Rissa tridactyla isolate bRisTri1 chromosome 27, bRisTri1.patW.cur.20221130, whole genome shotgun sequence.
Rissa tridactyla (black-legged kittiwake)
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Laridae; Rissa.
REFSEQ INFORMATION: The reference sequence is identical to\nCM053011.1.\nAssembly name: bRisTri1.patW.cur.20221130\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2023/02/09. The original whole-genome shotgun project has the\naccession JAPUFG000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 30-NOV-2022\nAssembly Method :: hifiasm v. 0.16.1+galaxy2; Bionano Solve\n v. 3.7.0+galaxy0; SALSA2 v. 2.3+galaxy2\nAssembly Name :: bRisTri1.patW.cur.20221130\nDiploid :: Paternal Haplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 33.0x\nSequencing Technology :: PacBio Sequel II HiFi; Bionano DLS; Arima\n Hi-C v2\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_028500815.1-RS_2023_03\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 03/08/2023\n##Genome-Annotation-Data-END##
uncharacterized LOC128901739; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128901739, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128901739, transcript variant X2
calmodulin 3; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 142 Proteins
protein phosphatase 5 catalytic subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 5 bases in 5 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 5 bases in 5 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 5
uncharacterized LOC128901733; Derived by automated computational analysis using gene prediction method: Gnomon.
hypoxia-inducible factor 3-alpha-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: hypoxia-inducible factor 3-alpha-like
small nuclear ribonucleoprotein D2 polypeptide; Derived by automated computational analysis using gene prediction method: Gnomon.
small nuclear ribonucleoprotein D2 polypeptide
COORDINATES: polyA evidence [ECO:0006239]
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
LOW QUALITY PROTEIN: small nuclear ribonucleoprotein Sm D2
uncharacterized LOC128901735; Derived by automated computational analysis using gene prediction method: Gnomon.
striatin 4; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
fukutin related protein; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
adaptor related protein complex 2 subunit sigma 1; Derived by automated computational analysis using gene prediction method: Gnomon.
adaptor related protein complex 2 subunit sigma 1
Rho GTPase activating protein 35; Derived by automated computational analysis using gene prediction method: Gnomon.
Rho GTPase activating protein 35, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
Rho GTPase activating protein 35, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
Rho GTPase activating protein 35, transcript variant X2
transmembrane protein 160; Derived by automated computational analysis using gene prediction method: Gnomon.
tubulin folding cofactor B; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
RNA polymerase II subunit I; Derived by automated computational analysis using gene prediction method: Gnomon.
DNA-directed RNA polymerase II subunit RPB9
WD repeat domain 62; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
THAP domain containing 8; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
CAP-Gly domain containing linker protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
CAP-Gly domain containing linker protein 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
CAP-Gly domain-containing linker protein 3
DM1 locus, WD repeat containing; Derived by automated computational analysis using gene prediction method: Gnomon.
DM1 locus, WD repeat containing, transcript variant X2
DM1 locus, WD repeat containing, transcript variant X1
dystrophia myotonica WD repeat-containing protein isoform X2
dystrophia myotonica WD repeat-containing protein isoform X1
symplekin scaffold protein; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
coiled-coil domain containing 61; Derived by automated computational analysis using gene prediction method: Gnomon.
coiled-coil domain containing 61, transcript variant X1
coiled-coil domain containing 61, transcript variant X2
biogenesis of lysosomal organelles complex 1 subunit 3; Derived by automated computational analysis using gene prediction method: Gnomon.
biogenesis of lysosomal organelles complex 1 subunit 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
biogenesis of lysosome-related organelles complex 1 subunit 3
NTPase KAP family P-loop domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
NTPase KAP family P-loop domain containing 1, transcript variant X1
NTPase KAP family P-loop domain containing 1, transcript variant X2
NTPase KAP family P-loop domain-containing protein 1 isoform X1
NTPase KAP family P-loop domain-containing protein 1 isoform X2
NTPase KAP family P-loop domain containing 1, transcript variant X3
NTPase KAP family P-loop domain-containing protein 1 isoform X3
protein phosphatase 1 regulatory subunit 37; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 1 regulatory subunit 37, transcript variant X5
protein phosphatase 1 regulatory subunit 37, transcript variant X1
protein phosphatase 1 regulatory subunit 37, transcript variant X4
protein phosphatase 1 regulatory subunit 37, transcript variant X6
protein phosphatase 1 regulatory subunit 37, transcript variant X9
protein phosphatase 1 regulatory subunit 37, transcript variant X7
protein phosphatase 1 regulatory subunit 37, transcript variant X8
protein phosphatase 1 regulatory subunit 37 isoform X3
protein phosphatase 1 regulatory subunit 37 isoform X1
protein phosphatase 1 regulatory subunit 37 isoform X4
protein phosphatase 1 regulatory subunit 37 isoform X5
protein phosphatase 1 regulatory subunit 37 isoform X7
protein phosphatase 1 regulatory subunit 37 isoform X6
protein phosphatase 1 regulatory subunit 37, transcript variant X2
protein phosphatase 1 regulatory subunit 37, transcript variant X3
protein phosphatase 1 regulatory subunit 37 isoform X2
gem nuclear organelle associated protein 7; Derived by automated computational analysis using gene prediction method: Gnomon.
gem nuclear organelle associated protein 7, transcript variant X1
gem nuclear organelle associated protein 7, transcript variant X2
CLK4 associating serine/arginine rich protein; Derived by automated computational analysis using gene prediction method: Gnomon.
CLK4 associating serine/arginine rich protein, transcript variant X1
CLK4 associating serine/arginine rich protein, transcript variant X2
CLK4-associating serine/arginine rich protein isoform X1
CLK4-associating serine/arginine rich protein isoform X2
CLK4 associating serine/arginine rich protein, transcript variant X3
RELB proto-oncogene, NF-kB subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
RELB proto-oncogene, NF-kB subunit, transcript variant X2
RELB proto-oncogene, NF-kB subunit, transcript variant X1
CLPTM1 regulator of GABA type A receptor forward trafficking; Derived by automated computational analysis using gene prediction method: Gnomon.
CLPTM1 regulator of GABA type A receptor forward trafficking
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
LOW QUALITY PROTEIN: putative lipid scramblase CLPTM1
Myb related transcription factor, partner of profilin; Derived by automated computational analysis using gene prediction method: Gnomon.
Myb related transcription factor, partner of profilin, transcript variant X2
Myb related transcription factor, partner of profilin, transcript variant X3
Myb related transcription factor, partner of profilin, transcript variant X1
myb-related transcription factor, partner of profilin isoform X1
myb-related transcription factor, partner of profilin isoform X2
ERCC excision repair 1, endonuclease non-catalytic subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
ERCC excision repair 1, endonuclease non-catalytic subunit, transcript variant X2
ERCC excision repair 1, endonuclease non-catalytic subunit, transcript variant X3
ERCC excision repair 1, endonuclease non-catalytic subunit, transcript variant X1
DNA excision repair protein ERCC-1 isoform X1
DNA excision repair protein ERCC-1 isoform X2
DNA excision repair protein ERCC-1 isoform X3
RNA polymerase I subunit G; Derived by automated computational analysis using gene prediction method: Gnomon.
DNA-directed RNA polymerase I subunit RPA34
protein phosphatase 1 regulatory subunit 13 like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 1 regulatory subunit 13 like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein; Derived by automated computational analysis using gene prediction method: Gnomon.
leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein
LOW QUALITY PROTEIN: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein
uncharacterized LOC128901744; Derived by automated computational analysis using gene prediction method: Gnomon.
DExH-box helicase 34; Derived by automated computational analysis using gene prediction method: Gnomon.
DExH-box helicase 34, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
DExH-box helicase 34, transcript variant X7
DExH-box helicase 34, transcript variant X10
DExH-box helicase 34, transcript variant X6
DExH-box helicase 34, transcript variant X1
DExH-box helicase 34, transcript variant X2
DExH-box helicase 34, transcript variant X3
DExH-box helicase 34, transcript variant X5
DExH-box helicase 34, transcript variant X9
probable ATP-dependent RNA helicase DHX34 isoform X1
DExH-box helicase 34, transcript variant X8
probable ATP-dependent RNA helicase DHX34 isoform X2
DExH-box helicase 34, transcript variant X12
DExH-box helicase 34, transcript variant X11
probable ATP-dependent RNA helicase DHX34 isoform X4
probable ATP-dependent RNA helicase DHX34 isoform X3
C5a anaphylatoxin chemotactic receptor 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
C5a anaphylatoxin chemotactic receptor 1-like
uncharacterized LOC128901593; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC128901593
basic salivary proline-rich protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
basic salivary proline-rich protein 2-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
LOW QUALITY PROTEIN: basic salivary proline-rich protein 2-like
uncharacterized LOC128901732; Derived by automated computational analysis using gene prediction method: Gnomon.
butyrophilin subfamily 3 member A2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
butyrophilin subfamily 1 member A1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128901720; Derived by automated computational analysis using gene prediction method: Gnomon.
SH3 binding domain protein 5 like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
zinc finger protein 345-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins
zinc finger protein 883-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 883-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 74 Proteins
zinc finger protein 883-like, transcript variant X3
zinc finger protein 883-like, transcript variant X1
zinc finger protein 3 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
LOW QUALITY PROTEIN: zinc finger protein 3 homolog
epithelial discoidin domain-containing receptor 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
epithelial discoidin domain-containing receptor 1-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: epithelial discoidin domain-containing receptor 1-like
uncharacterized LOC128901722; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128901722, transcript variant X2
uncharacterized LOC128901722, transcript variant X1
class I histocompatibility antigen, F10 alpha chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 128 Proteins
uncharacterized LOC128901718; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128901719; Derived by automated computational analysis using gene prediction method: Gnomon.
antigen peptide transporter 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
class I histocompatibility antigen, F10 alpha chain-like
uncharacterized LOC128901689; Derived by automated computational analysis using gene prediction method: Gnomon.
C-type lectin domain family 2 member D-like; Derived by automated computational analysis using gene prediction method: Gnomon.
C-type lectin domain family 2 member D-like, transcript variant X4
C-type lectin domain family 2 member D-like, transcript variant X3
C-type lectin domain family 2 member D-like, transcript variant X1
C-type lectin domain family 2 member D-like, transcript variant X5
C-type lectin domain family 2 member D-like, transcript variant X6
C-type lectin domain family 2 member D-like, transcript variant X2
C-type lectin domain family 2 member D-like isoform X2
C-type lectin domain family 2 member D-like isoform X1
C-type lectin domain family 2 member B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
C-type lectin domain family 2 member B-like
butyrophilin subfamily 3 member A2-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
butyrophilin subfamily 3 member A2-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
collagen alpha-2(XI) chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 7 bases in 5 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 7 bases in 5 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: collagen alpha-2(XI) chain-like
HLA class II histocompatibility antigen, DR alpha chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
HLA class II histocompatibility antigen, DR alpha chain-like
class II histocompatibility antigen, B-L beta chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
class II histocompatibility antigen, B-L beta chain-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 246 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 247 Proteins
bromodomain containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: bromodomain-containing protein 2
class II histocompatibility antigen, M alpha chain; Derived by automated computational analysis using gene prediction method: Gnomon.
class II histocompatibility antigen, M alpha chain, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
class II histocompatibility antigen, M alpha chain, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
class II histocompatibility antigen, M alpha chain isoform X1
class II histocompatibility antigen, M alpha chain isoform X2
HLA class II histocompatibility antigen, DM beta chain; Derived by automated computational analysis using gene prediction method: Gnomon.
HLA class II histocompatibility antigen, DM beta chain
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
collagen alpha-1(XI) chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: collagen alpha-1(XI) chain-like
retinoid X receptor beta; Derived by automated computational analysis using gene prediction method: Gnomon.
retinoid X receptor beta, transcript variant X3
retinoid X receptor beta, transcript variant X1
retinoic acid receptor RXR-beta isoform X3
retinoic acid receptor RXR-beta isoform X1
retinoid X receptor beta, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins
retinoic acid receptor RXR-beta isoform X2
solute carrier family 39 member 7; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
LOW QUALITY PROTEIN: zinc transporter SLC39A7
hydroxysteroid 17-beta dehydrogenase 8; Derived by automated computational analysis using gene prediction method: Gnomon.
hydroxysteroid 17-beta dehydrogenase 8, transcript variant X4
hydroxysteroid 17-beta dehydrogenase 8, transcript variant X1
hydroxysteroid 17-beta dehydrogenase 8, transcript variant X3
hydroxysteroid 17-beta dehydrogenase 8, transcript variant X2
(3R)-3-hydroxyacyl-CoA dehydrogenase isoform X3
(3R)-3-hydroxyacyl-CoA dehydrogenase isoform X4
(3R)-3-hydroxyacyl-CoA dehydrogenase isoform X1
(3R)-3-hydroxyacyl-CoA dehydrogenase isoform X2
ring finger protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
VPS52 subunit of GARP complex; Derived by automated computational analysis using gene prediction method: Gnomon.
VPS52 subunit of GARP complex, transcript variant X1
VPS52 subunit of GARP complex, transcript variant X2
vacuolar protein sorting-associated protein 52 homolog isoform X2
vacuolar protein sorting-associated protein 52 homolog isoform X1
ribosomal protein S18; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128901662; Derived by automated computational analysis using gene prediction method: Gnomon.
C-type lectin domain family 2 member B-like, transcript variant X1
C-type lectin domain family 2 member B-like, transcript variant X3
C-type lectin domain family 2 member B-like, transcript variant X2
C-type lectin domain family 2 member D6-like isoform X2
C-type lectin domain family 2 member B-like isoform X1
C-type lectin domain family 2 member B-like, transcript variant X4
C-type lectin domain family 2 member B-like isoform X2
C-type lectin domain family 2 member B-like isoform X4
C-type lectin domain family 2 member B-like isoform X3
transporter 2, ATP binding cassette subfamily B member; Derived by automated computational analysis using gene prediction method: Gnomon.
transporter 2, ATP binding cassette subfamily B member, transcript variant X5
transporter 2, ATP binding cassette subfamily B member, transcript variant X1
transporter 2, ATP binding cassette subfamily B member, transcript variant X4
transporter 2, ATP binding cassette subfamily B member, transcript variant X3
transporter 2, ATP binding cassette subfamily B member, transcript variant X2
tenascin-X-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
steroid 21-hydroxylase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: steroid 21-hydroxylase-like
leukotriene B4 receptor 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: leukotriene B4 receptor 1-like
zinc finger and BTB domain-containing protein 9-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger and BTB domain-containing protein 9-like
LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 9-like
uncharacterized LOC128901609; Derived by automated computational analysis using gene prediction method: Gnomon.
coiled-coil alpha-helical rod protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128901678; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128901678, transcript variant X2
uncharacterized LOC128901678, transcript variant X1
uncharacterized LOC128901678, transcript variant X3
synaptic Ras GTPase activating protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
synaptic Ras GTPase activating protein 1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
LOW QUALITY PROTEIN: ras/Rap GTPase-activating protein SynGAP
uncharacterized LOC128901715; Derived by automated computational analysis using gene prediction method: Gnomon.
exocyst complex component 3 like 2; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
LOW QUALITY PROTEIN: exocyst complex component 3-like protein 2
microtubule affinity regulating kinase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
microtubule affinity regulating kinase 4, transcript variant X2
microtubule affinity regulating kinase 4, transcript variant X1
MAP/microtubule affinity-regulating kinase 4 isoform X1
MAP/microtubule affinity-regulating kinase 4 isoform X2
microtubule affinity regulating kinase 4, transcript variant X3
MAP/microtubule affinity-regulating kinase 4 isoform X3
collagen alpha-2(I) chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
creatine kinase, M-type; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: creatine kinase M-type
ERCC excision repair 2, TFIIH core complex helicase subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
ERCC excision repair 2, TFIIH core complex helicase subunit
general transcription and DNA repair factor IIH helicase subunit XPD
delta like canonical Notch ligand 3; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: delta-like protein 3
translocase of inner mitochondrial membrane 50; Derived by automated computational analysis using gene prediction method: Gnomon.
translocase of inner mitochondrial membrane 50
mitochondrial import inner membrane translocase subunit TIM50
SPT5 homolog, DSIF elongation factor subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
SPT5 homolog, DSIF elongation factor subunit, transcript variant X4
transcription elongation factor SPT5 isoform X3
SPT5 homolog, DSIF elongation factor subunit, transcript variant X3
SPT5 homolog, DSIF elongation factor subunit, transcript variant X2
SPT5 homolog, DSIF elongation factor subunit, transcript variant X1
transcription elongation factor SPT5 isoform X2
transcription elongation factor SPT5 isoform X1
mediator complex subunit 29; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 29
sterile alpha motif domain containing 4B; Derived by automated computational analysis using gene prediction method: Gnomon.
sterile alpha motif domain containing 4B
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 7 bases in 6 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 7 bases in 6 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: protein Smaug homolog 2
leucine rich repeat and fibronectin type III domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
leucine rich repeat and fibronectin type III domain containing 1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: leucine-rich repeat and fibronectin type III domain-containing protein 1
syncollin; Derived by automated computational analysis using gene prediction method: Gnomon.
p21 (RAC1) activated kinase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
p21 (RAC1) activated kinase 4, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins
p21 (RAC1) activated kinase 4, transcript variant X1
p21 (RAC1) activated kinase 4, transcript variant X6
p21 (RAC1) activated kinase 4, transcript variant X4
p21 (RAC1) activated kinase 4, transcript variant X3
p21 (RAC1) activated kinase 4, transcript variant X2
serine/threonine-protein kinase PAK 4 isoform X1
serine/threonine-protein kinase PAK 4 isoform X2
mitochondrial ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Gnomon.
mitochondrial ribosomal protein S12, transcript variant X2
mitochondrial ribosomal protein S12, transcript variant X1
28S ribosomal protein S12, mitochondrial
seryl-tRNA synthetase 2, mitochondrial; Derived by automated computational analysis using gene prediction method: Gnomon.
NFKB inhibitor beta; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
LOW QUALITY PROTEIN: NF-kappa-B inhibitor beta
sirtuin 2; Derived by automated computational analysis using gene prediction method: Gnomon.
NAD-dependent protein deacetylase sirtuin-2
protein phosphatase 1 regulatory subunit 10; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 1 regulatory subunit 10
LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 1 regulatory subunit 10
uncharacterized LOC128901714; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128901714, transcript variant X2
uncharacterized LOC128901714, transcript variant X3
uncharacterized LOC128901714, transcript variant X1
ATP binding cassette subfamily F member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ATP binding cassette subfamily F member 1
ATP-binding cassette sub-family F member 1
G protein nucleolar 1 (putative); Derived by automated computational analysis using gene prediction method: Gnomon.
guanine nucleotide-binding protein-like 1
ribonuclease P/MRP subunit p21; Derived by automated computational analysis using gene prediction method: Gnomon.
ribonuclease P/MRP subunit p21, transcript variant X3
ribonuclease P/MRP subunit p21, transcript variant X1
ribonuclease P/MRP subunit p21, transcript variant X4
ribonuclease P/MRP subunit p21, transcript variant X2
ribonuclease P protein subunit p21 isoform X1
ribonuclease P protein subunit p21 isoform X4
ribonuclease P protein subunit p21 isoform X3
ribonuclease P protein subunit p21 isoform X2
E3 ubiquitin-protein ligase TRIM39-like; Derived by automated computational analysis using gene prediction method: Gnomon.
E3 ubiquitin-protein ligase TRIM39-like, transcript variant X1
E3 ubiquitin-protein ligase TRIM39-like, transcript variant X2
protein phosphatase 1 regulatory inhibitor subunit 11; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 1 regulatory inhibitor subunit 11
RNA polymerase I subunit H; Derived by automated computational analysis using gene prediction method: Gnomon.
RNA polymerase I subunit H, transcript variant X3
RNA polymerase I subunit H, transcript variant X1
RNA polymerase I subunit H, transcript variant X2
DNA-directed RNA polymerase I subunit RPA12
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase; Derived by automated computational analysis using gene prediction method: Gnomon.
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X3
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X4
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X1
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X5
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
RING finger protein 39-like; Derived by automated computational analysis using gene prediction method: Gnomon.
RING finger protein 39-like, transcript variant X2
RING finger protein 39-like, transcript variant X3
RING finger protein 39-like, transcript variant X1
butyrophilin subfamily 1 member A1-like, transcript variant X4
histone H1B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
butyrophilin subfamily 1 member A1-like, transcript variant X3
butyrophilin subfamily 1 member A1-like, transcript variant X2
butyrophilin subfamily 1 member A1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 Proteins
killer cell lectin-like receptor subfamily F member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
killer cell lectin-like receptor subfamily F member 1, transcript variant X4
killer cell lectin-like receptor subfamily F member 1 isoform X3
killer cell lectin-like receptor subfamily F member 1, transcript variant X3
killer cell lectin-like receptor subfamily F member 1, transcript variant X2
killer cell lectin-like receptor subfamily F member 1, transcript variant X1
uncharacterized protein LOC128901667 isoform X1
uncharacterized protein LOC128901667 isoform X2
uncharacterized LOC128901614; Derived by automated computational analysis using gene prediction method: Gnomon.
killer cell lectin-like receptor subfamily F member 1
zinc finger protein 692-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 692-like, transcript variant X2
zinc finger protein 692-like, transcript variant X1
zinc finger protein 692-like, transcript variant X3
E3 ubiquitin-protein ligase TRIM7-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins
zinc finger protein 850-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein CKR1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein CKR1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
zinc finger protein CKR1-like, transcript variant X4
zinc finger protein CKR1-like, transcript variant X2
zinc finger protein CKR1-like, transcript variant X3
zinc finger protein CKR1-like isoform X2
zinc finger protein CKR1-like isoform X1
zinc finger protein CKR1-like isoform X3
transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
interleukin 4 induced 1; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
E3 ubiquitin-protein ligase TRIM7-like, transcript variant X4
E3 ubiquitin-protein ligase TRIM7-like, transcript variant X5
E3 ubiquitin-protein ligase TRIM7-like, transcript variant X3
E3 ubiquitin-protein ligase TRIM7-like, transcript variant X2
E3 ubiquitin-protein ligase TRIM7-like, transcript variant X1
E3 ubiquitin-protein ligase TRIM7-like isoform X5
E3 ubiquitin-protein ligase TRIM7-like isoform X4
E3 ubiquitin-protein ligase TRIM7-like isoform X3
E3 ubiquitin-protein ligase TRIM7-like isoform X2
E3 ubiquitin-protein ligase TRIM7-like isoform X1
E3 ubiquitin-protein ligase TRIM7-like, transcript variant X7
E3 ubiquitin-protein ligase TRIM7-like, transcript variant X6
E3 ubiquitin-protein ligase TRIM7-like isoform X6
uncharacterized LOC128901721; Derived by automated computational analysis using gene prediction method: Gnomon.
transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins
E3 ubiquitin-protein ligase TRIM39-like isoform X2
E3 ubiquitin-protein ligase TRIM39-like isoform X1
E3 ubiquitin-protein ligase TRIM52-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins
uncharacterized LOC128901717; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128901716; Derived by automated computational analysis using gene prediction method: Gnomon.
tripartite motif containing 41; Derived by automated computational analysis using gene prediction method: Gnomon.
receptor for activated C kinase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
receptor of activated protein C kinase 1
tripartite motif-containing protein 15-like; Derived by automated computational analysis using gene prediction method: Gnomon.
tripartite motif-containing protein 15-like, transcript variant X2
tripartite motif-containing protein 15-like, transcript variant X1
tripartite motif-containing protein 15-like, transcript variant X3
golgin subfamily A member 4-like isoform X3
tripartite motif-containing protein 15-like isoform X2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
uncharacterized LOC128901723; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM7-like
alpha tubulin acetyltransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
chromosome 27 C6orf136 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized protein C6orf136 homolog
DEAH-box helicase 16; Derived by automated computational analysis using gene prediction method: Gnomon.
DEAH-box helicase 16, transcript variant X2
DEAH-box helicase 16, transcript variant X1
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X2
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
DEAH-box helicase 16, transcript variant X3
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X3
protein phosphatase 1 regulatory subunit 18; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 1 regulatory subunit 18
kelch-like protein 10; Derived by automated computational analysis using gene prediction method: Gnomon.