Megalobrama amblycephala mitochondrion, complete genome.
type: Entry
definition: Megalobrama amblycephala mitochondrion, complete genome.
sequence version: NC_010341.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_010341.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Megalobrama amblycephala (Wuchang bream)
organism: Megalobrama amblycephala
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Megalobrama.
reference: 1
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence was derived from EU434747.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16623
topology: circular
so has quality: SO_0000988
location: 1..16623
location: region:1-16623:1
RO_0002162: 75352

NC_010341
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: The complete mitochondrial genome of blunt snout bream, Megalobrama amblycephala
author: Yan, J.
author: Liu, S.
author: Guo, X.
author: Liu, Y.
journal: Unpublished

2
title: Direct Submission
journal: Submitted (12-FEB-2008) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Yan, J.
author: Liu, S.
author: Guo, X.
author: Liu, Y.
journal: Submitted (30-JAN-2008) College of Life Science, Hunan Normal University, Lushan Road, Changsha, Hunan 410081, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16623:1
position: 16623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16623:1:source
so part of: sequence
organism: Megalobrama amblycephala
organelle: mitochondrion
mol type: genomic DNA

75352
type: Taxonomy
SIO_000068: taxonomy

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 75352
so part of: sequence
location: 1..937
location: region:1-937:1
so has part: feature:1-937:1:region

position:937:1
position: 937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-937:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Phe
so part of: sequence
location: 938..1006
location: region:938-1006:1
so has part: feature:938-1006:1:region

position:938:1
position: 938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006:1
position: 1006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938-1006:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 75352
product: s-rRNA
note: 12S ribosomal RNA
so part of: sequence
location: 1007..1968
location: region:1007-1968:1
so has part: feature:1007-1968:1:region

position:1007:1
position: 1007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1968:1
position: 1968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1007-1968:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Val
so part of: sequence
location: 1969..2040
location: region:1969-2040:1
so has part: feature:1969-2040:1:region

position:1969:1
position: 1969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2040:1
position: 2040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1969-2040:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 75352
product: l-rRNA
note: 16S ribosomal RNA
so part of: sequence
location: 2041..3732
location: region:2041-3732:1
so has part: feature:2041-3732:1:region

position:2041:1
position: 2041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3732:1
position: 3732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2041-3732:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Leu
codon recognized: UUR
so part of: sequence
location: 3734..3809
location: region:3734-3809:1
so has part: feature:3734-3809:1:region

position:3734:1
position: 3734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3809:1
position: 3809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3734-3809:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 75352
gene: ND1
so part of: sequence
location: 3811..4785
location: region:3811-4785:1
so has part: feature:3811-4785:1:exon
subclass of: SO_0000010

5912302
type: Gene
SIO_000068: ncbigene

position:3811:1
position: 3811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4785:1
position: 4785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3811-4785:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75352
gene: ND1
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MLNTLMNHLINPLAYIVPVLLAVAFLTLIERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFTKEPVRPSTSSPFLFLATPILALTLAMTLWAPMPMPYPVIDLNLGVLFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFSGGYTLQTFSTAQESIWLLAPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAVLFLGTSHIHHIPELTTISLMTKAALLSIVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVLWHIALPIALAGLPPQL
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 3811..4785
location: region:3811-4785:1
so has part: feature:3811-4785:1:exon

YP_001686724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3811-4785:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Ile
so part of: sequence
location: 4790..4861
location: region:4790-4861:1
so has part: feature:4790-4861:1:region

position:4790:1
position: 4790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4861:1
position: 4861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4790-4861:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Gln
so part of: sequence
location: complement(4860..4930)
location: region:4860-4930:-1
so has part: feature:4860-4930:-1:region

position:4860:-1
position: 4860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4930:-1
position: 4930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4860-4930:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Met
so part of: sequence
location: 4932..5000
location: region:4932-5000:1
so has part: feature:4932-5000:1:region

position:4932:1
position: 4932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5000:1
position: 5000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4932-5000:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 75352
gene: ND2
so part of: sequence
location: 5001..6045
location: region:5001-6045:1
so has part: feature:5001-6045:1:exon
subclass of: SO_0000010

5912303
type: Gene
SIO_000068: ncbigene

position:5001:1
position: 5001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6045:1
position: 6045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5001-6045:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75352
gene: ND2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:6045,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPYVLAVLLSSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMIMFASTTNAWITGEWDMNNMSNPIASTMIITALALKIGLAPMHFWMPEVLQGLDLLTGLILSTWQKLAPFALIIQTAQAVDPVLLTALGVMSTLIGGWGGLNQTQLRKILAYSSIAHMGWMIIILQYAPQLTLLALGTYIFMTSAAFLTLKTSSVTKINTLSMVWSKSPVLTTTTALVLLSLGGLPPLTGFMPKWLILQELAKQNLPITATIMALAALLSLYFYLRLCYAMTLTISPNTINSITPWRTQTTQSSLPLTLSTTIALGLLPMTPAILMLAT
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 5001..6045
location: region:5001-6045:1
so has part: feature:5001-6045:1:exon

YP_001686725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5001-6045:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Trp
so part of: sequence
location: 6046..6116
location: region:6046-6116:1
so has part: feature:6046-6116:1:region

position:6046:1
position: 6046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6116:1
position: 6116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6046-6116:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Ala
so part of: sequence
location: complement(6118..6186)
location: region:6118-6186:-1
so has part: feature:6118-6186:-1:region

position:6118:-1
position: 6118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6186:-1
position: 6186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6118-6186:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Asn
so part of: sequence
location: complement(6188..6260)
location: region:6188-6260:-1
so has part: feature:6188-6260:-1:region

position:6188:-1
position: 6188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6260:-1
position: 6260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6188-6260:-1:region

rep_origin
type: Replication Origin
subclass of: SO_0000296
RO_0002162: 75352
note: replication origin of L-strand
so part of: sequence
location: 6261..6292
location: region:6261-6292:1
so has part: feature:6261-6292:1:region

position:6261:1
position: 6261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6292:1
position: 6292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6261-6292:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Cys
so part of: sequence
location: complement(6293..6360)
location: region:6293-6360:-1
so has part: feature:6293-6360:-1:region

position:6293:-1
position: 6293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6360:-1
position: 6360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6293-6360:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Tyr
so part of: sequence
location: complement(6363..6433)
location: region:6363-6433:-1
so has part: feature:6363-6433:-1:region

position:6363:-1
position: 6363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6433:-1
position: 6433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6363-6433:-1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 75352
gene: COX1
so part of: sequence
location: 6435..7985
location: region:6435-7985:1
so has part: feature:6435-7985:1:exon
subclass of: SO_0000010

5912298
type: Gene
SIO_000068: ncbigene

position:6435:1
position: 6435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7985:1
position: 7985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6435-7985:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75352
gene: COX1
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MAITRWFFSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGSLLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPAISQYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGSGIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWETPMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAAFVHWFPLFTGYTLNDTWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPDAYALWNTVSSIGSLISLVAVIMFLFILWEAFAAKREVSSVELTMTNVEWLHGCPPPYHTFEEPAFVQVQSN
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 6435..7985
location: region:6435-7985:1
so has part: feature:6435-7985:1:exon

YP_001686726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6435-7985:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Ser
codon recognized: UCN
so part of: sequence
location: complement(7986..8056)
location: region:7986-8056:-1
so has part: feature:7986-8056:-1:region

position:7986:-1
position: 7986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8056:-1
position: 8056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7986-8056:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Asp
so part of: sequence
location: 8059..8132
location: region:8059-8132:1
so has part: feature:8059-8132:1:region

position:8059:1
position: 8059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8132:1
position: 8132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8059-8132:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 75352
gene: COX2
so part of: sequence
location: 8146..8836
location: region:8146-8836:1
so has part: feature:8146-8836:1:exon
subclass of: SO_0000010

5912295
type: Gene
SIO_000068: ncbigene

position:8146:1
position: 8146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8836:1
position: 8836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8146-8836:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75352
gene: COX2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:8836,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPTQLGFQDAASPVMEELLHFHDHALMIVFLISTLVLYIIIAMVSTKLTNKYILDSQEIEIVWTILPAVILVLIALPSLRILYLMDEINDPHLTIKAMGHQWYWSYEYTDYEDLGFDSYMIPTQDLTPGQFRLLETDHRMVVPMESPVRVLVSAEDVLHSWAVPSLGVKMDAVPGRLNQTAFIASRPGVFYGQCSEICGANHSFMPIVVEAVPLEHFESWSSLMLEDA
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 8146..8836
location: region:8146-8836:1
so has part: feature:8146-8836:1:exon

YP_001686727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8146-8836:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Lys
so part of: sequence
location: 8837..8912
location: region:8837-8912:1
so has part: feature:8837-8912:1:region

position:8837:1
position: 8837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8912:1
position: 8912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8837-8912:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 75352
gene: ATP8
so part of: sequence
location: 8914..9078
location: region:8914-9078:1
so has part: feature:8914-9078:1:exon
subclass of: SO_0000010

5912292
type: Gene
SIO_000068: ncbigene

position:8914:1
position: 8914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9078:1
position: 9078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8914-9078:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75352
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPNPWFAILVFSWIIFLTIIPTKVLNHTTPNEPTPMSEEKHKTEPWDWPW
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 8914..9078
location: region:8914-9078:1
so has part: feature:8914-9078:1:exon

YP_001686728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8914-9078:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 75352
gene: ATP6
so part of: sequence
location: 9072..9755
location: region:9072-9755:1
so has part: feature:9072-9755:1:exon
subclass of: SO_0000010

5912294
type: Gene
SIO_000068: ncbigene

position:9072:1
position: 9072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9755:1
position: 9755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9072-9755:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75352
gene: ATP6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MMTSFFDQFASPSFLGIPLIAIAIALPWLLFPTPPSRWINNRLITLQTWFINRFTNQLMMPLNVGGHKWALLLASLMVFLITINMLGLLPYTFTPTTQLSLNMGFAVPLWLATVIIGMRNQPTVALGHLLPEGTPIPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAVFVLLPMMPTVAILTAAVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 9072..9755
location: region:9072-9755:1
so has part: feature:9072-9755:1:exon

YP_001686729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9072-9755:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 75352
gene: COX3
so part of: sequence
location: 9755..10539
location: region:9755-10539:1
so has part: feature:9755-10539:1:exon
subclass of: SO_0000010

5912301
type: Gene
SIO_000068: ncbigene

position:10539:1
position: 10539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9755-10539:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75352
gene: COX3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:10538..10539,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHAYHMVDPSPWPLTGAVGALLMTSGLAIWFHFHSTTLMTLGMILLLLTMFQWWRDIIREGTFQGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGIITLDPFEVPLLNTAVLLASGVTVTWAHHSIMEGERKQAIQSLALTILLGLYFTALQAMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSSFLAVCLLRQVQYHFTSEHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 9755..10539
location: region:9755-10539:1
so has part: feature:9755-10539:1:exon

YP_001686730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9755-10539:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Gly
so part of: sequence
location: 10540..10611
location: region:10540-10611:1
so has part: feature:10540-10611:1:region

position:10540:1
position: 10540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10611:1
position: 10611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10540-10611:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 75352
gene: ND3
so part of: sequence
location: 10612..10960
location: region:10612-10960:1
so has part: feature:10612-10960:1:exon
subclass of: SO_0000010

5912299
type: Gene
SIO_000068: ncbigene

position:10612:1
position: 10612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10960:1
position: 10960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10612-10960:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75352
gene: ND3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:10960,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLIMTILTITVALSSILAIVSFWLPQMNPDAEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLHNPTGTFFWAATVLILLTLGLIYEWTQGGLEWAE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 10612..10960
location: region:10612-10960:1
so has part: feature:10612-10960:1:exon

YP_001686731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10612-10960:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Arg
so part of: sequence
location: 10961..11030
location: region:10961-11030:1
so has part: feature:10961-11030:1:region

position:10961:1
position: 10961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11030:1
position: 11030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10961-11030:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 75352
gene: ND4L
so part of: sequence
location: 11031..11327
location: region:11031-11327:1
so has part: feature:11031-11327:1:exon
subclass of: SO_0000010

5912297
type: Gene
SIO_000068: ncbigene

position:11031:1
position: 11031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11327:1
position: 11327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11031-11327:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75352
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MTPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALALWALQFESTSFSAAPMLLLAFSACEASTGLALLVATARTHGTDRLQNLNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 11031..11327
location: region:11031-11327:1
so has part: feature:11031-11327:1:exon

YP_001686732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11031-11327:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 75352
gene: ND4
so part of: sequence
location: 11321..12702
location: region:11321-12702:1
so has part: feature:11321-12702:1:exon
subclass of: SO_0000010

5912296
type: Gene
SIO_000068: ncbigene

position:11321:1
position: 11321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12702:1
position: 12702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11321-12702:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75352
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:12701..12702,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKVLIPTVMLFPTIWLTSPKWLWTTTTAHSLLIALISLTWLKWTSETGWTMSNSYLATDPLSTPLLVLTCWLLPLMILASQNHINPEPISRQRLYITLLTSLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQQSTGTLSMLVIQYSQPMLLNSWGHKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMMIMLDPLSKELVYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFSGAIILMIAHGLVSSMLFCLANTAYERTHSRTMILARGLQMIFPLTAVWWFIANLANLALPPLPNLMGELMIITTLFNWSPWTIALTGAGTLITAGYSLYMFLMSQRGPTPSHITKLPPFHTREHLLMALHLIPVILLVTKPELMWGWCY
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 11321..12702
location: region:11321-12702:1
so has part: feature:11321-12702:1:exon

YP_001686733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11321-12702:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-His
so part of: sequence
location: 12703..12771
location: region:12703-12771:1
so has part: feature:12703-12771:1:region

position:12703:1
position: 12703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12771:1
position: 12771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12703-12771:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Ser
codon recognized: AGY
so part of: sequence
location: 12772..12840
location: region:12772-12840:1
so has part: feature:12772-12840:1:region

position:12772:1
position: 12772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12840:1
position: 12840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12772-12840:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Leu
codon recognized: CUN
so part of: sequence
location: 12842..12914
location: region:12842-12914:1
so has part: feature:12842-12914:1:region

position:12842:1
position: 12842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12914:1
position: 12914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12842-12914:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 75352
gene: ND5
so part of: sequence
location: 12915..14750
location: region:12915-14750:1
so has part: feature:12915-14750:1:exon
subclass of: SO_0000010

5912291
type: Gene
SIO_000068: ncbigene

position:12915:1
position: 12915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14750:1
position: 14750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12915-14750:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75352
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MNPTTLIMSSSLILVITILMFPLLTTLSPKPQKPEWASTHVKTAVSTSFFISLLPLMIFLDQGMESITTNWQWMNTHMFDTNISFKFDHYSLIFTPIALYVTWSILEFALWYMHSDPNMNRFFKYLLLFLVAMITLVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILSMAWFAMNLNSWEIQQIFFLSKNFDMTIPLIGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNNLALTICLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHNLMPATSTYLTIGSLALTGTPFLAGFFSKDAIIEALNTSYLNAWALTLTLIATSFTAVYSFRVVFFVTMGSPRFLPLSPINENNPLVINPIKRLAWGSIIAGLIITSNFLPSKTPIMTMPTTLKLAALMVTITGLLVAMELTAMTNKQVKITPTIPLHHFSNMLGYFPAMIHRLPPKLNLTLGQSIATKLDQTWLEITGPKGLALTQMMMSKVTSDIQRGMIKTYLTIFLLTLTLAILLTLI
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 12915..14750
location: region:12915-14750:1
so has part: feature:12915-14750:1:exon

YP_001686734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12915-14750:1:exon

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 75352
gene: ND6
so part of: sequence
location: complement(14747..15268)
location: region:14747-15268:-1
so has part: feature:14747-15268:-1:exon
subclass of: SO_0000010

5912293
type: Gene
SIO_000068: ncbigene

position:14747:-1
position: 14747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15268:-1
position: 15268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14747-15268:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75352
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MTYFMFLLLVALVVGLVAVASNPTPYFAALGLVVAAGVGCGILVGYGGSFLSLVLFLIYLGGMLVVFAYSAALAAEPFPEAWGSRSVAGYVLVYLLGVVLAAGLFWGGWYEGSWVVVDGLKEFSMLRGDVSGVAVMYSFGGAMLVICAWVLLLTLLVVLELTRGLSRGTLRAV
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(14747..15268)
location: region:14747-15268:-1
so has part: feature:14747-15268:-1:exon

YP_001686735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14747-15268:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Glu
so part of: sequence
location: complement(15269..15337)
location: region:15269-15337:-1
so has part: feature:15269-15337:-1:region

position:15269:-1
position: 15269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15337:-1
position: 15337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15269-15337:-1:region

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 75352
gene: CYTB
so part of: sequence
location: 15342..16482
location: region:15342-16482:1
so has part: feature:15342-16482:1:exon
subclass of: SO_0000010

5912300
type: Gene
SIO_000068: ncbigene

position:15342:1
position: 15342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16482:1
position: 16482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15342-16482:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75352
gene: CYTB
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:16482,aa:TERM)
transl table: 2
product: cytochrome b
translation: MASLRKTHPLMKIANDALVDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGWLIRNIHANGASFFFICIYMHIARGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGDTLVQWIWGGFSVDNATLTRFFAFHFLLPFVVAAATLLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVVMLLALTSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLFWTLVADMIILTWIGGMPVEHPYIIIGQVASVLYFALFLILSPLAGWVENKALKWA
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 15342..16482
location: region:15342-16482:1
so has part: feature:15342-16482:1:exon

YP_001686736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15342-16482:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Thr
so part of: sequence
location: 16483..16554
location: region:16483-16554:1
so has part: feature:16483-16554:1:region

position:16483:1
position: 16483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16554:1
position: 16554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16483-16554:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75352
product: tRNA-Pro
so part of: sequence
location: complement(16554..16623)
location: region:16554-16623:-1
so has part: feature:16554-16623:-1:region

position:16554:-1
position: 16554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16623:-1
position: 16623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16554-16623:-1:region