDIWALERELRAFLGVPDLEVQVNEVTGSLQLKGHWERELRDWLLQRGF
SIO_010081: MRPL49
subclass of: SO_0000673
so part of: MRPL49
location: join(116064..116118,116772..116929,117469..117592,117698..117835)
location: region:116064-117835:1
so has part: feature:116064-116118:1:exon
so has part: feature:116772-116929:1:exon
so has part: feature:117469-117592:1:exon
so has part: feature:117698-117835:1:exon

XP_054039938.1
type: Protein
SIO_000068: ncbiprotein

position:117835:1
position: 117835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116064-116118:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:116772-116929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:117469-117592:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117698-117835:1:exon

FAU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: FAU
product: FAU ubiquitin like and ribosomal protein S30 fusion, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054183952.1
SIO_010081: FAU
subclass of: SO_0000673
so part of: FAU
location: complement(join(118323..118571,118654..118780,119419..119493,119593..119777,120425..120693,121565..121691,123359..123523,123633..123740,123821..124013,124546..124713,124800..124918,125607..125732,126176..126474,126973..127096))
location: region:118323-127096:-1
so has part: feature:126973-127096:-1:exon
so has part: feature:126176-126474:-1:exon
so has part: feature:125607-125732:-1:exon
so has part: feature:124800-124918:-1:exon
so has part: feature:124546-124713:-1:exon
so has part: feature:123821-124013:-1:exon
so has part: feature:123633-123740:-1:exon
so has part: feature:123359-123523:-1:exon
so has part: feature:121565-121691:-1:exon
so has part: feature:120425-120693:-1:exon
so has part: feature:119593-119777:-1:exon
so has part: feature:119419-119493:-1:exon
so has part: feature:118654-118780:-1:exon
so has part: feature:118323-118571:-1:exon

position:118323:-1
position: 118323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126973-127096:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126176-126474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125607-125732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:124800-124918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:124546-124713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:123821-124013:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123633-123740:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:123359-123523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121565-121691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:120425-120693:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:119593-119777:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:119419-119493:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:118654-118780:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:118323-118571:-1:exon

position:118571:-1
position: 118571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: FAU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAU ubiquitin-like and ribosomal protein S30 isoform X3
translation: MAAEGPEAPASPGRGGTEGALGDGGDGGTGPPGEAGAPVAELPPPAPSPAEEEPSDAAVPPPVPQSCNGAAIAPPEPEEPPPAAPEEPPPPRDPEPPAEEPPLTYPLDFEKFWLAARNNPHDFTAWTELLQYVEQENHLFAARKAFDAFFAHYPYCYGYWKKYADMERRFDCSRETEEVFERGLQSIPLSMDLWIHYISYLQSTLDMNLPESIQKIRGVFEAAVAAAGMDFRSDKLWELYVEWEREQGDLRAVTGIYDRVLSMPTQLYNHHWEKFKEHVLHNPPKDILSPEELLWVQSKLATDPVPKPPEPEATEAPPGEDLPPGVEGKAAAAAADAQEDLDQEKIRELVISMRQQIYAQNEAEVSKRWNFEDGIKRPYFHVKPLERAQLRNWRDYLDYEMAAGSHERTIVLFERCVIACALYEEFWIKYTKYLENHTVAGARSVFQRACGYHLPRKPNIHLLWAAFEEKQGNLDEARRILRCFEEVVPGLAMVRLRRVSLERRQGNLEEAEALLLEAMRANEGLPLASFYAVKLARQACKVQKNLGKARKVLVEALEKDPDNARLHANLLEMEFGADVRQNEGNTMSCFERALRSPLPDEAKLIFSQRRVEFLEDFGSSIHSLLTAYDEHQKILKQHAARKRAPENGSDEPDDKRLRPDEASGLLGPLNFSGTGGDMGSNPSAYNYWYQHGYGTYSYQTPWNYNQYYSQS
SIO_010081: FAU
subclass of: SO_0000673
so part of: FAU
location: complement(join(118506..118571,118654..118780,119419..119493,119593..119777,120425..120693,121565..121691,123359..123523,123633..123740,123821..124013,124546..124713,124800..124918,125607..125732,126176..126474,126973..127081))
location: region:118506-127081:-1
so has part: feature:126973-127081:-1:exon
so has part: feature:126176-126474:-1:exon
so has part: feature:125607-125732:-1:exon
so has part: feature:124800-124918:-1:exon
so has part: feature:124546-124713:-1:exon
so has part: feature:123821-124013:-1:exon
so has part: feature:123633-123740:-1:exon
so has part: feature:123359-123523:-1:exon
so has part: feature:121565-121691:-1:exon
so has part: feature:120425-120693:-1:exon
so has part: feature:119593-119777:-1:exon
so has part: feature:119419-119493:-1:exon
so has part: feature:118654-118780:-1:exon
so has part: feature:118506-118571:-1:exon

XP_054039927.1
type: Protein
SIO_000068: ncbiprotein

position:118506:-1
position: 118506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126973-127081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126176-126474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125607-125732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:124800-124918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:124546-124713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:123821-124013:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123633-123740:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:123359-123523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121565-121691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:120425-120693:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:119593-119777:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:119419-119493:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:118654-118780:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:118506-118571:-1:exon

SYVN1
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: SYVN1
note: synoviolin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(127456..137033)
location: region:127456-137033:-1
so has part: feature:127456-137033:-1:exon
subclass of: SO_0000010

128901803
type: Gene
SIO_000068: ncbigene

position:127456:-1
position: 127456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137033:-1
position: 137033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127456-137033:-1:exon

SYVN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: SYVN1
product: synoviolin 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054183955.1
SIO_010081: SYVN1
subclass of: SO_0000673
so part of: SYVN1
location: complement(join(127456..129358,129544..129671,129807..129993,130071..130184,130277..130414,130710..130861,131050..131166,131540..131605,131683..131782,132528..132654,132767..132870,133500..133548,133630..133782,134263..134355,134799..134944,136909..137033))
location: region:127456-137033:-1
so has part: feature:136909-137033:-1:exon
so has part: feature:134799-134944:-1:exon
so has part: feature:134263-134355:-1:exon
so has part: feature:133630-133782:-1:exon
so has part: feature:133500-133548:-1:exon
so has part: feature:132767-132870:-1:exon
so has part: feature:132528-132654:-1:exon
so has part: feature:131683-131782:-1:exon
so has part: feature:131540-131605:-1:exon
so has part: feature:131050-131166:-1:exon
so has part: feature:130710-130861:-1:exon
so has part: feature:130277-130414:-1:exon
so has part: feature:130071-130184:-1:exon
so has part: feature:129807-129993:-1:exon
so has part: feature:129544-129671:-1:exon
so has part: feature:127456-129358:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136909-137033:-1:exon

position:136909:-1
position: 136909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134799-134944:-1:exon

position:134799:-1
position: 134799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134944:-1
position: 134944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:134263-134355:-1:exon

position:134263:-1
position: 134263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134355:-1
position: 134355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:133630-133782:-1:exon

position:133630:-1
position: 133630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133782:-1
position: 133782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:133500-133548:-1:exon

position:133500:-1
position: 133500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133548:-1
position: 133548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:132767-132870:-1:exon

position:132767:-1
position: 132767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132870:-1
position: 132870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:132528-132654:-1:exon

position:132528:-1
position: 132528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132654:-1
position: 132654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:131683-131782:-1:exon

position:131683:-1
position: 131683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131782:-1
position: 131782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:131540-131605:-1:exon

position:131540:-1
position: 131540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131605:-1
position: 131605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:131050-131166:-1:exon

position:131050:-1
position: 131050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131166:-1
position: 131166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:130710-130861:-1:exon

position:130710:-1
position: 130710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130861:-1
position: 130861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:130277-130414:-1:exon

position:130277:-1
position: 130277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130414:-1
position: 130414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:130071-130184:-1:exon

position:130071:-1
position: 130071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130184:-1
position: 130184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:129807-129993:-1:exon

position:129807:-1
position: 129807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129993:-1
position: 129993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:129544-129671:-1:exon

position:129544:-1
position: 129544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129671:-1
position: 129671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:127456-129358:-1:exon

position:129358:-1
position: 129358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYVN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: SYVN1
product: synoviolin 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054183956.1
SIO_010081: SYVN1
subclass of: SO_0000673
so part of: SYVN1
location: complement(join(127456..129358,129544..129671,129807..129993,130071..130184,130277..130414,130710..130861,131050..131166,131540..131605,131683..131782,132528..132654,132767..132870,133500..133548,133630..133782,134263..134355,134799..134944,136259..136308))
location: region:127456-136308:-1
so has part: feature:136259-136308:-1:exon
so has part: feature:134799-134944:-1:exon
so has part: feature:134263-134355:-1:exon
so has part: feature:133630-133782:-1:exon
so has part: feature:133500-133548:-1:exon
so has part: feature:132767-132870:-1:exon
so has part: feature:132528-132654:-1:exon
so has part: feature:131683-131782:-1:exon
so has part: feature:131540-131605:-1:exon
so has part: feature:131050-131166:-1:exon
so has part: feature:130710-130861:-1:exon
so has part: feature:130277-130414:-1:exon
so has part: feature:130071-130184:-1:exon
so has part: feature:129807-129993:-1:exon
so has part: feature:129544-129671:-1:exon
so has part: feature:127456-129358:-1:exon

position:136308:-1
position: 136308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136259-136308:-1:exon

position:136259:-1
position: 136259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134799-134944:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134263-134355:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133630-133782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:133500-133548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132767-132870:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:132528-132654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131683-131782:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:131540-131605:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:131050-131166:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:130710-130861:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130277-130414:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:130071-130184:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:129807-129993:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:129544-129671:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:127456-129358:-1:exon

SYVN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: SYVN1
product: synoviolin 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054183957.1
SIO_010081: SYVN1
subclass of: SO_0000673
so part of: SYVN1
location: complement(join(127456..129358,129544..129671,129807..129993,130071..130184,130277..130414,130710..130861,131050..131166,131540..131605,131683..131782,132528..132654,132767..132870,133500..133548,134263..134355,134799..134944))
location: region:127456-134944:-1
so has part: feature:134799-134944:-1:exon
so has part: feature:134263-134355:-1:exon
so has part: feature:133500-133548:-1:exon
so has part: feature:132767-132870:-1:exon
so has part: feature:132528-132654:-1:exon
so has part: feature:131683-131782:-1:exon
so has part: feature:131540-131605:-1:exon
so has part: feature:131050-131166:-1:exon
so has part: feature:130710-130861:-1:exon
so has part: feature:130277-130414:-1:exon
so has part: feature:130071-130184:-1:exon
so has part: feature:129807-129993:-1:exon
so has part: feature:129544-129671:-1:exon
so has part: feature:127456-129358:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134799-134944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134263-134355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133500-133548:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132767-132870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132528-132654:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131683-131782:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131540-131605:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131050-131166:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:130710-130861:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:130277-130414:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:130071-130184:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:129807-129993:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:129544-129671:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:127456-129358:-1:exon

SYVN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: SYVN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase synoviolin isoform X2
translation: MLCTAVVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKFMGKVFFGQLRAAEMEMERSPNISWLFHFRIVSLMFLLGILDFLFVNHAYHSILTRGASVQLVFGFEYAILMTMVLTIFIKYVLHSIDLQNENPWDSKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTFPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQTPPEPPEQAPQPPQTPQVPQPPNFPQGILPPFPPGMFPFWPPVGPFPPVPGVQPPNGTENTAPSSSAASASRPSDAANAGSEAAAAGTVPAFPFPPPWMGMPWPPLFGFPPMPVPPAGFAGLTEEELRAMEGHDRQNLEARLQCLQNIHTLLDAAMVQINQYLTVLATIGSPRPAAPRPPSAPAEEPTTLRSPGSPSAPATAGTAAGSTAATDPTAPVGAEGFTAEEEEEEDDGGEGSSSLDEPDTAELRRRRLQKLASPPPASH
SIO_010081: SYVN1
subclass of: SO_0000673
so part of: SYVN1
location: complement(join(129198..129358,129544..129671,129807..129993,130071..130184,130277..130414,130710..130861,131050..131166,131540..131605,131683..131782,132528..132654,132767..132870,133500..133548,134263..134355,134799..134930))
location: region:129198-134930:-1
so has part: feature:134799-134930:-1:exon
so has part: feature:134263-134355:-1:exon
so has part: feature:133500-133548:-1:exon
so has part: feature:132767-132870:-1:exon
so has part: feature:132528-132654:-1:exon
so has part: feature:131683-131782:-1:exon
so has part: feature:131540-131605:-1:exon
so has part: feature:131050-131166:-1:exon
so has part: feature:130710-130861:-1:exon
so has part: feature:130277-130414:-1:exon
so has part: feature:130071-130184:-1:exon
so has part: feature:129807-129993:-1:exon
so has part: feature:129544-129671:-1:exon
so has part: feature:129198-129358:-1:exon

XP_054039932.1
type: Protein
SIO_000068: ncbiprotein

position:129198:-1
position: 129198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134930:-1
position: 134930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134799-134930:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134263-134355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133500-133548:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132767-132870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132528-132654:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131683-131782:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131540-131605:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131050-131166:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:130710-130861:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:130277-130414:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:130071-130184:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:129807-129993:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:129544-129671:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:129198-129358:-1:exon

SYVN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: SYVN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase synoviolin isoform X1
translation: MLCTAVVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVNHAYHSILTRGASVQLVFGFEYAILMTMVLTIFIKYVLHSIDLQNENPWDSKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTFPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQTPPEPPEQAPQPPQTPQVPQPPNFPQGILPPFPPGMFPFWPPVGPFPPVPGVQPPNGTENTAPSSSAASASRPSDAANAGSEAAAAGTVPAFPFPPPWMGMPWPPLFGFPPMPVPPAGFAGLTEEELRAMEGHDRQNLEARLQCLQNIHTLLDAAMVQINQYLTVLATIGSPRPAAPRPPSAPAEEPTTLRSPGSPSAPATAGTAAGSTAATDPTAPVGAEGFTAEEEEEEDDGGEGSSSLDEPDTAELRRRRLQKLASPPPASH
SIO_010081: SYVN1
subclass of: SO_0000673
so part of: SYVN1
location: complement(join(129198..129358,129544..129671,129807..129993,130071..130184,130277..130414,130710..130861,131050..131166,131540..131605,131683..131782,132528..132654,132767..132870,133500..133548,133630..133782,134263..134355,134799..134930))
location: region:129198-134930:-1
so has part: feature:134799-134930:-1:exon
so has part: feature:134263-134355:-1:exon
so has part: feature:133630-133782:-1:exon
so has part: feature:133500-133548:-1:exon
so has part: feature:132767-132870:-1:exon
so has part: feature:132528-132654:-1:exon
so has part: feature:131683-131782:-1:exon
so has part: feature:131540-131605:-1:exon
so has part: feature:131050-131166:-1:exon
so has part: feature:130710-130861:-1:exon
so has part: feature:130277-130414:-1:exon
so has part: feature:130071-130184:-1:exon
so has part: feature:129807-129993:-1:exon
so has part: feature:129544-129671:-1:exon
so has part: feature:129198-129358:-1:exon

XP_054039930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134799-134930:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134263-134355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133630-133782:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133500-133548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132767-132870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132528-132654:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131683-131782:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131540-131605:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:131050-131166:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:130710-130861:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:130277-130414:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130071-130184:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:129807-129993:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:129544-129671:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:129198-129358:-1:exon

SYVN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: SYVN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase synoviolin isoform X1
translation: MLCTAVVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVNHAYHSILTRGASVQLVFGFEYAILMTMVLTIFIKYVLHSIDLQNENPWDSKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTFPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQTPPEPPEQAPQPPQTPQVPQPPNFPQGILPPFPPGMFPFWPPVGPFPPVPGVQPPNGTENTAPSSSAASASRPSDAANAGSEAAAAGTVPAFPFPPPWMGMPWPPLFGFPPMPVPPAGFAGLTEEELRAMEGHDRQNLEARLQCLQNIHTLLDAAMVQINQYLTVLATIGSPRPAAPRPPSAPAEEPTTLRSPGSPSAPATAGTAAGSTAATDPTAPVGAEGFTAEEEEEEDDGGEGSSSLDEPDTAELRRRRLQKLASPPPASH
SIO_010081: SYVN1
subclass of: SO_0000673
so part of: SYVN1
location: complement(join(129198..129358,129544..129671,129807..129993,130071..130184,130277..130414,130710..130861,131050..131166,131540..131605,131683..131782,132528..132654,132767..132870,133500..133548,133630..133782,134263..134355,134799..134930))
location: region:129198-134930:-1
so has part: feature:134799-134930:-1:exon
so has part: feature:134263-134355:-1:exon
so has part: feature:133630-133782:-1:exon
so has part: feature:133500-133548:-1:exon
so has part: feature:132767-132870:-1:exon
so has part: feature:132528-132654:-1:exon
so has part: feature:131683-131782:-1:exon
so has part: feature:131540-131605:-1:exon
so has part: feature:131050-131166:-1:exon
so has part: feature:130710-130861:-1:exon
so has part: feature:130277-130414:-1:exon
so has part: feature:130071-130184:-1:exon
so has part: feature:129807-129993:-1:exon
so has part: feature:129544-129671:-1:exon
so has part: feature:129198-129358:-1:exon

XP_054039931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134799-134930:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134263-134355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133630-133782:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133500-133548:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132767-132870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132528-132654:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131683-131782:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131540-131605:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:131050-131166:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:130710-130861:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:130277-130414:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130071-130184:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:129807-129993:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:129544-129671:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:129198-129358:-1:exon

SPDYC
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: SPDYC
note: speedy/RINGO cell cycle regulator family member C; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 137047..142542
location: region:137047-142542:1
so has part: feature:137047-142542:1:exon
subclass of: SO_0000010

128901806
type: Gene
SIO_000068: ncbigene

position:137047:1
position: 137047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142542:1
position: 142542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137047-142542:1:exon

SPDYC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: SPDYC
product: speedy/RINGO cell cycle regulator family member C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_054183959.1
SIO_010081: SPDYC
subclass of: SO_0000673
so part of: SPDYC
location: join(137047..137513,140571..140700,140839..140897,141015..141100,141298..141469,141914..142542)
location: region:137047-142542:1
so has part: feature:137047-137513:1:exon
so has part: feature:140571-140700:1:exon
so has part: feature:140839-140897:1:exon
so has part: feature:141015-141100:1:exon
so has part: feature:141298-141469:1:exon
so has part: feature:141914-142542:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137047-137513:1:exon

position:137513:1
position: 137513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:140571-140700:1:exon

position:140571:1
position: 140571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140700:1
position: 140700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:140839-140897:1:exon

position:140839:1
position: 140839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140897:1
position: 140897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:141015-141100:1:exon

position:141015:1
position: 141015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141100:1
position: 141100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:141298-141469:1:exon

position:141298:1
position: 141298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141469:1
position: 141469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:141914-142542:1:exon

position:141914:1
position: 141914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPDYC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: SPDYC
product: speedy/RINGO cell cycle regulator family member C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_054183961.1
SIO_010081: SPDYC
subclass of: SO_0000673
so part of: SPDYC
location: join(137047..137513,140571..140700,140842..140897,141015..141100,141298..141469,141914..142542)
location: region:137047-142542:1
so has part: feature:137047-137513:1:exon
so has part: feature:140571-140700:1:exon
so has part: feature:140842-140897:1:exon
so has part: feature:141015-141100:1:exon
so has part: feature:141298-141469:1:exon
so has part: feature:141914-142542:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137047-137513:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140571-140700:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140842-140897:1:exon

position:140842:1
position: 140842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:141015-141100:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141298-141469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141914-142542:1:exon

SPDYC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: SPDYC
product: speedy/RINGO cell cycle regulator family member C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_054183960.1
SIO_010081: SPDYC
subclass of: SO_0000673
so part of: SPDYC
location: join(137047..137450,140571..140700,140839..140897,141015..141100,141298..141469,141914..142542)
location: region:137047-142542:1
so has part: feature:137047-137450:1:exon
so has part: feature:140571-140700:1:exon
so has part: feature:140839-140897:1:exon
so has part: feature:141015-141100:1:exon
so has part: feature:141298-141469:1:exon
so has part: feature:141914-142542:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137047-137450:1:exon

position:137450:1
position: 137450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:140571-140700:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140839-140897:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141015-141100:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141298-141469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141914-142542:1:exon

SPDYC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: SPDYC
product: speedy/RINGO cell cycle regulator family member C, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_054183962.1
SIO_010081: SPDYC
subclass of: SO_0000673
so part of: SPDYC
location: join(137047..137450,140611..140700,140839..140897,141015..141100,141298..141469,141914..142542)
location: region:137047-142542:1
so has part: feature:137047-137450:1:exon
so has part: feature:140611-140700:1:exon
so has part: feature:140839-140897:1:exon
so has part: feature:141015-141100:1:exon
so has part: feature:141298-141469:1:exon
so has part: feature:141914-142542:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137047-137450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140611-140700:1:exon

position:140611:1
position: 140611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:140839-140897:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141015-141100:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141298-141469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141914-142542:1:exon

SPDYC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: SPDYC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: speedy protein C isoform X1
translation: MKPPPSPAPPGGERPPPSTPRSLRLHRQEREAFFNLLEDNVVQEFLSMDVCCRISDKYLLAMVLMYFKRAGLPTSEYTRLNLFTALYLANDMEEDEEEHKYQIFPWALGRRWRCLFPRFLRRRDRLWARMSYRAAVSRHCCEEVMAVEPWHWAWRRERPPHHSGATRPQCLPWPSPCLRCSRPPAPQQEEDEGPWAQDTIILLPPRRPSAALLPDSAKTH
SIO_010081: SPDYC
subclass of: SO_0000673
so part of: SPDYC
location: join(140589..140700,140839..140897,141015..141100,141298..141469,141914..142147)
location: region:140589-142147:1
so has part: feature:140589-140700:1:exon
so has part: feature:140839-140897:1:exon
so has part: feature:141015-141100:1:exon
so has part: feature:141298-141469:1:exon
so has part: feature:141914-142147:1:exon

XP_054039934.1
type: Protein
SIO_000068: ncbiprotein

position:140589:1
position: 140589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142147:1
position: 142147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140589-140700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140839-140897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141015-141100:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141298-141469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141914-142147:1:exon

SPDYC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: SPDYC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: speedy protein C isoform X1
translation: MKPPPSPAPPGGERPPPSTPRSLRLHRQEREAFFNLLEDNVVQEFLSMDVCCRISDKYLLAMVLMYFKRAGLPTSEYTRLNLFTALYLANDMEEDEEEHKYQIFPWALGRRWRCLFPRFLRRRDRLWARMSYRAAVSRHCCEEVMAVEPWHWAWRRERPPHHSGATRPQCLPWPSPCLRCSRPPAPQQEEDEGPWAQDTIILLPPRRPSAALLPDSAKTH
SIO_010081: SPDYC
subclass of: SO_0000673
so part of: SPDYC
location: join(140589..140700,140839..140897,141015..141100,141298..141469,141914..142147)
location: region:140589-142147:1
so has part: feature:140589-140700:1:exon
so has part: feature:140839-140897:1:exon
so has part: feature:141015-141100:1:exon
so has part: feature:141298-141469:1:exon
so has part: feature:141914-142147:1:exon

XP_054039935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140589-140700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140839-140897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141015-141100:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141298-141469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141914-142147:1:exon

SPDYC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: SPDYC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: speedy protein C isoform X2
translation: MKPPPSPAPPGGERPPPSTPRSLRLHRQEREAFFNLLDNVVQEFLSMDVCCRISDKYLLAMVLMYFKRAGLPTSEYTRLNLFTALYLANDMEEDEEEHKYQIFPWALGRRWRCLFPRFLRRRDRLWARMSYRAAVSRHCCEEVMAVEPWHWAWRRERPPHHSGATRPQCLPWPSPCLRCSRPPAPQQEEDEGPWAQDTIILLPPRRPSAALLPDSAKTH
SIO_010081: SPDYC
subclass of: SO_0000673
so part of: SPDYC
location: join(140589..140700,140842..140897,141015..141100,141298..141469,141914..142147)
location: region:140589-142147:1
so has part: feature:140589-140700:1:exon
so has part: feature:140842-140897:1:exon
so has part: feature:141015-141100:1:exon
so has part: feature:141298-141469:1:exon
so has part: feature:141914-142147:1:exon

XP_054039936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140589-140700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140842-140897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141015-141100:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141298-141469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141914-142147:1:exon

SPDYC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: SPDYC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: speedy protein C isoform X3
translation: MDVCCRISDKYLLAMVLMYFKRAGLPTSEYTRLNLFTALYLANDMEEDEEEHKYQIFPWALGRRWRCLFPRFLRRRDRLWARMSYRAAVSRHCCEEVMAVEPWHWAWRRERPPHHSGATRPQCLPWPSPCLRCSRPPAPQQEEDEGPWAQDTIILLPPRRPSAALLPDSAKTH
SIO_010081: SPDYC
subclass of: SO_0000673
so part of: SPDYC
location: join(140868..140897,141015..141100,141298..141469,141914..142147)
location: region:140868-142147:1
so has part: feature:140868-140897:1:exon
so has part: feature:141015-141100:1:exon
so has part: feature:141298-141469:1:exon
so has part: feature:141914-142147:1:exon

XP_054039937.1
type: Protein
SIO_000068: ncbiprotein

position:140868:1
position: 140868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140868-140897:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141015-141100:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141298-141469:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141914-142147:1:exon

CAPN1
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: CAPN1
note: calpain 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 143486..151269
location: region:143486-151269:1
so has part: feature:143486-151269:1:exon
subclass of: SO_0000010

128901826
type: Gene
SIO_000068: ncbigene

position:143486:1
position: 143486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151269:1
position: 151269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143486-151269:1:exon

CAPN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: CAPN1
product: calpain 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins
transcript id: XM_054183989.1
SIO_010081: CAPN1
subclass of: SO_0000673
so part of: CAPN1
location: join(143486..143646,144040..144171,145617..145884,146102..146171,146439..146557,146941..147074,147151..147319,147433..147516,147589..147674,147754..147828,147931..148091,148171..148349,148445..148456,148566..148777,148852..148891,148965..149030,149116..149173,149256..149320,149417..149485,149589..149667,149785..149901,150647..150705,150811..151269)
location: region:143486-151269:1
so has part: feature:143486-143646:1:exon
so has part: feature:144040-144171:1:exon
so has part: feature:145617-145884:1:exon
so has part: feature:146102-146171:1:exon
so has part: feature:146439-146557:1:exon
so has part: feature:146941-147074:1:exon
so has part: feature:147151-147319:1:exon
so has part: feature:147433-147516:1:exon
so has part: feature:147589-147674:1:exon
so has part: feature:147754-147828:1:exon
so has part: feature:147931-148091:1:exon
so has part: feature:148171-148349:1:exon
so has part: feature:148445-148456:1:exon
so has part: feature:148566-148777:1:exon
so has part: feature:148852-148891:1:exon
so has part: feature:148965-149030:1:exon
so has part: feature:149116-149173:1:exon
so has part: feature:149256-149320:1:exon
so has part: feature:149417-149485:1:exon
so has part: feature:149589-149667:1:exon
so has part: feature:149785-149901:1:exon
so has part: feature:150647-150705:1:exon
so has part: feature:150811-151269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:143486-143646:1:exon

position:143646:1
position: 143646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144040-144171:1:exon

position:144040:1
position: 144040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144171:1
position: 144171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:145617-145884:1:exon

position:145617:1
position: 145617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145884:1
position: 145884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:146102-146171:1:exon

position:146102:1
position: 146102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146171:1
position: 146171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:146439-146557:1:exon

position:146439:1
position: 146439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146557:1
position: 146557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:146941-147074:1:exon

position:146941:1
position: 146941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147074:1
position: 147074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:147151-147319:1:exon

position:147151:1
position: 147151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147319:1
position: 147319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:147433-147516:1:exon

position:147433:1
position: 147433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147516:1
position: 147516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:147589-147674:1:exon

position:147589:1
position: 147589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147674:1
position: 147674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:147754-147828:1:exon

position:147754:1
position: 147754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147828:1
position: 147828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:147931-148091:1:exon

position:147931:1
position: 147931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148091:1
position: 148091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:148171-148349:1:exon

position:148171:1
position: 148171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148349:1
position: 148349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:148445-148456:1:exon

position:148445:1
position: 148445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148456:1
position: 148456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:148566-148777:1:exon

position:148566:1
position: 148566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148777:1
position: 148777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:148852-148891:1:exon

position:148852:1
position: 148852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148891:1
position: 148891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:148965-149030:1:exon

position:148965:1
position: 148965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149030:1
position: 149030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:149116-149173:1:exon

position:149116:1
position: 149116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149173:1
position: 149173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:149256-149320:1:exon

position:149256:1
position: 149256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149320:1
position: 149320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:149417-149485:1:exon

position:149417:1
position: 149417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149485:1
position: 149485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:149589-149667:1:exon

position:149589:1
position: 149589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149667:1
position: 149667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:149785-149901:1:exon

position:149785:1
position: 149785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149901:1
position: 149901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:150647-150705:1:exon

position:150647:1
position: 150647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150705:1
position: 150705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:150811-151269:1:exon

position:150811:1
position: 150811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CAPN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: CAPN1
product: calpain 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_054183990.1
SIO_010081: CAPN1
subclass of: SO_0000673
so part of: CAPN1
location: join(143486..143646,144040..144171,145617..145884,146102..146171,146439..146557,146941..147074,147151..147319,147433..147516,147589..147674,147754..147828,147931..148091,148171..148349,148445..148456,148566..148777,148852..148891,148965..149030,149116..149173,149256..149320,149421..149485,149589..149667,149785..149901)
location: region:143486-149901:1
so has part: feature:143486-143646:1:exon
so has part: feature:144040-144171:1:exon
so has part: feature:145617-145884:1:exon
so has part: feature:146102-146171:1:exon
so has part: feature:146439-146557:1:exon
so has part: feature:146941-147074:1:exon
so has part: feature:147151-147319:1:exon
so has part: feature:147433-147516:1:exon
so has part: feature:147589-147674:1:exon
so has part: feature:147754-147828:1:exon
so has part: feature:147931-148091:1:exon
so has part: feature:148171-148349:1:exon
so has part: feature:148445-148456:1:exon
so has part: feature:148566-148777:1:exon
so has part: feature:148852-148891:1:exon
so has part: feature:148965-149030:1:exon
so has part: feature:149116-149173:1:exon
so has part: feature:149256-149320:1:exon
so has part: feature:149421-149485:1:exon
so has part: feature:149589-149667:1:exon
so has part: feature:149785-149901:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:143486-143646:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144040-144171:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145617-145884:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146102-146171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:146439-146557:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:146941-147074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:147151-147319:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:147433-147516:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147589-147674:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147754-147828:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:147931-148091:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:148171-148349:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:148445-148456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:148566-148777:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:148852-148891:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:148965-149030:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:149116-149173:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:149256-149320:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:149421-149485:1:exon

position:149421:1
position: 149421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:149589-149667:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:149785-149901:1:exon

CAPN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: CAPN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calpain-1 catalytic subunit isoform X1
translation: MAEEPIVPVYCTGVSAQVQRQRAKALGLGRHENAVRYLGQDFGRLVEECRRSGTLFRDQTFPPAPASLGFRELGPGTAKTHGVQWKRPTELCPRPQFIVDGATRTDICQGALGDCWLLAAIASLTLNETLLHRVVPHGQSFQHGYAGIFHFQIWQFGEWLDVVVDDYLPTKDGKLLFVHSAEGTEFWSALLEKAYAKVNGCYEALSGGSTSEGFEDFTGGVTEWYDLRKPPADLYQIILKALERGSLLGCSIDITSAFDMEAVTFKKLVKGHAYSVTGAKQINYRGQSLGLIRMRNPWGEVEWTGPWSDSSSEWNAVEPALRQQLMVKMEDGEFWMSFRDFLREFTRLEICNLTPDALQSRKFRKWNTRLYDGTWRRGSTAGGCRNYPATFWINPQFKIQLEEVDDEGDEGGGREPGCSFLLALMQKHRRRERRYGKDMETIGFAVYEVPPEHVGKSGVHLKRDFFLANASRARSEQFINLREVSTRFRLPPGEYIVVPSTFEPNKEGDFVLRVFSEKKAGTEEMDDKIQATLPDEKVLSESQIDDNFKQLFKQLAGADMEISVTELQTILNRIIGKHKDLRTKGFSTESCRSMVNLMDKDGNGKLGLVEFNILWNRIRNYLAIFRKFDLDKSGSMSAYEMRMALEAAGYKLNKKLHELIITRYAEPDLAIDFDNFVCCLVRLETMFRFFQAMDVDQDGVVTFDLLQWLQLTMFA
SIO_010081: CAPN1
subclass of: SO_0000673
so part of: CAPN1
location: join(145618..145884,146102..146171,146439..146557,146941..147074,147151..147319,147433..147516,147589..147674,147754..147828,147931..148091,148171..148349,148445..148456,148566..148777,148852..148891,148965..149030,149116..149173,149256..149320,149417..149485,149589..149667,149785..149901,150647..150705,150811..150837)
location: region:145618-150837:1
so has part: feature:145618-145884:1:exon
so has part: feature:146102-146171:1:exon
so has part: feature:146439-146557:1:exon
so has part: feature:146941-147074:1:exon
so has part: feature:147151-147319:1:exon
so has part: feature:147433-147516:1:exon
so has part: feature:147589-147674:1:exon
so has part: feature:147754-147828:1:exon
so has part: feature:147931-148091:1:exon
so has part: feature:148171-148349:1:exon
so has part: feature:148445-148456:1:exon
so has part: feature:148566-148777:1:exon
so has part: feature:148852-148891:1:exon
so has part: feature:148965-149030:1:exon
so has part: feature:149116-149173:1:exon
so has part: feature:149256-149320:1:exon
so has part: feature:149417-149485:1:exon
so has part: feature:149589-149667:1:exon
so has part: feature:149785-149901:1:exon
so has part: feature:150647-150705:1:exon
so has part: feature:150811-150837:1:exon

XP_054039964.1
type: Protein
SIO_000068: ncbiprotein

position:145618:1
position: 145618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150837:1
position: 150837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145618-145884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146102-146171:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146439-146557:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146941-147074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147151-147319:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147433-147516:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:147589-147674:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:147754-147828:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147931-148091:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148171-148349:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:148445-148456:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:148566-148777:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:148852-148891:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:148965-149030:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:149116-149173:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:149256-149320:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:149417-149485:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:149589-149667:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:149785-149901:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:150647-150705:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:150811-150837:1:exon

CAPN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: CAPN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calpain-1 catalytic subunit isoform X2
translation: MAEEPIVPVYCTGVSAQVQRQRAKALGLGRHENAVRYLGQDFGRLVEECRRSGTLFRDQTFPPAPASLGFRELGPGTAKTHGVQWKRPTELCPRPQFIVDGATRTDICQGALGDCWLLAAIASLTLNETLLHRVVPHGQSFQHGYAGIFHFQIWQFGEWLDVVVDDYLPTKDGKLLFVHSAEGTEFWSALLEKAYAKVNGCYEALSGGSTSEGFEDFTGGVTEWYDLRKPPADLYQIILKALERGSLLGCSIDITSAFDMEAVTFKKLVKGHAYSVTGAKQINYRGQSLGLIRMRNPWGEVEWTGPWSDSSSEWNAVEPALRQQLMVKMEDGEFWMSFRDFLREFTRLEICNLTPDALQSRKFRKWNTRLYDGTWRRGSTAGGCRNYPATFWINPQFKIQLEEVDDEGDEGGGREPGCSFLLALMQKHRRRERRYGKDMETIGFAVYEVPPEHVGKSGVHLKRDFFLANASRARSEQFINLREVSTRFRLPPGEYIVVPSTFEPNKEGDFVLRVFSEKKAGTEEMDDKIQATLPDEKVLSESQIDDNFKQLFKQLAGADMEISVTELQTILNRIIGKHKDLRTKGFSTESCRSMVNLMDMATGSWGWWSSTSCGTESETTWPSSASSTWISRGA
SIO_010081: CAPN1
subclass of: SO_0000673
so part of: CAPN1
location: join(145618..145884,146102..146171,146439..146557,146941..147074,147151..147319,147433..147516,147589..147674,147754..147828,147931..148091,148171..148349,148445..148456,148566..148777,148852..148891,148965..149030,149116..149173,149256..149320,149421..149485,149589..149631)
location: region:145618-149631:1
so has part: feature:145618-145884:1:exon
so has part: feature:146102-146171:1:exon
so has part: feature:146439-146557:1:exon
so has part: feature:146941-147074:1:exon
so has part: feature:147151-147319:1:exon
so has part: feature:147433-147516:1:exon
so has part: feature:147589-147674:1:exon
so has part: feature:147754-147828:1:exon
so has part: feature:147931-148091:1:exon
so has part: feature:148171-148349:1:exon
so has part: feature:148445-148456:1:exon
so has part: feature:148566-148777:1:exon
so has part: feature:148852-148891:1:exon
so has part: feature:148965-149030:1:exon
so has part: feature:149116-149173:1:exon
so has part: feature:149256-149320:1:exon
so has part: feature:149421-149485:1:exon
so has part: feature:149589-149631:1:exon

XP_054039965.1
type: Protein
SIO_000068: ncbiprotein

position:149631:1
position: 149631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145618-145884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146102-146171:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146439-146557:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146941-147074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147151-147319:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147433-147516:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:147589-147674:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:147754-147828:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147931-148091:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148171-148349:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:148445-148456:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:148566-148777:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:148852-148891:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:148965-149030:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:149116-149173:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:149256-149320:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:149421-149485:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:149589-149631:1:exon

POLA2
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: POLA2
note: DNA polymerase alpha 2, accessory subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 151417..161297
location: region:151417-161297:1
so has part: feature:151417-161297:1:exon
subclass of: SO_0000010

128901828
type: Gene
SIO_000068: ncbigene

position:151417:1
position: 151417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161297:1
position: 161297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151417-161297:1:exon

POLA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: POLA2
product: DNA polymerase alpha 2, accessory subunit, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054183995.1
SIO_010081: POLA2
subclass of: SO_0000673
so part of: POLA2
location: join(151417..152025,152489..152616,152706..152791,152985..153039,153158..153264,153359..153552,153658..153746,153847..154002,154100..154162,154264..154306,154438..154556,155081..155119,155420..155493,156435..156608,158156..158215,158585..158711,160340..161297)
location: region:151417-161297:1
so has part: feature:151417-152025:1:exon
so has part: feature:152489-152616:1:exon
so has part: feature:152706-152791:1:exon
so has part: feature:152985-153039:1:exon
so has part: feature:153158-153264:1:exon
so has part: feature:153359-153552:1:exon
so has part: feature:153658-153746:1:exon
so has part: feature:153847-154002:1:exon
so has part: feature:154100-154162:1:exon
so has part: feature:154264-154306:1:exon
so has part: feature:154438-154556:1:exon
so has part: feature:155081-155119:1:exon
so has part: feature:155420-155493:1:exon
so has part: feature:156435-156608:1:exon
so has part: feature:158156-158215:1:exon
so has part: feature:158585-158711:1:exon
so has part: feature:160340-161297:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151417-152025:1:exon

position:152025:1
position: 152025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:152489-152616:1:exon

position:152489:1
position: 152489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152616:1
position: 152616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:152706-152791:1:exon

position:152706:1
position: 152706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152791:1
position: 152791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:152985-153039:1:exon

position:152985:1
position: 152985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153039:1
position: 153039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:153158-153264:1:exon

position:153158:1
position: 153158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153264:1
position: 153264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:153359-153552:1:exon

position:153359:1
position: 153359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153552:1
position: 153552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:153658-153746:1:exon

position:153658:1
position: 153658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153746:1
position: 153746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:153847-154002:1:exon

position:153847:1
position: 153847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154002:1
position: 154002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:154100-154162:1:exon

position:154100:1
position: 154100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154162:1
position: 154162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:154264-154306:1:exon

position:154264:1
position: 154264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154306:1
position: 154306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:154438-154556:1:exon

position:154438:1
position: 154438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154556:1
position: 154556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:155081-155119:1:exon

position:155081:1
position: 155081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155119:1
position: 155119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:155420-155493:1:exon

position:155420:1
position: 155420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155493:1
position: 155493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:156435-156608:1:exon

position:156435:1
position: 156435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156608:1
position: 156608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:158156-158215:1:exon

position:158156:1
position: 158156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158215:1
position: 158215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:158585-158711:1:exon

position:158585:1
position: 158585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158711:1
position: 158711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:160340-161297:1:exon

position:160340:1
position: 160340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POLA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: POLA2
product: DNA polymerase alpha 2, accessory subunit, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054183996.1
SIO_010081: POLA2
subclass of: SO_0000673
so part of: POLA2
location: join(151417..152025,152489..152616,152706..152791,152985..153039,153158..153264,153359..153552,153658..153746,153847..154002,154100..154162,154264..154306,154438..154556,155081..155119,155420..155493,156438..156608,158156..158215,158585..158711,160340..161297)
location: region:151417-161297:1
so has part: feature:151417-152025:1:exon
so has part: feature:152489-152616:1:exon
so has part: feature:152706-152791:1:exon
so has part: feature:152985-153039:1:exon
so has part: feature:153158-153264:1:exon
so has part: feature:153359-153552:1:exon
so has part: feature:153658-153746:1:exon
so has part: feature:153847-154002:1:exon
so has part: feature:154100-154162:1:exon
so has part: feature:154264-154306:1:exon
so has part: feature:154438-154556:1:exon
so has part: feature:155081-155119:1:exon
so has part: feature:155420-155493:1:exon
so has part: feature:156438-156608:1:exon
so has part: feature:158156-158215:1:exon
so has part: feature:158585-158711:1:exon
so has part: feature:160340-161297:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151417-152025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152489-152616:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152706-152791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152985-153039:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153158-153264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:153359-153552:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153658-153746:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153847-154002:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:154100-154162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154264-154306:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154438-154556:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:155081-155119:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:155420-155493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:156438-156608:1:exon

position:156438:1
position: 156438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:158156-158215:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:158585-158711:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:160340-161297:1:exon

POLA2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 75485
gene: POLA2
product: DNA polymerase alpha 2, accessory subunit, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XR_008463532.1
SIO_010081: POLA2
so part of: POLA2
location: join(151417..152025,152489..152616,152706..152791,152985..153039,153158..153264,153359..153552,153658..153746,153847..154002,154100..154162,154264..154306,154438..154556,155081..155119,155420..155493,156435..156608,157710..157816,158156..158215,158585..158660)
location: region:151417-158660:1
so has part: feature:151417-152025:1:exon
so has part: feature:152489-152616:1:exon
so has part: feature:152706-152791:1:exon
so has part: feature:152985-153039:1:exon
so has part: feature:153158-153264:1:exon
so has part: feature:153359-153552:1:exon
so has part: feature:153658-153746:1:exon
so has part: feature:153847-154002:1:exon
so has part: feature:154100-154162:1:exon
so has part: feature:154264-154306:1:exon
so has part: feature:154438-154556:1:exon
so has part: feature:155081-155119:1:exon
so has part: feature:155420-155493:1:exon
so has part: feature:156435-156608:1:exon
so has part: feature:157710-157816:1:exon
so has part: feature:158156-158215:1:exon
so has part: feature:158585-158660:1:exon

position:158660:1
position: 158660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151417-152025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152489-152616:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152706-152791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152985-153039:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153158-153264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:153359-153552:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153658-153746:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153847-154002:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:154100-154162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154264-154306:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154438-154556:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:155081-155119:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:155420-155493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:156435-156608:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:157710-157816:1:exon

position:157710:1
position: 157710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157816:1
position: 157816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:158156-158215:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:158585-158660:1:exon

POLA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: POLA2
product: DNA polymerase alpha 2, accessory subunit, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_054183997.1
SIO_010081: POLA2
subclass of: SO_0000673
so part of: POLA2
location: join(151418..152025,152489..152616,152706..152791,152985..153039,153158..153264,153359..153552,153658..153746,153847..154002,154100..154162,154264..154306,154438..154556,155081..155119,155420..155493,156500..156608,158156..158215,158585..158711,160340..160475)
location: region:151418-160475:1
so has part: feature:151418-152025:1:exon
so has part: feature:152489-152616:1:exon
so has part: feature:152706-152791:1:exon
so has part: feature:152985-153039:1:exon
so has part: feature:153158-153264:1:exon
so has part: feature:153359-153552:1:exon
so has part: feature:153658-153746:1:exon
so has part: feature:153847-154002:1:exon
so has part: feature:154100-154162:1:exon
so has part: feature:154264-154306:1:exon
so has part: feature:154438-154556:1:exon
so has part: feature:155081-155119:1:exon
so has part: feature:155420-155493:1:exon
so has part: feature:156500-156608:1:exon
so has part: feature:158156-158215:1:exon
so has part: feature:158585-158711:1:exon
so has part: feature:160340-160475:1:exon

position:151418:1
position: 151418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160475:1
position: 160475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151418-152025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152489-152616:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152706-152791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152985-153039:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153158-153264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:153359-153552:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153658-153746:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153847-154002:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:154100-154162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154264-154306:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154438-154556:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:155081-155119:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:155420-155493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:156500-156608:1:exon

position:156500:1
position: 156500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:158156-158215:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:158585-158711:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:160340-160475:1:exon

POLA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: POLA2
product: DNA polymerase alpha 2, accessory subunit, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054183993.1
SIO_010081: POLA2
subclass of: SO_0000673
so part of: POLA2
location: join(151419..152025,152489..152616,152706..152791,152985..153039,153158..153264,153359..153552,153658..153746,153847..154002,154100..154162,154264..154306,154438..154556,155081..155119,155420..155493,156500..156608,157710..157816,158156..158215,158585..158711,160340..161297)
location: region:151419-161297:1
so has part: feature:151419-152025:1:exon
so has part: feature:152489-152616:1:exon
so has part: feature:152706-152791:1:exon
so has part: feature:152985-153039:1:exon
so has part: feature:153158-153264:1:exon
so has part: feature:153359-153552:1:exon
so has part: feature:153658-153746:1:exon
so has part: feature:153847-154002:1:exon
so has part: feature:154100-154162:1:exon
so has part: feature:154264-154306:1:exon
so has part: feature:154438-154556:1:exon
so has part: feature:155081-155119:1:exon
so has part: feature:155420-155493:1:exon
so has part: feature:156500-156608:1:exon
so has part: feature:157710-157816:1:exon
so has part: feature:158156-158215:1:exon
so has part: feature:158585-158711:1:exon
so has part: feature:160340-161297:1:exon

position:151419:1
position: 151419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151419-152025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152489-152616:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152706-152791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152985-153039:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153158-153264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:153359-153552:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153658-153746:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153847-154002:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:154100-154162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154264-154306:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154438-154556:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:155081-155119:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:155420-155493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:156500-156608:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:157710-157816:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:158156-158215:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:158585-158711:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:160340-161297:1:exon

POLA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: POLA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase alpha subunit B isoform X2
translation: MRGHASCLIRRAPAHSPSPLPSSAAVSRPRGLFAAAMAEPEQGPVSAEAVLRELALFELGCQGQDVPAKLVELCLTHGLGPVALANELLAFVTSKDLGTQLSADVLDAFEHELLAKRSSRVPRKRDNRYSGFHDIYSLQELLDEEEEDELLDAYTTPSKGSQKRSNSTPETPRPKRTLSSRSPYALFSPNSFSPSVTPSQKYTSRSSRGEVVASFGSVQGPSWSGRGGAGCTPKLFGVPEENLTKSYKFMFQKALDVREVLSWRIEELGDALKNHHHLEEFTSVLLPAQEPVTVLGQIGCDSNGKLNAKSVVLEGDREHSSGGQIPLDLSELKEYSLFPGQIVALEGTNSTGRMMVVSKLYEGVPLPFHTPTEPAPEQRMVLVACGPYTTSDSIAFDPLTDLIEVIVRDRPDVCVLFGPFLDAKHEQVENCQLLGSFAEVFKLCLKMIIEGTRSSVDSRLIFVPQLPVFPFFLPPAPAPSSSSCPRCGTCTTTTSTRSRRSSSPSCPRTTDRSSGISDRFTRILKHVLTQRSYYPLYPPSEELNVDYESFYSYASLPVTPDVLVTPSELRYFVKDVLGCVCINPGRLTKGQVGGTYGRLYLQREDAQGERKSPCVAAQVVKI
SIO_010081: POLA2
subclass of: SO_0000673
so part of: POLA2
location: join(151818..152025,152489..152616,152706..152791,152985..153039,153158..153264,153359..153552,153658..153746,153847..154002,154100..154162,154264..154306,154438..154556,155081..155119,155420..155493,156435..156608,158156..158215,158585..158711,160340..160486)
location: region:151818-160486:1
so has part: feature:151818-152025:1:exon
so has part: feature:152489-152616:1:exon
so has part: feature:152706-152791:1:exon
so has part: feature:152985-153039:1:exon
so has part: feature:153158-153264:1:exon
so has part: feature:153359-153552:1:exon
so has part: feature:153658-153746:1:exon
so has part: feature:153847-154002:1:exon
so has part: feature:154100-154162:1:exon
so has part: feature:154264-154306:1:exon
so has part: feature:154438-154556:1:exon
so has part: feature:155081-155119:1:exon
so has part: feature:155420-155493:1:exon
so has part: feature:156435-156608:1:exon
so has part: feature:158156-158215:1:exon
so has part: feature:158585-158711:1:exon
so has part: feature:160340-160486:1:exon

XP_054039970.1
type: Protein
SIO_000068: ncbiprotein

position:151818:1
position: 151818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160486:1
position: 160486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151818-152025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152489-152616:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152706-152791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152985-153039:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153158-153264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:153359-153552:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153658-153746:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153847-154002:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:154100-154162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154264-154306:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154438-154556:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:155081-155119:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:155420-155493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:156435-156608:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:158156-158215:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:158585-158711:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:160340-160486:1:exon

POLA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: POLA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase alpha subunit B isoform X3
translation: MRGHASCLIRRAPAHSPSPLPSSAAVSRPRGLFAAAMAEPEQGPVSAEAVLRELALFELGCQGQDVPAKLVELCLTHGLGPVALANELLAFVTSKDLGTQLSADVLDAFEHELLAKRSSRVPRKRDNRYSGFHDIYSLQELLDEEEEDELLDAYTTPSKGSQKRSNSTPETPRPKRTLSSRSPYALFSPNSFSPSVTPSQKYTSRSSRGEVVASFGSVQGPSWSGRGGAGCTPKLFGVPEENLTKSYKFMFQKALDVREVLSWRIEELGDALKNHHHLEEFTSVLLPAQEPVTVLGQIGCDSNGKLNAKSVVLEGDREHSSGGQIPLDLSELKEYSLFPGQIVALEGTNSTGRMMVVSKLYEGVPLPFHTPTEPAPEQRMVLVACGPYTTSDSIAFDPLTDLIEVIVRDRPDVCVLFGPFLDAKHEQVENCQLLGSFAEVFKLCLKMIIEGTRSVDSRLIFVPQLPVFPFFLPPAPAPSSSSCPRCGTCTTTTSTRSRRSSSPSCPRTTDRSSGISDRFTRILKHVLTQRSYYPLYPPSEELNVDYESFYSYASLPVTPDVLVTPSELRYFVKDVLGCVCINPGRLTKGQVGGTYGRLYLQREDAQGERKSPCVAAQVVKI
SIO_010081: POLA2
subclass of: SO_0000673
so part of: POLA2
location: join(151818..152025,152489..152616,152706..152791,152985..153039,153158..153264,153359..153552,153658..153746,153847..154002,154100..154162,154264..154306,154438..154556,155081..155119,155420..155493,156438..156608,158156..158215,158585..158711,160340..160486)
location: region:151818-160486:1
so has part: feature:151818-152025:1:exon
so has part: feature:152489-152616:1:exon
so has part: feature:152706-152791:1:exon
so has part: feature:152985-153039:1:exon
so has part: feature:153158-153264:1:exon
so has part: feature:153359-153552:1:exon
so has part: feature:153658-153746:1:exon
so has part: feature:153847-154002:1:exon
so has part: feature:154100-154162:1:exon
so has part: feature:154264-154306:1:exon
so has part: feature:154438-154556:1:exon
so has part: feature:155081-155119:1:exon
so has part: feature:155420-155493:1:exon
so has part: feature:156438-156608:1:exon
so has part: feature:158156-158215:1:exon
so has part: feature:158585-158711:1:exon
so has part: feature:160340-160486:1:exon

XP_054039971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151818-152025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152489-152616:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152706-152791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152985-153039:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153158-153264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:153359-153552:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153658-153746:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153847-154002:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:154100-154162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154264-154306:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154438-154556:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:155081-155119:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:155420-155493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:156438-156608:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:158156-158215:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:158585-158711:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:160340-160486:1:exon

POLA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: POLA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase alpha subunit B isoform X1
translation: MRGHASCLIRRAPAHSPSPLPSSAAVSRPRGLFAAAMAEPEQGPVSAEAVLRELALFELGCQGQDVPAKLVELCLTHGLGPVALANELLAFVTSKDLGTQLSADVLDAFEHELLAKRSSRVPRKRDNRYSGFHDIYSLQELLDEEEEDELLDAYTTPSKGSQKRSNSTPETPRPKRTLSSRSPYALFSPNSFSPSVTPSQKYTSRSSRGEVVASFGSVQGPSWSGRGGAGCTPKLFGVPEENLTKSYKFMFQKALDVREVLSWRIEELGDALKNHHHLEEFTSVLLPAQEPVTVLGQIGCDSNGKLNAKSVVLEGDREHSSGGQIPLDLSELKEYSLFPGQIVALEGTNSTGRMMVVSKLYEGVPLPFHTPTEPAPEQRMVLVACGPYTTSDSIAFDPLTDLIEVIVRDRPDVCVLFGPFLDAKHEQVENCQLLGSFAEVFKLCLKMIIEGTRSAGSQLVFVPSLRDVHHDYVYPQPPFLFPELPKDDRPRVHFVSEPCTLDVDGVVLGLTSTDLIFHMSVEEISSSSGISDRFTRILKHVLTQRSYYPLYPPSEELNVDYESFYSYASLPVTPDVLVTPSELRYFVKDVLGCVCINPGRLTKGQVGGTYGRLYLQREDAQGERKSPCVAAQVVKI
SIO_010081: POLA2
subclass of: SO_0000673
so part of: POLA2
location: join(151818..152025,152489..152616,152706..152791,152985..153039,153158..153264,153359..153552,153658..153746,153847..154002,154100..154162,154264..154306,154438..154556,155081..155119,155420..155493,156500..156608,157710..157816,158156..158215,158585..158711,160340..160486)
location: region:151818-160486:1
so has part: feature:151818-152025:1:exon
so has part: feature:152489-152616:1:exon
so has part: feature:152706-152791:1:exon
so has part: feature:152985-153039:1:exon
so has part: feature:153158-153264:1:exon
so has part: feature:153359-153552:1:exon
so has part: feature:153658-153746:1:exon
so has part: feature:153847-154002:1:exon
so has part: feature:154100-154162:1:exon
so has part: feature:154264-154306:1:exon
so has part: feature:154438-154556:1:exon
so has part: feature:155081-155119:1:exon
so has part: feature:155420-155493:1:exon
so has part: feature:156500-156608:1:exon
so has part: feature:157710-157816:1:exon
so has part: feature:158156-158215:1:exon
so has part: feature:158585-158711:1:exon
so has part: feature:160340-160486:1:exon

XP_054039968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151818-152025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152489-152616:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152706-152791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152985-153039:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153158-153264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:153359-153552:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153658-153746:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153847-154002:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:154100-154162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154264-154306:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154438-154556:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:155081-155119:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:155420-155493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:156500-156608:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:157710-157816:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:158156-158215:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:158585-158711:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:160340-160486:1:exon

POLA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: POLA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase alpha subunit B isoform X4
translation: MRGHASCLIRRAPAHSPSPLPSSAAVSRPRGLFAAAMAEPEQGPVSAEAVLRELALFELGCQGQDVPAKLVELCLTHGLGPVALANELLAFVTSKDLGTQLSADVLDAFEHELLAKRSSRVPRKRDNRYSGFHDIYSLQELLDEEEEDELLDAYTTPSKGSQKRSNSTPETPRPKRTLSSRSPYALFSPNSFSPSVTPSQKYTSRSSRGEVVASFGSVQGPSWSGRGGAGCTPKLFGVPEENLTKSYKFMFQKALDVREVLSWRIEELGDALKNHHHLEEFTSVLLPAQEPVTVLGQIGCDSNGKLNAKSVVLEGDREHSSGGQIPLDLSELKEYSLFPGQIVALEGTNSTGRMMVVSKLYEGVPLPFHTPTEPAPEQRMVLVACGPYTTSDSIAFDPLTDLIEVIVRDRPDVCVLFGPFLDAKHEQVENCQLLGSFAEVFKLCLKMIIEGTRSAGSQLVFVPSLRDVHHDYVYPQPPFLFPELPKDDRPLIWDLGQVHTNPQARPDAEELLPAVPPLGGAECRLRELLQLRLVTRHPGRPRHPLRAAVLR
SIO_010081: POLA2
subclass of: SO_0000673
so part of: POLA2
location: join(151818..152025,152489..152616,152706..152791,152985..153039,153158..153264,153359..153552,153658..153746,153847..154002,154100..154162,154264..154306,154438..154556,155081..155119,155420..155493,156500..156608,158156..158215,158585..158710)
location: region:151818-158710:1
so has part: feature:151818-152025:1:exon
so has part: feature:152489-152616:1:exon
so has part: feature:152706-152791:1:exon
so has part: feature:152985-153039:1:exon
so has part: feature:153158-153264:1:exon
so has part: feature:153359-153552:1:exon
so has part: feature:153658-153746:1:exon
so has part: feature:153847-154002:1:exon
so has part: feature:154100-154162:1:exon
so has part: feature:154264-154306:1:exon
so has part: feature:154438-154556:1:exon
so has part: feature:155081-155119:1:exon
so has part: feature:155420-155493:1:exon
so has part: feature:156500-156608:1:exon
so has part: feature:158156-158215:1:exon
so has part: feature:158585-158710:1:exon

XP_054039972.1
type: Protein
SIO_000068: ncbiprotein

position:158710:1
position: 158710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151818-152025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152489-152616:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152706-152791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152985-153039:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:153158-153264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:153359-153552:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153658-153746:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153847-154002:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:154100-154162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154264-154306:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154438-154556:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:155081-155119:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:155420-155493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:156500-156608:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:158156-158215:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:158585-158710:1:exon

CDC42EP2
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: CDC42EP2
note: CDC42 effector protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 162310..172074
location: region:162310-172074:1
so has part: feature:162310-172074:1:exon
subclass of: SO_0000010

128901832
type: Gene
SIO_000068: ncbigene

position:162310:1
position: 162310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172074:1
position: 172074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162310-172074:1:exon

CDC42EP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: CDC42EP2
product: CDC42 effector protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
transcript id: XM_054184007.1
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: join(162310..162393,167996..168802,168950..172074)
location: region:162310-172074:1
so has part: feature:162310-162393:1:exon
so has part: feature:167996-168802:1:exon
so has part: feature:168950-172074:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162310-162393:1:exon

position:162393:1
position: 162393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:167996-168802:1:exon

position:167996:1
position: 167996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168802:1
position: 168802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:168950-172074:1:exon

position:168950:1
position: 168950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDC42EP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: CDC42EP2
product: CDC42 effector protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
transcript id: XM_054184006.1
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: join(162359..162393,163441..166374,167996..168802,168950..172074)
location: region:162359-172074:1
so has part: feature:162359-162393:1:exon
so has part: feature:163441-166374:1:exon
so has part: feature:167996-168802:1:exon
so has part: feature:168950-172074:1:exon

position:162359:1
position: 162359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162359-162393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:163441-166374:1:exon

position:163441:1
position: 163441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166374:1
position: 166374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:167996-168802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168950-172074:1:exon

CDC42EP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: CDC42EP2
product: CDC42 effector protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
transcript id: XM_054184008.1
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: join(162359..162393,163441..163782,167996..168802,168950..172074)
location: region:162359-172074:1
so has part: feature:162359-162393:1:exon
so has part: feature:163441-163782:1:exon
so has part: feature:167996-168802:1:exon
so has part: feature:168950-172074:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162359-162393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:163441-163782:1:exon

position:163782:1
position: 163782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:167996-168802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168950-172074:1:exon

CDC42EP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: CDC42EP2
product: CDC42 effector protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
transcript id: XM_054184009.1
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: join(162413..162652,167996..168802,168950..172074)
location: region:162413-172074:1
so has part: feature:162413-162652:1:exon
so has part: feature:167996-168802:1:exon
so has part: feature:168950-172074:1:exon

position:162413:1
position: 162413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162413-162652:1:exon

position:162652:1
position: 162652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:167996-168802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168950-172074:1:exon

CDC42EP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: CDC42EP2
product: CDC42 effector protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
transcript id: XM_054184010.1
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: join(166426..166504,167996..168802,168950..172074)
location: region:166426-172074:1
so has part: feature:166426-166504:1:exon
so has part: feature:167996-168802:1:exon
so has part: feature:168950-172074:1:exon

position:166426:1
position: 166426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166426-166504:1:exon

position:166504:1
position: 166504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:167996-168802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168950-172074:1:exon

CDC42EP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: CDC42EP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cdc42 effector protein 2
translation: MSTKVPIYLKRGSRKGKKEKLRDILSSDMISPPLGDFRHTIHIGSGGESDMFGDISFLQGKFHLLPRTEGSLDSDKDSPDAAPFEFSRTATISGRQQPSSETSSPLLKNAISLPVIGGPQALTLPSAQAPPKPPRLHLDDKAPPAQSRGEDGEGRSVACPPPRPCASPFAAPTNGFTEEKGDAEPPFLSHAGSLLSLHVDLGPSILEDVLQVMEKHQAERVGGSIQDSGRQEILT
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: 168083..168790
location: region:168083-168790:1
so has part: feature:168083-168790:1:exon

XP_054039981.1
type: Protein
SIO_000068: ncbiprotein

position:168083:1
position: 168083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168790:1
position: 168790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168083-168790:1:exon

CDC42EP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: CDC42EP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cdc42 effector protein 2
translation: MSTKVPIYLKRGSRKGKKEKLRDILSSDMISPPLGDFRHTIHIGSGGESDMFGDISFLQGKFHLLPRTEGSLDSDKDSPDAAPFEFSRTATISGRQQPSSETSSPLLKNAISLPVIGGPQALTLPSAQAPPKPPRLHLDDKAPPAQSRGEDGEGRSVACPPPRPCASPFAAPTNGFTEEKGDAEPPFLSHAGSLLSLHVDLGPSILEDVLQVMEKHQAERVGGSIQDSGRQEILT
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: 168083..168790
location: region:168083-168790:1
so has part: feature:168083-168790:1:exon

XP_054039982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168083-168790:1:exon

CDC42EP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: CDC42EP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cdc42 effector protein 2
translation: MSTKVPIYLKRGSRKGKKEKLRDILSSDMISPPLGDFRHTIHIGSGGESDMFGDISFLQGKFHLLPRTEGSLDSDKDSPDAAPFEFSRTATISGRQQPSSETSSPLLKNAISLPVIGGPQALTLPSAQAPPKPPRLHLDDKAPPAQSRGEDGEGRSVACPPPRPCASPFAAPTNGFTEEKGDAEPPFLSHAGSLLSLHVDLGPSILEDVLQVMEKHQAERVGGSIQDSGRQEILT
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: 168083..168790
location: region:168083-168790:1
so has part: feature:168083-168790:1:exon

XP_054039983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168083-168790:1:exon

CDC42EP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: CDC42EP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cdc42 effector protein 2
translation: MSTKVPIYLKRGSRKGKKEKLRDILSSDMISPPLGDFRHTIHIGSGGESDMFGDISFLQGKFHLLPRTEGSLDSDKDSPDAAPFEFSRTATISGRQQPSSETSSPLLKNAISLPVIGGPQALTLPSAQAPPKPPRLHLDDKAPPAQSRGEDGEGRSVACPPPRPCASPFAAPTNGFTEEKGDAEPPFLSHAGSLLSLHVDLGPSILEDVLQVMEKHQAERVGGSIQDSGRQEILT
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: 168083..168790
location: region:168083-168790:1
so has part: feature:168083-168790:1:exon

XP_054039984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168083-168790:1:exon

CDC42EP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: CDC42EP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cdc42 effector protein 2
translation: MSTKVPIYLKRGSRKGKKEKLRDILSSDMISPPLGDFRHTIHIGSGGESDMFGDISFLQGKFHLLPRTEGSLDSDKDSPDAAPFEFSRTATISGRQQPSSETSSPLLKNAISLPVIGGPQALTLPSAQAPPKPPRLHLDDKAPPAQSRGEDGEGRSVACPPPRPCASPFAAPTNGFTEEKGDAEPPFLSHAGSLLSLHVDLGPSILEDVLQVMEKHQAERVGGSIQDSGRQEILT
SIO_010081: CDC42EP2
subclass of: SO_0000673
so part of: CDC42EP2
location: 168083..168790
location: region:168083-168790:1
so has part: feature:168083-168790:1:exon

XP_054039985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168083-168790:1:exon

DPF2
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: DPF2
note: double PHD fingers 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 172940..191666
location: region:172940-191666:1
so has part: feature:172940-191666:1:exon
subclass of: SO_0000010

128901831
type: Gene
SIO_000068: ncbigene

position:172940:1
position: 172940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191666:1
position: 191666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172940-191666:1:exon

DPF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: DPF2
product: double PHD fingers 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_054184004.1
SIO_010081: DPF2
subclass of: SO_0000673
so part of: DPF2
location: join(172940..173007,176942..177102,177190..177297,177534..177697,179892..179984,180291..180369,181251..181292,183492..183629,183891..184019,184206..184318,186298..186379,187019..189095,191583..191666)
location: region:172940-191666:1
so has part: feature:172940-173007:1:exon
so has part: feature:176942-177102:1:exon
so has part: feature:177190-177297:1:exon
so has part: feature:177534-177697:1:exon
so has part: feature:179892-179984:1:exon
so has part: feature:180291-180369:1:exon
so has part: feature:181251-181292:1:exon
so has part: feature:183492-183629:1:exon
so has part: feature:183891-184019:1:exon
so has part: feature:184206-184318:1:exon
so has part: feature:186298-186379:1:exon
so has part: feature:187019-189095:1:exon
so has part: feature:191583-191666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172940-173007:1:exon

position:173007:1
position: 173007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:176942-177102:1:exon

position:176942:1
position: 176942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177102:1
position: 177102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:177190-177297:1:exon

position:177190:1
position: 177190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177297:1
position: 177297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:177534-177697:1:exon

position:177534:1
position: 177534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177697:1
position: 177697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:179892-179984:1:exon

position:179892:1
position: 179892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179984:1
position: 179984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:180291-180369:1:exon

position:180291:1
position: 180291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180369:1
position: 180369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:181251-181292:1:exon

position:181251:1
position: 181251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181292:1
position: 181292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:183492-183629:1:exon

position:183492:1
position: 183492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183629:1
position: 183629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:183891-184019:1:exon

position:183891:1
position: 183891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184019:1
position: 184019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:184206-184318:1:exon

position:184206:1
position: 184206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184318:1
position: 184318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:186298-186379:1:exon

position:186298:1
position: 186298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186379:1
position: 186379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:187019-189095:1:exon

position:187019:1
position: 187019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189095:1
position: 189095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:191583-191666:1:exon

position:191583:1
position: 191583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DPF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: DPF2
product: double PHD fingers 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
transcript id: XM_054184005.1
SIO_010081: DPF2
subclass of: SO_0000673
so part of: DPF2
location: join(172940..173007,176942..177102,177190..177297,177534..177697,179892..179984,180291..180369,183492..183629,183891..184019,184206..184318,186298..186379,187019..189095,191583..191666)
location: region:172940-191666:1
so has part: feature:172940-173007:1:exon
so has part: feature:176942-177102:1:exon
so has part: feature:177190-177297:1:exon
so has part: feature:177534-177697:1:exon
so has part: feature:179892-179984:1:exon
so has part: feature:180291-180369:1:exon
so has part: feature:183492-183629:1:exon
so has part: feature:183891-184019:1:exon
so has part: feature:184206-184318:1:exon
so has part: feature:186298-186379:1:exon
so has part: feature:187019-189095:1:exon
so has part: feature:191583-191666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172940-173007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176942-177102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:177190-177297:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177534-177697:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179892-179984:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:180291-180369:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:183492-183629:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:183891-184019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184206-184318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:186298-186379:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:187019-189095:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:191583-191666:1:exon

DPF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: DPF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ubi-d4 isoform X1
translation: MAAVVQNVVKLLGEQYYRDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKRHRGPGLAAGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLEALLRTDPLEKRALPDPRIDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRRGKGKAKGKGVGGARKKLDAAILEDRDKPYACDNSYKQKHTLKPPDRVCGKRYKNRPGLSYHYAHSHLAEEEGDDKDDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPPMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
SIO_010081: DPF2
subclass of: SO_0000673
so part of: DPF2
location: join(172976..173007,176942..177102,177190..177297,177534..177697,179892..179984,180291..180369,181251..181292,183492..183629,183891..184019,184206..184318,186298..186379,187019..187095)
location: region:172976-187095:1
so has part: feature:172976-173007:1:exon
so has part: feature:176942-177102:1:exon
so has part: feature:177190-177297:1:exon
so has part: feature:177534-177697:1:exon
so has part: feature:179892-179984:1:exon
so has part: feature:180291-180369:1:exon
so has part: feature:181251-181292:1:exon
so has part: feature:183492-183629:1:exon
so has part: feature:183891-184019:1:exon
so has part: feature:184206-184318:1:exon
so has part: feature:186298-186379:1:exon
so has part: feature:187019-187095:1:exon

XP_054039979.1
type: Protein
SIO_000068: ncbiprotein

position:172976:1
position: 172976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187095:1
position: 187095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172976-173007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176942-177102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:177190-177297:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177534-177697:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179892-179984:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:180291-180369:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:181251-181292:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:183492-183629:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:183891-184019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:184206-184318:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:186298-186379:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:187019-187095:1:exon

DPF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: DPF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ubi-d4 isoform X2
translation: MAAVVQNVVKLLGEQYYRDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKRHRGPGLAAGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLEALLRTDPLEKRALPDPRIDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRRGKGKAKGKGVGGARKKLDAAILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGDDKDDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPPMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
SIO_010081: DPF2
subclass of: SO_0000673
so part of: DPF2
location: join(172976..173007,176942..177102,177190..177297,177534..177697,179892..179984,180291..180369,183492..183629,183891..184019,184206..184318,186298..186379,187019..187095)
location: region:172976-187095:1
so has part: feature:172976-173007:1:exon
so has part: feature:176942-177102:1:exon
so has part: feature:177190-177297:1:exon
so has part: feature:177534-177697:1:exon
so has part: feature:179892-179984:1:exon
so has part: feature:180291-180369:1:exon
so has part: feature:183492-183629:1:exon
so has part: feature:183891-184019:1:exon
so has part: feature:184206-184318:1:exon
so has part: feature:186298-186379:1:exon
so has part: feature:187019-187095:1:exon

XP_054039980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172976-173007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176942-177102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:177190-177297:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177534-177697:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179892-179984:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:180291-180369:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:183492-183629:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:183891-184019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184206-184318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:186298-186379:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:187019-187095:1:exon

LOC128901830
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: LOC128901830
note: solute carrier family 22 member 6-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(189273..196908)
location: region:189273-196908:-1
so has part: feature:189273-196908:-1:exon
subclass of: SO_0000010

128901830
type: Gene
SIO_000068: ncbigene

position:189273:-1
position: 189273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196908:-1
position: 196908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189273-196908:-1:exon

LOC128901830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: LOC128901830
product: solute carrier family 22 member 6-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_054184001.1
SIO_010081: LOC128901830
subclass of: SO_0000673
so part of: LOC128901830
location: complement(join(189273..189467,190050..190249,191002..191110,191590..191804,191963..192072,192657..192780,192962..193130,194575..194678,194767..195186,196804..196908))
location: region:189273-196908:-1
so has part: feature:196804-196908:-1:exon
so has part: feature:194767-195186:-1:exon
so has part: feature:194575-194678:-1:exon
so has part: feature:192962-193130:-1:exon
so has part: feature:192657-192780:-1:exon
so has part: feature:191963-192072:-1:exon
so has part: feature:191590-191804:-1:exon
so has part: feature:191002-191110:-1:exon
so has part: feature:190050-190249:-1:exon
so has part: feature:189273-189467:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196804-196908:-1:exon

position:196804:-1
position: 196804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194767-195186:-1:exon

position:194767:-1
position: 194767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195186:-1
position: 195186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:194575-194678:-1:exon

position:194575:-1
position: 194575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194678:-1
position: 194678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:192962-193130:-1:exon

position:192962:-1
position: 192962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193130:-1
position: 193130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:192657-192780:-1:exon

position:192657:-1
position: 192657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192780:-1
position: 192780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:191963-192072:-1:exon

position:191963:-1
position: 191963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192072:-1
position: 192072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:191590-191804:-1:exon

position:191590:-1
position: 191590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191804:-1
position: 191804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:191002-191110:-1:exon

position:191002:-1
position: 191002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191110:-1
position: 191110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:190050-190249:-1:exon

position:190050:-1
position: 190050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190249:-1
position: 190249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:189273-189467:-1:exon

position:189467:-1
position: 189467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128901830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: LOC128901830
product: solute carrier family 22 member 6-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 Proteins
transcript id: XM_054184000.1
SIO_010081: LOC128901830
subclass of: SO_0000673
so part of: LOC128901830
location: complement(join(189273..189467,190050..190253,191002..191110,191590..191804,191963..192072,192657..192780,192962..193130,193945..194099,194575..194678,194767..195186,196804..196908))
location: region:189273-196908:-1
so has part: feature:196804-196908:-1:exon
so has part: feature:194767-195186:-1:exon
so has part: feature:194575-194678:-1:exon
so has part: feature:193945-194099:-1:exon
so has part: feature:192962-193130:-1:exon
so has part: feature:192657-192780:-1:exon
so has part: feature:191963-192072:-1:exon
so has part: feature:191590-191804:-1:exon
so has part: feature:191002-191110:-1:exon
so has part: feature:190050-190253:-1:exon
so has part: feature:189273-189467:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:196804-196908:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194767-195186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194575-194678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193945-194099:-1:exon

position:193945:-1
position: 193945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194099:-1
position: 194099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:192962-193130:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192657-192780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191963-192072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191590-191804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191002-191110:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190050-190253:-1:exon

position:190253:-1
position: 190253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:189273-189467:-1:exon

LOC128901830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: LOC128901830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 22 member 6-B-like isoform X2
translation: MTFVELLARLGGMGRFQVTYVAALAIPLLMLASHNLLQNFTAGVPEHHCRPRPVANDSTGDVPLLISIPSDGHHRPQRCRRYVELQWHLLEVNGTVNSTANGAATEPCHDGWTYQDGIFAHTIVTEWDLVCESKKLRQVAQSIYMAGILLGSSLFGILSDKHGVDPDGSARRGGHHQWLLLHLRAVRAGGRGLRPPSLALAPARRLPPLLPLLPLLLAVRGVSPVAGDFGETRPGPEGAPQSRPHQREEGGGRQAQRGGAAGAGAPGATTARGDPGLPDPHPRDENRLLWRLLCLVLHQLRLLWAGHGSAGLRGGHLPEPAGLRGCGHPGQAGLGAGHQLRGAAGGPGRLLGARRHLHPRQHRCANGAADAAHGLRGDWKGFIGRLLQLRLHLHRRALPHCHQTGMGLGGTMARVGSMVAPLVRMTADVTPVLPLIIYGAAPIISAIATCFLPETRNVPLPETVKDVERRAGHLKDEEVTVPLSTTKTKEGV
SIO_010081: LOC128901830
subclass of: SO_0000673
so part of: LOC128901830
location: complement(join(189398..189467,190050..190249,191002..191110,191590..191804,191963..192072,192657..192780,192962..193130,194575..194678,194767..195144))
location: region:189398-195144:-1
so has part: feature:194767-195144:-1:exon
so has part: feature:194575-194678:-1:exon
so has part: feature:192962-193130:-1:exon
so has part: feature:192657-192780:-1:exon
so has part: feature:191963-192072:-1:exon
so has part: feature:191590-191804:-1:exon
so has part: feature:191002-191110:-1:exon
so has part: feature:190050-190249:-1:exon
so has part: feature:189398-189467:-1:exon

XP_054039976.1
type: Protein
SIO_000068: ncbiprotein

position:189398:-1
position: 189398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195144:-1
position: 195144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194767-195144:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194575-194678:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192962-193130:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192657-192780:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:191963-192072:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191590-191804:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191002-191110:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190050-190249:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:189398-189467:-1:exon

LOC128901830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: LOC128901830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 22 member 6-like isoform X1
translation: MTFVELLARLGGMGRFQVTYVAALAIPLLMLASHNLLQNFTAGVPEHHCRPRPVANDSTGDVPLLISIPSDGHHRPQRCRRYVELQWHLLEVNGTVNSTANGAATEPCHDGWTYQDGIFAHTIVTEWDLVCESKKLRQVAQSIYMAGILLGSSLFGILSDKFGRRALLTWCYLQLGVTGAGTAAAPTFVVYCLCRFLAGLAMAGVSLNSASLCMEWIPTEARAVVGTINGYCYTFGQFVLAAVAFGLPHWRWLQLVVSLPFFLFFLYSWLFVESARWQVISGRPDLALKGLRKVARINGRKEEGDKLSEEALRELVHREPPLPGGTLASLIRTPGMRTVSCGVSFVWFSTSFAYYGLAMDLQGFGVDIYLSQLVFGAVDIPAKLASVLAISCVGRRVAQGGSLALAGICILANIVVPMELQMLRMAFAVIGKGSLAASFNCAYIFTGELFPTVIRQTGMGLGGTMARVGSMVAPLVRMTADVTPVLPLIIYGAAPIISAIATCFLPETRNVPLPETVKDVERRAGHLKDEEVTVPLSTTKTKEGV
SIO_010081: LOC128901830
subclass of: SO_0000673
so part of: LOC128901830
location: complement(join(189398..189467,190050..190253,191002..191110,191590..191804,191963..192072,192657..192780,192962..193130,193945..194099,194575..194678,194767..195144))
location: region:189398-195144:-1
so has part: feature:194767-195144:-1:exon
so has part: feature:194575-194678:-1:exon
so has part: feature:193945-194099:-1:exon
so has part: feature:192962-193130:-1:exon
so has part: feature:192657-192780:-1:exon
so has part: feature:191963-192072:-1:exon
so has part: feature:191590-191804:-1:exon
so has part: feature:191002-191110:-1:exon
so has part: feature:190050-190253:-1:exon
so has part: feature:189398-189467:-1:exon

XP_054039975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194767-195144:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194575-194678:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193945-194099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192962-193130:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192657-192780:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191963-192072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191590-191804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191002-191110:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190050-190253:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:189398-189467:-1:exon

LOC128901830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: LOC128901830
product: solute carrier family 22 member 6-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_054184002.1
SIO_010081: LOC128901830
subclass of: SO_0000673
so part of: LOC128901830
location: complement(join(190056..190249,191002..191110,191590..191804,191963..192072,192657..192780,192962..193130,193945..194099,194575..194678,194767..195186,196804..196908))
location: region:190056-196908:-1
so has part: feature:196804-196908:-1:exon
so has part: feature:194767-195186:-1:exon
so has part: feature:194575-194678:-1:exon
so has part: feature:193945-194099:-1:exon
so has part: feature:192962-193130:-1:exon
so has part: feature:192657-192780:-1:exon
so has part: feature:191963-192072:-1:exon
so has part: feature:191590-191804:-1:exon
so has part: feature:191002-191110:-1:exon
so has part: feature:190056-190249:-1:exon

position:190056:-1
position: 190056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196804-196908:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194767-195186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194575-194678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193945-194099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192962-193130:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192657-192780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191963-192072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191590-191804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191002-191110:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190056-190249:-1:exon

LOC128901830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: LOC128901830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 22 member 6-like isoform X3
translation: MTFVELLARLGGMGRFQVTYVAALAIPLLMLASHNLLQNFTAGVPEHHCRPRPVANDSTGDVPLLISIPSDGHHRPQRCRRYVELQWHLLEVNGTVNSTANGAATEPCHDGWTYQDGIFAHTIVTEWDLVCESKKLRQVAQSIYMAGILLGSSLFGILSDKFGRRALLTWCYLQLGVTGAGTAAAPTFVVYCLCRFLAGLAMAGVSLNSASLCMEWIPTEARAVVGTINGYCYTFGQFVLAAVAFGLPHWRWLQLVVSLPFFLFFLYSWLFVESARWQVISGRPDLALKGLRKVARINGRKEEGDKLSEEALRELVHREPPLPGGTLASLIRTPGMRTVSCGVSFVWFSTSFAYYGLAMDLQGFGVDIYLSQLVFGAVDIPAKLASVLAISCVGRRVAQGGSLALAGICILANIVVPMELQMLRMAFAVIGKGSLAASFNCAYIFTGELFPTVIRRGWAWGALWLVWVAWWPRWCA
SIO_010081: LOC128901830
subclass of: SO_0000673
so part of: LOC128901830
location: complement(join(190183..190249,191002..191110,191590..191804,191963..192072,192657..192780,192962..193130,193945..194099,194575..194678,194767..195144))
location: region:190183-195144:-1
so has part: feature:194767-195144:-1:exon
so has part: feature:194575-194678:-1:exon
so has part: feature:193945-194099:-1:exon
so has part: feature:192962-193130:-1:exon
so has part: feature:192657-192780:-1:exon
so has part: feature:191963-192072:-1:exon
so has part: feature:191590-191804:-1:exon
so has part: feature:191002-191110:-1:exon
so has part: feature:190183-190249:-1:exon

XP_054039977.1
type: Protein
SIO_000068: ncbiprotein

position:190183:-1
position: 190183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194767-195144:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194575-194678:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193945-194099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192962-193130:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192657-192780:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191963-192072:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191590-191804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191002-191110:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190183-190249:-1:exon

LOC128901829
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: LOC128901829
note: solute carrier family 22 member 6-A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(197741..202462)
location: region:197741-202462:-1
so has part: feature:197741-202462:-1:exon
subclass of: SO_0000010

128901829
type: Gene
SIO_000068: ncbigene

position:197741:-1
position: 197741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202462:-1
position: 202462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197741-202462:-1:exon

LOC128901829
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: LOC128901829
product: solute carrier family 22 member 6-A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins
transcript id: XM_054183998.1
SIO_010081: LOC128901829
subclass of: SO_0000673
so part of: LOC128901829
location: complement(join(197741..198083,198457..198660,198749..198857,199111..199325,199625..199740,200280..200403,200699..200867,200948..201102,201215..201318,201776..202457))
location: region:197741-202457:-1
so has part: feature:201776-202457:-1:exon
so has part: feature:201215-201318:-1:exon
so has part: feature:200948-201102:-1:exon
so has part: feature:200699-200867:-1:exon
so has part: feature:200280-200403:-1:exon
so has part: feature:199625-199740:-1:exon
so has part: feature:199111-199325:-1:exon
so has part: feature:198749-198857:-1:exon
so has part: feature:198457-198660:-1:exon
so has part: feature:197741-198083:-1:exon

position:202457:-1
position: 202457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201776-202457:-1:exon

position:201776:-1
position: 201776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:201215-201318:-1:exon

position:201215:-1
position: 201215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201318:-1
position: 201318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:200948-201102:-1:exon

position:200948:-1
position: 200948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201102:-1
position: 201102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:200699-200867:-1:exon

position:200699:-1
position: 200699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200867:-1
position: 200867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:200280-200403:-1:exon

position:200280:-1
position: 200280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200403:-1
position: 200403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:199625-199740:-1:exon

position:199625:-1
position: 199625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199740:-1
position: 199740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:199111-199325:-1:exon

position:199111:-1
position: 199111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199325:-1
position: 199325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:198749-198857:-1:exon

position:198749:-1
position: 198749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198857:-1
position: 198857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:198457-198660:-1:exon

position:198457:-1
position: 198457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198660:-1
position: 198660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:197741-198083:-1:exon

position:198083:-1
position: 198083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128901829
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: LOC128901829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 22 member 6-A-like isoform X1
translation: MAFASLLEHVGGMGRFQVASVLLLALPVLMMASHNLLQNFTAATSDHRCRLRWEANTTGLDPQDLLRVSVPRGERCRRFVTPQWWLLEANGSAPNSSWPETEPCHDGWTYDRSVFTSTIITEWDLVCSSRGLKQLAQSLYMAGVLVGGIVFGGLSDRFGRRSLLTWCYLQMGTMGTCSSFAPTFTVYCVFRFLTGMAFSGIVLNSVSLSLEWMPTRTRALVGTFMGYCYTTGQFLLAGIAYAVPDWRWLQLTVSLPFFCFFLYSWWLTESARWLVMVGKSHQALKELQKVARINGKKEEGDKLDIEALRSYMQKEMASSGSHHTVLDLVRTPVVRRISCCLCFVWFSTSFAYYGLAMDLQNFDFNIYVIQLIFGAVDIPAKLLSILTITFVGRRFTQSIALILAGLAILANILVPRDLRMLRTALAVFGKGCLAASFNCVFLYTGELYPTVIRQTGMGLANTMARLGSITAPLVKMAGEVFPVLPFIIYGAAPVVSGLVAIFLPETRDMALPETVEEVEGRTHPQKDEAQDLHIPLQPTGTTGPC
SIO_010081: LOC128901829
subclass of: SO_0000673
so part of: LOC128901829
location: complement(join(198008..198083,198457..198660,198749..198857,199111..199325,199625..199740,200280..200403,200699..200867,200948..201102,201215..201318,201776..202141))
location: region:198008-202141:-1
so has part: feature:201776-202141:-1:exon
so has part: feature:201215-201318:-1:exon
so has part: feature:200948-201102:-1:exon
so has part: feature:200699-200867:-1:exon
so has part: feature:200280-200403:-1:exon
so has part: feature:199625-199740:-1:exon
so has part: feature:199111-199325:-1:exon
so has part: feature:198749-198857:-1:exon
so has part: feature:198457-198660:-1:exon
so has part: feature:198008-198083:-1:exon

XP_054039973.1
type: Protein
SIO_000068: ncbiprotein

position:198008:-1
position: 198008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202141:-1
position: 202141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201776-202141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201215-201318:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200948-201102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200699-200867:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200280-200403:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199625-199740:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199111-199325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198749-198857:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198457-198660:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:198008-198083:-1:exon

LOC128901829
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: LOC128901829
product: solute carrier family 22 member 6-A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_054183999.1
SIO_010081: LOC128901829
subclass of: SO_0000673
so part of: LOC128901829
location: complement(join(198551..198656,198749..198857,199111..199325,199625..199740,200280..200403,200699..200867,200948..201102,201215..201318,201776..202462))
location: region:198551-202462:-1
so has part: feature:201776-202462:-1:exon
so has part: feature:201215-201318:-1:exon
so has part: feature:200948-201102:-1:exon
so has part: feature:200699-200867:-1:exon
so has part: feature:200280-200403:-1:exon
so has part: feature:199625-199740:-1:exon
so has part: feature:199111-199325:-1:exon
so has part: feature:198749-198857:-1:exon
so has part: feature:198551-198656:-1:exon

position:198551:-1
position: 198551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201776-202462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201215-201318:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200948-201102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200699-200867:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200280-200403:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199625-199740:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199111-199325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198749-198857:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198551-198656:-1:exon

position:198656:-1
position: 198656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128901829
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: LOC128901829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 22 member 6-A-like isoform X2
translation: MAFASLLEHVGGMGRFQVASVLLLALPVLMMASHNLLQNFTAATSDHRCRLRWEANTTGLDPQDLLRVSVPRGERCRRFVTPQWWLLEANGSAPNSSWPETEPCHDGWTYDRSVFTSTIITEWDLVCSSRGLKQLAQSLYMAGVLVGGIVFGGLSDRFGRRSLLTWCYLQMGTMGTCSSFAPTFTVYCVFRFLTGMAFSGIVLNSVSLSLEWMPTRTRALVGTFMGYCYTTGQFLLAGIAYAVPDWRWLQLTVSLPFFCFFLYSWWLTESARWLVMVGKSHQALKELQKVARINGKKEEGDKLDIEALRSYMQKEMASSGSHHTVLDLVRTPVVRRISCCLCFVWFSTSFAYYGLAMDLQNFDFNIYVIQLIFGAVDIPAKLLSILTITFVGRRFTQSIALILAGLAILANILVPRDLRMLRTALAVFGKGCLAASFNCVFLYTGELYPTVIRQAWGWPTPWPVWAASRPPW
SIO_010081: LOC128901829
subclass of: SO_0000673
so part of: LOC128901829
location: complement(join(198596..198656,198749..198857,199111..199325,199625..199740,200280..200403,200699..200867,200948..201102,201215..201318,201776..202141))
location: region:198596-202141:-1
so has part: feature:201776-202141:-1:exon
so has part: feature:201215-201318:-1:exon
so has part: feature:200948-201102:-1:exon
so has part: feature:200699-200867:-1:exon
so has part: feature:200280-200403:-1:exon
so has part: feature:199625-199740:-1:exon
so has part: feature:199111-199325:-1:exon
so has part: feature:198749-198857:-1:exon
so has part: feature:198596-198656:-1:exon

XP_054039974.1
type: Protein
SIO_000068: ncbiprotein

position:198596:-1
position: 198596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201776-202141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201215-201318:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200948-201102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200699-200867:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200280-200403:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199625-199740:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199111-199325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198749-198857:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198596-198656:-1:exon

LOC128901827
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: LOC128901827
note: solute carrier family 22 member 6-A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(203420..209916)
location: region:203420-209916:-1
so has part: feature:203420-209916:-1:exon
subclass of: SO_0000010

128901827
type: Gene
SIO_000068: ncbigene

position:203420:-1
position: 203420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209916:-1
position: 209916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203420-209916:-1:exon

LOC128901827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: LOC128901827
product: solute carrier family 22 member 6-A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins
transcript id: XM_054183991.1
SIO_010081: LOC128901827
subclass of: SO_0000673
so part of: LOC128901827
location: complement(join(203420..203854,204505..204708,204817..204925,205440..205654,205958..206073,206154..206277,206362..206530,207031..207185,207291..207394,207708..208344,209897..209916))
location: region:203420-209916:-1
so has part: feature:209897-209916:-1:exon
so has part: feature:207708-208344:-1:exon
so has part: feature:207291-207394:-1:exon
so has part: feature:207031-207185:-1:exon
so has part: feature:206362-206530:-1:exon
so has part: feature:206154-206277:-1:exon
so has part: feature:205958-206073:-1:exon
so has part: feature:205440-205654:-1:exon
so has part: feature:204817-204925:-1:exon
so has part: feature:204505-204708:-1:exon
so has part: feature:203420-203854:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:209897-209916:-1:exon

position:209897:-1
position: 209897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:207708-208344:-1:exon

position:207708:-1
position: 207708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208344:-1
position: 208344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:207291-207394:-1:exon

position:207291:-1
position: 207291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207394:-1
position: 207394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:207031-207185:-1:exon

position:207031:-1
position: 207031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207185:-1
position: 207185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:206362-206530:-1:exon

position:206362:-1
position: 206362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206530:-1
position: 206530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:206154-206277:-1:exon

position:206154:-1
position: 206154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206277:-1
position: 206277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:205958-206073:-1:exon

position:205958:-1
position: 205958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206073:-1
position: 206073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:205440-205654:-1:exon

position:205440:-1
position: 205440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205654:-1
position: 205654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:204817-204925:-1:exon

position:204817:-1
position: 204817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204925:-1
position: 204925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:204505-204708:-1:exon

position:204505:-1
position: 204505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204708:-1
position: 204708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:203420-203854:-1:exon

position:203854:-1
position: 203854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128901827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: LOC128901827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 22 member 6-A-like isoform X1
translation: MPFGAVLEQVGGLGRFQVLQTALLAVPILLMASHNLLQNFTAAVPPHRCRVPSVTPGPATTPSVPSATPGPPGATRDGTWAASDGTLRSSNAILKSPDGTLGSPHATLRSPDGNLGSPNGTHIPGATHITRDGTPGSPDGTHVQPDAALGSSNATLGWSNSTLGPPDATLGSCRRYVASSPANRSTGPWPTEPCHDGWDYDRSIYVATIVTEWDLVCSYRQLRQMAQSIYMAGVLVGALVLGGLSDRFGRKAMLMWSYLQLGVMGTCTAFAPNYASYCVFRFAGGMALSGFGLSIACLVVEWIPTPYRAITVAITGFAYTLGQILLAGVAYAVPHWRWLQLTVSLPFFVFLLYSWWLAESARWLVLSGKAERAVKVLQRVARINKRKEEGEKITVEILKSNMKEELAGLKSSYTISDLVRTPVIRHIFFCLSIVWFSISFSYYGLAMDLQNFGVSIYLIQVIFGAVDFPAKVVVTISVSYIGRRVSLMVALFLAGLVIIANIFVSTELQTVRTALAVIGKGCLSASFNCVFLYTTELYPTPIRQTGLGFGSTMARVGGIVAPLVKMMDEYYPFLPPAVYGVAPVVAAVAAGFLPETLNRPLPDTIEEVESRAKRKKTDDPKEKIPLQPQDKAPQKEA
SIO_010081: LOC128901827
subclass of: SO_0000673
so part of: LOC128901827
location: complement(join(203773..203854,204505..204708,204817..204925,205440..205654,205958..206073,206154..206277,206362..206530,207031..207185,207291..207394,207708..208343))
location: region:203773-208343:-1
so has part: feature:207708-208343:-1:exon
so has part: feature:207291-207394:-1:exon
so has part: feature:207031-207185:-1:exon
so has part: feature:206362-206530:-1:exon
so has part: feature:206154-206277:-1:exon
so has part: feature:205958-206073:-1:exon
so has part: feature:205440-205654:-1:exon
so has part: feature:204817-204925:-1:exon
so has part: feature:204505-204708:-1:exon
so has part: feature:203773-203854:-1:exon

XP_054039966.1
type: Protein
SIO_000068: ncbiprotein

position:203773:-1
position: 203773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208343:-1
position: 208343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207708-208343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207291-207394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207031-207185:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206362-206530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206154-206277:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205958-206073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205440-205654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:204817-204925:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204505-204708:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:203773-203854:-1:exon

LOC128901827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: LOC128901827
product: solute carrier family 22 member 6-A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_054183992.1
SIO_010081: LOC128901827
subclass of: SO_0000673
so part of: LOC128901827
location: complement(join(204513..204708,204817..204925,205579..205654,205958..206073,206154..206277,206362..206530,207031..207185,207291..207394,207708..208344,209897..209916))
location: region:204513-209916:-1
so has part: feature:209897-209916:-1:exon
so has part: feature:207708-208344:-1:exon
so has part: feature:207291-207394:-1:exon
so has part: feature:207031-207185:-1:exon
so has part: feature:206362-206530:-1:exon
so has part: feature:206154-206277:-1:exon
so has part: feature:205958-206073:-1:exon
so has part: feature:205579-205654:-1:exon
so has part: feature:204817-204925:-1:exon
so has part: feature:204513-204708:-1:exon

position:204513:-1
position: 204513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209897-209916:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207708-208344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207291-207394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207031-207185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206362-206530:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206154-206277:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205958-206073:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205579-205654:-1:exon

position:205579:-1
position: 205579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:204817-204925:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:204513-204708:-1:exon

LOC128901827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: LOC128901827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 22 member 6-A-like isoform X2
translation: MPFGAVLEQVGGLGRFQVLQTALLAVPILLMASHNLLQNFTAAVPPHRCRVPSVTPGPATTPSVPSATPGPPGATRDGTWAASDGTLRSSNAILKSPDGTLGSPHATLRSPDGNLGSPNGTHIPGATHITRDGTPGSPDGTHVQPDAALGSSNATLGWSNSTLGPPDATLGSCRRYVASSPANRSTGPWPTEPCHDGWDYDRSIYVATIVTEWDLVCSYRQLRQMAQSIYMAGVLVGALVLGGLSDRFGRKAMLMWSYLQLGVMGTCTAFAPNYASYCVFRFAGGMALSGFGLSIACLVVEWIPTPYRAITVAITGFAYTLGQILLAGVAYAVPHWRWLQLTVSLPFFVFLLYSWWLAESARWLVLSGKAERAVKVLQRVARINKRKEEGEKITVEILKSNMKEELAGLKSSYTISDLVRTPVIRHIFFCLSIVWFSISFSYYGLAMDLQNFGVSIYLIQSCRRCARRWPSSARVASPPPSTASSSTPPSSTPLPSGRPGWALAAPWPEWVASWRHW
SIO_010081: LOC128901827
subclass of: SO_0000673
so part of: LOC128901827
location: complement(join(204644..204708,204817..204925,205579..205654,205958..206073,206154..206277,206362..206530,207031..207185,207291..207394,207708..208343))
location: region:204644-208343:-1
so has part: feature:207708-208343:-1:exon
so has part: feature:207291-207394:-1:exon
so has part: feature:207031-207185:-1:exon
so has part: feature:206362-206530:-1:exon
so has part: feature:206154-206277:-1:exon
so has part: feature:205958-206073:-1:exon
so has part: feature:205579-205654:-1:exon
so has part: feature:204817-204925:-1:exon
so has part: feature:204644-204708:-1:exon

XP_054039967.1
type: Protein
SIO_000068: ncbiprotein

position:204644:-1
position: 204644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207708-208343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207291-207394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207031-207185:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206362-206530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206154-206277:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205958-206073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205579-205654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:204817-204925:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204644-204708:-1:exon

LOC128901833
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: LOC128901833
note: uncharacterized LOC128901833; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 205678..209568
location: region:205678-209568:1
so has part: feature:205678-209568:1:exon
subclass of: SO_0000011

128901833
type: Gene
SIO_000068: ncbigene

position:205678:1
position: 205678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209568:1
position: 209568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205678-209568:1:exon

LOC128901833
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 75485
nc RNA class: lncRNA
gene: LOC128901833
product: uncharacterized LOC128901833
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008463533.1
SIO_010081: LOC128901833
subclass of: SO_0000673
so part of: LOC128901833
location: join(205678..205764,205928..206097,206214..206400,207035..207151,208239..209568)
location: region:205678-209568:1
so has part: feature:205678-205764:1:exon
so has part: feature:205928-206097:1:exon
so has part: feature:206214-206400:1:exon
so has part: feature:207035-207151:1:exon
so has part: feature:208239-209568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205678-205764:1:exon

position:205764:1
position: 205764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205928-206097:1:exon

position:205928:1
position: 205928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206097:1
position: 206097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:206214-206400:1:exon

position:206214:1
position: 206214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206400:1
position: 206400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:207035-207151:1:exon

position:207035:1
position: 207035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207151:1
position: 207151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:208239-209568:1:exon

position:208239:1
position: 208239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128901796
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: LOC128901796
note: dr1-associated corepressor-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(211818..215063)
location: region:211818-215063:-1
so has part: feature:211818-215063:-1:exon
subclass of: SO_0000010

128901796
type: Gene
SIO_000068: ncbigene

position:211818:-1
position: 211818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215063:-1
position: 215063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211818-215063:-1:exon

LOC128901796
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: LOC128901796
product: dr1-associated corepressor-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_054183944.1
SIO_010081: LOC128901796
subclass of: SO_0000673
so part of: LOC128901796
location: complement(join(211818..211955,212307..212389,212774..212864,213341..213466,213958..214052,214425..214497,215040..215063))
location: region:211818-215063:-1
so has part: feature:215040-215063:-1:exon
so has part: feature:214425-214497:-1:exon
so has part: feature:213958-214052:-1:exon
so has part: feature:213341-213466:-1:exon
so has part: feature:212774-212864:-1:exon
so has part: feature:212307-212389:-1:exon
so has part: feature:211818-211955:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215040-215063:-1:exon

position:215040:-1
position: 215040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214425-214497:-1:exon

position:214425:-1
position: 214425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214497:-1
position: 214497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:213958-214052:-1:exon

position:213958:-1
position: 213958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214052:-1
position: 214052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:213341-213466:-1:exon

position:213341:-1
position: 213341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213466:-1
position: 213466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:212774-212864:-1:exon

position:212774:-1
position: 212774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212864:-1
position: 212864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:212307-212389:-1:exon

position:212307:-1
position: 212307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212389:-1
position: 212389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:211818-211955:-1:exon

position:211955:-1
position: 211955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128901796
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: LOC128901796
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: dr1-associated corepressor-like
translation: MATGEWGGARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLRKACHVTQSRNAKTMTTSHLKQCIELEQQFDFLKDPGGRPCPTCRGEGRGAPRLRGERGPRRGRRPGAGRKNGGPGAKGKDPKQSGTDSEQEEDSEDSDSDGEEETPQPPPARPPLNFASPGVPFAPLGPPALPGGLPGGLPPAPGPPRAREDEEEEEDYDS
SIO_010081: LOC128901796
subclass of: SO_0000673
so part of: LOC128901796
location: complement(join(211826..211955,212307..212389,212774..212864,213341..213466,213958..214052,214425..214497,215040..215063))
location: region:211826-215063:-1
so has part: feature:215040-215063:-1:exon
so has part: feature:214425-214497:-1:exon
so has part: feature:213958-214052:-1:exon
so has part: feature:213341-213466:-1:exon
so has part: feature:212774-212864:-1:exon
so has part: feature:212307-212389:-1:exon
so has part: feature:211826-211955:-1:exon

XP_054039919.1
type: Protein
SIO_000068: ncbiprotein

position:211826:-1
position: 211826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215040-215063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214425-214497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213958-214052:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:213341-213466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:212774-212864:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:212307-212389:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211826-211955:-1:exon

B3GAT3
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: B3GAT3
note: beta-1,3-glucuronyltransferase 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(215550..219899)
location: region:215550-219899:-1
so has part: feature:215550-219899:-1:exon
subclass of: SO_0000010

128901816
type: Gene
SIO_000068: ncbigene

position:215550:-1
position: 215550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219899:-1
position: 219899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215550-219899:-1:exon

B3GAT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: B3GAT3
product: beta-1,3-glucuronyltransferase 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons
transcript id: XM_054183974.1
SIO_010081: B3GAT3
subclass of: SO_0000673
so part of: B3GAT3
location: complement(join(215550..215818,216280..216569,217406..217737,218342..218499,218622..218805,219727..219899))
location: region:215550-219899:-1
so has part: feature:219727-219899:-1:exon
so has part: feature:218622-218805:-1:exon
so has part: feature:218342-218499:-1:exon
so has part: feature:217406-217737:-1:exon
so has part: feature:216280-216569:-1:exon
so has part: feature:215550-215818:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219727-219899:-1:exon

position:219727:-1
position: 219727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218622-218805:-1:exon

position:218622:-1
position: 218622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218805:-1
position: 218805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:218342-218499:-1:exon

position:218342:-1
position: 218342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218499:-1
position: 218499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:217406-217737:-1:exon

position:217406:-1
position: 217406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217737:-1
position: 217737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:216280-216569:-1:exon

position:216280:-1
position: 216280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216569:-1
position: 216569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:215550-215818:-1:exon

position:215818:-1
position: 215818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

B3GAT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: B3GAT3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3
translation: MRVKLKNIFIIYFVVSLVGLLCALLQLGQPCDCTQQRRGRDRERLLGELRGGGGPGGGPGGRGGARVLPTIYVVTPTYARPVQKAELVRLSQTLLHVRALHWVVVEDAPAPTALVGGLLAASGVPYTHLNVETPPEIRRRPGDPPWLRPRGVEQRNRALQWLRETRLPGEGGVVYFADDDNTYSLRLFEEMRSTRGVAVWPVGLVGGLRFERPLVAGGRVVGFHTAWKPERPFPLDMAGFAVXLPLLLAHPAARFDPQAERGYLESSLLGGLVSPAELEPKADNCTQVLVWHTRTEKPKLRQEEQLQREGRGFRPPTSRCEGPPRPPPQHHRDPPRGTLGLYLLMGTPFFFPWEGARTPFPWGQASSPQ
SIO_010081: B3GAT3
subclass of: SO_0000673
so part of: B3GAT3
location: complement(join(215570..215818,216280..216569,217406..217737,218342..218499,218622..218703))
location: region:215570-218703:-1
so has part: feature:218622-218703:-1:exon
so has part: feature:218342-218499:-1:exon
so has part: feature:217406-217737:-1:exon
so has part: feature:216280-216569:-1:exon
so has part: feature:215570-215818:-1:exon

XP_054039949.1
type: Protein
SIO_000068: ncbiprotein

position:215570:-1
position: 215570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218703:-1
position: 218703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218622-218703:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218342-218499:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217406-217737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216280-216569:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215570-215818:-1:exon

GANAB
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: GANAB
note: glucosidase II alpha subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(220558..230030)
location: region:220558-230030:-1
so has part: feature:220558-230030:-1:exon
subclass of: SO_0000010

128901815
type: Gene
SIO_000068: ncbigene

position:220558:-1
position: 220558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230030:-1
position: 230030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220558-230030:-1:exon

GANAB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: GANAB
product: glucosidase II alpha subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_054183973.1
SIO_010081: GANAB
subclass of: SO_0000673
so part of: GANAB
location: complement(join(220558..220701,220802..220902,220990..221102,221194..221307,221403..221477,221608..221684,221811..221875,222805..223048,223141..223242,223670..223766,223889..224032,224470..224549,224640..224766,224866..225101,226465..226618,226693..226873,227004..227100,227199..227283,227415..227514,228353..228532,228621..228748,229006..229114,229227..229331,229987..230030))
location: region:220558-230030:-1
so has part: feature:229987-230030:-1:exon
so has part: feature:229227-229331:-1:exon
so has part: feature:229006-229114:-1:exon
so has part: feature:228621-228748:-1:exon
so has part: feature:228353-228532:-1:exon
so has part: feature:227415-227514:-1:exon
so has part: feature:227199-227283:-1:exon
so has part: feature:227004-227100:-1:exon
so has part: feature:226693-226873:-1:exon
so has part: feature:226465-226618:-1:exon
so has part: feature:224866-225101:-1:exon
so has part: feature:224640-224766:-1:exon
so has part: feature:224470-224549:-1:exon
so has part: feature:223889-224032:-1:exon
so has part: feature:223670-223766:-1:exon
so has part: feature:223141-223242:-1:exon
so has part: feature:222805-223048:-1:exon
so has part: feature:221811-221875:-1:exon
so has part: feature:221608-221684:-1:exon
so has part: feature:221403-221477:-1:exon
so has part: feature:221194-221307:-1:exon
so has part: feature:220990-221102:-1:exon
so has part: feature:220802-220902:-1:exon
so has part: feature:220558-220701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229987-230030:-1:exon

position:229987:-1
position: 229987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:229227-229331:-1:exon

position:229227:-1
position: 229227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229331:-1
position: 229331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:229006-229114:-1:exon

position:229006:-1
position: 229006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229114:-1
position: 229114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:228621-228748:-1:exon

position:228621:-1
position: 228621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228748:-1
position: 228748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:228353-228532:-1:exon

position:228353:-1
position: 228353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228532:-1
position: 228532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:227415-227514:-1:exon

position:227415:-1
position: 227415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227514:-1
position: 227514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:227199-227283:-1:exon

position:227199:-1
position: 227199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227283:-1
position: 227283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:227004-227100:-1:exon

position:227004:-1
position: 227004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227100:-1
position: 227100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:226693-226873:-1:exon

position:226693:-1
position: 226693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226873:-1
position: 226873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:226465-226618:-1:exon

position:226465:-1
position: 226465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226618:-1
position: 226618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:224866-225101:-1:exon

position:224866:-1
position: 224866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225101:-1
position: 225101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:224640-224766:-1:exon

position:224640:-1
position: 224640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224766:-1
position: 224766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:224470-224549:-1:exon

position:224470:-1
position: 224470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224549:-1
position: 224549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:223889-224032:-1:exon

position:223889:-1
position: 223889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224032:-1
position: 224032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:223670-223766:-1:exon

position:223670:-1
position: 223670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223766:-1
position: 223766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:223141-223242:-1:exon

position:223141:-1
position: 223141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223242:-1
position: 223242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:222805-223048:-1:exon

position:222805:-1
position: 222805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223048:-1
position: 223048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:221811-221875:-1:exon

position:221811:-1
position: 221811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221875:-1
position: 221875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:221608-221684:-1:exon

position:221608:-1
position: 221608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221684:-1
position: 221684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:221403-221477:-1:exon

position:221403:-1
position: 221403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221477:-1
position: 221477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:221194-221307:-1:exon

position:221194:-1
position: 221194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221307:-1
position: 221307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:220990-221102:-1:exon

position:220990:-1
position: 220990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221102:-1
position: 221102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:220802-220902:-1:exon

position:220802:-1
position: 220802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220902:-1
position: 220902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:220558-220701:-1:exon

position:220701:-1
position: 220701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GANAB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: GANAB
product: glucosidase II alpha subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
transcript id: XM_054183972.1
SIO_010081: GANAB
subclass of: SO_0000673
so part of: GANAB
location: complement(join(220558..220701,220802..220902,220990..221102,221194..221307,221403..221477,221608..221684,221811..221875,222805..223048,223141..223242,223670..223766,223889..224032,224470..224549,224640..224766,224866..225101,226465..226618,226693..226873,227004..227100,227199..227283,227415..227514,227907..227972,228353..228532,228621..228748,229006..229114,229227..229331,229987..230030))
location: region:220558-230030:-1
so has part: feature:229987-230030:-1:exon
so has part: feature:229227-229331:-1:exon
so has part: feature:229006-229114:-1:exon
so has part: feature:228621-228748:-1:exon
so has part: feature:228353-228532:-1:exon
so has part: feature:227907-227972:-1:exon
so has part: feature:227415-227514:-1:exon
so has part: feature:227199-227283:-1:exon
so has part: feature:227004-227100:-1:exon
so has part: feature:226693-226873:-1:exon
so has part: feature:226465-226618:-1:exon
so has part: feature:224866-225101:-1:exon
so has part: feature:224640-224766:-1:exon
so has part: feature:224470-224549:-1:exon
so has part: feature:223889-224032:-1:exon
so has part: feature:223670-223766:-1:exon
so has part: feature:223141-223242:-1:exon
so has part: feature:222805-223048:-1:exon
so has part: feature:221811-221875:-1:exon
so has part: feature:221608-221684:-1:exon
so has part: feature:221403-221477:-1:exon
so has part: feature:221194-221307:-1:exon
so has part: feature:220990-221102:-1:exon
so has part: feature:220802-220902:-1:exon
so has part: feature:220558-220701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229987-230030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:229227-229331:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229006-229114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:228621-228748:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228353-228532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227907-227972:-1:exon

position:227907:-1
position: 227907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227972:-1
position: 227972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:227415-227514:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227199-227283:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227004-227100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:226693-226873:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:226465-226618:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:224866-225101:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:224640-224766:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:224470-224549:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:223889-224032:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:223670-223766:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:223141-223242:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:222805-223048:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:221811-221875:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:221608-221684:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:221403-221477:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:221194-221307:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:220990-221102:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:220802-220902:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:220558-220701:-1:exon

GANAB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: GANAB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neutral alpha-glucosidase AB isoform X2
translation: MAAAPGRRRRPAELLWATLCLGAALAVDRSNFKTCEQSGFCRRQRGLQPGESPYRALLESLQLGPDAARLQLINEATKVPLLLELWGLQGNMTRIRIKELNPLRPRFEVPDVLVGEPPVERLSVTGRDEGSLELSLGPAGHRLLVTEKPFRMDLLQGRELLCSVNARGLLFFEHLRRRRDSDPPKDPTAEEGAATEGQEEAAGGTEDAGNQSEKPTEPTAEATEEPGSWEETFKTHTDTKPNGPTSVGLDFSLPGFEHVYGIPEHADNLRLRTTEGGDPYRLYNLDVFQYELYNPMALYGSVPLLLAHGARRTLGVFWLNAAETWVDISSNTAGKTLFGKLLDYMQGGGETPQTDVRWMSESGIIDVFLLLGPSPSAVAGQYAALTGTQALPPLFALGYHQSRWNYNDEEDVAAVERGFEDHAVPCDVLWLDIEHADGKRYFTWDPSKFPQPRAMLERLAAKKRKMVSIVDPHIKVDSGYRVHNELRSRGFYVKTKDGNDYEGWCWPGSAAYPDFTNPEMRAWWASMFAYDQYEGSTENLFTWNDMNEPSVFSGPEVTMHKDAVHHGGWEHRDLHNLYGLYVQMATAEGQIQRSGGQRRPFVLSRAFFAGSQRYGAVWTGDNAAEWDHLKISIPMCLSFGLAGLSFCGADVGGFFKNPEAELLVRWYQAGAFQPFFRAHAHLDTARREPWLFGEETAGLIREAVRRRYALLPFWYTAFYRSHRHGVPVMRPLWMEYPEDTTTFAIDDQYMIDRALLVHPVTEQGARGVQVYLPGKGEVWYDVVSHQKHHAPQTLYVPVTLSSVPVYQRGGTVVPRQERVRRSTECMRGDPFTLYVALSPQGTAEGDLFLDDGQSFDYQTKARYLHRQFTFAGNTLTASSADPKGSFDTPAWLERVVILGAGKPAAVILRPADGPETRLDFHHEAETSVLTLRKPGVPIGADWAIVLR
SIO_010081: GANAB
subclass of: SO_0000673
so part of: GANAB
location: complement(join(220592..220701,220802..220902,220990..221102,221194..221307,221403..221477,221608..221684,221811..221875,222805..223048,223141..223242,223670..223766,223889..224032,224470..224549,224640..224766,224866..225101,226465..226618,226693..226873,227004..227100,227199..227283,227415..227514,228353..228532,228621..228748,229006..229114,229227..229331,229987..230006))
location: region:220592-230006:-1
so has part: feature:229987-230006:-1:exon
so has part: feature:229227-229331:-1:exon
so has part: feature:229006-229114:-1:exon
so has part: feature:228621-228748:-1:exon
so has part: feature:228353-228532:-1:exon
so has part: feature:227415-227514:-1:exon
so has part: feature:227199-227283:-1:exon
so has part: feature:227004-227100:-1:exon
so has part: feature:226693-226873:-1:exon
so has part: feature:226465-226618:-1:exon
so has part: feature:224866-225101:-1:exon
so has part: feature:224640-224766:-1:exon
so has part: feature:224470-224549:-1:exon
so has part: feature:223889-224032:-1:exon
so has part: feature:223670-223766:-1:exon
so has part: feature:223141-223242:-1:exon
so has part: feature:222805-223048:-1:exon
so has part: feature:221811-221875:-1:exon
so has part: feature:221608-221684:-1:exon
so has part: feature:221403-221477:-1:exon
so has part: feature:221194-221307:-1:exon
so has part: feature:220990-221102:-1:exon
so has part: feature:220802-220902:-1:exon
so has part: feature:220592-220701:-1:exon

XP_054039948.1
type: Protein
SIO_000068: ncbiprotein

position:220592:-1
position: 220592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230006:-1
position: 230006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229987-230006:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:229227-229331:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229006-229114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:228621-228748:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228353-228532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227415-227514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227199-227283:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227004-227100:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:226693-226873:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:226465-226618:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:224866-225101:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:224640-224766:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:224470-224549:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:223889-224032:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:223670-223766:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:223141-223242:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:222805-223048:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:221811-221875:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:221608-221684:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:221403-221477:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:221194-221307:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:220990-221102:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:220802-220902:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:220592-220701:-1:exon

GANAB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: GANAB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neutral alpha-glucosidase AB isoform X1
translation: MAAAPGRRRRPAELLWATLCLGAALAVDRSNFKTCEQSGFCRRQRGLQPGESPYRALLESLQLGPDAARLQLINEATKVPLLLELWGLQGNMTRIRIKELNPLRPRFEVPDVLVGEPPVERLSVTGRDEGSLELSLGPAGHRLLVTEKPFRMDLLQGRELLCSVNARGLLFFEHLRRRRDSFSDKVSSSVGSLWDKIKTLFHRDPPKDPTAEEGAATEGQEEAAGGTEDAGNQSEKPTEPTAEATEEPGSWEETFKTHTDTKPNGPTSVGLDFSLPGFEHVYGIPEHADNLRLRTTEGGDPYRLYNLDVFQYELYNPMALYGSVPLLLAHGARRTLGVFWLNAAETWVDISSNTAGKTLFGKLLDYMQGGGETPQTDVRWMSESGIIDVFLLLGPSPSAVAGQYAALTGTQALPPLFALGYHQSRWNYNDEEDVAAVERGFEDHAVPCDVLWLDIEHADGKRYFTWDPSKFPQPRAMLERLAAKKRKMVSIVDPHIKVDSGYRVHNELRSRGFYVKTKDGNDYEGWCWPGSAAYPDFTNPEMRAWWASMFAYDQYEGSTENLFTWNDMNEPSVFSGPEVTMHKDAVHHGGWEHRDLHNLYGLYVQMATAEGQIQRSGGQRRPFVLSRAFFAGSQRYGAVWTGDNAAEWDHLKISIPMCLSFGLAGLSFCGADVGGFFKNPEAELLVRWYQAGAFQPFFRAHAHLDTARREPWLFGEETAGLIREAVRRRYALLPFWYTAFYRSHRHGVPVMRPLWMEYPEDTTTFAIDDQYMIDRALLVHPVTEQGARGVQVYLPGKGEVWYDVVSHQKHHAPQTLYVPVTLSSVPVYQRGGTVVPRQERVRRSTECMRGDPFTLYVALSPQGTAEGDLFLDDGQSFDYQTKARYLHRQFTFAGNTLTASSADPKGSFDTPAWLERVVILGAGKPAAVILRPADGPETRLDFHHEAETSVLTLRKPGVPIGADWAIVLR
SIO_010081: GANAB
subclass of: SO_0000673
so part of: GANAB
location: complement(join(220592..220701,220802..220902,220990..221102,221194..221307,221403..221477,221608..221684,221811..221875,222805..223048,223141..223242,223670..223766,223889..224032,224470..224549,224640..224766,224866..225101,226465..226618,226693..226873,227004..227100,227199..227283,227415..227514,227907..227972,228353..228532,228621..228748,229006..229114,229227..229331,229987..230006))
location: region:220592-230006:-1
so has part: feature:229987-230006:-1:exon
so has part: feature:229227-229331:-1:exon
so has part: feature:229006-229114:-1:exon
so has part: feature:228621-228748:-1:exon
so has part: feature:228353-228532:-1:exon
so has part: feature:227907-227972:-1:exon
so has part: feature:227415-227514:-1:exon
so has part: feature:227199-227283:-1:exon
so has part: feature:227004-227100:-1:exon
so has part: feature:226693-226873:-1:exon
so has part: feature:226465-226618:-1:exon
so has part: feature:224866-225101:-1:exon
so has part: feature:224640-224766:-1:exon
so has part: feature:224470-224549:-1:exon
so has part: feature:223889-224032:-1:exon
so has part: feature:223670-223766:-1:exon
so has part: feature:223141-223242:-1:exon
so has part: feature:222805-223048:-1:exon
so has part: feature:221811-221875:-1:exon
so has part: feature:221608-221684:-1:exon
so has part: feature:221403-221477:-1:exon
so has part: feature:221194-221307:-1:exon
so has part: feature:220990-221102:-1:exon
so has part: feature:220802-220902:-1:exon
so has part: feature:220592-220701:-1:exon

XP_054039947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229987-230006:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:229227-229331:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229006-229114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:228621-228748:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228353-228532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227907-227972:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227415-227514:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227199-227283:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227004-227100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:226693-226873:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:226465-226618:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:224866-225101:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:224640-224766:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:224470-224549:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:223889-224032:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:223670-223766:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:223141-223242:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:222805-223048:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:221811-221875:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:221608-221684:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:221403-221477:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:221194-221307:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:220990-221102:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:220802-220902:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:220592-220701:-1:exon

ZBTB3
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: ZBTB3
note: zinc finger and BTB domain containing 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 230472..232870
location: region:230472-232870:1
so has part: feature:230472-232870:1:exon
subclass of: SO_0000010

128901797
type: Gene
SIO_000068: ncbigene

position:230472:1
position: 230472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232870:1
position: 232870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230472-232870:1:exon

ZBTB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: ZBTB3
product: zinc finger and BTB domain containing 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_054183945.1
SIO_010081: ZBTB3
subclass of: SO_0000673
so part of: ZBTB3
location: join(230472..230623,231661..232870)
location: region:230472-232870:1
so has part: feature:230472-230623:1:exon
so has part: feature:231661-232870:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230472-230623:1:exon

position:230623:1
position: 230623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:231661-232870:1:exon

position:231661:1
position: 231661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZBTB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: ZBTB3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 3
translation: MEFPEHSRQLLRGLREQRAQGFLCDCTVLVGSSPFPAHRAVLAACSAFFHMCYAERLDKGDLVCLNSEIVTPPAFGLLLEFMYEGRLALAATPLEDVLAAASYLHMNDVVKLCKKKLQARVPAEADSTKREEEEEEEEEDTPASPPAAPQQPPPTPPATPLSPPRPSPPSWGCRGAGCPLPEPPVARGDVADTTQPGMEGDWPRAAPAELPHPSPSSSTEVTPRIPFPGAAELPAPGGLCASPWATAAPGGLLPTAVKVEAIVISDEEPEAGARRPTGIFPGPARGPQPAAGESLPFGLPALREPLFLPPLEGRGGFGIFTEEAPTCPTCGKTFSCSYTLRRHATVHTRERPYECRHCLRSYTQSGDLYRHIRKAHSHGPPTRAPRAAAGATTSDNPP
SIO_010081: ZBTB3
subclass of: SO_0000673
so part of: ZBTB3
location: 231673..232870
location: region:231673-232870:1
so has part: feature:231673-232870:1:exon

XP_054039920.1
type: Protein
SIO_000068: ncbiprotein

position:231673:1
position: 231673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231673-232870:1:exon

RCE1
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: RCE1
note: Ras converting CAAX endopeptidase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(233793..238488)
location: region:233793-238488:-1
so has part: feature:233793-238488:-1:exon
subclass of: SO_0000010

128901809
type: Gene
SIO_000068: ncbigene

position:233793:-1
position: 233793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238488:-1
position: 238488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233793-238488:-1:exon

RCE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: RCE1
product: Ras converting CAAX endopeptidase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_054183965.1
SIO_010081: RCE1
subclass of: SO_0000673
so part of: RCE1
location: complement(join(233793..234120,234209..234271,234834..234905,235883..236052,236687..236764,236861..236944,237058..237159,238243..238488))
location: region:233793-238488:-1
so has part: feature:238243-238488:-1:exon
so has part: feature:237058-237159:-1:exon
so has part: feature:236861-236944:-1:exon
so has part: feature:236687-236764:-1:exon
so has part: feature:235883-236052:-1:exon
so has part: feature:234834-234905:-1:exon
so has part: feature:234209-234271:-1:exon
so has part: feature:233793-234120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238243-238488:-1:exon

position:238243:-1
position: 238243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:237058-237159:-1:exon

position:237058:-1
position: 237058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237159:-1
position: 237159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:236861-236944:-1:exon

position:236861:-1
position: 236861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236944:-1
position: 236944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:236687-236764:-1:exon

position:236687:-1
position: 236687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236764:-1
position: 236764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:235883-236052:-1:exon

position:235883:-1
position: 235883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236052:-1
position: 236052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:234834-234905:-1:exon

position:234834:-1
position: 234834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234905:-1
position: 234905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:234209-234271:-1:exon

position:234209:-1
position: 234209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234271:-1
position: 234271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:233793-234120:-1:exon

position:234120:-1
position: 234120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RCE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: RCE1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(233886..233888),aa:OTHER)
product: LOW QUALITY PROTEIN: CAAX prenyl protease 2
translation: MAVSEAAGGSSWAAAGPGRAGPGPGGAPGAAPGGGGPASHTAAGAGPGPCWAAVLACLSLACSYVGSLYVWGSPLPRDHPSVIKRRFTSVLVVSGLSPAFVWLXKELSGIKLDTPLPALLGLRLEGLVPATLLPLLLTMILFLGPLMQLFMDCPWRWLDGVRVALTPRWWALCLGDVRWLRNQVVAPLTEELVFRACMMPILVPCTGPGPAVLACPLFFGVAHFHHVIEQLRFRQGSVGSIFMSAAFQFSYTAVFGAYTAFIFLRTGHLAGXVLCHSFCNSMGFPAVGAALEHPRRRALLPCYLLGVFLFLLLLHPLTEPTFFGGAPACAQRGPPLPGAPPACSXPGRGAPGPGYPPPPAPRFYRCRHTELYFCD
SIO_010081: RCE1
subclass of: SO_0000673
so part of: RCE1
location: complement(join(233793..234120,234209..234271,234834..234905,235883..236052,236687..236764,236861..236944,237058..237159,238243..238473))
location: region:233793-238473:-1
so has part: feature:238243-238473:-1:exon
so has part: feature:237058-237159:-1:exon
so has part: feature:236861-236944:-1:exon
so has part: feature:236687-236764:-1:exon
so has part: feature:235883-236052:-1:exon
so has part: feature:234834-234905:-1:exon
so has part: feature:234209-234271:-1:exon
so has part: feature:233793-234120:-1:exon

XP_054039940.1
type: Protein
SIO_000068: ncbiprotein

position:238473:-1
position: 238473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238243-238473:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237058-237159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:236861-236944:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236687-236764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235883-236052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234834-234905:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:234209-234271:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233793-234120:-1:exon

SPTBN2
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: SPTBN2
note: spectrin beta, non-erythrocytic 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 242220..273731
location: region:242220-273731:1
so has part: feature:242220-273731:1:exon
subclass of: SO_0000010

128901799
type: Gene
SIO_000068: ncbigene

position:242220:1
position: 242220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273731:1
position: 273731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242220-273731:1:exon

SPTBN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: SPTBN2
product: spectrin beta, non-erythrocytic 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
transcript id: XM_054183946.1
SIO_010081: SPTBN2
subclass of: SO_0000673
so part of: SPTBN2
location: join(242220..242228,244249..244429,248928..249079,250671..250844,251692..251783,251901..251981,252201..252316,252430..252542,253311..253498,253584..253701,254241..254399,255245..255547,255658..255811,257198..258068,258182..258319,258978..259734,259840..260042,260115..260205,261072..261218,261300..261563,262148..262372,263085..263174,263647..263901,263995..264125,265017..265221,265758..266132,267635..267879,268816..268954,269485..269569,269681..269877,270111..270272,270718..270777,271068..271147,271970..272146,272526..272568,273409..273731)
location: region:242220-273731:1
so has part: feature:242220-242228:1:exon
so has part: feature:244249-244429:1:exon
so has part: feature:248928-249079:1:exon
so has part: feature:250671-250844:1:exon
so has part: feature:251692-251783:1:exon
so has part: feature:251901-251981:1:exon
so has part: feature:252201-252316:1:exon
so has part: feature:252430-252542:1:exon
so has part: feature:253311-253498:1:exon
so has part: feature:253584-253701:1:exon
so has part: feature:254241-254399:1:exon
so has part: feature:255245-255547:1:exon
so has part: feature:255658-255811:1:exon
so has part: feature:257198-258068:1:exon
so has part: feature:258182-258319:1:exon
so has part: feature:258978-259734:1:exon
so has part: feature:259840-260042:1:exon
so has part: feature:260115-260205:1:exon
so has part: feature:261072-261218:1:exon
so has part: feature:261300-261563:1:exon
so has part: feature:262148-262372:1:exon
so has part: feature:263085-263174:1:exon
so has part: feature:263647-263901:1:exon
so has part: feature:263995-264125:1:exon
so has part: feature:265017-265221:1:exon
so has part: feature:265758-266132:1:exon
so has part: feature:267635-267879:1:exon
so has part: feature:268816-268954:1:exon
so has part: feature:269485-269569:1:exon
so has part: feature:269681-269877:1:exon
so has part: feature:270111-270272:1:exon
so has part: feature:270718-270777:1:exon
so has part: feature:271068-271147:1:exon
so has part: feature:271970-272146:1:exon
so has part: feature:272526-272568:1:exon
so has part: feature:273409-273731:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:242220-242228:1:exon

position:242228:1
position: 242228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:244249-244429:1:exon

position:244249:1
position: 244249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244429:1
position: 244429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:248928-249079:1:exon

position:248928:1
position: 248928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249079:1
position: 249079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:250671-250844:1:exon

position:250671:1
position: 250671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250844:1
position: 250844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:251692-251783:1:exon

position:251692:1
position: 251692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251783:1
position: 251783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:251901-251981:1:exon

position:251901:1
position: 251901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251981:1
position: 251981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:252201-252316:1:exon

position:252201:1
position: 252201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252316:1
position: 252316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:252430-252542:1:exon

position:252430:1
position: 252430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252542:1
position: 252542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:253311-253498:1:exon

position:253311:1
position: 253311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253498:1
position: 253498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:253584-253701:1:exon

position:253584:1
position: 253584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253701:1
position: 253701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:254241-254399:1:exon

position:254241:1
position: 254241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254399:1
position: 254399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:255245-255547:1:exon

position:255245:1
position: 255245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255547:1
position: 255547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:255658-255811:1:exon

position:255658:1
position: 255658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255811:1
position: 255811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:257198-258068:1:exon

position:257198:1
position: 257198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258068:1
position: 258068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:258182-258319:1:exon

position:258182:1
position: 258182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258319:1
position: 258319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:258978-259734:1:exon

position:258978:1
position: 258978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259734:1
position: 259734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:259840-260042:1:exon

position:259840:1
position: 259840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260042:1
position: 260042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:260115-260205:1:exon

position:260115:1
position: 260115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260205:1
position: 260205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:261072-261218:1:exon

position:261072:1
position: 261072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261218:1
position: 261218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:261300-261563:1:exon

position:261300:1
position: 261300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261563:1
position: 261563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:262148-262372:1:exon

position:262148:1
position: 262148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262372:1
position: 262372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:263085-263174:1:exon

position:263085:1
position: 263085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263174:1
position: 263174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:263647-263901:1:exon

position:263647:1
position: 263647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263901:1
position: 263901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:263995-264125:1:exon

position:263995:1
position: 263995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264125:1
position: 264125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:265017-265221:1:exon

position:265017:1
position: 265017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265221:1
position: 265221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:265758-266132:1:exon

position:265758:1
position: 265758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266132:1
position: 266132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:267635-267879:1:exon

position:267635:1
position: 267635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267879:1
position: 267879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:268816-268954:1:exon

position:268816:1
position: 268816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268954:1
position: 268954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:269485-269569:1:exon

position:269485:1
position: 269485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269569:1
position: 269569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:269681-269877:1:exon

position:269681:1
position: 269681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269877:1
position: 269877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:270111-270272:1:exon

position:270111:1
position: 270111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270272:1
position: 270272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:270718-270777:1:exon

position:270718:1
position: 270718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270777:1
position: 270777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:271068-271147:1:exon

position:271068:1
position: 271068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271147:1
position: 271147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:271970-272146:1:exon

position:271970:1
position: 271970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272146:1
position: 272146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:272526-272568:1:exon

position:272526:1
position: 272526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272568:1
position: 272568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:273409-273731:1:exon

position:273409:1
position: 273409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPTBN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: SPTBN2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 2
translation: MATVSPPPRATMLSPPAYDSLELQRQYGDVNNRWDGGEEEEEEGDREGSSARRFERSRIKALADEREAVQKKTFTKWVNSHLARGTCRLGDLYSDLRDGRMLLRLLEVLSGEQLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIIHKHRPDLVDMEALRRCNAHYNLQSAFNLAERELGLTKLLDPEDVNVDQPDEKSIITYVATFYHYFSKMKALAVEGKRVGKVLDAAREAEELVGKYEELAGELLGWIEQTILTLNDRHLANALPGVQNQLQAFNTYRTVEKPPKFMEKGNLEVLLFTVQSRMRANNQKVYVPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLEQLAARFDRKAAMRETWLSENQRLVAQDNFGTDMSGVEAAVRKHEAIETDIVAYSERVQAVSAVAAELEAERYHDIRRVLTRRDNVGRLWDFLRQLLAARRERLLLHLELQKMLQDLGHLTDWMEEMKGRLRSQDLGKHLREVDDLLQLHGLVEADIAAQAERVRAVGAAAQRFAGDGQGYQPCEPATVRERVATLELRYRELVELAGQRRARLEESRRLWKFFWDTGEEEAWMREQERLLSSEDVGRDLTSSLRLLSQHDAFRGELSGRAGPLEQALARGRDLVAEGRLGATEVAERVREMEGRWRALGELAAERERRLREAAGFFQFQAEAADMETWLEDALRLASSPELGHDEYSTRSLARQHREVQEEVRNHRPAIDALQEQAGALPPAFADAPGVAGRLPELERRYQELASRAERRRQDLQDALSFYTMRSEADACGLWVGEKEQWLHAMDVPEKLEDLEVVQQRFETLEPEMNNLASRVAAVNRIAHQLLATDQRNQESIRATREQLNARWDRFRALADQKKEALTSALNIQNFHLECNETTSWMREKTKVIESTQGLGNDLAGVMALQRKLSGMERDLEAIQGKVRDLRAEGEKLAAEHPEQAPAIPARLSAVEAVWDELRSSLRRREESLGEASKLQGFLRDLAAFQAWLSRTQTAVASEDVPATLAEAERLLSQHESIRKEIAHYGDDYRNTRAVGREVTQGQTDAQHVFLHQRLEALDTGWEELGRMWENRHHLLSQAFAFQVFLRDSKQVEGVLSTQEYALSHTEMPGTLPAAEASVKKHEDFMATMEANGERVQGLVATGRKLVAEGSLHAEKVQETVDSVESRHRRNRETAQELLGRLRDNWELQRFLQDGQELTLWINEKMLTAQDVSYEEARNLHTKWQKHQAFAAELAANKGWLEKMEKEGQQLASAKPELGTVVTEKLAALRGLWEELESTTRTKARRLFDANRAELCAQSCAAMGGWLAGVSAQLRSDDYGKDLTSVNILLKKQQMLETQTAVREKEVEAMRAQAQALSPEDGGAAEVRGRVRAVEQQFLGLREPLRERRRRLVASKEEHQFHRDLEDEILWVQERRALAVSTDHGKDLPSVQLLIKKNQTLQKELQGHERRVEELLGRGGGAGGPAERVRELREAWRELRRQTELRHRRLELAQAAQQFYCDAAEAEAWMGEQELHMMAQEKAKDELSAQAMVSKHLVLEQALRDYAHTIQQLSAQSRDMVASGHPESERLRLRQAQVDKLYAGLRELAEERRAALQEHQRLCQLRRDLDDLEQWVSEREVVAASHELGQDYEHVTMLRDKFREFSRDTSSIGQERVDAVNALADALIAAGHSENATVAEWKDGLNEAWADLLELMDTRSQMLAASYELHRFFHDARETLAQVQHKQQQLPEEVGRDLNTAEAMQRMHSAYEHDIQALSAQVRQVQEDAGRLAKAYAGEKAADIRRHEQAVSQAWAELRGSSQGRRRLLLDTVDKFRFLRAVRDLLLWMDGVRLQIEGQERPRDVSSADLVIKNHQSIKAEVEARADSFDACVAMGTALLHKGHYAADKISEKLSQL…
SIO_010081: SPTBN2
subclass of: SO_0000673
so part of: SPTBN2
location: join(242220..242228,244249..244429,248928..249079,250671..250844,251692..251783,251901..251981,252201..252316,252430..252542,253311..253498,253584..253701,254241..254399,255245..255547,255658..255811,257198..258068,258182..258319,258978..259734,259840..260042,260115..260205,261072..261218,261300..261563,262148..262372,263085..263174,263647..263901,263995..264125,265017..265221,265758..266132,267635..267879,268816..268954,269485..269569,269681..269877,270111..270272,270718..270777,271068..271147,271970..272146,272526..272568,273409..273644)
location: region:242220-273644:1
so has part: feature:242220-242228:1:exon
so has part: feature:244249-244429:1:exon
so has part: feature:248928-249079:1:exon
so has part: feature:250671-250844:1:exon
so has part: feature:251692-251783:1:exon
so has part: feature:251901-251981:1:exon
so has part: feature:252201-252316:1:exon
so has part: feature:252430-252542:1:exon
so has part: feature:253311-253498:1:exon
so has part: feature:253584-253701:1:exon
so has part: feature:254241-254399:1:exon
so has part: feature:255245-255547:1:exon
so has part: feature:255658-255811:1:exon
so has part: feature:257198-258068:1:exon
so has part: feature:258182-258319:1:exon
so has part: feature:258978-259734:1:exon
so has part: feature:259840-260042:1:exon
so has part: feature:260115-260205:1:exon
so has part: feature:261072-261218:1:exon
so has part: feature:261300-261563:1:exon
so has part: feature:262148-262372:1:exon
so has part: feature:263085-263174:1:exon
so has part: feature:263647-263901:1:exon
so has part: feature:263995-264125:1:exon
so has part: feature:265017-265221:1:exon
so has part: feature:265758-266132:1:exon
so has part: feature:267635-267879:1:exon
so has part: feature:268816-268954:1:exon
so has part: feature:269485-269569:1:exon
so has part: feature:269681-269877:1:exon
so has part: feature:270111-270272:1:exon
so has part: feature:270718-270777:1:exon
so has part: feature:271068-271147:1:exon
so has part: feature:271970-272146:1:exon
so has part: feature:272526-272568:1:exon
so has part: feature:273409-273644:1:exon

XP_054039921.1
type: Protein
SIO_000068: ncbiprotein

position:273644:1
position: 273644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242220-242228:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:244249-244429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248928-249079:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250671-250844:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251692-251783:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251901-251981:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:252201-252316:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252430-252542:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253311-253498:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:253584-253701:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:254241-254399:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:255245-255547:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255658-255811:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:257198-258068:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:258182-258319:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:258978-259734:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:259840-260042:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:260115-260205:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:261072-261218:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:261300-261563:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:262148-262372:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:263085-263174:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:263647-263901:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:263995-264125:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:265017-265221:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:265758-266132:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:267635-267879:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:268816-268954:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:269485-269569:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:269681-269877:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:270111-270272:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:270718-270777:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:271068-271147:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:271970-272146:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:272526-272568:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:273409-273644:1:exon

TUT1
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: TUT1
note: terminal uridylyl transferase 1, U6 snRNA-specific; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 275268..281577
location: region:275268-281577:1
so has part: feature:275268-281577:1:exon
subclass of: SO_0000010

128901800
type: Gene
SIO_000068: ncbigene

position:275268:1
position: 275268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281577:1
position: 281577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275268-281577:1:exon

TUT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: TUT1
product: terminal uridylyl transferase 1, U6 snRNA-specific
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_054183947.1
SIO_010081: TUT1
subclass of: SO_0000673
so part of: TUT1
location: join(275268..275416,276020..276170,276989..278018,278127..278317,278403..278624,279192..279306,279453..279778,279869..279978,280108..280209,280293..280406,280502..281417,281476..281577)
location: region:275268-281577:1
so has part: feature:275268-275416:1:exon
so has part: feature:276020-276170:1:exon
so has part: feature:276989-278018:1:exon
so has part: feature:278127-278317:1:exon
so has part: feature:278403-278624:1:exon
so has part: feature:279192-279306:1:exon
so has part: feature:279453-279778:1:exon
so has part: feature:279869-279978:1:exon
so has part: feature:280108-280209:1:exon
so has part: feature:280293-280406:1:exon
so has part: feature:280502-281417:1:exon
so has part: feature:281476-281577:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275268-275416:1:exon

position:275416:1
position: 275416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:276020-276170:1:exon

position:276020:1
position: 276020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276170:1
position: 276170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:276989-278018:1:exon

position:276989:1
position: 276989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278018:1
position: 278018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:278127-278317:1:exon

position:278127:1
position: 278127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278317:1
position: 278317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:278403-278624:1:exon

position:278403:1
position: 278403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278624:1
position: 278624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:279192-279306:1:exon

position:279192:1
position: 279192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279306:1
position: 279306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:279453-279778:1:exon

position:279453:1
position: 279453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279778:1
position: 279778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:279869-279978:1:exon

position:279869:1
position: 279869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279978:1
position: 279978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:280108-280209:1:exon

position:280108:1
position: 280108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280209:1
position: 280209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:280293-280406:1:exon

position:280293:1
position: 280293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280406:1
position: 280406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:280502-281417:1:exon

position:280502:1
position: 280502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281417:1
position: 281417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:281476-281577:1:exon

position:281476:1
position: 281476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TUT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: TUT1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: speckle targeted PIP5K1A-regulated poly(A) polymerase
translation: MAGTGNGLGPATDADTGPGPAVEAGPGLVLGTGTGSGPATDADTGPEADPGPVAGTSTGSCPATETDTGLETDPSSGPDTDAVPDPLPGAGTVPGLLTDPVADPDVESQPRGGFRCRLCQVSAANRPSLAEHLRGKKHQRLRALRAERRAQEQRSLFVTGFARGTSGAELADYFRTYGDVATVVMDKEKGAYAIVELREAAGRERALAEPQHHLDGHRLRIRPREQKAFVYGPPLRAQPPPGAPRPGPAGAGALAGLGREWGLVDTQMSRLVELLELSEAERRVRHLLVTLFQEVFTEFFPGCAVLPFGSSVNGFDAHGCDLDLLLDLEPTKSLQAAATRDLPASEDSILSDIDLAVTPAPEVLELVATVLRRCVPGVRRVRAVPTARRPVVKFCHKQSGLRGDISIDNRLALLNTRFLQLCAEADERVRPLVYAVRLWAKQQGLAGNPSGGGPLLNNYALTLLVLFFLQTRSPSVLPHRPSLFSLQGTRDRAVVGGWDCSFPRDAASLEPSTNTESPGSLLAQFFHVLGDFDLAGQVISLREGRALPLPSPDVPEGLKLGPFNLQDPFELSHNVAANVTRKTAARFGHCCRAAAKYCRSLQYCRKSSKGRAWGLTRLFQPGAVEPGAGNAGVFLISIPLDVAGGCRQLAGRGPWFWEVCAAIAFVLRDVLKCDCAAGKTPRASNEECGIPEDSAPSEEDTEPDVEETAVVGSKRHRSEGDKRLRAPGWEETASQRPRGGGVANWSCAVRHRVWTGRRRVRRQLRHGDDAEEPEGDSLELEQKVSETIVGRGAAEGTPQPLLQFEASARPATTRRQTRVLLRLSFLPGAVRRRLGWGPAGGTEPQNGGDVAGGSVS
SIO_010081: TUT1
subclass of: SO_0000673
so part of: TUT1
location: join(277643..278018,278127..278317,278403..278624,279192..279306,279453..279778,279869..279978,280108..280209,280293..280406,280502..281417,281476..281577)
location: region:277643-281577:1
so has part: feature:277643-278018:1:exon
so has part: feature:278127-278317:1:exon
so has part: feature:278403-278624:1:exon
so has part: feature:279192-279306:1:exon
so has part: feature:279453-279778:1:exon
so has part: feature:279869-279978:1:exon
so has part: feature:280108-280209:1:exon
so has part: feature:280293-280406:1:exon
so has part: feature:280502-281417:1:exon
so has part: feature:281476-281577:1:exon

XP_054039922.1
type: Protein
SIO_000068: ncbiprotein

position:277643:1
position: 277643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277643-278018:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278127-278317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278403-278624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279192-279306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279453-279778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279869-279978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280108-280209:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280293-280406:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280502-281417:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281476-281577:1:exon

LOC128901834
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: LOC128901834
note: U2 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 283023..283213
location: region:283023-283213:1
so has part: feature:283023-283213:1:exon
subclass of: SO_0000623

128901834
type: Gene
SIO_000068: ncbigene

position:283023:1
position: 283023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283213:1
position: 283213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283023-283213:1:exon

LOC128901834
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 75485
nc RNA class: snRNA
gene: LOC128901834
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_008463534.1
SIO_010081: LOC128901834
subclass of: SO_0000673
so part of: LOC128901834
location: 283023..283213
location: region:283023-283213:1
so has part: feature:283023-283213:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:283023-283213:1:exon

LOC128901837
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: LOC128901837
note: U2 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(283820..284010)
location: region:283820-284010:-1
so has part: feature:283820-284010:-1:exon
subclass of: SO_0000623

128901837
type: Gene
SIO_000068: ncbigene

position:283820:-1
position: 283820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284010:-1
position: 284010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283820-284010:-1:exon

LOC128901837
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 75485
nc RNA class: snRNA
gene: LOC128901837
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_008463537.1
SIO_010081: LOC128901837
subclass of: SO_0000673
so part of: LOC128901837
location: complement(283820..284010)
location: region:283820-284010:-1
so has part: feature:283820-284010:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:283820-284010:-1:exon

LOC128901839
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: LOC128901839
note: U2 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(291263..291453)
location: region:291263-291453:-1
so has part: feature:291263-291453:-1:exon
subclass of: SO_0000623

128901839
type: Gene
SIO_000068: ncbigene

position:291263:-1
position: 291263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291453:-1
position: 291453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291263-291453:-1:exon

LOC128901839
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 75485
nc RNA class: snRNA
gene: LOC128901839
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_008463539.1
SIO_010081: LOC128901839
subclass of: SO_0000673
so part of: LOC128901839
location: complement(291263..291453)
location: region:291263-291453:-1
so has part: feature:291263-291453:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291263-291453:-1:exon

TMEM223
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: TMEM223
note: transmembrane protein 223; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(293003..294337)
location: region:293003-294337:-1
so has part: feature:293003-294337:-1:exon
subclass of: SO_0000010

128901810
type: Gene
SIO_000068: ncbigene

position:293003:-1
position: 293003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294337:-1
position: 294337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293003-294337:-1:exon

TMEM223
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: TMEM223
product: transmembrane protein 223
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 5 bases in 5 codons
transcript id: XM_054183967.1
SIO_010081: TMEM223
subclass of: SO_0000673
so part of: TMEM223
location: complement(join(293003..293400,294075..294337))
location: region:293003-294337:-1
so has part: feature:294075-294337:-1:exon
so has part: feature:293003-293400:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294075-294337:-1:exon

position:294075:-1
position: 294075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:293003-293400:-1:exon

position:293400:-1
position: 293400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM223
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: TMEM223
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 5 bases in 5 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transmembrane protein 223
translation: MAAAGARAAAAALEVAVPRDVVLFRHERGRFFRLAGFFCAGQGLFWTYLAHFAFTALRPTAGPGPDDPLRPRDNKWRLGFTASCLTLGSLIVAAGILFPLRAVRRVTLLRGGAEVAISTHGPLGLGRGPTLTVPLRHVSCRAHRSEVPAALPLKVKGRPFFFLMDKGGQLCNPRLFDLTVGAYRKL
SIO_010081: TMEM223
subclass of: SO_0000673
so part of: TMEM223
location: complement(join(293098..293400,294075..294337))
location: region:293098-294337:-1
so has part: feature:294075-294337:-1:exon
so has part: feature:293098-293400:-1:exon

XP_054039942.1
type: Protein
SIO_000068: ncbiprotein

position:293098:-1
position: 293098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294075-294337:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293098-293400:-1:exon

LOC128901820
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: LOC128901820
note: uncharacterized LOC128901820; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(294756..295909)
location: region:294756-295909:-1
so has part: feature:294756-295909:-1:exon
subclass of: SO_0000011

128901820
type: Gene
SIO_000068: ncbigene

position:294756:-1
position: 294756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295909:-1
position: 295909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294756-295909:-1:exon

LOC128901820
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 75485
nc RNA class: lncRNA
gene: LOC128901820
product: uncharacterized LOC128901820
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008463528.1
SIO_010081: LOC128901820
subclass of: SO_0000673
so part of: LOC128901820
location: complement(join(294756..294822,294931..295115,295831..295909))
location: region:294756-295909:-1
so has part: feature:295831-295909:-1:exon
so has part: feature:294931-295115:-1:exon
so has part: feature:294756-294822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295831-295909:-1:exon

position:295831:-1
position: 295831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294931-295115:-1:exon

position:294931:-1
position: 294931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295115:-1
position: 295115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:294756-294822:-1:exon

position:294822:-1
position: 294822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NXF1
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: NXF1
note: nuclear RNA export factor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(296752..302997)
location: region:296752-302997:-1
so has part: feature:296752-302997:-1:exon
subclass of: SO_0000010

128901819
type: Gene
SIO_000068: ncbigene

position:296752:-1
position: 296752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302997:-1
position: 302997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296752-302997:-1:exon

NXF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: NXF1
product: nuclear RNA export factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_054183979.1
SIO_010081: NXF1
subclass of: SO_0000673
so part of: NXF1
location: complement(join(296752..296827,296962..297030,297475..297511,298900..299009,299107..299214,299865..299953,300057..300126,300213..300398,300546..300629,301549..301678,301798..301993,302916..302997))
location: region:296752-302997:-1
so has part: feature:302916-302997:-1:exon
so has part: feature:301798-301993:-1:exon
so has part: feature:301549-301678:-1:exon
so has part: feature:300546-300629:-1:exon
so has part: feature:300213-300398:-1:exon
so has part: feature:300057-300126:-1:exon
so has part: feature:299865-299953:-1:exon
so has part: feature:299107-299214:-1:exon
so has part: feature:298900-299009:-1:exon
so has part: feature:297475-297511:-1:exon
so has part: feature:296962-297030:-1:exon
so has part: feature:296752-296827:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:302916-302997:-1:exon

position:302916:-1
position: 302916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301798-301993:-1:exon

position:301798:-1
position: 301798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301993:-1
position: 301993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:301549-301678:-1:exon

position:301549:-1
position: 301549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301678:-1
position: 301678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:300546-300629:-1:exon

position:300546:-1
position: 300546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300629:-1
position: 300629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:300213-300398:-1:exon

position:300213:-1
position: 300213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300398:-1
position: 300398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:300057-300126:-1:exon

position:300057:-1
position: 300057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300126:-1
position: 300126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:299865-299953:-1:exon

position:299865:-1
position: 299865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299953:-1
position: 299953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:299107-299214:-1:exon

position:299107:-1
position: 299107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299214:-1
position: 299214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:298900-299009:-1:exon

position:298900:-1
position: 298900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299009:-1
position: 299009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:297475-297511:-1:exon

position:297475:-1
position: 297475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297511:-1
position: 297511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:296962-297030:-1:exon

position:296962:-1
position: 296962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297030:-1
position: 297030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:296752-296827:-1:exon

position:296827:-1
position: 296827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NXF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: NXF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear RNA export factor 1 isoform X2
translation: MAEEGKGGYSEHDDRVGGRSFSGRRKKGRGPFRGKMYSEMNHRSRSRGGPGLRARLEEDDGDVPMSEAHDGPRSRYLPYGPRPNRSTNIHITVKRDLPTPERSGGTSRDGGRRNWFKITIPYGKKYDKSWLLSSIQNLCSVPFTPVEFHYDHNRAQFYVEDATTASALKQVSRKITDRDNYKVVIIINSSAPPQSLQNELKPEEIEQLKLCMSKRYDGSQRALDLKSLRVDPDLVSQSIDVVLNQRSCMLVVLRIIEDNIPELQSLNLSSNKLYRLDDLSELAQKAAGLKILDLSRNELKSDRELDKVKGLKLEELWLDGNPLCDAFRDQSTYISSVRERFPKLLRLDGHELPPPIAFDVEAPTTLPPCKGSYFASDDLKVLVLRFLQQ
SIO_010081: NXF1
subclass of: SO_0000673
so part of: NXF1
location: complement(join(296768..296827,296962..297030,297475..297511,298900..299009,299107..299214,299865..299953,300057..300126,300213..300398,300546..300629,301549..301678,301798..301993,302916..302946))
location: region:296768-302946:-1
so has part: feature:302916-302946:-1:exon
so has part: feature:301798-301993:-1:exon
so has part: feature:301549-301678:-1:exon
so has part: feature:300546-300629:-1:exon
so has part: feature:300213-300398:-1:exon
so has part: feature:300057-300126:-1:exon
so has part: feature:299865-299953:-1:exon
so has part: feature:299107-299214:-1:exon
so has part: feature:298900-299009:-1:exon
so has part: feature:297475-297511:-1:exon
so has part: feature:296962-297030:-1:exon
so has part: feature:296768-296827:-1:exon

XP_054039954.1
type: Protein
SIO_000068: ncbiprotein

position:296768:-1
position: 296768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302946:-1
position: 302946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302916-302946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301798-301993:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301549-301678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300546-300629:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300213-300398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300057-300126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299865-299953:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:299107-299214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:298900-299009:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:297475-297511:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:296962-297030:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:296768-296827:-1:exon

NXF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: NXF1
product: nuclear RNA export factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_054183978.1
SIO_010081: NXF1
subclass of: SO_0000673
so part of: NXF1
location: complement(join(297714..299009,299107..299214,299865..299953,300057..300126,300213..300398,300546..300629,301549..301678,301798..301993,302916..302997))
location: region:297714-302997:-1
so has part: feature:302916-302997:-1:exon
so has part: feature:301798-301993:-1:exon
so has part: feature:301549-301678:-1:exon
so has part: feature:300546-300629:-1:exon
so has part: feature:300213-300398:-1:exon
so has part: feature:300057-300126:-1:exon
so has part: feature:299865-299953:-1:exon
so has part: feature:299107-299214:-1:exon
so has part: feature:297714-299009:-1:exon

position:297714:-1
position: 297714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302916-302997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301798-301993:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301549-301678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300546-300629:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300213-300398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300057-300126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299865-299953:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:299107-299214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:297714-299009:-1:exon

NXF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: NXF1
product: nuclear RNA export factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_054183980.1
SIO_010081: NXF1
subclass of: SO_0000673
so part of: NXF1
location: complement(join(297717..298396,298900..299009,299107..299214,299865..299953,300057..300126,300213..300398,300546..300629,301549..301678,301798..301993,302916..302997))
location: region:297717-302997:-1
so has part: feature:302916-302997:-1:exon
so has part: feature:301798-301993:-1:exon
so has part: feature:301549-301678:-1:exon
so has part: feature:300546-300629:-1:exon
so has part: feature:300213-300398:-1:exon
so has part: feature:300057-300126:-1:exon
so has part: feature:299865-299953:-1:exon
so has part: feature:299107-299214:-1:exon
so has part: feature:298900-299009:-1:exon
so has part: feature:297717-298396:-1:exon

position:297717:-1
position: 297717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302916-302997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301798-301993:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301549-301678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300546-300629:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300213-300398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300057-300126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299865-299953:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:299107-299214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:298900-299009:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:297717-298396:-1:exon

position:298396:-1
position: 298396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NXF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: NXF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear RNA export factor 1 isoform X3
translation: MAEEGKGGYSEHDDRVGGRSFSGRRKKGRGPFRGKMYSEMNHRSRSRGGPGLRARLEEDDGDVPMSEAHDGPRSRYLPYGPRPNRSTNIHITVKRDLPTPERSGGTSRDGGRRNWFKITIPYGKKYDKSWLLSSIQNLCSVPFTPVEFHYDHNRAQFYVEDATTASALKQVSRKITDRDNYKVVIIINSSAPPQSLQNELKPEEIEQLKLCMSKRYDGSQRALDLKSLRVDPDLVSQSIDVVLNQRSCMLVVLRIIEDNIPELQSLNLSSNKLYRLDDLSELAQKAAGLKILDLSRNELKSDRELDKVKGLKLEELWLDGNPLCDAFRDQSTYIRLYRAAPSLPRARVWPSTMAG
SIO_010081: NXF1
subclass of: SO_0000673
so part of: NXF1
location: complement(join(298333..298396,298900..299009,299107..299214,299865..299953,300057..300126,300213..300398,300546..300629,301549..301678,301798..301993,302916..302946))
location: region:298333-302946:-1
so has part: feature:302916-302946:-1:exon
so has part: feature:301798-301993:-1:exon
so has part: feature:301549-301678:-1:exon
so has part: feature:300546-300629:-1:exon
so has part: feature:300213-300398:-1:exon
so has part: feature:300057-300126:-1:exon
so has part: feature:299865-299953:-1:exon
so has part: feature:299107-299214:-1:exon
so has part: feature:298900-299009:-1:exon
so has part: feature:298333-298396:-1:exon

XP_054039955.1
type: Protein
SIO_000068: ncbiprotein

position:298333:-1
position: 298333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302916-302946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301798-301993:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301549-301678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300546-300629:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300213-300398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300057-300126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299865-299953:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:299107-299214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:298900-299009:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:298333-298396:-1:exon

NXF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: NXF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear RNA export factor 1 isoform X1
translation: MAEEGKGGYSEHDDRVGGRSFSGRRKKGRGPFRGKMYSEMNHRSRSRGGPGLRARLEEDDGDVPMSEAHDGPRSRYLPYGPRPNRSTNIHITVKRDLPTPERSGGTSRDGGRRNWFKITIPYGKKYDKSWLLSSIQNLCSVPFTPVEFHYDHNRAQFYVEDATTASALKQVSRKITDRDNYKVVIIINSSAPPQSLQNELKPEEIEQLKLCMSKRYDGSQRALDLKSLRVDPDLVSQSIDVVLNQRSCMLVVLRIIEDNIPELQSLNLSSNKLYRLDDLSELAQKAAGLKILDLSRNELKSDRELDKVKGLKLEELWLDGNPLCDAFRDQSTYIRSVLALGRPQGPVGRPCSAGGNPAGRREAAPPRPPLPQTHTNPLPGAFCSPAPGDPRVPPSPRQPLVVA
SIO_010081: NXF1
subclass of: SO_0000673
so part of: NXF1
location: complement(join(298692..299009,299107..299214,299865..299953,300057..300126,300213..300398,300546..300629,301549..301678,301798..301993,302916..302946))
location: region:298692-302946:-1
so has part: feature:302916-302946:-1:exon
so has part: feature:301798-301993:-1:exon
so has part: feature:301549-301678:-1:exon
so has part: feature:300546-300629:-1:exon
so has part: feature:300213-300398:-1:exon
so has part: feature:300057-300126:-1:exon
so has part: feature:299865-299953:-1:exon
so has part: feature:299107-299214:-1:exon
so has part: feature:298692-299009:-1:exon

XP_054039953.1
type: Protein
SIO_000068: ncbiprotein

position:298692:-1
position: 298692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302916-302946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301798-301993:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301549-301678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300546-300629:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300213-300398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300057-300126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299865-299953:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:299107-299214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:298692-299009:-1:exon

STX5
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: STX5
note: syntaxin 5; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(303123..308342)
location: region:303123-308342:-1
so has part: feature:303123-308342:-1:exon
subclass of: SO_0000010

128901825
type: Gene
SIO_000068: ncbigene

position:303123:-1
position: 303123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308342:-1
position: 308342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303123-308342:-1:exon

STX5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: STX5
product: syntaxin 5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_054183988.1
SIO_010081: STX5
subclass of: SO_0000673
so part of: STX5
location: complement(join(303123..304292,304375..304496,304598..304698,304826..304907,305491..305547,305658..305774,305892..305962,306059..306114,306784..306854,307430..307668,308195..308342))
location: region:303123-308342:-1
so has part: feature:308195-308342:-1:exon
so has part: feature:307430-307668:-1:exon
so has part: feature:306784-306854:-1:exon
so has part: feature:306059-306114:-1:exon
so has part: feature:305892-305962:-1:exon
so has part: feature:305658-305774:-1:exon
so has part: feature:305491-305547:-1:exon
so has part: feature:304826-304907:-1:exon
so has part: feature:304598-304698:-1:exon
so has part: feature:304375-304496:-1:exon
so has part: feature:303123-304292:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:308195-308342:-1:exon

position:308195:-1
position: 308195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:307430-307668:-1:exon

position:307430:-1
position: 307430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307668:-1
position: 307668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:306784-306854:-1:exon

position:306784:-1
position: 306784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306854:-1
position: 306854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:306059-306114:-1:exon

position:306059:-1
position: 306059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306114:-1
position: 306114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:305892-305962:-1:exon

position:305892:-1
position: 305892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305962:-1
position: 305962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:305658-305774:-1:exon

position:305658:-1
position: 305658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305774:-1
position: 305774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:305491-305547:-1:exon

position:305491:-1
position: 305491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305547:-1
position: 305547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:304826-304907:-1:exon

position:304826:-1
position: 304826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304907:-1
position: 304907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:304598-304698:-1:exon

position:304598:-1
position: 304598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304698:-1
position: 304698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:304375-304496:-1:exon

position:304375:-1
position: 304375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304496:-1
position: 304496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:303123-304292:-1:exon

position:304292:-1
position: 304292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STX5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: STX5
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: syntaxin-5
translation: MNARRRHGSRQREQGVYLGPPQTQAVSPPPFAAAPXPPLAGPPPLLPPPPDATMSCRDRTQEFLSACKSLQGRQDGGQLGRAAPGAGRQRSEFSLMAKRIGKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQEMVRARGGQSGRHVQTHSNTVVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREHFSRAPVSALPLAASNLGGSAMLQTEPQRAGTVAIEMDARTSQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDASVEDAQLNVEAAHGEILKYFQSVTSNRWLMVKIFLILIVFFIVFVVFLA
SIO_010081: STX5
subclass of: SO_0000673
so part of: STX5
location: complement(join(304133..304292,304375..304496,304598..304698,304826..304907,305491..305547,305658..305774,305892..305962,306059..306114,306784..306854,307430..307649))
location: region:304133-307649:-1
so has part: feature:307430-307649:-1:exon
so has part: feature:306784-306854:-1:exon
so has part: feature:306059-306114:-1:exon
so has part: feature:305892-305962:-1:exon
so has part: feature:305658-305774:-1:exon
so has part: feature:305491-305547:-1:exon
so has part: feature:304826-304907:-1:exon
so has part: feature:304598-304698:-1:exon
so has part: feature:304375-304496:-1:exon
so has part: feature:304133-304292:-1:exon

XP_054039963.1
type: Protein
SIO_000068: ncbiprotein

position:304133:-1
position: 304133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307649:-1
position: 307649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307430-307649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306784-306854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306059-306114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:305892-305962:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305658-305774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305491-305547:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:304826-304907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304598-304698:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304375-304496:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:304133-304292:-1:exon

LOC128901811
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: LOC128901811
note: uncharacterized LOC128901811; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(308883..309453)
location: region:308883-309453:-1
so has part: feature:308883-309453:-1:exon
subclass of: SO_0000011

128901811
type: Gene
SIO_000068: ncbigene

position:308883:-1
position: 308883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309453:-1
position: 309453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308883-309453:-1:exon

LOC128901811
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 75485
nc RNA class: lncRNA
gene: LOC128901811
product: uncharacterized LOC128901811
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008463526.1
SIO_010081: LOC128901811
subclass of: SO_0000673
so part of: LOC128901811
location: complement(join(308883..309132,309248..309453))
location: region:308883-309453:-1
so has part: feature:309248-309453:-1:exon
so has part: feature:308883-309132:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309248-309453:-1:exon

position:309248:-1
position: 309248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:308883-309132:-1:exon

position:309132:-1
position: 309132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NAA40
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: NAA40
note: N-alpha-acetyltransferase 40, NatD catalytic subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(309747..315644)
location: region:309747-315644:-1
so has part: feature:309747-315644:-1:exon
subclass of: SO_0000010

128901822
type: Gene
SIO_000068: ncbigene

position:309747:-1
position: 309747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315644:-1
position: 315644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309747-315644:-1:exon

NAA40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: NAA40
product: N-alpha-acetyltransferase 40, NatD catalytic subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_054183984.1
SIO_010081: NAA40
subclass of: SO_0000673
so part of: NAA40
location: complement(join(309747..310029,312137..312220,312313..312468,313128..313223,313321..313373,313545..313640,315500..315644))
location: region:309747-315644:-1
so has part: feature:315500-315644:-1:exon
so has part: feature:313545-313640:-1:exon
so has part: feature:313321-313373:-1:exon
so has part: feature:313128-313223:-1:exon
so has part: feature:312313-312468:-1:exon
so has part: feature:312137-312220:-1:exon
so has part: feature:309747-310029:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315500-315644:-1:exon

position:315500:-1
position: 315500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:313545-313640:-1:exon

position:313545:-1
position: 313545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313640:-1
position: 313640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:313321-313373:-1:exon

position:313321:-1
position: 313321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313373:-1
position: 313373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:313128-313223:-1:exon

position:313128:-1
position: 313128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313223:-1
position: 313223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:312313-312468:-1:exon

position:312313:-1
position: 312313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312468:-1
position: 312468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:312137-312220:-1:exon

position:312137:-1
position: 312137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312220:-1
position: 312220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:309747-310029:-1:exon

position:310029:-1
position: 310029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NAA40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: NAA40
product: N-alpha-acetyltransferase 40, NatD catalytic subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_054183983.1
SIO_010081: NAA40
subclass of: SO_0000673
so part of: NAA40
location: complement(join(309747..310029,311947..312024,312137..312220,312313..312468,313128..313223,313321..313373,313545..313640,315500..315644))
location: region:309747-315644:-1
so has part: feature:315500-315644:-1:exon
so has part: feature:313545-313640:-1:exon
so has part: feature:313321-313373:-1:exon
so has part: feature:313128-313223:-1:exon
so has part: feature:312313-312468:-1:exon
so has part: feature:312137-312220:-1:exon
so has part: feature:311947-312024:-1:exon
so has part: feature:309747-310029:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315500-315644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313545-313640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:313321-313373:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313128-313223:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312313-312468:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312137-312220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311947-312024:-1:exon

position:311947:-1
position: 311947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312024:-1
position: 312024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:309747-310029:-1:exon

NAA40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: NAA40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-alpha-acetyltransferase 40 isoform X2
translation: MGRKSSKAKEKKQKRLEERAAMDAVCAKVEAANKLEDPLEAFPVFKKYDRNGLNVSIECKRVSGLEPATLEWAFDLTKANMQTLYEQSEWGWKEREKREELRDDRAWYLIAREPTGPVAFSHFRFDVECGDEVLYCYEVQLESRVRRRGLGKFLLQILQLVANRFEVDAASPSVSGCCGDDSSYEILSRRTKFGESHPLPHPGGGPCGGCCR
SIO_010081: NAA40
subclass of: SO_0000673
so part of: NAA40
location: complement(join(309882..310029,312137..312220,312313..312468,313128..313223,313321..313373,313545..313640,315500..315505))
location: region:309882-315505:-1
so has part: feature:315500-315505:-1:exon
so has part: feature:313545-313640:-1:exon
so has part: feature:313321-313373:-1:exon
so has part: feature:313128-313223:-1:exon
so has part: feature:312313-312468:-1:exon
so has part: feature:312137-312220:-1:exon
so has part: feature:309882-310029:-1:exon

XP_054039959.1
type: Protein
SIO_000068: ncbiprotein

position:309882:-1
position: 309882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315505:-1
position: 315505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315500-315505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313545-313640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:313321-313373:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313128-313223:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312313-312468:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312137-312220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:309882-310029:-1:exon

NAA40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: NAA40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-alpha-acetyltransferase 40 isoform X1
translation: MGRKSSKAKEKKQKRLEERAAMDAVCAKVEAANKLEDPLEAFPVFKKYDRNGLNVSIECKRVSGLEPATLEWAFDLTKANMQTLYEQSEWGWKEREKREELRDDRAWYLIAREPTGPVAFSHFRFDVECGDEVLYCYEVQLESRVRRRGLGKFLLQILQLVANSTQMKKVMLTVFKHNHGAYQFFREALQFEVDAASPSVSGCCGDDSSYEILSRRTKFGESHPLPHPGGGPCGGCCR
SIO_010081: NAA40
subclass of: SO_0000673
so part of: NAA40
location: complement(join(309882..310029,311947..312024,312137..312220,312313..312468,313128..313223,313321..313373,313545..313640,315500..315505))
location: region:309882-315505:-1
so has part: feature:315500-315505:-1:exon
so has part: feature:313545-313640:-1:exon
so has part: feature:313321-313373:-1:exon
so has part: feature:313128-313223:-1:exon
so has part: feature:312313-312468:-1:exon
so has part: feature:312137-312220:-1:exon
so has part: feature:311947-312024:-1:exon
so has part: feature:309882-310029:-1:exon

XP_054039958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315500-315505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313545-313640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:313321-313373:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313128-313223:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312313-312468:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312137-312220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311947-312024:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:309882-310029:-1:exon

RCOR2
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: RCOR2
note: REST corepressor 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 315807..323050
location: region:315807-323050:1
so has part: feature:315807-323050:1:exon
subclass of: SO_0000010

128901801
type: Gene
SIO_000068: ncbigene

position:315807:1
position: 315807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323050:1
position: 323050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315807-323050:1:exon

RCOR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: RCOR2
product: REST corepressor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins
transcript id: XM_054183948.1
SIO_010081: RCOR2
subclass of: SO_0000673
so part of: RCOR2
location: join(315807..315888,317711..317834,318273..318329,318406..318486,319047..319099,319207..319368,320504..320628,320717..320797,321162..321387,321815..321892,322225..322282,322704..322844,322956..323050)
location: region:315807-323050:1
so has part: feature:315807-315888:1:exon
so has part: feature:317711-317834:1:exon
so has part: feature:318273-318329:1:exon
so has part: feature:318406-318486:1:exon
so has part: feature:319047-319099:1:exon
so has part: feature:319207-319368:1:exon
so has part: feature:320504-320628:1:exon
so has part: feature:320717-320797:1:exon
so has part: feature:321162-321387:1:exon
so has part: feature:321815-321892:1:exon
so has part: feature:322225-322282:1:exon
so has part: feature:322704-322844:1:exon
so has part: feature:322956-323050:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315807-315888:1:exon

position:315888:1
position: 315888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:317711-317834:1:exon

position:317711:1
position: 317711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317834:1
position: 317834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:318273-318329:1:exon

position:318273:1
position: 318273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318329:1
position: 318329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:318406-318486:1:exon

position:318406:1
position: 318406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318486:1
position: 318486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:319047-319099:1:exon

position:319047:1
position: 319047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319099:1
position: 319099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:319207-319368:1:exon

position:319207:1
position: 319207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319368:1
position: 319368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:320504-320628:1:exon

position:320504:1
position: 320504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320628:1
position: 320628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:320717-320797:1:exon

position:320717:1
position: 320717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320797:1
position: 320797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:321162-321387:1:exon

position:321162:1
position: 321162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321387:1
position: 321387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:321815-321892:1:exon

position:321815:1
position: 321815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321892:1
position: 321892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:322225-322282:1:exon

position:322225:1
position: 322225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322282:1
position: 322282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:322704-322844:1:exon

position:322704:1
position: 322704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322844:1
position: 322844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:322956-323050:1:exon

position:322956:1
position: 322956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RCOR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: RCOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: REST corepressor 2
translation: MPSVMEKPSGILSRSRAKSVAAGGGPPASEDEGSEDEHAHDSMIRVGADYQAVIPDCKPESPARYSNKELKGMLVWAPNHCVSDAKLDKYIAMAKDKHGYNIEQALGMLLWHKHDVEKSLADLANFTPFPDEWTVEDKVLFEQAFSFHGKSFARIQQMLPDKLIPSLVKYYYSWKKTRSRTSLMDRQARRLLGRKDRDDSNDETDEQRPVTEGETETMDPKKEVWGGMVTPAPSPPPQFIKFQPFYPKTAQYRHHPPARHRRRPPRGMHLSREDVAGVTANPDLGALALRQLDCQLVSLKRQVQRIKQINSGLKQALEGGVEGLRPPEGNSKFSSRWTTDEQLLAVQALRRYGRDFPAVAGVLGNKTVAQVRSFVLGARRRLGLERLLRERDPPGREWGRSQCKDWSQSQPQPKDWSQFCPRSQS
SIO_010081: RCOR2
subclass of: SO_0000673
so part of: RCOR2
location: join(317714..317834,318273..318329,318406..318486,319047..319099,319207..319368,320504..320628,320717..320797,321162..321387,321815..321892,322225..322282,322704..322844,322956..323050)
location: region:317714-323050:1
so has part: feature:317714-317834:1:exon
so has part: feature:318273-318329:1:exon
so has part: feature:318406-318486:1:exon
so has part: feature:319047-319099:1:exon
so has part: feature:319207-319368:1:exon
so has part: feature:320504-320628:1:exon
so has part: feature:320717-320797:1:exon
so has part: feature:321162-321387:1:exon
so has part: feature:321815-321892:1:exon
so has part: feature:322225-322282:1:exon
so has part: feature:322704-322844:1:exon
so has part: feature:322956-323050:1:exon

XP_054039923.1
type: Protein
SIO_000068: ncbiprotein

position:317714:1
position: 317714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317714-317834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:318273-318329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:318406-318486:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319047-319099:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319207-319368:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320504-320628:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320717-320797:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321162-321387:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321815-321892:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:322225-322282:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:322704-322844:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:322956-323050:1:exon

MARK2
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: MARK2
note: microtubule affinity regulating kinase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(324707..341676)
location: region:324707-341676:-1
so has part: feature:324707-341676:-1:exon
subclass of: SO_0000010

128901813
type: Gene
SIO_000068: ncbigene

position:324707:-1
position: 324707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341676:-1
position: 341676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324707-341676:-1:exon

MARK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: MARK2
product: microtubule affinity regulating kinase 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
transcript id: XM_054183969.1
SIO_010081: MARK2
subclass of: SO_0000673
so part of: MARK2
location: complement(join(324707..325915,326933..326977,327361..327387,328295..328558,329483..329599,329693..329790,330241..330423,330960..331086,332232..332344,332458..332557,333687..333806,333883..334119,334630..334686,334816..334886,334978..335043,335205..335253,335369..335422,336552..336725,341074..341676))
location: region:324707-341676:-1
so has part: feature:341074-341676:-1:exon
so has part: feature:336552-336725:-1:exon
so has part: feature:335369-335422:-1:exon
so has part: feature:335205-335253:-1:exon
so has part: feature:334978-335043:-1:exon
so has part: feature:334816-334886:-1:exon
so has part: feature:334630-334686:-1:exon
so has part: feature:333883-334119:-1:exon
so has part: feature:333687-333806:-1:exon
so has part: feature:332458-332557:-1:exon
so has part: feature:332232-332344:-1:exon
so has part: feature:330960-331086:-1:exon
so has part: feature:330241-330423:-1:exon
so has part: feature:329693-329790:-1:exon
so has part: feature:329483-329599:-1:exon
so has part: feature:328295-328558:-1:exon
so has part: feature:327361-327387:-1:exon
so has part: feature:326933-326977:-1:exon
so has part: feature:324707-325915:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:341074-341676:-1:exon

position:341074:-1
position: 341074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336552-336725:-1:exon

position:336552:-1
position: 336552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336725:-1
position: 336725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:335369-335422:-1:exon

position:335369:-1
position: 335369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335422:-1
position: 335422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:335205-335253:-1:exon

position:335205:-1
position: 335205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335253:-1
position: 335253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:334978-335043:-1:exon

position:334978:-1
position: 334978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335043:-1
position: 335043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:334816-334886:-1:exon

position:334816:-1
position: 334816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334886:-1
position: 334886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:334630-334686:-1:exon

position:334630:-1
position: 334630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334686:-1
position: 334686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:333883-334119:-1:exon

position:333883:-1
position: 333883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334119:-1
position: 334119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:333687-333806:-1:exon

position:333687:-1
position: 333687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333806:-1
position: 333806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:332458-332557:-1:exon

position:332458:-1
position: 332458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332557:-1
position: 332557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:332232-332344:-1:exon

position:332232:-1
position: 332232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332344:-1
position: 332344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:330960-331086:-1:exon

position:330960:-1
position: 330960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331086:-1
position: 331086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:330241-330423:-1:exon

position:330241:-1
position: 330241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330423:-1
position: 330423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:329693-329790:-1:exon

position:329693:-1
position: 329693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329790:-1
position: 329790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:329483-329599:-1:exon

position:329483:-1
position: 329483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329599:-1
position: 329599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:328295-328558:-1:exon

position:328295:-1
position: 328295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328558:-1
position: 328558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:327361-327387:-1:exon

position:327361:-1
position: 327361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327387:-1
position: 327387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:326933-326977:-1:exon

position:326933:-1
position: 326933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326977:-1
position: 326977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:324707-325915:-1:exon

position:325915:-1
position: 325915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MARK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: MARK2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: serine/threonine-protein kinase MARK2
translation: MSSSGRSPLPTLNERDAEQPGPAEGKGGGKANMLRGRNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHVLTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPTKRGTLEQIMKDRWMNVGHEDDELKPYMEPVPDYKDPRRTELMVSMGYTREEIQESLVGQKYNEVMATYLLLDHKSSELEESLALKPRAAPDLANSSGPSPAHKVQRSVSANPKRRVSDQAGLSIPTSASYSKKTQAANAENKRXEEAGRKRGGRRAGSTAKVPPSPLPGLERSKGTPSPSTNSVLSTGTTRSRNSPLLDRASLGQSSLQNGKDSCRPSPAAPPAPGAPPRSRQHPKPAATTPADANCEAPRPSGVPSRVPAASPSAHNVSQGPGERPSFPRGVSSRSTFHAGQLRQARDQAPLPYALPPGLPPASPSGASQGRRGPSASLFSKFTSKFVRRNLSFRFARRNPHEPESKDRVETLRPAVGPEKDPREGGGGGREAKPRSLRFTWSMKTTSSLEPGEMLREIRKVLDANSCRCEPQERFVLLCAHGAPGHDSFVQWEMEVCKLPRLSLNGVRFKRIAGTSMAFKNIASKVANELKL
SIO_010081: MARK2
subclass of: SO_0000673
so part of: MARK2
location: complement(join(325555..325915,326933..326977,327361..327387,328295..328558,329483..329599,329693..329790,330241..330423,330960..331086,332232..332344,332458..332557,333687..333806,333883..334119,334630..334686,334816..334886,334978..335043,335205..335253,335369..335422,336552..336725,341074..341130))
location: region:325555-341130:-1
so has part: feature:341074-341130:-1:exon
so has part: feature:336552-336725:-1:exon
so has part: feature:335369-335422:-1:exon
so has part: feature:335205-335253:-1:exon
so has part: feature:334978-335043:-1:exon
so has part: feature:334816-334886:-1:exon
so has part: feature:334630-334686:-1:exon
so has part: feature:333883-334119:-1:exon
so has part: feature:333687-333806:-1:exon
so has part: feature:332458-332557:-1:exon
so has part: feature:332232-332344:-1:exon
so has part: feature:330960-331086:-1:exon
so has part: feature:330241-330423:-1:exon
so has part: feature:329693-329790:-1:exon
so has part: feature:329483-329599:-1:exon
so has part: feature:328295-328558:-1:exon
so has part: feature:327361-327387:-1:exon
so has part: feature:326933-326977:-1:exon
so has part: feature:325555-325915:-1:exon

XP_054039944.1
type: Protein
SIO_000068: ncbiprotein

position:325555:-1
position: 325555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341130:-1
position: 341130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341074-341130:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336552-336725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335369-335422:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335205-335253:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334978-335043:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:334816-334886:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:334630-334686:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:333883-334119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333687-333806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:332458-332557:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:332232-332344:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:330960-331086:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:330241-330423:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:329693-329790:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:329483-329599:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:328295-328558:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:327361-327387:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:326933-326977:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:325555-325915:-1:exon

RTN3
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: RTN3
note: reticulon 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(347141..354676)
location: region:347141-354676:-1
so has part: feature:347141-354676:-1:exon
subclass of: SO_0000010

128901818
type: Gene
SIO_000068: ncbigene

position:347141:-1
position: 347141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354676:-1
position: 354676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347141-354676:-1:exon

RTN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: RTN3
product: reticulon 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054183976.1
SIO_010081: RTN3
subclass of: SO_0000673
so part of: RTN3
location: complement(join(347141..347708,347852..347910,348083..348129,348255..348324,348440..348578,349395..349602,354491..354676))
location: region:347141-354676:-1
so has part: feature:354491-354676:-1:exon
so has part: feature:349395-349602:-1:exon
so has part: feature:348440-348578:-1:exon
so has part: feature:348255-348324:-1:exon
so has part: feature:348083-348129:-1:exon
so has part: feature:347852-347910:-1:exon
so has part: feature:347141-347708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:354491-354676:-1:exon

position:354491:-1
position: 354491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:349395-349602:-1:exon

position:349395:-1
position: 349395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349602:-1
position: 349602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:348440-348578:-1:exon

position:348440:-1
position: 348440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348578:-1
position: 348578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:348255-348324:-1:exon

position:348255:-1
position: 348255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348324:-1
position: 348324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:348083-348129:-1:exon

position:348083:-1
position: 348083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348129:-1
position: 348129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:347852-347910:-1:exon

position:347852:-1
position: 347852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347910:-1
position: 347910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:347141-347708:-1:exon

position:347708:-1
position: 347708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RTN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: RTN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulon-3
translation: MADPAAQFPFVSSSSSSGQPQPGGCGGAGSASCAVHDLLFWRDVKKTGLVFGASLLLLLSLATFSAVSVVAHLALALLSVTISLRVYKAVVQAVQKSEEGHPFRAYLELDLTLSPETFQAHATTVALHLNRALRFLLRLFLVEDLVDSLKLAVVMWLLTSVGAVFNGITLLILAELLAFTLPPLYEKYKVQIDHYVGIARRQTKDLVAKIQAKLPGLAKKKPE
SIO_010081: RTN3
subclass of: SO_0000673
so part of: RTN3
location: complement(join(347663..347708,347852..347910,348083..348129,348255..348324,348440..348578,349395..349602,354491..354593))
location: region:347663-354593:-1
so has part: feature:354491-354593:-1:exon
so has part: feature:349395-349602:-1:exon
so has part: feature:348440-348578:-1:exon
so has part: feature:348255-348324:-1:exon
so has part: feature:348083-348129:-1:exon
so has part: feature:347852-347910:-1:exon
so has part: feature:347663-347708:-1:exon

XP_054039951.1
type: Protein
SIO_000068: ncbiprotein

position:347663:-1
position: 347663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354593:-1
position: 354593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354491-354593:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:349395-349602:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348440-348578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:348255-348324:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:348083-348129:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:347852-347910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:347663-347708:-1:exon

PC
type: Gene
subclass of: SO_0000704
RO_0002162: 75485
gene: PC
note: pyruvate carboxylase; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 356754..383046
location: region:356754-383046:1
so has part: feature:356754-383046:1:exon
subclass of: SO_0000010

128901821
type: Gene
SIO_000068: ncbigene

position:356754:1
position: 356754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383046:1
position: 383046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356754-383046:1:exon

PC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 75485
gene: PC
product: pyruvate carboxylase
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_054183981.1
SIO_010081: PC
subclass of: SO_0000673
so part of: PC
location: join(356754..356803,358650..358782,359553..359738,360667..360833,362015..362160,362988..363105,364181..364332,365711..365829,366622..366784,368369..368551,369648..369792,370897..370986,371831..372052,372884..373040,374140..374380,375314..375563,376324..376568,377383..377562,378999..379247,381698..381838,382784..383046)
location: region:356754-383046:1
so has part: feature:356754-356803:1:exon
so has part: feature:358650-358782:1:exon
so has part: feature:359553-359738:1:exon
so has part: feature:360667-360833:1:exon
so has part: feature:362015-362160:1:exon
so has part: feature:362988-363105:1:exon
so has part: feature:364181-364332:1:exon
so has part: feature:365711-365829:1:exon
so has part: feature:366622-366784:1:exon
so has part: feature:368369-368551:1:exon
so has part: feature:369648-369792:1:exon
so has part: feature:370897-370986:1:exon
so has part: feature:371831-372052:1:exon
so has part: feature:372884-373040:1:exon
so has part: feature:374140-374380:1:exon
so has part: feature:375314-375563:1:exon
so has part: feature:376324-376568:1:exon
so has part: feature:377383-377562:1:exon
so has part: feature:378999-379247:1:exon
so has part: feature:381698-381838:1:exon
so has part: feature:382784-383046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:356754-356803:1:exon

position:356803:1
position: 356803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358650-358782:1:exon

position:358650:1
position: 358650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358782:1
position: 358782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359553-359738:1:exon

position:359553:1
position: 359553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359738:1
position: 359738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:360667-360833:1:exon

position:360667:1
position: 360667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360833:1
position: 360833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:362015-362160:1:exon

position:362015:1
position: 362015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362160:1
position: 362160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:362988-363105:1:exon

position:362988:1
position: 362988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363105:1
position: 363105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:364181-364332:1:exon

position:364181:1
position: 364181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364332:1
position: 364332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:365711-365829:1:exon

position:365711:1
position: 365711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365829:1
position: 365829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:366622-366784:1:exon

position:366622:1
position: 366622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366784:1
position: 366784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:368369-368551:1:exon

position:368369:1
position: 368369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368551:1
position: 368551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:369648-369792:1:exon

position:369648:1
position: 369648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369792:1
position: 369792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:370897-370986:1:exon

position:370897:1
position: 370897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370986:1
position: 370986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:371831-372052:1:exon

position:371831:1
position: 371831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372052:1
position: 372052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:372884-373040:1:exon

position:372884:1
position: 372884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373040:1
position: 373040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:374140-374380:1:exon

position:374140:1
position: 374140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374380:1
position: 374380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:375314-375563:1:exon

position:375314:1
position: 375314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375563:1
position: 375563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:376324-376568:1:exon

position:376324:1
position: 376324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376568:1
position: 376568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:377383-377562:1:exon

position:377383:1
position: 377383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377562:1
position: 377562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:378999-379247:1:exon

position:378999:1
position: 378999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379247:1
position: 379247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:381698-381838:1:exon

position:381698:1
position: 381698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381838:1
position: 381838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:382784-383046:1:exon

position:382784:1
position: 382784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75485
gene: PC
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: pyruvate carboxylase, mitochondrial
translation: MLQLCVPRGGGRALLGVRLLRGPPPGTTRPVSYQPIRKVLVANRGEIAIRVFRACTELGIRTVAVYSEQDTGQMHRQKADEAYLVGRGLPPVQAYLHIPDIIRVAQENGVDAIHPGYGFLSERADFAQACLDAGVRFVGPPPDVVRKMGDKVEARAIAIAAGVPVVPGTSSPVSGLSEAQDFARRVGFPVIFKAAHGGGGRGMRVVRSPEELEESFSRATSEALAAFGNGALFVEKFIERPRHIEVQILGDQHGNVVHLYERDCSIQRRHQKVVEIAPAARLHPELRARLASDAVRLAQQVGYENAGTVEFLVDQSGDYYFIEVNSRLQVEHTVTEEITDVDLVHAQLQVAAGRSLPELGLRQENIRVNGCAIQCRVTTEDPARGFQPDTGRIEVFRSGEGMGIRLDGASAFQGALISPHYDSLLVKVVAHGPDQPAAAAKMSRALAEFRIRGVKTNIPFLQNVLAHPQFLGGAADTQFIDENPELFHLRPGQNRAQKLLHYLGHVMVNGPSTPLPVKAKAALVEPNPPPVPMGDPPAGLRAVLAREGPGGFARAVRGHRGLLLTDTTFRDAHQSLLATRVRTRDLARVAPFVAHNLSPLCSMETWGGATFDVAMRFLHECPWERLRELRRLVPNIPFQMLLRGANAVGYTNYPDNVIYRFCEVAVANGMDIFRVFDALNYLPNLVLGVEAAGRAGAVVEAALSYTGDVADPSRTKYSLDYYLGLARELVAAGTHILCIKDMAGLLTPPAARLLVGALREQFPEVPLHIHTHDTAGAGVASMLAAANAGADVVDVAVDAMSGMTSQPSMGALVACARGTPLDTGIALERVFEYSEYWEAARALYAAFDCTATMKSGNADVYENEIPGGQYTNLHFQAHAMGLGHKFKEVKKAYTEANKILGDLIKVTPSSKVVGDLAQFMVQNGLSREEVEARADELSFPLSVVEFLQGHIGIPPGGFPEPFRSRVLKDLPRVEGRPGASLPPLDFEALGQELGARHGAPTTPEDLLSAALYPKVYDDFRTFTSTFGPVSCLGTRLFLEGPTIAEEFEVELERGKTLHIKALALGDLNAAGQREVFFELNGQLRSILVRDTQAMKEMHVHPKAERGAKGQVGAPMPGEVVEVRVEAGATVAKGDPLCVLSAMKMETVVTAPLAGTVARLHVRPGMSLXGDDLIVEIE
SIO_010081: PC
subclass of: SO_0000673
so part of: PC
location: join(358650..358782,359553..359738,360667..360833,362015..362160,362988..363105,364181..364332,365711..365829,366622..366784,368369..368551,369648..369792,370897..370986,371831..372052,372884..373040,374140..374380,375314..375563,376324..376568,377383..377562,378999..379247,381698..381838,382784..383031)
location: region:358650-383031:1
so has part: feature:358650-358782:1:exon
so has part: feature:359553-359738:1:exon
so has part: feature:360667-360833:1:exon
so has part: feature:362015-362160:1:exon
so has part: feature:362988-363105:1:exon
so has part: feature:364181-364332:1:exon
so has part: feature:365711-365829:1:exon
so has part: feature:366622-366784:1:exon
so has part: feature:368369-368551:1:exon
so has part: feature:369648-369792:1:exon
so has part: feature:370897-370986:1:exon
so has part: feature:371831-372052:1:exon
so has part: feature:372884-373040:1:exon
so has part: feature:374140-374380:1:exon
so has part: feature:375314-375563:1:exon
so has part: feature:376324-376568:1:exon
so has part: feature:377383-377562:1:exon
so has part: feature:378999-379247:1:exon
so has part: feature:381698-381838:1:exon
so has part: feature:382784-383031:1:exon

XP_054039956.1
type: Protein
SIO_000068: ncbiprotein

position:383031:1
position: 383031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358650-358782:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359553-359738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360667-360833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:362015-362160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:362988-363105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:364181-364332:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:365711-365829:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:366622-366784:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:368369-368551:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:369648-369792:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:370897-370986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:371831-372052:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:372884-373040:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:374140-374380:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:375314-375563:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:376324-376568:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:377383-377562:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:378999-379247:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:381698-381838:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:382784-383031:1:exon