Scatophagus argus isolate fScaArg1 mitochondrion, complete genome.
type: Entry
definition: Scatophagus argus isolate fScaArg1 mitochondrion, complete genome.
sequence version: NC_059324.1
sequence date: 2023-04-04
sequence: sequence
division: CON
label: NC_059324.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
dblink: SAMN12623616
keyword: RefSeq
source: mitochondrion Scatophagus argus
organism: Scatophagus argus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Scatophagidae; Scatophagus.
reference: 1
reference: 2
reference: 3
comment: PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM035598.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 16-JUL-2021\nAssembly Method :: falcon-kit v. 1.3.0; FALCON-Unzip v.\n 1.2.0; purge_dups v. 1.2.3; scaff10X v.\n 4.2; bionano Solve v. Solve3.5_12162019;\n Salsa2 HiC v. 2.2; Longranger Align v.\n 2.2.2; pbmm2 v. 1.4.0; gcpp v.\n 1.0.0-1807624; bcftools v.\n 1.12-21-ga865a16; merfin v. 09c026d;\n deepvariant v. 1.1.0; gEVAL manual\n curation v. 2021-07-16\nAssembly Name :: fScaArg1.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 92.59x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16771
topology: circular
so has quality: SO_0000988
location: 1..16771
location: region:1-16771:1
RO_0002162: 75038

NC_059324
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

SAMN12623616
type: BioSample
SIO_000068: biosample

1
title: Scatophagus argus (Spotted scat) genome, fScaArg1, primary haplotype
author: Myers, G.
author: Pippel, M.
author: Wrinkler, S.
author: Tracey, A.
author: Sims, Y.
author: Wood, J.
author: Fedrigo, O.
author: Bryappa, V.
author: Jarvis, E.D.
author: Durbin, R.
journal: Unpublished

2
title: Direct Submission
journal: Submitted (01-DEC-2021) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Myers, G.
author: Pippel, M.
author: Wrinkler, S.
author: Tracey, A.
author: Sims, Y.
author: Wood, J.
author: Fedrigo, O.
author: Bryappa, V.
author: Jarvis, E.D.
author: Durbin, R.
journal: Submitted (04-OCT-2021) Vertebrate Genomes Project, G10K, 1230 York Avenue, New York, NY 10065, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16771:1
position: 16771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16771:1:source
so part of: sequence
organism: Scatophagus argus
organelle: mitochondrion
mol type: genomic DNA
isolate: fScaArg1
tissue type: muscle
dev stage: adult
country: Singapore
lat lon: 1.3521 N 103.8198 E
collection date: 2018-08-06
collected by: Byrappa Venkatesh

75038
type: Taxonomy
SIO_000068: taxonomy

LRP43_mgt01
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt01
so part of: sequence
location: 1..68
location: region:1-68:1
so has part: feature:1-68:1:exon
subclass of: SO_0000663

68929132
type: Gene
SIO_000068: ncbigene

position:68:1
position: 68
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-68:1:exon

LRP43_mgt01
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt01
product: tRNA-Phe
anticodon: (pos:31..33,aa:Phe,seq:gaa)
SIO_010081: LRP43_mgt01
subclass of: SO_0000673
so part of: LRP43_mgt01
location: 1..68
location: region:1-68:1
so has part: feature:1-68:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-68:1:exon

LRP43_mgr02
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgr02
so part of: sequence
location: 69..1021
location: region:69-1021:1
so has part: feature:69-1021:1:exon
subclass of: SO_0000573

68929133
type: Gene
SIO_000068: ncbigene

position:69:1
position: 69
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021:1
position: 1021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69-1021:1:exon

LRP43_mgr02
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 75038
locus tag: LRP43_mgr02
product: 12S ribosomal RNA
SIO_010081: LRP43_mgr02
subclass of: SO_0000673
so part of: LRP43_mgr02
location: 69..1021
location: region:69-1021:1
so has part: feature:69-1021:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:69-1021:1:exon

LRP43_mgt02
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt02
so part of: sequence
location: 1022..1093
location: region:1022-1093:1
so has part: feature:1022-1093:1:exon
subclass of: SO_0000663

68929134
type: Gene
SIO_000068: ncbigene

position:1022:1
position: 1022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093:1
position: 1093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1022-1093:1:exon

LRP43_mgt02
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt02
product: tRNA-Val
anticodon: (pos:1055..1057,aa:Val,seq:tac)
SIO_010081: LRP43_mgt02
subclass of: SO_0000673
so part of: LRP43_mgt02
location: 1022..1093
location: region:1022-1093:1
so has part: feature:1022-1093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1022-1093:1:exon

LRP43_mgr01
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgr01
so part of: sequence
location: 1094..2802
location: region:1094-2802:1
so has part: feature:1094-2802:1:exon
subclass of: SO_0000573

68929135
type: Gene
SIO_000068: ncbigene

position:1094:1
position: 1094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2802:1
position: 2802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1094-2802:1:exon

LRP43_mgr01
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 75038
locus tag: LRP43_mgr01
product: 16S ribosomal RNA
SIO_010081: LRP43_mgr01
subclass of: SO_0000673
so part of: LRP43_mgr01
location: 1094..2802
location: region:1094-2802:1
so has part: feature:1094-2802:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1094-2802:1:exon

LRP43_mgt03
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt03
so part of: sequence
location: 2803..2876
location: region:2803-2876:1
so has part: feature:2803-2876:1:exon
subclass of: SO_0000663

68929136
type: Gene
SIO_000068: ncbigene

position:2803:1
position: 2803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2876:1
position: 2876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2803-2876:1:exon

LRP43_mgt03
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt03
product: tRNA-Leu
anticodon: (pos:2838..2840,aa:Leu,seq:taa)
SIO_010081: LRP43_mgt03
subclass of: SO_0000673
so part of: LRP43_mgt03
location: 2803..2876
location: region:2803-2876:1
so has part: feature:2803-2876:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2803-2876:1:exon

LRP43_mgp13
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
gene: ND1
locus tag: LRP43_mgp13
so part of: sequence
location: 2947..3921
location: region:2947-3921:1
so has part: feature:2947-3921:1:exon
subclass of: SO_0000010

68929137
type: Gene
SIO_000068: ncbigene

position:2947:1
position: 2947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3921:1
position: 3921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2947-3921:1:exon

LRP43_mgp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75038
gene: ND1
locus tag: LRP43_mgp13
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MLSTLITHLINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTSSPILFLFTPMLALTLALMMWAPMPLPYPVVDLNLGILFVLTLSSLAAYSILGSGWASNSKYALMGALRAVAQTISYEVSLGLILLVAIIFTGGFALQTFNTTQEAVWLILPLWPLAAMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLMNTLSTILFLGACHIPALPEITSMNLMTKAALLSVVFLWLRASYPRFRYDQLMHLTWKNYLPLTLALIIWHLALPIAFAGLPPQL
SIO_010081: LRP43_mgp13
subclass of: SO_0000673
so part of: LRP43_mgp13
location: 2947..3921
location: region:2947-3921:1
so has part: feature:2947-3921:1:exon

YP_010229076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2947-3921:1:exon

LRP43_mgt04
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt04
so part of: sequence
location: 3926..3995
location: region:3926-3995:1
so has part: feature:3926-3995:1:exon
subclass of: SO_0000663

68929119
type: Gene
SIO_000068: ncbigene

position:3926:1
position: 3926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3995:1
position: 3995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3926-3995:1:exon

LRP43_mgt04
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt04
product: tRNA-Ile
anticodon: (pos:3956..3958,aa:Ile,seq:gat)
SIO_010081: LRP43_mgt04
subclass of: SO_0000673
so part of: LRP43_mgt04
location: 3926..3995
location: region:3926-3995:1
so has part: feature:3926-3995:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3926-3995:1:exon

LRP43_mgt05
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt05
so part of: sequence
location: complement(4004..4075)
location: region:4004-4075:-1
so has part: feature:4004-4075:-1:exon
subclass of: SO_0000663

68929138
type: Gene
SIO_000068: ncbigene

position:4004:-1
position: 4004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4075:-1
position: 4075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4004-4075:-1:exon

LRP43_mgt05
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt05
product: tRNA-Gln
anticodon: (pos:complement(4040..4042),aa:Gln,seq:ttg)
SIO_010081: LRP43_mgt05
subclass of: SO_0000673
so part of: LRP43_mgt05
location: complement(4004..4075)
location: region:4004-4075:-1
so has part: feature:4004-4075:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4004-4075:-1:exon

LRP43_mgt06
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt06
so part of: sequence
location: 4075..4143
location: region:4075-4143:1
so has part: feature:4075-4143:1:exon
subclass of: SO_0000663

68929139
type: Gene
SIO_000068: ncbigene

position:4075:1
position: 4075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4143:1
position: 4143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4075-4143:1:exon

LRP43_mgt06
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt06
product: tRNA-Met
anticodon: (pos:4105..4107,aa:Met,seq:cat)
SIO_010081: LRP43_mgt06
subclass of: SO_0000673
so part of: LRP43_mgt06
location: 4075..4143
location: region:4075-4143:1
so has part: feature:4075-4143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4075-4143:1:exon

LRP43_mgp12
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
gene: ND2
locus tag: LRP43_mgp12
so part of: sequence
location: 4145..5189
location: region:4145-5189:1
so has part: feature:4145-5189:1:exon
subclass of: SO_0000010

68929140
type: Gene
SIO_000068: ncbigene

position:4145:1
position: 4145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5189:1
position: 5189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4145-5189:1:exon

LRP43_mgp12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75038
gene: ND2
locus tag: LRP43_mgp12
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:5189,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPYILATLLFGLGLGTTITFASSHWLLAWMGLEINTLAILPLMAQHHHPRAVEATIKYFLVQATAAATLLFAATTNAWLTGQWNIQYASHPLTITLIITALALKIGLAPLHAWLPDVLQGLDLTTGLILSTWQKLAPFALLLQLTPSNSPILVMLGLISTLVGGWGGLNQTQLRKILAYSSIAHLGWMILILQFSPSLTFLTLVVYLIMTSSVFLTFILVKATNITSLAISWTKAPILTSLIPLTLLSLGGLPPLTGFMPKWLILQELTKQDLAPTATIAALSALLSLYFYLRLSYAMTLTLSPNNLTGVAPWRLSSPRPTLPLAILTMTAVTLLPLTPAMAALFIF
SIO_010081: LRP43_mgp12
subclass of: SO_0000673
so part of: LRP43_mgp12
location: 4145..5189
location: region:4145-5189:1
so has part: feature:4145-5189:1:exon

YP_010229077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4145-5189:1:exon

LRP43_mgt07
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt07
so part of: sequence
location: 5190..5261
location: region:5190-5261:1
so has part: feature:5190-5261:1:exon
subclass of: SO_0000663

68929120
type: Gene
SIO_000068: ncbigene

position:5190:1
position: 5190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5261:1
position: 5261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5190-5261:1:exon

LRP43_mgt07
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt07
product: tRNA-Trp
anticodon: (pos:5223..5225,aa:Trp,seq:tca)
SIO_010081: LRP43_mgt07
subclass of: SO_0000673
so part of: LRP43_mgt07
location: 5190..5261
location: region:5190-5261:1
so has part: feature:5190-5261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5190-5261:1:exon

LRP43_mgt08
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt08
so part of: sequence
location: complement(5262..5330)
location: region:5262-5330:-1
so has part: feature:5262-5330:-1:exon
subclass of: SO_0000663

68929141
type: Gene
SIO_000068: ncbigene

position:5262:-1
position: 5262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5330:-1
position: 5330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5262-5330:-1:exon

LRP43_mgt08
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt08
product: tRNA-Ala
anticodon: (pos:complement(5298..5300),aa:Ala,seq:tgc)
SIO_010081: LRP43_mgt08
subclass of: SO_0000673
so part of: LRP43_mgt08
location: complement(5262..5330)
location: region:5262-5330:-1
so has part: feature:5262-5330:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5262-5330:-1:exon

LRP43_mgt09
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt09
so part of: sequence
location: complement(5334..5406)
location: region:5334-5406:-1
so has part: feature:5334-5406:-1:exon
subclass of: SO_0000663

68929142
type: Gene
SIO_000068: ncbigene

position:5334:-1
position: 5334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5406:-1
position: 5406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5334-5406:-1:exon

LRP43_mgt09
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt09
product: tRNA-Asn
anticodon: (pos:complement(5371..5373),aa:Asn,seq:gtt)
SIO_010081: LRP43_mgt09
subclass of: SO_0000673
so part of: LRP43_mgt09
location: complement(5334..5406)
location: region:5334-5406:-1
so has part: feature:5334-5406:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5334-5406:-1:exon

LRP43_mgt10
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt10
so part of: sequence
location: complement(5443..5509)
location: region:5443-5509:-1
so has part: feature:5443-5509:-1:exon
subclass of: SO_0000663

68929143
type: Gene
SIO_000068: ncbigene

position:5443:-1
position: 5443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5509:-1
position: 5509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5443-5509:-1:exon

LRP43_mgt10
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt10
product: tRNA-Cys
anticodon: (pos:complement(5479..5481),aa:Cys,seq:gca)
SIO_010081: LRP43_mgt10
subclass of: SO_0000673
so part of: LRP43_mgt10
location: complement(5443..5509)
location: region:5443-5509:-1
so has part: feature:5443-5509:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5443-5509:-1:exon

LRP43_mgt11
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt11
so part of: sequence
location: complement(5510..5579)
location: region:5510-5579:-1
so has part: feature:5510-5579:-1:exon
subclass of: SO_0000663

68929144
type: Gene
SIO_000068: ncbigene

position:5510:-1
position: 5510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5579:-1
position: 5579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5510-5579:-1:exon

LRP43_mgt11
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt11
product: tRNA-Tyr
anticodon: (pos:complement(5546..5548),aa:Tyr,seq:gta)
SIO_010081: LRP43_mgt11
subclass of: SO_0000673
so part of: LRP43_mgt11
location: complement(5510..5579)
location: region:5510-5579:-1
so has part: feature:5510-5579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5510-5579:-1:exon

LRP43_mgp11
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
gene: COI
locus tag: LRP43_mgp11
so part of: sequence
location: 5581..7143
location: region:5581-7143:1
so has part: feature:5581-7143:1:exon
subclass of: SO_0000010

68929145
type: Gene
SIO_000068: ncbigene

position:5581:1
position: 5581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7143:1
position: 7143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5581-7143:1:exon

LRP43_mgp11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75038
gene: COI
locus tag: LRP43_mgp11
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MAIARWFFSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKSPAASQYQTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLYGGTIKWETPLLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIVAAFVHWFPLLSGYTLHETWTKIHFGIMFAGVNLTFFPQHFLGLAGMPRRYSDYPDAYVLWNTVSSIGSLISLVAVILFLFIIWEAFAAKREVLSVEMTSTNIEWLHGCPPPYHTFEEPAFVQIQSYSNRE
SIO_010081: LRP43_mgp11
subclass of: SO_0000673
so part of: LRP43_mgp11
location: 5581..7143
location: region:5581-7143:1
so has part: feature:5581-7143:1:exon

YP_010229078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5581-7143:1:exon

LRP43_mgt12
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt12
so part of: sequence
location: complement(7135..7205)
location: region:7135-7205:-1
so has part: feature:7135-7205:-1:exon
subclass of: SO_0000663

68929121
type: Gene
SIO_000068: ncbigene

position:7135:-1
position: 7135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7205:-1
position: 7205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7135-7205:-1:exon

LRP43_mgt12
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt12
product: tRNA-Ser
anticodon: (pos:complement(7171..7173),aa:Ser,seq:tga)
SIO_010081: LRP43_mgt12
subclass of: SO_0000673
so part of: LRP43_mgt12
location: complement(7135..7205)
location: region:7135-7205:-1
so has part: feature:7135-7205:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7135-7205:-1:exon

LRP43_mgt13
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt13
so part of: sequence
location: 7209..7280
location: region:7209-7280:1
so has part: feature:7209-7280:1:exon
subclass of: SO_0000663

68929146
type: Gene
SIO_000068: ncbigene

position:7209:1
position: 7209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7280:1
position: 7280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7209-7280:1:exon

LRP43_mgt13
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt13
product: tRNA-Asp
anticodon: (pos:7242..7244,aa:Asp,seq:gtc)
SIO_010081: LRP43_mgt13
subclass of: SO_0000673
so part of: LRP43_mgt13
location: 7209..7280
location: region:7209-7280:1
so has part: feature:7209-7280:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7209-7280:1:exon

LRP43_mgp10
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
gene: COII
locus tag: LRP43_mgp10
so part of: sequence
location: 7287..7977
location: region:7287-7977:1
so has part: feature:7287-7977:1:exon
subclass of: SO_0000010

68929147
type: Gene
SIO_000068: ncbigene

position:7287:1
position: 7287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7977:1
position: 7977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7287-7977:1:exon

LRP43_mgp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75038
gene: COII
locus tag: LRP43_mgp10
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:7977,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPSQLGFQDAHSPLMEELLHFHDHALMIVFLISTFVLYIITAMVAVKLTNKHITDSQEIEMIWTILPAFILILIALPSLRILYLMDEINDPHLTIKAVGHQWYWSYEYTDYENLEFDSYMIPTQDLSPGQFRLLEADHRMVVPVESPIRILISAEDVLHSWAVPTLGVKMDAIPGRLNQTTFITTSPGVFYGQCSEICGANHSFMPIVIEAVPLKHFENWLSLVLEET
SIO_010081: LRP43_mgp10
subclass of: SO_0000673
so part of: LRP43_mgp10
location: 7287..7977
location: region:7287-7977:1
so has part: feature:7287-7977:1:exon

YP_010229079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7287-7977:1:exon

LRP43_mgt14
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt14
so part of: sequence
location: 7978..8052
location: region:7978-8052:1
so has part: feature:7978-8052:1:exon
subclass of: SO_0000663

68929122
type: Gene
SIO_000068: ncbigene

position:7978:1
position: 7978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8052:1
position: 8052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7978-8052:1:exon

LRP43_mgt14
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt14
product: tRNA-Lys
anticodon: (pos:8013..8015,aa:Lys,seq:ttt)
SIO_010081: LRP43_mgt14
subclass of: SO_0000673
so part of: LRP43_mgt14
location: 7978..8052
location: region:7978-8052:1
so has part: feature:7978-8052:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7978-8052:1:exon

LRP43_mgp09
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
gene: ATP8
locus tag: LRP43_mgp09
so part of: sequence
location: 8055..8222
location: region:8055-8222:1
so has part: feature:8055-8222:1:exon
subclass of: SO_0000010

68929148
type: Gene
SIO_000068: ncbigene

position:8055:1
position: 8055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8222:1
position: 8222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8055-8222:1:exon

LRP43_mgp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75038
gene: ATP8
locus tag: LRP43_mgp09
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLDPSPWFLILALSWSAFLTIIPAKLLRHTSLNTITHQHAQERPTTSWTWPWH
SIO_010081: LRP43_mgp09
subclass of: SO_0000673
so part of: LRP43_mgp09
location: 8055..8222
location: region:8055-8222:1
so has part: feature:8055-8222:1:exon

YP_010229080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8055-8222:1:exon

LRP43_mgp08
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
gene: ATP6
locus tag: LRP43_mgp08
so part of: sequence
location: 8213..8896
location: region:8213-8896:1
so has part: feature:8213-8896:1:exon
subclass of: SO_0000010

68929123
type: Gene
SIO_000068: ncbigene

position:8213:1
position: 8213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8896:1
position: 8896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8213-8896:1:exon

LRP43_mgp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75038
gene: ATP6
locus tag: LRP43_mgp08
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MALNLFDQFMSPTYLGIPLVALAIFLPWLLFPTPSSRWLNNRLLTLQNWFVTRFTQQLLLPLNTGGHKWALLFASLMLFLIAMNMLGLLPYTFTPTTQLSLNMGFAVPLWLATVLIGLRNQPTVALGHLLPEGTPAPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLISTATFVLLPMMPTVAIFTVTLLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV
SIO_010081: LRP43_mgp08
subclass of: SO_0000673
so part of: LRP43_mgp08
location: 8213..8896
location: region:8213-8896:1
so has part: feature:8213-8896:1:exon

YP_010229081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8213-8896:1:exon

LRP43_mgp07
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
gene: COIII
locus tag: LRP43_mgp07
so part of: sequence
location: 8896..9680
location: region:8896-9680:1
so has part: feature:8896-9680:1:exon
subclass of: SO_0000010

68929124
type: Gene
SIO_000068: ncbigene

position:9680:1
position: 9680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8896-9680:1:exon

LRP43_mgp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75038
gene: COIII
locus tag: LRP43_mgp07
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9679..9680,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHAYHMVDPSPWPLTGAIAALLMTSGLAVWFHFNITTLMALGLVLLILTMIQWWRDIVREGTFQGHHTPPVQKGLRYGMMLFIASEVFFFLGFFWAFYHSSLAPTPELGGAWPPTGITVLNPFEVPLLNTIVLIASGVTVTWAHHSIMEKERKQAIHALFLTILLGLYFTLLQAMEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCFLRQVQYHFTSDHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS
SIO_010081: LRP43_mgp07
subclass of: SO_0000673
so part of: LRP43_mgp07
location: 8896..9680
location: region:8896-9680:1
so has part: feature:8896-9680:1:exon

YP_010229082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8896-9680:1:exon

LRP43_mgt15
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt15
so part of: sequence
location: 9681..9750
location: region:9681-9750:1
so has part: feature:9681-9750:1:exon
subclass of: SO_0000663

68929125
type: Gene
SIO_000068: ncbigene

position:9681:1
position: 9681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9750:1
position: 9750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9681-9750:1:exon

LRP43_mgt15
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt15
product: tRNA-Gly
anticodon: (pos:9712..9714,aa:Gly,seq:tcc)
SIO_010081: LRP43_mgt15
subclass of: SO_0000673
so part of: LRP43_mgt15
location: 9681..9750
location: region:9681-9750:1
so has part: feature:9681-9750:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9681-9750:1:exon

LRP43_mgp06
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
gene: ND3
locus tag: LRP43_mgp06
so part of: sequence
location: 9751..10099
location: region:9751-10099:1
so has part: feature:9751-10099:1:exon
subclass of: SO_0000010

68929149
type: Gene
SIO_000068: ncbigene

position:9751:1
position: 9751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10099:1
position: 10099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9751-10099:1:exon

LRP43_mgp06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75038
gene: ND3
locus tag: LRP43_mgp06
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:10099,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLIITITAITSILSIILIVVSFWLPQITPDYEKLSPYECGFDPLGTARLPFSIRFFLVAILFLLFDLEIALLLPLPWGNQLMTPLLTFLWALTVLVLLTLGLIYEWLQGGLEWAE
SIO_010081: LRP43_mgp06
subclass of: SO_0000673
so part of: LRP43_mgp06
location: 9751..10099
location: region:9751-10099:1
so has part: feature:9751-10099:1:exon

YP_010229083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9751-10099:1:exon

LRP43_mgt16
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt16
so part of: sequence
location: 10100..10168
location: region:10100-10168:1
so has part: feature:10100-10168:1:exon
subclass of: SO_0000663

68929126
type: Gene
SIO_000068: ncbigene

position:10100:1
position: 10100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10168:1
position: 10168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10100-10168:1:exon

LRP43_mgt16
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt16
product: tRNA-Arg
anticodon: (pos:10130..10132,aa:Arg,seq:tcg)
SIO_010081: LRP43_mgt16
subclass of: SO_0000673
so part of: LRP43_mgt16
location: 10100..10168
location: region:10100-10168:1
so has part: feature:10100-10168:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10100-10168:1:exon

LRP43_mgp05
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
gene: ND4L
locus tag: LRP43_mgp05
so part of: sequence
location: 10169..10465
location: region:10169-10465:1
so has part: feature:10169-10465:1:exon
subclass of: SO_0000010

68929150
type: Gene
SIO_000068: ncbigene

position:10169:1
position: 10169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10465:1
position: 10465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10169-10465:1:exon

LRP43_mgp05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75038
gene: ND4L
locus tag: LRP43_mgp05
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MAPPHFTFSSAFMLGLMGLAFNRTHLLSALLCLECMMLALFLAISLWTLQLTSTNFTAAPMFLLAFSACEAAAGLALMVASARTHGTDRLQNLNLLQC
SIO_010081: LRP43_mgp05
subclass of: SO_0000673
so part of: LRP43_mgp05
location: 10169..10465
location: region:10169-10465:1
so has part: feature:10169-10465:1:exon

YP_010229084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10169-10465:1:exon

LRP43_mgp04
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
gene: ND4
locus tag: LRP43_mgp04
so part of: sequence
location: 10459..11845
location: region:10459-11845:1
so has part: feature:10459-11845:1:exon
subclass of: SO_0000010

68929127
type: Gene
SIO_000068: ncbigene

position:10459:1
position: 10459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11845:1
position: 11845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10459-11845:1:exon

LRP43_mgp04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75038
gene: ND4
locus tag: LRP43_mgp04
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11845,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKILIPTIMLIPMIWTTPAKWLWMTSLLHSLTIALLSLSWLKNLQETGWLALNHYLATDLVSTPLLILTCWLLPLMILASQNHMAPEPINRQRMYITLLTSLQIFLILAFGATELMLFFIMFEATLVPTLMLITRWGNQAERLNAGIYFLFYTLAGSLPLLVALLILQNNMNSLSLLVLQFHNPVHLTSLSDYVWWIGCTAAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGLIRMASVLGPAPKELSYPFISLALWGLIMTGSTCLRQLDMKALVAYSSVSHMGLVVGGVLIQTAWGLSGALILMIAHGLTSSSLFCLVNTVYERVHSRTMMLVRGLQMILPLMTLWWFIASLANLALPPLPNFMAELMVMSSLFNWSHWTLILTGAGMTITAGYTLYMFISTQWGTPPKFLPTLEPTHSREHLLMALHLVPLLLLILKPDLIGGLWMAM
SIO_010081: LRP43_mgp04
subclass of: SO_0000673
so part of: LRP43_mgp04
location: 10459..11845
location: region:10459-11845:1
so has part: feature:10459-11845:1:exon

YP_010229085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10459-11845:1:exon

LRP43_mgt17
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt17
so part of: sequence
location: 11846..11914
location: region:11846-11914:1
so has part: feature:11846-11914:1:exon
subclass of: SO_0000663

68929128
type: Gene
SIO_000068: ncbigene

position:11846:1
position: 11846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11914:1
position: 11914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11846-11914:1:exon

LRP43_mgt17
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt17
product: tRNA-His
anticodon: (pos:11876..11878,aa:His,seq:gtg)
SIO_010081: LRP43_mgt17
subclass of: SO_0000673
so part of: LRP43_mgt17
location: 11846..11914
location: region:11846-11914:1
so has part: feature:11846-11914:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11846-11914:1:exon

LRP43_mgt18
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt18
so part of: sequence
location: 11915..11982
location: region:11915-11982:1
so has part: feature:11915-11982:1:exon
subclass of: SO_0000663

68929151
type: Gene
SIO_000068: ncbigene

position:11915:1
position: 11915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11982:1
position: 11982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11915-11982:1:exon

LRP43_mgt18
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt18
product: tRNA-Ser
anticodon: (pos:11942..11944,aa:Ser,seq:gct)
SIO_010081: LRP43_mgt18
subclass of: SO_0000673
so part of: LRP43_mgt18
location: 11915..11982
location: region:11915-11982:1
so has part: feature:11915-11982:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11915-11982:1:exon

LRP43_mgt19
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt19
so part of: sequence
location: 11986..12057
location: region:11986-12057:1
so has part: feature:11986-12057:1:exon
subclass of: SO_0000663

68929152
type: Gene
SIO_000068: ncbigene

position:11986:1
position: 11986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12057:1
position: 12057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11986-12057:1:exon

LRP43_mgt19
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt19
product: tRNA-Leu
anticodon: (pos:12018..12020,aa:Leu,seq:tag)
SIO_010081: LRP43_mgt19
subclass of: SO_0000673
so part of: LRP43_mgt19
location: 11986..12057
location: region:11986-12057:1
so has part: feature:11986-12057:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11986-12057:1:exon

LRP43_mgp03
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
gene: ND5
locus tag: LRP43_mgp03
so part of: sequence
location: 12058..13896
location: region:12058-13896:1
so has part: feature:12058-13896:1:exon
subclass of: SO_0000010

68929153
type: Gene
SIO_000068: ncbigene

position:12058:1
position: 12058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13896:1
position: 13896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12058-13896:1:exon

LRP43_mgp03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75038
gene: ND5
locus tag: LRP43_mgp03
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MNSTSIFLSSSLIIILTLLTYPLLTTLNINTPKENWALSQVKTAVKLAFFTSLLPLFLFLNEGTETIVTTWNWLNILTFDINVSFKFDCYSIIFTPVALYVTWSILEFASWYMAADPHMNRFFKYLLIFLIAMLILVTANNMFQLFIGWEGVGIMSFLLIGWWSGRTDANAAALQAVLYNRIGDVGLVLAMAWLAMKTNSWEFQQMFMSSKDLDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRMSPLMENNPTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGTHNLAPFTSSCLTIGSLALTGTPFLAGFFSKDAIIESLNTSYLNAWALTLTLLATSFTAIYSLRVIFFVAMGHPRFNSLSPINENNPSVINPLKRLAWGSIIAGLLITSNISPLKTPIMTMPPLLKMAALAVSIAGLLLALELASLTNKQFKATPKLALHHFSNMLGFFPPVIHRFMPKLNLTFGQMVATQMVDQNWLEKIGPAATATLNASPITTTSNIQQGMIKTYLALFLLTFLLLALVMSL
SIO_010081: LRP43_mgp03
subclass of: SO_0000673
so part of: LRP43_mgp03
location: 12058..13896
location: region:12058-13896:1
so has part: feature:12058-13896:1:exon

YP_010229086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12058-13896:1:exon

LRP43_mgp02
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
gene: ND6
locus tag: LRP43_mgp02
so part of: sequence
location: complement(13893..14414)
location: region:13893-14414:-1
so has part: feature:13893-14414:-1:exon
subclass of: SO_0000010

68929129
type: Gene
SIO_000068: ncbigene

position:13893:-1
position: 13893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14414:-1
position: 14414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13893-14414:-1:exon

LRP43_mgp02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75038
gene: ND6
locus tag: LRP43_mgp02
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MTWVFYLFLGGVVLGAMAVASNPSPHYSAFGMVFVAGCGGVLLMSQGMIFLGMLLFLIYLGGMLIVFMFANALASEAHPMAWGSQGAGFSAGVYTCIVALAYVMLGEGWGGFFWHSVEELNGFSMFRGDLGGVALMYSMGGGMLVISAWVLLLTLFVVLELTRGLSRGALRAV
SIO_010081: LRP43_mgp02
subclass of: SO_0000673
so part of: LRP43_mgp02
location: complement(13893..14414)
location: region:13893-14414:-1
so has part: feature:13893-14414:-1:exon

YP_010229087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13893-14414:-1:exon

LRP43_mgt20
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt20
so part of: sequence
location: complement(14419..14487)
location: region:14419-14487:-1
so has part: feature:14419-14487:-1:exon
subclass of: SO_0000663

68929130
type: Gene
SIO_000068: ncbigene

position:14419:-1
position: 14419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14487:-1
position: 14487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14419-14487:-1:exon

LRP43_mgt20
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt20
product: tRNA-Glu
anticodon: (pos:complement(14455..14457),aa:Glu,seq:ttc)
SIO_010081: LRP43_mgt20
subclass of: SO_0000673
so part of: LRP43_mgt20
location: complement(14419..14487)
location: region:14419-14487:-1
so has part: feature:14419-14487:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14419-14487:-1:exon

LRP43_mgp01
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
gene: CYTB
locus tag: LRP43_mgp01
so part of: sequence
location: 14492..15634
location: region:14492-15634:1
so has part: feature:14492-15634:1:exon
subclass of: SO_0000010

68929154
type: Gene
SIO_000068: ncbigene

position:14492:1
position: 14492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15634:1
position: 15634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14492-15634:1:exon

LRP43_mgp01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 75038
gene: CYTB
locus tag: LRP43_mgp01
codon start: 1
transl table: 2
product: cytochrome b
translation: MASIRKTHPLLKIVNNSLIDLPTPVNISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNLHANGASFFFICLYLHIGRGLYYGSFLYKETWNTGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFTFHFLLPFIIAAVVMLHLLFLHETGSNNPLGLNSDTDKIPFHPYFTYKDLLGFAIVLLALTSLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMVVPALHTSKQRSLVFRPFTQFLFWTLIANVAILTWIGGMPVEYPFIIIGQIASLLYFALFLLIIPLTGWLENKTLSWA
SIO_010081: LRP43_mgp01
subclass of: SO_0000673
so part of: LRP43_mgp01
location: 14492..15634
location: region:14492-15634:1
so has part: feature:14492-15634:1:exon

YP_010229088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14492-15634:1:exon

LRP43_mgt21
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt21
so part of: sequence
location: 15635..15706
location: region:15635-15706:1
so has part: feature:15635-15706:1:exon
subclass of: SO_0000663

68929131
type: Gene
SIO_000068: ncbigene

position:15635:1
position: 15635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15706:1
position: 15706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15635-15706:1:exon

LRP43_mgt21
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt21
product: tRNA-Thr
anticodon: (pos:15667..15669,aa:Thr,seq:tgt)
SIO_010081: LRP43_mgt21
subclass of: SO_0000673
so part of: LRP43_mgt21
location: 15635..15706
location: region:15635-15706:1
so has part: feature:15635-15706:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15635-15706:1:exon

LRP43_mgt22
type: Gene
subclass of: SO_0000704
RO_0002162: 75038
locus tag: LRP43_mgt22
so part of: sequence
location: complement(15706..15776)
location: region:15706-15776:-1
so has part: feature:15706-15776:-1:exon
subclass of: SO_0000663

68929155
type: Gene
SIO_000068: ncbigene

position:15706:-1
position: 15706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15776:-1
position: 15776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15706-15776:-1:exon

LRP43_mgt22
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 75038
locus tag: LRP43_mgt22
product: tRNA-Pro
anticodon: (pos:complement(15742..15744),aa:Pro,seq:tgg)
SIO_010081: LRP43_mgt22
subclass of: SO_0000673
so part of: LRP43_mgt22
location: complement(15706..15776)
location: region:15706-15776:-1
so has part: feature:15706-15776:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15706-15776:-1:exon

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 75038
so part of: sequence
location: 15777..16771
location: region:15777-16771:1
so has part: feature:15777-16771:1:region

position:15777:1
position: 15777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15777-16771:1:region